Overview

ID MAG05361
Name SRR25158458_bin.5
Sample SMP0174
Taxonomy
Kingdom Bacteria
Phylum Patescibacteriota
Class Saccharimonadia
Order Saccharimonadales
Family EFPC-124
Genus DATIBO01
Species
Assembly information
Completeness (%) 75.79
Contamination (%) 1.42
GC content (%) 49.0
N50 (bp) 7,309
Genome size (bp) 694,076

Location

Module

Module ID Module name Total genes Total steps Contain genes Contain steps Percentage of genes Percentage of steps

Genes531

Gene name Description KEGG GOs EC E-value Score Sequence
SRR25158458_k127_1070574_0 ATP dependent DNA ligase C terminal region K01971 - 6.5.1.1 2.971e-212 680.0
SRR25158458_k127_1070574_1 PFAM transposase, IS4 family protein - - - 0.0000000000000000000000000000000000000000000008371 170.0
SRR25158458_k127_1070574_2 Transposase - - - 0.00000000000000000000000004387 114.0
SRR25158458_k127_1070574_3 SNARE associated Golgi protein K01077 - 3.1.3.1 0.00000003397 63.0
SRR25158458_k127_1091662_0 FemAB family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003647 287.0
SRR25158458_k127_1091662_1 Methicillin resistance protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000611 286.0
SRR25158458_k127_1091662_2 Catalyzes the addition of an amino acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan K01928 - 6.3.2.13 0.0000000005405 62.0
SRR25158458_k127_1128973_0 PFAM glycosyl transferase group 1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002522 324.0
SRR25158458_k127_1128973_1 PFAM sugar transferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000003821 252.0
SRR25158458_k127_1128973_2 Mannose-1-phosphate guanylyltransferase K00971 - 2.7.7.13 0.0000000000000000000000000000000000000000000000000000000000112 220.0
SRR25158458_k127_1128973_3 domain protein - - - 0.0000000000000000000000000000008136 138.0
SRR25158458_k127_1128973_4 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella - - - 0.000000000000000000000000009873 125.0
SRR25158458_k127_1128973_5 Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair K01356 - 3.4.21.88 0.000000006529 63.0
SRR25158458_k127_1128973_6 NUDIX domain K03574 - 3.6.1.55 0.0000002308 58.0
SRR25158458_k127_1128973_7 COG3307 Lipid A core - O-antigen ligase and related enzymes K18814 - - 0.0001122 54.0
SRR25158458_k127_1128973_8 Belongs to the Nudix hydrolase family K03574 - 3.6.1.55 0.0002378 45.0
SRR25158458_k127_1133636_0 Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits K02112 - 3.6.3.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007067 399.0
SRR25158458_k127_1133636_1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit K02111 - 3.6.3.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000205 323.0
SRR25158458_k127_1133636_2 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex K02115 - - 0.000000002006 68.0
SRR25158458_k127_1133636_3 PFAM ATP synthase, Delta Epsilon chain, beta-sandwich domain K02114 - - 0.0000009244 56.0
SRR25158458_k127_1160075_0 NhaP-type Na H and K H - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000623 290.0
SRR25158458_k127_1160075_1 PFAM Haemolysin-type calcium-binding repeat - - - 0.0000000000000000000000000000000000000000001858 175.0
SRR25158458_k127_1160075_2 Domain of unknown function (DUF5050) - - - 0.0000000000000000001869 101.0
SRR25158458_k127_1160075_3 helix_turn_helix, Arsenical Resistance Operon Repressor K03892 - - 0.0000000000002135 74.0
SRR25158458_k127_1160075_4 repeat protein - - - 0.000000000001793 72.0
SRR25158458_k127_1189965_0 Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs K03177 GO:0001522,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016071,GO:0016556,GO:0016853,GO:0016866,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:1901360,GO:1990481 5.4.99.25 0.000000000000000000000000000000000000000000000001643 181.0
SRR25158458_k127_1189965_1 acetyltransferases and hydrolases with the alpha beta hydrolase fold - - - 0.00000000000000007986 94.0
SRR25158458_k127_1189965_2 DHH family K06881 - 3.1.13.3,3.1.3.7 0.0006834 52.0
SRR25158458_k127_1260454_0 Cytochrome C biogenesis protein transmembrane region - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001141 255.0
SRR25158458_k127_1260454_1 Hsp20/alpha crystallin family K13993 - - 0.000000000000000000000000000000009333 132.0
SRR25158458_k127_1260454_2 Thioredoxin - - - 0.00000000000000000000000000000003097 131.0
SRR25158458_k127_1260454_3 Required for both de novo synthesis of the corrin ring for the assimilation of exogenous corrinoids. Participates in the adenosylation of a variety of incomplete and complete corrinoids K19221 - 2.5.1.17 0.000000000000000000000000001056 119.0
SRR25158458_k127_1260454_4 Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins K03676,K06191 - - 0.000000000000001099 81.0
SRR25158458_k127_1294784_0 Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides K00525 - 1.17.4.1 0.0 1180.0
SRR25158458_k127_1294784_1 Ribonucleotide reductase, small chain K00526 - 1.17.4.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001236 525.0
SRR25158458_k127_1294784_10 Sucrose-6F-phosphate phosphohydrolase - - - 0.00000000000001023 84.0
SRR25158458_k127_1294784_11 Peptidase S24-like - - - 0.0000000000179 68.0
SRR25158458_k127_1294784_12 Glutaredoxin - - - 0.000002829 53.0
SRR25158458_k127_1294784_13 Fic/DOC family - - - 0.00005684 46.0
SRR25158458_k127_1294784_2 Transposase DDE domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002846 345.0
SRR25158458_k127_1294784_3 Belongs to the RNA methyltransferase TrmD family K00554 GO:0001510,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008757,GO:0009019,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016423,GO:0016740,GO:0016741,GO:0016772,GO:0016779,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050518,GO:0070567,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 2.1.1.228 0.0000000000000000000000000000000000000000000000000000000000000000000000003568 252.0
SRR25158458_k127_1294784_4 PFAM RNP-1 like RNA-binding protein - - - 0.000000000000000000000000000003502 124.0
SRR25158458_k127_1294784_5 Superoxide dismutase K00518 - 1.15.1.1 0.0000000000000000000000000001574 119.0
SRR25158458_k127_1294784_6 Bacterial capsule synthesis protein PGA_cap K07282,K12132 - 2.7.11.1 0.000000000000000000000000002138 126.0
SRR25158458_k127_1294784_7 Zincin-like metallopeptidase - - - 0.0000000000000000000004164 107.0
SRR25158458_k127_1294784_8 Ferric reductase like transmembrane component - - - 0.0000000000000000000013 101.0
SRR25158458_k127_1294784_9 Copper binding proteins, plastocyanin/azurin family - - - 0.00000000000000000178 90.0
SRR25158458_k127_1313331_0 Single Cache-like K07636 - 2.7.13.3 0.0000000000000000000000000000000000008049 158.0
SRR25158458_k127_1313331_1 histidine kinase HAMP region domain protein - - - 0.000000000000000000000000000000000576 150.0
SRR25158458_k127_1313331_2 - - - - 0.00004156 46.0
SRR25158458_k127_1318914_0 Cell division protein FtsA - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000004225 297.0
SRR25158458_k127_1318914_1 Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation K07082 - - 0.0000000000000000000000000000000000000000000001545 182.0
SRR25158458_k127_1318914_2 DDE superfamily endonuclease K07494,K07499 - - 0.000000000000000000000000000000000000001188 154.0
SRR25158458_k127_1318914_3 Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA K07447 GO:0000966,GO:0000967,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0022613,GO:0034470,GO:0034471,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:1901360 - 0.000000000000000002269 89.0
SRR25158458_k127_131944_0 COG2925 Exonuclease I K01141 GO:0000175,GO:0000287,GO:0000738,GO:0003674,GO:0003676,GO:0003677,GO:0003697,GO:0003824,GO:0004518,GO:0004527,GO:0004529,GO:0004532,GO:0004536,GO:0004540,GO:0005488,GO:0006139,GO:0006259,GO:0006308,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008296,GO:0008297,GO:0008310,GO:0008408,GO:0008852,GO:0009056,GO:0009057,GO:0009987,GO:0016070,GO:0016787,GO:0016788,GO:0016796,GO:0016829,GO:0016835,GO:0016895,GO:0016896,GO:0019439,GO:0034641,GO:0034655,GO:0043167,GO:0043169,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0046483,GO:0046700,GO:0046872,GO:0051575,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090503,GO:0097159,GO:0140097,GO:0140098,GO:1901360,GO:1901361,GO:1901363,GO:1901575 3.1.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001161 376.0
SRR25158458_k127_131944_1 An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control K03979 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004891 337.0
SRR25158458_k127_131944_2 Putative transmembrane protein (PGPGW) - - - 0.000000004748 63.0
SRR25158458_k127_131944_3 Haloacid dehalogenase-like hydrolase K07025 - - 0.0000003658 60.0
SRR25158458_k127_1325443_0 Responsible for synthesis of pseudouridine from uracil K06180 - 5.4.99.23 0.000000000000000000000000000000000000000000000000000000001001 211.0
SRR25158458_k127_1325443_1 Psort location Cytoplasmic, score K01867 - 6.1.1.2 0.0000000000000000000000000000000000000005832 154.0
SRR25158458_k127_1325443_2 GlcNAc-PI de-N-acetylase - - - 0.000000000000000000000000000009436 128.0
SRR25158458_k127_1325443_3 DNA polymerase III K02341 - 2.7.7.7 0.000000000001899 77.0
SRR25158458_k127_1325443_4 RNA polymerase II-associated protein - GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0032991,GO:0044424,GO:0044444,GO:0044464,GO:0097255 - 0.0001189 52.0
SRR25158458_k127_1325443_5 - - - - 0.0002626 45.0
SRR25158458_k127_1327876_0 transcriptional regulatory protein - GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.00000000000000000000000000000000000000000000000000000000002032 212.0
SRR25158458_k127_1327876_1 alpha-ribazole phosphatase activity K01834 - 5.4.2.11 0.0000000000002439 77.0
SRR25158458_k127_1327876_2 Domain of unknown function (DUF4131) K02238 - - 0.000000000146 74.0
SRR25158458_k127_1340379_0 Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain K01872 - 6.1.1.7 3.035e-198 636.0
SRR25158458_k127_1340379_1 Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation K01874 - 6.1.1.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001037 389.0
SRR25158458_k127_1340379_2 Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34 K00566 - 2.8.1.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003337 362.0
SRR25158458_k127_1340379_3 aminotransferase class V K04487 - 2.8.1.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003433 340.0
SRR25158458_k127_1340379_4 PFAM Glucose Sorbosone dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000005514 283.0
