GWM
Global Wetland Microbiome Database
Overview
| ID | SMP0032 |
|---|---|
| Name | GDHHQS2 |
| Type | river |
| Habitat | sediment |
| Country | China |
| Latitude and longitude | 37.756667 N 95.793611 E |
| Altitude (m) | 3976.0 |
| Instrument | illumina NovaSeq X Plus |
| AvgSpotLen (bp) | 300 |
| LibraryLayout | PAIRED |
| Project | PRJNA1430164 |
| Collection Date | 2023-06-20 |
| Physicochemical properties | |
| TN (g/kg) | 0.7483 |
| TP (g/kg) | 0.6577 |
| TS (g/kg) | 0.1152 |
| TC (g/kg) | 17.5300 |
| Fe (mg/kg) | 29572.4508 |
| Mn (mg/kg) | 610.0179 |
| C/N | 23.4258 |
| IC (g/kg) | 15.1412 |
| MBC (g/kg) | 0.1641 |
| pH | 8.3300 |
| Water content (%) | 0.2500 |
| NO3- (mg/kg) | |
| NH4+ (mg/kg) | 2.9194 |
Location
Community profile
The microbial community profiled by MetaPhlAn4
MAGs50
The MAGs in SMP0032
| ID | Name | Taxonomy | Completeness | Contamination | GC | N50 | Size |
|---|---|---|---|---|---|---|---|
| MAG01200 | GDHHQS2_bin.1 | d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Burkholderiales;f__SG8-39;g__JAABQT01;s__ | 75.47 | 2.13 | 70.0 | 9,042 | 2,047,230 |
| MAG01201 | GDHHQS2_bin.11 | d__Bacteria;p__Nitrospirota;c__Nitrospiria;o__2-01-FULL-66-17;f__2-01-FULL-66-17;g__JBFLXB01;s__ | 70.38 | 0.1 | 64.0 | 4,999 | 1,529,951 |
| MAG01202 | GDHHQS2_bin.12 | d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Burkholderiales;f__SG8-39;g__2-02-FULL-66-14;s__ | 82.49 | 5.52 | 66.0 | 13,925 | 3,543,472 |
| MAG01203 | GDHHQS2_bin.14 | d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__Longimicrobiales;f__RSA9;g__;s__ | 74.38 | 1.99 | 62.0 | 5,510 | 3,000,235 |
| MAG01204 | GDHHQS2_bin.15 | d__Bacteria;p__Acidobacteriota;c__Polarisedimenticolia;o__Gp22-AA2;f__Gp22-AA2;g__JAGYID01;s__ | 91.16 | 1.12 | 72.0 | 25,454 | 3,318,789 |
| MAG01205 | GDHHQS2_bin.16 | d__Bacteria;p__Acidobacteriota;c__Thermoanaerobaculia;o__Gp7-AA8;f__Gp7-AA8;g__;s__ | 81.6 | 0.25 | 62.0 | 13,141 | 3,686,399 |
| MAG01206 | GDHHQS2_bin.17 | d__Bacteria;p__Patescibacteriota;c__Minisyncoccia;o__UBA9973;f__Zambryskibacteraceae;g__UBA5004;s__ | 85.56 | 0.19 | 49.0 | 19,493 | 477,511 |
| MAG01207 | GDHHQS2_bin.18 | d__Bacteria;p__Acidobacteriota;c__Vicinamibacteria;o__Vicinamibacterales;f__UBA2999;g__12-FULL-67-14b;s__ | 69.75 | 3.21 | 65.0 | 5,270 | 5,775,993 |
| MAG01208 | GDHHQS2_bin.19 | d__Bacteria;p__Actinomycetota;c__Acidimicrobiia;o__UBA5794;f__ZC4RG35;g__DATEEG01;s__ | 68.95 | 2.11 | 63.0 | 2,724 | 2,286,856 |
| MAG01209 | GDHHQS2_bin.20 | d__Bacteria;p__Acidobacteriota;c__Vicinamibacteria;o__Vicinamibacterales;f__SCN-69-37;g__JANOGJ01;s__ | 83.01 | 2.61 | 69.0 | 13,429 | 2,980,432 |
| MAG01210 | GDHHQS2_bin.22 | d__Bacteria;p__Actinomycetota;c__Acidimicrobiia;o__UBA5794;f__UBA11373;g__UBA11373;s__ | 54.91 | 0.65 | 68.0 | 3,788 | 1,373,420 |
| MAG01211 | GDHHQS2_bin.24 | d__Bacteria;p__Chloroflexota;c__Anaerolineae;o__Anaerolineales;f__UBA6663;g__;s__ | 87.64 | 3.39 | 65.0 | 9,318 | 3,179,268 |
| MAG01212 | GDHHQS2_bin.25 | d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__Gemmatimonadales;f__Gemmatimonadaceae;g__JAICNG01;s__ | 71.32 | 3.13 | 66.0 | 19,748 | 2,873,475 |
