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Overview

ID SMP0084
Name SHD3
Type paddy
Habitat soil
Country China
Latitude and longitude 43.4256 N 128.4256 E
Altitude (m) 517.0
Instrument illumina NovaSeq X Plus
AvgSpotLen (bp) 300
LibraryLayout PAIRED
Project PRJNA1430164
Collection Date 2022-10-15
Physicochemical properties
TN (g/kg) 2.2192
TP (g/kg) 0.6179
TS (g/kg) 0.4629
TC (g/kg) 29.8100
Fe (mg/kg) 26187.3905
Mn (mg/kg) 338.8792
C/N 13.4329
IC (g/kg) 2.0659
MBC (g/kg) 0.2434
pH 5.8800
Water content (%) 0.3652
NO3- (mg/kg) -0.8885
NH4+ (mg/kg) 6.6380

Location

Community profile
The microbial community profiled by MetaPhlAn4

MAGs12
The MAGs in SMP0084

ID Name Taxonomy Completeness Contamination GCN50Size
MAG03385 SHD3_bin.1 d__Bacteria;p__Desulfobacterota;c__Syntrophia;o__Syntrophales;f__UBA2192;g__UBA2192;s__ 93.2 4.48 60.0 15,179 3,016,844
MAG03386 SHD3_bin.10 d__Bacteria;p__Pseudomonadota;c__Alphaproteobacteria;o__Micropepsales;f__Micropepsaceae;g__Rhizomicrobium;s__ 91.54 0.37 61.0 27,240 2,946,901
MAG03387 SHD3_bin.12 d__Bacteria;p__Acidobacteriota;c__Thermoanaerobaculia;o__UBA5066;f__Gp7-AA6;g__JAWOLE01;s__ 64.48 0.55 68.0 8,394 1,955,053
MAG03388 SHD3_bin.13 d__Bacteria;p__Myxococcota;c__Polyangia;o__Polyangiales;f__Polyangiaceae;g__JAFGBI01;s__ 91.48 6.81 66.0 13,328 7,978,799
MAG03389 SHD3_bin.15 d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__Gemmatimonadales;f__Gemmatimonadaceae;g__UBA4720;s__ 81.86 4.09 59.0 5,948 2,937,319
MAG03390 SHD3_bin.16 d__Bacteria;p__Eisenbacteria;c__RBG-16-71-46;o__JABDJR01;f__JAWXBZ01;g__;s__ 85.29 1.66 67.0 5,537 3,656,215
MAG03391 SHD3_bin.17 d__Bacteria;p__Acidobacteriota;c__Thermoanaerobaculia;o__UBA5066;f__Gp7-AA6;g__DAHUXD01;s__ 61.37 2.07 70.0 14,560 2,338,476
MAG03392 SHD3_bin.19 d__Bacteria;p__Nitrospirota;c__Thermodesulfovibrionia;o__Thermodesulfovibrionales;f__UBA6898;g__Sulfobium;s__ 99.98 4.07 51.0 12,456 3,568,334
MAG03393 SHD3_bin.2 d__Bacteria;p__Acidobacteriota;c__Aminicenantia;o__Aminicenantales;f__RBG-16-66-30;g__RBG-16-66-30;s__ 88.1 4.54 67.0 11,337 2,683,284
MAG03394 SHD3_bin.23 d__Bacteria;p__Acidobacteriota;c__Aminicenantia;o__Aminicenantales;f__RBG-16-66-30;g__RBG-16-66-30;s__ 58.95 1.2 66.0 5,097 2,069,536
MAG03395 SHD3_bin.5 d__Bacteria;p__Chloroflexota;c__Limnocylindria;o__Limnocylindrales;f__CSP1-4;g__UBA5189;s__ 86.57 0.7 72.0 14,214 2,113,517
MAG03396 SHD3_bin.6 d__Archaea;p__Halobacteriota;c__Methanomicrobia;o__Methanomicrobiales;f__Methanospirillaceae;g__UBA288;s__ 69.79 1.31 69.0 4,653 1,578,995
ID Name Taxonomy Completeness Contamination GCN50Size