GWM
Global Wetland Microbiome Database
Overview
| ID | SMP0765 |
|---|---|
| Name | SRR34280931 |
| Type | paddy |
| Habitat | soil |
| Country | China |
| Latitude and longitude | 32.427588 N 113.498657 E |
| Altitude (m) | |
| Instrument | Illumina NovaSeq 6000 |
| AvgSpotLen (bp) | 302 |
| LibraryLayout | PAIRED |
| Project | PRJNA1283286 |
| Collection Date | 2022-07-23 |
Location
Community profile
The microbial community profiled by MetaPhlAn4
MAGs47
The MAGs in SMP0765
| ID | Name | Taxonomy | Completeness | Contamination | GC | N50 | Size |
|---|---|---|---|---|---|---|---|
| MAG05583 | SRR34280931_bin.1 | d__Bacteria;p__Patescibacteriota;c__Microgenomatia;o__Levybacterales;f__UBA12049;g__JACROF01;s__ | 98.87 | 0.9 | 40.0 | 10,341 | 877,989 |
| MAG05584 | SRR34280931_bin.10 | d__Bacteria;p__Myxococcota;c__Polyangia;o__Palsa-1104;f__JAEUJZ01;g__CALFML01;s__ | 73.11 | 3.94 | 70.0 | 9,282 | 5,399,205 |
| MAG05585 | SRR34280931_bin.11 | d__Bacteria;p__Acidobacteriota;c__Blastocatellia;o__Pyrinomonadales;f__Pyrinomonadaceae;g__OLB17;s__ | 95.93 | 0.01 | 55.0 | 227,257 | 3,352,699 |
| MAG05586 | SRR34280931_bin.12 | d__Bacteria;p__Pseudomonadota;c__Alphaproteobacteria;o__Rhizobiales;f__Devosiaceae;g__DASZTU01;s__ | 81.21 | 1.1 | 66.0 | 10,066 | 2,930,936 |
| MAG05587 | SRR34280931_bin.14 | d__Bacteria;p__Bacteroidota_A;c__Ignavibacteria;o__SJA-28;f__B-1AR;g__JAGPCH01;s__ | 74.52 | 1.68 | 34.0 | 5,321 | 2,305,657 |
| MAG05588 | SRR34280931_bin.15 | d__Bacteria;p__Planctomycetota;c__Planctomycetia;o__Planctomycetales;f__Planctomycetaceae;g__DSVQ01;s__ | 88.95 | 4.26 | 59.0 | 5,449 | 6,151,240 |
| MAG05589 | SRR34280931_bin.16 | d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Burkholderiales;f__Casimicrobiaceae;g__Casimicrobium;s__Casimicrobium huifangae | 93.27 | 5.12 | 62.0 | 17,670 | 4,217,245 |
| MAG05590 | SRR34280931_bin.17 | d__Bacteria;p__Acidobacteriota;c__Blastocatellia;o__Pyrinomonadales;f__Pyrinomonadaceae;g__OLB17;s__ | 89.84 | 0.74 | 54.0 | 23,708 | 3,635,069 |
| MAG05591 | SRR34280931_bin.18 | d__Bacteria;p__Acidobacteriota;c__Vicinamibacteria;o__Vicinamibacterales;f__UBA2999;g__CADEFD01;s__ | 65.03 | 2.02 | 70.0 | 4,095 | 3,550,313 |
| MAG05592 | SRR34280931_bin.2 | d__Bacteria;p__Patescibacteriota;c__Saccharimonadia;o__Saccharimonadales;f__UBA4665;g__JBDHUJ01;s__ | 96.43 | 1.7 | 54.0 | 5,514 | 980,762 |
| MAG05593 | SRR34280931_bin.20 | d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Xanthomonadales;f__Xanthomonadaceae;g__Thermomonas;s__Thermomonas beijingensis | 93.85 | 0.56 | 61.0 | 17,452 | 2,469,628 |
| MAG05594 | SRR34280931_bin.22 | d__Bacteria;p__Patescibacteriota;c__Gracilibacteria;o__UBA1369;f__UBA1369;g__;s__ | 82.48 | 1.18 | 38.0 | 7,148 | 932,306 |
| MAG05595 | SRR34280931_bin.23 | d__Bacteria;p__Acidobacteriota;c__Blastocatellia;o__Pyrinomonadales;f__Pyrinomonadaceae;g__OLB17;s__ | 77.53 | 1.43 | 53.0 | 11,888 | 2,618,848 |
| MAG05596 | SRR34280931_bin.24 | d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Chitinophagales;f__Chitinophagaceae;g__Ferruginibacter;s__Ferruginibacter sp018266715 | 97.4 | 1.08 | 40.0 | 32,602 | 2,744,321 |
