GWM
Global Wetland Microbiome Database
Overview
| ID | SMP0102 |
|---|---|
| Name | TH3 |
| Type | lake |
| Habitat | sediment |
| Country | China |
| Latitude and longitude | 31.3307 N 120.1704 E |
| Altitude (m) | 12.2 |
| Instrument | illumina NovaSeq X Plus |
| AvgSpotLen (bp) | 300 |
| LibraryLayout | PAIRED |
| Project | PRJNA1430164 |
| Collection Date | 2025-04-09 |
| Physicochemical properties | |
| TN (g/kg) | 1.4982 |
| TP (g/kg) | 0.5493 |
| TS (g/kg) | 0.2976 |
| TC (g/kg) | 11.7800 |
| Fe (mg/kg) | 23041.8944 |
| Mn (mg/kg) | 442.6230 |
| C/N | 7.8628 |
| IC (g/kg) | 1.6149 |
| MBC (g/kg) | 1.2663 |
| pH | 7.8000 |
| Water content (%) | 0.5547 |
| NO3- (mg/kg) | 4.3622 |
| NH4+ (mg/kg) | 26.4779 |
Location
Community profile
The microbial community profiled by MetaPhlAn4
MAGs41
The MAGs in SMP0102
| ID | Name | Taxonomy | Completeness | Contamination | GC | N50 | Size |
|---|---|---|---|---|---|---|---|
| MAG03931 | TH3_bin.1 | d__Archaea;p__Thermoplasmatota;c__Thermoplasmata;o__UBA10834;f__UBA10834;g__UBA9653;s__ | 68.61 | 3.13 | 64.0 | 4,722 | 1,425,921 |
| MAG03932 | TH3_bin.10 | d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Crocinitomicaceae;g__;s__ | 87.11 | 2.52 | 39.0 | 13,382 | 2,520,654 |
| MAG03933 | TH3_bin.13 | d__Archaea;p__Thermoplasmatota;c__DTKX01;o__VGTL01;f__VGTL01;g__VGTL01;s__ | 63.46 | 1.4 | 65.0 | 4,035 | 2,113,242 |
| MAG03934 | TH3_bin.15 | d__Bacteria;p__Nitrospirota;c__Thermodesulfovibrionia;o__Thermodesulfovibrionales;f__;g__;s__ | 92.81 | 0.5 | 60.0 | 14,871 | 2,191,409 |
| MAG03935 | TH3_bin.17 | d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__B-17B0;f__B-17BO;g__JAHEYG01;s__ | 100.0 | 3.01 | 37.0 | 26,542 | 3,252,215 |
| MAG03936 | TH3_bin.18 | d__Bacteria;p__Nitrospirota;c__Thermodesulfovibrionia;o__Thermodesulfovibrionales;f__UBA6898;g__UBA6898;s__ | 70.91 | 3.28 | 52.0 | 9,219 | 2,207,363 |
| MAG03937 | TH3_bin.19 | d__Bacteria;p__Verrucomicrobiota;c__Verrucomicrobiia;o__Limisphaerales;f__UBA11358;g__WYBW01;s__ | 92.43 | 5.53 | 60.0 | 25,040 | 7,150,619 |
| MAG03938 | TH3_bin.22 | d__Bacteria;p__Nitrospirota;c__Thermodesulfovibrionia;o__SZUA-242;f__SZUA-242;g__;s__ | 75.1 | 1.28 | 61.0 | 7,997 | 1,877,518 |
| MAG03939 | TH3_bin.25 | d__Bacteria;p__Desulfobacterota;c__Desulfobaccia;o__Desulfobaccales;f__0-14-0-80-60-11;g__JAILZL01;s__ | 72.69 | 2.43 | 63.0 | 3,409 | 1,871,898 |
| MAG03940 | TH3_bin.27 | d__Bacteria;p__Acidobacteriota;c__Aminicenantia;o__UBA2199;f__UBA2199;g__UBA2199;s__ | 75.05 | 0.86 | 61.0 | 5,341 | 1,822,534 |
