GWM
Global Wetland Microbiome Database
Overview
| ID | SMP0024 |
|---|---|
| Name | DTH3 |
| Type | lake |
| Habitat | sediment |
| Country | China |
| Latitude and longitude | 29.346389 N 113.096944 E |
| Altitude (m) | 36.0 |
| Instrument | illumina NovaSeq X Plus |
| AvgSpotLen (bp) | 300 |
| LibraryLayout | PAIRED |
| Project | PRJNA1430164 |
| Collection Date | |
| Physicochemical properties | |
| TN (g/kg) | 3.2295 |
| TP (g/kg) | 2.1115 |
| TS (g/kg) | 0.5487 |
| TC (g/kg) | 29.6200 |
| Fe (mg/kg) | 41768.6275 |
| Mn (mg/kg) | 1599.0196 |
| C/N | 9.1716 |
| IC (g/kg) | 3.6570 |
| MBC (g/kg) | 4.0695 |
| pH | 6.7300 |
| Water content (%) | 0.7592 |
| NO3- (mg/kg) | -2.1700 |
| NH4+ (mg/kg) | 41.3510 |
Location
Community profile
The microbial community profiled by MetaPhlAn4
MAGs39
The MAGs in SMP0024
| ID | Name | Taxonomy | Completeness | Contamination | GC | N50 | Size |
|---|---|---|---|---|---|---|---|
| MAG00795 | DTH3_bin.1 | d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Burkholderiales;f__UBA6910;g__UBA6910;s__ | 89.76 | 6.12 | 70.0 | 5,467 | 3,154,793 |
| MAG00796 | DTH3_bin.11 | d__Bacteria;p__Desulfobacterota;c__Desulfuromonadia;o__Desulfuromonadales;f__BM103;g__VAUL01;s__ | 73.96 | 2.72 | 64.0 | 3,475 | 1,418,883 |
| MAG00797 | DTH3_bin.14 | d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__Gemmatimonadales;f__GWC2-71-9;g__SZUA-544;s__ | 61.94 | 1.19 | 70.0 | 5,111 | 1,649,647 |
| MAG00798 | DTH3_bin.16 | d__Bacteria;p__Omnitrophota;c__Koll11;o__Gygaellales;f__Profunditerraquicolaceae;g__;s__ | 57.05 | 0.14 | 43.0 | 3,648 | 677,452 |
| MAG00799 | DTH3_bin.17 | d__Bacteria;p__Verrucomicrobiota;c__Verrucomicrobiia;o__Limisphaerales;f__UBA11358;g__WYBW01;s__ | 82.75 | 2.66 | 60.0 | 5,588 | 5,235,475 |
| MAG00800 | DTH3_bin.18 | d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Burkholderiales;f__Rhodocyclaceae;g__Sulfuritalea;s__ | 92.8 | 4.53 | 64.0 | 13,261 | 3,382,470 |
| MAG00801 | DTH3_bin.19 | d__Bacteria;p__Acidobacteriota;c__Thermoanaerobaculia;o__Thermoanaerobaculales;f__Thermoanaerobaculaceae;g__;s__ | 56.96 | 1.3 | 71.0 | 3,419 | 1,433,697 |
| MAG00802 | DTH3_bin.2 | d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Palsa-948;f__Palsa-948;g__Palsa-948;s__ | 91.79 | 1.38 | 49.0 | 12,240 | 2,831,724 |
| MAG00803 | DTH3_bin.20 | d__Bacteria;p__Desulfobacterota;c__BSN033;o__BSN033;f__UBA1163;g__UBA1163;s__ | 93.64 | 4.64 | 45.0 | 11,023 | 3,135,256 |
| MAG00804 | DTH3_bin.22 | d__Bacteria;p__Nitrospirota;c__Thermodesulfovibrionia;o__Thermodesulfovibrionales;f__SM23-35;g__JALHSV01;s__ | 87.12 | 1.41 | 49.0 | 11,339 | 1,636,930 |
| MAG00805 | DTH3_bin.25 | d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__JAGOPY01;g__;s__ | 78.04 | 2.06 | 48.0 | 5,633 | 2,729,162 |
| MAG00806 | DTH3_bin.26 | d__Bacteria;p__Desulfobacterota;c__WTBG01;o__JAPLJA01;f__JAPLJA01;g__JAPLJA01;s__ | 77.58 | 0.94 | 48.0 | 10,486 | 2,275,056 |
| MAG00807 | DTH3_bin.27 | d__Archaea;p__Halobacteriota;c__Methanosarcinia;o__Methanotrichales;f__Methanotrichaceae;g__Methanothrix;s__ | 64.96 | 1.24 | 56.0 | 2,723 | 834,225 |
| MAG00808 | DTH3_bin.28 | d__Archaea;p__Altiarchaeota;c__Altiarchaeia;o__IMC4;f__QMZM01;g__;s__ | 82.24 | 0.37 | 53.0 | 10,522 | 1,103,972 |
| MAG00809 | DTH3_bin.29 | d__Bacteria;p__Omnitrophota;c__Koll11;o__Aquiviventales;f__Aquiviventaceae;g__JACPTX01;s__ | 63.87 | 2.5 | 47.0 | 4,123 | 1,096,831 |
| MAG00810 | DTH3_bin.30 | d__Bacteria;p__Acidobacteriota;c__Thermoanaerobaculia;o__UBA5066;f__UBA5066;g__;s__ | 74.82 | 1.15 | 70.0 | 9,308 | 2,857,046 |
| MAG00811 | DTH3_bin.32 | d__Bacteria;p__Bacteroidota_A;c__UBA10030;o__UBA10030;f__UBA6906;g__;s__ | 84.18 | 2.61 | 62.0 | 7,183 | 3,556,330 |
