GWM
Global Wetland Microbiome Database
Overview
| ID | SMP0719 |
|---|---|
| Name | SRR21617309 |
| Type | paddy |
| Habitat | soil |
| Country | China |
| Latitude and longitude | 24.55 N 113.68 E |
| Altitude (m) | |
| Instrument | Illumina HiSeq 2500 |
| AvgSpotLen (bp) | 300 |
| LibraryLayout | PAIRED |
| Project | PRJNA870682 |
| Collection Date | 2019-12-01 |
Location
Community profile
The microbial community profiled by MetaPhlAn4
MAGs27
The MAGs in SMP0719
| ID | Name | Taxonomy | Completeness | Contamination | GC | N50 | Size |
|---|---|---|---|---|---|---|---|
| MAG05438 | SRR21617309_bin.1 | d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__Gemmatimonadales;f__GWC2-71-9;g__JACPAP01;s__ | 93.86 | 1.9 | 68.0 | 23,439 | 3,917,880 |
| MAG05439 | SRR21617309_bin.10 | d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Burkholderiales;f__SG8-41;g__SG8-41;s__ | 88.26 | 3.6 | 65.0 | 7,727 | 3,969,619 |
| MAG05440 | SRR21617309_bin.12 | d__Bacteria;p__Chloroflexota;c__Anaerolineae;o__Anaerolineales;f__Villigracilaceae;g__Fen-1038;s__ | 68.61 | 1.27 | 56.0 | 6,536 | 2,150,897 |
| MAG05441 | SRR21617309_bin.13 | d__Bacteria;p__Chloroflexota;c__Anaerolineae;o__Anaerolineales;f__UBA11579;g__JAMCZK01;s__ | 83.12 | 3.7 | 54.0 | 7,902 | 2,101,653 |
| MAG05442 | SRR21617309_bin.15 | d__Bacteria;p__Nitrospirota;c__Nitrospiria;o__2-01-FULL-66-17;f__2-01-FULL-66-17;g__2-01-FULL-66-17;s__ | 85.96 | 2.08 | 67.0 | 5,452 | 2,014,329 |
| MAG05443 | SRR21617309_bin.16 | d__Bacteria;p__Desulfobacterota_B;c__Binatia;o__UBA9968;f__UBA9968;g__JAJPJQ01;s__ | 55.01 | 0.69 | 60.0 | 5,151 | 1,985,406 |
| MAG05444 | SRR21617309_bin.17 | d__Bacteria;p__Sysuimicrobiota;c__Sysuimicrobiia;o__Sysuimicrobiales;f__Kaftiobacteriaceae;g__;s__ | 79.21 | 1.67 | 67.0 | 12,453 | 2,036,082 |
| MAG05445 | SRR21617309_bin.2 | d__Bacteria;p__Acidobacteriota;c__HRBIN11;o__JAKEFK01;f__JAKEFK01;g__;s__ | 65.94 | 2.13 | 51.0 | 3,828 | 2,574,724 |
| MAG05446 | SRR21617309_bin.20 | d__Bacteria;p__Nitrospirota;c__Nitrospiria;o__JACQBZ01;f__JACQBZ01;g__;s__ | 63.56 | 0.05 | 59.0 | 2,231 | 1,255,135 |
| MAG05447 | SRR21617309_bin.22 | d__Bacteria;p__Zixibacteria;c__MSB-5A5;o__GN15;f__FEB-12;g__;s__ | 99.71 | 0.33 | 47.0 | 49,640 | 2,700,298 |
| MAG05448 | SRR21617309_bin.23 | d__Bacteria;p__Acidobacteriota;c__Terriglobia;o__Acidiferrales;f__2-02-FULL-67-57;g__2-02-FULL-67-57;s__ | 99.48 | 1.6 | 67.0 | 151,950 | 2,831,543 |
| MAG05449 | SRR21617309_bin.25 | d__Bacteria;p__;c__;o__;f__;g__;s__ | 97.9 | 0.34 | 58.0 | 79,408 | 3,349,099 |
