GWM
Global Wetland Microbiome Database
Overview
| ID | SMP0145 |
|---|---|
| Name | SRR25158338 |
| Type | unclassified |
| Habitat | soil |
| Country | China |
| Latitude and longitude | 30.59 N 121.17 E |
| Altitude (m) | |
| Instrument | Illumina HiSeq 4000 |
| AvgSpotLen (bp) | 295 |
| LibraryLayout | PAIRED |
| Project | PRJNA983538 |
| Collection Date |
Location
Community profile
The microbial community profiled by MetaPhlAn4
MAGs40
The MAGs in SMP0145
| ID | Name | Taxonomy | Completeness | Contamination | GC | N50 | Size |
|---|---|---|---|---|---|---|---|
| MAG04851 | SRR25158338_bin.10 | d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__AKS1;f__AKS1;g__;s__ | 66.96 | 0.77 | 59.0 | 5,064 | 1,571,310 |
| MAG04852 | SRR25158338_bin.11 | d__Bacteria;p__Verrucomicrobiota;c__Verrucomicrobiia;o__Verrucomicrobiales;f__Akkermansiaceae;g__SW10;s__ | 76.14 | 2.31 | 63.0 | 4,975 | 3,347,158 |
| MAG04853 | SRR25158338_bin.12 | d__Bacteria;p__Actinomycetota;c__Nitriliruptoria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__;s__ | 60.99 | 1.37 | 70.0 | 6,288 | 2,280,479 |
| MAG04854 | SRR25158338_bin.13 | d__Bacteria;p__Chloroflexota;c__Dehalococcoidia;o__SM23-28-2;f__RBG-16-64-32;g__CF-162;s__ | 72.54 | 0.88 | 66.0 | 16,119 | 1,620,091 |
| MAG04855 | SRR25158338_bin.14 | d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Pseudomonadales;f__Azotimanducaceae;g__;s__ | 71.03 | 2.6 | 71.0 | 6,187 | 3,262,826 |
| MAG04856 | SRR25158338_bin.15 | d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Acidiferrobacterales;f__Sulfurifustaceae;g__Sulfuricaulis;s__Sulfuricaulis sp036526015 | 72.78 | 2.02 | 58.0 | 8,101 | 1,875,570 |
| MAG04857 | SRR25158338_bin.16 | d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas ventosae | 90.34 | 3.48 | 69.0 | 12,501 | 3,238,737 |
| MAG04858 | SRR25158338_bin.17 | d__Bacteria;p__Acidobacteriota;c__Vicinamibacteria;o__Vicinamibacterales;f__SCN-69-37;g__DATKDF01;s__ | 71.9 | 0.37 | 68.0 | 4,666 | 2,664,595 |
| MAG04859 | SRR25158338_bin.18 | d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Woeseiales;f__Woeseiaceae;g__JAACFB01;s__JAACFB01 sp041572475 | 87.24 | 3.99 | 64.0 | 39,978 | 2,293,260 |
| MAG04860 | SRR25158338_bin.19 | d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Eutrophobiales;f__Eutrophobiaceae;g__SZUA-592;s__SZUA-592 sp041556555 | 89.97 | 0.77 | 49.0 | 10,463 | 1,845,430 |
| MAG04861 | SRR25158338_bin.2 | d__Bacteria;p__Chloroflexota;c__Anaerolineae;o__Anaerolineales;f__Villigracilaceae;g__Fen-1038;s__Fen-1038 sp035471605 | 85.54 | 0.39 | 63.0 | 5,529 | 2,346,246 |
| MAG04862 | SRR25158338_bin.20 | d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Quisquiliibacterium;s__Quisquiliibacterium sp036525975 | 96.91 | 0.76 | 71.0 | 32,240 | 3,207,425 |
| MAG04863 | SRR25158338_bin.22 | d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__Longimicrobiales;f__UBA6960;g__IDS-52;s__ | 75.55 | 2.53 | 71.0 | 5,535 | 3,039,049 |
| MAG04864 | SRR25158338_bin.27 | d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__Gemmatimonadales;f__GWC2-71-9;g__SZUA-320;s__ | 63.15 | 0.62 | 70.0 | 4,407 | 2,105,750 |
| MAG04865 | SRR25158338_bin.29 | d__Bacteria;p__Pseudomonadota;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Andeanibacterium;s__ | 80.98 | 3.75 | 64.0 | 6,677 | 2,439,291 |
| MAG04866 | SRR25158338_bin.3 | d__Bacteria;p__Chloroflexota;c__Limnocylindria;o__Limnocylindrales;f__CSP1-4;g__UBA5189;s__ | 80.76 | 5.05 | 72.0 | 5,984 | 2,181,574 |
| MAG04867 | SRR25158338_bin.31 | d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Burkholderiales;f__SG8-41;g__CAKKQX01;s__ | 89.9 | 3.27 | 59.0 | 14,912 | 3,247,831 |
| MAG04868 | SRR25158338_bin.32 | d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Enterobacterales;f__Alteromonadaceae;g__Pseudidiomarina;s__ | 67.95 | 3.46 | 49.0 | 2,523 | 1,674,508 |
| MAG04869 | SRR25158338_bin.33 | d__Bacteria;p__Actinomycetota;c__Acidimicrobiia;o__UBA5794;f__JAHEDJ01;g__JAHEDJ01;s__JAHEDJ01 sp035471805 | 95.9 | 0.0 | 64.0 | 57,908 | 2,916,534 |
