GWM
Global Wetland Microbiome Database
Overview
| ID | SMP0122 |
|---|---|
| Name | YHH2 |
| Type | lake |
| Habitat | sediment |
| Country | China |
| Latitude and longitude | 38.531667 N 106.196944 E |
| Altitude (m) | 1069.0 |
| Instrument | illumina NovaSeq X Plus |
| AvgSpotLen (bp) | 300 |
| LibraryLayout | PAIRED |
| Project | PRJNA1430164 |
| Collection Date | 2025-04-27 |
| Physicochemical properties | |
| TN (g/kg) | 1.3177 |
| TP (g/kg) | 0.5582 |
| TS (g/kg) | 2.8427 |
| TC (g/kg) | 29.0310 |
| Fe (mg/kg) | 25204.3726 |
| Mn (mg/kg) | 424.9049 |
| C/N | |
| IC (g/kg) | |
| MBC (g/kg) | 0.6329 |
| pH | 6.9800 |
| Water content (%) | 0.4713 |
| NO3- (mg/kg) | 11.4585 |
| NH4+ (mg/kg) | 2.4169 |
Location
Community profile
The microbial community profiled by MetaPhlAn4
MAGs40
The MAGs in SMP0122
| ID | Name | Taxonomy | Completeness | Contamination | GC | N50 | Size |
|---|---|---|---|---|---|---|---|
| MAG04514 | YHH2_bin.1 | d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Acidiferrobacterales;f__UBA6901;g__UBA6901;s__ | 86.78 | 2.31 | 62.0 | 7,740 | 1,847,497 |
| MAG04515 | YHH2_bin.10 | d__Bacteria;p__Desulfobacterota;c__DSWW01;o__DSWW01;f__DSWW01;g__S015-6;s__ | 95.17 | 2.67 | 60.0 | 41,211 | 5,533,764 |
| MAG04516 | YHH2_bin.11 | d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__SKPS01;g__;s__ | 80.49 | 2.37 | 52.0 | 4,533 | 1,874,894 |
| MAG04517 | YHH2_bin.14 | d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Beggiatoales;f__Beggiatoaceae;g__;s__ | 98.56 | 0.36 | 43.0 | 47,661 | 3,436,341 |
| MAG04518 | YHH2_bin.17 | d__Bacteria;p__Patescibacteriota;c__Microgenomatia;o__UBA1400;f__RBG-16-45-19;g__;s__ | 81.49 | 5.83 | 47.0 | 5,712 | 1,354,916 |
| MAG04519 | YHH2_bin.19 | d__Bacteria;p__WOR-3;c__WOR-3;o__SM23-42;f__SM23-42;g__SM23-42;s__ | 75.96 | 2.32 | 60.0 | 3,540 | 1,332,294 |
| MAG04520 | YHH2_bin.20 | d__Bacteria;p__Chloroflexota;c__Anaerolineae;o__Anaerolineales;f__Villigracilaceae;g__Defluviilinea;s__ | 98.54 | 3.87 | 51.0 | 17,845 | 4,971,274 |
| MAG04521 | YHH2_bin.22 | d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__VadinHA17;g__SR-FBR-E99;s__ | 72.78 | 3.09 | 51.0 | 9,841 | 2,327,955 |
| MAG04522 | YHH2_bin.24 | d__Bacteria;p__Verrucomicrobiota;c__Kiritimatiellia;o__Kiritimatiellales;f__Pontiellaceae;g__Pontiella;s__ | 91.58 | 0.66 | 56.0 | 23,737 | 2,580,172 |
| MAG04523 | YHH2_bin.26 | d__Bacteria;p__Chloroflexota;c__Anaerolineae;o__Anaerolineales;f__Villigracilaceae;g__Denitrolinea;s__ | 72.92 | 1.16 | 53.0 | 10,108 | 2,654,529 |
