GWM
Global Wetland Microbiome Database
Overview
| ID | SMP0721 |
|---|---|
| Name | SRR21617311 |
| Type | paddy |
| Habitat | soil |
| Country | China |
| Latitude and longitude | 24.55 N 113.66 E |
| Altitude (m) | |
| Instrument | Illumina HiSeq 2500 |
| AvgSpotLen (bp) | 300 |
| LibraryLayout | PAIRED |
| Project | PRJNA870682 |
| Collection Date | 2019-12-01 |
Location
Community profile
The microbial community profiled by MetaPhlAn4
MAGs13
The MAGs in SMP0721
| ID | Name | Taxonomy | Completeness | Contamination | GC | N50 | Size |
|---|---|---|---|---|---|---|---|
| MAG05481 | SRR21617311_bin.1 | d__Bacteria;p__Nitrospirota;c__UBA9217;o__UBA9217;f__UBA9217;g__;s__ | 90.46 | 2.24 | 59.0 | 12,901 | 3,121,200 |
| MAG05482 | SRR21617311_bin.10 | d__Archaea;p__Thermoproteota;c__Bathyarchaeia;o__Bathyarchaeales;f__Bathyarchaeaceae;g__DATETJ01;s__ | 77.96 | 5.5 | 48.0 | 2,779 | 1,823,880 |
| MAG05483 | SRR21617311_bin.11 | d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Acidiferrobacterales;f__Sulfurifustaceae;g__Sulfuricaulis;s__ | 83.84 | 2.24 | 60.0 | 16,073 | 2,274,712 |
| MAG05484 | SRR21617311_bin.12 | d__Bacteria;p__Patescibacteriota;c__Microgenomatia;o__GWA2-44-7;f__UBA8517;g__;s__ | 98.18 | 1.73 | 43.0 | 41,319 | 776,708 |
| MAG05485 | SRR21617311_bin.16 | d__Bacteria;p__Chloroflexota;c__Anaerolineae;o__UBA4142;f__UBA4142;g__;s__ | 96.24 | 0.38 | 55.0 | 29,203 | 3,732,683 |
| MAG05486 | SRR21617311_bin.17 | d__Bacteria;p__Nitrospirota;c__Nitrospiria;o__2-01-FULL-66-17;f__2-01-FULL-66-17;g__2-01-FULL-66-17;s__ | 83.26 | 1.07 | 66.0 | 9,617 | 2,207,974 |
| MAG05487 | SRR21617311_bin.18 | d__Bacteria;p__Acidobacteriota;c__Terriglobia;o__Acidiferrales;f__2-02-FULL-67-57;g__;s__ | 88.76 | 1.0 | 65.0 | 20,306 | 2,537,423 |
| MAG05488 | SRR21617311_bin.2 | d__Bacteria;p__;c__;o__;f__;g__;s__ | 87.93 | 1.77 | 51.0 | 5,852 | 1,665,025 |
| MAG05489 | SRR21617311_bin.20 | d__Bacteria;p__Chloroflexota;c__Anaerolineae;o__Anaerolineales;f__Villigracilaceae;g__Fen-1038;s__ | 67.66 | 2.72 | 57.0 | 6,524 | 2,553,880 |
| MAG05490 | SRR21617311_bin.21 | d__Bacteria;p__Nitrospirota;c__Nitrospiria;o__Nitrospirales;f__Nitrospiraceae;g__DASPUC01;s__ | 76.8 | 4.78 | 57.0 | 3,676 | 2,671,855 |
| MAG05491 | SRR21617311_bin.22 | d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Burkholderiales;f__Gallionellaceae;g__Sideroxyarcus;s__ | 64.14 | 2.42 | 62.0 | 3,537 | 1,687,239 |
| MAG05492 | SRR21617311_bin.3 | d__Bacteria;p__Zixibacteria;c__MSB-5A5;o__DSPP01;f__;g__;s__ | 92.86 | 2.86 | 58.0 | 4,881 | 2,144,213 |
| MAG05493 | SRR21617311_bin.6 | d__Bacteria;p__Bacteroidota_A;c__Ignavibacteria;o__SJA-28;f__OLB5;g__;s__ | 69.51 | 3.52 | 40.0 | 2,507 | 2,217,806 |
| ID | Name | Taxonomy | Completeness | Contamination | GC | N50 | Size |