| MAG04870 | SRR25158338_bin.34 | d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__UBA9214;f__UBA9214;g__UBA9214;s__UBA9214 sp029881775 | 90.55 | 0.11 | 58.0 | 24,558 | 2,068,819 |
| MAG04871 | SRR25158338_bin.35 | d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Woeseiales;f__Woeseiaceae;g__UBA1847;s__UBA1847 sp036525955 | 78.97 | 2.35 | 64.0 | 24,747 | 2,754,128 |
| MAG04872 | SRR25158338_bin.36 | d__Bacteria;p__Chloroflexota;c__Limnocylindria;o__Limnocylindrales;f__CSP1-4;g__DATHYZ01;s__DATHYZ01 sp035458865 | 71.35 | 0.49 | 73.0 | 13,112 | 2,420,545 |
| MAG04873 | SRR25158338_bin.37 | d__Bacteria;p__Verrucomicrobiota;c__Verrucomicrobiia;o__Opitutales;f__Coraliomargaritaceae;g__Lentimonas;s__ | 66.25 | 0.18 | 48.0 | 4,158 | 1,323,348 |
| MAG04874 | SRR25158338_bin.38 | d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Burkholderiales;f__SG8-41;g__SG8-41;s__SG8-41 sp001303585 | 73.0 | 2.76 | 63.0 | 9,565 | 2,866,303 |
| MAG04875 | SRR25158338_bin.39 | d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__CAISIP01;s__ | 97.94 | 0.05 | 66.0 | 12,942 | 4,504,955 |
| MAG04876 | SRR25158338_bin.4 | d__Bacteria;p__Pseudomonadota;c__Alphaproteobacteria;o__Kiloniellales;f__CECT-8803;g__JARRJC01;s__ | 79.05 | 0.14 | 65.0 | 10,367 | 2,168,419 |
| MAG04877 | SRR25158338_bin.40 | d__Bacteria;p__Pseudomonadota;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pseudorhodobacter_B;s__ | 94.26 | 2.44 | 61.0 | 10,746 | 2,936,786 |
| MAG04878 | SRR25158338_bin.43 | d__Bacteria;p__Pseudomonadota;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__RFZI01;s__RFZI01 sp041546005 | 88.7 | 2.72 | 62.0 | 5,105 | 2,203,843 |
| MAG04879 | SRR25158338_bin.44 | d__Bacteria;p__Cyanobacteriota;c__Cyanobacteriia;o__Cyanobacteriales;f__MRBY01;g__Limnothrix;s__ | 74.62 | 4.47 | 46.0 | 4,869 | 3,343,513 |
| MAG04880 | SRR25158338_bin.45 | d__Bacteria;p__Pseudomonadota;c__Alphaproteobacteria;o__UBA8366;f__JADFVY01;g__JADFVY01;s__ | 94.84 | 2.66 | 63.0 | 54,830 | 4,237,854 |
| MAG04881 | SRR25158338_bin.46 | d__Bacteria;p__Actinomycetota;c__Acidimicrobiia;o__UBA5794;f__ZC4RG35;g__DATCZS01;s__DATCZS01 sp036525795 | 95.4 | 4.61 | 68.0 | 36,869 | 2,881,333 |
| MAG04882 | SRR25158338_bin.47 | d__Bacteria;p__Desulfobacterota_E;c__Deferrimicrobia;o__Deferrimicrobiales;f__Deferrimicrobiaceae;g__CSP1-8;s__CSP1-8 sp035763765 | 73.42 | 0.5 | 64.0 | 6,419 | 1,196,929 |
| MAG04883 | SRR25158338_bin.49 | d__Bacteria;p__Myxococcota;c__Bradymonadia;o__Bradymonadales;f__Bradymonadaceae;g__;s__ | 81.98 | 2.29 | 66.0 | 9,559 | 5,308,646 |
| MAG04884 | SRR25158338_bin.50 | d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Pseudomonadales;f__Natronospirillaceae;g__Saccharospirillum;s__ | 90.26 | 0.15 | 57.0 | 13,299 | 3,517,005 |
| MAG04885 | SRR25158338_bin.52 | d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Zeimonas;s__ | 65.39 | 2.29 | 69.0 | 5,357 | 2,169,364 |
| MAG04886 | SRR25158338_bin.55 | d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__Longimicrobiales;f__UBA6960;g__SZUA-318;s__SZUA-318 sp035458765 | 90.27 | 4.21 | 68.0 | 18,520 | 3,815,805 |
| MAG04887 | SRR25158338_bin.56 | d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Acidiferrobacterales;f__Sulfurifustaceae;g__Sulfuricaulis;s__ | 88.66 | 2.18 | 58.0 | 18,693 | 2,241,721 |
| MAG04888 | SRR25158338_bin.57 | d__Bacteria;p__Pseudomonadota;c__Alphaproteobacteria;o__Kiloniellales;f__CECT-8803;g__JARRJC01;s__ | 86.22 | 5.54 | 68.0 | 7,181 | 2,387,421 |
| MAG04889 | SRR25158338_bin.61 | d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Woeseiales;f__Woeseiaceae;g__JAHEFE01;s__JAHEFE01 sp036526055 | 67.6 | 1.85 | 59.0 | 7,383 | 1,635,403 |
| MAG04890 | SRR25158338_bin.9 | d__Bacteria;p__Actinomycetota;c__Thermoleophilia;o__Gaiellales;f__Gaiellaceae;g__GMQP-bins7;s__GMQP-bins7 sp041557575 | 83.91 | 0.39 | 71.0 | 11,131 | 2,146,391 |
| ID | Name | Taxonomy | Completeness | Contamination | GC | N50 | Size |