## Fri Dec 12 21:25:55 2025
## emapper-2.1.13
## /data/anaconda3/envs/eggnog-mapper/bin/emapper.py -i /data/result/bins/wyx/qs/new/BYD3_bin.25.fa -m mmseqs --itype genome -o BYD3_bin.25 --output_dir /data/result/bins/wyx/egg/BYD3_bin.25 --cpu 32
##
#query	seed_ortholog	evalue	score	eggNOG_OGs	max_annot_lvl	COG_category	Description	Preferred_name	GOs	EC	KEGG_ko	KEGG_Pathway	KEGG_Module	KEGG_Reaction	KEGG_rclass	BRITE	KEGG_TC	CAZy	BiGG_Reaction	PFAMs
BYD3_k127_1142721_0	269798.CHU_1446	1.465e-299	929.0	COG0013@1|root,COG0013@2|Bacteria,4NFHW@976|Bacteroidetes,47KKH@768503|Cytophagia	976|Bacteroidetes	J	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain	alaS	GO:0003674,GO:0003824,GO:0004812,GO:0004813,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006412,GO:0006418,GO:0006419,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016597,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0031406,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0036094,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043177,GO:0043412,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576	6.1.1.7	ko:K01872	ko00970,map00970	M00359,M00360	R03038	RC00055,RC00523	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	-	-	-	DHHA1,tRNA-synt_2c,tRNA_SAD
BYD3_k127_1162961_16	1237149.C900_01139	8.362e-187	587.0	COG0468@1|root,COG0468@2|Bacteria,4NEXT@976|Bacteroidetes,47K6D@768503|Cytophagia	976|Bacteroidetes	L	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage	recA	-	-	ko:K03553	ko03440,map03440	M00729	-	-	ko00000,ko00001,ko00002,ko03400	-	-	-	RecA
BYD3_k127_1162961_36	1237149.C900_01141	2.371e-110	367.0	COG4324@1|root,COG4324@2|Bacteria,4NF0V@976|Bacteroidetes,47NVX@768503|Cytophagia	976|Bacteroidetes	I	Putative aminopeptidase	-	-	-	-	-	-	-	-	-	-	-	-	Aminopep
BYD3_k127_1162961_35	1237149.C900_01143	3.729e-117	379.0	COG0745@1|root,COG0745@2|Bacteria,4NG7D@976|Bacteroidetes,47MJ5@768503|Cytophagia	976|Bacteroidetes	T	Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain	-	-	-	ko:K07658	ko02020,map02020	M00434	-	-	ko00000,ko00001,ko00002,ko02022	-	-	-	Response_reg,Trans_reg_C
BYD3_k127_1162961_29	1237149.C900_01144	5.511e-135	439.0	COG5002@1|root,COG5002@2|Bacteria,4NETP@976|Bacteroidetes,47JX1@768503|Cytophagia	976|Bacteroidetes	T	PFAM Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase	phoR	-	2.7.13.3	ko:K07636	ko02020,map02020	M00434	-	-	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	-	-	-	HATPase_c,HisKA
BYD3_k127_1162961_38	1288963.ADIS_3273	7.151e-91	306.0	COG0564@1|root,COG0564@2|Bacteria,4NHKH@976|Bacteroidetes,47KJC@768503|Cytophagia	976|Bacteroidetes	J	TIGRFAM pseudouridine synthase, RluA family	-	-	5.4.99.23,5.4.99.24	ko:K06179,ko:K06180	-	-	-	-	ko00000,ko01000,ko03009	-	-	-	PseudoU_synth_2
BYD3_k127_1162961_49	1123057.P872_03785	2.009e-62	217.0	COG0102@1|root,COG0102@2|Bacteria,4NNGA@976|Bacteroidetes,47PQ7@768503|Cytophagia	976|Bacteroidetes	J	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly	rplM	-	-	ko:K02871	ko03010,map03010	M00178,M00179	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_L13
BYD3_k127_1162961_56	866536.Belba_1874	1.524e-48	176.0	COG0103@1|root,COG0103@2|Bacteria,4NNN1@976|Bacteroidetes,47Q9B@768503|Cytophagia	976|Bacteroidetes	J	Belongs to the universal ribosomal protein uS9 family	rpsI	GO:0000462,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006139,GO:0006364,GO:0006396,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016070,GO:0016072,GO:0019538,GO:0022613,GO:0022626,GO:0022627,GO:0030490,GO:0032991,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0042254,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904	-	ko:K02996	ko03010,map03010	M00178,M00179	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_S9
BYD3_k127_1162961_32	1237149.C900_00092	9.815e-124	402.0	COG0052@1|root,COG0052@2|Bacteria,4NER0@976|Bacteroidetes,47M3D@768503|Cytophagia	976|Bacteroidetes	J	Belongs to the universal ribosomal protein uS2 family	rpsB	GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904	-	ko:K02967	ko03010,map03010	M00178,M00179	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_S2
BYD3_k127_1162961_31	1237149.C900_00090	2.79e-124	403.0	COG0264@1|root,COG0264@2|Bacteria,4NF03@976|Bacteroidetes,47M4X@768503|Cytophagia	976|Bacteroidetes	J	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome	tsf	GO:0003674,GO:0003676,GO:0003723,GO:0003746,GO:0005488,GO:0006412,GO:0006414,GO:0006518,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576	-	ko:K02357	-	-	-	-	ko00000,ko03012,ko03029	-	-	-	EF_TS
BYD3_k127_1162961_22	1131812.JQMS01000001_gene3132	1.816e-161	520.0	COG1012@1|root,COG1012@2|Bacteria,4NEB7@976|Bacteroidetes,1HXNG@117743|Flavobacteriia,2NT23@237|Flavobacterium	976|Bacteroidetes	C	In Escherichia coli this enzyme appears to be an NAD NADP -dependent succinate semialdehyde dehydrogenase	sad	-	1.2.1.16,1.2.1.20,1.2.1.3,1.2.1.79	ko:K00128,ko:K00135	ko00010,ko00053,ko00071,ko00250,ko00280,ko00310,ko00330,ko00340,ko00350,ko00380,ko00410,ko00561,ko00620,ko00625,ko00650,ko00760,ko00903,ko00981,ko01100,ko01110,ko01120,ko01130,map00010,map00053,map00071,map00250,map00280,map00310,map00330,map00340,map00350,map00380,map00410,map00561,map00620,map00625,map00650,map00760,map00903,map00981,map01100,map01110,map01120,map01130	M00027,M00135	R00264,R00631,R00710,R00713,R00714,R00904,R01752,R01986,R02401,R02549,R02678,R02940,R02957,R03283,R03869,R04065,R04506,R04903,R05050,R05237,R05238,R05286,R06366,R08146	RC00047,RC00071,RC00080,RC00186,RC00218,RC00242,RC00816,RC01500	ko00000,ko00001,ko00002,ko01000	-	-	-	Aldedh
BYD3_k127_1162961_54	504472.Slin_1809	8.482e-52	191.0	COG1983@1|root,COG1983@2|Bacteria,4NS0M@976|Bacteroidetes,47QMV@768503|Cytophagia	976|Bacteroidetes	KT	Putative auto-transporter adhesin, head GIN domain	-	-	-	-	-	-	-	-	-	-	-	-	DUF2807
