GWM
Global Wetland Microbiome Database
Overview
| ID | SMP0022 |
|---|---|
| Name | DTH1 |
| Type | lake |
| Habitat | sediment |
| Country | China |
| Latitude and longitude | 29.346389 N 113.096944 E |
| Altitude (m) | 36.0 |
| Instrument | illumina NovaSeq X Plus |
| AvgSpotLen (bp) | 300 |
| LibraryLayout | PAIRED |
| Project | PRJNA1430164 |
| Collection Date | |
| Physicochemical properties | |
| TN (g/kg) | 3.3726 |
| TP (g/kg) | 2.1164 |
| TS (g/kg) | 0.5700 |
| TC (g/kg) | 27.5800 |
| Fe (mg/kg) | 41946.7213 |
| Mn (mg/kg) | 1209.0164 |
| C/N | 8.1778 |
| IC (g/kg) | 2.3202 |
| MBC (g/kg) | 3.8652 |
| pH | 7.3800 |
| Water content (%) | 0.7488 |
| NO3- (mg/kg) | -1.2905 |
| NH4+ (mg/kg) | 31.9638 |
Location
Community profile
The microbial community profiled by MetaPhlAn4
MAGs38
The MAGs in SMP0022
| ID | Name | Taxonomy | Completeness | Contamination | GC | N50 | Size |
|---|---|---|---|---|---|---|---|
| MAG00718 | DTH1_bin.1 | d__Archaea;p__Thermoplasmatota;c__Thermoplasmata;o__UBA10834;f__UBA10834;g__JAJYIS01;s__ | 89.36 | 4.61 | 57.0 | 27,270 | 1,683,108 |
| MAG00719 | DTH1_bin.10 | d__Bacteria;p__Verrucomicrobiota;c__Lentisphaeria;o__Victivallales;f__GWF2-50-93;g__CAIQLG01;s__ | 70.1 | 0.91 | 55.0 | 2,204 | 1,981,663 |
| MAG00720 | DTH1_bin.12 | d__Bacteria;p__Desulfobacterota;c__WTBG01;o__JAPLJA01;f__JAPLJA01;g__JAPLJA01;s__ | 78.92 | 0.87 | 48.0 | 12,109 | 2,431,855 |
| MAG00721 | DTH1_bin.13 | d__Bacteria;p__Bacteroidota_A;c__UBA10030;o__UBA10030;f__UBA10030;g__JACPLA01;s__ | 94.29 | 1.87 | 52.0 | 19,846 | 3,010,856 |
| MAG00722 | DTH1_bin.15 | d__Archaea;p__Thermoproteota;c__Bathyarchaeia;o__40CM-2-53-6;f__RBG-13-38-9;g__JAPKYM01;s__ | 90.77 | 1.1 | 47.0 | 13,920 | 1,742,412 |
| MAG00723 | DTH1_bin.17 | d__Bacteria;p__Nitrospirota;c__Thermodesulfovibrionia;o__Thermodesulfovibrionales;f__;g__;s__ | 96.7 | 0.66 | 58.0 | 13,235 | 2,385,781 |
| MAG00724 | DTH1_bin.18 | d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Aquabacterium;s__ | 83.38 | 3.23 | 62.0 | 5,472 | 3,829,146 |
| MAG00725 | DTH1_bin.19 | d__Bacteria;p__Omnitrophota;c__Koll11;o__Aquiviventales;f__Aquiviventaceae;g__JACQRB01;s__ | 63.22 | 1.15 | 47.0 | 4,131 | 1,069,580 |
| MAG00726 | DTH1_bin.2 | d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Pseudomonadales;f__UBA7239;g__JANQLY01;s__ | 79.42 | 3.72 | 49.0 | 8,778 | 2,148,444 |
| MAG00727 | DTH1_bin.20 | d__Archaea;p__Nanobdellota;c__Nanobdellia;o__UBA10117;f__UBA10117;g__DATEUM01;s__ | 67.39 | 0.49 | 40.0 | 4,152 | 352,123 |
| MAG00728 | DTH1_bin.22 | d__Archaea;p__Thermoplasmatota;c__Thermoplasmata;o__Methanomassiliicoccales;f__UBA472;g__JAJRAN01;s__ | 83.25 | 2.39 | 58.0 | 5,910 | 1,526,369 |
| MAG00729 | DTH1_bin.24 | d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Burkholderiales;f__Nitrosomonadaceae;g__VFJL01;s__ | 83.06 | 2.6 | 54.0 | 16,233 | 1,923,616 |
| MAG00730 | DTH1_bin.28 | d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Xanthomonadales;f__SZUA-36;g__SZUA-36;s__SZUA-36 sp041306925 | 60.27 | 0.59 | 58.0 | 5,272 | 2,165,309 |
| MAG00731 | DTH1_bin.29 | d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__2-12-FULL-35-15;f__2-12-FULL-35-15;g__2-12-FULL-35-15;s__ | 71.85 | 1.26 | 36.0 | 14,415 | 2,435,682 |
| MAG00732 | DTH1_bin.3 | d__Bacteria;p__Bacteroidota_A;c__UBA10030;o__UBA10030;f__UBA6906;g__;s__ | 80.3 | 2.26 | 62.0 | 9,120 | 3,440,405 |
| MAG00733 | DTH1_bin.30 | d__Archaea;p__Thermoplasmatota;c__EX4484-6;o__EX4484-6;f__EX4484-6;g__;s__ | 93.04 | 0.12 | 56.0 | 34,289 | 2,490,282 |