SRR25158458_k127_1340379_5 TatD related DNase K03424 - - 0.000000000000000000000000000000000000000000000005786 184.0
SRR25158458_k127_1340379_7 DUF218 domain - - - 0.00000001159 64.0
SRR25158458_k127_1364633_0 lipolytic protein G-D-S-L family - - - 0.00000000000000000000000000000000005971 154.0
SRR25158458_k127_1364633_1 phenazine biosynthesis protein - - - 0.000000000000000001601 93.0
SRR25158458_k127_138346_0 Type II secretion system (T2SS), protein E, N-terminal domain K02652 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000009311 283.0
SRR25158458_k127_138346_1 SpoU rRNA Methylase family - - - 0.00000000000000000000000000000000000000000000000000000008879 200.0
SRR25158458_k127_138346_2 Peptidase family M23 - - - 0.0000000000000000000000000000000000000004509 158.0
SRR25158458_k127_138346_3 Cysteine-rich secretory protein family - - - 0.00000000000000000000000006959 117.0
SRR25158458_k127_138346_4 Lysin motif - - - 0.00000000000000256 85.0
SRR25158458_k127_1413960_0 YHS domain K06966 - 3.2.2.10 0.00000000000000000000000000001943 124.0
SRR25158458_k127_1430839_0 GTP-binding protein LepA C-terminus K03596 - - 4.093e-199 636.0
SRR25158458_k127_1430839_1 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004696 562.0
SRR25158458_k127_1430839_2 Involved in peptidoglycan biosynthesis. Transports lipid-linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane K03980 - - 0.00000000000000000000000000000000000000000003718 180.0
SRR25158458_k127_1430839_3 Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine K04075,K15780 - 2.4.2.8,6.3.4.19 0.00000000000000000000000000000000000039 151.0
SRR25158458_k127_1430839_4 Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons K03705 GO:0006355,GO:0008150,GO:0009889,GO:0009890,GO:0009892,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0019219,GO:0019222,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0045892,GO:0045934,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0060255,GO:0065007,GO:0080090,GO:1902679,GO:1903506,GO:1903507,GO:2000112,GO:2000113,GO:2001141 - 0.000000000000000000000002744 111.0
SRR25158458_k127_1430839_5 Essential for recycling GMP and indirectly, cGMP K00942 GO:0003674,GO:0003824,GO:0004385,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009126,GO:0009132,GO:0009135,GO:0009150,GO:0009161,GO:0009165,GO:0009167,GO:0009179,GO:0009185,GO:0009259,GO:0009987,GO:0015949,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0042278,GO:0042802,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046037,GO:0046128,GO:0046483,GO:0046710,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0072521,GO:0090407,GO:1901068,GO:1901135,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901576,GO:1901657 2.7.4.8 0.0000000000000000000434 100.0
SRR25158458_k127_1430839_6 Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ K03687 - - 0.000000000000000001399 92.0
SRR25158458_k127_149867_0 This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly K02871 GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000003319 176.0
SRR25158458_k127_149867_1 Tryptophanyl-tRNA synthetase K01867 GO:0005575,GO:0005623,GO:0005886,GO:0008150,GO:0016020,GO:0040007,GO:0044464,GO:0071944 6.1.1.2 0.00000000000000000000000000000000000000001404 162.0
SRR25158458_k127_149867_2 Belongs to the universal ribosomal protein uS9 family K02996 GO:0000462,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006139,GO:0006364,GO:0006396,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016070,GO:0016072,GO:0019538,GO:0022613,GO:0022626,GO:0022627,GO:0030490,GO:0032991,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0042254,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000001483 127.0
SRR25158458_k127_149867_3 Ribosomal protein L17 K02879 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.0000000000000000000000000003291 119.0
SRR25158458_k127_149867_4 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03040 - 2.7.7.6 0.0000000000000000000006034 100.0
SRR25158458_k127_1601672_0 Belongs to the D-alanine--D-alanine ligase family K01921 GO:0000270,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006022,GO:0006023,GO:0006024,GO:0006807,GO:0008150,GO:0008152,GO:0008716,GO:0009058,GO:0009059,GO:0009252,GO:0009273,GO:0009314,GO:0009628,GO:0009987,GO:0010165,GO:0010212,GO:0016874,GO:0016879,GO:0016881,GO:0030203,GO:0034645,GO:0042546,GO:0043170,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044249,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0050896,GO:0070589,GO:0071554,GO:0071704,GO:0071840,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576 6.3.2.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002551 322.0
SRR25158458_k127_1601672_1 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03470 - 3.1.26.4 0.0000000000000000000000000000000000000003652 155.0
SRR25158458_k127_1601672_2 This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site K02884 - - 0.000000000000000000000000007638 115.0
SRR25158458_k127_1601672_3 Belongs to the UPF0102 family K07460 - - 0.00000000001584 69.0
SRR25158458_k127_1601672_4 - - - - 0.0000000211 61.0
SRR25158458_k127_1687927_0 Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and or for immediate growth after restoration of oxygen K00525 GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0016020,GO:0030312,GO:0044424,GO:0044444,GO:0044464,GO:0071944 1.17.4.1 4.606e-310 970.0
SRR25158458_k127_1687927_1 amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile) K01870 - 6.1.1.5 3.671e-219 713.0
SRR25158458_k127_1687927_2 SMART Vitamin K epoxide reductase - - - 0.000000000000000000000000000000000000000000000000009174 186.0
SRR25158458_k127_1704885_0 Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates K01937 - 6.3.4.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007961 516.0
SRR25158458_k127_1704885_1 MacB-like periplasmic core domain K02004 - - 0.0000000000000000000000000000000000002352 144.0
SRR25158458_k127_1704885_2 DnaJ-class molecular chaperone with C-terminal Zn finger domain K05516 - - 0.0000000000008464 74.0
SRR25158458_k127_1704885_3 CHASE - - - 0.00001912 56.0
SRR25158458_k127_1863007_0 E1-E2 ATPase K01533,K17686 - 3.6.3.4,3.6.3.54 0.0000000000000000000000000000000000000000000000000000000000000000000000000004496 259.0
SRR25158458_k127_1863007_1 bifunctional deaminase-reductase domain protein - - - 0.000007511 51.0
SRR25158458_k127_1882682_0 One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex K02519 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006871 496.0
SRR25158458_k127_1882682_1 Ribosomal protein S1-like RNA-binding domain K02945 - - 0.000000000000000000000000000000000000000000000000000000000000009985 229.0
SRR25158458_k127_1882682_2 Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus K00604 GO:0003674,GO:0003824,GO:0004479,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006412,GO:0006413,GO:0006464,GO:0006518,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016741,GO:0016742,GO:0019538,GO:0019988,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0036211,GO:0043043,GO:0043170,GO:0043412,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0046483,GO:0071704,GO:0071951,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 2.1.2.9 0.000000000000000000000000000000000000000000000000000002599 202.0
SRR25158458_k127_1882682_3 Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA K04066 - - 0.00000000000000000000000000000000000000001062 160.0
SRR25158458_k127_1882682_4 Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions K01462 - 3.5.1.88 0.00000000000000000000000000000276 127.0
SRR25158458_k127_1882682_5 - - - - 0.00000000000000000189 89.0
SRR25158458_k127_1894616_0 Belongs to the peptidase S41A family K03797 - 3.4.21.102 0.00000000000000000000000000000000000000000000000000002798 196.0
SRR25158458_k127_1894616_1 Putative RNA methylase family UPF0020 - - - 0.000000000000000000000004696 115.0
SRR25158458_k127_1894616_2 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K07657 - - 0.000000000000000000003949 97.0
SRR25158458_k127_1894616_3 Belongs to the bacterial ribosomal protein bL27 family K02899 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.000000000000000008327 85.0
SRR25158458_k127_1894616_4 lysyltransferase activity K07027,K14205 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 2.3.2.3 0.00000000004335 68.0
SRR25158458_k127_1899116_0 Predicted membrane protein (DUF2207) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001167 296.0
SRR25158458_k127_1899116_1 Restriction endonuclease K07448,K07449 - - 0.0000000000000000000000000000005739 130.0
SRR25158458_k127_1943752_0 Participates in both transcription termination and antitermination K02600 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006355,GO:0008150,GO:0009889,GO:0010468,GO:0010556,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0031554,GO:0031564,GO:0043244,GO:0044424,GO:0044444,GO:0044464,GO:0050789,GO:0050794,GO:0051128,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0080090,GO:1903506,GO:2000112,GO:2001141 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000169 322.0
SRR25158458_k127_1943752_1 Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE K03696 - - 0.000000000000000000000000001071 121.0
SRR25158458_k127_2011324_0 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing K03551 - 3.6.4.12 0.000000000000000000000000000000000000000000000000000000000005917 212.0
SRR25158458_k127_2011324_1 Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage K03553 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006310,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:1901360 - 0.00000000000000000000000000000000000000000007719 162.0
SRR25158458_k127_2015674_0 Glycosyltransferase Family 4 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000678 426.0
SRR25158458_k127_2015674_1 peptidase U61 LD-carboxypeptidase A K01297 - 3.4.17.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002716 367.0
SRR25158458_k127_2015674_2 Glycosyltransferase Family 4 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000003135 271.0
SRR25158458_k127_2015674_3 PFAM alpha beta hydrolase fold K00627 - 2.3.1.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000004563 263.0
SRR25158458_k127_2015674_4 Glycosyl transferases group 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000002948 259.0
SRR25158458_k127_2015674_5 PFAM nuclease (SNase domain protein) K01174 - 3.1.31.1 0.00000000000000000000000000000000003348 141.0
SRR25158458_k127_2015674_6 Belongs to the UPF0306 family K09979 - - 0.000000000000001477 83.0
