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Overview

ID SMP0054
Name LYD3
Type paddy
Habitat soil
Country China
Latitude and longitude 42.9756 N 125.4875 E
Altitude (m) 368.0
Instrument illumina NovaSeq X Plus
AvgSpotLen (bp) 300
LibraryLayout PAIRED
Project PRJNA1430164
Collection Date 2022-10-14
Physicochemical properties
TN (g/kg) 2.2174
TP (g/kg) 0.6804
TS (g/kg) 0.4553
TC (g/kg) 28.8200
Fe (mg/kg) 26785.8439
Mn (mg/kg) 414.7005
C/N 12.9975
IC (g/kg) 4.7604
MBC (g/kg) 0.1144
pH 5.8000
Water content (%) 0.3098
NO3- (mg/kg) 0.4660
NH4+ (mg/kg) 2.4570

Location

Community profile
The microbial community profiled by MetaPhlAn4

MAGs8
The MAGs in SMP0054

ID Name Taxonomy Completeness Contamination GCN50Size
MAG02048 LYD3_bin.1 d__Bacteria;p__Acidobacteriota;c__Blastocatellia;o__Pyrinomonadales;f__Pyrinomonadaceae;g__OLB17;s__ 69.7 2.66 55.0 3,369 1,844,280
MAG02049 LYD3_bin.13 d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Pseudomonadales;f__Moraxellaceae;g__JAQSDB01;s__ 95.39 0.99 59.0 24,929 2,809,718
MAG02050 LYD3_bin.14 d__Bacteria;p__Nitrospirota;c__Thermodesulfovibrionia;o__Thermodesulfovibrionales;f__UBA6898;g__Sulfobium;s__ 92.03 3.38 51.0 6,853 2,538,470
MAG02051 LYD3_bin.4 d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Chitinophagales;f__Chitinophagaceae;g__JJ008;s__ 76.86 4.15 42.0 5,803 3,157,309
MAG02052 LYD3_bin.5 d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Burkholderiales;f__Casimicrobiaceae;g__CAIWHR01;s__ 67.42 3.2 68.0 5,561 2,768,317
MAG02053 LYD3_bin.7 d__Bacteria;p__Bacteroidota_A;c__UBA10030;o__UBA10030;f__UBA6906;g__;s__ 61.38 1.65 59.0 5,059 2,097,912
MAG02054 LYD3_bin.8 d__Bacteria;p__Myxococcota;c__Polyangia;o__Fen-1088;f__Fen-1088;g__Fen-1118;s__ 78.03 4.53 68.0 6,418 5,211,090
MAG02055 LYD3_bin.9 d__Archaea;p__Thermoproteota;c__Bathyarchaeia;o__Bathyarchaeales;f__Bathycorpusculaceae;g__Bathycorpusculum;s__ 78.08 4.61 45.0 7,069 1,190,171
ID Name Taxonomy Completeness Contamination GCN50Size