GWM
Global Wetland Microbiome Database
Overview
| ID | SMP0037 |
|---|---|
| Name | GNS1 |
| Type | marsh |
| Habitat | soil |
| Country | China |
| Latitude and longitude | 33.648611 N 101.889444 E |
| Altitude (m) | 3487.0 |
| Instrument | illumina NovaSeq X Plus |
| AvgSpotLen (bp) | 300 |
| LibraryLayout | PAIRED |
| Project | PRJNA1430164 |
| Collection Date | 2022-11-11 |
| Physicochemical properties | |
| TN (g/kg) | 3.1785 |
| TP (g/kg) | 0.6423 |
| TS (g/kg) | 0.2908 |
| TC (g/kg) | 48.2600 |
| Fe (mg/kg) | 26596.0784 |
| Mn (mg/kg) | 571.5686 |
| C/N | 15.1833 |
| IC (g/kg) | 38.7635 |
| MBC (g/kg) | 0.4979 |
| pH | 6.9500 |
| Water content (%) | 0.4531 |
| NO3- (mg/kg) | 1.1191 |
| NH4+ (mg/kg) | 5.6515 |
Location
Community profile
The microbial community profiled by MetaPhlAn4
MAGs38
The MAGs in SMP0037
| ID | Name | Taxonomy | Completeness | Contamination | GC | N50 | Size |
|---|---|---|---|---|---|---|---|
| MAG01415 | GNS1_bin.10 | d__Bacteria;p__Acidobacteriota;c__Thermoanaerobaculia;o__UBA5066;f__Gp7-AA6;g__DATFTF01;s__ | 64.28 | 0.1 | 66.0 | 16,277 | 2,942,070 |
| MAG01416 | GNS1_bin.11 | d__Bacteria;p__Actinomycetota;c__UBA4738;o__UBA4738;f__HRBIN12;g__CALGFI01;s__ | 62.73 | 1.47 | 71.0 | 4,699 | 1,936,603 |
| MAG01417 | GNS1_bin.13 | d__Bacteria;p__Chloroflexota;c__Anaerolineae;o__Anaerolineales;f__Villigracilaceae;g__Defluviilinea;s__ | 81.95 | 1.09 | 51.0 | 8,534 | 3,343,025 |
| MAG01418 | GNS1_bin.14 | d__Bacteria;p__Desulfobacterota_B;c__Binatia;o__UTPRO1;f__UTPRO1;g__;s__ | 76.18 | 1.26 | 70.0 | 8,305 | 3,114,525 |
| MAG01419 | GNS1_bin.15 | d__Bacteria;p__Acidobacteriota;c__Vicinamibacteria;o__Fen-336;f__Fen-336;g__JACQGI01;s__ | 58.62 | 0.14 | 69.0 | 8,024 | 3,028,987 |
| MAG01420 | GNS1_bin.16 | d__Bacteria;p__Myxococcota;c__Myxococcia;o__Myxococcales;f__Anaeromyxobacteraceae;g__;s__ | 74.01 | 0.47 | 73.0 | 4,548 | 2,466,129 |
| MAG01421 | GNS1_bin.20 | d__Bacteria;p__Actinomycetota;c__Acidimicrobiia;o__Acidimicrobiales;f__Ilumatobacteraceae;g__JAENVT01;s__ | 87.37 | 3.04 | 65.0 | 10,729 | 4,056,411 |
| MAG01422 | GNS1_bin.22 | d__Bacteria;p__Chloroflexota;c__Anaerolineae;o__Anaerolineales;f__E44-bin32;g__DYJB01;s__ | 76.88 | 1.22 | 67.0 | 6,488 | 2,314,984 |
| MAG01423 | GNS1_bin.23 | d__Bacteria;p__Acidobacteriota;c__Thermoanaerobaculia;o__Gp7-AA8;f__Gp7-AA8;g__;s__ | 81.37 | 1.96 | 64.0 | 9,562 | 3,678,536 |