BYD3_k127_1162961_14	929556.Solca_2890	4.28e-188	597.0	COG0534@1|root,COG0534@2|Bacteria,4NDUF@976|Bacteroidetes,1IQJT@117747|Sphingobacteriia	976|Bacteroidetes	V	Mate efflux family protein	-	-	-	ko:K03327	-	-	-	-	ko00000,ko02000	2.A.66.1	-	-	MatE
BYD3_k127_1162961_43	153721.MYP_1195	3.027e-83	284.0	COG0283@1|root,COG0283@2|Bacteria,4NEMB@976|Bacteroidetes,47K5Q@768503|Cytophagia	976|Bacteroidetes	F	Belongs to the cytidylate kinase family. Type 1 subfamily	cmk	GO:0003674,GO:0003824,GO:0004127,GO:0004592,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006520,GO:0006573,GO:0006575,GO:0006725,GO:0006732,GO:0006753,GO:0006766,GO:0006767,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009081,GO:0009108,GO:0009110,GO:0009117,GO:0009123,GO:0009165,GO:0009987,GO:0015939,GO:0015940,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0016874,GO:0016879,GO:0016881,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019752,GO:0032787,GO:0033317,GO:0034641,GO:0034654,GO:0042364,GO:0042398,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0046939,GO:0046940,GO:0050145,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072330,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605	2.7.4.25	ko:K00945	ko00240,ko01100,map00240,map01100	M00052	R00158,R00512,R01665	RC00002	ko00000,ko00001,ko00002,ko01000	-	-	-	Cytidylate_kin
BYD3_k127_1162961_10	1237149.C900_02255	4.215e-210	661.0	COG1726@1|root,COG1726@2|Bacteria,4NEDQ@976|Bacteroidetes,47M23@768503|Cytophagia	976|Bacteroidetes	C	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol	nqrA	-	1.6.5.8	ko:K00346	-	-	-	-	ko00000,ko01000	-	-	-	NQRA,NQRA_SLBB
BYD3_k127_1162961_18	926556.Echvi_2013	5.573e-172	547.0	COG4658@1|root,COG4658@2|Bacteria,4NFGW@976|Bacteroidetes,47ND4@768503|Cytophagia	976|Bacteroidetes	C	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol	nqrB	-	1.6.5.8	ko:K00347	-	-	-	-	ko00000,ko01000	-	-	-	NQR2_RnfD_RnfE
BYD3_k127_1162961_52	641524.ADICYQ_5188	9.683e-54	197.0	COG2869@1|root,COG2869@2|Bacteria,4NF7A@976|Bacteroidetes,47KUU@768503|Cytophagia	976|Bacteroidetes	C	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol	nqrC	-	1.6.5.8	ko:K00348	-	-	-	-	ko00000,ko01000	-	-	-	FMN_bind
BYD3_k127_1162961_39	1313301.AUGC01000008_gene499	7.289e-89	298.0	COG1347@1|root,COG1347@2|Bacteria,4NGD9@976|Bacteroidetes	976|Bacteroidetes	C	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol	nqrD	-	1.6.5.8	ko:K00349	-	-	-	-	ko00000,ko01000	-	-	-	Rnf-Nqr
BYD3_k127_1162961_41	1279009.ADICEAN_03177	4.652e-86	291.0	COG2209@1|root,COG2209@2|Bacteria,4NEU0@976|Bacteroidetes,47KRI@768503|Cytophagia	976|Bacteroidetes	C	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol	nqrE	-	1.6.5.8	ko:K00350	-	-	-	-	ko00000,ko01000	-	-	-	Rnf-Nqr
BYD3_k127_1162961_55	1120966.AUBU01000012_gene150	3.393e-49	183.0	COG2928@1|root,COG2928@2|Bacteria,4NR4F@976|Bacteroidetes,47QB1@768503|Cytophagia	976|Bacteroidetes	S	Protein of unknown function (DUF502)	-	-	-	-	-	-	-	-	-	-	-	-	DUF502
BYD3_k127_1162961_13	1237149.C900_02247	3.626e-188	595.0	COG0482@1|root,COG0482@2|Bacteria,4NFXZ@976|Bacteroidetes,47KX3@768503|Cytophagia	976|Bacteroidetes	J	Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34	mnmA	-	2.8.1.13	ko:K00566	ko04122,map04122	-	R08700	RC02313,RC02315	ko00000,ko00001,ko01000,ko03016	-	-	-	tRNA_Me_trans
BYD3_k127_1162961_30	1124780.ANNU01000024_gene3114	2.573e-134	439.0	COG0526@1|root,COG0526@2|Bacteria,4PMB3@976|Bacteroidetes,47JVX@768503|Cytophagia	976|Bacteroidetes	CO	Redoxin	-	-	-	-	-	-	-	-	-	-	-	-	AhpC-TSA,Redoxin
BYD3_k127_1162961_33	1237149.C900_02241	2.763e-121	400.0	COG1804@1|root,COG1804@2|Bacteria,4NEA8@976|Bacteroidetes,47NJE@768503|Cytophagia	976|Bacteroidetes	C	CoA-transferase family III	-	-	-	-	-	-	-	-	-	-	-	-	CoA_transf_3
BYD3_k127_1162961_53	1237149.C900_02239	5.796e-53	190.0	COG2001@1|root,COG2001@2|Bacteria,4NM4X@976|Bacteroidetes,47Q53@768503|Cytophagia	976|Bacteroidetes	K	Belongs to the MraZ family	mraZ	GO:0000976,GO:0001067,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0006355,GO:0008150,GO:0009889,GO:0009890,GO:0009892,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0019219,GO:0019222,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031333,GO:0043254,GO:0043565,GO:0044087,GO:0044212,GO:0045892,GO:0045934,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051128,GO:0051129,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:0140110,GO:1901363,GO:1902679,GO:1903506,GO:1903507,GO:1990837,GO:2000112,GO:2000113,GO:2000142,GO:2000143,GO:2001141	-	ko:K03925	-	-	-	-	ko00000	-	-	-	MraZ
BYD3_k127_1162961_34	1237149.C900_02238	2.871e-119	390.0	COG0275@1|root,COG0275@2|Bacteria,4NFQB@976|Bacteroidetes,47JJ6@768503|Cytophagia	976|Bacteroidetes	J	Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA	rsmH	GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016434,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0070475,GO:0071424,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360	2.1.1.199	ko:K03438	-	-	-	-	ko00000,ko01000,ko03009	-	-	-	Methyltransf_5
BYD3_k127_1162961_57	1279009.ADICEAN_01305	2.22e-33	133.0	2ADW0@1|root,313N0@2|Bacteria,4NSUW@976|Bacteroidetes,47R7E@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_1162961_3	1237149.C900_02236	1.118e-294	918.0	COG0768@1|root,COG0768@2|Bacteria,4NERV@976|Bacteroidetes,47K6U@768503|Cytophagia	976|Bacteroidetes	M	Cell division protein FtsI penicillin-binding protein 2	ftsI	-	3.4.16.4	ko:K03587	ko00550,ko01501,map00550,map01501	-	-	-	ko00000,ko00001,ko01000,ko01011,ko03036	-	-	-	PASTA,PBP_dimer,Transpeptidase
BYD3_k127_1162961_8	1237149.C900_02235	6.686e-218	685.0	COG0769@1|root,COG0769@2|Bacteria,4NE9W@976|Bacteroidetes,47JT3@768503|Cytophagia	976|Bacteroidetes	M	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan	murE	-	6.3.2.13	ko:K01928	ko00300,ko00550,map00300,map00550	-	R02788	RC00064,RC00090	ko00000,ko00001,ko01000,ko01011	-	-	-	Mur_ligase,Mur_ligase_C,Mur_ligase_M
