GWM
Global Wetland Microbiome Database
Overview
| ID | SMP0074 |
|---|---|
| Name | PYH2 |
| Type | lake |
| Habitat | sediment |
| Country | China |
| Latitude and longitude | 29.147778 N 116.6725 E |
| Altitude (m) | 19.0 |
| Instrument | illumina NovaSeq X Plus |
| AvgSpotLen (bp) | 300 |
| LibraryLayout | PAIRED |
| Project | PRJNA1430164 |
| Collection Date | |
| Physicochemical properties | |
| TN (g/kg) | 2.1890 |
| TP (g/kg) | 0.7152 |
| TS (g/kg) | 0.1897 |
| TC (g/kg) | 15.5700 |
| Fe (mg/kg) | 39162.1622 |
| Mn (mg/kg) | 847.4903 |
| C/N | 7.1128 |
| IC (g/kg) | 1.4754 |
| MBC (g/kg) | 2.3672 |
| pH | 6.0100 |
| Water content (%) | 0.6731 |
| NO3- (mg/kg) | -17.1672 |
| NH4+ (mg/kg) | 23.6360 |
Location
Community profile
The microbial community profiled by MetaPhlAn4
MAGs38
The MAGs in SMP0074
| ID | Name | Taxonomy | Completeness | Contamination | GC | N50 | Size |
|---|---|---|---|---|---|---|---|
| MAG03173 | PYH2_bin.10 | d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__JAKOQB01;s__ | 95.72 | 1.99 | 64.0 | 15,046 | 4,005,202 |
| MAG03174 | PYH2_bin.13 | d__Bacteria;p__Acidobacteriota;c__Aminicenantia;o__Aminicenantales;f__RBG-16-66-30;g__DATKJS01;s__ | 60.26 | 1.43 | 67.0 | 6,605 | 2,152,150 |
| MAG03175 | PYH2_bin.15 | d__Bacteria;p__Nitrospirota;c__UBA9217;o__UBA9217;f__UBA9217;g__JAAXXJ01;s__ | 69.46 | 2.01 | 60.0 | 5,635 | 1,861,367 |
| MAG03176 | PYH2_bin.16 | d__Bacteria;p__Acidobacteriota;c__UBA6911;o__UBA6911;f__UBA6911;g__;s__ | 86.07 | 0.02 | 62.0 | 20,252 | 4,751,271 |
| MAG03177 | PYH2_bin.17 | d__Bacteria;p__Chloroflexota;c__Anaerolineae;o__Fen-1058;f__Fen-1058;g__JBGQGR01;s__ | 90.99 | 2.06 | 54.0 | 7,330 | 3,231,442 |
| MAG03178 | PYH2_bin.18 | d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Burkholderiales;f__SG8-39;g__2-02-FULL-66-14;s__ | 84.39 | 1.94 | 68.0 | 5,803 | 2,693,583 |
| MAG03179 | PYH2_bin.19 | d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Pseudomonadales;f__Azotimanducaceae;g__DATJGR01;s__ | 86.07 | 2.82 | 66.0 | 3,937 | 3,044,996 |
| MAG03180 | PYH2_bin.21 | d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__JAKOQB01;s__ | 98.88 | 0.18 | 64.0 | 18,342 | 4,189,197 |
| MAG03181 | PYH2_bin.24 | d__Bacteria;p__Chloroflexota;c__Dehalococcoidia;o__Dehalococcoidales;f__JAFGLR01;g__JAFGLR01;s__ | 80.62 | 3.1 | 50.0 | 4,236 | 1,606,445 |
| MAG03182 | PYH2_bin.25 | d__Bacteria;p__Acidobacteriota;c__Blastocatellia;o__UBA7656;f__UBA7656;g__JADGNW01;s__ | 99.3 | 0.16 | 58.0 | 33,908 | 6,178,522 |
| MAG03183 | PYH2_bin.26 | d__Bacteria;p__Nitrospirota;c__Nitrospiria;o__Nitrospirales;f__Nitrospiraceae;g__2-02-FULL-62-14;s__ | 88.11 | 3.52 | 63.0 | 18,889 | 2,347,568 |
| MAG03184 | PYH2_bin.28 | d__Bacteria;p__Chloroflexota;c__Anaerolineae;o__UBA4142;f__UBA4142;g__;s__ | 93.87 | 7.49 | 55.0 | 14,551 | 5,243,222 |
| MAG03185 | PYH2_bin.29 | d__Bacteria;p__Bacteroidota_A;c__Ignavibacteria;o__SJA-28;f__OLB5;g__;s__ | 82.26 | 0.12 | 45.0 | 5,273 | 2,000,320 |
| MAG03186 | PYH2_bin.30 | d__Bacteria;p__Campylobacterota;c__Campylobacteria;o__Campylobacterales;f__Sulfurimonadaceae;g__Sulfuricurvum;s__ | 78.36 | 0.4 | 45.0 | 9,524 | 1,577,129 |
| MAG03187 | PYH2_bin.31 | d__Archaea;p__Thermoplasmatota;c__Thermoplasmata;o__JAUWGG01;f__;g__;s__ | 83.9 | 2.16 | 60.0 | 9,572 | 1,715,961 |
| MAG03188 | PYH2_bin.38 | d__Archaea;p__Thermoproteota;c__Bathyarchaeia;o__40CM-2-53-6;f__40CM-2-53-6;g__;s__ | 86.91 | 5.97 | 53.0 | 13,350 | 2,042,452 |
| MAG03189 | PYH2_bin.39 | d__Archaea;p__Halobacteriota;c__Methanomicrobia;o__Methanomicrobiales;f__Methanospirillaceae;g__UBA9949;s__ | 94.94 | 0.16 | 55.0 | 43,013 | 1,567,080 |
