GWM
Global Wetland Microbiome Database
Overview
| ID | SMP0770 |
|---|---|
| Name | SRR34280936 |
| Type | paddy |
| Habitat | soil |
| Country | China |
| Latitude and longitude | 27.197862 N 114.727146 E |
| Altitude (m) | |
| Instrument | Illumina NovaSeq 6000 |
| AvgSpotLen (bp) | 302 |
| LibraryLayout | PAIRED |
| Project | PRJNA1283286 |
| Collection Date | 2022-08-31 |
Location
Community profile
The microbial community profiled by MetaPhlAn4
MAGs44
The MAGs in SMP0770
| ID | Name | Taxonomy | Completeness | Contamination | GC | N50 | Size |
|---|---|---|---|---|---|---|---|
| MAG05650 | SRR34280936_bin.1 | d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Chitinophagales;f__Chitinophagaceae;g__UBA1930;s__UBA1930 sp019695015 | 100.0 | 1.92 | 31.0 | 74,118 | 2,406,757 |
| MAG05651 | SRR34280936_bin.11 | d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Chitinophagales;f__Chitinophagaceae;g__Ferruginibacter;s__ | 56.78 | 0.85 | 39.0 | 4,088 | 2,772,144 |
| MAG05652 | SRR34280936_bin.12 | d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__B-17B0;f__B-17BO;g__Aurantibacillus;s__Aurantibacillus sp020162035 | 99.86 | 1.78 | 29.0 | 68,958 | 3,130,824 |
| MAG05653 | SRR34280936_bin.13 | d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Chitinophagales;f__Saprospiraceae;g__Parvibacillus;s__Parvibacillus calidus | 100.0 | 0.0 | 41.0 | 96,128 | 3,512,036 |
| MAG05654 | SRR34280936_bin.14 | d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Chitinophagales;f__Chitinophagaceae;g__Ferruginibacter;s__ | 97.83 | 0.38 | 40.0 | 28,330 | 5,062,763 |
| MAG05655 | SRR34280936_bin.15 | d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__Gemmatimonadales;f__Gemmatimonadaceae;g__;s__ | 97.73 | 2.64 | 63.0 | 125,975 | 5,795,204 |
| MAG05656 | SRR34280936_bin.16 | d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Chitinophagales;f__JADIYW01;g__JADJSS01;s__JADJSS01 sp020848475 | 100.0 | 0.2 | 34.0 | 232,287 | 3,032,229 |
| MAG05657 | SRR34280936_bin.17 | d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Chitinophagales;f__Saprospiraceae;g__M3007;s__ | 99.65 | 0.32 | 47.0 | 24,560 | 5,116,714 |
| MAG05658 | SRR34280936_bin.18 | d__Bacteria;p__Cyanobacteriota;c__Sericytochromatia;o__UBA7694;f__JACMQJ01;g__JACMQJ01;s__ | 76.41 | 2.39 | 27.0 | 2,631 | 2,694,973 |
| MAG05659 | SRR34280936_bin.19 | d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Chitinophagales;f__LD1;g__UBA7692;s__UBA7692 sp019638515 | 64.73 | 0.45 | 40.0 | 1,985 | 1,682,975 |
| MAG05660 | SRR34280936_bin.20 | d__Bacteria;p__Acidobacteriota;c__Blastocatellia;o__Pyrinomonadales;f__Pyrinomonadaceae;g__OLB17;s__OLB17 sp015075585 | 98.06 | 1.34 | 54.0 | 60,486 | 2,959,187 |
| MAG05661 | SRR34280936_bin.21 | d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Burkholderiales;f__Nitrosomonadaceae;g__Nitrosomonas;s__Nitrosomonas sp020890945 | 99.99 | 0.0 | 42.0 | 35,001 | 2,686,657 |
| MAG05662 | SRR34280936_bin.22 | d__Bacteria;p__Pseudomonadota;c__Alphaproteobacteria;o__Rhizobiales;f__Beijerinckiaceae;g__JAJXWB01;s__JAJXWB01 sp037044955 | 93.77 | 2.36 | 67.0 | 9,325 | 3,865,575 |
