GWM
Global Wetland Microbiome Database
Overview
| ID | SMP0091 |
|---|---|
| Name | SX1 |
| Type | river |
| Habitat | sediment |
| Country | China |
| Latitude and longitude | 30.7722 N 111.1856 E |
| Altitude (m) | 373.0 |
| Instrument | illumina NovaSeq X Plus |
| AvgSpotLen (bp) | 300 |
| LibraryLayout | PAIRED |
| Project | PRJNA1430164 |
| Collection Date | |
| Physicochemical properties | |
| TN (g/kg) | 0.6060 |
| TP (g/kg) | 0.6310 |
| TS (g/kg) | 0.6279 |
| TC (g/kg) | 24.1700 |
| Fe (mg/kg) | 33968.4874 |
| Mn (mg/kg) | 632.3529 |
| C/N | 39.8852 |
| IC (g/kg) | 15.9556 |
| MBC (g/kg) | 0.0939 |
| pH | 7.7400 |
| Water content (%) | 0.3286 |
| NO3- (mg/kg) | 1.5396 |
| NH4+ (mg/kg) | 8.7920 |
Location
Community profile
The microbial community profiled by MetaPhlAn4
MAGs31
The MAGs in SMP0091
| ID | Name | Taxonomy | Completeness | Contamination | GC | N50 | Size |
|---|---|---|---|---|---|---|---|
| MAG03602 | SX1_bin.1 | d__Archaea;p__Hydrothermarchaeota;c__Hydrothermarchaeia;o__Hydrothermarchaeales;f__JAZFTJ01;g__;s__ | 95.95 | 0.53 | 59.0 | 15,725 | 1,305,677 |
| MAG03603 | SX1_bin.10 | d__Bacteria;p__Desulfobacterota_E;c__Deferrimicrobia;o__Deferrimicrobiales;f__Deferrimicrobiaceae;g__;s__ | 85.68 | 2.75 | 68.0 | 6,983 | 1,892,366 |
| MAG03604 | SX1_bin.11 | d__Archaea;p__Asgardarchaeota;c__Lokiarchaeia;o__Sigynarchaeales;f__MK-D1;g__AMARA-1;s__ | 90.39 | 1.69 | 36.0 | 7,378 | 3,036,325 |
| MAG03605 | SX1_bin.14 | d__Bacteria;p__Myxococcota;c__Polyangia;o__DRWM01;f__DRWM01;g__JAFDER01;s__ | 82.82 | 4.09 | 68.0 | 10,653 | 4,529,129 |
| MAG03606 | SX1_bin.19 | d__Bacteria;p__Spirochaetota;c__Spirochaetia;o__SZUA-6;f__Fen-1364;g__;s__ | 74.8 | 3.22 | 65.0 | 28,431 | 3,030,501 |
| MAG03607 | SX1_bin.20 | d__Archaea;p__Thermoplasmatota;c__DTKX01;o__VGTL01;f__VGTL01;g__VGTL01;s__ | 78.72 | 2.84 | 65.0 | 6,986 | 2,771,110 |
| MAG03608 | SX1_bin.25 | d__Archaea;p__Thermoplasmatota;c__Thermoplasmata;o__Methanomassiliicoccales;f__JACIVX01;g__JAJRAG01;s__JAJRAG01 sp028679985 | 91.48 | 1.23 | 55.0 | 9,327 | 1,368,571 |
| MAG03609 | SX1_bin.26 | d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__Gemmatimonadales;f__JACORV01;g__JADGQW01;s__ | 81.56 | 0.91 | 71.0 | 15,520 | 2,938,325 |
| MAG03610 | SX1_bin.28 | d__Bacteria;p__Nitrospirota;c__9FT-COMBO-42-15;o__HDB-SIOI813;f__HDB-SIOI813;g__RBG-16-43-11;s__ | 73.0 | 2.8 | 45.0 | 4,732 | 1,379,569 |
| MAG03611 | SX1_bin.29 | d__Bacteria;p__Desulfobacterota;c__GWC2-55-46;o__GWC2-55-46;f__;g__;s__ | 87.47 | 3.01 | 58.0 | 5,609 | 1,822,295 |
| MAG03612 | SX1_bin.3 | d__Archaea;p__Aenigmatarchaeota;c__Aenigmatarchaeia;o__CG10238-14;f__SCSR01;g__JAPLUY01;s__ | 72.37 | 0.36 | 57.0 | 5,470 | 475,069 |
| MAG03613 | SX1_bin.30 | d__Bacteria;p__Zixibacteria;c__MSB-5A5;o__CAIYYT01;f__CAIYYT01;g__CAIYYT01;s__ | 84.52 | 0.39 | 56.0 | 11,810 | 2,493,850 |
| MAG03614 | SX1_bin.32 | d__Bacteria;p__Caldisericota;c__Caldisericia;o__JAAYUI01;f__JAAYUI01;g__;s__ | 56.78 | 0.56 | 41.0 | 2,783 | 973,345 |
