GWM
Global Wetland Microbiome Database
Overview
| ID | SMP0034 |
|---|---|
| Name | GGS1 |
| Type | marsh |
| Habitat | soil |
| Country | China |
| Latitude and longitude | 23.083333 N 109.666667 E |
| Altitude (m) | 32.0 |
| Instrument | illumina NovaSeq X Plus |
| AvgSpotLen (bp) | 300 |
| LibraryLayout | PAIRED |
| Project | PRJNA1430164 |
| Collection Date | 2022-10-17 |
| Physicochemical properties | |
| TN (g/kg) | 0.6860 |
| TP (g/kg) | 0.4608 |
| TS (g/kg) | 0.1675 |
| TC (g/kg) | 4.2300 |
| Fe (mg/kg) | |
| Mn (mg/kg) | |
| C/N | 6.1664 |
| IC (g/kg) | 2.2948 |
| MBC (g/kg) | 0.1224 |
| pH | 8.0400 |
| Water content (%) | 0.2253 |
| NO3- (mg/kg) | -0.8697 |
| NH4+ (mg/kg) | 2.7602 |
Location
Community profile
The microbial community profiled by MetaPhlAn4
MAGs55
The MAGs in SMP0034
| ID | Name | Taxonomy | Completeness | Contamination | GC | N50 | Size |
|---|---|---|---|---|---|---|---|
| MAG01312 | GGS1_bin.1 | d__Bacteria;p__Patescibacteriota;c__Minisyncoccia;o__2-02-FULL-40-12;f__GWA2-44-9;g__;s__ | 100.0 | 0.3 | 55.0 | 453,599 | 571,430 |
| MAG01313 | GGS1_bin.10 | d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Hylemonella;s__ | 63.05 | 1.16 | 67.0 | 14,417 | 1,878,070 |
| MAG01314 | GGS1_bin.11 | d__Bacteria;p__Actinomycetota;c__Actinomycetes;o__Actinomycetales;f__Microbacteriaceae;g__Microcella;s__ | 87.4 | 0.12 | 72.0 | 18,047 | 2,350,280 |
| MAG01315 | GGS1_bin.13 | d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Aquabacterium;s__Aquabacterium sp918741295 | 71.08 | 2.54 | 64.0 | 4,124 | 3,359,209 |
| MAG01316 | GGS1_bin.16 | d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Piscinibacter;s__ | 78.79 | 4.6 | 70.0 | 18,348 | 4,252,250 |
| MAG01317 | GGS1_bin.17 | d__Bacteria;p__Chloroflexota;c__Anaerolineae;o__UBA7937;f__UBA7937;g__JACPWV01;s__ | 94.46 | 1.4 | 62.0 | 10,733 | 1,950,591 |
| MAG01318 | GGS1_bin.18 | d__Bacteria;p__Desulfobacterota;c__GWC2-55-46;o__GWC2-55-46;f__GWC2-55-46;g__GWA2-54-12;s__ | 95.28 | 3.39 | 58.0 | 12,910 | 2,295,946 |
| MAG01319 | GGS1_bin.2 | d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Steroidobacterales;f__Steroidobacteraceae;g__ZC4RG30;s__ | 86.83 | 1.78 | 67.0 | 104,908 | 3,864,095 |
| MAG01320 | GGS1_bin.20 | d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__Gemmatimonadales;f__GWC2-71-9;g__20CM-2-65-7;s__ | 79.64 | 4.18 | 66.0 | 9,387 | 3,093,542 |
| MAG01321 | GGS1_bin.22 | d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Xanthomonadales;f__Xanthomonadaceae;g__Cognatilysobacter;s__Cognatilysobacter tabacisoli | 85.41 | 2.2 | 72.0 | 7,295 | 2,607,921 |
| MAG01322 | GGS1_bin.27 | d__Archaea;p__Thermoproteota;c__Methanomethylicia;o__;f__;g__;s__ | 63.37 | 0.62 | 53.0 | 5,690 | 709,198 |
| MAG01323 | GGS1_bin.3 | d__Archaea;p__Thermoproteota;c__Nitrososphaeria;o__Nitrososphaerales;f__Nitrosopumilaceae;g__;s__ | 93.63 | 2.76 | 38.0 | 19,799 | 1,236,878 |
| MAG01324 | GGS1_bin.30 | d__Bacteria;p__Pseudomonadota;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Tabrizicola;s__ | 100.0 | 0.09 | 65.0 | 25,323 | 3,612,199 |
| MAG01325 | GGS1_bin.31 | d__Bacteria;p__Desulfobacterota_B;c__Binatia;o__UBA9968;f__UBA9968;g__JACPFE01;s__ | 84.0 | 6.35 | 59.0 | 5,546 | 3,886,726 |
| MAG01326 | GGS1_bin.34 | d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Polaromonas;s__ | 73.68 | 2.89 | 63.0 | 8,204 | 3,505,641 |
