GWM
Global Wetland Microbiome Database
Overview
| ID | SMP0111 |
|---|---|
| Name | WLSH3 |
| Type | lake |
| Habitat | sediment |
| Country | China |
| Latitude and longitude | 40.998611 N 108.861667 E |
| Altitude (m) | 988.6 |
| Instrument | illumina NovaSeq X Plus |
| AvgSpotLen (bp) | 300 |
| LibraryLayout | PAIRED |
| Project | PRJNA1430164 |
| Collection Date | 2025-04-26 |
| Physicochemical properties | |
| TN (g/kg) | 2.7429 |
| TP (g/kg) | 0.5934 |
| TS (g/kg) | 9.1148 |
| TC (g/kg) | 63.8140 |
| Fe (mg/kg) | 29023.9726 |
| Mn (mg/kg) | 623.2877 |
| C/N | |
| IC (g/kg) | |
| MBC (g/kg) | 0.7728 |
| pH | 6.9000 |
| Water content (%) | 0.6571 |
| NO3- (mg/kg) | 6.0413 |
| NH4+ (mg/kg) | 1.8367 |
Location
Community profile
The microbial community profiled by MetaPhlAn4
MAGs49
The MAGs in SMP0111
| ID | Name | Taxonomy | Completeness | Contamination | GC | N50 | Size |
|---|---|---|---|---|---|---|---|
| MAG04232 | WLSH3_bin.12 | d__Bacteria;p__Desulfobacterota;c__DSWW01;o__DSWW01;f__DSWW01;g__S015-6;s__ | 81.22 | 5.02 | 60.0 | 5,550 | 3,830,669 |
| MAG04233 | WLSH3_bin.13 | d__Bacteria;p__Desulfobacterota;c__Syntrophobacteria;o__Syntrophobacterales;f__;g__;s__ | 73.47 | 1.74 | 56.0 | 6,839 | 2,525,906 |
| MAG04234 | WLSH3_bin.14 | d__Bacteria;p__Myxococcota;c__Polyangia;o__Haliangiales;f__Haliangiaceae;g__NORP324;s__ | 85.35 | 4.64 | 59.0 | 5,722 | 5,724,616 |
| MAG04235 | WLSH3_bin.15 | d__Archaea;p__Thermoplasmatota;c__Thermoplasmata;o__Methanomassiliicoccales;f__UBA472;g__UBA472;s__UBA472 sp041304605 | 74.52 | 4.76 | 59.0 | 1,858 | 1,310,242 |
| MAG04236 | WLSH3_bin.17 | d__Bacteria;p__Patescibacteriota;c__Patescibacteriia;o__SG8-24;f__SG8-24;g__JAYEJB01;s__ | 92.77 | 4.45 | 61.0 | 7,632 | 1,167,224 |
| MAG04237 | WLSH3_bin.18 | d__Bacteria;p__Edwardsbacteria;c__AC1;o__AC1;f__EtOH8;g__UBA2226;s__ | 93.23 | 3.72 | 51.0 | 24,154 | 1,993,298 |
| MAG04238 | WLSH3_bin.19 | d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Burkholderiales;f__Gallionellaceae;g__39-52-133;s__ | 88.3 | 1.46 | 53.0 | 26,209 | 2,709,323 |
| MAG04239 | WLSH3_bin.2 | d__Archaea;p__Halobacteriota;c__Methanomicrobia;o__Methanomicrobiales;f__Methanospirillaceae;g__Methanoregula;s__ | 89.36 | 6.55 | 50.0 | 11,432 | 2,163,022 |
| MAG04240 | WLSH3_bin.20 | d__Bacteria;p__Nitrospirota;c__Thermodesulfovibrionia;o__Thermodesulfovibrionales;f__SM23-35;g__JALHSV01;s__ | 76.99 | 3.24 | 49.0 | 4,526 | 1,262,067 |
| MAG04241 | WLSH3_bin.21 | d__Bacteria;p__Pseudomonadota;c__Alphaproteobacteria;o__Micavibrionales;f__UBA2020;g__;s__ | 96.83 | 6.88 | 54.0 | 10,432 | 2,347,785 |
| MAG04242 | WLSH3_bin.22 | d__Archaea;p__Thermoplasmatota;c__EX4484-6;o__EX4484-6;f__EX4484-6;g__JALOTP01;s__ | 83.27 | 2.01 | 57.0 | 6,160 | 2,379,203 |
| MAG04243 | WLSH3_bin.23 | d__Archaea;p__Thermoplasmatota;c__Thermoplasmata;o__UBA10834;f__UBA10834;g__UBA9653;s__ | 94.5 | 5.41 | 62.0 | 13,168 | 1,692,646 |
| MAG04244 | WLSH3_bin.24 | d__Bacteria;p__Chloroflexota;c__Dehalococcoidia;o__GIF9;f__AB-539-J10;g__RBG-13-51-36;s__ | 71.95 | 3.7 | 51.0 | 6,001 | 1,030,077 |