| MAG00734 | DTH1_bin.32 | d__Bacteria;p__Planctomycetota;c__Phycisphaerae;o__Sedimentisphaerales;f__Anaerohalosphaeraceae;g__UBA7708;s__ | 79.66 | 3.6 | 50.0 | 6,258 | 2,239,158 |
| MAG00735 | DTH1_bin.34 | d__Bacteria;p__Nitrospirota;c__Thermodesulfovibrionia;o__Thermodesulfovibrionales;f__SM23-35;g__JALHSV01;s__ | 84.48 | 0.0 | 49.0 | 20,183 | 1,391,315 |
| MAG00736 | DTH1_bin.38 | d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Vicingaceae;g__Vicingus;s__ | 62.06 | 0.91 | 32.0 | 3,128 | 1,394,695 |
| MAG00737 | DTH1_bin.39 | d__Bacteria;p__Omnitrophota;c__Koll11;o__Gygaellales;f__Profunditerraquicolaceae;g__;s__ | 63.27 | 1.91 | 43.0 | 3,809 | 844,947 |
| MAG00738 | DTH1_bin.43 | d__Bacteria;p__Desulfobacterota;c__WTBG01;o__WTBG01;f__WTBG01;g__CALJBY01;s__ | 58.39 | 1.34 | 53.0 | 3,661 | 1,716,622 |
| MAG00739 | DTH1_bin.44 | d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Crocinitomicaceae;g__JADJGJ01;s__ | 82.24 | 0.73 | 36.0 | 8,654 | 3,057,443 |
| MAG00740 | DTH1_bin.45 | d__Bacteria;p__Patescibacteriota;c__Minisyncoccia;o__GWC2-36-17;f__;g__;s__ | 81.47 | 2.43 | 44.0 | 3,592 | 637,577 |
| MAG00741 | DTH1_bin.46 | d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__B-17B0;f__B-17BO;g__Aurantibacillus;s__ | 54.61 | 0.51 | 35.0 | 4,218 | 1,641,532 |
| MAG00742 | DTH1_bin.47 | d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Pseudomonadales;f__Moraxellaceae;g__Aquirhabdus;s__ | 99.95 | 0.07 | 44.0 | 25,570 | 3,011,295 |
| MAG00743 | DTH1_bin.49 | d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__JAKOQB01;s__ | 93.54 | 3.88 | 64.0 | 30,913 | 4,078,873 |
| MAG00744 | DTH1_bin.5 | d__Bacteria;p__Verrucomicrobiota;c__Verrucomicrobiia;o__Limisphaerales;f__UBA11358;g__WYBW01;s__ | 76.06 | 2.64 | 60.0 | 5,808 | 4,743,668 |
| MAG00745 | DTH1_bin.51 | d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Burkholderiales;f__Nitrosomonadaceae;g__Nitrosomonas;s__Nitrosomonas sp005779435 | 69.75 | 2.8 | 51.0 | 4,740 | 1,576,913 |
| MAG00746 | DTH1_bin.52 | d__Bacteria;p__Desulfobacterota;c__Syntrophia;o__Syntrophales;f__Fen-1087;g__JAPLJM01;s__ | 86.6 | 2.06 | 52.0 | 7,550 | 1,768,122 |
| MAG00747 | DTH1_bin.54 | d__Bacteria;p__Chloroflexota;c__Dehalococcoidia;o__Dehalococcoidales;f__JAFGLR01;g__JAFGLR01;s__ | 75.07 | 3.51 | 50.0 | 3,312 | 1,315,716 |
| MAG00748 | DTH1_bin.57 | d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__B-17B0;f__B-17BO;g__JAHEYG01;s__ | 100.0 | 2.04 | 37.0 | 24,159 | 3,334,525 |
| MAG00749 | DTH1_bin.58 | d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Pseudomonadales;f__Moraxellaceae;g__UBA2031;s__UBA2031 sp003543245 | 97.43 | 0.81 | 58.0 | 23,858 | 2,769,232 |
| MAG00750 | DTH1_bin.59 | d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Palsa-948;f__Palsa-948;g__Palsa-948;s__ | 100.0 | 0.62 | 48.0 | 17,629 | 3,134,802 |
| MAG00751 | DTH1_bin.60 | d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Pseudomonadales;f__Moraxellaceae;g__Agitococcus;s__ | 58.84 | 0.96 | 43.0 | 6,177 | 2,120,686 |
| MAG00752 | DTH1_bin.62 | d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__JAGOPY01;g__;s__ | 89.86 | 5.14 | 48.0 | 7,710 | 3,449,486 |
| MAG00753 | DTH1_bin.7 | d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Burkholderiales;f__UBA6910;g__UBA6910;s__ | 82.5 | 3.93 | 69.0 | 4,595 | 2,612,090 |
| MAG00754 | DTH1_bin.8 | d__Archaea;p__Altiarchaeota;c__Altiarchaeia;o__IMC4;f__QMZM01;g__;s__ | 87.7 | 0.0 | 53.0 | 9,646 | 1,112,542 |
| MAG00755 | DTH1_bin.9 | d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Palsa-948;f__Palsa-948;g__Palsa-948;s__ | 87.64 | 4.11 | 42.0 | 5,644 | 2,521,950 |
| ID | Name | Taxonomy | Completeness | Contamination | GC | N50 | Size |