| MAG01213 | GDHHQS2_bin.26 | d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__JANNEA01;f__JANNEA01;g__JANNEA01;s__ | 83.46 | 1.7 | 70.0 | 15,105 | 2,107,672 |
| MAG01214 | GDHHQS2_bin.27 | d__Bacteria;p__Acidobacteriota;c__Polarisedimenticolia;o__Gp22-AA2;f__Gp22-AA2;g__JANNTZ01;s__ | 94.71 | 3.02 | 70.0 | 30,190 | 3,893,439 |
| MAG01215 | GDHHQS2_bin.28 | d__Bacteria;p__Chloroflexota;c__Dehalococcoidia;o__DSTF01;f__WHTK01;g__WHTK01;s__ | 62.23 | 0.64 | 68.0 | 4,455 | 1,550,875 |
| MAG01216 | GDHHQS2_bin.3 | d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Eutrophobiales;f__Eutrophobiaceae;g__2-02-FULL-47-50;s__ | 82.77 | 0.03 | 49.0 | 9,190 | 1,737,019 |
| MAG01217 | GDHHQS2_bin.30 | d__Archaea;p__Thermoproteota;c__Nitrososphaeria;o__Nitrososphaerales;f__Nitrososphaeraceae;g__Nitrososphaera;s__Nitrososphaera sp035760305 | 73.47 | 0.45 | 56.0 | 9,502 | 1,211,986 |
| MAG01218 | GDHHQS2_bin.33 | d__Bacteria;p__Chloroflexota;c__Anaerolineae;o__Anaerolineales;f__Villigracilaceae;g__UBA5195;s__ | 100.0 | 7.03 | 52.0 | 81,013 | 6,065,814 |
| MAG01219 | GDHHQS2_bin.34 | d__Bacteria;p__Zixibacteria;c__MSB-5A5;o__GN15;f__FEB-12;g__FEB-12;s__ | 75.63 | 0.62 | 52.0 | 5,807 | 2,048,636 |
| MAG01220 | GDHHQS2_bin.4 | d__Bacteria;p__Bacteroidota_A;c__UBA10030;o__UBA10030;f__UBA6906;g__JAERML01;s__ | 66.99 | 1.41 | 56.0 | 5,820 | 1,827,145 |
| MAG01221 | GDHHQS2_bin.41 | d__Bacteria;p__Eisenbacteria;c__RBG-16-71-46;o__RBG-16-71-46;f__RBG-16-71-46;g__DASTBI01;s__ | 85.92 | 3.86 | 70.0 | 22,627 | 3,199,713 |
| MAG01222 | GDHHQS2_bin.42 | d__Bacteria;p__Acidobacteriota;c__Thermoanaerobaculia;o__Gp7-AA8;f__Gp7-AA8;g__JBBPII01;s__ | 57.88 | 0.92 | 67.0 | 6,146 | 2,810,853 |
| MAG01223 | GDHHQS2_bin.43 | d__Bacteria;p__Chloroflexota;c__Anaerolineae;o__Anaerolineales;f__UBA11579;g__JAMCZK01;s__ | 72.72 | 0.29 | 57.0 | 16,552 | 1,579,785 |
| MAG01224 | GDHHQS2_bin.46 | d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Burkholderia;s__Burkholderia sp002223055 | 100.0 | 0.78 | 67.0 | 129,483 | 7,918,266 |
| MAG01225 | GDHHQS2_bin.47 | d__Bacteria;p__Chloroflexota;c__Anaerolineae;o__Anaerolineales;f__Villigracilaceae;g__RBG-16-51-16;s__ | 82.18 | 1.52 | 52.0 | 11,264 | 2,556,960 |
| MAG01226 | GDHHQS2_bin.48 | d__Bacteria;p__Armatimonadota;c__Fimbriimonadia;o__Fimbriimonadales;f__Fimbriimonadaceae;g__JBBCJD01;s__ | 94.52 | 0.37 | 52.0 | 38,284 | 2,557,762 |
| MAG01227 | GDHHQS2_bin.5 | d__Bacteria;p__Bacteroidota_A;c__UBA10030;o__UBA10030;f__UBA6906;g__UBA6906;s__ | 92.25 | 0.9 | 61.0 | 8,238 | 3,104,218 |
| MAG01228 | GDHHQS2_bin.50 | d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Pseudomonadales;f__Moraxellaceae;g__JAJNDL01;s__ | 98.7 | 2.29 | 68.0 | 25,216 | 3,064,564 |
| MAG01229 | GDHHQS2_bin.52 | d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Burkholderiales;f__Usitatibacteraceae;g__Usitatibacter;s__ | 77.64 | 1.48 | 69.0 | 12,016 | 3,438,951 |
| MAG01230 | GDHHQS2_bin.54 | d__Bacteria;p__Acidobacteriota;c__Terriglobia;o__Bryobacterales;f__Bryobacteraceae;g__CADEFT01;s__ | 85.31 | 6.97 | 62.0 | 7,055 | 7,976,164 |
| MAG01231 | GDHHQS2_bin.55 | d__Bacteria;p__Pseudomonadota;c__Alphaproteobacteria;o__Dongiales;f__Dongiaceae;g__JAWXBK01;s__ | 73.87 | 3.36 | 64.0 | 6,823 | 2,671,481 |