| MAG03941 | TH3_bin.28 | d__Bacteria;p__Chloroflexota;c__Anaerolineae;o__Anaerolineales;f__Villigracilaceae;g__;s__ | 77.12 | 0.85 | 53.0 | 4,927 | 2,421,788 |
| MAG03942 | TH3_bin.3 | d__Archaea;p__Halobacteriota;c__Methanomicrobia;o__Methanomicrobiales;f__Methanospirillaceae;g__UBA9949;s__ | 89.94 | 0.01 | 53.0 | 13,589 | 1,508,559 |
| MAG03943 | TH3_bin.30 | d__Bacteria;p__Bacteroidota_A;c__UBA10030;o__UBA10030;f__UBA10030;g__;s__ | 98.95 | 2.95 | 59.0 | 19,084 | 3,374,792 |
| MAG03944 | TH3_bin.31 | d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Palsa-948;f__Palsa-948;g__Palsa-948;s__ | 100.0 | 3.57 | 42.0 | 26,006 | 2,851,593 |
| MAG03945 | TH3_bin.33 | d__Bacteria;p__Nitrospirota;c__Thermodesulfovibrionia;o__Thermodesulfovibrionales;f__;g__;s__ | 94.77 | 0.63 | 58.0 | 12,728 | 2,447,961 |
| MAG03946 | TH3_bin.34 | d__Bacteria;p__Bacteroidota_A;c__UBA10030;o__UBA10030;f__UBA6906;g__;s__ | 93.98 | 1.99 | 67.0 | 15,490 | 3,036,123 |
| MAG03947 | TH3_bin.36 | d__Bacteria;p__Acidobacteriota;c__Thermoanaerobaculia;o__UBA5066;f__UBA5066;g__DAOMFB01;s__ | 67.89 | 1.01 | 71.0 | 5,666 | 2,545,674 |
| MAG03948 | TH3_bin.37 | d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__B-17B0;f__B-17BO;g__Aurantibacillus;s__ | 64.81 | 1.88 | 36.0 | 5,105 | 2,294,660 |
| MAG03949 | TH3_bin.4 | d__Bacteria;p__Desulfobacterota;c__Syntrophobacteria;o__BM002;f__BM002;g__JAGFXI01;s__ | 74.57 | 4.63 | 61.0 | 5,517 | 3,094,938 |
| MAG03950 | TH3_bin.40 | d__Bacteria;p__Methylomirabilota;c__Methylomirabilia;o__Methylomirabilales;f__2-02-FULL-66-22;g__2-02-FULL-66-22;s__ | 58.34 | 0.8 | 65.0 | 11,035 | 3,169,187 |
| MAG03951 | TH3_bin.41 | d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__2-12-FULL-35-15;f__2-12-FULL-35-15;g__2-12-FULL-35-15;s__ | 84.82 | 1.32 | 37.0 | 10,360 | 2,829,189 |
| MAG03952 | TH3_bin.42 | d__Bacteria;p__Bacteroidota_A;c__UBA10030;o__UBA10030;f__UBA6906;g__UBA6906;s__ | 94.71 | 8.68 | 61.0 | 23,519 | 3,883,530 |
| MAG03953 | TH3_bin.43 | d__Bacteria;p__Chloroflexota;c__Anaerolineae;o__Anaerolineales;f__Villigracilaceae;g__DAOUAP01;s__ | 79.57 | 4.72 | 55.0 | 13,943 | 3,753,000 |
| MAG03954 | TH3_bin.45 | d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Methylococcales;f__Methylomonadaceae;g__;s__ | 84.02 | 4.42 | 53.0 | 6,639 | 2,544,944 |
| MAG03955 | TH3_bin.46 | d__Bacteria;p__Planctomycetota;c__Phycisphaerae;o__Sedimentisphaerales;f__Anaerohalosphaeraceae;g__UBA7708;s__ | 69.43 | 2.97 | 49.0 | 8,380 | 1,972,959 |
| MAG03956 | TH3_bin.47 | d__Bacteria;p__Bacteroidota_A;c__UBA10030;o__UBA10030;f__UBA6906;g__;s__ | 96.75 | 8.12 | 60.0 | 35,662 | 3,746,801 |