SRR25158458_k127_2018559_0 Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) K01885 - 6.1.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007276 529.0
SRR25158458_k127_2018559_1 - - - - 0.0000000000000000000000000000000000000000000000000007113 208.0
SRR25158458_k127_2018559_2 PFAM Glycosyl transferase family 2 - - - 0.0000000000000000000000000005608 132.0
SRR25158458_k127_2018559_3 GtrA-like protein - - - 0.00000000001362 70.0
SRR25158458_k127_2083697_0 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02434 - 6.3.5.6,6.3.5.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006325 349.0
SRR25158458_k127_2199785_0 Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage K03553 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006950,GO:0006974,GO:0007154,GO:0008150,GO:0009432,GO:0009605,GO:0009987,GO:0009991,GO:0031668,GO:0033554,GO:0044424,GO:0044444,GO:0044464,GO:0050896,GO:0051716,GO:0071496 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001633 472.0
SRR25158458_k127_2199785_1 Type II IV secretion system protein K02454,K02652 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001666 455.0
SRR25158458_k127_2199785_2 COG COG1459 Type II secretory pathway component PulF Cell motility and secretion Intracellular trafficking and secretion K02653 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001501 310.0
SRR25158458_k127_2199785_3 methyltransferase activity - - - 0.0000000000000000000000000000000000000000000000003358 182.0
SRR25158458_k127_2199785_4 GDP-mannose mannosyl hydrolase activity K03574 - 3.6.1.55 0.000000000000000000000000000007258 125.0
SRR25158458_k127_2199785_5 RecX family K03565 - - 0.00000000000000000000002294 107.0
SRR25158458_k127_2199785_6 GDSL-like Lipase/Acylhydrolase family - - - 0.000000000000000000006122 100.0
SRR25158458_k127_2199785_7 Lamin Tail Domain - - - 0.000000003083 69.0
SRR25158458_k127_2243786_0 Domain of unknown function (DUF1727) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007227 337.0
SRR25158458_k127_2243786_1 Belongs to the ClpA ClpB family K03695,K03696 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001224 332.0
SRR25158458_k127_2243786_2 VIT family - - - 0.0000000000000000000000000000000000000004819 156.0
SRR25158458_k127_2277984_0 Ku70/Ku80 beta-barrel domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001529 287.0
SRR25158458_k127_2277984_1 DNA polymerase Ligase (LigD) K01971 - 6.5.1.1 0.00000000000000000000000000000000000000003395 153.0
SRR25158458_k127_2277984_2 cellular response to heat K09807 - - 0.000001278 59.0
SRR25158458_k127_2279426_0 Mg2 transporter protein CorA family protein K03284 - - 0.000000000000000000000000000000000000001618 159.0
SRR25158458_k127_2279426_1 Major facilitator superfamily - - - 0.0000000000000000000000000000000001255 136.0
SRR25158458_k127_2279426_2 Belongs to the Fur family K03711 - - 0.00000000000000004189 87.0
SRR25158458_k127_2279426_4 toxin-antitoxin pair type II binding - - - 0.0000000184 60.0
SRR25158458_k127_2340154_0 Type IV secretory pathway, VirB4 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002407 306.0
SRR25158458_k127_2382166_0 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions K04077 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006457,GO:0006458,GO:0008150,GO:0009987,GO:0016465,GO:0032991,GO:0044183,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0051082,GO:0061077,GO:0101031,GO:1990220 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002855 527.0
SRR25158458_k127_2382166_1 Beta-lactamase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000003982 279.0
SRR25158458_k127_2382166_2 ABC transporter K02003 - - 0.000000000000000000000000000000000000000000000000000000000000000000003016 245.0
SRR25158458_k127_2382166_3 TIGRFAM bifunctional phosphoglucose phosphomannose isomerase K15916 - 5.3.1.8,5.3.1.9 0.000000000000000000000000000000000000000000000000000000000000002505 230.0
SRR25158458_k127_2382166_4 Efflux ABC transporter permease protein K02004 - - 0.000000000000000000000000000000000000000000000000000001276 207.0
SRR25158458_k127_2382166_5 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III K01840 - 5.4.2.8 0.000000000000000000000000000000000000000000007191 168.0
SRR25158458_k127_2382166_6 Helix-turn-helix domain - - - 0.0000000000000000007234 94.0
SRR25158458_k127_2382166_7 Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter K04078 GO:0003674,GO:0005488,GO:0005515,GO:0042802 - 0.000000000000000002806 87.0
SRR25158458_k127_2382166_8 ASCH domain - - - 0.0000001925 57.0
SRR25158458_k127_2472167_0 In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity K02335 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001135 561.0
SRR25158458_k127_2472167_1 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth K03086 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001445 349.0
SRR25158458_k127_2472167_2 This enzyme is involved in nucleotide metabolism it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA K01520 GO:0000287,GO:0003674,GO:0003824,GO:0004170,GO:0005488,GO:0006139,GO:0006220,GO:0006221,GO:0006226,GO:0006244,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009129,GO:0009130,GO:0009141,GO:0009143,GO:0009147,GO:0009149,GO:0009157,GO:0009162,GO:0009165,GO:0009166,GO:0009176,GO:0009177,GO:0009200,GO:0009204,GO:0009211,GO:0009213,GO:0009219,GO:0009221,GO:0009223,GO:0009262,GO:0009263,GO:0009264,GO:0009265,GO:0009394,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0019692,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0046078,GO:0046080,GO:0046081,GO:0046385,GO:0046386,GO:0046434,GO:0046483,GO:0046700,GO:0046872,GO:0047429,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0072529,GO:0090407,GO:1901135,GO:1901136,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576 3.6.1.23 0.000000000000000000000000000000000000000000000000000000000000003776 219.0
SRR25158458_k127_2472167_3 dephospho-CoA kinase activity K00859,K08309,K10563 GO:0003674,GO:0003824,GO:0004140,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006732,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0015936,GO:0015937,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0033865,GO:0033866,GO:0033875,GO:0034030,GO:0034032,GO:0034033,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046390,GO:0046483,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.1.24,3.2.2.23,4.2.99.18 0.000000000000000000000000000001296 128.0
SRR25158458_k127_2472167_4 Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids K00806 GO:0002094,GO:0003674,GO:0003824,GO:0004659,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006066,GO:0006629,GO:0006720,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0009058,GO:0009987,GO:0016093,GO:0016094,GO:0016740,GO:0016765,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046165,GO:0071704,GO:1901576,GO:1901615,GO:1901617 2.5.1.31 0.000000000000000000000004522 111.0
SRR25158458_k127_2553570_0 Elongation factor G C-terminus K06207 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002983 554.0
SRR25158458_k127_2553570_1 ABC transporter transmembrane region K06147 - - 0.00000000000000000000000000000000000003764 160.0
SRR25158458_k127_2553570_2 Protein of unknown function (DUF2690) - - - 0.000000008055 63.0
SRR25158458_k127_2580893_0 DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA K01972 - 6.5.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001305 569.0
SRR25158458_k127_2580893_1 Peptidase family M48 K03799 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001123 335.0
SRR25158458_k127_2580893_2 LemA family K03744 - - 0.0000000000000000000000000000000000000000000000000000000000000007911 223.0
SRR25158458_k127_2625444_0 Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism K03685 - 3.1.26.3 0.000000000000000000000000000000000000000000000000009276 188.0
SRR25158458_k127_2625444_1 Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons K03625 - - 0.000000000000000000000000001113 117.0
SRR25158458_k127_2625444_2 KH domain K06960 - - 0.00000000000001337 79.0
SRR25158458_k127_2625444_3 Belongs to the NUDIX hydrolase family - - - 0.00000000001573 72.0
SRR25158458_k127_2625444_4 Belongs to the bacterial ribosomal protein bS16 family K02959 - - 0.00000000007519 67.0
SRR25158458_k127_2629209_0 Belongs to the EPSP synthase family. MurA subfamily K00790 - 2.5.1.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006118 591.0
SRR25158458_k127_2629209_1 Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism K00600 - 2.1.2.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004153 451.0
SRR25158458_k127_2629209_2 Udp-n-acetylenolpyruvoylglucosamine reductase K00075 - 1.3.1.98 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001443 399.0
SRR25158458_k127_2629209_3 Protein of unknown function (DUF817) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001549 274.0
SRR25158458_k127_2629209_5 - - - - 0.0000000004251 74.0
SRR25158458_k127_2643953_0 Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family K03437 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002107 351.0
SRR25158458_k127_2643953_1 ATPase, P-type (transporting), HAD superfamily, subfamily IC - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001011 353.0
SRR25158458_k127_2643953_2 Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001149 303.0
SRR25158458_k127_2643953_3 Cytochrome C biogenesis protein - - - 0.00000000000000000000000002117 117.0
SRR25158458_k127_2643953_4 regulator - - - 0.0000002418 56.0
SRR25158458_k127_2650178_0 exonuclease K07462 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000145 362.0
SRR25158458_k127_2650178_1 Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA K04066 - - 0.00000000000000000000000000000000000000000000000000000000000000000000006286 258.0
SRR25158458_k127_2650178_2 Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism K00939 - 2.7.4.3 0.00000000000000000000000000008933 122.0
SRR25158458_k127_2650178_3 PFAM Yqey-like protein K09117 - - 0.0000000000000000000002039 103.0
SRR25158458_k127_2650178_4 phosphoribosyl transferase K07100 - - 0.00000000000003336 81.0
SRR25158458_k127_2650178_5 PFAM DNA polymerase, beta domain protein region - - - 0.0000004588 55.0
SRR25158458_k127_2671297_0 Patatin-like phospholipase K07001 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000238 253.0
SRR25158458_k127_2671297_1 - - - - 0.00002197 50.0