BYD3_k127_1162961_11	1237149.C900_02234	4.33e-197	620.0	COG0472@1|root,COG0472@2|Bacteria,4NE0T@976|Bacteroidetes,47KEP@768503|Cytophagia	976|Bacteroidetes	M	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan	mraY	-	2.7.8.13	ko:K01000	ko00550,ko01100,ko01502,map00550,map01100,map01502	-	R05629,R05630	RC00002,RC02753	ko00000,ko00001,ko01000,ko01011	9.B.146	-	-	Glycos_transf_4,MraY_sig1
BYD3_k127_1162961_20	1237149.C900_02233	6.357e-164	527.0	COG0771@1|root,COG0771@2|Bacteria,4NEFF@976|Bacteroidetes,47KTX@768503|Cytophagia	976|Bacteroidetes	M	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)	murD	-	6.3.2.9	ko:K01925	ko00471,ko00550,ko01100,map00471,map00550,map01100	-	R02783	RC00064,RC00141	ko00000,ko00001,ko01000,ko01011	-	-	-	Mur_ligase_C,Mur_ligase_M
BYD3_k127_1162961_12	1237149.C900_02232	3.049e-188	594.0	COG0772@1|root,COG0772@2|Bacteria,4NFIM@976|Bacteroidetes,47K3R@768503|Cytophagia	976|Bacteroidetes	D	Belongs to the SEDS family	ftsW	-	-	ko:K03588	ko04112,map04112	-	-	-	ko00000,ko00001,ko02000,ko03036	2.A.103.1	-	-	FTSW_RODA_SPOVE
BYD3_k127_1162961_24	1237149.C900_02231	1.154e-144	469.0	COG0707@1|root,COG0707@2|Bacteria,4NE6D@976|Bacteroidetes,47JXF@768503|Cytophagia	976|Bacteroidetes	M	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)	murG	-	2.4.1.227	ko:K02563	ko00550,ko01100,ko01502,ko04112,map00550,map01100,map01502,map04112	-	R05032,R05662	RC00005,RC00049	ko00000,ko00001,ko01000,ko01011	-	GT28	-	Glyco_tran_28_C,Glyco_transf_28
BYD3_k127_1162961_19	1237149.C900_02230	9.077e-170	544.0	COG0773@1|root,COG0773@2|Bacteria,4NE1V@976|Bacteroidetes,47KY0@768503|Cytophagia	976|Bacteroidetes	M	Belongs to the MurCDEF family	murC	-	6.3.2.8	ko:K01924	ko00471,ko00550,ko01100,map00471,map00550,map01100	-	R03193	RC00064,RC00141	ko00000,ko00001,ko01000,ko01011	-	-	-	Mur_ligase,Mur_ligase_C,Mur_ligase_M
BYD3_k127_1162961_46	1237149.C900_02229	1.832e-73	256.0	COG1589@1|root,COG1589@2|Bacteria,4NGPN@976|Bacteroidetes,47PU4@768503|Cytophagia	976|Bacteroidetes	M	Cell division protein	ftsQ	-	-	ko:K03589	ko04112,map04112	-	-	-	ko00000,ko00001,ko03036	-	-	-	FtsQ
BYD3_k127_1162961_5	1237149.C900_02228	2.124e-227	710.0	COG0849@1|root,COG0849@2|Bacteria,4NE0V@976|Bacteroidetes,47K6I@768503|Cytophagia	976|Bacteroidetes	D	Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring	ftsA	-	-	ko:K03590	ko04112,map04112	-	-	-	ko00000,ko00001,ko03036,ko04812	-	-	-	FtsA,SHS2_FTSA
BYD3_k127_1162961_27	641524.ADICYQ_2547	1.181e-136	451.0	COG0206@1|root,COG0206@2|Bacteria,4NF8N@976|Bacteroidetes,47MUN@768503|Cytophagia	976|Bacteroidetes	D	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity	ftsZ	-	-	ko:K03531	ko04112,map04112	-	-	-	ko00000,ko00001,ko02048,ko03036,ko04812	-	-	-	FtsZ_C,Tubulin
BYD3_k127_1162961_6	1124780.ANNU01000021_gene2964	2.359e-225	732.0	COG3857@1|root,COG3857@2|Bacteria,4PKEH@976|Bacteroidetes,47YDH@768503|Cytophagia	976|Bacteroidetes	L	PD-(D/E)XK nuclease superfamily	-	-	-	-	-	-	-	-	-	-	-	-	Exonuc_V_gamma,PDDEXK_1
BYD3_k127_1162961_1	1237149.C900_02379	0.0	1110.0	COG0556@1|root,COG0556@2|Bacteria,4NE6E@976|Bacteroidetes,47KBV@768503|Cytophagia	976|Bacteroidetes	L	damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage	uvrB	-	-	ko:K03702	ko03420,map03420	-	-	-	ko00000,ko00001,ko03400	-	-	-	Helicase_C,ResIII,UVR,UvrB
BYD3_k127_1162961_44	1124780.ANNU01000006_gene2811	4.467e-78	268.0	COG0169@1|root,COG0169@2|Bacteria,4NEBJ@976|Bacteroidetes,47JZN@768503|Cytophagia	976|Bacteroidetes	E	PFAM Shikimate dehydrogenase substrate binding domain	aroE	-	1.1.1.25	ko:K00014	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	M00022	R02413	RC00206	ko00000,ko00001,ko00002,ko01000	-	-	-	Shikimate_dh_N
BYD3_k127_1162961_47	643867.Ftrac_2673	7.605e-70	247.0	COG2035@1|root,COG2035@2|Bacteria,4NFKI@976|Bacteroidetes,47MKT@768503|Cytophagia	976|Bacteroidetes	S	Domain of unknown function (DUF368)	-	-	-	ko:K08974	-	-	-	-	ko00000	-	-	-	DUF368
BYD3_k127_1162961_26	1237149.C900_02373	1.206e-139	447.0	COG1809@1|root,COG1809@2|Bacteria,4NEHT@976|Bacteroidetes,47MRM@768503|Cytophagia	976|Bacteroidetes	S	PFAM (2R)-phospho-3-sulfolactate synthase ComA	-	-	4.4.1.19	ko:K08097	ko00680,ko01120,map00680,map01120	M00358	R07476	RC01799	ko00000,ko00001,ko00002,ko01000	-	-	-	ComA
BYD3_k127_1162961_9	1237149.C900_02372	4.662e-216	678.0	COG0457@1|root,COG0457@2|Bacteria,4NG1I@976|Bacteroidetes,47M8A@768503|Cytophagia	976|Bacteroidetes	NU	PFAM Tetratricopeptide repeat	-	-	-	-	-	-	-	-	-	-	-	-	TPR_1,TPR_16,TPR_19,TPR_2,TPR_6,TPR_7,TPR_8
BYD3_k127_1162961_42	1237149.C900_02371	5.266e-86	295.0	COG0451@1|root,COG0451@2|Bacteria,4NFZH@976|Bacteroidetes,47M93@768503|Cytophagia	976|Bacteroidetes	M	PFAM NAD dependent epimerase dehydratase family	-	-	1.1.1.219	ko:K00091	-	-	-	-	ko00000,ko01000	-	-	-	Epimerase,NAD_binding_4
BYD3_k127_1162961_45	1237149.C900_02370	2.599e-76	262.0	COG4464@1|root,COG4464@2|Bacteria,4NMUT@976|Bacteroidetes,47PBY@768503|Cytophagia	976|Bacteroidetes	GM	capsular polysaccharide biosynthesis protein	-	-	3.1.3.48	ko:K01104	-	-	-	-	ko00000,ko01000	-	-	-	-
BYD3_k127_1162961_7	1237149.C900_02369	1.528e-221	710.0	COG0489@1|root,COG3206@1|root,COG0489@2|Bacteria,COG3206@2|Bacteria,4NEXU@976|Bacteroidetes,47JQC@768503|Cytophagia	976|Bacteroidetes	DM	TIGRFAM capsular exopolysaccharide family	-	-	-	-	-	-	-	-	-	-	-	-	AAA_31,CbiA,GNVR,Wzz
BYD3_k127_1162961_50	1237149.C900_02368	8.509e-62	221.0	COG1596@1|root,COG1596@2|Bacteria,4NPJB@976|Bacteroidetes,47Q04@768503|Cytophagia	976|Bacteroidetes	M	Polysaccharide biosynthesis/export protein	-	-	-	ko:K01991	ko02026,map02026	-	-	-	ko00000,ko00001,ko02000	1.B.18	-	-	Poly_export