| MAG05597 | SRR34280931_bin.25 | d__Bacteria;p__Bacteroidota_A;c__Kapaibacteriia;o__OLB7;f__OLB7;g__OLB7;s__OLB7 sp016788565 | 98.97 | 0.91 | 56.0 | 12,458 | 4,363,306 |
| MAG05598 | SRR34280931_bin.26 | d__Bacteria;p__Patescibacteriota;c__Minisyncoccia;o__UBA9973;f__UBA2103;g__1-14-0-10-45-20;s__ | 72.36 | 1.18 | 54.0 | 5,262 | 572,707 |
| MAG05599 | SRR34280931_bin.27 | d__Bacteria;p__Acidobacteriota;c__Blastocatellia;o__RBC074;f__RBC074;g__DASRDU01;s__ | 93.35 | 0.21 | 59.0 | 8,395 | 6,002,964 |
| MAG05600 | SRR34280931_bin.28 | d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Spirosomataceae;g__;s__ | 85.47 | 3.25 | 42.0 | 8,729 | 5,633,419 |
| MAG05601 | SRR34280931_bin.3 | d__Bacteria;p__Patescibacteriota;c__Minisyncoccia;o__UBA9973;f__Zambryskibacteraceae;g__JBGTNQ01;s__ | 91.45 | 3.88 | 41.0 | 9,095 | 647,617 |
| MAG05602 | SRR34280931_bin.30 | d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Chitinophagales;f__Chitinophagaceae;g__Ferruginibacter;s__Ferruginibacter sp017303335 | 84.59 | 3.16 | 50.0 | 3,772 | 2,962,434 |
| MAG05603 | SRR34280931_bin.31 | d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__Gemmatimonadales;f__Gemmatimonadaceae;g__Gemmatimonas;s__ | 96.05 | 3.1 | 67.0 | 176,194 | 4,963,037 |
| MAG05604 | SRR34280931_bin.32 | d__Bacteria;p__Acidobacteriota;c__Blastocatellia;o__Pyrinomonadales;f__Pyrinomonadaceae;g__OLB17;s__ | 96.22 | 0.83 | 52.0 | 142,120 | 3,550,962 |
| MAG05605 | SRR34280931_bin.34 | d__Bacteria;p__Pseudomonadota;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Tabrizicola;s__ | 67.44 | 0.27 | 67.0 | 20,617 | 2,571,247 |
| MAG05606 | SRR34280931_bin.35 | d__Bacteria;p__Pseudomonadota;c__Alphaproteobacteria;o__Rhizobiales;f__Rhizobiaceae;g__JANMEX01;s__ | 97.02 | 1.14 | 61.0 | 9,688 | 2,970,505 |
| MAG05607 | SRR34280931_bin.37 | d__Bacteria;p__Pseudomonadota;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Tabrizicola;s__ | 84.96 | 4.7 | 66.0 | 13,098 | 3,748,913 |
| MAG05608 | SRR34280931_bin.4 | d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__PHOS-HE28;g__PHOS-HE28;s__ | 70.73 | 2.5 | 65.0 | 3,687 | 2,991,559 |
| MAG05609 | SRR34280931_bin.40 | d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Xanthomonadales;f__Rhodanobacteraceae;g__Rudaea;s__Rudaea sp018240465 | 100.0 | 0.71 | 65.0 | 159,891 | 3,842,593 |
| MAG05610 | SRR34280931_bin.41 | d__Bacteria;p__Pseudomonadota;c__Alphaproteobacteria;o__Micavibrionales;f__Micavibrionaceae;g__Micavibrio_A;s__ | 61.34 | 1.36 | 53.0 | 1,844 | 1,121,489 |
| MAG05611 | SRR34280931_bin.42 | d__Bacteria;p__Acidobacteriota;c__Blastocatellia;o__Pyrinomonadales;f__Pyrinomonadaceae;g__OLB17;s__ | 91.32 | 2.98 | 50.0 | 24,192 | 3,465,845 |
| MAG05612 | SRR34280931_bin.43 | d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Burkholderiales;f__Casimicrobiaceae;g__Casimicrobium;s__ | 75.7 | 2.15 | 63.0 | 9,521 | 3,411,514 |
| MAG05613 | SRR34280931_bin.45 | d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__Gemmatimonadales;f__Gemmatimonadaceae;g__;s__ | 99.97 | 1.96 | 63.0 | 308,681 | 6,148,464 |
