GWM
Global Wetland Microbiome Database
Overview
| ID | SMP0038 |
|---|---|
| Name | GNS2 |
| Type | marsh |
| Habitat | soil |
| Country | China |
| Latitude and longitude | 33.648611 N 101.889444 E |
| Altitude (m) | 3487.0 |
| Instrument | illumina NovaSeq X Plus |
| AvgSpotLen (bp) | 300 |
| LibraryLayout | PAIRED |
| Project | PRJNA1430164 |
| Collection Date | 2022-11-11 |
| Physicochemical properties | |
| TN (g/kg) | 10.5050 |
| TP (g/kg) | 1.2372 |
| TS (g/kg) | 1.0226 |
| TC (g/kg) | 169.1100 |
| Fe (mg/kg) | 34320.6522 |
| Mn (mg/kg) | 521.7391 |
| C/N | 16.0980 |
| IC (g/kg) | 136.3403 |
| MBC (g/kg) | 0.4798 |
| pH | 5.6000 |
| Water content (%) | 0.7371 |
| NO3- (mg/kg) | 47.0862 |
| NH4+ (mg/kg) | 21.5720 |
Location
Community profile
The microbial community profiled by MetaPhlAn4
MAGs25
The MAGs in SMP0038
| ID | Name | Taxonomy | Completeness | Contamination | GC | N50 | Size |
|---|---|---|---|---|---|---|---|
| MAG01453 | GNS2_bin.1 | d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Burkholderiales;f__Usitatibacteraceae;g__Usitatibacter;s__ | 91.54 | 4.79 | 67.0 | 15,194 | 3,576,258 |
| MAG01454 | GNS2_bin.14 | d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__GCA-2729495;f__GCA-2729495;g__;s__ | 93.22 | 0.18 | 64.0 | 16,370 | 2,355,079 |
| MAG01455 | GNS2_bin.17 | d__Bacteria;p__Methylomirabilota;c__Methylomirabilia;o__Methylomirabilales;f__2-02-FULL-66-22;g__2-02-FULL-66-22;s__ | 100.0 | 5.07 | 64.0 | 26,320 | 5,293,897 |
| MAG01456 | GNS2_bin.19 | d__Bacteria;p__Patescibacteriota;c__Patescibacteriia;o__Magasanikbacterales;f__GWA2-37-8;g__XYD2-FULL-39-9;s__ | 98.01 | 0.21 | 38.0 | 32,538 | 1,172,808 |
| MAG01457 | GNS2_bin.2 | d__Bacteria;p__Chloroflexota;c__Anaerolineae;o__Anaerolineales;f__Anaerolineaceae;g__Anaerolinea;s__ | 71.34 | 3.44 | 58.0 | 4,389 | 4,614,071 |
| MAG01458 | GNS2_bin.20 | d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__Gemmatimonadales;f__GWC2-71-9;g__DASTHG01;s__ | 99.46 | 0.4 | 67.0 | 25,012 | 3,316,314 |
| MAG01459 | GNS2_bin.22 | d__Bacteria;p__Chloroflexota;c__Anaerolineae;o__Anaerolineales;f__UBA6663;g__;s__ | 96.64 | 9.02 | 64.0 | 41,177 | 7,607,848 |
| MAG01460 | GNS2_bin.23 | d__Bacteria;p__Actinomycetota;c__Thermoleophilia;o__Solirubrobacterales;f__70-9;g__VAYN01;s__ | 85.12 | 2.43 | 70.0 | 11,364 | 1,998,303 |
| MAG01461 | GNS2_bin.27 | d__Bacteria;p__Acidobacteriota;c__Blastocatellia;o__Pyrinomonadales;f__Pyrinomonadaceae;g__;s__ | 61.06 | 0.16 | 57.0 | 6,640 | 1,951,231 |
| MAG01462 | GNS2_bin.28 | d__Bacteria;p__Myxococcota;c__Polyangia;o__Haliangiales;f__SHYZ01;g__DATFWE01;s__ | 76.77 | 1.57 | 71.0 | 8,943 | 5,149,706 |
