GWM
Global Wetland Microbiome Database
Overview
| ID | SMP0023 |
|---|---|
| Name | DTH2 |
| Type | lake |
| Habitat | sediment |
| Country | China |
| Latitude and longitude | 29.346389 N 113.096944 E |
| Altitude (m) | 36.0 |
| Instrument | illumina NovaSeq X Plus |
| AvgSpotLen (bp) | 300 |
| LibraryLayout | PAIRED |
| Project | PRJNA1430164 |
| Collection Date | |
| Physicochemical properties | |
| TN (g/kg) | 3.3701 |
| TP (g/kg) | 2.1484 |
| TS (g/kg) | 0.6294 |
| TC (g/kg) | 28.2900 |
| Fe (mg/kg) | 36792.0998 |
| Mn (mg/kg) | 1627.8586 |
| C/N | 8.3945 |
| IC (g/kg) | 3.4715 |
| MBC (g/kg) | 4.0243 |
| pH | 7.0700 |
| Water content (%) | 0.7547 |
| NO3- (mg/kg) | -3.1620 |
| NH4+ (mg/kg) | 25.9736 |
Location
Community profile
The microbial community profiled by MetaPhlAn4
MAGs39
The MAGs in SMP0023
| ID | Name | Taxonomy | Completeness | Contamination | GC | N50 | Size |
|---|---|---|---|---|---|---|---|
| MAG00756 | DTH2_bin.10 | d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__JAKOQB01;s__ | 95.7 | 4.69 | 64.0 | 49,216 | 4,386,131 |
| MAG00757 | DTH2_bin.11 | d__Bacteria;p__Omnitrophota;c__Koll11;o__Gygaellales;f__Profunditerraquicolaceae;g__;s__ | 79.27 | 0.82 | 43.0 | 4,687 | 894,251 |
| MAG00758 | DTH2_bin.14 | d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Palsa-948;f__Palsa-948;g__Palsa-948;s__ | 96.12 | 0.87 | 48.0 | 13,306 | 3,152,603 |
| MAG00759 | DTH2_bin.15 | d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Crocinitomicaceae;g__JADJGJ01;s__ | 100.0 | 2.55 | 36.0 | 10,609 | 3,559,769 |
| MAG00760 | DTH2_bin.18 | d__Bacteria;p__Desulfobacterota;c__Syntrophia;o__Syntrophales;f__Fen-1087;g__JAPLJM01;s__ | 66.32 | 2.74 | 52.0 | 7,165 | 1,567,121 |
| MAG00761 | DTH2_bin.19 | d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Burkholderiales;f__Nitrosomonadaceae;g__Nitrosomonas;s__Nitrosomonas sp005779435 | 66.29 | 1.47 | 52.0 | 3,466 | 1,310,669 |
| MAG00762 | DTH2_bin.2 | d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Burkholderiales;f__Methylophilaceae;g__DAOMFG01;s__ | 78.2 | 5.2 | 58.0 | 10,895 | 1,625,482 |
| MAG00763 | DTH2_bin.20 | d__Bacteria;p__Desulfobacterota;c__Desulfuromonadia;o__Desulfuromonadales;f__BM103;g__VAUL01;s__ | 60.7 | 0.74 | 64.0 | 3,377 | 1,190,454 |
| MAG00764 | DTH2_bin.21 | d__Archaea;p__Thermoplasmatota;c__Thermoplasmata;o__UBA10834;f__UBA10834;g__JAJYIS01;s__ | 98.06 | 1.5 | 57.0 | 33,932 | 1,696,185 |
| MAG00765 | DTH2_bin.22 | d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Burkholderiales;f__Rhodocyclaceae;g__Sulfuritalea;s__ | 95.36 | 1.69 | 64.0 | 13,607 | 3,157,731 |
| MAG00766 | DTH2_bin.24 | d__Archaea;p__Thermoplasmatota;c__EX4484-6;o__EX4484-6;f__EX4484-6;g__;s__ | 88.72 | 0.06 | 56.0 | 20,839 | 2,416,545 |
| MAG00767 | DTH2_bin.25 | d__Bacteria;p__Nitrospirota;c__Thermodesulfovibrionia;o__SZUA-242;f__SZUA-242;g__;s__ | 72.44 | 1.82 | 61.0 | 4,334 | 1,916,897 |
| MAG00768 | DTH2_bin.27 | d__Bacteria;p__Desulfobacterota;c__BSN033;o__BSN033;f__UBA1163;g__UBA1163;s__ | 93.78 | 7.73 | 45.0 | 11,621 | 3,134,863 |
| MAG00769 | DTH2_bin.30 | d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Pseudomonadales;f__Moraxellaceae;g__UBA2031;s__UBA2031 sp003543245 | 93.2 | 1.55 | 58.0 | 24,277 | 2,687,944 |
| MAG00770 | DTH2_bin.31 | d__Bacteria;p__Bacteroidota_A;c__UBA10030;o__UBA10030;f__UBA10030;g__JACPLA01;s__ | 94.55 | 0.43 | 52.0 | 18,983 | 2,998,766 |
| MAG00771 | DTH2_bin.32 | d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__Gemmatimonadales;f__GWC2-71-9;g__SZUA-544;s__ | 60.84 | 0.69 | 70.0 | 6,245 | 1,613,424 |
| MAG00772 | DTH2_bin.33 | d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__B-17B0;f__B-17BO;g__JAHEYG01;s__ | 99.31 | 1.36 | 37.0 | 25,390 | 3,320,607 |
