GWM
Global Wetland Microbiome Database
Overview
| ID | SMP0118 |
|---|---|
| Name | XH1 |
| Type | lake |
| Habitat | sediment |
| Country | China |
| Latitude and longitude | 30.1475 N 120.216111 E |
| Altitude (m) | 27.0 |
| Instrument | illumina NovaSeq X Plus |
| AvgSpotLen (bp) | 300 |
| LibraryLayout | PAIRED |
| Project | PRJNA1430164 |
| Collection Date | |
| Physicochemical properties | |
| TN (g/kg) | 2.1784 |
| TP (g/kg) | 0.6768 |
| TS (g/kg) | 0.5352 |
| TC (g/kg) | 22.4000 |
| Fe (mg/kg) | 29229.1667 |
| Mn (mg/kg) | 689.3939 |
| C/N | 10.2830 |
| IC (g/kg) | 3.9990 |
| MBC (g/kg) | 0.2136 |
| pH | 7.6700 |
| Water content (%) | 0.6690 |
| NO3- (mg/kg) | |
| NH4+ (mg/kg) | 37.9738 |
Location
Community profile
The microbial community profiled by MetaPhlAn4
MAGs25
The MAGs in SMP0118
| ID | Name | Taxonomy | Completeness | Contamination | GC | N50 | Size |
|---|---|---|---|---|---|---|---|
| MAG04377 | XH1_bin.13 | d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Chitinophagales;f__Chitinophagaceae;g__JJ008;s__ | 86.85 | 3.96 | 40.0 | 4,764 | 2,796,126 |
| MAG04378 | XH1_bin.14 | d__Bacteria;p__Desulfobacterota;c__SM23-61;o__SM23-61;f__;g__;s__ | 79.88 | 5.61 | 58.0 | 6,664 | 3,078,261 |
| MAG04379 | XH1_bin.16 | d__Bacteria;p__Campylobacterota;c__Campylobacteria;o__Campylobacterales;f__Sulfurimonadaceae;g__Sulfuricurvum;s__ | 57.28 | 0.69 | 47.0 | 9,017 | 1,231,274 |
| MAG04380 | XH1_bin.17 | d__Bacteria;p__Desulfobacterota;c__Syntrophia;o__Syntrophales;f__UBA2185;g__UBA2185;s__ | 84.53 | 4.65 | 47.0 | 6,601 | 2,049,795 |
| MAG04381 | XH1_bin.18 | d__Bacteria;p__Bdellovibrionota;c__Bacteriovoracia;o__Bacteriovoracales;f__Bacteriovoracaceae;g__Bacteriovorax;s__ | 77.18 | 1.34 | 38.0 | 5,412 | 2,174,604 |
| MAG04382 | XH1_bin.20 | d__Bacteria;p__Omnitrophota;c__Koll11;o__2-01-FULL-45-10;f__2-01-FULL-45-10;g__JAFGJL01;s__ | 85.78 | 1.37 | 53.0 | 5,914 | 1,187,205 |
| MAG04383 | XH1_bin.22 | d__Bacteria;p__Nitrospirota;c__Thermodesulfovibrionia;o__Thermodesulfovibrionales;f__SM23-35;g__JALHSV01;s__ | 98.78 | 0.67 | 49.0 | 23,027 | 2,018,652 |
| MAG04384 | XH1_bin.23 | d__Bacteria;p__Planctomycetota;c__Phycisphaerae;o__Phycisphaerales;f__SM1A02;g__QWPT01;s__QWPT01 sp945902075 | 96.34 | 1.14 | 60.0 | 85,111 | 3,472,904 |
| MAG04385 | XH1_bin.25 | d__Bacteria;p__Desulfobacterota;c__Desulfomonilia;o__UBA1062;f__UBA1062;g__MWEI01;s__MWEI01 sp025454155 | 89.08 | 0.94 | 59.0 | 7,443 | 2,603,285 |
| MAG04386 | XH1_bin.27 | d__Bacteria;p__Nitrospirota;c__Nitrospiria;o__Nitrospirales;f__Nitrospiraceae;g__Nitrospira_D;s__ | 74.65 | 3.3 | 58.0 | 9,299 | 2,398,977 |
