GWM
Global Wetland Microbiome Database
Overview
| ID | SMP0110 |
|---|---|
| Name | WLSH2 |
| Type | lake |
| Habitat | sediment |
| Country | China |
| Latitude and longitude | 40.998611 N 108.861667 E |
| Altitude (m) | 988.6 |
| Instrument | illumina NovaSeq X Plus |
| AvgSpotLen (bp) | 300 |
| LibraryLayout | PAIRED |
| Project | PRJNA1430164 |
| Collection Date | 2025-04-26 |
| Physicochemical properties | |
| TN (g/kg) | 1.9492 |
| TP (g/kg) | 0.7259 |
| TS (g/kg) | 5.0306 |
| TC (g/kg) | 48.9380 |
| Fe (mg/kg) | 33651.4778 |
| Mn (mg/kg) | 637.0690 |
| C/N | |
| IC (g/kg) | |
| MBC (g/kg) | 0.2501 |
| pH | 6.9700 |
| Water content (%) | 0.6569 |
| NO3- (mg/kg) | 0.7155 |
| NH4+ (mg/kg) | 1.8314 |
Location
Community profile
The microbial community profiled by MetaPhlAn4
MAGs40
The MAGs in SMP0110
| ID | Name | Taxonomy | Completeness | Contamination | GC | N50 | Size |
|---|---|---|---|---|---|---|---|
| MAG04192 | WLSH2_bin.1 | d__Bacteria;p__Campylobacterota;c__Campylobacteria;o__Campylobacterales;f__Sulfurimonadaceae;g__Sulfurimonas;s__ | 80.27 | 2.23 | 38.0 | 5,363 | 1,660,858 |
| MAG04193 | WLSH2_bin.11 | d__Bacteria;p__WOR-3;c__WOR-3;o__SM23-42;f__SM23-42;g__SM23-42;s__ | 99.87 | 1.01 | 60.0 | 20,019 | 2,065,232 |
| MAG04194 | WLSH2_bin.12 | d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Acidiferrobacterales;f__UBA6901;g__UBA6901;s__ | 71.86 | 3.62 | 62.0 | 14,357 | 1,931,256 |
| MAG04195 | WLSH2_bin.15 | d__Bacteria;p__Chloroflexota;c__Dehalococcoidia;o__GIF9;f__AB-539-J10;g__RBG-13-51-36;s__ | 60.67 | 0.99 | 51.0 | 5,447 | 1,173,753 |
| MAG04196 | WLSH2_bin.16 | d__Bacteria;p__Edwardsbacteria;c__AC1;o__AC1;f__EtOH8;g__UBA2226;s__ | 98.24 | 0.35 | 51.0 | 26,007 | 1,901,188 |
| MAG04197 | WLSH2_bin.17 | d__Bacteria;p__Pseudomonadota;c__Alphaproteobacteria;o__Micavibrionales;f__UBA2020;g__;s__ | 87.01 | 3.29 | 54.0 | 7,275 | 1,976,947 |
| MAG04198 | WLSH2_bin.2 | d__Bacteria;p__Bacteroidota_A;c__UBA10030;o__UBA10030;f__UBA10030;g__;s__ | 62.5 | 1.59 | 63.0 | 9,161 | 1,448,777 |
| MAG04199 | WLSH2_bin.20 | d__Bacteria;p__Pseudomonadota;c__Alphaproteobacteria;o__Paracaedibacterales;f__Paracaedibacteraceae;g__;s__ | 86.54 | 0.12 | 44.0 | 23,208 | 2,150,706 |
| MAG04200 | WLSH2_bin.21 | d__Bacteria;p__Desulfobacterota;c__DSWW01;o__DSWW01;f__DSWW01;g__S015-6;s__ | 84.78 | 5.08 | 60.0 | 5,484 | 4,140,324 |
| MAG04201 | WLSH2_bin.22 | d__Bacteria;p__Elusimicrobiota;c__Elusimicrobia;o__FEN-1173;f__FEN-1173;g__;s__ | 95.54 | 1.34 | 62.0 | 20,186 | 2,810,385 |