| MAG01463 | GNS2_bin.3 | d__Bacteria;p__Planctomycetota;c__Phycisphaerae;o__UBA1845;f__UBA1845;g__SBAX01;s__ | 92.34 | 1.57 | 59.0 | 10,927 | 4,274,584 |
| MAG01464 | GNS2_bin.30 | d__Bacteria;p__Actinomycetota;c__Acidimicrobiia;o__Acidimicrobiales;f__Ilumatobacteraceae;g__JBDUDK01;s__ | 84.59 | 5.5 | 66.0 | 8,629 | 3,948,721 |
| MAG01465 | GNS2_bin.31 | d__Bacteria;p__Myxococcota;c__Polyangia;o__Polyangiales;f__Polyangiaceae;g__;s__ | 77.84 | 2.58 | 65.0 | 7,748 | 6,841,763 |
| MAG01466 | GNS2_bin.32 | d__Bacteria;p__Pseudomonadota;c__Alphaproteobacteria;o__Dongiales;f__Dongiaceae;g__DASXQK01;s__ | 72.78 | 2.24 | 65.0 | 6,023 | 2,503,533 |
| MAG01467 | GNS2_bin.33 | d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__Gemmatimonadales;f__JACORV01;g__DASXPG01;s__ | 86.44 | 0.1 | 70.0 | 16,334 | 2,632,684 |
| MAG01468 | GNS2_bin.35 | d__Bacteria;p__Acidobacteriota;c__Vicinamibacteria;o__Fen-336;f__Fen-336;g__DAINRN01;s__ | 76.29 | 1.36 | 71.0 | 8,292 | 2,929,813 |
| MAG01469 | GNS2_bin.36 | d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__Gemmatimonadales;f__GWC2-71-9;g__DASTHG01;s__ | 87.63 | 0.79 | 68.0 | 25,931 | 3,170,011 |
| MAG01470 | GNS2_bin.37 | d__Bacteria;p__Methylomirabilota;c__Methylomirabilia;o__Methylomirabilales;f__2-02-FULL-66-22;g__2-02-FULL-66-22;s__ | 88.21 | 5.07 | 65.0 | 6,727 | 3,875,571 |
| MAG01471 | GNS2_bin.39 | d__Bacteria;p__Bacteroidota_A;c__UBA10030;o__UBA10030;f__UBA6906;g__Fen-1273;s__ | 66.7 | 1.81 | 62.0 | 4,732 | 2,659,468 |
| MAG01472 | GNS2_bin.4 | d__Bacteria;p__Methylomirabilota;c__Methylomirabilia;o__Rokubacteriales;f__CSP1-6;g__CAMLFJ01;s__ | 64.99 | 2.92 | 72.0 | 5,985 | 3,187,251 |
| MAG01473 | GNS2_bin.40 | d__Bacteria;p__Actinomycetota;c__Acidimicrobiia;o__Acidimicrobiales;f__Ilumatobacteraceae;g__JAENVT01;s__JAENVT01 sp036262105 | 67.84 | 2.9 | 65.0 | 2,583 | 2,797,667 |
| MAG01474 | GNS2_bin.41 | d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Schlegelella_A;s__ | 63.63 | 0.27 | 69.0 | 6,261 | 3,146,681 |
| MAG01475 | GNS2_bin.5 | d__Bacteria;p__Desulfobacterota;c__Syntrophia;o__Syntrophales;f__UBA2192;g__UBA2192;s__ | 68.02 | 1.68 | 60.0 | 3,837 | 1,621,573 |
| MAG01476 | GNS2_bin.7 | d__Bacteria;p__Pseudomonadota;c__Alphaproteobacteria;o__Rhizobiales;f__Xanthobacteraceae;g__DATNNN01;s__ | 76.86 | 5.32 | 68.0 | 8,423 | 1,624,288 |
| MAG01477 | GNS2_bin.9 | d__Bacteria;p__Acidobacteriota;c__Terriglobia;o__Acidiferrales;f__UBA7541;g__JBGQGH01;s__ | 69.39 | 2.39 | 61.0 | 5,228 | 2,315,073 |
| ID | Name | Taxonomy | Completeness | Contamination | GC | N50 | Size |