SRR25158458_k127_2671297_2 Catalyzes the oxidation of either pyridoxine 5'- phosphate (PNP) or pyridoxamine 5'-phosphate (PMP) into pyridoxal 5'-phosphate (PLP) K00275 GO:0003674,GO:0003824,GO:0004733,GO:0006081,GO:0006725,GO:0006732,GO:0006766,GO:0006767,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009110,GO:0009987,GO:0016491,GO:0016638,GO:0016641,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0034641,GO:0042364,GO:0042816,GO:0042819,GO:0042822,GO:0042823,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046184,GO:0046483,GO:0051186,GO:0051188,GO:0055114,GO:0071704,GO:0072524,GO:0072525,GO:0090407,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901615,GO:1901617 1.4.3.5 0.0006926 49.0
SRR25158458_k127_2671297_3 - - - - 0.0008379 49.0
SRR25158458_k127_2822179_0 Transketolase, pyrimidine binding domain K00615 - 2.2.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000249 398.0
SRR25158458_k127_2822179_1 Fructose-bisphosphate aldolase class-II K01624 - 4.1.2.13 0.000000000000000000000000000000000000000000002516 175.0
SRR25158458_k127_2822179_2 pfkB family carbohydrate kinase - - - 0.0000001286 56.0
SRR25158458_k127_2830419_0 amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner K01873 - 6.1.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001619 606.0
SRR25158458_k127_2830419_1 Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA K00783 - 2.1.1.177 0.000000000000000000000000000000000003851 143.0
SRR25158458_k127_2830419_2 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases K02503 - - 0.00000000000000000000000004317 111.0
SRR25158458_k127_2919432_0 phenylalanyl-tRNA synthetase (beta subunit) K01890 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 6.1.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003927 366.0
SRR25158458_k127_2919432_1 Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily K01889 - 6.1.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002385 280.0
SRR25158458_k127_2919432_10 Glutaredoxin - - - 0.00000001304 59.0
SRR25158458_k127_2919432_2 Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family K00384 - 1.8.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000002154 267.0
SRR25158458_k127_2919432_3 Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions K01507 - 3.6.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000001739 258.0
SRR25158458_k127_2919432_4 PFAM response regulator receiver K07665 - - 0.000000000000000000000000000000000000000000000000000000000000000000006871 241.0
SRR25158458_k127_2919432_5 ZIP Zinc transporter K16267 - - 0.0000000000000000000000000000000000000000000433 170.0
SRR25158458_k127_2919432_6 NAD(P)H-dependent FMN reductase - - - 0.0000000000000000000000000000000000004265 147.0
SRR25158458_k127_2919432_7 FKBP-type peptidyl-prolyl cis-trans isomerase K03772 - 5.2.1.8 0.0000000000000000000000000004711 120.0
SRR25158458_k127_2919432_8 glycerophosphoryl diester phosphodiesterase K01126 - 3.1.4.46 0.00000000000000000000002254 108.0
SRR25158458_k127_2919432_9 Peptide methionine sulfoxide reductase - - - 0.00000000000000002221 87.0
SRR25158458_k127_2998839_0 Major Facilitator Superfamily K18833 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000445 527.0
SRR25158458_k127_2998839_1 Short-chain dehydrogenase reductase sdr - - - 0.00000000000000000000000000000000000000000000000000000000000000004634 231.0
SRR25158458_k127_2998839_2 3-demethylubiquinone-9 3-methyltransferase K04750 - - 0.000000000000000000000000000000000000000000000000000000000002531 212.0
SRR25158458_k127_2998839_3 COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases - - - 0.00000000000000000000000000000000000000000000000000000000125 208.0
SRR25158458_k127_2998839_4 Belongs to the peptidase S26 family - - - 0.000000000000000000000000000000000000000009653 156.0
SRR25158458_k127_2998839_5 Cytidine and deoxycytidylate deaminase zinc-binding region K01487 - 3.5.4.3 0.0000000000000000004075 95.0
SRR25158458_k127_2998839_6 Cyclic nucleotide-monophosphate binding domain K10914,K21828 - - 0.00000000000000004372 90.0
SRR25158458_k127_2998839_7 NUDIX domain K01515 - 3.6.1.13 0.0001721 52.0
SRR25158458_k127_3006439_0 FAD linked oxidases, C-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000005686 304.0
SRR25158458_k127_3006439_1 MazG nucleotide pyrophosphohydrolase domain - - - 0.000000000000000000000001728 106.0
SRR25158458_k127_301712_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane K03070 - - 3.11e-261 835.0
SRR25158458_k127_301712_1 Inositol monophosphatase family K01092 - 3.1.3.25 0.0001481 53.0
SRR25158458_k127_3038669_0 Histidyl-tRNA synthetase K01892 - 6.1.1.21 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008441 317.0
SRR25158458_k127_3038669_1 Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase K03545 GO:0000413,GO:0003674,GO:0003755,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006457,GO:0006458,GO:0006464,GO:0006807,GO:0006950,GO:0008150,GO:0008152,GO:0009266,GO:0009408,GO:0009628,GO:0009987,GO:0016853,GO:0016859,GO:0018193,GO:0018208,GO:0019538,GO:0036211,GO:0042802,GO:0043021,GO:0043022,GO:0043170,GO:0043335,GO:0043412,GO:0044183,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0050896,GO:0051083,GO:0061077,GO:0071704,GO:0140096,GO:1901564 - 0.00000000000000000000000002138 115.0
SRR25158458_k127_3132553_0 Major facilitator superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006511 328.0
SRR25158458_k127_3132553_1 Belongs to the 'phage' integrase family - - - 0.0000000000000000000000000000000000000000000000000002591 191.0
SRR25158458_k127_3132553_2 Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids K01775,K01929 GO:0000270,GO:0003674,GO:0003824,GO:0006022,GO:0006023,GO:0006024,GO:0006807,GO:0008150,GO:0008152,GO:0008784,GO:0009058,GO:0009059,GO:0009252,GO:0009273,GO:0009987,GO:0016853,GO:0016854,GO:0016855,GO:0030203,GO:0034645,GO:0036361,GO:0042546,GO:0043170,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044249,GO:0044260,GO:0047661,GO:0070589,GO:0071554,GO:0071704,GO:0071840,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576 5.1.1.1,6.3.2.10 0.0000000000000000000000000000000000000008412 162.0
SRR25158458_k127_3132553_3 PFAM Arginine-tRNA-protein transferase, C terminus K21420 - 2.3.2.29 0.00000000000000000000000983 111.0
SRR25158458_k127_3132553_4 CAAX protease self-immunity K07052 - - 0.0004584 47.0
SRR25158458_k127_3138022_0 ferric reductase - - - 0.000000000000000000000000000000000000000000000000000000000009861 215.0
SRR25158458_k127_3138022_1 LssY C-terminus - - - 0.0000000000000000000000000000000000000000000001183 181.0
SRR25158458_k127_3138022_2 RmuC family K09760 - - 0.00000000000000000000000000000000000000000031 171.0
SRR25158458_k127_3138022_3 transcriptional regulator - - - 0.0000004792 57.0
SRR25158458_k127_3138022_4 COG0671 Membrane-associated phospholipid phosphatase K19302 - 3.6.1.27 0.000003939 56.0
SRR25158458_k127_3150848_0 DNA polymerase III alpha subunit K02337,K14162 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001349 456.0
SRR25158458_k127_3150848_1 Beta-lactamase superfamily domain - - - 0.0000002232 55.0
SRR25158458_k127_3167860_0 Beta-lactamase enzyme family K17836 - 3.5.2.6 0.000000000000000000000000000004492 138.0
SRR25158458_k127_3167860_1 Type IV pilus assembly protein PilM; K02662 - - 0.0000000000001364 81.0
SRR25158458_k127_3167860_2 VanW like protein - - - 0.0000005719 63.0
SRR25158458_k127_3317789_0 Belongs to the glycosyl hydrolase 1 family K05350 - 3.2.1.21 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001211 337.0
SRR25158458_k127_3317789_1 phosphotransferase activity, for other substituted phosphate groups - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003542 284.0
SRR25158458_k127_3317789_2 Penicillin-binding protein, transpeptidase domain protein K03587,K08384 - 3.4.16.4 0.000000000000000000000000000000000000000000000000000000000000000000000000001112 277.0
SRR25158458_k127_3317789_3 Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA K03438 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016434,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0070475,GO:0071424,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.199 0.00000000000000000000000000000000000000000000000000000000000000000001043 244.0
SRR25158458_k127_3317789_4 Cell cycle protein K03588 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000000000000000000000000003254 215.0
SRR25158458_k127_3317789_5 Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II) K02563 - 2.4.1.227 0.000000000000000000000000000000000000000000251 174.0
SRR25158458_k127_3317789_6 PFAM Nucleotidyl transferase K00963 - 2.7.7.9 0.00000000000000000000000000000000000008732 153.0
SRR25158458_k127_3317789_7 Belongs to the inositol monophosphatase superfamily K01092 - 3.1.3.25 0.00000000000000000000000000001659 124.0
SRR25158458_k127_3317789_8 Belongs to the MraZ family K03925 - - 0.000000000000004661 80.0
SRR25158458_k127_3317789_9 PFAM Chromatin associated protein KTI12 - - - 0.0000000000001643 76.0
SRR25158458_k127_3324323_0 Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity K03531 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007499 373.0
SRR25158458_k127_3324323_1 Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring K03590 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002793 281.0
SRR25158458_k127_3324323_2 Methionine aminopeptidase K01265 - 3.4.11.18 0.00000000000000000000000000000000000000000000000000000000000000003719 229.0
SRR25158458_k127_3335292_0 Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits K02112 - 3.6.3.14 1.044e-202 640.0
SRR25158458_k127_3335292_1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit K02111 GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005886,GO:0008150,GO:0016020,GO:0016469,GO:0030312,GO:0032991,GO:0040007,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0045259,GO:0045260,GO:0071944,GO:0098796,GO:0098797 3.6.3.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002492 574.0
SRR25158458_k127_3335292_10 transferase activity, transferring acyl groups other than amino-acyl groups - - - 0.00001486 57.0
SRR25158458_k127_3335292_2 Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001313 362.0
SRR25158458_k127_3335292_3 Belongs to the helicase family. UvrD subfamily K03657 - 3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006446 385.0
SRR25158458_k127_3335292_4 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex K02115 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.0000000000000000000000000000000000000000000000000000001168 205.0
SRR25158458_k127_3335292_5 it plays a direct role in the translocation of protons across the membrane K02108 - - 0.0000000000000000000000000005849 124.0
SRR25158458_k127_3335292_6 Produces ATP from ADP in the presence of a proton gradient across the membrane K02114 - - 0.00000000001879 70.0