| MAG03615 | SX1_bin.33 | d__Bacteria;p__Chloroflexota;c__Anaerolineae;o__Aggregatilineales;f__UBA3940;g__;s__ | 69.16 | 1.26 | 54.0 | 2,771 | 3,656,838 |
| MAG03616 | SX1_bin.34 | d__Archaea;p__Methanobacteriota_B;c__Thermococci;o__Methanofastidiosales;f__;g__;s__ | 64.27 | 0.02 | 58.0 | 3,093 | 964,431 |
| MAG03617 | SX1_bin.35 | d__Bacteria;p__Pseudomonadota;c__Alphaproteobacteria;o__Rhizobiales;f__Xanthobacteraceae;g__Bradyrhizobium;s__Bradyrhizobium sp002831585 | 85.64 | 1.94 | 65.0 | 8,208 | 6,156,402 |
| MAG03618 | SX1_bin.36 | d__Bacteria;p__Bacteroidota_A;c__Ignavibacteria;o__Ignavibacteriales;f__Melioribacteraceae;g__;s__ | 94.33 | 0.69 | 36.0 | 39,319 | 3,254,520 |
| MAG03619 | SX1_bin.38 | d__Bacteria;p__Zixibacteria;c__MSB-5A5;o__WJJR01;f__JAJRUJ01;g__;s__ | 83.08 | 0.88 | 60.0 | 6,462 | 1,706,249 |
| MAG03620 | SX1_bin.41 | d__Bacteria;p__Nitrospinota;c__UBA7883;o__;f__;g__;s__ | 80.6 | 1.63 | 55.0 | 3,384 | 2,325,137 |
| MAG03621 | SX1_bin.42 | d__Archaea;p__Aenigmatarchaeota;c__Aenigmatarchaeia;o__QMZP01;f__QMZT01;g__JBGPQP01;s__ | 59.42 | 1.75 | 53.0 | 4,122 | 524,961 |
| MAG03622 | SX1_bin.44 | d__Bacteria;p__Desulfobacterota;c__GWC2-55-46;o__GWC2-55-46;f__GWC2-55-46;g__;s__ | 81.23 | 1.47 | 63.0 | 5,688 | 1,757,725 |
| MAG03623 | SX1_bin.47 | d__Bacteria;p__Nitrospirota;c__JAOUDF01;o__JAOUDF01;f__JAOUDF01;g__JAOUDF01;s__JAOUDF01 sp029859385 | 100.0 | 0.68 | 56.0 | 14,316 | 2,773,862 |
| MAG03624 | SX1_bin.49 | d__Bacteria;p__Patescibacteriota;c__Patescibacteriia;o__Patescibacteriales;f__SZUA-104;g__;s__ | 97.34 | 1.58 | 42.0 | 10,157 | 1,130,296 |
| MAG03625 | SX1_bin.5 | d__Bacteria;p__Chloroflexota;c__Dehalococcoidia;o__Dehalococcoidales;f__RBG-16-60-22;g__RBG-13-51-18;s__ | 72.24 | 1.15 | 51.0 | 6,243 | 1,237,758 |
| MAG03626 | SX1_bin.52 | d__Bacteria;p__Desulfobacterota;c__Syntrophia;o__Syntrophales;f__UBA2192;g__JAPLJU01;s__ | 57.7 | 0.41 | 56.0 | 3,357 | 1,351,319 |
| MAG03627 | SX1_bin.53 | d__Bacteria;p__Nitrospinota;c__JACRGO01;o__JACRGO01;f__JACRGO01;g__JACRGO01;s__ | 94.88 | 5.9 | 54.0 | 5,012 | 2,669,173 |
| MAG03628 | SX1_bin.54 | d__Archaea;p__Halobacteriota;c__Methanomicrobia;o__Methanomicrobiales;f__JACTUA01;g__JAJRCM01;s__ | 74.19 | 0.36 | 53.0 | 4,166 | 1,212,428 |
| MAG03629 | SX1_bin.57 | d__Archaea;p__Thermoplasmatota;c__DTKX01;o__DTKX01;f__GCA-020343715;g__;s__ | 65.17 | 2.87 | 68.0 | 2,185 | 2,234,066 |
| MAG03630 | SX1_bin.58 | d__Bacteria;p__Pseudomonadota;c__Alphaproteobacteria;o__Ferrovibrionales;f__Ferrovibrionaceae;g__;s__ | 73.48 | 3.14 | 65.0 | 3,693 | 2,028,187 |
| MAG03631 | SX1_bin.7 | d__Archaea;p__Aenigmatarchaeota;c__Aenigmatarchaeia;o__CG10238-14;f__SCSR01;g__DATEUU01;s__ | 87.22 | 0.56 | 40.0 | 10,145 | 738,474 |
| MAG03632 | SX1_bin.9 | d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Acidiferrobacterales;f__UBA6901;g__;s__ | 79.11 | 1.13 | 61.0 | 6,923 | 2,226,352 |
| ID | Name | Taxonomy | Completeness | Contamination | GC | N50 | Size |