GWM
Global Wetland Microbiome Database
Overview
| ID | SMP0029 |
|---|---|
| Name | EH2 |
| Type | lake |
| Habitat | sediment |
| Country | China |
| Latitude and longitude | 25.7257 N 100.223 E |
| Altitude (m) | 1992.0 |
| Instrument | illumina NovaSeq X Plus |
| AvgSpotLen (bp) | 300 |
| LibraryLayout | PAIRED |
| Project | PRJNA1430164 |
| Collection Date | |
| Physicochemical properties | |
| TN (g/kg) | 5.8192 |
| TP (g/kg) | 1.1345 |
| TS (g/kg) | 2.6779 |
| TC (g/kg) | 61.2500 |
| Fe (mg/kg) | 41058.4551 |
| Mn (mg/kg) | 1098.1211 |
| C/N | 10.5255 |
| IC (g/kg) | 12.5297 |
| MBC (g/kg) | 0.1732 |
| pH | 7.0900 |
| Water content (%) | 0.8377 |
| NO3- (mg/kg) | 0.4729 |
| NH4+ (mg/kg) | 51.0710 |
Location
Community profile
The microbial community profiled by MetaPhlAn4
MAGs46
The MAGs in SMP0029
| ID | Name | Taxonomy | Completeness | Contamination | GC | N50 | Size |
|---|---|---|---|---|---|---|---|
| MAG01035 | EH2_bin.10 | d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Rubrivivax;s__ | 95.63 | 6.36 | 71.0 | 41,708 | 4,512,499 |
| MAG01036 | EH2_bin.11 | d__Bacteria;p__Acidobacteriota;c__Aminicenantia;o__Aminicenantales;f__RBG-16-66-30;g__;s__ | 62.3 | 1.97 | 63.0 | 31,011 | 4,074,476 |
| MAG01037 | EH2_bin.12 | d__Bacteria;p__Desulfobacterota;c__Desulfomonilia;o__UBA1062;f__UBA1062;g__MWEI01;s__MWEI01 sp025454155 | 90.34 | 1.77 | 59.0 | 10,875 | 2,448,105 |
| MAG01038 | EH2_bin.14 | d__Bacteria;p__Desulfobacterota;c__SM23-61;o__SM23-61;f__SM23-61;g__SM23-61;s__ | 67.72 | 2.62 | 55.0 | 4,630 | 3,771,605 |
| MAG01039 | EH2_bin.15 | d__Archaea;p__Asgardarchaeota;c__Thorarchaeia;o__Thorarchaeales;f__Thorarchaeaceae;g__JAWAQK01;s__ | 91.59 | 3.56 | 53.0 | 9,861 | 3,119,680 |
| MAG01040 | EH2_bin.17 | d__Bacteria;p__Nitrospirota;c__Thermodesulfovibrionia;o__Thermodesulfovibrionales;f__SM23-35;g__DASPRG01;s__ | 93.24 | 1.18 | 42.0 | 7,902 | 1,566,378 |
| MAG01041 | EH2_bin.19 | d__Archaea;p__Thermoplasmatota;c__Thermoplasmata;o__RBG-16-68-12;f__JAFNFQ01;g__JAFNFQ01;s__ | 91.44 | 1.29 | 59.0 | 12,568 | 2,110,769 |
| MAG01042 | EH2_bin.20 | d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__VadinHA17;g__LD21;s__ | 81.59 | 0.47 | 41.0 | 6,661 | 2,381,981 |
| MAG01043 | EH2_bin.21 | d__Archaea;p__Thermoplasmatota;c__Thermoplasmata;o__UBA10834;f__UBA10834;g__;s__ | 85.84 | 3.36 | 62.0 | 8,014 | 1,725,676 |
| MAG01044 | EH2_bin.22 | d__Archaea;p__Halobacteriota;c__Methanomicrobia;o__Methanomicrobiales;f__Methanospirillaceae;g__UBA9949;s__UBA9949 sp028679275 | 86.82 | 3.18 | 54.0 | 12,772 | 1,585,641 |
| MAG01045 | EH2_bin.24 | d__Bacteria;p__Omnitrophota;c__Koll11;o__Tantalellales;f__Tantalellaceae;g__JAQVSN01;s__ | 68.35 | 1.26 | 55.0 | 4,222 | 1,011,973 |
| MAG01046 | EH2_bin.26 | d__Bacteria;p__Edwardsbacteria;c__;o__;f__;g__;s__ | 86.02 | 4.64 | 61.0 | 6,131 | 2,128,977 |