BYD3_k127_1162961_48	1237149.C900_02367	2.587e-66	231.0	COG1898@1|root,COG1898@2|Bacteria,4NNKW@976|Bacteroidetes,47PQR@768503|Cytophagia	976|Bacteroidetes	M	Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4- hexulose	rfbC	-	5.1.3.13	ko:K01790	ko00521,ko00523,ko01130,map00521,map00523,map01130	M00793	R06514	RC01531	ko00000,ko00001,ko00002,ko01000	-	-	-	dTDP_sugar_isom
BYD3_k127_1162961_23	1237149.C900_02366	4.522e-149	479.0	COG0438@1|root,COG0438@2|Bacteria,4NEX8@976|Bacteroidetes,47KFQ@768503|Cytophagia	976|Bacteroidetes	M	Glycosyl transferase 4-like	-	-	-	ko:K13004	-	-	-	-	ko00000,ko01000,ko01003,ko01005	-	GT4	-	Glyco_trans_1_4,Glyco_trans_4_2,Glyco_transf_4,Glycos_transf_1
BYD3_k127_1162961_25	1237149.C900_02365	6.26e-143	463.0	COG2262@1|root,COG2262@2|Bacteria,4NF0P@976|Bacteroidetes,47JGI@768503|Cytophagia	976|Bacteroidetes	S	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis	hflX	-	-	ko:K03665	-	-	-	-	ko00000,ko03009	-	-	-	GTP-bdg_M,GTP-bdg_N,MMR_HSR1
BYD3_k127_1162961_0	1237149.C900_00735	0.0	1505.0	COG0457@1|root,COG4995@1|root,COG0457@2|Bacteria,COG4995@2|Bacteria,4NKPZ@976|Bacteroidetes,47N11@768503|Cytophagia	976|Bacteroidetes	S	CHAT domain	-	-	-	-	-	-	-	-	-	-	-	-	CHAT,TPR_10,TPR_12
BYD3_k127_1162961_2	1237149.C900_00734	0.0	1067.0	COG2185@1|root,COG2185@2|Bacteria,4NFS0@976|Bacteroidetes,47JW5@768503|Cytophagia	976|Bacteroidetes	I	Methylmalonyl-CoA mutase	mutB	-	5.4.99.2	ko:K01847	ko00280,ko00630,ko00640,ko00720,ko01100,ko01120,ko01200,map00280,map00630,map00640,map00720,map01100,map01120,map01200	M00373,M00376,M00741	R00833	RC00395	ko00000,ko00001,ko00002,ko01000	-	-	-	B12-binding,MM_CoA_mutase
BYD3_k127_1162961_51	1237149.C900_00733	9.01e-54	203.0	COG1884@1|root,COG1884@2|Bacteria,4NDVE@976|Bacteroidetes,47JP5@768503|Cytophagia	976|Bacteroidetes	I	Methylmalonyl-CoA mutase N-terminal domain subunit	mutA	-	5.4.99.2	ko:K01847	ko00280,ko00630,ko00640,ko00720,ko01100,ko01120,ko01200,map00280,map00630,map00640,map00720,map01100,map01120,map01200	M00373,M00376,M00741	R00833	RC00395	ko00000,ko00001,ko00002,ko01000	-	-	-	MM_CoA_mutase
BYD3_k127_1162961_15	926556.Echvi_0001	3.173e-187	595.0	COG0593@1|root,COG0593@2|Bacteria,4NE6Q@976|Bacteroidetes,47KR6@768503|Cytophagia	976|Bacteroidetes	L	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids	dnaA	GO:0003674,GO:0003676,GO:0003677,GO:0003688,GO:0003690,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006270,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0016020,GO:0034641,GO:0034645,GO:0043170,GO:0043565,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0071944,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901576,GO:1990837	-	ko:K02313	ko02020,ko04112,map02020,map04112	-	-	-	ko00000,ko00001,ko03032,ko03036	-	-	-	Bac_DnaA,Bac_DnaA_C,DnaA_N
BYD3_k127_1162961_28	1237149.C900_01113	1.737e-136	449.0	COG0265@1|root,COG0265@2|Bacteria	2|Bacteria	O	serine-type endopeptidase activity	degQ	-	3.4.21.107	ko:K04771	ko01503,ko02020,map01503,map02020	M00728	-	-	ko00000,ko00001,ko00002,ko01000,ko01002,ko03110	-	-	-	PDZ_2,Trypsin_2
BYD3_k127_1162961_4	1237149.C900_01115	1.542e-246	769.0	COG0318@1|root,COG0318@2|Bacteria,4NDYR@976|Bacteroidetes,47JUW@768503|Cytophagia	976|Bacteroidetes	IQ	PFAM GH3 auxin-responsive promoter	-	-	-	-	-	-	-	-	-	-	-	-	GH3
BYD3_k127_1162961_17	1237149.C900_01117	1.999e-186	588.0	COG0743@1|root,COG0743@2|Bacteria,4NG0S@976|Bacteroidetes,47K0A@768503|Cytophagia	976|Bacteroidetes	I	Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP)	dxr	GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0006081,GO:0006082,GO:0006090,GO:0006629,GO:0006644,GO:0006720,GO:0006721,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0008654,GO:0009058,GO:0009240,GO:0009987,GO:0016114,GO:0016491,GO:0016614,GO:0016616,GO:0019288,GO:0019637,GO:0019682,GO:0019752,GO:0030145,GO:0030604,GO:0032787,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0046490,GO:0046872,GO:0046914,GO:0048037,GO:0050661,GO:0050662,GO:0051483,GO:0051484,GO:0055114,GO:0070402,GO:0071704,GO:0090407,GO:0097159,GO:1901135,GO:1901265,GO:1901363,GO:1901576	1.1.1.267	ko:K00099	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	M00096	R05688	RC01452	ko00000,ko00001,ko00002,ko01000	-	-	-	DXPR_C,DXP_redisom_C,DXP_reductoisom
BYD3_k127_1162961_21	1237149.C900_01118	4.553e-162	521.0	COG0750@1|root,COG0750@2|Bacteria,4NEAR@976|Bacteroidetes,47JDH@768503|Cytophagia	976|Bacteroidetes	M	zinc metalloprotease	rseP	-	-	ko:K11749	ko02024,ko04112,map02024,map04112	-	-	-	ko00000,ko00001,ko01000,ko01002	-	-	-	PDZ,PDZ_2,Peptidase_M50
BYD3_k127_1162961_59	758.BBIX01000008_gene1500	9.344e-07	50.0	2ATIV@1|root,31J2V@2|Bacteria,1QI4I@1224|Proteobacteria,1TFY1@1236|Gammaproteobacteria,1YAFM@135625|Pasteurellales	135625|Pasteurellales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_1162961_60	1203605.HMPREF1531_01593	0.0002003	45.0	COG1752@1|root,COG1752@2|Bacteria,2GNBM@201174|Actinobacteria,4DQEF@85009|Propionibacteriales	201174|Actinobacteria	S	Patatin-like phospholipase	-	GO:0003674,GO:0003824,GO:0016787	-	ko:K07001	-	-	-	-	ko00000	-	-	-	Patatin
BYD3_k127_1162961_37	1379698.RBG1_1C00001G0607	5.907e-101	354.0	COG0457@1|root,COG0515@1|root,COG0457@2|Bacteria,COG0515@2|Bacteria,2NQNE@2323|unclassified Bacteria	2|Bacteria	T	Serine threonine protein kinase	-	-	2.7.11.1	ko:K12132	-	-	-	-	ko00000,ko01000,ko01001	-	-	-	PASTA,Pkinase,TPR_2,TPR_8
BYD3_k127_1162961_40	1123277.KB893195_gene5662	2.269e-86	287.0	COG1529@1|root,COG1529@2|Bacteria,4NFFU@976|Bacteroidetes,47N2K@768503|Cytophagia	976|Bacteroidetes	C	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain	-	-	1.3.99.16	ko:K07303	-	-	-	-	ko00000,ko01000	-	-	-	Ald_Xan_dh_C,Ald_Xan_dh_C2
BYD3_k127_1179829_16	1198114.AciX9_1579	1.371e-13	79.0	COG1413@1|root,COG1413@2|Bacteria,3Y81E@57723|Acidobacteria,2JNMC@204432|Acidobacteriia	204432|Acidobacteriia	C	lyase activity	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_1179829_13	1239962.C943_00992	1.597e-37	149.0	2C852@1|root,32YB2@2|Bacteria,4NM63@976|Bacteroidetes,47S6T@768503|Cytophagia	976|Bacteroidetes	S	Domain of unknown function (DUF4136)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4136