SRR25158458_k127_3335292_7 Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0) K02109 - - 0.000000001916 66.0
SRR25158458_k127_3335292_8 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02113 GO:0005575,GO:0005622,GO:0005623,GO:0005886,GO:0016020,GO:0016469,GO:0032991,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0045259,GO:0045260,GO:0071944,GO:0098796,GO:0098797 - 0.0000002899 57.0
SRR25158458_k127_3335292_9 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02110 GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0008324,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015399,GO:0015405,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016021,GO:0016462,GO:0016469,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0031224,GO:0032991,GO:0033177,GO:0034220,GO:0034641,GO:0034654,GO:0036442,GO:0042623,GO:0042625,GO:0042626,GO:0043492,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044464,GO:0044769,GO:0045259,GO:0045263,GO:0046034,GO:0046390,GO:0046483,GO:0046933,GO:0046961,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0099131,GO:0099132,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600 - 0.000006674 50.0
SRR25158458_k127_3378913_0 Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr) K01866 GO:0003674,GO:0003824,GO:0004812,GO:0004831,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016070,GO:0016874,GO:0016875,GO:0019752,GO:0034641,GO:0034660,GO:0043038,GO:0043039,GO:0043170,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564 6.1.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004781 317.0
SRR25158458_k127_3378913_1 PFAM glycosyl transferase, family 51 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000341 323.0
SRR25158458_k127_3378913_2 DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function K04485 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002901 263.0
SRR25158458_k127_3378913_3 Large family of predicted nucleotide-binding domains - - - 0.00000000000000000000000000000000000000000000000000000000799 209.0
SRR25158458_k127_3378913_4 Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA) K03655 - 3.6.4.12 0.000000000000000000000000000000000000000000000000000003309 202.0
SRR25158458_k127_3378913_5 Transposase - - - 0.0001884 53.0
SRR25158458_k127_3442180_0 competence protein - - - 0.00000000000000000000006801 107.0
SRR25158458_k127_3442180_1 Histidine phosphatase superfamily (branch 1) K15634 - 5.4.2.12 0.000000000000000000000183 100.0
SRR25158458_k127_3442180_2 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.00000000000000002659 88.0
SRR25158458_k127_3442180_3 Resolvase, N terminal domain - - - 0.000005702 51.0
SRR25158458_k127_3492240_0 Amidase K02433 - 6.3.5.6,6.3.5.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002018 437.0
SRR25158458_k127_3492240_1 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02435 - 6.3.5.6,6.3.5.7 0.00000000000000000001286 94.0
SRR25158458_k127_3499027_0 His Kinase A (phosphoacceptor) domain K07636 - 2.7.13.3 0.000000000000000000000000000000000000000000003564 173.0
SRR25158458_k127_3499027_2 Transcriptional regulatory protein, C terminal K07667 - - 0.0000000000000006585 82.0
SRR25158458_k127_3609663_0 ATP-dependent DNA helicase K03657 - 3.6.4.12 4.851e-228 743.0
SRR25158458_k127_3609663_1 Belongs to the phosphoglycerate kinase family K00927,K01803 - 2.7.2.3,5.3.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001085 364.0
SRR25158458_k127_3609663_2 Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P) K01803 - 5.3.1.1 0.0000000000000000000000000000000000000000000000000000000000002272 220.0
SRR25158458_k127_3609663_3 AAA domain - - - 0.00000000000000000002464 98.0
SRR25158458_k127_3609663_4 Pfam:DUF955 - - - 0.00000000003419 72.0
SRR25158458_k127_3609663_5 Belongs to the Nudix hydrolase family - - - 0.000000008705 63.0
SRR25158458_k127_3651864_0 Belongs to the ClpA ClpB family K03696 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002968 514.0
SRR25158458_k127_3651864_1 nuclear chromosome segregation - - - 0.0000000000000000000000000000000000000000000000000000008622 207.0
SRR25158458_k127_3651864_2 DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function K04485 - - 0.0000000000000000000000000000000000000000000003664 173.0
SRR25158458_k127_3684059_0 PFAM UvrD REP helicase K03657 - 3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001831 455.0
SRR25158458_k127_3684059_1 Malic enzyme, NAD binding domain K00027 - 1.1.1.38 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004952 422.0
SRR25158458_k127_3684059_10 Belongs to the SUA5 family K07566 - 2.7.7.87 0.0000000000000000000004027 104.0
SRR25158458_k127_3684059_11 - - - - 0.000000000004243 68.0
SRR25158458_k127_3684059_12 CYTH K05873 - 4.6.1.1 0.0000000002304 68.0
SRR25158458_k127_3684059_13 ATPase family associated with various cellular activities (AAA) K03924 - - 0.0000002681 63.0
SRR25158458_k127_3684059_14 COG1253 Hemolysins and related proteins containing CBS domains - - - 0.0004408 52.0
SRR25158458_k127_3684059_2 Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn) K01876,K09759 - 6.1.1.12,6.1.1.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000135 348.0
SRR25158458_k127_3684059_3 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction K01409 GO:0000408,GO:0002949,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0032991,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0070525,GO:0071704,GO:0090304,GO:1901360 2.3.1.234 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001039 304.0
SRR25158458_k127_3684059_4 PFAM HhH-GPD superfamily base excision DNA repair protein K03575 - - 0.000000000000000000000000000000000000000000000000000000000000000000005289 242.0
SRR25158458_k127_3684059_5 Mechanosensitive ion channel K22044 - - 0.000000000000000000000000000000000000000000000000000000000000008182 225.0
SRR25158458_k127_3684059_6 NADPH-dependent FMN reductase - - - 0.000000000000000000000000000000000000000000001069 171.0
SRR25158458_k127_3684059_7 UvrD/REP helicase N-terminal domain K03657 - 3.6.4.12 0.000000000000000000000000000000000004391 145.0
SRR25158458_k127_3684059_8 Thioredoxin - - - 0.00000000000000000000000000000000002806 144.0
SRR25158458_k127_3684059_9 Histidine-specific methyltransferase, SAM-dependent - - - 0.00000000000000000000000000000000003656 149.0
SRR25158458_k127_369397_0 damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage K03702 - - 8.407e-266 833.0
SRR25158458_k127_3719_0 PFAM Glycosyl transferase family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000008623 279.0
SRR25158458_k127_3719_1 Predicted membrane protein (DUF2142) - - - 0.00000000000000000000000000000001264 141.0
SRR25158458_k127_3719_2 glycosyl transferase K00721 - 2.4.1.83 0.0000000001594 68.0
SRR25158458_k127_3719_3 Evidence 4 Homologs of previously reported genes of - - - 0.000002182 57.0
SRR25158458_k127_3732027_0 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan K01000 - 2.7.8.13 0.00000000000000000000000000000000000000000000000000000000337 212.0
SRR25158458_k127_3732027_2 Inositol monophosphatase family - - - 0.000000000000000000000009115 110.0
SRR25158458_k127_3744667_0 Transposase - - - 0.0000000000000000000000000000000000000000000000000000000000002698 223.0
SRR25158458_k127_3744667_1 Catalyzes the reversible phosphorylation of UMP to UDP K09903 - 2.7.4.22 0.00000000000000000000000000000000000000000000000000000000006992 213.0
SRR25158458_k127_3744667_2 double-stranded DNA 3'-5' exodeoxyribonuclease activity K01142 GO:0003674,GO:0003824,GO:0003906,GO:0004518,GO:0004527,GO:0004529,GO:0004536,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006259,GO:0006281,GO:0006284,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008296,GO:0008309,GO:0008311,GO:0008408,GO:0009987,GO:0016787,GO:0016788,GO:0016796,GO:0016895,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0090305,GO:0140097,GO:1901360 3.1.11.2 0.0000000000000000000000000000000000000000000000000000002704 196.0
SRR25158458_k127_3744667_3 Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene K03664 - - 0.00000000000000000000000005674 113.0
SRR25158458_k127_3744667_4 IrrE N-terminal-like domain - - - 0.000000000000009863 81.0
SRR25158458_k127_3844153_0 PFAM peptidase M13 K07386 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000775 512.0
SRR25158458_k127_3844153_1 epoxide hydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001348 484.0
SRR25158458_k127_3844153_10 Glycosyl transferase family 21 - - - 0.0000000000000000009374 99.0
SRR25158458_k127_3844153_11 Domain of unknown function (DUF305) - - - 0.000000000006545 70.0
SRR25158458_k127_3844153_12 Chromatin associated protein KTI12 - - - 0.000000004009 65.0
SRR25158458_k127_3844153_2 E1-E2 ATPase K01533 - 3.6.3.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001903 485.0
SRR25158458_k127_3844153_3 Winged helix DNA-binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002623 364.0
SRR25158458_k127_3844153_4 Mur ligase family, catalytic domain K02558 - 6.3.2.45 0.000000000000000000000000000000000000000000000000000000000000000000004336 252.0
SRR25158458_k127_3844153_5 Transcriptional regulator araC family protein - - - 0.00000000000000000000000000000000000000000000000000000000000008628 224.0
SRR25158458_k127_3844153_6 PFAM ATP-binding region, ATPase domain protein K07636,K07652 - 2.7.13.3 0.0000000000000000000000000000000000001341 160.0
SRR25158458_k127_3844153_7 Protein of unknown function DUF45 K07043 - - 0.00000000000000000000000000000009223 134.0
SRR25158458_k127_3844153_8 Metal-sensitive transcriptional repressor K21600 - - 0.00000000000000000000000000000668 121.0
SRR25158458_k127_3844153_9 SMART Metal-dependent phosphohydrolase, HD region K07023 - - 0.00000000000000000000000000001169 126.0
SRR25158458_k127_3919092_0 General secretory system II protein E domain protein K02652 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008772 455.0
SRR25158458_k127_3919092_1 PFAM Type II secretion system protein E K02669 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002682 381.0
SRR25158458_k127_3919092_2 General secretion pathway protein F K02455,K02653 - - 0.000000000000000000000000000000000000000000000000000000002165 211.0
SRR25158458_k127_3990422_0 PIF1-like helicase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001485 389.0
SRR25158458_k127_3990422_1 peptidase dimerisation domain protein K01439 - 3.5.1.18 0.00000000000000000000000000000000001634 149.0
SRR25158458_k127_3990422_2 Ion channel - - - 0.0000000000000002246 82.0
SRR25158458_k127_3990422_3 Bacterial Ig-like domain - - - 0.0000001313 65.0