| MAG04202 | WLSH2_bin.23 | d__Bacteria;p__Chloroflexota;c__Anaerolineae;o__Anaerolineales;f__Villigracilaceae;g__Defluviilinea;s__ | 95.31 | 7.3 | 51.0 | 26,429 | 5,504,576 |
| MAG04203 | WLSH2_bin.26 | d__Bacteria;p__Omnitrophota;c__Koll11;o__Gygaellales;f__Profunditerraquicolaceae;g__UBA6249;s__ | 96.1 | 0.13 | 42.0 | 10,851 | 1,315,244 |
| MAG04204 | WLSH2_bin.29 | d__Bacteria;p__Omnitrophota;c__Koll11;o__Velamenicoccales;f__Velamenicoccaceae;g__;s__ | 92.02 | 0.25 | 51.0 | 19,295 | 1,770,058 |
| MAG04205 | WLSH2_bin.30 | d__Bacteria;p__Nitrospirota;c__Thermodesulfovibrionia;o__Thermodesulfovibrionales;f__SM23-35;g__JALHSV01;s__ | 88.96 | 0.16 | 49.0 | 8,720 | 1,527,179 |
| MAG04206 | WLSH2_bin.31 | d__Archaea;p__Thermoplasmatota;c__Thermoplasmata;o__UBA10834;f__UBA10834;g__UBA9653;s__ | 83.86 | 4.06 | 62.0 | 16,764 | 1,670,317 |
| MAG04207 | WLSH2_bin.32 | d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Chromatiales;f__Chromatiaceae;g__M0108;s__M0108 sp041307365 | 87.3 | 4.81 | 64.0 | 10,987 | 2,626,219 |
| MAG04208 | WLSH2_bin.33 | d__Bacteria;p__Desulfobacterota;c__WTBG01;o__CAIYCZ01;f__CAIYCZ01;g__JAPLIX01;s__ | 74.56 | 3.53 | 49.0 | 3,382 | 2,196,242 |
| MAG04209 | WLSH2_bin.34 | d__Archaea;p__Thermoplasmatota;c__Thermoplasmata;o__UBA10834;f__UBA10834;g__UBA9653;s__ | 89.18 | 3.47 | 64.0 | 53,359 | 1,835,765 |
| MAG04210 | WLSH2_bin.35 | d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Burkholderiales;f__Gallionellaceae;g__Sideroxyarcus;s__ | 72.08 | 2.66 | 57.0 | 5,395 | 2,117,989 |
| MAG04211 | WLSH2_bin.36 | d__Bacteria;p__Methylomirabilota;c__Methylomirabilia;o__Methylomirabilales;f__2-02-FULL-66-22;g__2-02-FULL-66-22;s__ | 70.52 | 0.97 | 67.0 | 5,140 | 2,363,470 |
| MAG04212 | WLSH2_bin.39 | d__Bacteria;p__Bacteroidota_A;c__UBA10030;o__UBA10030;f__SZUA-254;g__;s__ | 63.39 | 0.29 | 48.0 | 3,779 | 1,674,862 |
| MAG04213 | WLSH2_bin.43 | d__Bacteria;p__Myxococcota;c__Polyangia;o__Haliangiales;f__Haliangiaceae;g__NORP324;s__ | 89.33 | 3.42 | 59.0 | 7,633 | 5,763,998 |
| MAG04214 | WLSH2_bin.44 | d__Bacteria;p__Desulfobacterota_B;c__Binatia;o__DP-6;f__;g__;s__ | 62.46 | 1.47 | 62.0 | 14,199 | 3,168,561 |
| MAG04215 | WLSH2_bin.45 | d__Bacteria;p__Desulfobacterota;c__Syntrophia;o__Syntrophales;f__UBA2185;g__UBA2185;s__ | 89.16 | 4.27 | 47.0 | 11,072 | 2,611,590 |
| MAG04216 | WLSH2_bin.46 | d__Archaea;p__Thermoplasmatota;c__E2;o__DHVEG-1;f__DHVEG-1;g__SM1-50;s__ | 58.39 | 1.13 | 39.0 | 4,066 | 906,728 |