| MAG04245 | WLSH3_bin.25 | d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__SG8-11;f__SG8-11;g__UBA6921;s__ | 91.5 | 2.84 | 59.0 | 21,419 | 2,976,618 |
| MAG04246 | WLSH3_bin.26 | d__Bacteria;p__Omnitrophota;c__Koll11;o__Velamenicoccales;f__Velamenicoccaceae;g__;s__ | 92.35 | 1.63 | 51.0 | 7,388 | 1,842,827 |
| MAG04247 | WLSH3_bin.27 | d__Bacteria;p__Campylobacterota;c__Campylobacteria;o__Campylobacterales;f__Sulfurovaceae;g__BN30871;s__BN30871 sp001493195 | 59.87 | 0.69 | 33.0 | 2,547 | 964,197 |
| MAG04248 | WLSH3_bin.28 | d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Crocinitomicaceae;g__JADJGJ01;s__ | 75.86 | 1.23 | 38.0 | 4,191 | 2,290,144 |
| MAG04249 | WLSH3_bin.3 | d__Bacteria;p__Bacteroidota_A;c__UBA10030;o__UBA10030;f__UBA10030;g__JAKAJH01;s__JAKAJH01 sp025455125 | 92.64 | 1.13 | 58.0 | 7,090 | 3,242,442 |
| MAG04250 | WLSH3_bin.31 | d__Archaea;p__Asgardarchaeota;c__Thorarchaeia;o__Thorarchaeales;f__Thorarchaeaceae;g__JAWAQK01;s__ | 75.71 | 2.71 | 53.0 | 3,845 | 2,426,678 |
| MAG04251 | WLSH3_bin.33 | d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Burkholderiales;f__Gallionellaceae;g__39-52-133;s__ | 72.28 | 3.61 | 52.0 | 5,668 | 2,122,236 |
| MAG04252 | WLSH3_bin.35 | d__Bacteria;p__Acidobacteriota;c__Polarisedimenticolia;o__Polarisedimenticolales;f__JAIQFR01;g__CALMJU01;s__ | 87.7 | 4.27 | 68.0 | 6,861 | 2,676,703 |
| MAG04253 | WLSH3_bin.36 | d__Bacteria;p__Desulfobacterota;c__Desulfobacteria;o__Desulfobacterales;f__UBA11574;g__UBA11574;s__ | 97.83 | 6.31 | 45.0 | 12,250 | 3,133,216 |
| MAG04254 | WLSH3_bin.38 | d__Bacteria;p__Zixibacteria;c__MSB-5A5;o__GN15;f__FEB-12;g__GCA-020346225;s__ | 96.02 | 4.14 | 52.0 | 15,833 | 2,707,316 |
| MAG04255 | WLSH3_bin.39 | d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Acidiferrobacterales;f__UBA6901;g__UBA6901;s__ | 74.48 | 2.09 | 61.0 | 17,254 | 2,080,231 |
| MAG04256 | WLSH3_bin.4 | d__Bacteria;p__Bacteroidota_A;c__UBA10030;o__UBA10030;f__UBA6906;g__;s__ | 88.93 | 4.59 | 60.0 | 11,720 | 3,876,103 |
| MAG04257 | WLSH3_bin.41 | d__Bacteria;p__Desulfobacterota;c__Desulfobulbia;o__Desulfobulbales;f__Desulfobulbaceae;g__UBA10518;s__ | 72.81 | 3.98 | 56.0 | 6,126 | 2,831,246 |
| MAG04258 | WLSH3_bin.42 | d__Bacteria;p__Actinomycetota;c__Acidimicrobiia;o__UBA5794;f__UBA11373;g__;s__ | 67.86 | 2.65 | 71.0 | 4,131 | 1,760,473 |
| MAG04259 | WLSH3_bin.43 | d__Archaea;p__Asgardarchaeota;c__Thorarchaeia;o__Thorarchaeales;f__Thorarchaeaceae;g__MP8T-1;s__ | 92.25 | 5.74 | 48.0 | 47,798 | 3,076,451 |
| MAG04260 | WLSH3_bin.44 | d__Bacteria;p__Desulfobacterota;c__DSWW01;o__DSWW01;f__DSWW01;g__S015-6;s__ | 83.57 | 6.6 | 60.0 | 12,887 | 4,716,769 |
| MAG04261 | WLSH3_bin.45 | d__Bacteria;p__Bacteroidota_A;c__UBA10030;o__UBA10030;f__SZUA-254;g__;s__ | 100.0 | 2.21 | 47.0 | 26,065 | 3,017,797 |
| MAG04262 | WLSH3_bin.46 | d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Burkholderiales;f__Nitrosomonadaceae;g__Nitrosomonas;s__ | 79.9 | 4.77 | 45.0 | 6,419 | 2,304,694 |
