GWM
Global Wetland Microbiome Database
Overview
| ID | SMP0149 |
|---|---|
| Name | SRR25158343 |
| Type | unclassified |
| Habitat | soil |
| Country | China |
| Latitude and longitude | 30.59 N 121.12 E |
| Altitude (m) | |
| Instrument | Illumina HiSeq 4000 |
| AvgSpotLen (bp) | 295 |
| LibraryLayout | PAIRED |
| Project | PRJNA983538 |
| Collection Date |
Location
Community profile
The microbial community profiled by MetaPhlAn4
MAGs30
The MAGs in SMP0149
| ID | Name | Taxonomy | Completeness | Contamination | GC | N50 | Size |
|---|---|---|---|---|---|---|---|
| MAG04944 | SRR25158343_bin.1 | d__Bacteria;p__Patescibacteriota;c__Minisyncoccia;o__UBA9973;f__UBA918;g__JACQKD01;s__ | 91.17 | 3.9 | 50.0 | 3,473 | 643,016 |
| MAG04945 | SRR25158343_bin.11 | d__Bacteria;p__Verrucomicrobiota;c__Verrucomicrobiia;o__Chthoniobacterales;f__UBA10450;g__Palsa-1392;s__ | 61.44 | 2.09 | 60.0 | 3,337 | 2,096,948 |
| MAG04946 | SRR25158343_bin.12 | d__Bacteria;p__Patescibacteriota;c__Minisyncoccia;o__UBA9973;f__CALRBL01;g__;s__ | 94.59 | 0.39 | 40.0 | 14,534 | 598,916 |
| MAG04947 | SRR25158343_bin.13 | d__Bacteria;p__Pseudomonadota;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Sphingomicrobium;s__ | 83.09 | 4.06 | 63.0 | 11,297 | 2,431,609 |
| MAG04948 | SRR25158343_bin.14 | d__Bacteria;p__Cyanobacteriota;c__Cyanobacteriia;o__Cyanobacteriales;f__Coleofasciculaceae;g__CADCTM01;s__ | 100.0 | 0.0 | 43.0 | 97,591 | 6,052,508 |
| MAG04949 | SRR25158343_bin.15 | d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__Gemmatimonadales;f__Gemmatimonadaceae;g__AG2;s__ | 88.5 | 2.57 | 69.0 | 9,827 | 3,614,922 |
| MAG04950 | SRR25158343_bin.16 | d__Bacteria;p__Armatimonadota;c__Armatimonadia;o__Armatimonadales;f__Armatimonadaceae;g__;s__ | 63.35 | 0.61 | 62.0 | 2,649 | 3,302,298 |
| MAG04951 | SRR25158343_bin.18 | d__Bacteria;p__Patescibacteriota;c__Saccharimonadia;o__Saccharimonadales;f__UBA4665;g__JBBRXZ01;s__ | 84.31 | 0.0 | 49.0 | 8,942 | 589,032 |
| MAG04952 | SRR25158343_bin.19 | d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Xanthomonadales;f__Xanthomonadaceae;g__Lysobacter_I;s__Lysobacter_I sp040386495 | 98.34 | 0.69 | 65.0 | 337,893 | 4,481,318 |
| MAG04953 | SRR25158343_bin.2 | d__Bacteria;p__Patescibacteriota;c__Saccharimonadia;o__Saccharimonadales;f__UBA4665;g__JARIHD01;s__ | 98.02 | 0.44 | 51.0 | 40,719 | 1,485,449 |
| MAG04954 | SRR25158343_bin.20 | d__Bacteria;p__Bacteroidota_A;c__Rhodothermia;o__Rhodothermales;f__Rubricoccaceae;g__Rubrivirga;s__ | 98.75 | 0.13 | 72.0 | 212,809 | 4,408,783 |
| MAG04955 | SRR25158343_bin.21 | d__Bacteria;p__Actinomycetota;c__Acidimicrobiia;o__Acidimicrobiales;f__AC-14;g__CADCTB01;s__ | 89.5 | 4.07 | 72.0 | 15,150 | 4,279,370 |
| MAG04956 | SRR25158343_bin.23 | d__Bacteria;p__Actinomycetota;c__Rubrobacteria;o__Rubrobacterales;f__Rubrobacteraceae;g__Rubrobacter_D;s__ | 88.05 | 4.41 | 63.0 | 10,436 | 3,777,297 |
| MAG04957 | SRR25158343_bin.25 | d__Bacteria;p__Patescibacteriota;c__Saccharimonadia;o__Saccharimonadales;f__UBA5946;g__UBA5946;s__ | 90.89 | 4.28 | 54.0 | 4,217 | 699,267 |
