GWM
Global Wetland Microbiome Database
Overview
| ID | SMP0028 |
|---|---|
| Name | EH1 |
| Type | lake |
| Habitat | sediment |
| Country | China |
| Latitude and longitude | 25.7257 N 100.223 E |
| Altitude (m) | 1992.0 |
| Instrument | illumina NovaSeq X Plus |
| AvgSpotLen (bp) | 300 |
| LibraryLayout | PAIRED |
| Project | PRJNA1430164 |
| Collection Date | |
| Physicochemical properties | |
| TN (g/kg) | 5.1909 |
| TP (g/kg) | 1.0255 |
| TS (g/kg) | 2.7404 |
| TC (g/kg) | 56.5200 |
| Fe (mg/kg) | 41950.5155 |
| Mn (mg/kg) | 1048.4536 |
| C/N | 10.8882 |
| IC (g/kg) | 10.7751 |
| MBC (g/kg) | 0.1781 |
| pH | 7.3100 |
| Water content (%) | 0.8430 |
| NO3- (mg/kg) | -3.5701 |
| NH4+ (mg/kg) | 184.9954 |
Location
Community profile
The microbial community profiled by MetaPhlAn4
MAGs41
The MAGs in SMP0028
| ID | Name | Taxonomy | Completeness | Contamination | GC | N50 | Size |
|---|---|---|---|---|---|---|---|
| MAG00994 | EH1_bin.1 | d__Bacteria;p__Desulfobacterota;c__Desulfobacteria;o__Desulfobacterales;f__SURF-7;g__JAQYVL01;s__ | 76.9 | 4.75 | 45.0 | 3,171 | 2,287,245 |
| MAG00995 | EH1_bin.10 | d__Bacteria;p__Nitrospirota;c__Thermodesulfovibrionia;o__SZUA-242;f__SZUA-242;g__SZUA-242;s__ | 90.96 | 1.26 | 61.0 | 17,885 | 2,729,035 |
| MAG00996 | EH1_bin.11 | d__Bacteria;p__Chloroflexota;c__Dehalococcoidia;o__GIF9;f__UBA5629;g__;s__ | 56.31 | 0.41 | 55.0 | 6,179 | 1,447,938 |
| MAG00997 | EH1_bin.12 | d__Bacteria;p__Acidobacteriota;c__Polarisedimenticolia;o__Polarisedimenticolales;f__DASRJG01;g__;s__ | 95.18 | 2.09 | 70.0 | 12,075 | 2,982,798 |
| MAG00998 | EH1_bin.14 | d__Bacteria;p__Desulfobacterota;c__Syntrophia;o__Syntrophales;f__UBA2185;g__UBA2185;s__ | 92.62 | 8.28 | 48.0 | 4,071 | 2,601,150 |
| MAG00999 | EH1_bin.19 | d__Bacteria;p__Nitrospirota;c__Nitrospiria;o__Nitrospirales;f__Nitrospiraceae;g__Nitrospira_D;s__ | 93.97 | 1.05 | 59.0 | 15,517 | 2,755,985 |
| MAG01000 | EH1_bin.2 | d__Archaea;p__Halobacteriota;c__Methanomicrobia;o__Methanomicrobiales;f__JACTUA01;g__JAJRCM01;s__ | 77.84 | 0.26 | 52.0 | 16,923 | 1,127,192 |
| MAG01001 | EH1_bin.21 | d__Archaea;p__Thermoplasmatota;c__Thermoplasmata;o__UBA10834;f__UBA10834;g__;s__ | 80.5 | 3.12 | 62.0 | 9,487 | 1,718,790 |
| MAG01002 | EH1_bin.23 | d__Bacteria;p__WOR-3;c__WOR-3;o__SM23-42;f__DASVHD01;g__;s__ | 85.12 | 0.65 | 57.0 | 5,229 | 2,426,842 |
| MAG01003 | EH1_bin.24 | d__Bacteria;p__Desulfobacterota;c__SM23-61;o__SM23-61;f__SM23-61;g__SM23-61;s__ | 68.58 | 3.65 | 56.0 | 4,725 | 3,278,069 |