| MAG00773 | DTH2_bin.34 | d__Archaea;p__Altiarchaeota;c__Altiarchaeia;o__IMC4;f__QMZM01;g__;s__ | 93.11 | 0.12 | 53.0 | 10,789 | 1,112,660 |
| MAG00774 | DTH2_bin.39 | d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Aquabacterium;s__ | 92.16 | 4.48 | 62.0 | 9,024 | 4,079,036 |
| MAG00775 | DTH2_bin.40 | d__Archaea;p__Thermoplasmatota;c__Thermoplasmata;o__Methanomassiliicoccales;f__UBA472;g__JAJRAN01;s__ | 83.87 | 2.6 | 58.0 | 5,729 | 1,580,580 |
| MAG00776 | DTH2_bin.41 | d__Bacteria;p__Planctomycetota;c__Phycisphaerae;o__Sedimentisphaerales;f__Anaerohalosphaeraceae;g__UBA7708;s__ | 78.69 | 3.19 | 49.0 | 6,939 | 2,192,837 |
| MAG00777 | DTH2_bin.43 | d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Xanthomonadales;f__SZUA-36;g__SZUA-36;s__SZUA-36 sp041306925 | 62.35 | 0.52 | 58.0 | 5,475 | 2,075,019 |
| MAG00778 | DTH2_bin.44 | d__Bacteria;p__Myxococcota;c__Myxococcia;o__Myxococcales;f__Anaeromyxobacteraceae;g__;s__ | 66.9 | 3.05 | 72.0 | 3,801 | 2,312,108 |
| MAG00779 | DTH2_bin.48 | d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__2-12-FULL-35-15;f__2-12-FULL-35-15;g__2-12-FULL-35-15;s__ | 97.06 | 2.9 | 37.0 | 13,190 | 3,188,475 |
| MAG00780 | DTH2_bin.49 | d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Burkholderiales;f__SG8-39;g__2-02-FULL-66-14;s__ | 70.06 | 3.9 | 69.0 | 5,712 | 2,184,900 |
| MAG00781 | DTH2_bin.51 | d__Archaea;p__Thermoproteota;c__Bathyarchaeia;o__40CM-2-53-6;f__RBG-13-38-9;g__JAPKYM01;s__ | 88.4 | 3.14 | 47.0 | 11,435 | 1,657,596 |
| MAG00782 | DTH2_bin.55 | d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Pseudomonadales;f__UBA7239;g__JANQLY01;s__ | 95.68 | 3.52 | 49.0 | 14,923 | 2,499,007 |
| MAG00783 | DTH2_bin.56 | d__Archaea;p__Halobacteriota;c__Methanomicrobia;o__Methanomicrobiales;f__JACTUA01;g__JACTUA01;s__ | 65.94 | 0.19 | 66.0 | 3,143 | 793,937 |
| MAG00784 | DTH2_bin.57 | d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Palsa-948;f__Palsa-948;g__Palsa-948;s__ | 72.37 | 0.44 | 42.0 | 7,579 | 1,903,227 |
| MAG00785 | DTH2_bin.6 | d__Bacteria;p__Bacteroidota_A;c__Kapaibacteriia;o__Kapaibacteriales;f__Kapaibacteriaceae;g__ZLKRG46;s__ | 52.03 | 0.16 | 58.0 | 2,275 | 1,688,343 |
| MAG00786 | DTH2_bin.61 | d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Burkholderiales;f__Nitrosomonadaceae;g__VFJL01;s__ | 96.47 | 0.69 | 55.0 | 14,825 | 1,809,017 |
| MAG00787 | DTH2_bin.66 | d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__B-17B0;f__B-17BO;g__Aurantibacillus;s__ | 82.06 | 2.9 | 36.0 | 7,043 | 2,727,549 |
| MAG00788 | DTH2_bin.67 | d__Bacteria;p__Verrucomicrobiota;c__Verrucomicrobiia;o__Limisphaerales;f__UBA11358;g__WYBW01;s__ | 73.58 | 3.19 | 60.0 | 5,921 | 4,831,795 |
| MAG00789 | DTH2_bin.68 | d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__JAGOPY01;g__;s__ | 84.14 | 3.2 | 48.0 | 5,742 | 3,325,322 |
| MAG00790 | DTH2_bin.69 | d__Bacteria;p__Desulfobacterota;c__WTBG01;o__JAPLJA01;f__JAPLJA01;g__JAPLJA01;s__ | 96.24 | 5.9 | 47.0 | 9,349 | 3,570,542 |
| MAG00791 | DTH2_bin.71 | d__Bacteria;p__Nitrospirota;c__Thermodesulfovibrionia;o__Thermodesulfovibrionales;f__SM23-35;g__JALHSV01;s__ | 84.27 | 2.81 | 48.0 | 14,012 | 1,568,930 |
| MAG00792 | DTH2_bin.72 | d__Bacteria;p__Nitrospirota;c__Thermodesulfovibrionia;o__Thermodesulfovibrionales;f__;g__;s__ | 95.07 | 0.73 | 58.0 | 15,249 | 2,243,147 |
| MAG00793 | DTH2_bin.8 | d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Burkholderiales;f__UBA6910;g__UBA6910;s__ | 89.51 | 3.82 | 70.0 | 7,764 | 2,829,633 |
| MAG00794 | DTH2_bin.9 | d__Bacteria;p__Patescibacteriota;c__Minisyncoccia;o__UBA9973;f__UBA3531;g__;s__ | 79.12 | 0.06 | 42.0 | 7,268 | 520,988 |
| ID | Name | Taxonomy | Completeness | Contamination | GC | N50 | Size |