GWM
Global Wetland Microbiome Database
Overview
| ID | SMP0120 |
|---|---|
| Name | XH3 |
| Type | lake |
| Habitat | sediment |
| Country | China |
| Latitude and longitude | 30.1475 N 120.216111 E |
| Altitude (m) | 27.0 |
| Instrument | illumina NovaSeq X Plus |
| AvgSpotLen (bp) | 300 |
| LibraryLayout | PAIRED |
| Project | PRJNA1430164 |
| Collection Date | |
| Physicochemical properties | |
| TN (g/kg) | 1.0308 |
| TP (g/kg) | 0.6009 |
| TS (g/kg) | 0.4667 |
| TC (g/kg) | 13.2600 |
| Fe (mg/kg) | 23408.3333 |
| Mn (mg/kg) | 573.9583 |
| C/N | 12.8642 |
| IC (g/kg) | 3.3143 |
| MBC (g/kg) | 0.1884 |
| pH | 7.4200 |
| Water content (%) | 0.5670 |
| NO3- (mg/kg) | |
| NH4+ (mg/kg) | 13.6947 |
Location
Community profile
The microbial community profiled by MetaPhlAn4
MAGs25
The MAGs in SMP0120
| ID | Name | Taxonomy | Completeness | Contamination | GC | N50 | Size |
|---|---|---|---|---|---|---|---|
| MAG04425 | XH3_bin.1 | d__Bacteria;p__Nitrospirota;c__Thermodesulfovibrionia;o__Thermodesulfovibrionales;f__;g__;s__ | 92.33 | 0.67 | 60.0 | 13,049 | 2,207,147 |
| MAG04426 | XH3_bin.12 | d__Bacteria;p__Nitrospirota;c__Thermodesulfovibrionia;o__Thermodesulfovibrionales;f__UBA9159;g__;s__ | 98.39 | 0.76 | 55.0 | 31,740 | 2,597,333 |
| MAG04427 | XH3_bin.14 | d__Bacteria;p__Nitrospirota;c__Thermodesulfovibrionia;o__Thermodesulfovibrionales;f__SM23-35;g__JALHSV01;s__ | 94.91 | 2.65 | 48.0 | 25,389 | 2,094,127 |
| MAG04428 | XH3_bin.18 | d__Bacteria;p__WOR-3;c__WOR-3;o__UBA2258;f__UBA2258;g__UBA2258;s__ | 58.85 | 1.49 | 63.0 | 3,919 | 1,404,644 |
| MAG04429 | XH3_bin.19 | d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Burkholderiales;f__UBA6910;g__UBA6910;s__ | 85.31 | 1.07 | 68.0 | 6,466 | 2,578,269 |
| MAG04430 | XH3_bin.20 | d__Bacteria;p__Bacteroidota_A;c__UBA10030;o__UBA10030;f__UBA10030;g__UBA9647;s__ | 90.98 | 1.26 | 54.0 | 6,075 | 2,728,958 |
| MAG04431 | XH3_bin.21 | d__Bacteria;p__Bacteroidota_A;c__UBA10030;o__UBA10030;f__UBA6906;g__;s__ | 70.94 | 3.0 | 67.0 | 7,978 | 2,441,067 |
| MAG04432 | XH3_bin.22 | d__Bacteria;p__Verrucomicrobiota;c__Verrucomicrobiia;o__Limisphaerales;f__JAFGQR01;g__JAFGQR01;s__ | 73.72 | 4.44 | 63.0 | 3,965 | 5,717,804 |
| MAG04433 | XH3_bin.23 | d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Acidiferrobacterales;f__UBA6901;g__UBA6901;s__ | 86.47 | 2.39 | 62.0 | 18,819 | 2,789,409 |
| MAG04434 | XH3_bin.25 | d__Archaea;p__Halobacteriota;c__Methanomicrobia;o__Methanomicrobiales;f__Methanospirillaceae;g__UBA9949;s__ | 62.79 | 1.21 | 55.0 | 4,515 | 1,058,118 |