| MAG01327 | GGS1_bin.37 | d__Bacteria;p__Patescibacteriota;c__Microgenomatia;o__GWA2-44-7;f__UBA8517;g__;s__ | 90.15 | 0.65 | 47.0 | 15,934 | 533,838 |
| MAG01328 | GGS1_bin.38 | d__Bacteria;p__Acidobacteriota;c__Terriglobia;o__Acidiferrales;f__UBA7541;g__DATFXF01;s__ | 78.57 | 5.47 | 64.0 | 6,899 | 2,526,680 |
| MAG01329 | GGS1_bin.39 | d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Pseudomonadales;f__Moraxellaceae;g__Perlucidibaca;s__ | 100.0 | 0.15 | 56.0 | 134,968 | 2,300,824 |
| MAG01330 | GGS1_bin.4 | d__Bacteria;p__Acidobacteriota;c__Terriglobia;o__Acidiferrales;f__UBA7541;g__;s__ | 75.17 | 1.7 | 63.0 | 18,770 | 1,733,814 |
| MAG01331 | GGS1_bin.41 | d__Bacteria;p__Nitrospirota;c__Nitrospiria;o__Nitrospirales;f__Nitrospiraceae;g__2-02-FULL-62-14;s__ | 84.15 | 4.04 | 63.0 | 12,365 | 2,178,603 |
| MAG01332 | GGS1_bin.42 | d__Bacteria;p__Chloroflexota;c__Anaerolineae;o__Anaerolineales;f__E44-bin32;g__JADFRG01;s__ | 81.12 | 2.89 | 67.0 | 4,505 | 1,897,760 |
| MAG01333 | GGS1_bin.43 | d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Hydrogenophaga;s__Hydrogenophaga sp010104355 | 76.85 | 3.18 | 66.0 | 27,072 | 3,537,856 |
| MAG01334 | GGS1_bin.44 | d__Bacteria;p__Patescibacteriota;c__Saccharimonadia;o__Saccharimonadales;f__UBA4665;g__JARIHD01;s__ | 93.54 | 1.21 | 54.0 | 26,869 | 1,057,622 |
| MAG01335 | GGS1_bin.45 | d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Palsa-965;f__Palsa-965;g__GCA-2737665;s__ | 89.02 | 2.73 | 55.0 | 4,720 | 4,551,304 |
| MAG01336 | GGS1_bin.46 | d__Bacteria;p__Chloroflexota;c__Anaerolineae;o__Anaerolineales;f__UBA6663;g__;s__ | 78.73 | 3.05 | 64.0 | 7,874 | 3,724,270 |
| MAG01337 | GGS1_bin.47 | d__Bacteria;p__Acidobacteriota;c__Polarisedimenticolia;o__Gp22-AA2;f__Gp22-AA2;g__JANNTZ01;s__ | 74.99 | 3.67 | 71.0 | 6,023 | 3,223,701 |
| MAG01338 | GGS1_bin.49 | d__Bacteria;p__Nitrospirota;c__UBA9217;o__UBA9217;f__UBA9217;g__;s__ | 87.08 | 1.11 | 60.0 | 6,970 | 2,717,072 |
| MAG01339 | GGS1_bin.50 | d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Acidiferrobacterales;f__Sulfurifustaceae;g__JAHFQD01;s__ | 62.43 | 1.78 | 63.0 | 4,779 | 2,023,410 |
| MAG01340 | GGS1_bin.52 | d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Pseudomonadales;f__Moraxellaceae;g__UBA2031;s__ | 99.1 | 0.55 | 58.0 | 333,035 | 3,211,415 |
| MAG01341 | GGS1_bin.54 | d__Bacteria;p__Myxococcota;c__Myxococcia;o__Myxococcales;f__Anaeromyxobacteraceae;g__DASTPH01;s__ | 89.25 | 3.11 | 74.0 | 11,849 | 4,081,459 |
| MAG01342 | GGS1_bin.56 | d__Bacteria;p__Myxococcota;c__Polyangia;o__Haliangiales;f__Haliangiaceae;g__;s__ | 58.72 | 1.68 | 71.0 | 7,376 | 3,526,852 |
| MAG01343 | GGS1_bin.57 | d__Bacteria;p__Chloroflexota;c__Anaerolineae;o__JACRMK01;f__JACRMK01;g__JACQEC01;s__ | 56.85 | 0.05 | 62.0 | 4,232 | 1,838,695 |
| MAG01344 | GGS1_bin.58 | d__Bacteria;p__Chlamydiota;c__Chlamydiia;o__Chlamydiales;f__FEN-1388;g__SZAS-7;s__ | 95.67 | 1.46 | 44.0 | 11,055 | 2,659,760 |
| MAG01345 | GGS1_bin.59 | d__Bacteria;p__Zhuqueibacterota;c__Zhuqueibacteria;o__Zhuqueibacterales;f__Zhuqueibacteraceae;g__Zhuqueibacter;s__ | 81.05 | 2.01 | 53.0 | 4,138 | 4,761,503 |
| MAG01346 | GGS1_bin.61 | d__Bacteria;p__Chlamydiota;c__Chlamydiia;o__Chlamydiales;f__Rhabdochlamydiaceae;g__PALSA-1444;s__ | 86.08 | 3.99 | 44.0 | 9,999 | 1,452,931 |
