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Overview

ID SMP0082
Name SHD1
Type paddy
Habitat soil
Country China
Latitude and longitude 43.4256 N 128.4256 E
Altitude (m) 517.0
Instrument illumina NovaSeq X Plus
AvgSpotLen (bp) 300
LibraryLayout PAIRED
Project PRJNA1430164
Collection Date 2022-10-15
Physicochemical properties
TN (g/kg) 1.7092
TP (g/kg) 0.5922
TS (g/kg) 0.3646
TC (g/kg) 22.4000
Fe (mg/kg) 24973.3607
Mn (mg/kg) 351.4344
C/N 13.1059
IC (g/kg) 2.1427
MBC (g/kg) 0.2109
pH 5.3800
Water content (%) 0.3399
NO3- (mg/kg) 0.6521
NH4+ (mg/kg) 3.6589

Location

Community profile
The microbial community profiled by MetaPhlAn4

MAGs8
The MAGs in SMP0082

ID Name Taxonomy Completeness Contamination GCN50Size
MAG03362 SHD1_bin.1 d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Burkholderiales;f__Gallionellaceae;g__;s__ 79.68 1.91 58.0 13,042 2,056,923
MAG03363 SHD1_bin.16 d__Bacteria;p__Chloroflexota;c__Anaerolineae;o__Anaerolineales;f__Villigracilaceae;g__Defluviilinea;s__ 60.84 1.5 53.0 5,091 3,002,742
MAG03364 SHD1_bin.17 d__Bacteria;p__Acidobacteriota;c__Terriglobia;o__Terriglobales;f__Korobacteraceae;g__DASPLH01;s__ 78.84 5.59 57.0 6,400 3,128,039
MAG03365 SHD1_bin.2 d__Bacteria;p__Eisenbacteria;c__RBG-16-71-46;o__JABDJR01;f__JAWXBZ01;g__;s__ 77.27 3.13 67.0 5,174 2,639,160
MAG03366 SHD1_bin.3 d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Burkholderiales;f__Casimicrobiaceae;g__PALSA-1003;s__ 63.77 0.27 65.0 9,470 1,904,932
MAG03367 SHD1_bin.4 d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__Gemmatimonadales;f__Gemmatimonadaceae;g__UBA4720;s__ 79.28 3.91 59.0 5,516 2,778,216
MAG03368 SHD1_bin.6 d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__Gemmatimonadales;f__Gemmatimonadaceae;g__FEN-1250;s__FEN-1250 sp035310785 84.57 4.48 66.0 7,080 3,267,242
MAG03369 SHD1_bin.7 d__Bacteria;p__Nitrospirota;c__Thermodesulfovibrionia;o__Thermodesulfovibrionales;f__UBA6898;g__Sulfobium;s__ 93.32 2.37 51.0 10,082 2,610,945
ID Name Taxonomy Completeness Contamination GCN50Size