| MAG04435 | XH3_bin.26 | d__Bacteria;p__Bacteroidota_A;c__UBA10030;o__UBA10030;f__UBA10030;g__JAKAJH01;s__ | 55.31 | 0.18 | 61.0 | 7,956 | 1,541,886 |
| MAG04436 | XH3_bin.28 | d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Burkholderiales;f__Casimicrobiaceae;g__CAIWHR01;s__ | 63.27 | 0.59 | 67.0 | 7,375 | 1,942,905 |
| MAG04437 | XH3_bin.30 | d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__VadinHA17;g__LD21;s__ | 74.43 | 1.62 | 47.0 | 4,969 | 2,428,983 |
| MAG04438 | XH3_bin.31 | d__Bacteria;p__Nitrospirota;c__Thermodesulfovibrionia;o__Thermodesulfovibrionales;f__;g__;s__ | 100.0 | 2.25 | 58.0 | 14,196 | 2,654,708 |
| MAG04439 | XH3_bin.32 | d__Bacteria;p__Nitrospirota;c__Thermodesulfovibrionia;o__SZUA-242;f__SZUA-242;g__;s__ | 91.08 | 6.18 | 61.0 | 7,189 | 2,716,872 |
| MAG04440 | XH3_bin.35 | d__Archaea;p__Thermoplasmatota;c__Thermoplasmata;o__UBA10834;f__UBA10834;g__JAJYIS01;s__ | 78.52 | 1.87 | 56.0 | 8,086 | 1,658,142 |
| MAG04441 | XH3_bin.36 | d__Bacteria;p__Chloroflexota;c__Dehalococcoidia;o__RBG-13-53-26;f__RBG-13-53-26;g__JAFGCL01;s__ | 70.22 | 1.93 | 59.0 | 3,604 | 1,117,966 |
| MAG04442 | XH3_bin.38 | d__Archaea;p__Thermoproteota;c__Methanomethylicia;o__Methanomethylicales;f__Methanomethylicaceae;g__JACTUC01;s__ | 94.69 | 1.12 | 58.0 | 10,617 | 1,194,160 |
| MAG04443 | XH3_bin.39 | d__Bacteria;p__Bacteroidota_A;c__UBA10030;o__UBA10030;f__UBA6906;g__UBA6906;s__ | 80.42 | 3.71 | 64.0 | 9,614 | 3,221,886 |
| MAG04444 | XH3_bin.4 | d__Bacteria;p__CLD3;c__CLD3;o__SB21;f__SB21;g__;s__ | 76.97 | 1.79 | 54.0 | 4,328 | 2,476,598 |
| MAG04445 | XH3_bin.40 | d__Bacteria;p__Bacteroidota_A;c__UBA10030;o__UBA10030;f__UBA10030;g__;s__ | 72.77 | 0.72 | 60.0 | 3,360 | 1,936,798 |
| MAG04446 | XH3_bin.41 | d__Bacteria;p__Chloroflexota;c__Anaerolineae;o__Anaerolineales;f__Villigracilaceae;g__Defluviilinea;s__ | 71.41 | 0.42 | 56.0 | 9,875 | 2,132,916 |
| MAG04447 | XH3_bin.42 | d__Bacteria;p__Acidobacteriota;c__Aminicenantia;o__Aminicenantales;f__RBG-16-66-30;g__RBG-16-66-30;s__ | 85.25 | 6.3 | 67.0 | 7,773 | 2,726,527 |
| MAG04448 | XH3_bin.6 | d__Bacteria;p__Desulfobacterota;c__Desulfobacteria;o__Desulfobacterales;f__UBA2174_A;g__SpSt-501;s__ | 80.86 | 4.22 | 60.0 | 5,286 | 3,532,132 |
| MAG04449 | XH3_bin.7 | d__Bacteria;p__Verrucomicrobiota;c__Verrucomicrobiia;o__Limisphaerales;f__UBA11358;g__WYBW01;s__ | 86.9 | 4.88 | 60.0 | 12,560 | 6,326,069 |
| ID | Name | Taxonomy | Completeness | Contamination | GC | N50 | Size |