GWM
Global Wetland Microbiome Database
Overview
| ID | SMP0019 |
|---|---|
| Name | DPH1 |
| Type | lake |
| Habitat | sediment |
| Country | China |
| Latitude and longitude | 35.986667 N 116.258056 E |
| Altitude (m) | 30.7 |
| Instrument | illumina NovaSeq X Plus |
| AvgSpotLen (bp) | 300 |
| LibraryLayout | PAIRED |
| Project | PRJNA1430164 |
| Collection Date | 2025-04-11 |
| Physicochemical properties | |
| TN (g/kg) | 2.2353 |
| TP (g/kg) | 0.5775 |
| TS (g/kg) | 2.9799 |
| TC (g/kg) | 41.3860 |
| Fe (mg/kg) | 31098.1536 |
| Mn (mg/kg) | 602.4660 |
| C/N | |
| IC (g/kg) | |
| MBC (g/kg) | 0.4188 |
| pH | 6.9700 |
| Water content (%) | 0.6122 |
| NO3- (mg/kg) | 6.7947 |
| NH4+ (mg/kg) | 1.6350 |
Location
Community profile
The microbial community profiled by MetaPhlAn4
MAGs31
The MAGs in SMP0019
| ID | Name | Taxonomy | Completeness | Contamination | GC | N50 | Size |
|---|---|---|---|---|---|---|---|
| MAG00664 | DPH1_bin.1 | d__Archaea;p__Micrarchaeota;c__Micrarchaeia;o__Anstonellales;f__Bilamarchaeaceae;g__Bilamarchaeum;s__ | 92.56 | 2.24 | 57.0 | 20,201 | 1,527,510 |
| MAG00665 | DPH1_bin.10 | d__Bacteria;p__Nitrospirota;c__UBA9217;o__UBA9217;f__UBA9217;g__JAAXXJ01;s__ | 79.11 | 5.77 | 60.0 | 5,182 | 2,135,364 |
| MAG00666 | DPH1_bin.11 | d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Burkholderiales;f__Methylophilaceae;g__Methylotenera;s__ | 71.84 | 2.72 | 46.0 | 4,965 | 1,458,921 |
| MAG00667 | DPH1_bin.12 | d__Archaea;p__Thermoplasmatota;c__E2;o__DHVEG-1;f__DHVEG-1;g__SM1-50;s__ | 79.24 | 0.59 | 38.0 | 12,258 | 1,373,253 |
| MAG00668 | DPH1_bin.13 | d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__SG8-11;f__SG8-11;g__UBA6921;s__ | 96.26 | 2.08 | 59.0 | 14,960 | 2,977,508 |
| MAG00669 | DPH1_bin.14 | d__Bacteria;p__Desulfobacterota;c__GWC2-55-46;o__GWC2-55-46;f__GWC2-55-46;g__GWA2-54-12;s__ | 75.34 | 3.83 | 56.0 | 4,477 | 1,583,154 |
| MAG00670 | DPH1_bin.15 | d__Bacteria;p__Myxococcota;c__Polyangia;o__Haliangiales;f__Haliangiaceae;g__JABFXX01;s__ | 85.45 | 5.52 | 70.0 | 11,070 | 6,710,802 |
| MAG00671 | DPH1_bin.16 | d__Bacteria;p__Omnitrophota;c__Koll11;o__Velamenicoccales;f__JABMQK01;g__;s__ | 73.1 | 0.71 | 42.0 | 5,268 | 1,072,440 |
| MAG00672 | DPH1_bin.17 | d__Archaea;p__Asgardarchaeota;c__Thorarchaeia;o__Thorarchaeales;f__Thorarchaeaceae;g__JAWAQK01;s__ | 81.64 | 3.74 | 53.0 | 4,316 | 2,123,030 |
| MAG00673 | DPH1_bin.19 | d__Archaea;p__Thermoplasmatota;c__Thermoplasmata;o__UBA10834;f__UBA10834;g__COMBO-56-21;s__ | 82.78 | 1.19 | 58.0 | 13,907 | 1,651,734 |
| MAG00674 | DPH1_bin.2 | d__Bacteria;p__Desulfobacterota_E;c__Deferrimicrobia;o__Deferrimicrobiales;f__Deferrimicrobiaceae;g__JAGGAJ01;s__ | 62.05 | 0.84 | 70.0 | 3,757 | 1,270,825 |
| MAG00675 | DPH1_bin.20 | d__Bacteria;p__Nitrospirota;c__Thermodesulfovibrionia;o__Thermodesulfovibrionales;f__SM23-35;g__JALHSV01;s__ | 86.43 | 7.2 | 48.0 | 11,400 | 1,522,964 |
| MAG00676 | DPH1_bin.21 | d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Burkholderiales;f__UBA6910;g__UBA6910;s__ | 86.86 | 2.54 | 68.0 | 7,352 | 2,683,049 |