| MAG05663 | SRR34280936_bin.24 | d__Bacteria;p__Bacteroidota_A;c__Kapaibacteriia;o__Kapaibacteriales;f__Kapaibacteriaceae;g__OLB6;s__ | 77.04 | 2.55 | 48.0 | 2,372 | 1,969,741 |
| MAG05664 | SRR34280936_bin.25 | d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__PHOS-HE28;g__PHOS-HE28;s__PHOS-HE28 sp018267065 | 71.08 | 1.4 | 61.0 | 2,529 | 2,443,734 |
| MAG05665 | SRR34280936_bin.26 | d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Xanthomonadales;f__Xanthomonadaceae;g__Pseudoluteimonas;s__ | 82.5 | 0.25 | 69.0 | 14,141 | 2,232,397 |
| MAG05666 | SRR34280936_bin.27 | d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__PHOS-HE28;g__PHOS-HE28;s__PHOS-HE28 sp018267155 | 97.64 | 2.38 | 62.0 | 15,090 | 3,885,763 |
| MAG05667 | SRR34280936_bin.28 | d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Chitinophagales;f__Chitinophagaceae;g__Agriterribacter;s__Agriterribacter sp018268105 | 99.91 | 0.58 | 40.0 | 92,352 | 5,047,650 |
| MAG05668 | SRR34280936_bin.29 | d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__Gemmatimonadales;f__GWC2-71-9;g__DASTHG01;s__DASTHG01 sp035691925 | 61.31 | 0.45 | 68.0 | 4,337 | 2,855,120 |
| MAG05669 | SRR34280936_bin.3 | d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Chitinophagales;f__Chitinophagaceae;g__Ferruginibacter;s__Ferruginibacter sp018266715 | 97.2 | 1.51 | 40.0 | 7,728 | 2,480,556 |
| MAG05670 | SRR34280936_bin.30 | d__Bacteria;p__Bdellovibrionota;c__Bdellovibrionia;o__Bdellovibrionales;f__JAMPXM01;g__SXRI01;s__ | 97.29 | 4.34 | 55.0 | 6,084 | 3,352,366 |
| MAG05671 | SRR34280936_bin.31 | d__Bacteria;p__Pseudomonadota;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Sandaracinobacteroides;s__ | 95.87 | 1.13 | 66.0 | 15,454 | 2,420,572 |
| MAG05672 | SRR34280936_bin.32 | d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Chitinophagales;f__Saprospiraceae;g__Parvibacillus;s__ | 99.4 | 0.14 | 40.0 | 128,382 | 3,362,366 |
| MAG05673 | SRR34280936_bin.33 | d__Bacteria;p__Myxococcota;c__Polyangia;o__Polyangiales;f__Polyangiaceae;g__JADLFU01;s__ | 91.18 | 1.3 | 73.0 | 16,616 | 6,184,142 |
| MAG05674 | SRR34280936_bin.34 | d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Chitinophagales;f__Chitinophagaceae;g__Niabella;s__ | 99.17 | 0.1 | 37.0 | 92,879 | 3,562,825 |
| MAG05675 | SRR34280936_bin.35 | d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Xanthomonadales;f__Xanthomonadaceae;g__Thermomonas;s__Thermomonas sp018242365 | 87.6 | 4.89 | 65.0 | 7,746 | 2,518,032 |
| MAG05676 | SRR34280936_bin.36 | d__Bacteria;p__Patescibacteriota;c__Minisyncoccia;o__UBA9973;f__UBA5272;g__UBA5272;s__ | 89.27 | 0.09 | 25.0 | 18,845 | 462,901 |
| MAG05677 | SRR34280936_bin.37 | d__Bacteria;p__Pseudomonadota;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__TMP-24;s__ | 83.83 | 3.15 | 68.0 | 9,333 | 2,957,320 |