BYD3_k127_1179829_11	616991.JPOO01000003_gene54	2.857e-41	153.0	2DCU1@1|root,32U0B@2|Bacteria,4NV6G@976|Bacteroidetes,1I5R4@117743|Flavobacteriia	976|Bacteroidetes	S	Stress responsive A/B Barrel Domain	-	-	-	-	-	-	-	-	-	-	-	-	Dabb
BYD3_k127_1179829_6	1122605.KB893625_gene2131	9.186e-172	558.0	COG3119@1|root,COG3119@2|Bacteria,4NE9D@976|Bacteroidetes,1IVHS@117747|Sphingobacteriia	976|Bacteroidetes	P	Sulfatase	-	-	-	-	-	-	-	-	-	-	-	-	Sulfatase
BYD3_k127_1179829_4	1121875.KB907548_gene1609	6.645e-186	595.0	COG3119@1|root,COG3119@2|Bacteria,4NEBN@976|Bacteroidetes,1HZSK@117743|Flavobacteriia	976|Bacteroidetes	P	sulfatase	-	-	-	-	-	-	-	-	-	-	-	-	Sulfatase
BYD3_k127_1179829_8	1121373.KB903644_gene3380	8.526e-73	258.0	COG0642@1|root,COG2205@2|Bacteria,4NG0Y@976|Bacteroidetes,47JUV@768503|Cytophagia	976|Bacteroidetes	T	Histidine kinase	-	-	-	-	-	-	-	-	-	-	-	-	HATPase_c,HisKA,PAS_4,PAS_9,Response_reg
BYD3_k127_1179829_9	1202532.FF52_16953	3.216e-72	248.0	COG4430@1|root,COG4430@2|Bacteria,4NN4Z@976|Bacteroidetes,1I213@117743|Flavobacteriia,2NT1W@237|Flavobacterium	976|Bacteroidetes	S	Bacteriocin-protection protein	-	-	-	-	-	-	-	-	-	-	-	-	OmdA
BYD3_k127_1179829_7	1237149.C900_00330	1.739e-98	324.0	COG1335@1|root,COG1335@2|Bacteria,4NKPP@976|Bacteroidetes,47PIR@768503|Cytophagia	976|Bacteroidetes	Q	Isochorismatase family	pncA	-	3.5.1.19	ko:K08281	ko00760,ko01100,map00760,map01100	-	R01268	RC00100	ko00000,ko00001,ko01000	-	-	-	Isochorismatase
BYD3_k127_1179829_2	1237149.C900_00331	4.667e-225	704.0	COG1488@1|root,COG1488@2|Bacteria,4NFQK@976|Bacteroidetes,47MZ6@768503|Cytophagia	976|Bacteroidetes	H	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP	pncB	-	6.3.4.21	ko:K00763	ko00760,ko01100,map00760,map01100	-	R01724	RC00033	ko00000,ko00001,ko01000	-	-	-	NAPRTase
BYD3_k127_1179829_10	1200792.AKYF01000023_gene938	2.34e-41	158.0	COG2318@1|root,COG2318@2|Bacteria,1V95A@1239|Firmicutes,4HJF3@91061|Bacilli,26TKB@186822|Paenibacillaceae	91061|Bacilli	S	DinB superfamily	-	-	-	-	-	-	-	-	-	-	-	-	DinB_2
BYD3_k127_1179829_14	616991.JPOO01000001_gene4468	4.22e-37	145.0	COG3603@1|root,COG3603@2|Bacteria	2|Bacteria	S	ACT domain	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_1179829_12	1191523.MROS_0076	2.478e-38	147.0	COG3254@1|root,COG3254@2|Bacteria	2|Bacteria	S	rhamnose metabolic process	rhaU	-	5.1.3.32	ko:K03534	-	-	R10819	RC00563	ko00000,ko01000	-	-	-	rhaM
BYD3_k127_1179829_1	382464.ABSI01000007_gene4159	1.214e-320	1010.0	COG3250@1|root,COG3250@2|Bacteria,46TJM@74201|Verrucomicrobia,2IVDN@203494|Verrucomicrobiae	203494|Verrucomicrobiae	G	alpha-L-rhamnosidase	-	-	-	-	-	-	-	-	-	-	-	-	Glyco_hydro_106
BYD3_k127_1179829_0	1121904.ARBP01000002_gene7112	0.0	1030.0	COG1629@1|root,COG4771@2|Bacteria,4P1Z5@976|Bacteroidetes,47JHW@768503|Cytophagia	976|Bacteroidetes	P	PFAM TonB-dependent Receptor Plug	-	-	-	-	-	-	-	-	-	-	-	-	CarbopepD_reg_2,Plug,TonB_dep_Rec
BYD3_k127_1179829_5	1121904.ARBP01000002_gene7111	2.617e-183	591.0	COG0436@1|root,COG0436@2|Bacteria,4NEN3@976|Bacteroidetes,47MR5@768503|Cytophagia	976|Bacteroidetes	E	RagB SusD	-	-	-	ko:K21572	-	-	-	-	ko00000,ko02000	8.A.46.1,8.A.46.3	-	-	SusD-like_3,SusD_RagB
BYD3_k127_1179829_3	1380600.AUYN01000001_gene2311	9.577e-222	696.0	COG2931@1|root,COG2931@2|Bacteria,4PKJU@976|Bacteroidetes,1IJB7@117743|Flavobacteriia	976|Bacteroidetes	Q	PAP2 superfamily	-	-	-	-	-	-	-	-	-	-	-	-	PAP2
BYD3_k127_1179829_15	880073.Calab_0598	7.187e-26	112.0	COG0399@1|root,COG0399@2|Bacteria,2NS1A@2323|unclassified Bacteria	2|Bacteria	M	23S rRNA-intervening sequence protein	-	-	2.6.1.102	ko:K13010	ko00520,map00520	-	R10460	RC00006,RC00781	ko00000,ko00001,ko01000,ko01005,ko01007	-	-	-	23S_rRNA_IVP,DegT_DnrJ_EryC1
BYD3_k127_1226755_5	1121904.ARBP01000011_gene1462	2.144e-56	203.0	COG3637@1|root,COG3637@2|Bacteria,4NTRC@976|Bacteroidetes,47SSV@768503|Cytophagia	976|Bacteroidetes	M	Outer membrane protein beta-barrel domain	-	-	-	-	-	-	-	-	-	-	-	-	OMP_b-brl
BYD3_k127_1226755_11	1121904.ARBP01000003_gene6560	2.077e-37	145.0	2CWBN@1|root,32SZD@2|Bacteria,4NU6S@976|Bacteroidetes,47VSE@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_1226755_9	1239962.C943_00989	3.295e-39	153.0	COG1309@1|root,COG1309@2|Bacteria	2|Bacteria	K	transcriptional regulator	MA20_20735	-	-	-	-	-	-	-	-	-	-	-	TetR_N
BYD3_k127_1226755_10	1239962.C943_00989	4.944e-38	149.0	COG1309@1|root,COG1309@2|Bacteria	2|Bacteria	K	transcriptional regulator	MA20_20735	-	-	-	-	-	-	-	-	-	-	-	TetR_N
BYD3_k127_1226755_3	1107311.Q767_10125	1.423e-81	278.0	COG3637@1|root,COG3637@2|Bacteria,4NPV9@976|Bacteroidetes,1I47X@117743|Flavobacteriia,2NSX3@237|Flavobacterium	976|Bacteroidetes	M	Outer membrane protein beta-barrel domain	-	-	-	-	-	-	-	-	-	-	-	-	OMP_b-brl_2
BYD3_k127_1226755_0	240016.ABIZ01000001_gene2471	0.0	1175.0	COG3119@1|root,COG3119@2|Bacteria,46UNA@74201|Verrucomicrobia,2IVAJ@203494|Verrucomicrobiae	203494|Verrucomicrobiae	P	Sulfatase	-	-	-	-	-	-	-	-	-	-	-	-	Sulfatase
BYD3_k127_1226755_4	1121875.KB907547_gene2995	9.334e-74	259.0	COG2067@1|root,COG2067@2|Bacteria,4NX18@976|Bacteroidetes,1I5D9@117743|Flavobacteriia	976|Bacteroidetes	I	long-chain fatty acid transport protein	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_1226755_12	1239962.C943_00989	8.635e-28	120.0	COG1309@1|root,COG1309@2|Bacteria	2|Bacteria	K	transcriptional regulator	MA20_20735	-	-	-	-	-	-	-	-	-	-	-	TetR_N
BYD3_k127_1226755_8	1492737.FEM08_31300	4.201e-42	165.0	2DH79@1|root,2ZYMJ@2|Bacteria,4PDHG@976|Bacteroidetes,1IDZ4@117743|Flavobacteriia,2NZI8@237|Flavobacterium	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_1226755_1	1270193.JARP01000001_gene2404	4.37e-181	575.0	COG3746@1|root,COG3746@2|Bacteria,4NH24@976|Bacteroidetes,1HXMY@117743|Flavobacteriia,2NU6X@237|Flavobacterium	976|Bacteroidetes	P	Phosphate-selective porin O and P	-	-	-	-	-	-	-	-	-	-	-	-	Porin_O_P
