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Overview

ID SMP0027
Name DYD3
Type paddy
Habitat soil
Country China
Latitude and longitude 37.814167 N 119.248611 E
Altitude (m)
Instrument illumina NovaSeq X Plus
AvgSpotLen (bp) 300
LibraryLayout PAIRED
Project PRJNA1430164
Collection Date 2023-05-10
Physicochemical properties
TN (g/kg) 0.7640
TP (g/kg) 0.4700
TS (g/kg) 0.0707
TC (g/kg) 11.9500
Fe (mg/kg) 22319.7674
Mn (mg/kg) 386.0511
C/N 15.6404
IC (g/kg) 10.4110
MBC (g/kg) 0.1277
pH 8.6800
Water content (%) 0.1053
NO3- (mg/kg) 0.6114
NH4+ (mg/kg) 2.1058

Location

Community profile
The microbial community profiled by MetaPhlAn4

MAGs50
The MAGs in SMP0027

ID Name Taxonomy Completeness Contamination GCN50Size
MAG00944 DYD3_bin.1 d__Archaea;p__Thermoproteota;c__Nitrososphaeria;o__Nitrososphaerales;f__Nitrososphaeraceae;g__TA-21;s__TA-21 sp025923455 68.74 2.49 36.0 4,362 1,655,790
MAG00945 DYD3_bin.10 d__Bacteria;p__Pseudomonadota;c__Alphaproteobacteria;o__Caulobacterales;f__Maricaulaceae;g__JAJFFL01;s__ 91.23 2.25 70.0 17,949 4,172,977
MAG00946 DYD3_bin.11 d__Bacteria;p__Myxococcota;c__Polyangia;o__Polyangiales;f__Polyangiaceae;g__DASQNT01;s__ 92.84 5.76 70.0 16,837 11,492,592
MAG00947 DYD3_bin.16 d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Chitinophagales;f__Chitinophagaceae;g__Niastella;s__ 58.81 0.89 45.0 4,354 4,138,375
MAG00948 DYD3_bin.17 d__Bacteria;p__Pseudomonadota;c__Alphaproteobacteria;o__UBA11222;f__UBA11222;g__UBA11222;s__UBA11222 sp030652895 88.05 0.77 57.0 10,920 2,618,099
MAG00949 DYD3_bin.18 d__Bacteria;p__Methylomirabilota;c__Methylomirabilia;o__Methylomirabilales;f__CSP1-5;g__CSP1-5;s__ 94.24 1.77 61.0 11,858 2,449,310
MAG00950 DYD3_bin.2 d__Archaea;p__Thermoplasmatota;c__E2;o__JACPAO01;f__JACPAO01;g__;s__ 70.93 2.5 63.0 6,682 2,559,531
MAG00951 DYD3_bin.20 d__Bacteria;p__Chloroflexota;c__Anaerolineae;o__4572-78;f__J111;g__DSQQ01;s__ 69.76 3.03 55.0 3,224 6,717,541
MAG00952 DYD3_bin.21 d__Bacteria;p__Pseudomonadota;c__Alphaproteobacteria;o__Kiloniellales;f__J153;g__;s__ 89.19 1.44 64.0 25,518 4,385,751
MAG00953 DYD3_bin.22 d__Bacteria;p__Pseudomonadota;c__Alphaproteobacteria;o__Micropepsales;f__Micropepsaceae;g__SZUA-430;s__ 70.96 2.89 64.0 3,581 2,621,072
MAG00954 DYD3_bin.23 d__Bacteria;p__Myxococcota;c__Polyangia;o__Polyangiales;f__Polyangiaceae;g__PMG-095;s__ 88.91 0.94 68.0 20,617 6,276,166
MAG00955 DYD3_bin.24 d__Bacteria;p__Actinomycetota;c__AC-67;o__AC-67;f__AC-67;g__DASWHR01;s__ 93.24 2.57 67.0 22,740 3,131,648
MAG00956 DYD3_bin.26 d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Chitinophagales;f__Saprospiraceae;g__Opimibacter;s__ 59.35 1.05 44.0 5,279 1,922,474