| MAG01004 | EH1_bin.26 | d__Archaea;p__Halobacteriota;c__Methanomicrobia;o__Methanomicrobiales;f__Methanospirillaceae;g__UBA9949;s__ | 55.39 | 0.0 | 55.0 | 4,408 | 696,536 |
| MAG01005 | EH1_bin.27 | d__Bacteria;p__Planctomycetota;c__Phycisphaerae;o__UBA1845;f__UBA1845;g__;s__ | 94.65 | 6.19 | 63.0 | 19,418 | 5,635,094 |
| MAG01006 | EH1_bin.29 | d__Archaea;p__Thermoplasmatota;c__DTKX01;o__DTKX01;f__GCA-020343715;g__;s__ | 56.79 | 0.77 | 69.0 | 3,554 | 1,956,246 |
| MAG01007 | EH1_bin.3 | d__Bacteria;p__Acidobacteriota;c__Thermoanaerobaculia;o__Thermoanaerobaculales;f__Thermoanaerobaculaceae;g__;s__ | 83.8 | 0.76 | 72.0 | 15,033 | 2,592,354 |
| MAG01008 | EH1_bin.31 | d__Archaea;p__Altiarchaeota;c__Altiarchaeia;o__JAFGQM01;f__JAFGQM01;g__JBFYKJ01;s__ | 86.04 | 0.13 | 53.0 | 17,661 | 1,226,381 |
| MAG01009 | EH1_bin.32 | d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Pseudomonadales;f__Azotimanducaceae;g__UBA7803;s__ | 96.29 | 2.2 | 68.0 | 71,070 | 3,803,912 |
| MAG01010 | EH1_bin.33 | d__Archaea;p__Thermoplasmatota;c__E2;o__DHVEG-1;f__DHVEG-1;g__JAGMDE01;s__ | 88.68 | 1.02 | 32.0 | 8,464 | 1,831,025 |
| MAG01011 | EH1_bin.34 | d__Archaea;p__Thermoplasmatota;c__Thermoplasmata;o__RBG-16-68-12;f__JAFNFQ01;g__JAFNFQ01;s__ | 59.18 | 0.84 | 59.0 | 4,334 | 1,278,236 |
| MAG01012 | EH1_bin.35 | d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Burkholderiales;f__UBA6910;g__UBA6910;s__ | 78.67 | 1.9 | 70.0 | 8,566 | 2,316,106 |
| MAG01013 | EH1_bin.37 | d__Bacteria;p__Omnitrophota;c__Koll11;o__Tantalellales;f__Tantalellaceae;g__JAQVSN01;s__ | 63.72 | 2.13 | 55.0 | 4,336 | 1,052,491 |
| MAG01014 | EH1_bin.39 | d__Archaea;p__Thermoplasmatota;c__Thermoplasmata;o__UBA10834;f__UBA10834;g__JAJYIS01;s__ | 76.5 | 0.58 | 58.0 | 7,026 | 1,321,427 |
| MAG01015 | EH1_bin.4 | d__Archaea;p__Asgardarchaeota;c__Thorarchaeia;o__Thorarchaeales;f__Thorarchaeaceae;g__JAWAQK01;s__ | 90.84 | 4.92 | 53.0 | 9,044 | 2,887,180 |
| MAG01016 | EH1_bin.40 | d__Bacteria;p__Edwardsbacteria;c__;o__;f__;g__;s__ | 83.18 | 2.5 | 61.0 | 7,276 | 2,133,650 |
| MAG01017 | EH1_bin.41 | d__Bacteria;p__Omnitrophota;c__Koll11;o__Gygaellales;f__Profunditerraquicolaceae;g__JAPLLR01;s__ | 72.31 | 4.16 | 52.0 | 6,297 | 1,007,499 |
| MAG01018 | EH1_bin.44 | d__Bacteria;p__Desulfobacterota;c__BSN033;o__BSN033;f__UBA1163;g__DATIGG01;s__ | 62.66 | 0.77 | 53.0 | 8,585 | 1,863,136 |
| MAG01019 | EH1_bin.48 | d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Rubrivivax;s__ | 89.94 | 3.59 | 71.0 | 36,145 | 4,408,405 |
