GWM
Global Wetland Microbiome Database
Overview
| ID | SMP0127 |
|---|---|
| Name | ZZS1 |
| Type | river |
| Habitat | sediment |
| Country | China |
| Latitude and longitude | 34.910556 N 113.652778 E |
| Altitude (m) | 92.0 |
| Instrument | illumina NovaSeq X Plus |
| AvgSpotLen (bp) | 300 |
| LibraryLayout | PAIRED |
| Project | PRJNA1430164 |
| Collection Date | |
| Physicochemical properties | |
| TN (g/kg) | 0.6736 |
| TP (g/kg) | 0.5777 |
| TS (g/kg) | 0.1464 |
| TC (g/kg) | 16.7600 |
| Fe (mg/kg) | 25305.2435 |
| Mn (mg/kg) | 497.1910 |
| C/N | 24.8806 |
| IC (g/kg) | 13.8840 |
| MBC (g/kg) | 0.1201 |
| pH | 8.4200 |
| Water content (%) | 0.1793 |
| NO3- (mg/kg) | 2.4227 |
| NH4+ (mg/kg) | 3.2965 |
Location
Community profile
The microbial community profiled by MetaPhlAn4
MAGs9
The MAGs in SMP0127
| ID | Name | Taxonomy | Completeness | Contamination | GC | N50 | Size |
|---|---|---|---|---|---|---|---|
| MAG04660 | ZZS1_bin.10 | d__Bacteria;p__Myxococcota;c__Polyangia;o__Polyangiales;f__Polyangiaceae;g__PMG-095;s__ | 93.68 | 7.14 | 66.0 | 16,864 | 9,093,496 |
| MAG04661 | ZZS1_bin.12 | d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__Gemmatimonadales;f__GWC2-71-9;g__JACDDX01;s__ | 79.13 | 3.35 | 65.0 | 8,145 | 2,933,136 |
| MAG04662 | ZZS1_bin.13 | d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Chitinophagales;f__Chitinophagaceae;g__Paraflavitalea;s__ | 65.92 | 2.48 | 48.0 | 3,675 | 4,901,910 |
| MAG04663 | ZZS1_bin.14 | d__Bacteria;p__Myxococcota;c__Polyangia;o__Polyangiales;f__Polyangiaceae;g__PMG-095;s__ | 80.03 | 3.13 | 68.0 | 5,795 | 6,150,683 |
| MAG04664 | ZZS1_bin.4 | d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__CADEEN01;s__ | 92.83 | 2.45 | 69.0 | 8,037 | 4,620,914 |
| MAG04665 | ZZS1_bin.5 | d__Bacteria;p__Actinomycetota;c__Actinomycetes;o__Mycobacteriales;f__SCTD01;g__RYN-111;s__ | 67.36 | 0.14 | 72.0 | 6,906 | 2,732,954 |
| MAG04666 | ZZS1_bin.7 | d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Chitinophagales;f__Chitinophagaceae;g__Edaphocola;s__ | 66.22 | 0.9 | 41.0 | 3,764 | 2,657,148 |
| MAG04667 | ZZS1_bin.8 | d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Burkholderiales;f__SG8-39;g__SCGC-AG-212-J23;s__SCGC-AG-212-J23 sp025929745 | 84.55 | 2.16 | 66.0 | 6,903 | 3,111,148 |
| MAG04668 | ZZS1_bin.9 | d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Pseudomonadales;f__Cellvibrionaceae;g__Cellvibrio;s__ | 91.72 | 2.66 | 49.0 | 13,149 | 4,401,293 |
| ID | Name | Taxonomy | Completeness | Contamination | GC | N50 | Size |