GWM
Global Wetland Microbiome Database
Overview
| ID | SMP0061 |
|---|---|
| Name | MMGS1 |
| Type | marsh |
| Habitat | soil |
| Country | China |
| Latitude and longitude | 45.941667 N 123.625833 E |
| Altitude (m) | 135.0 |
| Instrument | illumina NovaSeq X Plus |
| AvgSpotLen (bp) | 300 |
| LibraryLayout | PAIRED |
| Project | PRJNA1430164 |
| Collection Date | 2022-10-11 |
| Physicochemical properties | |
| TN (g/kg) | 0.6025 |
| TP (g/kg) | 0.2396 |
| TS (g/kg) | 0.1178 |
| TC (g/kg) | 10.9000 |
| Fe (mg/kg) | 21496.2963 |
| Mn (mg/kg) | 514.8148 |
| C/N | 18.0910 |
| IC (g/kg) | 8.6691 |
| MBC (g/kg) | 0.2088 |
| pH | 9.7400 |
| Water content (%) | 0.2024 |
| NO3- (mg/kg) | -1.3966 |
| NH4+ (mg/kg) | 9.7365 |
Location
Community profile
The microbial community profiled by MetaPhlAn4
MAGs51
The MAGs in SMP0061
| ID | Name | Taxonomy | Completeness | Contamination | GC | N50 | Size |
|---|---|---|---|---|---|---|---|
| MAG02398 | MMGS1_bin.1 | d__Bacteria;p__Verrucomicrobiota;c__Verrucomicrobiia;o__Limisphaerales;f__JAHDYP01;g__JAHDYP01;s__ | 57.43 | 0.38 | 62.0 | 6,212 | 2,839,643 |
| MAG02399 | MMGS1_bin.10 | d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__UBA7960;g__UBA7960;s__ | 74.7 | 1.8 | 49.0 | 9,557 | 2,171,997 |
| MAG02400 | MMGS1_bin.11 | d__Bacteria;p__Verrucomicrobiota;c__Verrucomicrobiia;o__Limisphaerales;f__JAHDYP01;g__JAHDYP01;s__ | 97.83 | 3.82 | 62.0 | 26,246 | 4,906,755 |
| MAG02401 | MMGS1_bin.12 | d__Bacteria;p__Actinomycetota;c__Nitriliruptoria;o__Euzebyales;f__JAHELV01;g__JAHELV01;s__ | 86.46 | 3.41 | 71.0 | 23,987 | 3,877,882 |
| MAG02402 | MMGS1_bin.16 | d__Bacteria;p__Acidobacteriota;c__Thermoanaerobaculia;o__Multivoradales;f__JAIOJS01;g__;s__ | 97.79 | 0.15 | 70.0 | 86,777 | 4,679,564 |
| MAG02403 | MMGS1_bin.17 | d__Bacteria;p__Actinomycetota;c__Actinomycetes;o__Jiangellales;f__Jiangellaceae;g__JASLBX01;s__ | 91.94 | 4.28 | 70.0 | 26,023 | 4,178,625 |
| MAG02404 | MMGS1_bin.18 | d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Pseudomonadales;f__Moraxellaceae;g__Perlucidibaca;s__Perlucidibaca sp030680295 | 100.0 | 0.11 | 49.0 | 109,867 | 2,284,596 |
| MAG02405 | MMGS1_bin.2 | d__Bacteria;p__Actinomycetota;c__Actinomycetes;o__Jiangellales;f__Jiangellaceae;g__JASLBX01;s__ | 89.45 | 5.31 | 70.0 | 28,152 | 3,793,603 |
| MAG02406 | MMGS1_bin.20 | d__Bacteria;p__Desulfobacterota_B;c__Binatia;o__UBA9968;f__UBA9968;g__DP-20;s__ | 91.21 | 5.38 | 59.0 | 6,579 | 3,762,003 |
| MAG02407 | MMGS1_bin.22 | d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__;s__ | 74.98 | 0.4 | 65.0 | 3,923 | 1,775,844 |
| MAG02408 | MMGS1_bin.23 | d__Bacteria;p__Desulfobacterota_B;c__Binatia;o__UBA9968;f__UBA9968;g__DASTOD01;s__ | 97.21 | 7.1 | 56.0 | 47,878 | 5,776,470 |
| MAG02409 | MMGS1_bin.24 | d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__XN24;f__XN24;g__XN24;s__ | 88.76 | 1.82 | 68.0 | 14,369 | 2,733,064 |
| MAG02410 | MMGS1_bin.25 | d__Bacteria;p__Acidobacteriota;c__UBA6911;o__RPQK01;f__;g__;s__ | 99.17 | 0.35 | 63.0 | 22,461 | 4,212,594 |
| MAG02411 | MMGS1_bin.28 | d__Bacteria;p__Acidobacteriota;c__Vicinamibacteria;o__Vicinamibacterales;f__2-12-FULL-66-21;g__;s__ | 97.72 | 1.28 | 67.0 | 25,072 | 5,810,070 |
