GWM
Global Wetland Microbiome Database
Overview
| ID | SMP0184 |
|---|---|
| Name | SRR25158527 |
| Type | unclassified |
| Habitat | soil |
| Country | China |
| Latitude and longitude | 36.06444444 N 120.1038889 E |
| Altitude (m) | |
| Instrument | Illumina HiSeq 4000 |
| AvgSpotLen (bp) | 300 |
| LibraryLayout | PAIRED |
| Project | PRJNA983538 |
| Collection Date |
Location
Community profile
The microbial community profiled by MetaPhlAn4
MAGs11
The MAGs in SMP0184
| ID | Name | Taxonomy | Completeness | Contamination | GC | N50 | Size |
|---|---|---|---|---|---|---|---|
| MAG05405 | SRR25158527_bin.1 | d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Chitinophagales;f__Saprospiraceae;g__Vicinibacter;s__ | 73.98 | 0.03 | 50.0 | 4,960 | 2,019,470 |
| MAG05406 | SRR25158527_bin.12 | d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Steroidobacterales;f__Steroidobacteraceae;g__RPQJ01;s__RPQJ01 sp036277615 | 87.0 | 1.86 | 68.0 | 6,665 | 3,803,437 |
| MAG05407 | SRR25158527_bin.15 | d__Bacteria;p__Actinomycetota;c__Acidimicrobiia;o__UBA5794;f__UBA11373;g__UBA11373;s__ | 53.91 | 0.77 | 68.0 | 2,479 | 1,321,387 |
| MAG05408 | SRR25158527_bin.16 | d__Bacteria;p__Desulfobacterota_B;c__Binatia;o__UBA9968;f__UBA9968;g__DP-20;s__ | 75.53 | 3.99 | 58.0 | 2,788 | 2,605,926 |
| MAG05409 | SRR25158527_bin.19 | d__Bacteria;p__Pseudomonadota;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Erythrobacter;s__ | 62.1 | 0.81 | 65.0 | 3,138 | 1,646,838 |
| MAG05410 | SRR25158527_bin.2 | d__Bacteria;p__Chloroflexota;c__Anaerolineae;o__Anaerolineales;f__Villigracilaceae;g__Defluviilinea;s__ | 81.91 | 1.53 | 50.0 | 6,209 | 3,893,356 |
| MAG05411 | SRR25158527_bin.3 | d__Bacteria;p__Chloroflexota;c__Limnocylindria;o__Limnocylindrales;f__CSP1-4;g__UBA5189;s__UBA5189 sp036277775 | 87.78 | 1.76 | 73.0 | 7,475 | 2,809,412 |
| MAG05412 | SRR25158527_bin.4 | d__Bacteria;p__Nitrospirota;c__Nitrospiria;o__Nitrospirales;f__Nitrospiraceae;g__Nitrospira_D;s__Nitrospira_D sp036277675 | 77.46 | 2.48 | 58.0 | 8,435 | 2,318,051 |
| MAG05413 | SRR25158527_bin.5 | d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Burkholderiales;f__SG8-39;g__2-02-FULL-66-14;s__2-02-FULL-66-14 sp036277655 | 76.29 | 2.22 | 67.0 | 5,592 | 2,797,638 |
| MAG05414 | SRR25158527_bin.6 | d__Bacteria;p__Actinomycetota;c__Acidimicrobiia;o__IMCC26256;f__PALSA-610;g__DASUMP01;s__DASUMP01 sp036277635 | 69.59 | 1.47 | 71.0 | 10,926 | 2,445,218 |
| MAG05415 | SRR25158527_bin.9 | d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Chitinophagales;f__Chitinophagaceae;g__CADEDV01;s__CADEDV01 sp036277695 | 99.49 | 2.94 | 45.0 | 9,971 | 4,704,765 |
| ID | Name | Taxonomy | Completeness | Contamination | GC | N50 | Size |