GWM
Global Wetland Microbiome Database
Overview
| ID | SMP0106 |
|---|---|
| Name | WH1 |
| Type | river |
| Habitat | sediment |
| Country | China |
| Latitude and longitude | 34.6105556 N 110.253611 E |
| Altitude (m) | 300.7 |
| Instrument | illumina NovaSeq X Plus |
| AvgSpotLen (bp) | 300 |
| LibraryLayout | PAIRED |
| Project | PRJNA1430164 |
| Collection Date | 2025-04-23 |
| Physicochemical properties | |
| TN (g/kg) | 0.7801 |
| TP (g/kg) | 0.6770 |
| TS (g/kg) | 1.3178 |
| TC (g/kg) | 26.3230 |
| Fe (mg/kg) | 37372.4490 |
| Mn (mg/kg) | 645.9059 |
| C/N | |
| IC (g/kg) | |
| MBC (g/kg) | 0.1040 |
| pH | 6.8400 |
| Water content (%) | 0.4857 |
| NO3- (mg/kg) | 7.8853 |
| NH4+ (mg/kg) | 2.4191 |
Location
Community profile
The microbial community profiled by MetaPhlAn4
MAGs39
The MAGs in SMP0106
| ID | Name | Taxonomy | Completeness | Contamination | GC | N50 | Size |
|---|---|---|---|---|---|---|---|
| MAG04069 | WH1_bin.1 | d__Bacteria;p__Desulfobacterota_E;c__Deferrimicrobia;o__Deferrimicrobiales;f__Deferrimicrobiaceae;g__JAGGAJ01;s__ | 84.49 | 1.0 | 69.0 | 7,079 | 1,817,799 |
| MAG04070 | WH1_bin.11 | d__Archaea;p__Nanobdellota;c__Nanobdellia;o__Woesearchaeales;f__UBA525;g__UBA153;s__ | 90.32 | 0.76 | 64.0 | 8,741 | 1,273,895 |
| MAG04071 | WH1_bin.12 | d__Bacteria;p__Actinomycetota;c__Acidimicrobiia;o__UBA5794;f__UBA11373;g__UBA11373;s__ | 78.56 | 2.45 | 67.0 | 6,953 | 1,995,792 |
| MAG04072 | WH1_bin.13 | d__Bacteria;p__Bacteroidota_A;c__Rhodothermia;o__Rhodothermales;f__UBA10348;g__JAHEEH01;s__ | 88.91 | 0.86 | 69.0 | 15,615 | 3,213,639 |
| MAG04073 | WH1_bin.14 | d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas_E;s__Pseudomonas_E fluorescens_AN | 89.68 | 0.67 | 61.0 | 27,482 | 6,255,528 |
| MAG04074 | WH1_bin.15 | d__Bacteria;p__Myxococcota;c__Polyangia;o__Polyangiales;f__SG8-38;g__;s__ | 90.66 | 2.17 | 69.0 | 8,431 | 5,859,612 |
| MAG04075 | WH1_bin.17 | d__Bacteria;p__Patescibacteriota;c__Saccharimonadia;o__Saccharimonadales;f__CAIOMD01;g__;s__ | 86.08 | 0.65 | 40.0 | 9,332 | 642,044 |
| MAG04076 | WH1_bin.18 | d__Bacteria;p__CAKKQC01;c__CAKKQC01;o__CAKKQC01;f__CAKKQC01;g__;s__ | 94.72 | 0.08 | 66.0 | 23,080 | 2,665,989 |
| MAG04077 | WH1_bin.21 | d__Bacteria;p__Myxococcota;c__Polyangia;o__Haliangiales;f__Haliangiaceae;g__JABFXX01;s__ | 78.17 | 2.83 | 72.0 | 5,042 | 3,797,965 |
| MAG04078 | WH1_bin.22 | d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Nevskiales;f__Nevskiaceae;g__Nevskia;s__ | 100.0 | 3.94 | 68.0 | 12,314 | 3,710,441 |
| MAG04079 | WH1_bin.23 | d__Bacteria;p__Chloroflexota;c__Anaerolineae;o__Anaerolineales;f__UBA4823;g__JAKOUW01;s__ | 80.83 | 3.13 | 57.0 | 22,581 | 2,282,387 |
| MAG04080 | WH1_bin.25 | d__Bacteria;p__CALINM01;c__CALINM01;o__CALINM01;f__CALINM01;g__;s__ | 74.76 | 0.59 | 45.0 | 5,242 | 1,984,293 |
| MAG04081 | WH1_bin.27 | d__Bacteria;p__Chloroflexota;c__Anaerolineae;o__Anaerolineales;f__UBA6663;g__;s__ | 63.93 | 2.14 | 68.0 | 3,036 | 2,832,264 |
| MAG04082 | WH1_bin.28 | d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Steroidobacterales;f__Steroidobacteraceae;g__;s__ | 60.61 | 0.53 | 67.0 | 22,239 | 1,616,203 |
| MAG04083 | WH1_bin.3 | d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Burkholderiales;f__SG8-41;g__Ga0077527;s__ | 91.04 | 2.72 | 65.0 | 10,073 | 2,753,541 |
| MAG04084 | WH1_bin.30 | d__Bacteria;p__CAKKQC01;c__CAKKQC01;o__CAKKQC01;f__CAKKQC01;g__CAKKQC01;s__ | 90.05 | 0.21 | 70.0 | 21,862 | 3,384,782 |
| MAG04085 | WH1_bin.31 | d__Bacteria;p__Chloroflexota;c__Anaerolineae;o__Anaerolineales;f__Villigracilaceae;g__Defluviilinea;s__ | 90.19 | 2.3 | 52.0 | 12,748 | 4,614,297 |