| MAG04524 | YHH2_bin.31 | d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Burkholderiales;f__Gallionellaceae;g__Sideroxyarcus;s__ | 92.75 | 3.66 | 55.0 | 13,346 | 3,431,529 |
| MAG04525 | YHH2_bin.32 | d__Bacteria;p__Calditrichota;c__Calditrichia;o__RBG-13-44-9;f__RBG-13-44-9;g__RQOF01;s__ | 62.66 | 0.59 | 50.0 | 2,894 | 2,781,411 |
| MAG04526 | YHH2_bin.33 | d__Bacteria;p__Verrucomicrobiota;c__Verrucomicrobiia;o__Limisphaerales;f__DATENK01;g__DATENK01;s__ | 62.96 | 0.61 | 61.0 | 7,697 | 3,724,434 |
| MAG04527 | YHH2_bin.34 | d__Bacteria;p__Nitrospirota;c__Thermodesulfovibrionia;o__Thermodesulfovibrionales;f__SM23-35;g__JALHSV01;s__ | 99.85 | 0.11 | 48.0 | 22,833 | 2,143,252 |
| MAG04528 | YHH2_bin.35 | d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudohongiellaceae;g__NORP240;s__ | 80.58 | 1.6 | 59.0 | 10,433 | 2,380,118 |
| MAG04529 | YHH2_bin.36 | d__Bacteria;p__Calditrichota;c__Calditrichia;o__Calditrichales;f__;g__;s__ | 64.33 | 0.16 | 51.0 | 5,753 | 3,054,142 |
| MAG04530 | YHH2_bin.37 | d__Bacteria;p__Arandabacterota;c__Arandabacteria;o__Arandabacterales;f__Arandabacteraceae;g__DATKKY01;s__ | 59.92 | 0.17 | 64.0 | 2,504 | 1,306,453 |
| MAG04531 | YHH2_bin.38 | d__Bacteria;p__Zixibacteria;c__MSB-5A5;o__GN15;f__FEB-12;g__GCA-020346225;s__ | 97.26 | 5.65 | 52.0 | 13,630 | 2,732,367 |
| MAG04532 | YHH2_bin.39 | d__Bacteria;p__Desulfobacterota;c__Desulfobulbia;o__Desulfobulbales;f__Desulfobulbaceae;g__UBA10518;s__ | 100.0 | 1.88 | 56.0 | 33,444 | 3,329,456 |
| MAG04533 | YHH2_bin.4 | d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Chitinophagales;f__Saprospiraceae;g__JADJTT01;s__ | 94.5 | 3.65 | 53.0 | 18,888 | 5,429,381 |
| MAG04534 | YHH2_bin.40 | d__Bacteria;p__Nitrospirota;c__UBA9217;o__UBA9217;f__UBA9217;g__JAAXXJ01;s__ | 72.93 | 0.42 | 62.0 | 7,817 | 1,495,668 |
| MAG04535 | YHH2_bin.42 | d__Bacteria;p__Chloroflexota;c__Anaerolineae;o__Anaerolineales;f__Villigracilaceae;g__VGNO01;s__ | 88.52 | 0.52 | 56.0 | 21,663 | 3,965,193 |
| MAG04536 | YHH2_bin.43 | d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__VadinHA17;g__LD21;s__ | 96.15 | 0.2 | 42.0 | 41,865 | 4,199,472 |
| MAG04537 | YHH2_bin.46 | d__Bacteria;p__Elusimicrobiota;c__Elusimicrobia;o__FEN-1173;f__FEN-1173;g__;s__ | 60.18 | 0.83 | 61.0 | 4,837 | 1,722,357 |
| MAG04538 | YHH2_bin.48 | d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__SG8-11;f__SG8-11;g__UBA6921;s__ | 59.25 | 0.98 | 59.0 | 3,832 | 1,727,562 |