SRR25158458_k127_3990422_4 - - - - 0.0000411 52.0
SRR25158458_k127_4011636_0 ATPases associated with a variety of cellular activities K02003 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003324 273.0
SRR25158458_k127_4011636_1 MacB-like periplasmic core domain K02004 - - 0.0000000000000000000000000000004955 132.0
SRR25158458_k127_4034348_0 Participates in initiation and elongation during chromosome replication K02314 - 3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001618 461.0
SRR25158458_k127_4034348_1 cysteine-tRNA ligase activity K01883 GO:0000166,GO:0003674,GO:0003824,GO:0004812,GO:0004817,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006423,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0017076,GO:0019538,GO:0019752,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0034645,GO:0034660,GO:0035639,GO:0036094,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0097159,GO:0097367,GO:0140098,GO:0140101,GO:1901265,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576 6.1.1.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001449 411.0
SRR25158458_k127_4034348_10 dUTPase K01494 - 3.5.4.13 0.0000000000000001978 81.0
SRR25158458_k127_4034348_11 Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection K09747 - - 0.00000000001338 68.0
SRR25158458_k127_4034348_12 Hep Hag repeat protein K01406,K21449 - 3.4.24.40 0.0000004622 63.0
SRR25158458_k127_4034348_2 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity K02343 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000002931 276.0
SRR25158458_k127_4034348_3 Peptidase dimerisation domain K01438,K01439 - 3.5.1.16,3.5.1.18 0.00000000000000000000000000000000000000000000000000000000000000003827 239.0
SRR25158458_k127_4034348_4 May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO K06187 - - 0.0000000000000000000000000000000000000000000000000000000616 203.0
SRR25158458_k127_4034348_5 Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis K00943 - 2.7.4.9 0.00000000000000000000000000000000000000005207 160.0
SRR25158458_k127_4034348_6 AI-2E family transporter - - - 0.00000000000000000000000000000000000823 150.0
SRR25158458_k127_4034348_7 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation K02935 - - 0.00000000000000000000000000000007142 128.0
SRR25158458_k127_4034348_8 PFAM phosphoesterase RecJ domain protein K06881 - 3.1.13.3,3.1.3.7 0.000000000000000000000000000003398 133.0
SRR25158458_k127_4034348_9 Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors K02864 - - 0.0000000000000000000000008893 111.0
SRR25158458_k127_41823_0 CHAP domain - - - 0.00000000000000000007297 102.0
SRR25158458_k127_41823_1 Belongs to the peptidase S41A family K03797 - 3.4.21.102 0.0000000000000001281 85.0
SRR25158458_k127_4281565_0 Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA) K01925 - 6.3.2.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000008562 302.0
SRR25158458_k127_4281565_1 Provides the (R)-glutamate required for cell wall biosynthesis K01776 - 5.1.1.3 0.00000000000000000000000000000000000001506 152.0
SRR25158458_k127_4281565_2 Insulinase (Peptidase family M16) - - - 0.0005698 52.0
SRR25158458_k127_4296774_0 Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro) K01881 GO:0003674,GO:0003824,GO:0004812,GO:0004827,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006433,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0017101,GO:0019538,GO:0019752,GO:0032991,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005397 353.0
SRR25158458_k127_4296774_1 Protein of unknown function (DUF475) K09799 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002783 270.0
SRR25158458_k127_4296774_2 Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome K02357 - - 0.00000000000000000000000000000000000000000000000000000000000000004857 228.0
SRR25158458_k127_4296774_3 Belongs to the universal ribosomal protein uS2 family K02967 GO:0000028,GO:0003674,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043167,GO:0043169,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046872,GO:0046914,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000002598 217.0
SRR25158458_k127_4296774_4 SMART PDZ DHR GLGF domain protein K11749 - - 0.000000000000000000000000000000000000000001326 171.0
SRR25158458_k127_4296774_5 Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another K02838 - - 0.0000000000000000000000000000000000816 140.0
SRR25158458_k127_4296774_6 CAAX protease self-immunity K07052,K09696 - - 0.000000000000153 79.0
SRR25158458_k127_439727_0 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001508 347.0
SRR25158458_k127_439727_1 Glycosyl transferases group 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000003892 241.0
SRR25158458_k127_439727_2 Glutathione synthase Ribosomal protein S6 modification enzyme (Glutaminyl transferase) K01955,K05844,K14940 - 6.3.2.32,6.3.5.5 0.000000000000000000000000000000002304 141.0
SRR25158458_k127_439727_3 Amylo-alpha-1,6-glucosidase - - - 0.0000000000000000000000000000005684 139.0
SRR25158458_k127_439727_4 MazG nucleotide pyrophosphohydrolase domain - - - 0.000000000000003747 77.0
SRR25158458_k127_439727_5 Belongs to the Nudix hydrolase family - - - 0.0000002829 57.0
SRR25158458_k127_439727_7 RNA methylase K07446 - 2.1.1.213 0.00003774 56.0
SRR25158458_k127_439727_8 - K15383 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0016020,GO:0016021,GO:0031224,GO:0042802,GO:0044425 - 0.0004623 46.0
SRR25158458_k127_4469732_0 ATPases associated with a variety of cellular activities K02003,K02004 - - 0.0000000000000000000000000000000000000000000000000002234 189.0
SRR25158458_k127_4469732_1 TIGRFAM type IV pilus assembly protein PilM K02662 - - 0.000000000000000000009531 104.0
SRR25158458_k127_4469732_2 Threonylcarbamoyl adenosine biosynthesis protein TsaE K06925 - - 0.0000000000000000005384 92.0
SRR25158458_k127_4469732_3 TIGRFAM nitrate transport ATP-binding subunits C and D K11953,K15579 - - 0.000000000006914 69.0
SRR25158458_k127_4469732_4 Universal bacterial protein YeaZ K14742 - - 0.0000000002651 66.0
SRR25158458_k127_4477939_0 Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor, and NADPH and FADH(2) as the reductant K03465 GO:0000166,GO:0003674,GO:0003824,GO:0004799,GO:0005488,GO:0008150,GO:0008152,GO:0008168,GO:0016740,GO:0016741,GO:0032259,GO:0036094,GO:0040007,GO:0042083,GO:0043167,GO:0043168,GO:0048037,GO:0050660,GO:0050661,GO:0050662,GO:0050797,GO:0070402,GO:0097159,GO:1901265,GO:1901363 2.1.1.148 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005644 325.0
SRR25158458_k127_4477939_1 Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release K02863 GO:0000470,GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006139,GO:0006364,GO:0006396,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016070,GO:0016072,GO:0019538,GO:0022613,GO:0022625,GO:0022626,GO:0032991,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0042254,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000000000000000002809 252.0
SRR25158458_k127_4477939_2 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors K02867 - - 0.000000000000000000000000000000000000001731 152.0
SRR25158458_k127_4477939_3 dUTPase K01494 - 3.5.4.13 0.00000000000000000002759 95.0
SRR25158458_k127_449569_0 Catalyzes the attachment of glycine to tRNA(Gly) K01880 GO:0003674,GO:0003824,GO:0004812,GO:0004820,GO:0005488,GO:0005515,GO:0016874,GO:0016875,GO:0046983,GO:0140098,GO:0140101 6.1.1.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003639 504.0
SRR25158458_k127_449569_1 DNA alkylation repair enzyme - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002016 273.0
SRR25158458_k127_449569_10 Integral membrane protein K07027,K20468 - - 0.0001718 51.0
SRR25158458_k127_449569_11 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03602 GO:0003674,GO:0003824,GO:0004518,GO:0004527,GO:0004529,GO:0004536,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006308,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008855,GO:0009056,GO:0009057,GO:0009318,GO:0009987,GO:0016787,GO:0016788,GO:0016796,GO:0016895,GO:0019439,GO:0032991,GO:0034641,GO:0034655,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0044424,GO:0044464,GO:0046483,GO:0046700,GO:0071704,GO:0090304,GO:0090305,GO:0140097,GO:1901360,GO:1901361,GO:1901575,GO:1902494 3.1.11.6 0.0002445 46.0
SRR25158458_k127_449569_2 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03601 - 3.1.11.6 0.00000000000000000000000000000000000000000000000000000000009226 218.0
SRR25158458_k127_449569_3 Belongs to the UPF0758 family K03630 - - 0.00000000000000000000000000000000000000000000000000000924 196.0
SRR25158458_k127_449569_4 NUDIX domain - - - 0.00000000000000000000000000000000000000000000000006677 183.0
SRR25158458_k127_449569_5 Belongs to the peptidase S51 family K05995 - 3.4.13.21 0.00000000000000000000000005176 116.0
SRR25158458_k127_449569_6 Involved in DNA repair and RecF pathway recombination K03584 - - 0.00000000000000002605 90.0
SRR25158458_k127_449569_7 Histidine kinase K10681 - 2.7.13.3 0.0000000000000001114 89.0
SRR25158458_k127_449569_8 Family with sequence similarity 173, member B - GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005740,GO:0005743,GO:0006464,GO:0006479,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008213,GO:0008276,GO:0008757,GO:0009987,GO:0016020,GO:0016278,GO:0016279,GO:0016740,GO:0016741,GO:0018022,GO:0018193,GO:0018205,GO:0019538,GO:0019866,GO:0030061,GO:0031090,GO:0031644,GO:0031646,GO:0031966,GO:0031967,GO:0031975,GO:0032259,GO:0036211,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0043414,GO:0044057,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044425,GO:0044429,GO:0044444,GO:0044446,GO:0044455,GO:0044464,GO:0048518,GO:0050789,GO:0051239,GO:0051240,GO:0051930,GO:0051931,GO:0065007,GO:0071704,GO:0140096,GO:1901564,GO:1904058 - 0.00000000001457 71.0
SRR25158458_k127_449569_9 PFAM response regulator receiver K07657 - - 0.0000000002389 66.0
SRR25158458_k127_451111_0 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K00012 - 1.1.1.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002101 452.0