| MAG04263 | WLSH3_bin.49 | d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Chromatiales;f__Chromatiaceae;g__M0108;s__M0108 sp041307365 | 67.67 | 0.95 | 65.0 | 5,414 | 1,943,720 |
| MAG04264 | WLSH3_bin.50 | d__Archaea;p__Thermoplasmatota;c__E2;o__DHVEG-1;f__DHVEG-1;g__SM1-50;s__ | 89.35 | 2.21 | 38.0 | 16,793 | 1,540,131 |
| MAG04265 | WLSH3_bin.51 | d__Bacteria;p__Bacteroidota_A;c__UBA10030;o__UBA10030;f__UBA10030;g__;s__ | 100.0 | 1.19 | 62.0 | 51,056 | 3,151,525 |
| MAG04266 | WLSH3_bin.52 | d__Bacteria;p__Bacteroidota_A;c__UBA10030;o__UBA10030;f__UBA6906;g__JAGDMK01;s__ | 97.44 | 3.77 | 59.0 | 18,154 | 4,632,490 |
| MAG04267 | WLSH3_bin.54 | d__Bacteria;p__Desulfobacterota;c__SM23-61;o__SM23-61;f__SM23-61;g__SM23-61;s__ | 74.03 | 4.34 | 56.0 | 4,203 | 3,125,717 |
| MAG04268 | WLSH3_bin.57 | d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__SG8-11;f__SG8-11;g__UBA6921;s__ | 82.28 | 2.34 | 59.0 | 8,513 | 2,571,409 |
| MAG04269 | WLSH3_bin.59 | d__Bacteria;p__Calditrichota;c__Calditrichia;o__JAJRVZ01;f__JAJRVZ01;g__;s__ | 62.99 | 1.58 | 47.0 | 3,604 | 2,833,524 |
| MAG04270 | WLSH3_bin.61 | d__Bacteria;p__Eisenbacteria;c__RBG-16-71-46;o__JABDJR01;f__JABDJR01;g__;s__ | 52.39 | 0.42 | 68.0 | 4,027 | 2,005,081 |
| MAG04271 | WLSH3_bin.64 | d__Archaea;p__Micrarchaeota;c__Micrarchaeia;o__Anstonellales;f__Bilamarchaeaceae;g__Bilamarchaeum;s__ | 71.76 | 3.16 | 58.0 | 5,980 | 1,095,124 |
| MAG04272 | WLSH3_bin.65 | d__Bacteria;p__Desulfobacterota;c__Syntrophia;o__Syntrophales;f__UBA2185;g__UBA2185;s__ | 98.89 | 5.55 | 47.0 | 11,958 | 2,859,318 |
| MAG04273 | WLSH3_bin.66 | d__Bacteria;p__Patescibacteriota;c__Minisyncoccia;o__UBA9973;f__UBA12088;g__UBA12088;s__ | 83.82 | 1.61 | 54.0 | 12,051 | 1,210,985 |
| MAG04274 | WLSH3_bin.7 | d__Bacteria;p__WOR-3;c__WOR-3;o__SM23-42;f__SM23-42;g__SM23-42;s__ | 95.95 | 0.55 | 60.0 | 11,298 | 1,963,005 |
| MAG04275 | WLSH3_bin.70 | d__Bacteria;p__Spirochaetota;c__UBA4802;o__UBA4802;f__UBA5368;g__;s__ | 96.28 | 5.15 | 60.0 | 10,836 | 3,916,515 |
| MAG04276 | WLSH3_bin.72 | d__Bacteria;p__Edwardsbacteria;c__AC1;o__AC1;f__EtOH8;g__UBA2226;s__ | 75.66 | 2.16 | 57.0 | 3,841 | 1,573,116 |
| MAG04277 | WLSH3_bin.77 | d__Bacteria;p__Bacteroidota_A;c__Ignavibacteria;o__Ignavibacteriales;f__Ignavibacteriaceae;g__JAGXRK01;s__ | 84.26 | 3.42 | 34.0 | 23,558 | 2,671,555 |
| MAG04278 | WLSH3_bin.79 | d__Bacteria;p__Desulfobacterota;c__Desulfuromonadia;o__Desulfuromonadales;f__BM103;g__VAUL01;s__ | 100.0 | 3.38 | 60.0 | 19,898 | 3,360,643 |
| MAG04279 | WLSH3_bin.8 | d__Bacteria;p__Acidobacteriota;c__Thermoanaerobaculia;o__UBA5066;f__UBA5066;g__UBA5066;s__ | 73.4 | 3.38 | 70.0 | 4,521 | 4,222,615 |
| MAG04280 | WLSH3_bin.81 | d__Archaea;p__Micrarchaeota;c__Micrarchaeia;o__Anstonellales;f__Bilamarchaeaceae;g__;s__ | 60.13 | 0.3 | 62.0 | 3,262 | 772,996 |
| ID | Name | Taxonomy | Completeness | Contamination | GC | N50 | Size |