GWM
Global Wetland Microbiome Database
Overview
| ID | SMP0092 |
|---|---|
| Name | SX2 |
| Type | river |
| Habitat | sediment |
| Country | China |
| Latitude and longitude | 30.7722 N 111.1856 E |
| Altitude (m) | 373.0 |
| Instrument | illumina NovaSeq X Plus |
| AvgSpotLen (bp) | 300 |
| LibraryLayout | PAIRED |
| Project | PRJNA1430164 |
| Collection Date | |
| Physicochemical properties | |
| TN (g/kg) | 0.7840 |
| TP (g/kg) | 0.7382 |
| TS (g/kg) | 0.7709 |
| TC (g/kg) | 24.1600 |
| Fe (mg/kg) | 36527.8970 |
| Mn (mg/kg) | 721.0300 |
| C/N | 30.8161 |
| IC (g/kg) | 15.6791 |
| MBC (g/kg) | 0.0815 |
| pH | 7.9200 |
| Water content (%) | 0.3671 |
| NO3- (mg/kg) | 0.5588 |
| NH4+ (mg/kg) | 4.7282 |
Location
Community profile
The microbial community profiled by MetaPhlAn4
MAGs16
The MAGs in SMP0092
| ID | Name | Taxonomy | Completeness | Contamination | GC | N50 | Size |
|---|---|---|---|---|---|---|---|
| MAG03633 | SX2_bin.1 | d__Bacteria;p__Desulfobacterota_E;c__Deferrimicrobia;o__Deferrimicrobiales;f__Deferrimicrobiaceae;g__;s__ | 77.0 | 1.96 | 68.0 | 5,479 | 1,844,578 |
| MAG03634 | SX2_bin.10 | d__Bacteria;p__Campylobacterota;c__Campylobacteria;o__Campylobacterales;f__Sulfurimonadaceae;g__Sulfuricurvum;s__ | 77.25 | 4.66 | 42.0 | 6,370 | 1,638,538 |
| MAG03635 | SX2_bin.12 | d__Bacteria;p__Nitrospirota;c__JAOUDF01;o__JAOUDF01;f__JAOUDF01;g__JAOUDF01;s__JAOUDF01 sp029859385 | 95.38 | 0.97 | 56.0 | 13,167 | 2,677,139 |
| MAG03636 | SX2_bin.14 | d__Bacteria;p__Spirochaetota;c__Spirochaetia;o__SZUA-6;f__Fen-1364;g__JAPLSM01;s__ | 72.94 | 1.19 | 70.0 | 7,945 | 3,000,441 |
| MAG03637 | SX2_bin.15 | d__Bacteria;p__Desulfobacterota;c__Desulfuromonadia;o__Geobacterales;f__DSM-12255;g__VEOV01;s__ | 83.32 | 5.52 | 53.0 | 4,134 | 2,577,641 |
| MAG03638 | SX2_bin.2 | d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Acidiferrobacterales;f__UBA6901;g__;s__ | 90.4 | 1.47 | 61.0 | 12,173 | 2,267,745 |
| MAG03639 | SX2_bin.21 | d__Bacteria;p__Desulfobacterota;c__GWC2-55-46;o__GWC2-55-46;f__GWC2-55-46;g__;s__ | 60.57 | 0.63 | 63.0 | 2,698 | 1,167,503 |
| MAG03640 | SX2_bin.22 | d__Bacteria;p__Nitrospinota;c__UBA7883;o__JACRGQ01;f__JACRGQ01;g__JAOUMJ01;s__ | 64.93 | 1.67 | 56.0 | 1,792 | 1,495,016 |
| MAG03641 | SX2_bin.25 | d__Archaea;p__Hydrothermarchaeota;c__Hydrothermarchaeia;o__Hydrothermarchaeales;f__JAZFTJ01;g__;s__ | 90.43 | 1.34 | 59.0 | 7,346 | 1,135,993 |
| MAG03642 | SX2_bin.26 | d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Eutrophobiales;f__Eutrophobiaceae;g__2-02-FULL-47-50;s__ | 64.77 | 1.65 | 56.0 | 3,055 | 1,343,404 |
| MAG03643 | SX2_bin.27 | d__Archaea;p__Altiarchaeota;c__Altiarchaeia;o__IMC4;f__SCGC-AAA252-I15;g__;s__ | 54.13 | 0.58 | 57.0 | 3,157 | 1,142,561 |
| MAG03644 | SX2_bin.28 | d__Bacteria;p__Actinomycetota;c__Coriobacteriia;o__Anaerosomatales;f__PALSA-660;g__;s__ | 56.09 | 0.79 | 69.0 | 5,729 | 925,815 |
| MAG03645 | SX2_bin.31 | d__Archaea;p__Aenigmatarchaeota;c__Aenigmatarchaeia;o__CG10238-14;f__SCSR01;g__DATEUU01;s__ | 86.32 | 0.15 | 40.0 | 9,430 | 838,457 |
| MAG03646 | SX2_bin.35 | d__Bacteria;p__Desulfobacterota;c__GWC2-55-46;o__GWC2-55-46;f__DRQE01;g__JAOUFM01;s__ | 88.0 | 2.24 | 50.0 | 7,956 | 1,541,997 |
| MAG03647 | SX2_bin.7 | d__Bacteria;p__Desulfobacterota;c__GWC2-55-46;o__GWC2-55-46;f__GWC2-55-46;g__GWA2-54-12;s__ | 73.68 | 1.22 | 59.0 | 3,286 | 1,496,619 |
| MAG03648 | SX2_bin.9 | d__Bacteria;p__Zixibacteria;c__MSB-5A5;o__CAIYYT01;f__CAIYYT01;g__;s__ | 57.92 | 0.2 | 56.0 | 2,982 | 1,411,987 |
| ID | Name | Taxonomy | Completeness | Contamination | GC | N50 | Size |