GWM
Global Wetland Microbiome Database
Overview
| ID | SMP0109 |
|---|---|
| Name | WLSH1 |
| Type | lake |
| Habitat | sediment |
| Country | China |
| Latitude and longitude | 40.998611 N 108.861667 E |
| Altitude (m) | 988.6 |
| Instrument | illumina NovaSeq X Plus |
| AvgSpotLen (bp) | 300 |
| LibraryLayout | PAIRED |
| Project | PRJNA1430164 |
| Collection Date | 2025-04-26 |
| Physicochemical properties | |
| TN (g/kg) | 1.3936 |
| TP (g/kg) | 0.6673 |
| TS (g/kg) | 3.1855 |
| TC (g/kg) | 36.0990 |
| Fe (mg/kg) | 34081.2891 |
| Mn (mg/kg) | 598.4848 |
| C/N | |
| IC (g/kg) | |
| MBC (g/kg) | 0.2843 |
| pH | 6.9100 |
| Water content (%) | 0.5517 |
| NO3- (mg/kg) | 9.0081 |
| NH4+ (mg/kg) | 2.1098 |
Location
Community profile
The microbial community profiled by MetaPhlAn4
MAGs21
The MAGs in SMP0109
| ID | Name | Taxonomy | Completeness | Contamination | GC | N50 | Size |
|---|---|---|---|---|---|---|---|
| MAG04171 | WLSH1_bin.1 | d__Bacteria;p__Fibrobacterota;c__Chitinivibrionia;o__Chitinivibrionales;f__Chitinispirillaceae;g__JAFGIN01;s__ | 63.26 | 2.47 | 44.0 | 3,604 | 3,031,167 |
| MAG04172 | WLSH1_bin.10 | d__Bacteria;p__Acidobacteriota;c__Thermoanaerobaculia;o__Thermoanaerobaculales;f__Sulfomarinibacteraceae;g__Sulfomarinibacter;s__ | 65.05 | 2.29 | 66.0 | 4,363 | 2,885,910 |
| MAG04173 | WLSH1_bin.15 | d__Bacteria;p__Patescibacteriota;c__JAEDAM01;o__BD1-5;f__UBA2023;g__UBA1545;s__ | 78.82 | 4.21 | 42.0 | 2,473 | 909,024 |
| MAG04174 | WLSH1_bin.17 | d__Bacteria;p__Zixibacteria;c__MSB-5A5;o__GN15;f__FEB-12;g__GCA-020346225;s__ | 98.37 | 4.78 | 52.0 | 12,048 | 2,636,564 |
| MAG04175 | WLSH1_bin.21 | d__Bacteria;p__Myxococcota;c__Polyangia;o__Fen-1088;f__Fen-1088;g__Fen-1118;s__ | 100.0 | 6.09 | 56.0 | 22,562 | 4,665,760 |
| MAG04176 | WLSH1_bin.23 | d__Bacteria;p__Edwardsbacteria;c__AC1;o__AC1;f__EtOH8;g__UBA2226;s__ | 56.26 | 0.53 | 51.0 | 4,817 | 1,120,523 |
| MAG04177 | WLSH1_bin.24 | d__Bacteria;p__Desulfobacterota;c__Desulfobacteria;o__Desulfobacterales;f__UBA11574;g__UBA11574;s__ | 78.83 | 4.68 | 45.0 | 5,390 | 2,406,863 |
| MAG04178 | WLSH1_bin.25 | d__Bacteria;p__Omnitrophota;c__Koll11;o__Gygaellales;f__Profunditerraquicolaceae;g__;s__ | 54.71 | 0.4 | 42.0 | 3,534 | 993,146 |
| MAG04179 | WLSH1_bin.29 | d__Bacteria;p__Nitrospirota;c__Thermodesulfovibrionia;o__Thermodesulfovibrionales;f__SM23-35;g__JALHSV01;s__ | 98.57 | 2.41 | 49.0 | 8,408 | 1,982,234 |
| MAG04180 | WLSH1_bin.3 | d__Archaea;p__Thermoplasmatota;c__Thermoplasmata;o__UBA10834;f__UBA10834;g__UBA9653;s__ | 67.65 | 0.46 | 65.0 | 29,181 | 1,468,671 |
| MAG04181 | WLSH1_bin.31 | d__Bacteria;p__Acidobacteriota;c__Aminicenantia;o__Aminicenantales;f__RBG-16-66-30;g__RBG-16-66-30;s__ | 80.06 | 1.94 | 66.0 | 10,997 | 2,339,177 |
| MAG04182 | WLSH1_bin.34 | d__Bacteria;p__Campylobacterota;c__Campylobacteria;o__Campylobacterales;f__Sulfurimonadaceae;g__Sulfuricurvum;s__ | 72.07 | 2.89 | 47.0 | 5,850 | 1,614,151 |
| MAG04183 | WLSH1_bin.36 | d__Bacteria;p__Desulfobacterota;c__Syntrophobacteria;o__Syntrophobacterales;f__;g__;s__ | 84.81 | 6.13 | 56.0 | 4,945 | 3,294,702 |
| MAG04184 | WLSH1_bin.37 | d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Crocinitomicaceae;g__JADJGJ01;s__ | 100.0 | 3.97 | 38.0 | 6,131 | 3,226,843 |
| MAG04185 | WLSH1_bin.38 | d__Bacteria;p__Krumholzibacteriota;c__Krumholzibacteriia;o__Krumholzibacteriales;f__Krumholzibacteriaceae;g__SSS58A;s__ | 93.96 | 2.78 | 66.0 | 10,022 | 2,456,879 |
| MAG04186 | WLSH1_bin.39 | d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Prolixibacteraceae;g__UBA1413;s__ | 92.26 | 0.33 | 47.0 | 15,625 | 4,065,319 |
| MAG04187 | WLSH1_bin.41 | d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Burkholderiales;f__Nitrosomonadaceae;g__Nitrosomonas;s__ | 67.29 | 1.07 | 46.0 | 8,308 | 1,888,905 |
| MAG04188 | WLSH1_bin.43 | d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Xanthomonadales;f__Xanthomonadaceae;g__Arenimonas;s__ | 67.51 | 2.61 | 69.0 | 4,530 | 2,169,791 |
| MAG04189 | WLSH1_bin.6 | d__Bacteria;p__Omnitrophota;c__Koll11;o__Gygaellales;f__Profunditerraquicolaceae;g__UBA6249;s__ | 96.79 | 0.82 | 42.0 | 13,759 | 1,298,683 |
| MAG04190 | WLSH1_bin.8 | d__Bacteria;p__Myxococcota;c__UBA796;o__UBA796;f__GCA-2862545;g__SYKL01;s__ | 86.67 | 1.52 | 69.0 | 6,668 | 5,695,770 |
| MAG04191 | WLSH1_bin.9 | d__Bacteria;p__Campylobacterota;c__Campylobacteria;o__Campylobacterales;f__Sulfurovaceae;g__BN30871;s__BN30871 sp001493195 | 73.46 | 0.77 | 33.0 | 2,982 | 1,082,899 |
| ID | Name | Taxonomy | Completeness | Contamination | GC | N50 | Size |