| MAG01424 | GNS1_bin.24 | d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__DAINBQ01;s__ | 90.99 | 1.08 | 65.0 | 24,519 | 3,251,779 |
| MAG01425 | GNS1_bin.25 | d__Bacteria;p__Bacteroidota_A;c__UBA10030;o__UBA10030;f__UBA10030;g__JANOGR01;s__ | 74.26 | 0.23 | 51.0 | 7,122 | 1,658,578 |
| MAG01426 | GNS1_bin.26 | d__Bacteria;p__Acidobacteriota;c__Thermoanaerobaculia;o__Gp7-AA8;f__Gp7-AA8;g__DASVHS01;s__ | 86.83 | 0.61 | 64.0 | 8,120 | 3,688,136 |
| MAG01427 | GNS1_bin.27 | d__Bacteria;p__Acidobacteriota;c__Thermoanaerobaculia;o__UBA5066;f__UBA5066;g__;s__ | 87.69 | 3.53 | 70.0 | 6,039 | 2,771,557 |
| MAG01428 | GNS1_bin.28 | d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Burkholderiales;f__SG8-39;g__JAABQT01;s__ | 97.81 | 8.1 | 68.0 | 7,902 | 3,310,139 |
| MAG01429 | GNS1_bin.3 | d__Bacteria;p__Acidobacteriota;c__Terriglobia;o__Terriglobales;f__JAHFUA01;g__DASYTX01;s__ | 87.31 | 0.0 | 63.0 | 13,223 | 2,836,697 |
| MAG01430 | GNS1_bin.30 | d__Bacteria;p__Chloroflexota;c__Limnocylindria;o__Limnocylindrales;f__CSP1-4;g__JACDAV01;s__ | 61.38 | 1.65 | 72.0 | 6,750 | 1,857,121 |
| MAG01431 | GNS1_bin.33 | d__Bacteria;p__Myxococcota;c__Polyangia;o__Fen-1088;f__Fen-1088;g__FEN-1088;s__ | 86.6 | 7.14 | 66.0 | 18,263 | 5,696,476 |
| MAG01432 | GNS1_bin.34 | d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__VadinHA17;g__LD21;s__ | 95.56 | 2.08 | 42.0 | 40,978 | 3,957,247 |
| MAG01433 | GNS1_bin.35 | d__Bacteria;p__Desulfobacterota_B;c__Binatia;o__UBA9968;f__UBA9968;g__DAIRFP01;s__ | 83.45 | 2.74 | 54.0 | 8,198 | 3,843,683 |
| MAG01434 | GNS1_bin.37 | d__Bacteria;p__Eisenbacteria;c__RBG-16-71-46;o__SZUA-252;f__SZUA-252;g__DASQJL01;s__ | 63.59 | 0.06 | 71.0 | 6,152 | 1,689,062 |
| MAG01435 | GNS1_bin.38 | d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Burkholderiales;f__JACQAP01;g__JACQAP01;s__ | 100.0 | 7.08 | 61.0 | 12,820 | 4,961,785 |
| MAG01436 | GNS1_bin.40 | d__Bacteria;p__Acidobacteriota;c__Blastocatellia;o__Pyrinomonadales;f__Pyrinomonadaceae;g__UBA11740;s__UBA11740 sp041497335 | 68.29 | 1.21 | 56.0 | 6,204 | 3,178,247 |
| MAG01437 | GNS1_bin.41 | d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__Gemmatimonadales;f__Gemmatimonadaceae;g__UBA4720;s__ | 79.38 | 3.21 | 63.0 | 9,937 | 2,541,507 |
| MAG01438 | GNS1_bin.42 | d__Archaea;p__Thermoproteota;c__Bathyarchaeia;o__Bathyarchaeales;f__Bathycorpusculaceae;g__Bathycorpusculum;s__ | 68.58 | 0.71 | 45.0 | 6,120 | 1,161,964 |