BYD3_k127_1226755_6	700598.Niako_0012	2.178e-51	187.0	COG3685@1|root,COG3685@2|Bacteria,4NMCT@976|Bacteroidetes,1IY39@117747|Sphingobacteriia	976|Bacteroidetes	S	InterPro IPR010287	-	-	-	-	-	-	-	-	-	-	-	-	DUF892
BYD3_k127_1226755_2	1237149.C900_05041	1.04e-170	543.0	28I6N@1|root,2Z89J@2|Bacteria,4NKPT@976|Bacteroidetes	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_1226755_13	1237149.C900_05042	1.221e-12	67.0	COG2834@1|root,COG2834@2|Bacteria,4NERK@976|Bacteroidetes	976|Bacteroidetes	M	Outer membrane lipoprotein-sorting protein	-	-	-	-	-	-	-	-	-	-	-	-	LolA_like
BYD3_k127_13188_1	748280.NH8B_0968	9.323e-12	74.0	COG1396@1|root,COG2932@1|root,COG1396@2|Bacteria,COG2932@2|Bacteria,1N4SP@1224|Proteobacteria,2VVET@28216|Betaproteobacteria	28216|Betaproteobacteria	K	Peptidase S24-like	-	-	-	-	-	-	-	-	-	-	-	-	HTH_3,Peptidase_S24
BYD3_k127_13188_0	391735.Veis_2863	5.094e-30	122.0	COG3077@1|root,COG3077@2|Bacteria,1NA1R@1224|Proteobacteria,2VUGU@28216|Betaproteobacteria,4AFQJ@80864|Comamonadaceae	28216|Betaproteobacteria	L	RelB antitoxin	-	-	-	ko:K07473	-	-	-	-	ko00000,ko02048	-	-	-	RelB
BYD3_k127_1331754_0	471854.Dfer_1098	0.0	1188.0	COG1629@1|root,COG1629@2|Bacteria,COG4771@2|Bacteria,4NDU8@976|Bacteroidetes,47M35@768503|Cytophagia	976|Bacteroidetes	P	PFAM TonB-dependent Receptor Plug	-	-	-	-	-	-	-	-	-	-	-	-	CarbopepD_reg_2,Plug,TonB_dep_Rec
BYD3_k127_1331754_1	1185876.BN8_03758	2.387e-181	580.0	COG4198@1|root,COG4198@2|Bacteria,4NEQC@976|Bacteroidetes,47M3E@768503|Cytophagia	976|Bacteroidetes	S	Starch-binding associating with outer membrane	-	-	-	-	-	-	-	-	-	-	-	-	SusD-like_2
BYD3_k127_1331754_2	1120968.AUBX01000012_gene2788	1.158e-117	388.0	COG3119@1|root,COG3119@2|Bacteria,4NF21@976|Bacteroidetes,47M38@768503|Cytophagia	976|Bacteroidetes	P	arylsulfatase activity	-	-	-	-	-	-	-	-	-	-	-	-	Metalloenzyme,Phosphodiest,Sulfatase
BYD3_k127_1331754_3	1124780.ANNU01000028_gene1007	2.963e-42	164.0	COG0810@1|root,COG0810@2|Bacteria,4NMG7@976|Bacteroidetes,47KAX@768503|Cytophagia	976|Bacteroidetes	U	Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins	-	-	-	ko:K03832	-	-	-	-	ko00000,ko02000	2.C.1.1	-	-	TonB_C
BYD3_k127_1331754_4	1121897.AUGO01000014_gene3468	9.52e-16	76.0	COG2017@1|root,COG2017@2|Bacteria,4NF5G@976|Bacteroidetes,1HZCR@117743|Flavobacteriia,2NV14@237|Flavobacterium	976|Bacteroidetes	G	Converts alpha-aldose to the beta-anomer	-	-	5.1.3.3	ko:K01785	ko00010,ko00052,ko01100,ko01110,ko01120,ko01130,map00010,map00052,map01100,map01110,map01120,map01130	M00632	R01602,R10619	RC00563	ko00000,ko00001,ko00002,ko01000	-	-	-	Aldose_epim
BYD3_k127_1392878_18	1123242.JH636434_gene3903	1.302e-112	379.0	COG3391@1|root,COG3391@2|Bacteria,2IY6R@203682|Planctomycetes	203682|Planctomycetes	S	amine dehydrogenase activity	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_1392878_45	391587.KAOT1_11462	7.446e-37	160.0	COG0577@1|root,COG0577@2|Bacteria,4NDUK@976|Bacteroidetes,1HX0V@117743|Flavobacteriia	976|Bacteroidetes	V	COG0577 ABC-type antimicrobial peptide transport system permease component	-	-	-	ko:K02004	-	M00258	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	FtsX,MacB_PCD
BYD3_k127_1392878_19	1237149.C900_03841	1.181e-107	351.0	COG0740@1|root,COG0740@2|Bacteria,4NK03@976|Bacteroidetes,47TUG@768503|Cytophagia	976|Bacteroidetes	O	Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins	-	-	3.4.21.92	ko:K01358	ko04112,ko04212,map04112,map04212	-	-	-	ko00000,ko00001,ko01000,ko01002	-	-	-	CLP_protease
BYD3_k127_1392878_54	760192.Halhy_1531	3.344e-13	72.0	2E7UG@1|root,3329H@2|Bacteria,4NW2M@976|Bacteroidetes,1IUHV@117747|Sphingobacteriia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_1392878_41	1123248.KB893327_gene690	2.657e-51	187.0	COG1595@1|root,COG1595@2|Bacteria,4NQJE@976|Bacteroidetes,1ISX5@117747|Sphingobacteriia	976|Bacteroidetes	K	SPTR RNA polymerase, sigma-24 subunit, ECF subfamily	-	-	-	-	-	-	-	-	-	-	-	-	Sigma70_r2
BYD3_k127_1392878_38	1279009.ADICEAN_01022	7.894e-55	201.0	COG0398@1|root,COG0398@2|Bacteria,4NFIC@976|Bacteroidetes,47PGM@768503|Cytophagia	976|Bacteroidetes	S	SNARE associated Golgi protein	-	-	-	-	-	-	-	-	-	-	-	-	SNARE_assoc
BYD3_k127_1392878_43	1267533.KB906733_gene3639	1.129e-46	173.0	COG0494@1|root,COG0494@2|Bacteria	2|Bacteria	L	nUDIX hydrolase	yffH	-	-	-	-	-	-	-	-	-	-	-	DUF4406
BYD3_k127_1392878_26	1121481.AUAS01000003_gene4008	3.608e-91	304.0	COG0494@1|root,COG0494@2|Bacteria,4NHER@976|Bacteroidetes,47MQ4@768503|Cytophagia	976|Bacteroidetes	L	NUDIX domain	nudK	-	-	-	-	-	-	-	-	-	-	-	NUDIX
BYD3_k127_1392878_35	743722.Sph21_2105	4.228e-66	230.0	COG0664@1|root,COG0664@2|Bacteria,4NNEC@976|Bacteroidetes,1J0B3@117747|Sphingobacteriia	976|Bacteroidetes	K	Transcriptional regulator, Crp Fnr family	-	-	-	-	-	-	-	-	-	-	-	-	cNMP_binding
BYD3_k127_1392878_39	742817.HMPREF9449_00730	5.251e-53	193.0	COG5483@1|root,COG5483@2|Bacteria,4NNWS@976|Bacteroidetes,2FXW2@200643|Bacteroidia	976|Bacteroidetes	S	Protein of unknown function, DUF488	-	-	-	-	-	-	-	-	-	-	-	-	DUF488
BYD3_k127_1392878_28	929562.Emtol_1023	1.209e-88	301.0	COG2382@1|root,COG2382@2|Bacteria,4PPBB@976|Bacteroidetes	976|Bacteroidetes	P	Carbohydrate esterase, sialic acid-specific acetylesterase	-	-	-	-	-	-	-	-	-	-	-	-	SASA
BYD3_k127_1392878_13	1150600.ADIARSV_1981	8.907e-150	486.0	COG1086@1|root,COG1086@2|Bacteria,4P26E@976|Bacteroidetes	976|Bacteroidetes	GM	Polysaccharide biosynthesis protein	-	-	-	-	-	-	-	-	-	-	-	-	Polysacc_synt_2
BYD3_k127_1392878_48	700598.Niako_0097	4.595e-29	121.0	COG1310@1|root,COG1310@2|Bacteria,4NTI0@976|Bacteroidetes,1ITYI@117747|Sphingobacteriia	976|Bacteroidetes	S	metal-dependent protease of the PAD1 JAB1 superfamily	-	-	3.13.1.6	ko:K21140	ko04122,map04122	-	R11524	RC00064,RC00090	ko00000,ko00001,ko01000	-	-	-	Prok-JAB