SRR25158458_k127_451111_1 Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis K00973 GO:0000271,GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0005975,GO:0005976,GO:0005996,GO:0006006,GO:0006139,GO:0006220,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008879,GO:0009058,GO:0009059,GO:0009117,GO:0009141,GO:0009147,GO:0009200,GO:0009211,GO:0009219,GO:0009225,GO:0009226,GO:0009262,GO:0009394,GO:0009987,GO:0016020,GO:0016051,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019299,GO:0019300,GO:0019305,GO:0019318,GO:0019319,GO:0019438,GO:0019637,GO:0019692,GO:0030312,GO:0033692,GO:0034637,GO:0034641,GO:0034645,GO:0034654,GO:0040007,GO:0043167,GO:0043169,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044262,GO:0044264,GO:0044271,GO:0044281,GO:0044283,GO:0044464,GO:0045226,GO:0046075,GO:0046364,GO:0046379,GO:0046383,GO:0046483,GO:0046872,GO:0055086,GO:0071704,GO:0071944,GO:0072527,GO:1901135,GO:1901137,GO:1901360,GO:1901362,GO:1901564,GO:1901576 2.7.7.24 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003194 421.0
SRR25158458_k127_451111_2 GDP-mannose 4,6 dehydratase K01710 - 4.2.1.46 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002472 382.0
SRR25158458_k127_451111_3 Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose K00067,K01790 - 1.1.1.133,5.1.3.13 0.000000000000000000000000004259 113.0
SRR25158458_k127_4527749_0 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03043 - 2.7.7.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006396 308.0
SRR25158458_k127_4527749_1 Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins K01358 - 3.4.21.92 0.000000000000000000000000000000000000000000000000000000000000000000000000005562 257.0
SRR25158458_k127_4554993_0 amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner K01873 - 6.1.1.9 0.000000000000000000000000000000000000000000000002373 179.0
SRR25158458_k127_4554993_1 Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan K01928 - 6.3.2.13 0.00000000000000000000002963 113.0
SRR25158458_k127_4554993_2 Mur ligase family, catalytic domain K01928 - 6.3.2.13 0.0002646 46.0
SRR25158458_k127_4591300_0 CobQ CobB MinD ParA nucleotide binding domain K03496 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000008124 279.0
SRR25158458_k127_4591300_1 PDZ domain (Also known as DHR or GLGF) - - - 0.000000000000000000000000000000000000000000000000000000000000000000002919 249.0
SRR25158458_k127_4591300_2 Belongs to the ParB family K03497 - - 0.0000000000000000000000000000000000000000000000000000000000001069 223.0
SRR25158458_k127_4591300_3 nUDIX hydrolase K08312 GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0019144,GO:0043167,GO:0043169,GO:0044424,GO:0044444,GO:0044464,GO:0046872 - 0.0000000000000000000000000000367 124.0
SRR25158458_k127_4591300_4 Belongs to the peptidase S26 family K03100 - 3.4.21.89 0.00000000000000000000007536 109.0
SRR25158458_k127_4591300_5 transcriptional - - - 0.0000000000000000009481 101.0
SRR25158458_k127_4591300_6 This protein binds to 23S rRNA in the presence of protein L20 K02888 GO:0003674,GO:0003735,GO:0005198 - 0.00000000000034 73.0
SRR25158458_k127_4591300_7 Succinylglutamate desuccinylase / Aspartoacylase family - - - 0.0000000000454 72.0
SRR25158458_k127_4621322_0 Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone K03168 - 5.99.1.2 1.115e-258 820.0
SRR25158458_k127_4621322_1 GTPase that plays an essential role in the late steps of ribosome biogenesis K03977 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002017 332.0
SRR25158458_k127_4621322_2 TIGRFAM DNA protecting protein DprA K04096 - - 0.00000000000000000000000000000000000000000000000000000001635 207.0
SRR25158458_k127_4621322_3 The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis K01056 - 3.1.1.29 0.000000000000000000000000000000000000004016 153.0
SRR25158458_k127_4621322_4 Belongs to the pseudouridine synthase RsuA family K06178 - 5.4.99.22 0.0000000000000000000000000000000000001071 151.0
SRR25158458_k127_4621322_5 His Kinase A (phosphoacceptor) domain K20974 - 2.7.13.3 0.0000000000000000000000000000007775 127.0
SRR25158458_k127_4621322_6 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K07658 - - 0.000000000000000001685 96.0
SRR25158458_k127_4658104_0 Carbohydrate binding domain K01183 - 3.2.1.14 9.161e-211 668.0
SRR25158458_k127_4658104_1 Glycosyl transferase family group 2 - - - 4.03e-204 640.0
SRR25158458_k127_4658104_2 UTP--glucose-1-phosphate uridylyltransferase K00963 - 2.7.7.9 0.00000000000000000000000000174 113.0
SRR25158458_k127_4670730_0 NUDIX domain - - - 0.000000000000002933 83.0
SRR25158458_k127_4670730_1 Bacteriocin-protection, YdeI or OmpD-Associated - - - 0.0004391 44.0
SRR25158458_k127_4670730_2 protein secretion K01218 - 3.2.1.78 0.0009663 51.0
SRR25158458_k127_47052_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 7.499e-256 799.0
SRR25158458_k127_47052_1 (ABC) transporter K06147,K12531 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000164 437.0
SRR25158458_k127_47052_2 Membrane-associated protein K03975 - - 0.0000000000000000000000000000000000000000000000000000000000004025 217.0
SRR25158458_k127_47052_3 This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance K02897 GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008097,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000003728 87.0
SRR25158458_k127_47052_4 nucleoside 2-deoxyribosyltransferase - GO:0003674,GO:0003824,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009123,GO:0009125,GO:0009159,GO:0009162,GO:0009987,GO:0016787,GO:0016798,GO:0016799,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0046434,GO:0046483,GO:0046700,GO:0055086,GO:0070694,GO:0071704,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901575,GO:1901576 - 0.000179 51.0
SRR25158458_k127_4802457_0 Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates K10563 - 3.2.2.23,4.2.99.18 0.0000000000000000000000000000000000000000000000000000000000001078 222.0
SRR25158458_k127_4802457_1 IA, variant 3 K07025 - - 0.000000000000000000003672 100.0
SRR25158458_k127_4802457_2 DNA-directed DNA polymerase activity K02340 - 2.7.7.7 0.0000000000000000005783 98.0
SRR25158458_k127_4802457_3 Binds directly to 16S ribosomal RNA K02968 - - 0.0000386 51.0
SRR25158458_k127_4853268_0 Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis K01689 - 4.2.1.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008599 491.0
SRR25158458_k127_4853268_1 Glycosyl hydrolase family 3 N terminal domain K01207 - 3.2.1.52 0.00000000000000000000000000000000000000000000000000001429 202.0
SRR25158458_k127_4853268_2 Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate K01834 - 5.4.2.11 0.000000000000000000000000000000000000000000001913 172.0
SRR25158458_k127_4895735_0 Nicotianamine synthase protein - - - 0.000000000000000000000000000004619 129.0
SRR25158458_k127_4895735_1 cobalamin synthesis protein - - - 0.00000000000004848 82.0
SRR25158458_k127_4903540_0 Psort location CytoplasmicMembrane, score - - - 0.000000000000000000000000000002802 127.0
SRR25158458_k127_4903540_1 - - - - 0.000000000000000000000000000003359 124.0
SRR25158458_k127_4903540_2 Sortase family K07284 - 3.4.22.70 0.00000002306 66.0
SRR25158458_k127_4910100_0 Endonuclease/Exonuclease/phosphatase family - - - 0.0000000000000000000000000000000000000000000000000000000000002278 221.0
SRR25158458_k127_4910100_1 PFAM TspO MBR family K05770 - - 0.0000000000000000000000000000000000000000003292 163.0
SRR25158458_k127_4910100_2 Major facilitator Superfamily K08221 - - 0.0000009782 58.0
SRR25158458_k127_4910100_3 Nudix hydrolase K18447 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0009507,GO:0009532,GO:0009536,GO:0009570,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0019144,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464,GO:0080041,GO:0080042 3.6.1.21 0.00003004 54.0
SRR25158458_k127_562526_0 RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication K02316 GO:0003674,GO:0003824,GO:0003896,GO:0003899,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006269,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009059,GO:0009987,GO:0016020,GO:0016070,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0032774,GO:0034062,GO:0034641,GO:0034645,GO:0034654,GO:0040007,GO:0043167,GO:0043169,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044464,GO:0046483,GO:0046872,GO:0046914,GO:0071704,GO:0071944,GO:0090304,GO:0097747,GO:0140098,GO:1901360,GO:1901362,GO:1901576 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002994 282.0
SRR25158458_k127_562526_1 3'-to-5' exoribonuclease specific for small oligoribonucleotides K13288 GO:0000175,GO:0003674,GO:0003824,GO:0004518,GO:0004527,GO:0004532,GO:0004540,GO:0006139,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008408,GO:0009987,GO:0016070,GO:0016787,GO:0016788,GO:0016796,GO:0016896,GO:0034641,GO:0040007,GO:0043170,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090503,GO:0140098,GO:1901360 - 0.00000000000000000000000000000000003617 140.0
SRR25158458_k127_562526_2 YjbR - - - 0.0000000000000000000000000000004236 124.0
SRR25158458_k127_571184_0 PFAM Glycosyl transferase, family 2 K21304 GO:0003674,GO:0003824,GO:0016740 2.4.1.153 0.00000000000000000000000000000000000004042 154.0
SRR25158458_k127_571184_1 Methionine biosynthesis protein MetW - - - 0.000000000000008189 81.0
SRR25158458_k127_63876_0 Glycosyl transferase, family 2 K07011,K20444 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002922 459.0
SRR25158458_k127_63876_1 it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids K02313 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002113 383.0
SRR25158458_k127_63876_10 COG0739 Membrane proteins related to metalloendopeptidases - - - 0.000000000000007397 77.0
SRR25158458_k127_63876_11 Belongs to the bacterial ribosomal protein bL34 family K02914 - - 0.00000000004782 63.0
SRR25158458_k127_63876_12 NUDIX domain - - - 0.00000005252 61.0
SRR25158458_k127_63876_13 Peptidase family M23 - - - 0.000001279 61.0
SRR25158458_k127_63876_2 ABC transporter, ATP-binding protein K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001835 305.0
SRR25158458_k127_63876_3 Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria K02338 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000001218 243.0
SRR25158458_k127_63876_4 Transport permease protein K01992 - - 0.00000000000000000000000000000000000000000000000000000000000000008678 231.0
SRR25158458_k127_63876_5 3-demethylubiquinone-9 3-O-methyltransferase activity K20444 - - 0.0000000000000000000000000000000000000000000000000000000009625 207.0
SRR25158458_k127_63876_6 it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP K03629 - - 0.000000000000000000000000000000000000000000000008583 185.0
SRR25158458_k127_63876_7 PFAM Glycosyl transferase, group 1 - - - 0.00000000000000000000000000000000000000000822 168.0
SRR25158458_k127_63876_8 Putative single-stranded nucleic acids-binding domain K06346 - - 0.00000000000000008499 87.0
SRR25158458_k127_63876_9 Psort location CytoplasmicMembrane, score K03217 - - 0.000000000000005844 85.0