| MAG02412 | MMGS1_bin.3 | d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Pseudomonadales;f__Alcanivoracaceae;g__PGZG01;s__ | 88.94 | 6.42 | 60.0 | 4,530 | 2,432,937 |
| MAG02413 | MMGS1_bin.30 | d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__Palauibacterales;f__Palauibacteraceae;g__;s__ | 61.02 | 0.11 | 70.0 | 9,929 | 1,776,193 |
| MAG02414 | MMGS1_bin.31 | d__Bacteria;p__Nitrospirota;c__Nitrospiria;o__Nitrospirales;f__UBA8639;g__Nitrospira_E;s__ | 78.22 | 1.77 | 51.0 | 4,160 | 3,378,377 |
| MAG02415 | MMGS1_bin.32 | d__Bacteria;p__Bacteroidota_A;c__Rhodothermia;o__Rhodothermales;f__DASSAV01;g__;s__ | 93.68 | 0.68 | 62.0 | 27,897 | 4,506,385 |
| MAG02416 | MMGS1_bin.33 | d__Bacteria;p__Bacteroidota_A;c__Rhodothermia;o__Balneolales;f__Cyclonatronaceae;g__RECM01;s__ | 94.53 | 2.52 | 49.0 | 7,411 | 4,665,385 |
| MAG02417 | MMGS1_bin.34 | d__Bacteria;p__Acidobacteriota;c__UBA6911;o__RPQK01;f__JAPXNP01;g__DATKAT01;s__ | 90.23 | 0.98 | 59.0 | 9,677 | 3,924,664 |
| MAG02418 | MMGS1_bin.35 | d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__Longimicrobiales;f__UBA6960;g__;s__ | 81.38 | 4.01 | 71.0 | 21,222 | 3,383,251 |
| MAG02419 | MMGS1_bin.36 | d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Ectothiorhodospirales;f__Ectothiorhodospiraceae;g__Thioalkalivibrio;s__ | 67.47 | 1.56 | 68.0 | 4,398 | 2,395,022 |
| MAG02420 | MMGS1_bin.37 | d__Bacteria;p__Desulfobacterota;c__Desulfobacteria;o__Desulfobacterales;f__Desulfobacteraceae;g__Desulfotignum;s__Desulfotignum sp035464035 | 90.27 | 7.83 | 56.0 | 6,161 | 3,295,404 |
| MAG02421 | MMGS1_bin.38 | d__Bacteria;p__Actinomycetota;c__Thermoleophilia;o__Solirubrobacterales;f__70-9;g__DASPWW01;s__ | 97.36 | 8.72 | 71.0 | 21,350 | 4,232,597 |
| MAG02422 | MMGS1_bin.4 | d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__Longimicrobiales;f__RSA9;g__SH-MAG3;s__ | 87.55 | 2.38 | 69.0 | 27,128 | 2,977,586 |
| MAG02423 | MMGS1_bin.42 | d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__Longimicrobiales;f__RSA9;g__SLCC01;s__ | 88.61 | 3.5 | 70.0 | 15,327 | 3,385,966 |
| MAG02424 | MMGS1_bin.43 | d__Bacteria;p__Actinomycetota;c__Acidimicrobiia;o__UBA5794;f__UBA11373;g__DATKBG01;s__ | 76.05 | 2.05 | 70.0 | 10,582 | 2,105,651 |
| MAG02425 | MMGS1_bin.45 | d__Bacteria;p__Chloroflexota;c__Anaerolineae;o__Anaerolineales;f__Villigracilaceae;g__UBA8950;s__ | 87.71 | 7.26 | 57.0 | 3,501 | 3,194,304 |
| MAG02426 | MMGS1_bin.47 | d__Bacteria;p__Planctomycetota;c__Phycisphaerae;o__Phycisphaerales;f__SM1A02;g__DAOMNO01;s__ | 68.16 | 0.86 | 65.0 | 5,460 | 2,084,186 |
| MAG02427 | MMGS1_bin.48 | d__Bacteria;p__Acidobacteriota;c__Thermoanaerobaculia;o__Multivoradales;f__;g__;s__ | 62.95 | 0.11 | 71.0 | 8,850 | 2,244,859 |
| MAG02428 | MMGS1_bin.49 | d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__Longimicrobiales;f__UBA6960;g__;s__ | 85.08 | 4.33 | 71.0 | 4,105 | 2,446,861 |
| MAG02429 | MMGS1_bin.52 | d__Bacteria;p__Actinomycetota;c__Acidimicrobiia;o__UBA5794;f__ZC4RG35;g__JANQRA01;s__ | 88.28 | 0.01 | 64.0 | 30,159 | 2,772,315 |
| MAG02430 | MMGS1_bin.56 | d__Bacteria;p__Pseudomonadota;c__Alphaproteobacteria;o__Rhizobiales;f__Afifellaceae;g__;s__ | 61.7 | 0.59 | 69.0 | 6,057 | 2,060,381 |