| MAG03957 | TH3_bin.49 | d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Crocinitomicaceae;g__JASBTZ01;s__ | 79.24 | 2.59 | 44.0 | 3,580 | 1,830,914 |
| MAG03958 | TH3_bin.5 | d__Bacteria;p__Verrucomicrobiota;c__Verrucomicrobiia;o__Palsa-1439;f__;g__;s__ | 98.39 | 1.02 | 61.0 | 15,032 | 3,841,602 |
| MAG03959 | TH3_bin.50 | d__Bacteria;p__Nitrospirota;c__Thermodesulfovibrionia;o__Thermodesulfovibrionales;f__UBA6898;g__UBA6898;s__ | 90.45 | 1.82 | 49.0 | 12,090 | 2,195,910 |
| MAG03960 | TH3_bin.56 | d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Palsa-948;f__Palsa-948;g__Palsa-948;s__ | 100.0 | 1.12 | 44.0 | 14,405 | 2,492,605 |
| MAG03961 | TH3_bin.57 | d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Burkholderiales;f__Casimicrobiaceae;g__CAIWHR01;s__ | 96.76 | 5.31 | 67.0 | 10,646 | 3,386,693 |
| MAG03962 | TH3_bin.59 | d__Bacteria;p__Nitrospirota;c__Thermodesulfovibrionia;o__Thermodesulfovibrionales;f__UBA9159;g__;s__ | 76.9 | 0.59 | 56.0 | 5,431 | 1,963,903 |
| MAG03963 | TH3_bin.60 | d__Bacteria;p__Myxococcota;c__Polyangia;o__Palsa-1104;f__Palsa-1104;g__JBDTCO01;s__ | 81.35 | 1.25 | 69.0 | 9,219 | 3,740,746 |
| MAG03964 | TH3_bin.63 | d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__SZUA-229;f__SZUA-229;g__JACPVK01;s__ | 95.6 | 1.5 | 51.0 | 12,275 | 2,542,479 |
| MAG03965 | TH3_bin.64 | d__Bacteria;p__Nitrospirota;c__Thermodesulfovibrionia;o__UBA6902;f__UBA6902;g__UBA6902;s__ | 71.42 | 3.52 | 47.0 | 4,256 | 1,829,776 |
| MAG03966 | TH3_bin.65 | d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Pseudomonadales;f__Moraxellaceae;g__UBA2031;s__UBA2031 sp003543245 | 97.85 | 1.83 | 59.0 | 14,233 | 2,448,715 |
| MAG03967 | TH3_bin.69 | d__Bacteria;p__Bacteroidota_A;c__UBA10030;o__UBA10030;f__UBA6906;g__;s__ | 92.21 | 0.14 | 64.0 | 77,910 | 3,301,276 |
| MAG03968 | TH3_bin.70 | d__Bacteria;p__Desulfobacterota;c__BSN033;o__BSN033;f__UBA1163;g__UBA1163;s__ | 96.99 | 6.39 | 46.0 | 21,988 | 4,705,716 |
| MAG03969 | TH3_bin.71 | d__Bacteria;p__Pseudomonadota;c__Alphaproteobacteria;o__Reyranellales;f__JAQSWP01;g__JAQSWP01;s__ | 71.77 | 2.89 | 65.0 | 2,740 | 1,968,426 |
| MAG03970 | TH3_bin.8 | d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Aquabacterium;s__ | 97.56 | 4.37 | 64.0 | 12,692 | 3,920,070 |
| MAG03971 | TH3_bin.9 | d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Burkholderiales;f__Nitrosomonadaceae;g__Nitrosomonas;s__ | 88.03 | 0.21 | 45.0 | 18,010 | 2,155,731 |
| ID | Name | Taxonomy | Completeness | Contamination | GC | N50 | Size |