GWM
Global Wetland Microbiome Database
Overview
| ID | SMP0166 |
|---|---|
| Name | SRR25158408 |
| Type | unclassified |
| Habitat | soil |
| Country | China |
| Latitude and longitude | 28.61222222 N 115.8344444 E |
| Altitude (m) | |
| Instrument | Illumina HiSeq 4000 |
| AvgSpotLen (bp) | 300 |
| LibraryLayout | PAIRED |
| Project | PRJNA983538 |
| Collection Date |
Location
Community profile
The microbial community profiled by MetaPhlAn4
MAGs29
The MAGs in SMP0166
| ID | Name | Taxonomy | Completeness | Contamination | GC | N50 | Size |
|---|---|---|---|---|---|---|---|
| MAG05278 | SRR25158408_bin.1 | d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Limnobacter;s__Limnobacter sp036275635 | 73.11 | 1.57 | 56.0 | 5,395 | 2,149,634 |
| MAG05279 | SRR25158408_bin.11 | d__Bacteria;p__Acidobacteriota;c__Vicinamibacteria;o__Vicinamibacterales;f__UBA2999;g__12-FULL-67-14b;s__ | 70.24 | 1.37 | 65.0 | 4,263 | 3,791,919 |
| MAG05280 | SRR25158408_bin.12 | d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Nevskiales;f__Nevskiaceae;g__DASUDL01;s__DASUDL01 sp036275615 | 89.44 | 4.03 | 69.0 | 26,238 | 2,939,508 |
| MAG05281 | SRR25158408_bin.13 | d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Xanthomonadales;f__Xanthomonadaceae;g__Arenimonas;s__Arenimonas sp036275555 | 90.62 | 0.96 | 70.0 | 77,895 | 2,885,124 |
| MAG05282 | SRR25158408_bin.14 | d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Luteibaculaceae;g__DASUEB01;s__DASUEB01 sp036275295 | 84.05 | 0.0 | 47.0 | 18,204 | 2,283,334 |
| MAG05283 | SRR25158408_bin.15 | d__Bacteria;p__Chloroflexota;c__Anaerolineae;o__UBA4142;f__UBA4142;g__JACQYF01;s__ | 59.53 | 0.87 | 59.0 | 2,418 | 3,320,931 |
| MAG05284 | SRR25158408_bin.16 | d__Bacteria;p__Acidobacteriota;c__Blastocatellia;o__RBC074;f__RBC074;g__JAFDVL01;s__ | 70.79 | 0.97 | 54.0 | 10,218 | 4,903,893 |
| MAG05285 | SRR25158408_bin.18 | d__Bacteria;p__Bdellovibrionota;c__Bdellovibrionia;o__Bdellovibrionales;f__DASUEL01;g__DASUEL01;s__DASUEL01 sp036275095 | 86.33 | 1.62 | 58.0 | 5,639 | 3,961,721 |
| MAG05286 | SRR25158408_bin.19 | d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Pseudomonadales;f__Ketobacteraceae;g__Ch67;s__ | 74.7 | 3.37 | 60.0 | 3,234 | 4,191,831 |
| MAG05287 | SRR25158408_bin.2 | d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Pseudomonadales;f__UBA3067;g__DAIRVL01;s__ | 71.15 | 3.08 | 50.0 | 4,129 | 2,009,098 |
| MAG05288 | SRR25158408_bin.20 | d__Bacteria;p__Actinomycetota;c__Acidimicrobiia;o__Acidimicrobiales;f__JACDCH01;g__UBA9382;s__UBA9382 sp036275235 | 81.04 | 4.39 | 73.0 | 6,843 | 2,982,108 |
| MAG05289 | SRR25158408_bin.21 | d__Bacteria;p__Actinomycetota;c__Actinomycetes;o__Propionibacteriales;f__Nocardioidaceae;g__Nocardioides_B;s__ | 65.72 | 2.78 | 73.0 | 6,531 | 2,721,557 |
| MAG05290 | SRR25158408_bin.22 | d__Bacteria;p__Actinomycetota;c__Acidimicrobiia;o__Acidimicrobiales;f__JACDCH01;g__VFJN01;s__VFJN01 sp036275535 | 88.27 | 1.52 | 73.0 | 29,228 | 2,787,834 |