| MAG04387 | XH1_bin.28 | d__Archaea;p__Thermoplasmatota;c__E2;o__DHVEG-1;f__DHVEG-1;g__SM1-50;s__ | 89.61 | 1.58 | 39.0 | 8,364 | 1,436,215 |
| MAG04388 | XH1_bin.30 | d__Bacteria;p__Verrucomicrobiota;c__Verrucomicrobiia;o__Verrucomicrobiales;f__Akkermansiaceae;g__Luteolibacter;s__ | 93.22 | 3.29 | 57.0 | 10,899 | 2,284,201 |
| MAG04389 | XH1_bin.31 | d__Bacteria;p__Planctomycetota;c__UBA1135;o__UBA1135;f__GCA-002686595;g__SYGM01;s__SYGM01 sp005799545 | 89.17 | 0.04 | 67.0 | 19,303 | 3,528,285 |
| MAG04390 | XH1_bin.33 | d__Archaea;p__Thermoplasmatota;c__Thermoplasmata;o__UBA10834;f__UBA10834;g__UBA9653;s__ | 85.76 | 0.97 | 63.0 | 7,644 | 1,067,875 |
| MAG04391 | XH1_bin.35 | d__Bacteria;p__Chloroflexota;c__Dehalococcoidia;o__GIF9;f__UBA5629;g__CAIMUM01;s__ | 73.79 | 1.68 | 54.0 | 3,646 | 1,415,895 |
| MAG04392 | XH1_bin.38 | d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Chitinophagales;f__UBA10324;g__BJGO01;s__BJGO01 sp014190535 | 87.97 | 0.09 | 42.0 | 9,109 | 2,214,464 |
| MAG04393 | XH1_bin.39 | d__Bacteria;p__Planctomycetota;c__Phycisphaerae;o__Phycisphaerales;f__UBA1924;g__BJHL01;s__ | 61.28 | 1.24 | 64.0 | 4,319 | 2,546,656 |
| MAG04394 | XH1_bin.41 | d__Archaea;p__Thermoplasmatota;c__Thermoplasmata;o__Methanomassiliicoccales;f__UBA472;g__JAJRAN01;s__ | 60.89 | 0.79 | 59.0 | 2,546 | 779,494 |
| MAG04395 | XH1_bin.42 | d__Bacteria;p__Chloroflexota;c__Anaerolineae;o__Anaerolineales;f__Villigracilaceae;g__UBA5195;s__UBA5195 sp903875215 | 57.1 | 0.17 | 58.0 | 5,652 | 2,155,554 |
| MAG04396 | XH1_bin.43 | d__Bacteria;p__Spirochaetota;c__UBA4802;o__UBA4802;f__JAFGDQ01;g__JAFGSG01;s__ | 56.14 | 0.37 | 37.0 | 2,916 | 1,457,609 |
| MAG04397 | XH1_bin.46 | d__Bacteria;p__Planctomycetota;c__Phycisphaerae;o__Sedimentisphaerales;f__Anaerohalosphaeraceae;g__UBA7708;s__ | 62.22 | 0.92 | 52.0 | 3,011 | 1,358,178 |
| MAG04398 | XH1_bin.47 | d__Archaea;p__Halobacteriota;c__Methanomicrobia;o__Methanomicrobiales;f__Methanospirillaceae;g__MVRE01;s__ | 73.98 | 2.49 | 54.0 | 40,674 | 1,382,156 |
| MAG04399 | XH1_bin.49 | d__Bacteria;p__Omnitrophota;c__Koll11;o__Gygaellales;f__Profunditerraquicolaceae;g__DAONEO01;s__ | 91.78 | 1.66 | 51.0 | 10,857 | 2,001,183 |
| MAG04400 | XH1_bin.7 | d__Bacteria;p__Patescibacteriota;c__Gracilibacteria;o__UBA1369;f__UBA1369;g__;s__ | 79.58 | 3.22 | 50.0 | 6,345 | 1,012,110 |
| MAG04401 | XH1_bin.8 | d__Bacteria;p__Krumholzibacteriota;c__Krumholzibacteriia;o__Krumholzibacteriales;f__Krumholzibacteriaceae;g__SSS58A;s__ | 96.53 | 1.37 | 66.0 | 14,501 | 2,417,925 |
| ID | Name | Taxonomy | Completeness | Contamination | GC | N50 | Size |