| MAG04086 | WH1_bin.32 | d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Rubrivivax;s__ | 58.8 | 1.04 | 69.0 | 6,386 | 1,589,524 |
| MAG04087 | WH1_bin.33 | d__Bacteria;p__Myxococcota;c__Polyangia;o__GCA-2747355;f__JAKLHH01;g__;s__ | 66.56 | 2.74 | 70.0 | 6,656 | 6,071,883 |
| MAG04088 | WH1_bin.34 | d__Bacteria;p__Nitrospirota;c__UBA9217;o__UBA9217;f__UBA9217;g__JAAXXJ01;s__ | 85.5 | 6.25 | 58.0 | 9,374 | 2,530,655 |
| MAG04089 | WH1_bin.35 | d__Bacteria;p__Desulfobacterota_E;c__Deferrimicrobia;o__Deferrimicrobiales;f__Deferrimicrobiaceae;g__Deferrimicrobium;s__ | 78.73 | 2.29 | 66.0 | 7,774 | 2,152,293 |
| MAG04090 | WH1_bin.36 | d__Bacteria;p__Acidobacteriota;c__Polarisedimenticolia;o__Polarisedimenticolales;f__DASRJG01;g__;s__ | 84.52 | 2.4 | 70.0 | 9,676 | 3,018,334 |
| MAG04091 | WH1_bin.37 | d__Bacteria;p__Armatimonadota;c__Fimbriimonadia;o__Fimbriimonadales;f__Fimbriimonadaceae;g__55-13;s__ | 88.31 | 2.27 | 59.0 | 6,252 | 3,003,389 |
| MAG04092 | WH1_bin.38 | d__Bacteria;p__CALINM01;c__CALINM01;o__CALINM01;f__CALINM01;g__;s__ | 83.47 | 0.65 | 59.0 | 10,570 | 1,784,275 |
| MAG04093 | WH1_bin.40 | d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Steroidobacterales;f__Steroidobacteraceae;g__;s__ | 84.52 | 4.64 | 68.0 | 7,059 | 1,880,442 |
| MAG04094 | WH1_bin.41 | d__Bacteria;p__Desulfobacterota_C;c__Deferrisomatia;o__Deferrisomatales;f__;g__;s__ | 91.82 | 3.75 | 67.0 | 5,257 | 2,643,697 |
| MAG04095 | WH1_bin.42 | d__Bacteria;p__Chloroflexota;c__Limnocylindria;o__Limnocylindrales;f__CSP1-4;g__CAIXZV01;s__ | 81.23 | 0.42 | 71.0 | 11,906 | 2,907,195 |
| MAG04096 | WH1_bin.43 | d__Bacteria;p__Patescibacteriota;c__Microgenomatia;o__GWA2-44-7;f__Amesbacteraceae;g__DAHWUD01;s__ | 98.43 | 0.38 | 41.0 | 70,383 | 949,423 |
| MAG04097 | WH1_bin.44 | d__Bacteria;p__Verrucomicrobiota;c__Verrucomicrobiia;o__Opitutales;f__Opitutaceae;g__DATKCJ01;s__ | 80.73 | 1.58 | 65.0 | 4,952 | 3,609,997 |
| MAG04098 | WH1_bin.45 | d__Bacteria;p__Chloroflexota;c__Anaerolineae;o__Anaerolineales;f__Villigracilaceae;g__UBA5195;s__ | 78.27 | 2.39 | 50.0 | 5,482 | 2,113,093 |
| MAG04099 | WH1_bin.46 | d__Bacteria;p__Desulfobacterota;c__Desulfuromonadia;o__Desulfuromonadales;f__BM103;g__VAUL01;s__ | 93.7 | 6.33 | 61.0 | 13,166 | 2,860,546 |
| MAG04100 | WH1_bin.48 | d__Bacteria;p__CALINM01;c__CALINM01;o__CALINM01;f__CALINM01;g__;s__ | 88.34 | 3.04 | 54.0 | 13,802 | 2,173,521 |
| MAG04101 | WH1_bin.49 | d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Rhodoferax;s__ | 69.67 | 3.36 | 62.0 | 5,863 | 2,548,314 |
| MAG04102 | WH1_bin.5 | d__Bacteria;p__Patescibacteriota;c__Patescibacteriia;o__Magasanikbacterales;f__UBA922;g__JAKITS01;s__ | 95.85 | 0.01 | 34.0 | 21,684 | 912,356 |
| MAG04103 | WH1_bin.50 | d__Bacteria;p__Myxococcota;c__Myxococcia;o__Myxococcales;f__Anaeromyxobacteraceae;g__Anaeromyxobacter;s__ | 93.35 | 1.96 | 73.0 | 3,666 | 3,340,366 |
| MAG04104 | WH1_bin.51 | d__Bacteria;p__Acidobacteriota;c__UBA4820;o__UBA4820;f__DSQY01;g__;s__ | 100.0 | 1.34 | 66.0 | 20,293 | 2,612,640 |
| MAG04105 | WH1_bin.58 | d__Bacteria;p__Myxococcota;c__Myxococcia;o__Myxococcales;f__Myxococcaceae;g__Archangium_A;s__ | 61.23 | 2.11 | 72.0 | 2,296 | 2,816,148 |
| MAG04106 | WH1_bin.6 | d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Chitinophagales;f__Saprospiraceae;g__M3007;s__ | 96.14 | 1.54 | 46.0 | 18,785 | 5,717,127 |
| MAG04107 | WH1_bin.60 | d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Flavobacteriaceae;g__Flavobacterium;s__ | 74.3 | 4.54 | 36.0 | 3,879 | 2,082,502 |
| ID | Name | Taxonomy | Completeness | Contamination | GC | N50 | Size |