| MAG05450 | SRR21617309_bin.26 | d__Bacteria;p__Chloroflexota;c__Dehalococcoidia;o__DSTF01;f__JACRBR01;g__DASQHL01;s__ | 81.08 | 1.11 | 69.0 | 6,303 | 2,686,297 |
| MAG05451 | SRR21617309_bin.27 | d__Bacteria;p__Bacteroidota_A;c__UBA10030;o__UBA10030;f__JAHEZR01;g__;s__ | 81.16 | 3.29 | 51.0 | 4,647 | 2,083,189 |
| MAG05452 | SRR21617309_bin.28 | d__Bacteria;p__Methylomirabilota;c__Methylomirabilia;o__Rokubacteriales;f__CSP1-6;g__CSP1-6;s__ | 87.56 | 2.74 | 68.0 | 10,746 | 2,949,987 |
| MAG05453 | SRR21617309_bin.31 | d__Bacteria;p__Chloroflexota;c__Anaerolineae;o__UBA4142;f__UBA4142;g__;s__ | 94.42 | 2.39 | 57.0 | 36,775 | 3,804,400 |
| MAG05454 | SRR21617309_bin.32 | d__Bacteria;p__Chloroflexota;c__Anaerolineae;o__UBA4142;f__UBA4142;g__;s__ | 86.43 | 2.69 | 56.0 | 8,511 | 3,106,155 |
| MAG05455 | SRR21617309_bin.34 | d__Bacteria;p__Acidobacteriota;c__Vicinamibacteria;o__Fen-336;f__Fen-336;g__DATFEN01;s__ | 96.27 | 2.19 | 70.0 | 66,232 | 6,328,731 |
| MAG05456 | SRR21617309_bin.35 | d__Bacteria;p__Nitrospirota;c__Nitrospiria;o__Nitrospirales;f__Nitrospiraceae;g__Palsa-1315;s__Palsa-1315 sp041491905 | 64.57 | 2.14 | 57.0 | 4,012 | 1,991,309 |
| MAG05457 | SRR21617309_bin.37 | d__Bacteria;p__Nitrospirota;c__Nitrospiria;o__Nitrospirales;f__Nitrospiraceae;g__2-02-FULL-62-14;s__ | 63.72 | 2.64 | 61.0 | 6,689 | 1,323,072 |
| MAG05458 | SRR21617309_bin.38 | d__Bacteria;p__Acidobacteriota;c__Terriglobia;o__Bryobacterales;f__JACQDG01;g__JBGOUV01;s__ | 82.51 | 3.92 | 66.0 | 26,853 | 6,040,911 |
| MAG05459 | SRR21617309_bin.4 | d__Bacteria;p__Zixibacteria;c__MSB-5A5;o__MSB-5A5;f__;g__;s__ | 92.36 | 3.39 | 40.0 | 11,103 | 2,202,248 |
| MAG05460 | SRR21617309_bin.5 | d__Bacteria;p__Nitrospirota;c__UBA9217;o__UBA9217;f__UBA9217;g__;s__ | 84.97 | 0.6 | 60.0 | 8,634 | 2,476,632 |
| MAG05461 | SRR21617309_bin.6 | d__Bacteria;p__Acidobacteriota;c__Terriglobia;o__Acidiferrales;f__UBA7541;g__JACQDE01;s__ | 77.23 | 3.26 | 60.0 | 10,233 | 2,914,330 |
| MAG05462 | SRR21617309_bin.7 | d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Burkholderiales;f__SG8-39;g__JAABQT01;s__ | 84.72 | 1.88 | 68.0 | 23,467 | 3,034,505 |
| MAG05463 | SRR21617309_bin.8 | d__Bacteria;p__Chloroflexota;c__Limnocylindria;o__Limnocylindrales;f__CSP1-4;g__UBA5189;s__ | 57.4 | 1.26 | 73.0 | 4,277 | 2,094,261 |
| MAG05464 | SRR21617309_bin.9 | d__Bacteria;p__Acidobacteriota;c__Terriglobia;o__Terriglobales;f__JAIQGF01;g__;s__ | 74.89 | 3.28 | 64.0 | 5,936 | 2,591,284 |
| ID | Name | Taxonomy | Completeness | Contamination | GC | N50 | Size |