SRR25158458_k127_641115_0 Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction K00962 GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003824,GO:0004654,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006401,GO:0006402,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009892,GO:0009987,GO:0010468,GO:0010605,GO:0010629,GO:0016070,GO:0016071,GO:0016740,GO:0016772,GO:0016779,GO:0019222,GO:0019439,GO:0034641,GO:0034655,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0044424,GO:0044464,GO:0046483,GO:0046700,GO:0048519,GO:0050789,GO:0060255,GO:0065007,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901361,GO:1901363,GO:1901575 2.7.7.8 3.856e-201 647.0
SRR25158458_k127_641115_1 An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay K12574 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004065 476.0
SRR25158458_k127_641115_2 FtsK SpoIIIE family protein K03466 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000703 432.0
SRR25158458_k127_641115_3 Belongs to the UPF0234 family K09767 - - 0.00000000000000000000000000000000000004395 148.0
SRR25158458_k127_641115_4 3-demethylubiquinone-9 3-O-methyltransferase activity - - - 0.0000000000000000000000000000000000002979 151.0
SRR25158458_k127_641115_5 PFAM transposase IS116 IS110 IS902 family protein - - - 0.0000000000000000000000000000009076 134.0
SRR25158458_k127_641115_6 Transposase IS200 like - - - 0.0000000000000000000000002 113.0
SRR25158458_k127_641115_7 TIGRFAM phage SPO1 DNA polymerase-related protein K21929 - 3.2.2.27 0.0000000000006403 72.0
SRR25158458_k127_641115_8 TIGRFAM phage SPO1 DNA polymerase-related protein K21929 GO:0003674,GO:0003824,GO:0004844,GO:0005488,GO:0006139,GO:0006259,GO:0006281,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016787,GO:0016798,GO:0016799,GO:0019104,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0048037,GO:0050896,GO:0051536,GO:0051539,GO:0051540,GO:0051716,GO:0071704,GO:0090304,GO:0097506,GO:0140097,GO:1901360 3.2.2.27 0.00000002794 56.0
SRR25158458_k127_641115_9 phenylacetate-CoA ligase activity - - - 0.0005125 49.0
SRR25158458_k127_649377_0 This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center K02933 - - 0.000000000000000000000000000000000000000000000000000000000005417 212.0
SRR25158458_k127_649377_1 The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently K03076 GO:0005575,GO:0005576,GO:0005623,GO:0005886,GO:0008150,GO:0016020,GO:0040007,GO:0044464,GO:0071944 - 0.00000000000000000000000000000000000000000000000000000000003992 218.0
SRR25158458_k127_649377_10 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A K02876 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.0000000000000000004235 93.0
SRR25158458_k127_649377_11 One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit K02895 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000033 82.0
SRR25158458_k127_649377_2 Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome K02874 - - 0.000000000000000000000000000000000000000000000000000007288 193.0
SRR25158458_k127_649377_3 This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits K02931 GO:0000027,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000002395 188.0
SRR25158458_k127_649377_4 Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs K02878 - - 0.000000000000000000000000000000000000000000000753 167.0
SRR25158458_k127_649377_5 Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body K02988 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000769 162.0
SRR25158458_k127_649377_6 One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit K02994 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015935,GO:0022626,GO:0022627,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.0000000000000000000000000000000002659 136.0
SRR25158458_k127_649377_7 Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site K02954 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000001891 127.0
SRR25158458_k127_649377_8 This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance K02881 GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0008097,GO:0015934,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0097159,GO:1901363,GO:1990904 - 0.00000000000000000000000001139 113.0
SRR25158458_k127_649377_9 One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA K02961 - - 0.00000000000000000001428 95.0
SRR25158458_k127_719002_0 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005611 415.0
SRR25158458_k127_719002_1 Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair K03503 - - 0.000000000000000000000000000006548 123.0
SRR25158458_k127_719002_2 COG0791 Cell wall-associated hydrolases invasion-associated proteins K21471 - - 0.000000000001045 74.0
SRR25158458_k127_719002_3 nucleotidyltransferase DNA polymerase involved in DNA repair K03502 - - 0.0000000001231 61.0
SRR25158458_k127_719002_4 oxidoreductase activity - - - 0.00000000103 68.0
SRR25158458_k127_870390_0 PFAM Glycoside hydrolase, family 37 K01194 - 3.2.1.28 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003065 469.0
SRR25158458_k127_870390_1 Psort location Cytoplasmic, score 8.87 - - - 0.00000000000000000000000000000000000000002774 165.0
SRR25158458_k127_871302_0 tyrosine recombinase XerC K03733 - - 0.000000000000000000000000000000000000000000000009625 183.0
SRR25158458_k127_873596_0 Belongs to the UPF0176 family K07146 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001945 422.0
SRR25158458_k127_873596_1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision K03703 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003997 314.0
SRR25158458_k127_873596_10 P-P-bond-hydrolysis-driven protein transmembrane transporter activity K03075 GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0006605,GO:0006612,GO:0006613,GO:0006614,GO:0006616,GO:0006810,GO:0006886,GO:0008104,GO:0008150,GO:0008320,GO:0008565,GO:0009987,GO:0015031,GO:0015833,GO:0016020,GO:0016043,GO:0022857,GO:0022884,GO:0031522,GO:0032978,GO:0032991,GO:0033036,GO:0033365,GO:0034613,GO:0042886,GO:0042887,GO:0043952,GO:0044464,GO:0045047,GO:0045184,GO:0046907,GO:0051179,GO:0051205,GO:0051234,GO:0051641,GO:0051649,GO:0055085,GO:0061024,GO:0065002,GO:0070727,GO:0070972,GO:0071702,GO:0071705,GO:0071806,GO:0071840,GO:0071944,GO:0072594,GO:0072599,GO:0072657,GO:0090150,GO:1904680 - 0.00009331 47.0
SRR25158458_k127_873596_2 Resolvase, N terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002204 265.0
SRR25158458_k127_873596_3 PFAM extracellular solute-binding protein, family 5 K02035 - - 0.00000000000000000000000000000000000000000000000000000000000004385 235.0
SRR25158458_k127_873596_4 TraX protein - - - 0.0000000000000000000000000000000001054 141.0
SRR25158458_k127_873596_5 - - - - 0.000000000000000008713 85.0
SRR25158458_k127_873596_6 Ribonuclease toxin, BrnT, of type II toxin-antitoxin system - - - 0.000000000000001678 83.0
SRR25158458_k127_873596_7 Mycobacterial 4 TMS phage holin, superfamily IV K08972 - - 0.00000000000004268 77.0
SRR25158458_k127_873596_8 gluconokinase activity - - - 0.00000000000005512 79.0
SRR25158458_k127_873596_9 - - - - 0.00000000001227 70.0
SRR25158458_k127_885528_0 Predicted membrane protein (DUF2206) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000006812 282.0
SRR25158458_k127_885528_1 Glycosyl transferase 4-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000005222 269.0
SRR25158458_k127_885528_2 Glycosyl transferases group 1 - - - 0.00000000000000000000000000000000000000000000000000000000000002605 231.0
SRR25158458_k127_885528_3 COG0438 Glycosyltransferase - - - 0.00000000000000000000000000000000000000000000000000000001447 213.0
SRR25158458_k127_885528_4 Cellulase (glycosyl hydrolase family 5) - - - 0.000000000000000000000000000000000000000000000000000000112 209.0
SRR25158458_k127_885528_5 - - - - 0.000000000000000000000000000000000000000000000397 173.0
SRR25158458_k127_885528_6 COG0463 Glycosyltransferases involved in cell wall biogenesis K00721 - 2.4.1.83 0.00000000000000000000000000000000001358 155.0
SRR25158458_k127_885528_8 to orf3 of fosmid clone 4B7mr3 - - - 0.00003749 48.0
SRR25158458_k127_900652_0 ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner K06942 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000914 275.0
SRR25158458_k127_900652_1 FtsJ-like methyltransferase K06442 - 2.1.1.226,2.1.1.227 0.0000000000000000000000000000000000000000000000002803 184.0
SRR25158458_k127_900652_2 Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase K02356 - - 0.00000000000000000000000000000000000000000000006038 175.0
SRR25158458_k127_900652_3 Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism K03111 - - 0.00000000000000000000000000000000006952 139.0
SRR25158458_k127_900652_4 Binds together with S18 to 16S ribosomal RNA K02990 - - 0.00000000000001948 77.0
SRR25158458_k127_900652_5 Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit K02963 - - 0.000000000002662 68.0
SRR25158458_k127_902757_0 Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its highly electrophilic allylic isomer, dimethylallyl diphosphate (DMAPP) K01823 GO:0003674,GO:0003824,GO:0004452,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006629,GO:0006644,GO:0006720,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0008654,GO:0009058,GO:0009240,GO:0009987,GO:0016853,GO:0016860,GO:0016863,GO:0019637,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044424,GO:0044464,GO:0046490,GO:0071704,GO:0090407,GO:1901576 5.3.3.2 0.000000000000000000000000000000000000000000000000889 180.0
SRR25158458_k127_902757_2 Belongs to the FPP GGPP synthase family K13787 - 2.5.1.1,2.5.1.10,2.5.1.29 0.00000000000000000000000000002898 129.0
SRR25158458_k127_915933_0 Involved in the binding of tRNA to the ribosomes K02946 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000003404 149.0
SRR25158458_k127_915933_1 ATPase associated with various cellular activities AAA_5 - - - 0.000003528 56.0
SRR25158458_k127_925352_0 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing K03551 GO:0006950,GO:0006974,GO:0007154,GO:0008150,GO:0009432,GO:0009605,GO:0009987,GO:0009991,GO:0031668,GO:0033554,GO:0050896,GO:0051716,GO:0071496 3.6.4.12 0.000000000000000000000000000000000000000000000000000000006279 203.0
SRR25158458_k127_925352_1 Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group K01159 - 3.1.22.4 0.000000000000000000000000000000000000000000000000004582 185.0
SRR25158458_k127_925352_2 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB K03550 - 3.6.4.12 0.000000000000000000000000000000003862 135.0
SRR25158458_k127_925352_3 PFAM PRC-barrel domain - - - 0.00001237 55.0