BYD3_k127_1392878_49	1150600.ADIARSV_1983	3.233e-28	116.0	COG1977@1|root,COG1977@2|Bacteria,4NVU9@976|Bacteroidetes,1IZRR@117747|Sphingobacteriia	976|Bacteroidetes	H	ThiS family	-	-	-	ko:K03636	ko04122,map04122	-	-	-	ko00000,ko00001	-	-	-	ThiS
BYD3_k127_1392878_6	700598.Niako_0098	2.676e-189	598.0	COG0476@1|root,COG0607@1|root,COG0476@2|Bacteria,COG0607@2|Bacteria,4NFUD@976|Bacteroidetes,1IPBH@117747|Sphingobacteriia	976|Bacteroidetes	H	UBA THIF-type NAD FAD binding protein	moeZ	-	2.7.7.80,2.8.1.11	ko:K21029,ko:K21147	ko04122,map04122	-	R07459,R07461	RC00043	ko00000,ko00001,ko01000	-	-	-	Rhodanese,ThiF
BYD3_k127_1392878_23	926549.KI421517_gene1076	2.649e-100	334.0	COG0657@1|root,COG0657@2|Bacteria,4NHDX@976|Bacteroidetes,47KJB@768503|Cytophagia	976|Bacteroidetes	I	Carboxylesterase family	-	-	-	-	-	-	-	-	-	-	-	-	Abhydrolase_3,COesterase
BYD3_k127_1392878_24	926562.Oweho_0770	4.68e-99	334.0	COG5263@1|root,COG5263@2|Bacteria,4NJ6B@976|Bacteroidetes,1HX7Q@117743|Flavobacteriia,2PBII@246874|Cryomorphaceae	976|Bacteroidetes	S	WG containing repeat	-	-	-	-	-	-	-	-	-	-	-	-	WG_beta_rep
BYD3_k127_1392878_53	362418.IW19_02120	3.475e-16	78.0	2DS2Y@1|root,33E9X@2|Bacteria,4NY47@976|Bacteroidetes	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_1392878_34	643867.Ftrac_0791	8.591e-70	246.0	COG0834@1|root,COG0834@2|Bacteria,4NQ28@976|Bacteroidetes	2|Bacteria	ET	Pfam Bacterial extracellular solute-binding proteins, family 3	-	-	-	ko:K03406,ko:K07242	ko02020,ko02030,map02020,map02030	-	-	-	ko00000,ko00001,ko02035	2.A.63	-	-	DUF4040,SBP_bac_3
BYD3_k127_1392878_25	1121904.ARBP01000011_gene1474	2.266e-98	327.0	COG1028@1|root,COG1028@2|Bacteria,4NHVK@976|Bacteroidetes,47K2F@768503|Cytophagia	976|Bacteroidetes	IQ	PFAM Short-chain dehydrogenase reductase SDR	-	-	-	-	-	-	-	-	-	-	-	-	adh_short_C2
BYD3_k127_1392878_5	388413.ALPR1_13360	3.743e-212	667.0	COG4225@1|root,COG4225@2|Bacteria,4NJYK@976|Bacteroidetes,47MFS@768503|Cytophagia	976|Bacteroidetes	S	Glycosyl Hydrolase Family 88	-	-	3.2.1.180	ko:K18581	-	-	R10867	RC00049,RC02427	ko00000,ko01000	-	GH88	-	Glyco_hydro_88
BYD3_k127_1392878_40	504472.Slin_0891	2.087e-51	190.0	COG0463@1|root,COG0463@2|Bacteria,4PIJY@976|Bacteroidetes,47WM8@768503|Cytophagia	976|Bacteroidetes	M	Glycosyl transferase, family 2	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_1392878_3	1121904.ARBP01000007_gene3114	2.689e-234	729.0	COG4948@1|root,COG4948@2|Bacteria,4NIIJ@976|Bacteroidetes,47K75@768503|Cytophagia	976|Bacteroidetes	M	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain	-	-	4.2.1.6	ko:K01684	ko00052,ko01100,ko01120,map00052,map01100,map01120	M00552	R03033	RC00543	ko00000,ko00001,ko00002,ko01000	-	-	-	MR_MLE_C,MR_MLE_N
BYD3_k127_1392878_9	1121904.ARBP01000007_gene3113	8.831e-172	542.0	COG0684@1|root,COG0684@2|Bacteria,4NF3M@976|Bacteroidetes,47KRJ@768503|Cytophagia	976|Bacteroidetes	H	Aldolase/RraA	-	-	-	-	-	-	-	-	-	-	-	-	RraA-like
BYD3_k127_1392878_51	143224.JQMD01000002_gene1269	5.054e-21	97.0	COG2197@1|root,COG2197@2|Bacteria,4NU9B@976|Bacteroidetes,1I4Q0@117743|Flavobacteriia	976|Bacteroidetes	KT	cheY-homologous receiver domain	-	-	-	-	-	-	-	-	-	-	-	-	Response_reg
BYD3_k127_1392878_56	102129.Lepto7375DRAFT_2033	1.793e-07	59.0	COG0745@1|root,COG4191@1|root,COG0745@2|Bacteria,COG4191@2|Bacteria,1G07W@1117|Cyanobacteria,1H7H2@1150|Oscillatoriales	1117|Cyanobacteria	T	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase	-	-	-	-	-	-	-	-	-	-	-	-	GAF,HATPase_c,HisKA,PAS_3,PAS_4,PAS_9,Response_reg
BYD3_k127_1392878_57	1530186.JQEY01000001_gene893	2.29e-05	48.0	COG1961@1|root,COG1961@2|Bacteria,1MWCZ@1224|Proteobacteria,2TRIY@28211|Alphaproteobacteria	28211|Alphaproteobacteria	L	Resolvase	-	-	-	-	-	-	-	-	-	-	-	-	Recombinase,Resolvase,Zn_ribbon_recom
BYD3_k127_1392878_17	1237149.C900_04745	6.422e-144	467.0	COG0577@1|root,COG0577@2|Bacteria,4NEBD@976|Bacteroidetes,47KYR@768503|Cytophagia	976|Bacteroidetes	V	ABC-type antimicrobial peptide transport system, permease component	-	-	-	ko:K02004	-	M00258	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	FtsX,MacB_PCD
BYD3_k127_1392878_4	1237149.C900_04746	5.948e-217	678.0	2CD20@1|root,2Z7SQ@2|Bacteria,4NEQ1@976|Bacteroidetes,47MEQ@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_1392878_30	1237149.C900_04747	9.386e-86	288.0	COG4445@1|root,COG4445@2|Bacteria,4NFY4@976|Bacteroidetes,47P6J@768503|Cytophagia	976|Bacteroidetes	FJ	Hydroxylase for synthesis of 2-methylthio-cis-ribozeatin in tRNA	miaE	-	-	ko:K06169	-	-	-	-	ko00000,ko01000,ko03016	-	-	-	MiaE
BYD3_k127_1392878_10	1237149.C900_04748	6.941e-162	531.0	COG4206@1|root,COG4206@2|Bacteria,4NI2R@976|Bacteroidetes,47JRI@768503|Cytophagia	976|Bacteroidetes	H	Putative porin	-	-	-	-	-	-	-	-	-	-	-	-	Porin_10
BYD3_k127_1392878_21	153721.MYP_534	1.242e-101	341.0	COG1663@1|root,COG1663@2|Bacteria,4NE2I@976|Bacteroidetes,47M44@768503|Cytophagia	976|Bacteroidetes	M	Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1- P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA)	lpxK	-	2.7.1.130	ko:K00912	ko00540,ko01100,map00540,map01100	M00060	R04657	RC00002,RC00078	ko00000,ko00001,ko00002,ko01000,ko01005	-	-	-	LpxK
BYD3_k127_1392878_15	1237149.C900_04750	6.594e-148	477.0	COG0327@1|root,COG0327@2|Bacteria,4NF51@976|Bacteroidetes,47JGH@768503|Cytophagia	976|Bacteroidetes	S	Belongs to the GTP cyclohydrolase I type 2 NIF3 family	yqfO	-	-	-	-	-	-	-	-	-	-	-	NIF3
BYD3_k127_1392878_22	1237149.C900_04751	5.202e-101	335.0	COG1579@1|root,COG1579@2|Bacteria,4NE36@976|Bacteroidetes,47JBK@768503|Cytophagia	976|Bacteroidetes	S	Zn-ribbon protein, possibly nucleic acid-binding	-	-	-	ko:K07164	-	-	-	-	ko00000	-	-	-	zf-RING_7