| MAG01347 | GGS1_bin.62 | d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__CADEEN01;s__ | 72.44 | 2.08 | 70.0 | 8,697 | 2,632,179 |
| MAG01348 | GGS1_bin.63 | d__Bacteria;p__Myxococcota;c__Polyangia;o__Haliangiales;f__Haliangiaceae;g__JABFXX01;s__ | 98.28 | 9.41 | 73.0 | 103,794 | 8,287,798 |
| MAG01349 | GGS1_bin.64 | d__Bacteria;p__Nitrospirota;c__Nitrospiria;o__JACRHA01;f__JACRHA01;g__JACRHA01;s__ | 83.02 | 5.67 | 46.0 | 2,401 | 1,853,684 |
| MAG01350 | GGS1_bin.65 | d__Bacteria;p__Acidobacteriota;c__Vicinamibacteria;o__Fen-336;f__Fen-336;g__JAICEW01;s__ | 85.24 | 1.76 | 73.0 | 16,179 | 5,180,056 |
| MAG01351 | GGS1_bin.66 | d__Bacteria;p__Acidobacteriota;c__Vicinamibacteria;o__Fen-336;f__Fen-336;g__JACQGI01;s__ | 82.74 | 4.31 | 67.0 | 6,226 | 3,453,806 |
| MAG01352 | GGS1_bin.67 | d__Bacteria;p__Myxococcota;c__Polyangia;o__Haliangiales;f__Haliangiaceae;g__JABFXX01;s__ | 86.66 | 7.05 | 68.0 | 12,095 | 7,923,010 |
| MAG01353 | GGS1_bin.68 | d__Bacteria;p__Desulfobacterota_B;c__Binatia;o__UBA9968;f__UBA9968;g__UBA9968;s__ | 97.97 | 1.53 | 59.0 | 20,543 | 3,984,694 |
| MAG01354 | GGS1_bin.69 | d__Bacteria;p__Actinomycetota;c__Actinomycetes;o__Propionibacteriales;f__Nocardioidaceae;g__Marmoricola;s__ | 64.39 | 1.78 | 71.0 | 4,246 | 2,692,968 |
| MAG01355 | GGS1_bin.70 | d__Bacteria;p__Nitrospirota;c__Nitrospiria;o__2-01-FULL-66-17;f__2-01-FULL-66-17;g__JBFLXB01;s__ | 72.51 | 3.92 | 64.0 | 21,694 | 2,177,832 |
| MAG01356 | GGS1_bin.73 | d__Bacteria;p__Pseudomonadota;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Novosphingobium;s__Novosphingobium sp002454125 | 83.65 | 3.03 | 65.0 | 6,139 | 2,349,296 |
| MAG01357 | GGS1_bin.74 | d__Bacteria;p__Methylomirabilota;c__Methylomirabilia;o__Methylomirabilales;f__CSP1-5;g__CSP1-5;s__ | 50.59 | 0.06 | 63.0 | 4,644 | 1,035,651 |
| MAG01358 | GGS1_bin.75 | d__Archaea;p__Thermoplasmatota;c__Thermoplasmata;o__RBG-16-68-12;f__RBG-16-68-12;g__EA-19;s__ | 79.38 | 5.74 | 63.0 | 22,778 | 1,954,744 |
| MAG01359 | GGS1_bin.77 | d__Bacteria;p__Nitrospirota;c__Nitrospiria;o__2-01-FULL-66-17;f__2-01-FULL-66-17;g__JBFLXB01;s__ | 82.4 | 1.48 | 64.0 | 18,344 | 1,903,442 |
| MAG01360 | GGS1_bin.81 | d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Burkholderiales;f__SG8-39;g__JAABQT01;s__ | 75.84 | 0.57 | 70.0 | 23,143 | 2,330,507 |
| MAG01361 | GGS1_bin.82 | d__Bacteria;p__Chloroflexota;c__Anaerolineae;o__Aggregatilineales;f__;g__;s__ | 80.02 | 5.87 | 62.0 | 3,316 | 3,766,284 |
| MAG01362 | GGS1_bin.84 | d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__ELB16-189;s__ | 85.25 | 3.51 | 43.0 | 10,152 | 3,313,966 |
| MAG01363 | GGS1_bin.85 | d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Ramlibacter;s__ | 81.76 | 4.01 | 68.0 | 23,239 | 4,229,541 |
| MAG01364 | GGS1_bin.86 | d__Archaea;p__Thermoproteota;c__Nitrososphaeria;o__Nitrososphaerales;f__UBA213;g__;s__ | 73.63 | 0.74 | 55.0 | 6,806 | 864,258 |
| MAG01365 | GGS1_bin.87 | d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas_E;s__ | 75.14 | 3.54 | 66.0 | 4,716 | 3,620,287 |
| MAG01366 | GGS1_bin.9 | d__Archaea;p__Thermoplasmatota;c__DTKX01;o__DTKX01;f__DATEUP01;g__DATEUP01;s__ | 65.63 | 1.01 | 70.0 | 4,932 | 2,240,157 |
| ID | Name | Taxonomy | Completeness | Contamination | GC | N50 | Size |