GWM
Global Wetland Microbiome Database
Overview
| ID | SMP0142 |
|---|---|
| Name | SRR25158312 |
| Type | unclassified |
| Habitat | soil |
| Country | China |
| Latitude and longitude | 30.39 N 121.28 E |
| Altitude (m) | |
| Instrument | Illumina HiSeq 4000 |
| AvgSpotLen (bp) | 295 |
| LibraryLayout | PAIRED |
| Project | PRJNA983538 |
| Collection Date |
Location
Community profile
The microbial community profiled by MetaPhlAn4
MAGs15
The MAGs in SMP0142
| ID | Name | Taxonomy | Completeness | Contamination | GC | N50 | Size |
|---|---|---|---|---|---|---|---|
| MAG04811 | SRR25158312_bin.1 | d__Bacteria;p__Cyanobacteriota;c__Cyanobacteriia;o__Cyanobacteriales;f__Microcoleaceae;g__Planktothrix;s__Planktothrix agardhii | 64.28 | 1.71 | 40.0 | 1,874 | 2,685,346 |
| MAG04812 | SRR25158312_bin.10 | d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__UBA7662;f__UBA7662;g__SYHX01;s__SYHX01 sp009926245 | 95.95 | 1.41 | 53.0 | 6,076 | 1,669,876 |
| MAG04813 | SRR25158312_bin.11 | d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Burkholderiales;f__SG8-39;g__JAABQT01;s__JAABQT01 sp035459025 | 100.0 | 0.35 | 69.0 | 17,328 | 3,206,942 |
| MAG04814 | SRR25158312_bin.12 | d__Archaea;p__Thermoproteota;c__Nitrososphaeria;o__Nitrososphaerales;f__Nitrosopumilaceae;g__Nitrosopumilus;s__Nitrosopumilus sp035458995 | 95.09 | 0.3 | 34.0 | 24,546 | 1,409,710 |
| MAG04815 | SRR25158312_bin.16 | d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Eutrophobiales;f__Eutrophobiaceae;g__SZUA-592;s__SZUA-592 sp041556555 | 85.08 | 0.57 | 49.0 | 4,838 | 1,666,342 |
| MAG04816 | SRR25158312_bin.17 | d__Bacteria;p__Planctomycetota;c__Planctomycetia;o__Planctomycetales;f__Planctomycetaceae;g__SXXK01;s__SXXK01 sp005791255 | 99.03 | 0.34 | 59.0 | 13,564 | 6,023,206 |
| MAG04817 | SRR25158312_bin.18 | d__Bacteria;p__Actinomycetota;c__Actinomycetes;o__Nanopelagicales;f__Nanopelagicaceae;g__Planktophila;s__ | 75.69 | 0.08 | 47.0 | 7,963 | 1,039,873 |
| MAG04818 | SRR25158312_bin.19 | d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Enterobacterales;f__Alteromonadaceae;g__Rheinheimera;s__ | 88.28 | 4.0 | 48.0 | 4,742 | 2,506,645 |
| MAG04819 | SRR25158312_bin.2 | d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Pseudomonadales;f__Balneatricaceae;g__Marinobacterium_E;s__Marinobacterium_E sp035458585 | 93.34 | 1.1 | 52.0 | 27,778 | 2,899,711 |
| MAG04820 | SRR25158312_bin.3 | d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Pseudomonadales;f__Balneatricaceae;g__Motiliproteus;s__ | 83.26 | 3.74 | 60.0 | 5,652 | 2,672,224 |
| MAG04821 | SRR25158312_bin.4 | d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Steroidobacterales;f__Steroidobacteraceae;g__UBA964;s__ | 59.8 | 0.6 | 60.0 | 2,375 | 1,508,485 |
| MAG04822 | SRR25158312_bin.5 | d__Bacteria;p__Chloroflexota;c__Anaerolineae;o__Anaerolineales;f__UBA4823;g__DATCYX01;s__DATCYX01 sp036526235 | 86.51 | 3.78 | 53.0 | 5,322 | 3,688,210 |
| MAG04823 | SRR25158312_bin.6 | d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Pseudomonadales;f__JAHEIH01;g__JAHEIH01;s__JAHEIH01 sp035458985 | 97.73 | 0.84 | 50.0 | 29,746 | 2,545,037 |
| MAG04824 | SRR25158312_bin.8 | d__Archaea;p__Thermoproteota;c__Nitrososphaeria;o__Nitrososphaerales;f__Nitrosopumilaceae;g__Nitrosopumilus;s__Nitrosopumilus sp036525555 | 96.01 | 0.04 | 34.0 | 32,629 | 1,342,930 |
| MAG04825 | SRR25158312_bin.9 | d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__UBA2463;s__UBA2463 sp945862305 | 77.74 | 4.24 | 63.0 | 2,816 | 1,062,894 |
| ID | Name | Taxonomy | Completeness | Contamination | GC | N50 | Size |