| MAG01020 | EH1_bin.49 | d__Bacteria;p__Nitrospirota;c__Thermodesulfovibrionia;o__Thermodesulfovibrionales;f__SM23-35;g__JALHSV01;s__ | 95.65 | 0.88 | 49.0 | 15,761 | 1,667,976 |
| MAG01021 | EH1_bin.5 | d__Archaea;p__Thermoproteota;c__Bathyarchaeia;o__Bathyarchaeales;f__SOJC01;g__GCA-020352645;s__ | 90.06 | 1.09 | 50.0 | 17,387 | 1,254,651 |
| MAG01022 | EH1_bin.50 | d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Burkholderiales;f__Thiobacillaceae;g__PFJX01;s__ | 75.93 | 4.05 | 66.0 | 3,666 | 2,139,056 |
| MAG01023 | EH1_bin.51 | d__Bacteria;p__Desulfobacterota;c__Syntrophobacteria;o__BM002;f__BM002;g__JAGFXI01;s__ | 82.72 | 0.7 | 61.0 | 8,569 | 1,953,049 |
| MAG01024 | EH1_bin.56 | d__Archaea;p__Thermoplasmatota;c__EX4484-6;o__EX4484-6;f__EX4484-6;g__JALOTP01;s__ | 81.31 | 2.19 | 54.0 | 6,920 | 2,222,580 |
| MAG01025 | EH1_bin.57 | d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Burkholderiales;f__UBA6910;g__UBA6910;s__ | 68.3 | 2.98 | 69.0 | 3,743 | 2,459,768 |
| MAG01026 | EH1_bin.59 | d__Bacteria;p__Nitrospirota;c__Thermodesulfovibrionia;o__Thermodesulfovibrionales;f__SM23-35;g__JALHSV01;s__JALHSV01 sp022865525 | 81.44 | 1.95 | 46.0 | 4,423 | 1,193,284 |
| MAG01027 | EH1_bin.6 | d__Bacteria;p__Omnitrophota;c__Koll11;o__2-01-FULL-45-10;f__2-01-FULL-45-10;g__JAGVGJ01;s__ | 67.83 | 0.93 | 51.0 | 4,584 | 709,246 |
| MAG01028 | EH1_bin.61 | d__Bacteria;p__Desulfobacterota;c__Syntrophia;o__Syntrophales;f__Fen-1087;g__JAPLJM01;s__ | 91.72 | 4.02 | 54.0 | 12,977 | 1,917,629 |
| MAG01029 | EH1_bin.63 | d__Bacteria;p__Krumholzibacteriota;c__Krumholzibacteriia;o__Krumholzibacteriales;f__Krumholzibacteriaceae;g__SSS58A;s__ | 95.38 | 0.8 | 66.0 | 18,552 | 2,953,661 |
| MAG01030 | EH1_bin.67 | d__Bacteria;p__Nitrospirota;c__Thermodesulfovibrionia;o__Thermodesulfovibrionales;f__;g__;s__ | 100.0 | 1.3 | 60.0 | 28,700 | 3,049,809 |
| MAG01031 | EH1_bin.68 | d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__VadinHA17;g__LD21;s__ | 60.01 | 0.86 | 41.0 | 6,629 | 2,043,599 |
| MAG01032 | EH1_bin.7 | d__Bacteria;p__Patescibacteriota;c__Patescibacteriia;o__SG8-24;f__SG8-24;g__JBAYFM01;s__ | 78.8 | 0.28 | 62.0 | 3,787 | 870,401 |
| MAG01033 | EH1_bin.71 | d__Bacteria;p__Desulfobacterota;c__Desulfomonilia;o__UBA1062;f__UBA1062;g__MWEI01;s__MWEI01 sp025454155 | 97.75 | 2.32 | 59.0 | 8,245 | 2,744,546 |
| MAG01034 | EH1_bin.74 | d__Bacteria;p__Nitrospirota;c__Thermodesulfovibrionia;o__Thermodesulfovibrionales;f__SM23-35;g__DASPRG01;s__ | 91.02 | 0.4 | 42.0 | 8,763 | 1,564,295 |
| ID | Name | Taxonomy | Completeness | Contamination | GC | N50 | Size |