GWM
Global Wetland Microbiome Database
Overview
| ID | SMP0005 |
|---|---|
| Name | BYDH2 |
| Type | lake |
| Habitat | sediment |
| Country | China |
| Latitude and longitude | 38.947222 N 115.991667 E |
| Altitude (m) | -3.6 |
| Instrument | illumina NovaSeq X Plus |
| AvgSpotLen (bp) | 300 |
| LibraryLayout | PAIRED |
| Project | PRJNA1430164 |
| Collection Date | 2025-04-23 |
| Physicochemical properties | |
| TN (g/kg) | 3.8427 |
| TP (g/kg) | 0.8091 |
| TS (g/kg) | 3.5740 |
| TC (g/kg) | 54.9850 |
| Fe (mg/kg) | 43452.1625 |
| Mn (mg/kg) | 669.2661 |
| C/N | |
| IC (g/kg) | |
| MBC (g/kg) | 0.4505 |
| pH | 7.1000 |
| Water content (%) | 0.6890 |
| NO3- (mg/kg) | 4.1943 |
| NH4+ (mg/kg) | 1.6168 |
Location
Community profile
The microbial community profiled by MetaPhlAn4
MAGs15
The MAGs in SMP0005
| ID | Name | Taxonomy | Completeness | Contamination | GC | N50 | Size |
|---|---|---|---|---|---|---|---|
| MAG00163 | BYDH2_bin.10 | d__Bacteria;p__Armatimonadota;c__Fimbriimonadia;o__Fimbriimonadales;f__Fimbriimonadaceae;g__55-13;s__ | 73.58 | 2.94 | 59.0 | 3,412 | 2,560,469 |
| MAG00164 | BYDH2_bin.11 | d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Burkholderiales;f__Nitrosomonadaceae;g__Nitrosomonas;s__ | 82.61 | 0.0 | 45.0 | 11,922 | 2,127,966 |
| MAG00165 | BYDH2_bin.13 | d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__VadinHA17;g__SR-FBR-E99;s__SR-FBR-E99 sp025455395 | 97.15 | 3.12 | 47.0 | 27,213 | 2,988,969 |
| MAG00166 | BYDH2_bin.16 | d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Pseudomonadales;f__DT-91;g__DATCSZ01;s__ | 81.59 | 1.73 | 52.0 | 8,167 | 2,013,878 |
| MAG00167 | BYDH2_bin.17 | d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__SG8-11;f__SG8-11;g__UBA6921;s__ | 61.23 | 1.49 | 59.0 | 3,821 | 1,850,114 |
| MAG00168 | BYDH2_bin.21 | d__Bacteria;p__Bacteroidota_A;c__UBA10030;o__UBA10030;f__UBA8401;g__UBA8401;s__ | 87.09 | 2.4 | 47.0 | 5,125 | 2,531,188 |
| MAG00169 | BYDH2_bin.22 | d__Bacteria;p__Zhuqueibacterota;c__Zhuqueibacteria;o__Residuimicrobiales;f__Krinioviventaceae;g__Kriniovivens;s__ | 63.97 | 2.66 | 47.0 | 1,960 | 2,983,013 |
| MAG00170 | BYDH2_bin.23 | d__Bacteria;p__CLD3;c__CLD3;o__SB21;f__SB21;g__SB21;s__ | 94.93 | 3.48 | 46.0 | 12,019 | 2,897,505 |
| MAG00171 | BYDH2_bin.24 | d__Bacteria;p__Patescibacteriota;c__Minisyncoccia;o__Moranbacterales;f__UBA1568;g__JAGOTT01;s__ | 84.42 | 3.02 | 58.0 | 6,026 | 791,957 |
| MAG00172 | BYDH2_bin.28 | d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Chitinophagales;f__Saprospiraceae;g__Vicinibacter;s__ | 89.96 | 0.98 | 50.0 | 5,793 | 2,712,460 |
| MAG00173 | BYDH2_bin.3 | d__Bacteria;p__Patescibacteriota;c__Patescibacteriia;o__UBA11705;f__UBA11705;g__;s__ | 87.88 | 2.64 | 48.0 | 6,335 | 1,031,816 |
| MAG00174 | BYDH2_bin.4 | d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__VadinHA17;g__LD21;s__ | 76.17 | 3.2 | 45.0 | 6,112 | 1,922,285 |
| MAG00175 | BYDH2_bin.7 | d__Bacteria;p__Patescibacteriota;c__Gracilibacteria;o__UM-FILTER-43-11;f__UM-FILTER-43-11;g__FEN-1329;s__ | 77.59 | 2.57 | 52.0 | 3,041 | 918,531 |
| MAG00176 | BYDH2_bin.8 | d__Bacteria;p__Myxococcota;c__Polyangia;o__Polyangiales;f__JAFGIB01;g__;s__ | 71.18 | 4.05 | 62.0 | 2,577 | 3,104,671 |
| MAG00177 | BYDH2_bin.9 | d__Bacteria;p__Nitrospirota;c__Nitrospiria;o__Nitrospirales;f__Nitrospiraceae;g__Nitrospira_D;s__ | 62.19 | 1.34 | 58.0 | 5,320 | 1,894,788 |
| ID | Name | Taxonomy | Completeness | Contamination | GC | N50 | Size |