GWM
Global Wetland Microbiome Database
Overview
| ID | SMP0009 |
|---|---|
| Name | CH3 |
| Type | lake |
| Habitat | sediment |
| Country | China |
| Latitude and longitude | 31.67204 N 117.36078 E |
| Altitude (m) | 6.0 |
| Instrument | illumina NovaSeq X Plus |
| AvgSpotLen (bp) | 300 |
| LibraryLayout | PAIRED |
| Project | PRJNA1430164 |
| Collection Date | 2025-04-10 |
| Physicochemical properties | |
| TN (g/kg) | 0.9088 |
| TP (g/kg) | 0.8652 |
| TS (g/kg) | 0.2227 |
| TC (g/kg) | 9.1900 |
| Fe (mg/kg) | 17650.3068 |
| Mn (mg/kg) | 532.7198 |
| C/N | 10.1119 |
| IC (g/kg) | 1.3320 |
| MBC (g/kg) | 0.6215 |
| pH | 7.6000 |
| Water content (%) | 0.4210 |
| NO3- (mg/kg) | 2.4129 |
| NH4+ (mg/kg) | 57.2316 |
Location
Community profile
The microbial community profiled by MetaPhlAn4
MAGs24
The MAGs in SMP0009
| ID | Name | Taxonomy | Completeness | Contamination | GC | N50 | Size |
|---|---|---|---|---|---|---|---|
| MAG00266 | CH3_bin.1 | d__Bacteria;p__Cyanobacteriota;c__Cyanobacteriia;o__Cyanobacteriales;f__Microcystaceae;g__Microcystis;s__Microcystis aeruginosa | 99.18 | 1.69 | 43.0 | 3,968 | 4,748,285 |
| MAG00267 | CH3_bin.12 | d__Bacteria;p__Actinomycetota;c__Acidimicrobiia;o__Acidimicrobiales;f__Ilumatobacteraceae;g__Casp-actino8;s__ | 78.07 | 0.21 | 55.0 | 5,112 | 1,581,211 |
| MAG00268 | CH3_bin.17 | d__Bacteria;p__Bacteroidota_A;c__UBA10030;o__UBA10030;f__UBA6906;g__CAADGV01;s__ | 71.95 | 2.12 | 53.0 | 4,091 | 2,043,987 |
| MAG00269 | CH3_bin.18 | d__Bacteria;p__Chloroflexota;c__Anaerolineae;o__Anaerolineales;f__Villigracilaceae;g__JBGPQJ01;s__ | 85.83 | 5.54 | 55.0 | 10,374 | 4,325,917 |
| MAG00270 | CH3_bin.2 | d__Bacteria;p__Planctomycetota;c__Phycisphaerae;o__Sedimentisphaerales;f__Anaerohalosphaeraceae;g__UBA7708;s__ | 85.8 | 3.38 | 49.0 | 5,369 | 2,492,749 |
| MAG00271 | CH3_bin.26 | d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Burkholderiales;f__Casimicrobiaceae;g__CAIWHR01;s__ | 81.95 | 0.29 | 67.0 | 6,738 | 2,562,127 |
| MAG00272 | CH3_bin.30 | d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Burkholderiales;f__UBA6910;g__UBA6910;s__ | 64.14 | 1.28 | 68.0 | 3,822 | 2,126,291 |
| MAG00273 | CH3_bin.31 | d__Bacteria;p__Bacteroidota_A;c__UBA10030;o__UBA10030;f__UBA10030;g__;s__ | 78.84 | 0.73 | 59.0 | 12,883 | 2,438,124 |
| MAG00274 | CH3_bin.32 | d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Acidiferrobacterales;f__UBA6901;g__UBA6901;s__ | 77.38 | 1.88 | 62.0 | 34,010 | 2,266,779 |
| MAG00275 | CH3_bin.34 | d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Beggiatoales;f__Beggiatoaceae;g__;s__ | 93.27 | 2.4 | 36.0 | 3,263 | 2,572,196 |
| MAG00276 | CH3_bin.37 | d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Methylococcales;f__Methylomonadaceae;g__;s__ | 76.33 | 2.92 | 53.0 | 6,756 | 2,428,677 |
| MAG00277 | CH3_bin.38 | d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Pseudomonadales;f__Moraxellaceae;g__UBA2031;s__UBA2031 sp003543245 | 92.17 | 3.91 | 58.0 | 6,068 | 2,340,614 |
| MAG00278 | CH3_bin.43 | d__Bacteria;p__Verrucomicrobiota;c__Verrucomicrobiia;o__Limisphaerales;f__UBA11358;g__WYBW01;s__ | 90.91 | 6.4 | 60.0 | 14,049 | 6,910,925 |
| MAG00279 | CH3_bin.44 | d__Bacteria;p__Acidobacteriota;c__Vicinamibacteria;o__Fen-336;f__Fen-336;g__DATECU01;s__ | 96.02 | 0.49 | 70.0 | 9,414 | 5,117,773 |
| MAG00280 | CH3_bin.48 | d__Bacteria;p__Chloroflexota;c__Anaerolineae;o__Anaerolineales;f__Villigracilaceae;g__Defluviilinea;s__ | 89.64 | 6.61 | 50.0 | 8,553 | 4,801,333 |
| MAG00281 | CH3_bin.49 | d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Burkholderiales;f__Nitrosomonadaceae;g__Nitrosomonas;s__ | 80.45 | 3.46 | 45.0 | 9,197 | 1,973,591 |
| MAG00282 | CH3_bin.53 | d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__JALORV01;s__ | 70.55 | 1.94 | 67.0 | 11,485 | 1,679,563 |
| MAG00283 | CH3_bin.56 | d__Bacteria;p__Verrucomicrobiota;c__Verrucomicrobiia;o__Palsa-1439;f__;g__;s__ | 95.77 | 2.22 | 61.0 | 11,758 | 4,009,217 |
| MAG00284 | CH3_bin.57 | d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Burkholderiales;f__JBBRTU01;g__JBBRTU01;s__ | 63.9 | 1.94 | 55.0 | 6,188 | 1,830,182 |
| MAG00285 | CH3_bin.6 | d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__2-12-FULL-35-15;f__2-12-FULL-35-15;g__2-12-FULL-35-15;s__ | 97.65 | 1.93 | 37.0 | 18,343 | 3,203,948 |
| MAG00286 | CH3_bin.63 | d__Bacteria;p__Nitrospirota;c__Thermodesulfovibrionia;o__Thermodesulfovibrionales;f__Dissulfurispiraceae;g__;s__ | 63.73 | 1.53 | 58.0 | 2,966 | 1,218,588 |
| MAG00287 | CH3_bin.64 | d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas_E;s__Pseudomonas_E sp019747075 | 91.95 | 1.48 | 62.0 | 10,334 | 3,721,417 |
| MAG00288 | CH3_bin.7 | d__Bacteria;p__Bacteroidota_A;c__UBA10030;o__UBA10030;f__UBA10030;g__UBA9647;s__ | 64.87 | 2.88 | 54.0 | 4,148 | 2,153,408 |
| MAG00289 | CH3_bin.9 | d__Bacteria;p__Chloroflexota;c__Anaerolineae;o__Anaerolineales;f__Villigracilaceae;g__Defluviilinea;s__ | 73.9 | 2.71 | 51.0 | 9,004 | 2,689,065 |
| ID | Name | Taxonomy | Completeness | Contamination | GC | N50 | Size |