| MAG01047 | EH2_bin.27 | d__Bacteria;p__Acidobacteriota;c__Polarisedimenticolia;o__Polarisedimenticolales;f__DASRJG01;g__;s__ | 100.0 | 2.2 | 70.0 | 9,632 | 3,170,535 |
| MAG01048 | EH2_bin.3 | d__Archaea;p__Thermoplasmatota;c__DTKX01;o__DTKX01;f__GCA-020343715;g__;s__ | 85.75 | 0.76 | 69.0 | 4,047 | 2,262,730 |
| MAG01049 | EH2_bin.30 | d__Bacteria;p__Desulfobacterota;c__Syntrophia;o__Syntrophales;f__Fen-1087;g__JAPLJM01;s__ | 91.28 | 2.23 | 54.0 | 11,055 | 2,124,599 |
| MAG01050 | EH2_bin.31 | d__Bacteria;p__Krumholzibacteriota;c__Krumholzibacteriia;o__Krumholzibacteriales;f__Krumholzibacteriaceae;g__SSS58A;s__ | 90.31 | 1.09 | 66.0 | 10,084 | 2,503,274 |
| MAG01051 | EH2_bin.35 | d__Bacteria;p__Desulfobacterota;c__Syntrophia;o__Syntrophales;f__UBA2185;g__UBA2185;s__ | 80.73 | 4.11 | 48.0 | 4,989 | 1,448,659 |
| MAG01052 | EH2_bin.36 | d__Bacteria;p__Myxococcota_A;c__UBA9160;o__UBA9160;f__SMWR01;g__;s__ | 75.54 | 1.4 | 73.0 | 10,381 | 3,798,644 |
| MAG01053 | EH2_bin.37 | d__Archaea;p__Thermoproteota;c__Bathyarchaeia;o__Bathyarchaeales;f__Bathycorpusculaceae;g__DATKKK01;s__ | 78.37 | 3.32 | 53.0 | 5,397 | 1,127,190 |
| MAG01054 | EH2_bin.4 | d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__SZUA-229;f__SZUA-229;g__JACPVK01;s__ | 86.25 | 5.49 | 51.0 | 4,687 | 2,499,907 |
| MAG01055 | EH2_bin.41 | d__Bacteria;p__Nitrospirota;c__Thermodesulfovibrionia;o__Thermodesulfovibrionales;f__;g__;s__ | 100.0 | 0.04 | 60.0 | 34,474 | 3,196,152 |
| MAG01056 | EH2_bin.43 | d__Bacteria;p__Nitrospirota;c__Nitrospiria;o__Nitrospirales;f__Nitrospiraceae;g__Nitrospira_D;s__Nitrospira_D sp030444405 | 81.69 | 5.31 | 56.0 | 11,752 | 2,677,267 |
| MAG01057 | EH2_bin.47 | d__Bacteria;p__WOR-3;c__WOR-3;o__SM23-42;f__DASVHD01;g__;s__ | 73.63 | 0.39 | 58.0 | 4,354 | 1,817,263 |
| MAG01058 | EH2_bin.48 | d__Bacteria;p__Myxococcota_A;c__UBA9160;o__SZUA-336;f__SZUA-336;g__VGRW01;s__ | 73.31 | 3.76 | 70.0 | 12,407 | 3,740,617 |
| MAG01059 | EH2_bin.49 | d__Bacteria;p__Omnitrophota;c__Koll11;o__Gygaellales;f__Profunditerraquicolaceae;g__;s__ | 85.02 | 3.35 | 43.0 | 4,499 | 1,054,224 |
| MAG01060 | EH2_bin.5 | d__Bacteria;p__Spirochaetota;c__UBA4802;o__UBA4802;f__UBA5368;g__;s__ | 59.84 | 1.58 | 60.0 | 3,296 | 1,738,050 |
| MAG01061 | EH2_bin.53 | d__Archaea;p__Thermoplasmatota;c__Thermoplasmata;o__UBA10834;f__UBA10834;g__JAJYIS01;s__ | 67.39 | 0.73 | 58.0 | 8,737 | 1,118,302 |
| MAG01062 | EH2_bin.54 | d__Archaea;p__Methanobacteriota_B;c__Thermococci;o__Methanofastidiosales;f__;g__;s__ | 66.41 | 1.8 | 57.0 | 2,258 | 1,252,524 |
| MAG01063 | EH2_bin.55 | d__Bacteria;p__Nitrospirota;c__Thermodesulfovibrionia;o__Thermodesulfovibrionales;f__SM23-35;g__JALHSV01;s__JALHSV01 sp022865525 | 79.17 | 0.01 | 46.0 | 4,935 | 978,572 |