| MAG04217 | WLSH2_bin.48 | d__Bacteria;p__Desulfobacterota;c__Desulfobacteria;o__Desulfobacterales;f__UBA11574;g__UBA11574;s__ | 84.8 | 5.0 | 45.0 | 8,664 | 2,681,984 |
| MAG04218 | WLSH2_bin.5 | d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Crocinitomicaceae;g__JADJGJ01;s__ | 98.56 | 4.11 | 38.0 | 10,558 | 3,163,970 |
| MAG04219 | WLSH2_bin.51 | d__Bacteria;p__Pseudomonadota;c__Alphaproteobacteria;o__Rickettsiales;f__UBA6187;g__1-14-0-20-39-49;s__ | 91.43 | 0.06 | 50.0 | 42,669 | 1,976,343 |
| MAG04220 | WLSH2_bin.53 | d__Bacteria;p__Planctomycetota;c__UBA8108;o__UBA8108;f__SXIK01;g__;s__ | 64.26 | 1.43 | 65.0 | 3,003 | 4,661,096 |
| MAG04221 | WLSH2_bin.54 | d__Bacteria;p__Bacteroidota_A;c__UBA10030;o__UBA10030;f__SZUA-254;g__SZUA-254;s__ | 56.06 | 0.38 | 66.0 | 3,600 | 1,656,249 |
| MAG04222 | WLSH2_bin.55 | d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__Gemmatimonadales;f__GWC2-71-9;g__JBDGYW01;s__ | 73.88 | 3.07 | 60.0 | 8,256 | 4,143,653 |
| MAG04223 | WLSH2_bin.56 | d__Bacteria;p__Patescibacteriota;c__JAEDAM01;o__BD1-5;f__UBA2023;g__UBA1545;s__ | 75.22 | 4.9 | 42.0 | 2,212 | 813,084 |
| MAG04224 | WLSH2_bin.57 | d__Archaea;p__Asgardarchaeota;c__Thorarchaeia;o__Thorarchaeales;f__Thorarchaeaceae;g__MP8T-1;s__ | 88.85 | 3.82 | 48.0 | 9,212 | 2,883,616 |
| MAG04225 | WLSH2_bin.58 | d__Bacteria;p__Bacteroidota_A;c__UBA10030;o__UBA10030;f__UBA6906;g__;s__ | 81.63 | 0.59 | 63.0 | 7,419 | 1,798,498 |
| MAG04226 | WLSH2_bin.6 | d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Thiohalomonadales;f__Thiohalomonadaceae;g__DASWUD01;s__ | 83.68 | 2.03 | 63.0 | 4,795 | 2,276,667 |
| MAG04227 | WLSH2_bin.61 | d__Bacteria;p__Bdellovibrionota;c__Bdellovibrionia;o__Bdellovibrionales;f__Bdellovibrionaceae;g__Pseudobdellovibrio;s__ | 85.53 | 5.28 | 41.0 | 6,830 | 2,691,608 |
| MAG04228 | WLSH2_bin.62 | d__Archaea;p__Halobacteriota;c__Methanosarcinia;o__Methanotrichales;f__Methanotrichaceae;g__Methanothrix;s__ | 65.91 | 0.05 | 54.0 | 6,281 | 1,720,754 |
| MAG04229 | WLSH2_bin.63 | d__Bacteria;p__Desulfobacterota;c__DSWW01;o__DSWW01;f__DSWW01;g__S015-6;s__ | 97.84 | 8.12 | 59.0 | 14,505 | 5,377,193 |
| MAG04230 | WLSH2_bin.69 | d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Burkholderiales;f__SG8-41;g__Ga0077527;s__ | 67.01 | 1.5 | 63.0 | 9,450 | 1,615,342 |
| MAG04231 | WLSH2_bin.9 | d__Bacteria;p__Bacteroidota_A;c__UBA10030;o__UBA10030;f__UBA10030;g__JAKAJH01;s__JAKAJH01 sp025455125 | 81.71 | 4.19 | 58.0 | 4,221 | 3,009,809 |
| ID | Name | Taxonomy | Completeness | Contamination | GC | N50 | Size |