GWM
Global Wetland Microbiome Database
Overview
| ID | SMP0021 |
|---|---|
| Name | DPH3 |
| Type | lake |
| Habitat | sediment |
| Country | China |
| Latitude and longitude | 35.986667 N 116.258056 E |
| Altitude (m) | 30.7 |
| Instrument | illumina NovaSeq X Plus |
| AvgSpotLen (bp) | 300 |
| LibraryLayout | PAIRED |
| Project | PRJNA1430164 |
| Collection Date | 2025-04-11 |
| Physicochemical properties | |
| TN (g/kg) | 3.6277 |
| TP (g/kg) | 0.7448 |
| TS (g/kg) | 6.4355 |
| TC (g/kg) | 54.7180 |
| Fe (mg/kg) | 36543.6286 |
| Mn (mg/kg) | 664.8045 |
| C/N | |
| IC (g/kg) | |
| MBC (g/kg) | 0.5089 |
| pH | 6.8500 |
| Water content (%) | 0.7385 |
| NO3- (mg/kg) | 4.1167 |
| NH4+ (mg/kg) | 1.4029 |
Location
Community profile
The microbial community profiled by MetaPhlAn4
MAGs10
The MAGs in SMP0021
| ID | Name | Taxonomy | Completeness | Contamination | GC | N50 | Size |
|---|---|---|---|---|---|---|---|
| MAG00708 | DPH3_bin.1 | d__Archaea;p__Thermoplasmatota;c__DTKX01;o__DTKX01;f__GCA-020343715;g__;s__ | 66.29 | 0.12 | 69.0 | 3,070 | 1,955,978 |
| MAG00709 | DPH3_bin.11 | d__Archaea;p__Thermoproteota;c__Methanomethylicia;o__Methanomethylicales;f__Methanomethylicaceae;g__JACTUC01;s__ | 72.06 | 1.33 | 56.0 | 5,658 | 1,103,888 |
| MAG00710 | DPH3_bin.12 | d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Flavobacteriaceae;g__Lutimonas;s__ | 85.22 | 2.1 | 41.0 | 3,640 | 2,043,518 |
| MAG00711 | DPH3_bin.14 | d__Bacteria;p__Desulfobacterota_E;c__Deferrimicrobia;o__Deferrimicrobiales;f__Deferrimicrobiaceae;g__JAGGAJ01;s__ | 64.09 | 0.21 | 69.0 | 3,024 | 1,279,679 |
| MAG00712 | DPH3_bin.15 | d__Bacteria;p__Desulfobacterota;c__DSWW01;o__DSWW01;f__DSWW01;g__S015-6;s__ | 80.56 | 4.09 | 60.0 | 4,876 | 3,647,009 |
| MAG00713 | DPH3_bin.17 | d__Bacteria;p__Desulfobacterota;c__Syntrophobacteria;o__Syntrophobacterales;f__;g__;s__ | 83.66 | 3.09 | 57.0 | 6,563 | 3,069,725 |
| MAG00714 | DPH3_bin.21 | d__Archaea;p__Thermoplasmatota;c__E2;o__DHVEG-1;f__DHVEG-1;g__SM1-50;s__ | 94.01 | 2.56 | 44.0 | 27,385 | 2,108,880 |
| MAG00715 | DPH3_bin.5 | d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Burkholderiales;f__Nitrosomonadaceae;g__Nitrosomonas;s__ | 84.66 | 0.21 | 45.0 | 14,818 | 2,235,020 |
| MAG00716 | DPH3_bin.7 | d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__SG8-11;f__SG8-11;g__UBA6921;s__ | 87.82 | 3.55 | 60.0 | 6,363 | 2,593,925 |
| MAG00717 | DPH3_bin.9 | d__Bacteria;p__Nitrospirota;c__Thermodesulfovibrionia;o__Thermodesulfovibrionales;f__SM23-35;g__JALHSV01;s__ | 74.33 | 3.4 | 49.0 | 4,981 | 1,475,899 |
| ID | Name | Taxonomy | Completeness | Contamination | GC | N50 | Size |