| MAG03190 | PYH2_bin.40 | d__Bacteria;p__Chloroflexota;c__Anaerolineae;o__Fen-1058;f__Fen-1058;g__;s__ | 92.45 | 3.48 | 64.0 | 10,863 | 4,234,452 |
| MAG03191 | PYH2_bin.41 | d__Bacteria;p__Nitrospirota;c__Thermodesulfovibrionia;o__Thermodesulfovibrionales;f__UBA6898;g__;s__ | 94.44 | 0.56 | 59.0 | 9,331 | 2,075,527 |
| MAG03192 | PYH2_bin.42 | d__Bacteria;p__Acidobacteriota;c__Aminicenantia;o__Aminicenantales;f__RBG-16-66-30;g__RBG-16-66-30;s__ | 85.11 | 4.46 | 66.0 | 5,773 | 2,161,876 |
| MAG03193 | PYH2_bin.44 | d__Bacteria;p__Desulfobacterota;c__WTBG01;o__WTBG01;f__WTBG01;g__CALJBY01;s__ | 88.0 | 3.79 | 53.0 | 8,421 | 2,741,925 |
| MAG03194 | PYH2_bin.46 | d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Burkholderiales;f__UBA6910;g__UBA6910;s__ | 59.56 | 1.77 | 69.0 | 3,344 | 1,762,628 |
| MAG03195 | PYH2_bin.47 | d__Bacteria;p__WOR-3;c__WOR-3;o__SM23-42;f__;g__;s__ | 73.18 | 1.76 | 57.0 | 5,421 | 1,248,654 |
| MAG03196 | PYH2_bin.48 | d__Bacteria;p__Nitrospirota;c__Thermodesulfovibrionia;o__Thermodesulfovibrionales;f__UBA6898;g__UBA6898;s__ | 76.54 | 3.96 | 52.0 | 9,827 | 2,252,407 |
| MAG03197 | PYH2_bin.49 | d__Bacteria;p__Nitrospirota;c__Thermodesulfovibrionia;o__Thermodesulfovibrionales;f__Dissulfurispiraceae;g__;s__ | 89.23 | 0.14 | 54.0 | 5,607 | 2,083,969 |
| MAG03198 | PYH2_bin.53 | d__Bacteria;p__Chloroflexota;c__Anaerolineae;o__Anaerolineales;f__Villigracilaceae;g__JBGPQJ01;s__ | 92.11 | 6.7 | 55.0 | 26,227 | 3,968,714 |
| MAG03199 | PYH2_bin.55 | d__Archaea;p__Halobacteriota;c__Methanomicrobia;o__Methanomicrobiales;f__Methanospirillaceae;g__Methanoregula;s__ | 52.22 | 0.18 | 47.0 | 3,956 | 947,532 |
| MAG03200 | PYH2_bin.57 | d__Archaea;p__Thermoproteota;c__Bathyarchaeia;o__TCS64;f__TCS64;g__UBA8941;s__ | 68.7 | 0.37 | 37.0 | 4,023 | 1,261,819 |
| MAG03201 | PYH2_bin.59 | d__Bacteria;p__Acidobacteriota;c__UBA6911;o__UBA6911;f__UBA6911;g__;s__ | 96.07 | 3.73 | 56.0 | 11,393 | 6,269,870 |
| MAG03202 | PYH2_bin.6 | d__Bacteria;p__Acidobacteriota;c__Thermoanaerobaculia;o__Thermoanaerobaculales;f__Thermoanaerobaculaceae;g__RBG-13-68-16;s__ | 79.05 | 3.34 | 68.0 | 5,361 | 2,235,528 |
| MAG03203 | PYH2_bin.62 | d__Bacteria;p__BMS3Abin14;c__BMS3Abin14;o__BMS3Abin14;f__;g__;s__ | 96.19 | 1.28 | 66.0 | 15,295 | 2,097,789 |
| MAG03204 | PYH2_bin.63 | d__Bacteria;p__Chloroflexota;c__Dehalococcoidia;o__Dehalococcoidales;f__Fen-1064;g__JAURWL01;s__ | 98.94 | 4.81 | 52.0 | 11,393 | 2,406,511 |
| MAG03205 | PYH2_bin.64 | d__Bacteria;p__JAUVQV01;c__JAUVQV01;o__;f__;g__;s__ | 76.75 | 1.42 | 64.0 | 7,679 | 1,873,940 |
| MAG03206 | PYH2_bin.65 | d__Bacteria;p__Methylomirabilota;c__Methylomirabilia;o__Methylomirabilales;f__2-02-FULL-66-22;g__2-02-FULL-66-22;s__ | 76.59 | 2.49 | 65.0 | 7,716 | 3,357,211 |
| MAG03207 | PYH2_bin.66 | d__Bacteria;p__Nitrospirota;c__Thermodesulfovibrionia;o__Thermodesulfovibrionales;f__UBA9159;g__;s__ | 78.15 | 3.74 | 52.0 | 5,762 | 1,514,224 |
| MAG03208 | PYH2_bin.67 | d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__G020354665;s__ | 86.78 | 1.44 | 67.0 | 7,657 | 3,742,354 |
| MAG03209 | PYH2_bin.68 | d__Archaea;p__Thermoplasmatota;c__Thermoplasmata;o__RBG-16-68-12;f__RBG-16-68-12;g__EA-19;s__ | 58.99 | 1.0 | 68.0 | 4,489 | 1,174,126 |
| MAG03210 | PYH2_bin.71 | d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Burkholderiales;f__Sulfuricellaceae;g__Sulfuricella;s__ | 76.33 | 5.01 | 57.0 | 7,469 | 2,335,662 |
| ID | Name | Taxonomy | Completeness | Contamination | GC | N50 | Size |