GWM
Global Wetland Microbiome Database
Overview
| ID | SMP0148 |
|---|---|
| Name | SRR25158342 |
| Type | unclassified |
| Habitat | soil |
| Country | China |
| Latitude and longitude | 30.59 N 121.13 E |
| Altitude (m) | |
| Instrument | Illumina HiSeq 4000 |
| AvgSpotLen (bp) | 295 |
| LibraryLayout | PAIRED |
| Project | PRJNA983538 |
| Collection Date |
Location
Community profile
The microbial community profiled by MetaPhlAn4
MAGs12
The MAGs in SMP0148
| ID | Name | Taxonomy | Completeness | Contamination | GC | N50 | Size |
|---|---|---|---|---|---|---|---|
| MAG04932 | SRR25158342_bin.1 | d__Archaea;p__Thermoproteota;c__Nitrososphaeria;o__Nitrososphaerales;f__Nitrosopumilaceae;g__Nitrosopumilus;s__Nitrosopumilus sp036525555 | 98.62 | 0.34 | 34.0 | 35,073 | 1,516,113 |
| MAG04933 | SRR25158342_bin.10 | d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Enterobacterales;f__Alteromonadaceae;g__Rheinheimera;s__ | 81.88 | 1.43 | 49.0 | 3,669 | 2,093,979 |
| MAG04934 | SRR25158342_bin.11 | d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Flavobacteriaceae;g__Yeosuana;s__Yeosuana sp036525815 | 90.05 | 0.48 | 33.0 | 12,126 | 2,620,253 |
| MAG04935 | SRR25158342_bin.12 | d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Pseudomonadales;f__JAHEIH01;g__JAHEIH01;s__JAHEIH01 sp035458985 | 93.42 | 0.87 | 50.0 | 12,727 | 2,261,258 |
| MAG04936 | SRR25158342_bin.13 | d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Pseudomonadales;f__Azotimanducaceae;g__UBA2965;s__UBA2965 sp036526135 | 83.36 | 3.22 | 65.0 | 4,360 | 3,030,080 |
| MAG04937 | SRR25158342_bin.14 | d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Eutrophobiales;f__Eutrophobiaceae;g__SZUA-592;s__SZUA-592 sp041556555 | 92.86 | 0.73 | 49.0 | 15,275 | 1,927,648 |
| MAG04938 | SRR25158342_bin.15 | d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Burkholderiales;f__Rhodocyclaceae;g__;s__ | 85.66 | 3.69 | 65.0 | 8,087 | 2,419,432 |
| MAG04939 | SRR25158342_bin.4 | d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__UBA9214;f__UBA9214;g__UBA9214;s__UBA9214 sp029881775 | 67.19 | 1.05 | 59.0 | 4,215 | 1,304,620 |
| MAG04940 | SRR25158342_bin.5 | d__Archaea;p__Thermoproteota;c__Nitrososphaeria;o__Nitrososphaerales;f__Nitrosopumilaceae;g__Nitrosopumilus;s__Nitrosopumilus sp035458995 | 79.5 | 0.13 | 34.0 | 14,425 | 1,118,298 |
| MAG04941 | SRR25158342_bin.6 | d__Bacteria;p__Verrucomicrobiota;c__Verrucomicrobiia;o__Verrucomicrobiales;f__Akkermansiaceae;g__Luteolibacter;s__ | 85.0 | 2.82 | 61.0 | 6,156 | 3,208,225 |
| MAG04942 | SRR25158342_bin.8 | d__Bacteria;p__Chloroflexota;c__Anaerolineae;o__Anaerolineales;f__UBA4823;g__DATCYX01;s__DATCYX01 sp036526235 | 86.62 | 3.35 | 53.0 | 5,397 | 3,526,232 |
| MAG04943 | SRR25158342_bin.9 | d__Bacteria;p__Campylobacterota;c__Campylobacteria;o__Campylobacterales;f__Arcobacteraceae;g__Marinarcus;s__ | 70.5 | 1.55 | 33.0 | 2,903 | 1,416,632 |
| ID | Name | Taxonomy | Completeness | Contamination | GC | N50 | Size |