GWM
Global Wetland Microbiome Database
Overview
| ID | SMP0129 |
|---|---|
| Name | ZZS3 |
| Type | river |
| Habitat | sediment |
| Country | China |
| Latitude and longitude | 34.910556 N 113.652778 E |
| Altitude (m) | 92.0 |
| Instrument | illumina NovaSeq X Plus |
| AvgSpotLen (bp) | 300 |
| LibraryLayout | PAIRED |
| Project | PRJNA1430164 |
| Collection Date | |
| Physicochemical properties | |
| TN (g/kg) | 0.6996 |
| TP (g/kg) | 0.5489 |
| TS (g/kg) | 0.1212 |
| TC (g/kg) | 20.1400 |
| Fe (mg/kg) | 26924.2762 |
| Mn (mg/kg) | 435.4120 |
| C/N | 28.7885 |
| IC (g/kg) | 15.5932 |
| MBC (g/kg) | 0.1686 |
| pH | 8.1700 |
| Water content (%) | 0.1667 |
| NO3- (mg/kg) | 1.2147 |
| NH4+ (mg/kg) | 5.1166 |
Location
Community profile
The microbial community profiled by MetaPhlAn4
MAGs10
The MAGs in SMP0129
| ID | Name | Taxonomy | Completeness | Contamination | GC | N50 | Size |
|---|---|---|---|---|---|---|---|
| MAG04689 | ZZS3_bin.1 | d__Bacteria;p__Acidobacteriota;c__Blastocatellia;o__Pyrinomonadales;f__Pyrinomonadaceae;g__PSRF01;s__ | 99.52 | 1.39 | 52.0 | 25,856 | 5,200,442 |
| MAG04690 | ZZS3_bin.10 | d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__B-17B0;f__B-17BO;g__UBA4416;s__UBA4416 sp036676295 | 98.44 | 0.83 | 34.0 | 7,532 | 3,934,024 |
| MAG04691 | ZZS3_bin.11 | d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Ramlibacter;s__ | 72.32 | 2.95 | 70.0 | 11,974 | 3,388,799 |
| MAG04692 | ZZS3_bin.18 | d__Bacteria;p__Acidobacteriota;c__Blastocatellia;o__Pyrinomonadales;f__Pyrinomonadaceae;g__PSRF01;s__ | 95.05 | 5.97 | 56.0 | 18,215 | 5,673,189 |
| MAG04693 | ZZS3_bin.20 | d__Bacteria;p__Eisenbacteria;c__RBG-16-71-46;o__SZUA-252;f__SZUA-252;g__WS-9;s__ | 70.5 | 2.41 | 69.0 | 9,281 | 2,144,966 |
| MAG04694 | ZZS3_bin.3 | d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Chryseolinea;s__ | 72.31 | 0.88 | 43.0 | 5,073 | 4,655,373 |
| MAG04695 | ZZS3_bin.6 | d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__Gemmatimonadales;f__GWC2-71-9;g__JACDDX01;s__ | 88.12 | 3.5 | 65.0 | 41,885 | 3,312,938 |
| MAG04696 | ZZS3_bin.7 | d__Bacteria;p__Pseudomonadota;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Sphingomicrobium;s__Sphingomicrobium sp036378895 | 90.41 | 5.62 | 65.0 | 12,243 | 2,433,990 |
| MAG04697 | ZZS3_bin.8 | d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Burkholderiales;f__SG8-39;g__SCGC-AG-212-J23;s__SCGC-AG-212-J23 sp025929745 | 75.27 | 5.0 | 66.0 | 10,574 | 3,165,650 |
| MAG04698 | ZZS3_bin.9 | d__Bacteria;p__Acidobacteriota;c__Thermoanaerobaculia;o__UBA5066;f__Gp7-AA6;g__Gp7-AA6;s__ | 94.5 | 0.54 | 69.0 | 10,971 | 3,309,202 |
| ID | Name | Taxonomy | Completeness | Contamination | GC | N50 | Size |