| MAG00677 | DPH1_bin.24 | d__Bacteria;p__Calditrichota;c__Calditrichia;o__RBG-13-44-9;f__RBG-13-44-9;g__RQOF01;s__ | 93.75 | 3.49 | 45.0 | 4,783 | 4,147,809 |
| MAG00678 | DPH1_bin.25 | d__Bacteria;p__Desulfobacterota;c__Desulfobacteria;o__Desulfobacterales;f__SURF-7;g__JAQYVL01;s__ | 89.74 | 6.8 | 45.0 | 4,373 | 3,109,970 |
| MAG00679 | DPH1_bin.26 | d__Archaea;p__Thermoplasmatota;c__E2;o__DHVEG-1;f__DHVEG-1;g__SM1-50;s__ | 64.69 | 0.99 | 45.0 | 33,877 | 1,204,771 |
| MAG00680 | DPH1_bin.27 | d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__CADEEN01;s__ | 85.13 | 5.13 | 68.0 | 4,137 | 3,138,430 |
| MAG00681 | DPH1_bin.28 | d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Burkholderiales;f__Nitrosomonadaceae;g__Nitrosomonas;s__ | 83.41 | 1.14 | 45.0 | 14,113 | 2,228,672 |
| MAG00682 | DPH1_bin.30 | d__Bacteria;p__Desulfobacterota;c__Syntrophobacteria;o__Syntrophobacterales;f__;g__;s__ | 83.74 | 4.23 | 56.0 | 7,773 | 3,300,363 |
| MAG00683 | DPH1_bin.32 | d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__Gemmatimonadales;f__GWC2-71-9;g__JAOTWJ01;s__ | 89.75 | 7.49 | 71.0 | 4,036 | 3,091,355 |
| MAG00684 | DPH1_bin.34 | d__Bacteria;p__Desulfobacterota;c__DSWW01;o__DSWW01;f__DSWW01;g__S015-6;s__ | 90.23 | 2.29 | 60.0 | 13,433 | 4,517,618 |
| MAG00685 | DPH1_bin.35 | d__Bacteria;p__Bacteroidota_A;c__UBA10030;o__UBA10030;f__UBA6906;g__UBA11986;s__ | 66.36 | 0.35 | 52.0 | 3,946 | 2,090,527 |
| MAG00686 | DPH1_bin.39 | d__Bacteria;p__Nitrospirota;c__Thermodesulfovibrionia;o__Thermodesulfovibrionales;f__SM23-35;g__JALHSV01;s__ | 70.6 | 2.3 | 49.0 | 6,922 | 1,275,866 |
| MAG00687 | DPH1_bin.4 | d__Bacteria;p__Bacteroidota_A;c__UBA10030;o__UBA10030;f__SZUA-254;g__;s__ | 82.01 | 3.12 | 48.0 | 3,432 | 1,997,213 |
| MAG00688 | DPH1_bin.41 | d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Chromatiales;f__Chromatiaceae;g__M0108;s__M0108 sp006227775 | 86.99 | 1.54 | 65.0 | 6,320 | 2,936,350 |
| MAG00689 | DPH1_bin.42 | d__Bacteria;p__Desulfobacterota;c__SM23-61;o__SM23-61;f__;g__;s__ | 81.23 | 5.24 | 58.0 | 4,358 | 3,187,419 |
| MAG00690 | DPH1_bin.5 | d__Archaea;p__Thermoplasmatota;c__E2;o__DHVEG-1;f__DHVEG-1;g__SM1-50;s__ | 84.97 | 1.36 | 44.0 | 49,040 | 1,947,407 |
| MAG00691 | DPH1_bin.6 | d__Bacteria;p__Nitrospirota;c__Nitrospiria;o__Nitrospirales;f__Nitrospiraceae;g__Nitrospira_D;s__ | 70.91 | 2.0 | 58.0 | 8,451 | 2,320,895 |
| MAG00692 | DPH1_bin.7 | d__Archaea;p__Thermoplasmatota;c__DTKX01;o__DTKX01;f__GCA-020343715;g__;s__ | 83.2 | 0.39 | 69.0 | 6,772 | 2,720,684 |
| MAG00693 | DPH1_bin.8 | d__Bacteria;p__Myxococcota;c__Polyangia;o__Polyangiales;f__Polyangiaceae;g__JADJKB01;s__ | 84.01 | 3.08 | 70.0 | 9,864 | 7,764,382 |
| MAG00694 | DPH1_bin.9 | d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Burkholderiales;f__Casimicrobiaceae;g__CAIWHR01;s__ | 73.05 | 3.66 | 69.0 | 10,366 | 2,762,973 |
| ID | Name | Taxonomy | Completeness | Contamination | GC | N50 | Size |