GWM
Global Wetland Microbiome Database
Overview
| ID | SMP0004 |
|---|---|
| Name | BYDH1 |
| Type | lake |
| Habitat | sediment |
| Country | China |
| Latitude and longitude | 38.947222 N 115.991667 E |
| Altitude (m) | -3.6 |
| Instrument | illumina NovaSeq X Plus |
| AvgSpotLen (bp) | 300 |
| LibraryLayout | PAIRED |
| Project | PRJNA1430164 |
| Collection Date | 2025-04-23 |
| Physicochemical properties | |
| TN (g/kg) | 3.7155 |
| TP (g/kg) | 0.7085 |
| TS (g/kg) | 4.6000 |
| TC (g/kg) | 51.7360 |
| Fe (mg/kg) | 34808.9857 |
| Mn (mg/kg) | 604.0490 |
| C/N | |
| IC (g/kg) | |
| MBC (g/kg) | 0.4697 |
| pH | 7.0700 |
| Water content (%) | 0.6901 |
| NO3- (mg/kg) | 7.5782 |
| NH4+ (mg/kg) | 1.4896 |
Location
Community profile
The microbial community profiled by MetaPhlAn4
MAGs16
The MAGs in SMP0004
| ID | Name | Taxonomy | Completeness | Contamination | GC | N50 | Size |
|---|---|---|---|---|---|---|---|
| MAG00147 | BYDH1_bin.1 | d__Bacteria;p__Bacteroidota_A;c__UBA10030;o__UBA10030;f__UBA10030;g__;s__ | 94.29 | 0.25 | 60.0 | 29,905 | 2,967,907 |
| MAG00148 | BYDH1_bin.12 | d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Flavobacteriaceae;g__Lutimonas;s__ | 64.65 | 1.67 | 41.0 | 2,908 | 1,626,084 |
| MAG00149 | BYDH1_bin.15 | d__Bacteria;p__Bacteroidota_A;c__UBA10030;o__UBA10030;f__SZUA-254;g__;s__ | 71.21 | 1.46 | 48.0 | 4,412 | 1,950,199 |
| MAG00150 | BYDH1_bin.16 | d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Burkholderiales;f__Thiobacillaceae;g__PFJX01;s__ | 82.58 | 3.38 | 64.0 | 3,655 | 1,966,298 |
| MAG00151 | BYDH1_bin.18 | d__Bacteria;p__Chloroflexota;c__Anaerolineae;o__Anaerolineales;f__Villigracilaceae;g__VGNO01;s__ | 80.81 | 0.65 | 57.0 | 5,757 | 2,494,031 |
| MAG00152 | BYDH1_bin.21 | d__Bacteria;p__Chloroflexota;c__Anaerolineae;o__Fen-1058;f__Fen-1058;g__Fen-1058;s__ | 68.96 | 3.28 | 59.0 | 5,223 | 5,015,519 |
| MAG00153 | BYDH1_bin.23 | d__Bacteria;p__Acidobacteriota;c__Aminicenantia;o__UBA2199;f__UBA2199;g__;s__ | 76.1 | 3.75 | 53.0 | 3,661 | 3,108,613 |
| MAG00154 | BYDH1_bin.27 | d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__VadinHA17;g__SR-FBR-E99;s__SR-FBR-E99 sp025455395 | 95.38 | 0.73 | 47.0 | 27,437 | 2,872,313 |
| MAG00155 | BYDH1_bin.28 | d__Bacteria;p__Desulfobacterota;c__Desulfomonilia;o__UBA1062;f__UBA1062;g__MWEI01;s__MWEI01 sp025454155 | 84.73 | 1.8 | 59.0 | 7,937 | 2,619,516 |
| MAG00156 | BYDH1_bin.3 | d__Archaea;p__Thermoplasmatota;c__E2;o__DHVEG-1;f__DHVEG-1;g__SM1-50;s__ | 67.01 | 0.57 | 38.0 | 9,937 | 772,016 |
| MAG00157 | BYDH1_bin.30 | d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Burkholderiales;f__Nitrosomonadaceae;g__Nitrosomonas;s__ | 92.68 | 1.33 | 45.0 | 19,044 | 2,288,741 |
| MAG00158 | BYDH1_bin.31 | d__Archaea;p__Thermoplasmatota;c__EX4484-6;o__EX4484-6;f__EX4484-6;g__JALOTP01;s__ | 80.65 | 0.44 | 54.0 | 3,726 | 1,891,919 |
| MAG00159 | BYDH1_bin.32 | d__Bacteria;p__Zhuqueibacterota;c__Zhuqueibacteria;o__Residuimicrobiales;f__Krinioviventaceae;g__Kriniovivens;s__ | 87.92 | 3.05 | 47.0 | 4,414 | 4,487,729 |
| MAG00160 | BYDH1_bin.33 | d__Bacteria;p__Patescibacteriota;c__Minisyncoccia;o__Moranbacterales;f__UBA1568;g__JAGOTT01;s__ | 91.73 | 3.24 | 59.0 | 16,042 | 893,311 |
| MAG00161 | BYDH1_bin.35 | d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__SG8-11;f__SG8-11;g__UBA6921;s__ | 82.69 | 0.93 | 59.0 | 8,954 | 2,234,612 |
| MAG00162 | BYDH1_bin.8 | d__Bacteria;p__Chloroflexota;c__Anaerolineae;o__Anaerolineales;f__Villigracilaceae;g__UBA877;s__ | 78.95 | 2.47 | 57.0 | 11,399 | 3,178,762 |
| ID | Name | Taxonomy | Completeness | Contamination | GC | N50 | Size |