| MAG05678 | SRR34280936_bin.38 | d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Chitinophagales;f__Chitinophagaceae;g__JJ008;s__JJ008 sp002069045 | 91.86 | 0.43 | 38.0 | 23,383 | 2,663,873 |
| MAG05679 | SRR34280936_bin.39 | d__Bacteria;p__Pseudomonadota;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Tabrizicola;s__ | 95.22 | 6.04 | 66.0 | 30,117 | 4,122,847 |
| MAG05680 | SRR34280936_bin.4 | d__Bacteria;p__Pseudomonadota;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Sphingopyxis;s__ | 100.0 | 0.02 | 61.0 | 306,376 | 2,849,604 |
| MAG05681 | SRR34280936_bin.40 | d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Chitinophagales;f__Saprospiraceae;g__JAEUUM01;s__JAEUUM01 sp019694295 | 100.0 | 0.34 | 41.0 | 76,854 | 3,307,992 |
| MAG05682 | SRR34280936_bin.41 | d__Bacteria;p__Pseudomonadota;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Sphingorhabdus_B;s__Sphingorhabdus_B sp020847445 | 99.99 | 0.05 | 61.0 | 1,097,353 | 2,944,289 |
| MAG05683 | SRR34280936_bin.42 | d__Bacteria;p__Pseudomonadota;c__Alphaproteobacteria;o__Rhizobiales;f__Rhizobiaceae;g__Mesorhizobium_G;s__Mesorhizobium_G denitrificans | 63.23 | 1.17 | 58.0 | 2,907 | 2,315,346 |
| MAG05684 | SRR34280936_bin.45 | d__Bacteria;p__Myxococcota;c__Polyangia;o__Polyangiales;f__Ga0077539;g__SCUS01;s__ | 80.17 | 2.67 | 72.0 | 5,775 | 7,578,871 |
| MAG05685 | SRR34280936_bin.46 | d__Bacteria;p__Bacteroidota_A;c__Rhodothermia;o__Rhodothermales;f__BA12;g__BA12;s__ | 97.74 | 0.0 | 68.0 | 116,996 | 3,290,658 |
| MAG05686 | SRR34280936_bin.47 | d__Bacteria;p__Verrucomicrobiota;c__Verrucomicrobiia;o__Verrucomicrobiales;f__Verrucomicrobiaceae;g__Prosthecobacter;s__Prosthecobacter sp016795375 | 97.25 | 0.4 | 62.0 | 63,073 | 5,089,282 |
| MAG05687 | SRR34280936_bin.49 | d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__AKYH767-A;f__OLB10;g__OLB10;s__ | 99.43 | 0.09 | 37.0 | 166,629 | 3,179,788 |
| MAG05688 | SRR34280936_bin.5 | d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Chitinophagales;f__Chitinophagaceae;g__Pollutibacter;s__ | 76.79 | 1.62 | 48.0 | 5,099 | 2,706,770 |
| MAG05689 | SRR34280936_bin.50 | d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Chitinophagales;f__Chitinophagaceae;g__Flavihumibacter;s__Flavihumibacter sp020161535 | 86.79 | 0.55 | 49.0 | 23,850 | 3,618,650 |
| MAG05690 | SRR34280936_bin.6 | d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__Gemmatimonadales;f__Gemmatimonadaceae;g__;s__ | 94.62 | 5.27 | 63.0 | 16,584 | 6,498,753 |
| MAG05691 | SRR34280936_bin.7 | d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Chitinophagales;f__Chitinophagaceae;g__UTBCD1;s__UTBCD1 sp018267515 | 99.05 | 0.05 | 39.0 | 118,209 | 3,186,124 |
| MAG05692 | SRR34280936_bin.8 | d__Bacteria;p__Pseudomonadota;c__Alphaproteobacteria;o__Rhizobiales;f__Rhizobiaceae;g__JANMEX01;s__ | 100.0 | 0.0 | 61.0 | 174,555 | 2,984,051 |
| MAG05693 | SRR34280936_bin.9 | d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Ottowia;s__Ottowia sp018240925 | 68.13 | 3.57 | 70.0 | 6,961 | 2,626,547 |
| ID | Name | Taxonomy | Completeness | Contamination | GC | N50 | Size |