| MAG00812 | DTH3_bin.34 | d__Bacteria;p__Myxococcota;c__Myxococcia;o__Myxococcales;f__Anaeromyxobacteraceae;g__;s__ | 70.97 | 0.73 | 72.0 | 3,224 | 2,065,618 |
| MAG00813 | DTH3_bin.38 | d__Bacteria;p__Actinomycetota;c__Acidimicrobiia;o__Acidimicrobiales;f__Ilumatobacteraceae;g__F1-60-MAGs027;s__F1-60-MAGs027 sp036771295 | 52.92 | 0.38 | 65.0 | 2,535 | 989,909 |
| MAG00814 | DTH3_bin.4 | d__Bacteria;p__Nitrospirota;c__Thermodesulfovibrionia;o__Thermodesulfovibrionales;f__;g__;s__ | 98.23 | 0.17 | 58.0 | 14,517 | 2,426,563 |
| MAG00815 | DTH3_bin.41 | d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Pseudomonadales;f__Moraxellaceae;g__UBA2031;s__UBA2031 sp003543245 | 90.39 | 2.04 | 58.0 | 10,627 | 2,477,906 |
| MAG00816 | DTH3_bin.43 | d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Xanthomonadales;f__SZUA-36;g__SZUA-36;s__SZUA-36 sp041306925 | 88.26 | 2.43 | 58.0 | 4,044 | 2,919,159 |
| MAG00817 | DTH3_bin.44 | d__Bacteria;p__Bacteroidota_A;c__UBA10030;o__UBA10030;f__UBA10030;g__JACPLA01;s__ | 93.16 | 0.53 | 52.0 | 17,957 | 3,054,183 |
| MAG00818 | DTH3_bin.45 | d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Burkholderiales;f__Nitrosomonadaceae;g__VFJL01;s__ | 98.35 | 4.76 | 55.0 | 16,476 | 1,953,033 |
| MAG00819 | DTH3_bin.47 | d__Bacteria;p__Patescibacteriota;c__Patescibacteriia;o__Patescibacteriales;f__GWE2-39-37;g__JAJYMT01;s__ | 76.28 | 4.81 | 43.0 | 2,157 | 556,382 |
| MAG00820 | DTH3_bin.48 | d__Bacteria;p__Desulfobacterota;c__Syntrophia;o__Syntrophales;f__Fen-1087;g__JAPLJM01;s__ | 81.12 | 5.66 | 52.0 | 5,097 | 2,256,534 |
| MAG00821 | DTH3_bin.49 | d__Archaea;p__Nanobdellota;c__Nanobdellia;o__UBA10117;f__UBA10117;g__DATEUM01;s__ | 70.38 | 1.81 | 40.0 | 3,679 | 328,102 |
| MAG00822 | DTH3_bin.5 | d__Archaea;p__Thermoplasmatota;c__Thermoplasmata;o__UBA10834;f__UBA10834;g__JAJYIS01;s__ | 92.26 | 1.36 | 57.0 | 28,168 | 1,666,746 |
| MAG00823 | DTH3_bin.51 | d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Burkholderiales;f__Nitrosomonadaceae;g__Nitrosomonas;s__Nitrosomonas sp005779435 | 60.57 | 1.84 | 51.0 | 3,170 | 1,359,944 |
| MAG00824 | DTH3_bin.52 | d__Archaea;p__Thermoproteota;c__Bathyarchaeia;o__40CM-2-53-6;f__RBG-13-38-9;g__JAPKYM01;s__ | 93.44 | 1.09 | 47.0 | 10,166 | 1,767,578 |
| MAG00825 | DTH3_bin.54 | d__Bacteria;p__Planctomycetota;c__Phycisphaerae;o__Sedimentisphaerales;f__Anaerohalosphaeraceae;g__UBA7708;s__ | 87.45 | 2.95 | 50.0 | 6,186 | 2,178,221 |
| MAG00826 | DTH3_bin.55 | d__Archaea;p__Thermoplasmatota;c__EX4484-6;o__EX4484-6;f__EX4484-6;g__;s__ | 87.99 | 1.62 | 56.0 | 13,035 | 2,484,578 |
| MAG00827 | DTH3_bin.57 | d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Aquabacterium;s__ | 78.45 | 2.05 | 63.0 | 4,183 | 3,199,971 |
| MAG00828 | DTH3_bin.58 | d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__G020354665;s__ | 53.16 | 0.32 | 67.0 | 6,403 | 1,840,494 |
| MAG00829 | DTH3_bin.59 | d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__B-17B0;f__B-17BO;g__JAHEYG01;s__ | 100.0 | 0.92 | 37.0 | 22,602 | 3,349,224 |
| MAG00830 | DTH3_bin.6 | d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__JAKOQB01;s__ | 97.37 | 0.41 | 64.0 | 42,513 | 4,224,369 |
| MAG00831 | DTH3_bin.60 | d__Bacteria;p__Verrucomicrobiota;c__Lentisphaeria;o__Victivallales;f__GWF2-50-93;g__CAIQLG01;s__ | 60.65 | 1.68 | 55.0 | 1,830 | 2,136,304 |
| MAG00832 | DTH3_bin.8 | d__Archaea;p__Thermoplasmatota;c__Thermoplasmata;o__Methanomassiliicoccales;f__UBA472;g__JAJRAN01;s__ | 83.78 | 2.03 | 58.0 | 5,175 | 1,632,322 |
| MAG00833 | DTH3_bin.9 | d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Palsa-948;f__Palsa-948;g__Palsa-948;s__ | 79.67 | 1.33 | 42.0 | 5,942 | 2,367,556 |
| ID | Name | Taxonomy | Completeness | Contamination | GC | N50 | Size |