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Overview

ID SMP0099
Name TGS3
Type river
Habitat sediment
Country China
Latitude and longitude 34.608889 N 110.293889 E
Altitude (m) 383.0
Instrument illumina NovaSeq X Plus
AvgSpotLen (bp) 300
LibraryLayout PAIRED
Project PRJNA1430164
Collection Date
Physicochemical properties
TN (g/kg) 0.6782
TP (g/kg) 0.5239
TS (g/kg) 0.1037
TC (g/kg) 15.9300
Fe (mg/kg) 26230.6238
Mn (mg/kg) 398.8658
C/N 23.4901
IC (g/kg) 12.9389
MBC (g/kg) 0.1199
pH 8.3800
Water content (%) 0.2111
NO3- (mg/kg) -1.4950
NH4+ (mg/kg) 2.4392

Location

Community profile
The microbial community profiled by MetaPhlAn4

MAGs18
The MAGs in SMP0099

ID Name Taxonomy Completeness Contamination GCN50Size
MAG03827 TGS3_bin.1 d__Bacteria;p__Myxococcota;c__Myxococcia;o__Myxococcales;f__Anaeromyxobacteraceae;g__JACRMN01;s__ 72.84 1.79 74.0 3,675 3,470,863
MAG03828 TGS3_bin.10 d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Burkholderiales;f__SG8-41;g__Ga0077527;s__ 85.83 4.63 65.0 8,966 2,616,447
MAG03829 TGS3_bin.11 d__Bacteria;p__Pseudomonadota;c__Alphaproteobacteria;o__Caulobacterales;f__Parvularculaceae;g__CV81;s__ 79.97 0.77 65.0 6,519 2,755,908
MAG03830 TGS3_bin.12 d__Bacteria;p__Planctomycetota;c__Phycisphaerae;o__Phycisphaerales;f__UBA1924;g__GCA-2732755;s__ 68.04 0.29 67.0 6,542 1,905,089
MAG03831 TGS3_bin.13 d__Bacteria;p__Pseudomonadota;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Sphingosinicella;s__ 83.4 3.59 65.0 5,643 2,093,006
MAG03832 TGS3_bin.14 d__Bacteria;p__Acidobacteriota;c__Thermoanaerobaculia;o__Gp7-AA8;f__Gp7-AA8;g__QHVT01;s__ 69.57 0.74 66.0 14,830 4,462,930
MAG03833 TGS3_bin.15 d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Burkholderiales;f__Rhodocyclaceae;g__;s__ 90.47 2.58 63.0 45,822 4,287,773
MAG03834 TGS3_bin.17 d__Bacteria;p__Campylobacterota;c__Campylobacteria;o__Campylobacterales;f__Arcobacteraceae;g__Aliarcobacter;s__Aliarcobacter sp028688995 73.63 1.39 29.0 2,026 1,666,113
MAG03835 TGS3_bin.18 d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Pseudomonadales;f__Moraxellaceae;g__Perlucidibaca;s__ 100.0 1.02 65.0 36,264 2,381,131
MAG03836 TGS3_bin.19 d__Bacteria;p__Elusimicrobiota;c__Elusimicrobia;o__UBA1565;f__UBA9628;g__GWA2-66-18;s__ 86.85 4.3 69.0 13,733 3,256,649
MAG03837 TGS3_bin.2 d__Bacteria;p__Planctomycetota;c__UBA1135;o__UBA1135;f__GCA-002686595;g__RI-242;s__ 88.2 2.56 70.0 10,662 5,000,016
MAG03838 TGS3_bin.20 d__Bacteria;p__Pseudomonadota;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Aquisediminimonas;s__ 90.07 3.09 62.0 13,752 2,446,660
MAG03839 TGS3_bin.21 d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Pseudomonadales;f__Moraxellaceae;g__UBA2031;s__ 77.53 4.77 61.0 10,977 2,223,854
MAG03840 TGS3_bin.23 d__Bacteria;p__Desulfobacterota;c__Desulfuromonadia;o__Geobacterales;f__Geobacteraceae;g__Geomonas;s__ 74.22 3.88 63.0 8,641 3,217,479
MAG03841 TGS3_bin.26 d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Steroidobacterales;f__Steroidobacteraceae;g__ZC4RG30;s__ 65.84 1.97 65.0 11,190 2,588,422
MAG03842 TGS3_bin.6 d__Bacteria;p__Patescibacteriota;c__Patescibacteriia;o__SG8-24;f__SG8-24;g__;s__ 93.15 0.71 63.0 15,656 1,243,750
MAG03843 TGS3_bin.8 d__Bacteria;p__Myxococcota;c__Polyangia;o__Haliangiales;f__Haliangiaceae;g__JABFXX01;s__ 83.65 0.6 70.0 19,523 8,536,100
MAG03844 TGS3_bin.9 d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Burkholderia;s__Burkholderia sp002223055 99.98 0.18 67.0 36,971 7,563,456
ID Name Taxonomy Completeness Contamination GCN50Size