| MAG02431 | MMGS1_bin.57 | d__Bacteria;p__Actinomycetota;c__Thermoleophilia;o__Solirubrobacterales;f__70-9;g__DATHVI01;s__ | 67.72 | 1.67 | 71.0 | 18,609 | 2,029,646 |
| MAG02432 | MMGS1_bin.59 | d__Bacteria;p__Acidobacteriota;c__Blastocatellia;o__Pyrinomonadales;f__Pyrinomonadaceae;g__PSRF01;s__ | 90.02 | 1.67 | 51.0 | 8,497 | 4,709,700 |
| MAG02433 | MMGS1_bin.6 | d__Bacteria;p__Actinomycetota;c__CADDZG01;o__CADDZG01;f__WHSQ01;g__DATLFS01;s__ | 92.66 | 0.42 | 67.0 | 21,861 | 2,521,751 |
| MAG02434 | MMGS1_bin.61 | d__Bacteria;p__Actinomycetota;c__Thermoleophilia;o__Solirubrobacterales;f__70-9;g__DATHVI01;s__ | 88.6 | 2.82 | 71.0 | 10,660 | 2,003,636 |
| MAG02435 | MMGS1_bin.62 | d__Bacteria;p__Planctomycetota;c__Planctomycetia;o__Pirellulales;f__Pirellulaceae;g__SLMF01;s__ | 87.73 | 4.54 | 64.0 | 5,666 | 8,486,503 |
| MAG02436 | MMGS1_bin.63 | d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Competibacterales;f__Competibacteraceae;g__;s__ | 70.43 | 3.16 | 57.0 | 2,111 | 2,160,304 |
| MAG02437 | MMGS1_bin.65 | d__Bacteria;p__Actinomycetota;c__UBA4738;o__UBA4738;f__HRBIN12;g__CALGFI01;s__CALGFI01 sp035461565 | 79.07 | 1.35 | 71.0 | 10,180 | 2,171,555 |
| MAG02438 | MMGS1_bin.66 | d__Bacteria;p__Desulfobacterota;c__Desulfuromonadia;o__Desulfuromonadales;f__;g__;s__ | 76.02 | 1.76 | 58.0 | 4,652 | 2,668,378 |
| MAG02439 | MMGS1_bin.68 | d__Bacteria;p__Acidobacteriota;c__UBA6911;o__RPQK01;f__JAPXNP01;g__;s__ | 85.11 | 2.55 | 64.0 | 6,288 | 4,645,322 |
| MAG02440 | MMGS1_bin.69 | d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__Gemmatimonadales;f__Gemmatimonadaceae;g__DASSNU01;s__ | 66.93 | 0.54 | 66.0 | 39,457 | 2,255,451 |
| MAG02441 | MMGS1_bin.7 | d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Chitinophagales;f__Chitinophagaceae;g__JJ008;s__ | 59.84 | 0.46 | 54.0 | 2,590 | 1,973,200 |
| MAG02442 | MMGS1_bin.70 | d__Archaea;p__Thermoproteota;c__Nitrososphaeria;o__Nitrososphaerales;f__Nitrososphaeraceae;g__Nitrososphaera;s__ | 95.21 | 0.69 | 43.0 | 15,931 | 2,536,281 |
| MAG02443 | MMGS1_bin.72 | d__Bacteria;p__Actinomycetota;c__Acidimicrobiia;o__Acidimicrobiales;f__JACDCH01;g__;s__ | 95.64 | 4.2 | 67.0 | 36,073 | 4,000,804 |
| MAG02444 | MMGS1_bin.73 | d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Prolixibacteraceae;g__Draconibacterium;s__ | 68.34 | 2.1 | 41.0 | 2,072 | 3,334,069 |
| MAG02445 | MMGS1_bin.74 | d__Bacteria;p__Methylomirabilota;c__Methylomirabilia;o__Rokubacteriales;f__CSP1-6;g__;s__ | 91.54 | 6.41 | 72.0 | 10,187 | 5,104,998 |
| MAG02446 | MMGS1_bin.75 | d__Bacteria;p__Actinomycetota;c__Acidimicrobiia;o__UBA5794;f__ZC4RG35;g__ZC4RG35;s__ | 86.94 | 3.17 | 66.0 | 12,104 | 2,028,738 |
| MAG02447 | MMGS1_bin.8 | d__Bacteria;p__Acidobacteriota;c__Vicinamibacteria;o__Vicinamibacterales;f__UBA2999;g__JAUXWO01;s__ | 91.55 | 1.81 | 70.0 | 19,675 | 4,175,315 |
| MAG02448 | MMGS1_bin.9 | d__Bacteria;p__Acidobacteriota;c__Vicinamibacteria;o__Vicinamibacterales;f__UBA2999;g__DASPWV01;s__ | 91.99 | 1.65 | 69.0 | 31,618 | 5,125,309 |
| ID | Name | Taxonomy | Completeness | Contamination | GC | N50 | Size |