MAG00957 DYD3_bin.29 d__Bacteria;p__Electryoneota;c__RPQS01;o__RPQS01;f__RPQS01;g__JAHIZR01;s__ 77.52 1.16 59.0 8,713 2,885,428
MAG00958 DYD3_bin.3 d__Bacteria;p__Desulfobacterota_B;c__Binatia;o__UBA9968;f__UBA9968;g__DP-20;s__ 75.87 4.96 58.0 11,212 3,264,194
MAG00959 DYD3_bin.30 d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Burkholderiales;f__SG8-39;g__JBFKUL01;s__ 57.49 1.35 67.0 21,051 1,988,152
MAG00960 DYD3_bin.32 d__Bacteria;p__Actinomycetota;c__Nitriliruptoria;o__Euzebyales;f__Egibacteraceae;g__DATMKC01;s__ 89.8 0.32 71.0 15,071 2,449,931
MAG00961 DYD3_bin.33 d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Rariloculales;f__Rariloculaceae;g__FEN-1219;s__ 80.65 1.12 68.0 13,330 4,598,407
MAG00962 DYD3_bin.34 d__Bacteria;p__Methylomirabilota;c__Methylomirabilia;o__Rokubacteriales;f__CSP1-6;g__CAMLFJ01;s__CAMLFJ01 sp035524955 80.2 5.94 71.0 6,422 3,601,067
MAG00963 DYD3_bin.36 d__Archaea;p__Thermoplasmatota;c__SW-10-69-26;o__JACQPN01;f__JAJPHT01;g__JAJPHT01;s__ 68.06 2.97 71.0 4,765 2,870,440
MAG00964 DYD3_bin.37 d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__HTCC5015;f__HTCC5015;g__DASUFE01;s__ 87.14 1.02 55.0 10,118 2,686,688
MAG00965 DYD3_bin.38 d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Burkholderiales;f__SG8-39;g__2-02-FULL-66-14;s__ 79.79 0.04 66.0 10,984 2,377,425
MAG00966 DYD3_bin.39 d__Bacteria;p__Patescibacteriota;c__Minisyncoccia;o__UBA9973;f__UBA2103;g__C7867-001;s__ 93.09 3.16 47.0 17,014 1,841,291
MAG00967 DYD3_bin.4 d__Archaea;p__Thermoplasmatota;c__E2;o__JACPAO01;f__JAHFTW01;g__JAHFTW01;s__ 68.52 0.89 67.0 9,092 1,626,794
MAG00968 DYD3_bin.40 d__Bacteria;p__Acidobacteriota;c__Thermoanaerobaculia;o__Multivoradales;f__J023;g__;s__ 100.0 3.25 67.0 12,894 8,941,833
MAG00969 DYD3_bin.44 d__Bacteria;p__Patescibacteriota;c__Saccharimonadia;o__UBA4664;f__JAHWKN01;g__;s__ 94.83 2.41 49.0 29,204 858,101
MAG00970 DYD3_bin.45 d__Bacteria;p__Nitrospirota;c__JACRHJ01;o__JACRHJ01;f__;g__;s__ 60.25 0.01 62.0 3,706 1,364,714
MAG00971 DYD3_bin.46 d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__ELB16-189;s__ 85.9 1.71 40.0 9,385 4,222,233
MAG00972 DYD3_bin.47 d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Xanthomonadales;f__SZUA-36;g__;s__ 92.93 1.71 65.0 12,940 2,699,252
MAG00973 DYD3_bin.49 d__Archaea;p__Thermoplasmatota;c__E2;o__JACPAO01;f__JACPAO01;g__JACPAO01;s__ 69.68 3.68 67.0 10,925 2,115,105
MAG00974 DYD3_bin.5 d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__HTCC5015;f__HTCC5015;g__JAFGLM01;s__ 87.7 3.22 51.0 12,845 2,934,413
MAG00975 DYD3_bin.50 d__Bacteria;p__Acidobacteriota;c__Vicinamibacteria;o__Fen-336;f__Fen-336;g__;s__ 72.05 0.57 72.0 10,302 3,525,936
MAG00976 DYD3_bin.51 d__Bacteria;p__Actinomycetota;c__Acidimicrobiia;o__Acidimicrobiales;f__CADCSY01;g__JAEKLB01;s__ 72.11 0.18 69.0 7,973 2,235,465