| MAG04958 | SRR25158343_bin.27 | d__Bacteria;p__Actinomycetota;c__Rubrobacteria;o__Rubrobacterales;f__Rubrobacteraceae;g__;s__ | 53.72 | 0.66 | 62.0 | 4,933 | 1,954,572 |
| MAG04959 | SRR25158343_bin.28 | d__Bacteria;p__Cyanobacteriota;c__Cyanobacteriia;o__Phormidesmidales;f__Phormidesmidaceae;g__Phormidesmis;s__ | 96.31 | 1.49 | 53.0 | 17,202 | 4,605,677 |
| MAG04960 | SRR25158343_bin.29 | d__Bacteria;p__Pseudomonadota;c__Alphaproteobacteria;o__Rickettsiales;f__UBA998;g__JAMWZD01;s__ | 97.46 | 2.5 | 45.0 | 7,997 | 1,988,724 |
| MAG04961 | SRR25158343_bin.31 | d__Bacteria;p__Cyanobacteriota;c__Cyanobacteriia;o__Cyanobacteriales;f__Coleofasciculaceae;g__Allocoleopsis;s__ | 84.64 | 0.47 | 44.0 | 9,961 | 5,022,153 |
| MAG04962 | SRR25158343_bin.32 | d__Bacteria;p__Actinomycetota;c__Acidimicrobiia;o__Acidimicrobiales;f__AC-14;g__JALZBN01;s__ | 85.94 | 1.27 | 70.0 | 25,981 | 2,465,219 |
| MAG04963 | SRR25158343_bin.33 | d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Chitinophagales;f__Chitinophagaceae;g__Ginsengibacter;s__ | 98.5 | 0.0 | 44.0 | 74,183 | 4,992,752 |
| MAG04964 | SRR25158343_bin.34 | d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Flavobacteriaceae;g__Aegicerativicinus;s__ | 99.93 | 3.42 | 37.0 | 25,443 | 3,818,952 |
| MAG04965 | SRR25158343_bin.37 | d__Bacteria;p__Patescibacteriota;c__Saccharimonadia;o__Saccharimonadales;f__UBA10212;g__JACDFN01;s__ | 83.59 | 3.89 | 46.0 | 6,938 | 532,727 |
| MAG04966 | SRR25158343_bin.38 | d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Enterobacterales;f__Alteromonadaceae;g__Rheinheimera;s__ | 100.0 | 1.62 | 51.0 | 54,116 | 4,152,552 |
| MAG04967 | SRR25158343_bin.39 | d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__Gemmatimonadales;f__GWC2-71-9;g__CAMLHP01;s__ | 82.17 | 1.18 | 66.0 | 8,726 | 2,316,127 |
| MAG04968 | SRR25158343_bin.4 | d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__ELB16-189;s__ | 87.89 | 0.05 | 39.0 | 6,305 | 4,291,906 |
| MAG04969 | SRR25158343_bin.40 | d__Bacteria;p__Actinomycetota;c__Actinomycetes;o__Propionibacteriales;f__Nocardioidaceae;g__JALZDI01;s__ | 98.72 | 0.3 | 73.0 | 47,851 | 3,638,431 |
| MAG04970 | SRR25158343_bin.42 | d__Bacteria;p__Pseudomonadota;c__Alphaproteobacteria;o__Rhizobiales;f__Rhizobiaceae;g__Hoeflea;s__ | 100.0 | 0.79 | 60.0 | 116,106 | 5,143,098 |
| MAG04971 | SRR25158343_bin.43 | d__Bacteria;p__Pseudomonadota;c__Alphaproteobacteria;o__JAJUGE01;f__JAJUGE01;g__;s__ | 77.52 | 1.88 | 67.0 | 9,188 | 3,927,103 |
| MAG04972 | SRR25158343_bin.5 | d__Bacteria;p__Acidobacteriota;c__Blastocatellia;o__Pyrinomonadales;f__Pyrinomonadaceae;g__;s__ | 95.79 | 0.11 | 44.0 | 255,978 | 5,202,434 |
| MAG04973 | SRR25158343_bin.7 | d__Bacteria;p__Actinomycetota;c__Actinomycetes;o__Mycobacteriales;f__Pseudonocardiaceae;g__GCA-003244245;s__ | 95.08 | 1.33 | 71.0 | 37,923 | 4,910,309 |
| ID | Name | Taxonomy | Completeness | Contamination | GC | N50 | Size |