| MAG01064 | EH2_bin.58 | d__Archaea;p__Halobacteriota;c__Methanomicrobia;o__Methanomicrobiales;f__JACTUA01;g__JAJRCM01;s__ | 76.19 | 0.5 | 52.0 | 16,765 | 1,132,794 |
| MAG01065 | EH2_bin.6 | d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Burkholderiales;f__Thiobacillaceae;g__PFJX01;s__ | 76.13 | 1.79 | 66.0 | 4,838 | 2,047,290 |
| MAG01066 | EH2_bin.60 | d__Bacteria;p__Acidobacteriota;c__Thermoanaerobaculia;o__Thermoanaerobaculales;f__Thermoanaerobaculaceae;g__;s__ | 91.55 | 0.11 | 72.0 | 16,359 | 2,499,340 |
| MAG01067 | EH2_bin.61 | d__Bacteria;p__Acidobacteriota;c__Aminicenantia;o__Aminicenantales;f__UBA8522;g__;s__ | 87.13 | 3.92 | 54.0 | 12,343 | 2,744,445 |
| MAG01068 | EH2_bin.63 | d__Bacteria;p__Acidobacteriota;c__Aminicenantia;o__Aminicenantales;f__UBA4085;g__JAPKZH01;s__ | 93.96 | 2.62 | 56.0 | 25,145 | 4,392,176 |
| MAG01069 | EH2_bin.65 | d__Bacteria;p__Planctomycetota;c__Phycisphaerae;o__UBA1845;f__UBA1845;g__;s__ | 91.82 | 3.06 | 63.0 | 31,804 | 5,318,854 |
| MAG01070 | EH2_bin.66 | d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Burkholderiales;f__Gallionellaceae;g__39-52-133;s__ | 73.4 | 0.61 | 57.0 | 21,121 | 1,942,164 |
| MAG01071 | EH2_bin.68 | d__Bacteria;p__Nitrospirota;c__Thermodesulfovibrionia;o__SZUA-242;f__SZUA-242;g__SZUA-242;s__ | 93.95 | 2.05 | 61.0 | 13,942 | 3,103,665 |
| MAG01072 | EH2_bin.7 | d__Archaea;p__Thermoplasmatota;c__E2;o__DHVEG-1;f__DHVEG-1;g__JAGMDE01;s__ | 94.85 | 1.03 | 32.0 | 9,640 | 1,946,652 |
| MAG01073 | EH2_bin.71 | d__Archaea;p__Altiarchaeota;c__Altiarchaeia;o__JAFGQM01;f__JAFGQM01;g__JBFYKJ01;s__ | 85.57 | 0.08 | 53.0 | 18,016 | 1,213,709 |
| MAG01074 | EH2_bin.72 | d__Bacteria;p__Nitrospirota;c__Nitrospiria;o__Nitrospirales;f__Nitrospiraceae;g__Nitrospira_D;s__ | 92.85 | 2.78 | 59.0 | 13,043 | 2,738,213 |
| MAG01075 | EH2_bin.74 | d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__Gemmatimonadales;f__GWC2-71-9;g__SZUA-320;s__ | 65.51 | 0.08 | 70.0 | 6,231 | 2,034,146 |
| MAG01076 | EH2_bin.75 | d__Archaea;p__Thermoproteota;c__Bathyarchaeia;o__Bathyarchaeales;f__SOJC01;g__;s__ | 68.19 | 1.59 | 51.0 | 10,396 | 831,677 |
| MAG01077 | EH2_bin.8 | d__Bacteria;p__Myxococcota_A;c__UBA9160;o__UBA9160;f__UBA6930;g__DATAGA01;s__ | 81.91 | 3.5 | 74.0 | 4,253 | 3,232,674 |
| MAG01078 | EH2_bin.80 | d__Archaea;p__Halobacteriota;c__Methanomicrobia;o__Methanomicrobiales;f__JACTUA01;g__JAJRCY01;s__ | 60.31 | 1.37 | 64.0 | 3,468 | 1,030,038 |
| MAG01079 | EH2_bin.81 | d__Bacteria;p__Nitrospirota;c__Thermodesulfovibrionia;o__Thermodesulfovibrionales;f__SM23-35;g__JALHSV01;s__ | 95.68 | 0.94 | 49.0 | 16,302 | 1,764,147 |
| MAG01080 | EH2_bin.9 | d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Pseudomonadales;f__Azotimanducaceae;g__UBA7803;s__ | 92.44 | 3.78 | 68.0 | 50,529 | 3,760,025 |
| ID | Name | Taxonomy | Completeness | Contamination | GC | N50 | Size |