| MAG05291 | SRR25158408_bin.23 | d__Bacteria;p__Patescibacteriota;c__Minisyncoccia;o__UBA9973;f__UBA5272;g__UBA11704;s__ | 83.95 | 2.85 | 46.0 | 8,408 | 699,961 |
| MAG05292 | SRR25158408_bin.25 | d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Nevskiales;f__Nevskiaceae;g__DASUDX01;s__DASUDX01 sp036275365 | 100.0 | 0.12 | 71.0 | 18,033 | 2,696,946 |
| MAG05293 | SRR25158408_bin.26 | d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Chitinophagales;f__Chitinophagaceae;g__JJ008;s__JJ008 sp036275415 | 89.03 | 0.56 | 43.0 | 8,968 | 2,700,975 |
| MAG05294 | SRR25158408_bin.3 | d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Enterobacterales;f__DSM-103792;g__Permianibacter;s__Permianibacter sp036275115 | 67.53 | 1.75 | 61.0 | 8,304 | 2,801,865 |
| MAG05295 | SRR25158408_bin.34 | d__Bacteria;p__Pseudomonadota;c__Alphaproteobacteria;o__UBA11222;f__UBA11222;g__UBA11222;s__UBA11222 sp023252275 | 97.47 | 3.86 | 58.0 | 8,996 | 2,578,998 |
| MAG05296 | SRR25158408_bin.35 | d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Limnobacter;s__Limnobacter sp036275215 | 83.53 | 4.36 | 55.0 | 17,997 | 2,571,774 |
| MAG05297 | SRR25158408_bin.38 | d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Limnobacter;s__Limnobacter sp036275655 | 73.91 | 1.71 | 56.0 | 17,936 | 2,604,750 |
| MAG05298 | SRR25158408_bin.4 | d__Bacteria;p__Pseudomonadota;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Sphingomicrobium;s__Sphingomicrobium sediminicola_A | 87.18 | 2.9 | 63.0 | 12,965 | 2,289,227 |
| MAG05299 | SRR25158408_bin.40 | d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Pseudomonadales;f__Porticoccaceae;g__JAGPUQ01;s__JAGPUQ01 sp036275455 | 89.39 | 3.12 | 66.0 | 13,629 | 2,120,664 |
| MAG05300 | SRR25158408_bin.41 | d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Limnobacter;s__Limnobacter sp001601825 | 90.25 | 3.15 | 53.0 | 18,649 | 2,604,618 |
| MAG05301 | SRR25158408_bin.43 | d__Bacteria;p__Acidobacteriota;c__Holophagae;o__Holophagales;f__Holophagaceae;g__Geothrix;s__ | 78.5 | 4.91 | 69.0 | 3,454 | 2,344,867 |
| MAG05302 | SRR25158408_bin.44 | d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__CADEEN01;s__ | 81.44 | 4.65 | 71.0 | 6,807 | 3,479,552 |
| MAG05303 | SRR25158408_bin.46 | d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__CADEEN01;s__CADEEN01 sp035716845 | 98.66 | 8.39 | 71.0 | 13,806 | 3,953,780 |
| MAG05304 | SRR25158408_bin.5 | d__Bacteria;p__Pseudomonadota;c__Alphaproteobacteria;o__Rhizobiales;f__Hyphomicrobiaceae;g__Ga0077555;s__ | 65.16 | 1.95 | 66.0 | 5,545 | 3,219,582 |
| MAG05305 | SRR25158408_bin.6 | d__Bacteria;p__Patescibacteriota;c__Minisyncoccia;o__UBA9973;f__UBA918;g__Damh-18;s__Damh-18 sp036275695 | 95.18 | 0.2 | 44.0 | 17,600 | 651,207 |
| MAG05306 | SRR25158408_bin.8 | d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Burkholderiales;f__Casimicrobiaceae;g__VBCG01;s__ | 85.86 | 3.36 | 72.0 | 5,962 | 3,808,179 |
| ID | Name | Taxonomy | Completeness | Contamination | GC | N50 | Size |