| MAG04539 | YHH2_bin.5 | d__Bacteria;p__Bacteroidota_A;c__UBA10030;o__UBA10030;f__UBA6906;g__JAGDMK01;s__ | 85.19 | 1.82 | 59.0 | 9,296 | 3,740,071 |
| MAG04540 | YHH2_bin.50 | d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__GCA-2748055;g__GCA-2748055;s__ | 89.64 | 3.49 | 49.0 | 6,677 | 3,823,011 |
| MAG04541 | YHH2_bin.51 | d__Bacteria;p__Margulisbacteria;c__WOR-1;o__O2-12-FULL-45-9;f__O2-12-FULL-45-9;g__JAYEOW01;s__ | 63.87 | 1.01 | 54.0 | 3,765 | 836,536 |
| MAG04542 | YHH2_bin.52 | d__Archaea;p__Nanobdellota;c__Nanobdellia;o__Woesearchaeales;f__JAGWAF01;g__;s__ | 72.01 | 0.77 | 45.0 | 3,540 | 723,430 |
| MAG04543 | YHH2_bin.53 | d__Archaea;p__Asgardarchaeota;c__Thorarchaeia;o__Thorarchaeales;f__Thorarchaeaceae;g__MP8T-1;s__ | 89.96 | 2.54 | 41.0 | 6,709 | 3,208,316 |
| MAG04544 | YHH2_bin.54 | d__Bacteria;p__Omnitrophota;c__Koll11;o__Zapsychrales;f__JANLHA01;g__;s__ | 70.11 | 0.21 | 54.0 | 3,699 | 1,615,585 |
| MAG04545 | YHH2_bin.56 | d__Archaea;p__Nanobdellota;c__Nanobdellia;o__Pacearchaeales;f__GW2011-AR1;g__JAOAJC01;s__ | 59.55 | 1.62 | 42.0 | 4,415 | 396,857 |
| MAG04546 | YHH2_bin.58 | d__Bacteria;p__Desulfobacterota;c__WTBG01;o__WTBG01;f__WTBG01;g__CALJBY01;s__ | 92.03 | 7.36 | 54.0 | 11,416 | 3,396,606 |
| MAG04547 | YHH2_bin.59 | d__Bacteria;p__Patescibacteriota;c__Minisyncoccia;o__UBA9973;f__DSPV01;g__2-02-FULL-46-13;s__ | 64.35 | 1.62 | 49.0 | 4,673 | 461,949 |
| MAG04548 | YHH2_bin.6 | d__Bacteria;p__Patescibacteriota;c__WWE3;o__UBA101185;f__UBA10185;g__MEUV01;s__ | 85.37 | 0.19 | 45.0 | 6,445 | 656,399 |
| MAG04549 | YHH2_bin.60 | d__Bacteria;p__Chloroflexota;c__Anaerolineae;o__Anaerolineales;f__Villigracilaceae;g__UBA877;s__ | 71.19 | 0.7 | 55.0 | 12,386 | 2,056,461 |
| MAG04550 | YHH2_bin.62 | d__Bacteria;p__Bacteroidota_A;c__UBA10030;o__UBA10030;f__SZUA-254;g__SZUA-254;s__ | 61.3 | 0.58 | 64.0 | 3,382 | 1,793,744 |
| MAG04551 | YHH2_bin.63 | d__Bacteria;p__Desulfobacterota;c__Syntrophobacteria;o__Syntrophobacterales;f__;g__;s__ | 96.97 | 7.49 | 56.0 | 8,016 | 4,441,549 |
| MAG04552 | YHH2_bin.64 | d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__Gemmatimonadales;f__GWC2-71-9;g__JBDGYW01;s__ | 93.0 | 2.26 | 60.0 | 27,769 | 5,934,471 |
| MAG04553 | YHH2_bin.7 | d__Bacteria;p__Omnitrophota;c__Koll11;o__Gygaellales;f__Profunditerraquicolaceae;g__;s__ | 74.18 | 0.08 | 59.0 | 6,475 | 1,386,445 |
| ID | Name | Taxonomy | Completeness | Contamination | GC | N50 | Size |