GWM
Global Wetland Microbiome Database
Overview
| ID | SMP0081 |
|---|---|
| Name | REGS3 |
| Type | marsh |
| Habitat | soil |
| Country | China |
| Latitude and longitude | 33.112 N 102.6116 E |
| Altitude (m) | 3474.0 |
| Instrument | illumina NovaSeq X Plus |
| AvgSpotLen (bp) | 300 |
| LibraryLayout | PAIRED |
| Project | PRJNA1430164 |
| Collection Date | 2023-08-06 |
| Physicochemical properties | |
| TN (g/kg) | 3.0490 |
| TP (g/kg) | 0.7773 |
| TS (g/kg) | 0.3921 |
| TC (g/kg) | 34.8500 |
| Fe (mg/kg) | 27218.3236 |
| Mn (mg/kg) | 367.4464 |
| C/N | 11.4300 |
| IC (g/kg) | 1.3341 |
| MBC (g/kg) | 0.1867 |
| pH | 6.8400 |
| Water content (%) | 0.2752 |
| NO3- (mg/kg) | |
| NH4+ (mg/kg) | 6.8074 |
Location
Community profile
The microbial community profiled by MetaPhlAn4
MAGs18
The MAGs in SMP0081
| ID | Name | Taxonomy | Completeness | Contamination | GC | N50 | Size |
|---|---|---|---|---|---|---|---|
| MAG03344 | REGS3_bin.1 | d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Schlegelella_A;s__ | 59.29 | 0.88 | 71.0 | 5,065 | 2,289,596 |
| MAG03345 | REGS3_bin.11 | d__Bacteria;p__Myxococcota;c__Myxococcia;o__Myxococcales;f__Myxococcaceae;g__RPRB01;s__ | 75.56 | 4.46 | 72.0 | 5,153 | 3,506,317 |
| MAG03346 | REGS3_bin.13 | d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__JAOUJD01;s__ | 93.75 | 1.54 | 67.0 | 17,161 | 3,718,604 |
| MAG03347 | REGS3_bin.15 | d__Bacteria;p__Chloroflexota;c__Anaerolineae;o__Anaerolineales;f__Villigracilaceae;g__Fen-1038;s__ | 62.66 | 1.55 | 61.0 | 5,839 | 2,484,042 |
| MAG03348 | REGS3_bin.16 | d__Bacteria;p__Acidobacteriota;c__Aminicenantia;o__UBA2199;f__UBA2199;g__UBA2199;s__ | 87.28 | 0.36 | 61.0 | 12,749 | 2,419,257 |
| MAG03349 | REGS3_bin.17 | d__Bacteria;p__Acidobacteriota;c__Thermoanaerobaculia;o__UBA5066;f__Gp7-AA6;g__Gp7-AA6;s__ | 77.04 | 3.53 | 67.0 | 2,707 | 1,967,119 |
| MAG03350 | REGS3_bin.19 | d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Burkholderiales;f__Casimicrobiaceae;g__CAIWHR01;s__ | 77.86 | 3.19 | 64.0 | 10,681 | 3,582,434 |
| MAG03351 | REGS3_bin.2 | d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Burkholderiales;f__Casimicrobiaceae;g__CAIWHR01;s__ | 63.49 | 1.56 | 67.0 | 4,689 | 2,578,932 |
| MAG03352 | REGS3_bin.20 | d__Bacteria;p__Acidobacteriota;c__Vicinamibacteria;o__Fen-336;f__Fen-336;g__DATKME01;s__ | 77.8 | 3.31 | 73.0 | 7,808 | 4,254,180 |
| MAG03353 | REGS3_bin.21 | d__Bacteria;p__Acidobacteriota;c__Terriglobia;o__Terriglobales;f__SbA1;g__Sulfotelmatobacter;s__ | 69.71 | 2.34 | 58.0 | 7,860 | 4,364,313 |
| MAG03354 | REGS3_bin.22 | d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Burkholderiales;f__JACQAP01;g__JACQAP01;s__ | 96.56 | 1.37 | 62.0 | 10,556 | 3,593,885 |
| MAG03355 | REGS3_bin.23 | d__Bacteria;p__Acidobacteriota;c__Thermoanaerobaculia;o__Thermoanaerobaculales;f__Thermoanaerobaculaceae;g__;s__ | 87.66 | 0.77 | 72.0 | 8,632 | 3,462,073 |
| MAG03356 | REGS3_bin.24 | d__Bacteria;p__Actinomycetota;c__Acidimicrobiia;o__Acidimicrobiales;f__Ilumatobacteraceae;g__WLMZ01;s__ | 91.37 | 0.1 | 64.0 | 14,122 | 3,352,412 |
| MAG03357 | REGS3_bin.27 | d__Bacteria;p__Myxococcota;c__Polyangia;o__Haliangiales;f__Haliangiaceae;g__JABFXX01;s__ | 90.77 | 4.63 | 68.0 | 16,502 | 7,210,156 |
| MAG03358 | REGS3_bin.29 | d__Bacteria;p__Myxococcota;c__Myxococcia;o__Myxococcales;f__Myxococcaceae;g__JAEUJT01;s__ | 69.53 | 3.61 | 70.0 | 7,475 | 5,648,413 |
| MAG03359 | REGS3_bin.5 | d__Bacteria;p__Acidobacteriota;c__Vicinamibacteria;o__Vicinamibacterales;f__JAFNAJ01;g__JAHDVQ01;s__ | 89.99 | 4.31 | 69.0 | 6,707 | 3,516,233 |
| MAG03360 | REGS3_bin.8 | d__Bacteria;p__Acidobacteriota;c__Thermoanaerobaculia;o__UBA5066;f__Gp7-AA6;g__JALYUA01;s__ | 92.89 | 5.11 | 69.0 | 21,269 | 3,814,707 |
| MAG03361 | REGS3_bin.9 | d__Bacteria;p__Pseudomonadota;c__Alphaproteobacteria;o__Acetobacterales;f__Acetobacteraceae;g__CAIRTN01;s__ | 83.04 | 1.3 | 68.0 | 7,196 | 3,564,688 |
| ID | Name | Taxonomy | Completeness | Contamination | GC | N50 | Size |