| MAG01232 | GDHHQS2_bin.56 | d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__Gemmatimonadales;f__GWC2-71-9;g__JABFSM01;s__ | 54.82 | 0.5 | 67.0 | 5,744 | 1,895,062 |
| MAG01233 | GDHHQS2_bin.57 | d__Bacteria;p__Pseudomonadota;c__Alphaproteobacteria;o__Ferrovibrionales;f__Ferrovibrionaceae;g__JAFKFH01;s__ | 88.57 | 1.44 | 68.0 | 14,149 | 6,461,188 |
| MAG01234 | GDHHQS2_bin.58 | d__Bacteria;p__Spirochaetota;c__Spirochaetia;o__SZUA-6;f__Fen-1364;g__;s__ | 87.73 | 0.97 | 66.0 | 6,935 | 2,873,293 |
| MAG01235 | GDHHQS2_bin.59 | d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__Gemmatimonadales;f__Gemmatimonadaceae;g__UBA4720;s__ | 74.67 | 1.6 | 62.0 | 10,562 | 2,359,845 |
| MAG01236 | GDHHQS2_bin.60 | d__Bacteria;p__Nitrospirota;c__UBA9217;o__UBA9217;f__UBA9217;g__GWC2-56-14;s__ | 100.0 | 0.35 | 56.0 | 165,811 | 4,013,517 |
| MAG01237 | GDHHQS2_bin.61 | d__Bacteria;p__Myxococcota;c__Polyangia;o__Polyangiales;f__Polyangiaceae;g__DASZVB01;s__ | 78.58 | 1.41 | 70.0 | 7,725 | 5,211,462 |
| MAG01238 | GDHHQS2_bin.62 | d__Bacteria;p__Acidobacteriota;c__Aminicenantia;o__Aminicenantales;f__RBG-16-66-30;g__RBG-16-66-30;s__ | 91.48 | 2.16 | 65.0 | 13,525 | 3,027,929 |
| MAG01239 | GDHHQS2_bin.63 | d__Bacteria;p__Chloroflexota;c__Dehalococcoidia;o__DSTF01;f__JACRBR01;g__DTUCFX13;s__ | 77.93 | 1.61 | 65.0 | 9,687 | 2,056,697 |
| MAG01240 | GDHHQS2_bin.64 | d__Bacteria;p__Zixibacteria;c__MSB-5A5;o__GN15;f__FEB-12;g__JBBTMW01;s__ | 95.09 | 1.42 | 54.0 | 13,824 | 2,664,621 |
| MAG01241 | GDHHQS2_bin.65 | d__Bacteria;p__Acidobacteriota;c__Thermoanaerobaculia;o__UBA5066;f__Gp7-AA6;g__Gp7-AA6;s__ | 77.48 | 0.95 | 69.0 | 4,704 | 2,315,582 |
| MAG01242 | GDHHQS2_bin.66 | d__Bacteria;p__CAKKQC01;c__CAKKQC01;o__;f__;g__;s__ | 66.93 | 0.61 | 70.0 | 14,806 | 2,781,767 |
| MAG01243 | GDHHQS2_bin.67 | d__Bacteria;p__Acidobacteriota;c__Thermoanaerobaculia;o__Multivoradales;f__JAGPDF01;g__JACTMI01;s__ | 90.88 | 0.31 | 72.0 | 31,954 | 3,553,619 |
| MAG01244 | GDHHQS2_bin.68 | d__Bacteria;p__Acidobacteriota;c__Polarisedimenticolia;o__Gp22-AA2;f__Gp22-AA2;g__Gp22-AA3;s__ | 99.03 | 1.26 | 70.0 | 27,800 | 4,372,370 |
| MAG01245 | GDHHQS2_bin.69 | d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Steroidobacterales;f__Steroidobacteraceae;g__SCUD01;s__ | 77.16 | 0.35 | 66.0 | 18,964 | 2,286,921 |
| MAG01246 | GDHHQS2_bin.7 | d__Bacteria;p__Acidobacteriota;c__Thermoanaerobaculia;o__Gp7-AA8;f__Gp7-AA8;g__QHVT01;s__ | 90.64 | 2.07 | 65.0 | 14,544 | 5,740,077 |
| MAG01247 | GDHHQS2_bin.70 | d__Bacteria;p__Chloroflexota;c__Anaerolineae;o__Aggregatilineales;f__UBA3940;g__JAFGMS01;s__ | 76.81 | 0.58 | 58.0 | 77,582 | 4,506,790 |
| MAG01248 | GDHHQS2_bin.73 | d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__Gemmatimonadales;f__GWC2-71-9;g__SZUA-320;s__ | 65.5 | 2.92 | 68.0 | 5,615 | 2,086,419 |
| MAG01249 | GDHHQS2_bin.8 | d__Bacteria;p__Acidobacteriota;c__Vicinamibacteria;o__Vicinamibacterales;f__UBA2999;g__CAWULT01;s__ | 84.51 | 0.65 | 68.0 | 9,003 | 4,099,535 |
| ID | Name | Taxonomy | Completeness | Contamination | GC | N50 | Size |