| MAG05614 | SRR34280931_bin.46 | d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__Gemmatimonadales;f__Gemmatimonadaceae;g__SCN-70-22;s__SCN-70-22 sp039809585 | 90.5 | 4.7 | 67.0 | 11,299 | 5,910,034 |
| MAG05615 | SRR34280931_bin.47 | d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Xanthomonadales;f__Rhodanobacteraceae;g__Rudaea;s__Rudaea sp021404785 | 69.28 | 0.63 | 64.0 | 9,338 | 1,872,053 |
| MAG05616 | SRR34280931_bin.48 | d__Bacteria;p__Bacteroidota_A;c__Ignavibacteria;o__SJA-28;f__B-1AR;g__JAGPCH01;s__JAGPCH01 sp039810605 | 90.7 | 2.93 | 39.0 | 9,630 | 2,914,970 |
| MAG05617 | SRR34280931_bin.49 | d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__RAM1;s__ | 84.31 | 0.04 | 66.0 | 112,294 | 3,259,004 |
| MAG05618 | SRR34280931_bin.5 | d__Bacteria;p__Acidobacteriota;c__Blastocatellia;o__Pyrinomonadales;f__Pyrinomonadaceae;g__OLB17;s__OLB17 sp018269005 | 74.15 | 2.37 | 55.0 | 6,345 | 2,172,983 |
| MAG05619 | SRR34280931_bin.50 | d__Bacteria;p__Nitrospirota;c__Nitrospiria;o__Nitrospirales;f__Nitrospiraceae;g__Nitrospira_A;s__Nitrospira_A sp014055495 | 82.01 | 0.28 | 60.0 | 12,422 | 3,064,758 |
| MAG05620 | SRR34280931_bin.52 | d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Chitinophagales;f__Chitinophagaceae;g__JJ008;s__JJ008 sp002069045 | 95.39 | 2.59 | 38.0 | 17,905 | 2,881,810 |
| MAG05621 | SRR34280931_bin.54 | d__Bacteria;p__Planctomycetota;c__Phycisphaerae;o__Phycisphaerales;f__UBA1924;g__GCA-016699835;s__ | 56.81 | 0.53 | 69.0 | 4,967 | 2,131,540 |
| MAG05622 | SRR34280931_bin.55 | d__Bacteria;p__Planctomycetota;c__Phycisphaerae;o__Phycisphaerales;f__UBA1924;g__GCA-016699835;s__ | 76.17 | 2.91 | 65.0 | 5,316 | 3,338,312 |
| MAG05623 | SRR34280931_bin.57 | d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__Gemmatimonadales;f__Gemmatimonadaceae;g__RBC101;s__ | 65.91 | 2.07 | 71.0 | 4,710 | 3,456,431 |
| MAG05624 | SRR34280931_bin.58 | d__Bacteria;p__Pseudomonadota;c__Alphaproteobacteria;o__Rhizobiales;f__Rhizobiaceae;g__JAWRCU01;s__ | 83.24 | 2.85 | 67.0 | 16,309 | 3,777,045 |
| MAG05625 | SRR34280931_bin.59 | d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__AKYH767-A;f__OLB10;g__OLB10;s__OLB10 sp002455375 | 87.16 | 1.01 | 37.0 | 5,597 | 2,712,952 |
| MAG05626 | SRR34280931_bin.6 | d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__PHOS-HE28;g__PHOS-HE28;s__PHOS-HE28 sp018267155 | 95.38 | 1.21 | 62.0 | 52,430 | 3,961,700 |
| MAG05627 | SRR34280931_bin.7 | d__Bacteria;p__Chloroflexota;c__Anaerolineae;o__Anaerolineales;f__Villigracilaceae;g__Defluviilinea;s__Defluviilinea gracilis | 97.13 | 0.47 | 54.0 | 69,675 | 3,992,745 |
| MAG05628 | SRR34280931_bin.8 | d__Bacteria;p__Nitrospirota;c__Nitrospiria;o__Nitrospirales;f__Nitrospiraceae;g__Nitrospira_A;s__Nitrospira_A sp014055465 | 88.95 | 1.85 | 58.0 | 79,426 | 3,866,453 |
| MAG05629 | SRR34280931_bin.9 | d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Janthinobacterium;s__Janthinobacterium tructae | 83.56 | 2.94 | 63.0 | 5,921 | 4,815,036 |
| ID | Name | Taxonomy | Completeness | Contamination | GC | N50 | Size |