MAG00977 DYD3_bin.54 d__Bacteria;p__Chloroflexota;c__Limnocylindria;o__QHBO01;f__QHBO01;g__;s__ 83.98 0.79 71.0 12,312 2,108,480
MAG00978 DYD3_bin.55 d__Bacteria;p__Chloroflexota;c__Limnocylindria;o__Limnocylindrales;f__CSP1-4;g__JALYGJ01;s__ 79.23 0.92 68.0 14,956 2,048,742
MAG00979 DYD3_bin.57 d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Burkholderiales;f__SG8-41;g__SG8-41;s__ 91.41 5.11 65.0 24,449 3,658,362
MAG00980 DYD3_bin.58 d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__Gemmatimonadales;f__GWC2-71-9;g__SZUA-320;s__ 62.54 1.1 63.0 4,740 2,313,741
MAG00981 DYD3_bin.60 d__Bacteria;p__Bdellovibrionota;c__Bacteriovoracia;o__Bacteriovoracales;f__Bacteriovoracaceae;g__Peredibacter;s__ 92.64 2.44 43.0 16,639 3,823,941
MAG00982 DYD3_bin.61 d__Bacteria;p__Actinomycetota;c__Acidimicrobiia;o__UBA5794;f__ZC4RG35;g__JANQRA01;s__JANQRA01 sp035620735 78.52 1.87 63.0 5,226 2,516,280
MAG00983 DYD3_bin.62 d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__Gemmatimonadales;f__GWC2-71-9;g__SZUA-320;s__ 97.53 1.01 69.0 23,838 3,737,049
MAG00984 DYD3_bin.63 d__Bacteria;p__Acidobacteriota;c__Vicinamibacteria;o__Fen-336;f__Fen-336;g__DATFEN01;s__ 78.17 1.89 71.0 11,683 3,891,383
MAG00985 DYD3_bin.64 d__Bacteria;p__Planctomycetota;c__Planctomycetia;o__Planctomycetales;f__Planctomycetaceae;g__DATKCB01;s__ 59.52 1.43 57.0 2,605 3,889,317
MAG00986 DYD3_bin.65 d__Bacteria;p__Pseudomonadota;c__Alphaproteobacteria;o__Zavarziniales;f__Zavarziniaceae;g__Zavarzinia;s__ 76.57 0.22 67.0 8,390 4,179,977
MAG00987 DYD3_bin.66 d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Woeseiales;f__Woeseiaceae;g__JAKEGN01;s__JAKEGN01 sp035457045 80.42 4.23 61.0 5,181 2,786,287
MAG00988 DYD3_bin.68 d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__Palauibacterales;f__Palauibacteraceae;g__;s__ 69.23 1.03 74.0 3,713 1,974,131
MAG00989 DYD3_bin.69 d__Bacteria;p__Krumholzibacteriota;c__Krumholzibacteriia;o__G020349025;f__G020349025;g__;s__ 61.79 1.76 68.0 5,498 2,766,224
MAG00990 DYD3_bin.7 d__Bacteria;p__Patescibacteriota;c__Patescibacteriia;o__SG8-24;f__DYFX01;g__DYFX01;s__ 98.37 2.71 66.0 33,310 1,255,352
MAG00991 DYD3_bin.71 d__Bacteria;p__Eisenbacteria;c__RBG-16-71-46;o__SZUA-252;f__SZUA-252;g__SZUA-252;s__ 57.48 0.23 71.0 7,471 1,813,382
MAG00992 DYD3_bin.75 d__Bacteria;p__Patescibacteriota;c__Saccharimonadia;o__Saccharimonadales;f__JAGQNK01;g__JAGQNK01;s__ 88.96 2.8 52.0 12,438 811,955
MAG00993 DYD3_bin.76 d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__Gemmatimonadales;f__GWC2-71-9;g__JAICEH01;s__ 81.31 1.95 74.0 6,151 2,670,391
ID Name Taxonomy Completeness Contamination GCN50Size