| MAG01439 | GNS1_bin.43 | d__Bacteria;p__Pseudomonadota;c__Alphaproteobacteria;o__Rhizobiales;f__Kaistiaceae;g__DASZQY01;s__ | 86.6 | 3.23 | 63.0 | 10,843 | 2,845,488 |
| MAG01440 | GNS1_bin.44 | d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Burkholderiales;f__Usitatibacteraceae;g__Usitatibacter;s__ | 92.23 | 0.56 | 68.0 | 20,824 | 3,406,529 |
| MAG01441 | GNS1_bin.47 | d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Burkholderiales;f__SG8-39;g__SCGC-AG-212-J23;s__ | 65.03 | 0.42 | 66.0 | 6,949 | 2,383,748 |
| MAG01442 | GNS1_bin.5 | d__Bacteria;p__Methylomirabilota;c__Methylomirabilia;o__Methylomirabilales;f__2-02-FULL-66-22;g__2-02-FULL-66-22;s__ | 61.51 | 2.22 | 66.0 | 4,304 | 2,465,286 |
| MAG01443 | GNS1_bin.50 | d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__Gemmatimonadales;f__GWC2-71-9;g__20CM-2-65-7;s__20CM-2-65-7 sp041488075 | 61.34 | 0.98 | 70.0 | 8,348 | 1,740,053 |
| MAG01444 | GNS1_bin.51 | d__Bacteria;p__Methylomirabilota;c__Methylomirabilia;o__Methylomirabilales;f__Methylomirabilaceae;g__Methylomirabilis;s__ | 74.63 | 0.47 | 61.0 | 9,107 | 1,405,214 |
| MAG01445 | GNS1_bin.53 | d__Bacteria;p__Acidobacteriota;c__Thermoanaerobaculia;o__UBA5066;f__Gp7-AA6;g__DAHUXD01;s__ | 72.34 | 1.72 | 68.0 | 8,784 | 2,084,014 |
| MAG01446 | GNS1_bin.54 | d__Bacteria;p__Acidobacteriota;c__Thermoanaerobaculia;o__Thermoanaerobaculales;f__Thermoanaerobaculaceae;g__RBG-13-68-16;s__ | 79.89 | 2.38 | 68.0 | 7,999 | 2,004,766 |
| MAG01447 | GNS1_bin.55 | d__Bacteria;p__Chloroflexota;c__Limnocylindria;o__P2-11E;f__P2-11E;g__CF-39;s__CF-39 sp041493915 | 72.56 | 2.63 | 69.0 | 8,968 | 2,352,272 |
| MAG01448 | GNS1_bin.56 | d__Bacteria;p__Acidobacteriota;c__Thermoanaerobaculia;o__UBA5066;f__Gp7-AA6;g__DAHUXD01;s__ | 82.14 | 1.29 | 69.0 | 20,375 | 2,590,338 |
| MAG01449 | GNS1_bin.6 | d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__Gemmatimonadales;f__GWC2-71-9;g__20CM-2-65-7;s__ | 70.88 | 2.48 | 70.0 | 12,387 | 2,194,258 |
| MAG01450 | GNS1_bin.7 | d__Bacteria;p__Myxococcota;c__Polyangia;o__Haliangiales;f__SHYZ01;g__DATFWE01;s__ | 81.47 | 0.22 | 71.0 | 10,589 | 5,295,215 |
| MAG01451 | GNS1_bin.8 | d__Bacteria;p__Methylomirabilota;c__Methylomirabilia;o__Rokubacteriales;f__CSP1-6;g__DASRWT01;s__ | 56.45 | 1.16 | 70.0 | 7,491 | 2,540,565 |
| MAG01452 | GNS1_bin.9 | d__Bacteria;p__Chloroflexota;c__Anaerolineae;o__Anaerolineales;f__E44-bin32;g__MGOM01;s__ | 93.34 | 3.74 | 67.0 | 22,077 | 2,911,386 |
| ID | Name | Taxonomy | Completeness | Contamination | GC | N50 | Size |