BYD3_k127_1392878_27	1237149.C900_04752	1.164e-90	317.0	COG0457@1|root,COG0457@2|Bacteria,4NG8A@976|Bacteroidetes,47JRE@768503|Cytophagia	976|Bacteroidetes	S	TPR repeat-containing protein	-	-	-	-	-	-	-	-	-	-	-	-	TPR_12,TPR_7,TPR_8
BYD3_k127_1392878_32	1237149.C900_04753	8.044e-83	280.0	COG0406@1|root,COG0406@2|Bacteria,4NFX5@976|Bacteroidetes,47JSV@768503|Cytophagia	976|Bacteroidetes	G	phosphoglycerate mutase family	gpm	-	-	-	-	-	-	-	-	-	-	-	His_Phos_1
BYD3_k127_1392878_42	298386.PBPRB0662	5.467e-49	178.0	COG2050@1|root,COG2050@2|Bacteria,1RGVP@1224|Proteobacteria,1S5WY@1236|Gammaproteobacteria,1XWX9@135623|Vibrionales	135623|Vibrionales	Q	protein possibly involved in aromatic compounds catabolism	ydiI	-	-	-	-	-	-	-	-	-	-	-	4HBT
BYD3_k127_1392878_20	1121904.ARBP01000003_gene6234	3.862e-106	357.0	COG1169@1|root,COG1169@2|Bacteria,4NF6U@976|Bacteroidetes,47K5Z@768503|Cytophagia	976|Bacteroidetes	HQ	PFAM chorismate binding enzyme	entC	-	5.4.4.2	ko:K02361,ko:K02552	ko00130,ko01053,ko01100,ko01110,ko01130,map00130,map01053,map01100,map01110,map01130	M00116	R01717	RC00588	ko00000,ko00001,ko00002,ko01000	-	-	-	Chorismate_bind
BYD3_k127_1392878_7	1124780.ANNU01000019_gene1770	2.935e-180	581.0	COG1165@1|root,COG1165@2|Bacteria,4NETZ@976|Bacteroidetes,47JS5@768503|Cytophagia	976|Bacteroidetes	H	Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate (SEPHCHC)	menD	-	2.2.1.9	ko:K02551	ko00130,ko01100,ko01110,map00130,map01100,map01110	M00116	R08165	RC02186	ko00000,ko00001,ko00002,ko01000	-	-	-	TPP_enzyme_C,TPP_enzyme_M_2,TPP_enzyme_N
BYD3_k127_1392878_14	929703.KE386491_gene1400	1.127e-148	473.0	COG0447@1|root,COG0447@2|Bacteria,4NDXT@976|Bacteroidetes,47JYS@768503|Cytophagia	976|Bacteroidetes	H	Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)	menB	-	4.1.3.36	ko:K01661	ko00130,ko01100,ko01110,map00130,map01100,map01110	M00116	R07263	RC01923	ko00000,ko00001,ko00002,ko01000	-	-	-	ECH_1
BYD3_k127_1392878_33	1124780.ANNU01000019_gene1768	4.755e-81	282.0	COG0318@1|root,COG0318@2|Bacteria,4NEXK@976|Bacteroidetes,47KUG@768503|Cytophagia	976|Bacteroidetes	IQ	Acyl-CoA synthetase (AMP-forming) AMP-acid ligase II	menE	-	6.2.1.26	ko:K01911	ko00130,ko01100,ko01110,map00130,map01100,map01110	M00116	R04030	RC00004,RC00014	ko00000,ko00001,ko00002,ko01000	-	-	-	AMP-binding,AMP-binding_C
BYD3_k127_1392878_50	1168034.FH5T_20910	4.778e-28	117.0	COG0745@1|root,COG0745@2|Bacteria,4NSD3@976|Bacteroidetes,2FSRA@200643|Bacteroidia	976|Bacteroidetes	T	COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain	-	-	-	-	-	-	-	-	-	-	-	-	Response_reg
BYD3_k127_1392878_44	1237149.C900_02524	1.351e-44	171.0	COG1538@1|root,COG1538@2|Bacteria,4NY7T@976|Bacteroidetes,47SZ0@768503|Cytophagia	976|Bacteroidetes	MU	Outer membrane efflux protein	-	-	-	-	-	-	-	-	-	-	-	-	OEP
BYD3_k127_1392878_11	1237149.C900_01986	1.957e-151	505.0	COG0489@1|root,COG3206@1|root,COG0489@2|Bacteria,COG3206@2|Bacteria,4NHKC@976|Bacteroidetes,47K54@768503|Cytophagia	976|Bacteroidetes	M	protein involved in exopolysaccharide biosynthesis	-	-	-	-	-	-	-	-	-	-	-	-	AAA_31,Wzz
BYD3_k127_1392878_31	1237149.C900_01985	1.487e-85	298.0	COG2885@1|root,COG2885@2|Bacteria,4NEND@976|Bacteroidetes,47KG7@768503|Cytophagia	976|Bacteroidetes	M	Belongs to the ompA family	-	-	-	-	-	-	-	-	-	-	-	-	OmpA,PD40
BYD3_k127_1392878_46	1454007.JAUG01000127_gene348	2.758e-34	145.0	COG3064@1|root,COG3064@2|Bacteria,4NM6Q@976|Bacteroidetes,1IQNW@117747|Sphingobacteriia	976|Bacteroidetes	M	Type IX secretion system membrane protein PorP/SprF	-	-	-	-	-	-	-	-	-	-	-	-	PorP_SprF
BYD3_k127_1392878_52	1237149.C900_01983	1.378e-16	97.0	COG3291@1|root,COG4625@1|root,COG3291@2|Bacteria,COG4625@2|Bacteria	2|Bacteria	T	pathogenesis	rhgB	-	4.2.2.23	ko:K07004,ko:K18195	-	-	-	-	ko00000,ko01000	-	PL4	-	CBM-like,CHU_C,He_PIG,PKD,RhgB_N,fn3_3
BYD3_k127_1392878_55	1123508.JH636439_gene1020	1.236e-10	78.0	COG2373@1|root,COG2911@1|root,COG2931@1|root,COG3210@1|root,COG3898@1|root,COG2373@2|Bacteria,COG2911@2|Bacteria,COG2931@2|Bacteria,COG3210@2|Bacteria,COG3898@2|Bacteria,2IY9M@203682|Planctomycetes	203682|Planctomycetes	Q	DNA RNA non-specific endonuclease	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_1392878_37	493475.GARC_2123	2.187e-58	236.0	COG2911@1|root,COG4935@1|root,COG2911@2|Bacteria,COG4935@2|Bacteria,1NJV7@1224|Proteobacteria,1RN7Q@1236|Gammaproteobacteria,465ZC@72275|Alteromonadaceae	1236|Gammaproteobacteria	O	Metallo-peptidase family M12B Reprolysin-like	-	-	-	-	-	-	-	-	-	-	-	-	Reprolysin_4
BYD3_k127_1392878_1	498211.CJA_0127	2.188e-259	896.0	COG3209@1|root,COG3210@1|root,COG3209@2|Bacteria,COG3210@2|Bacteria,1MVV1@1224|Proteobacteria,1RMPT@1236|Gammaproteobacteria,1FI4C@10|Cellvibrio	1236|Gammaproteobacteria	M	Insecticide toxin TcdB middle/N-terminal region	-	-	-	-	-	-	-	-	-	-	-	-	RHS_repeat,SpvB,TcdB_toxin_midN,VCBS
BYD3_k127_1392878_47	1089550.ATTH01000001_gene1531	1.228e-30	144.0	COG2911@1|root,COG3210@1|root,COG3391@1|root,COG2911@2|Bacteria,COG3210@2|Bacteria,COG3391@2|Bacteria,4NTNN@976|Bacteroidetes	976|Bacteroidetes	U	Parallel beta-helix repeats	-	-	-	-	-	-	-	-	-	-	-	-	CHU_C,LTD
BYD3_k127_1392878_29	485918.Cpin_1650	2.672e-88	298.0	COG0217@1|root,COG0217@2|Bacteria,4NE8Y@976|Bacteroidetes,1IQCX@117747|Sphingobacteriia	976|Bacteroidetes	K	transcriptional regulatory protein	yebC	GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464	-	-	-	-	-	-	-	-	-	-	Transcrip_reg
BYD3_k127_1392878_16	743722.Sph21_2638	1.258e-147	477.0	COG0385@1|root,COG0385@2|Bacteria,4NEIM@976|Bacteroidetes,1IP75@117747|Sphingobacteriia	976|Bacteroidetes	S	PFAM Bile acid sodium symporter	-	-	-	ko:K03453	-	-	-	-	ko00000	2.A.28	-	-	SBF
BYD3_k127_1392878_2	760192.Halhy_3701	1.214e-244	762.0	COG4948@1|root,COG4948@2|Bacteria,4NE9A@976|Bacteroidetes,1IPDK@117747|Sphingobacteriia	976|Bacteroidetes	M	Mandelate racemase muconate lactonizing enzyme, N-terminal	-	-	-	-	-	-	-	-	-	-	-	-	MR_MLE_C,MR_MLE_N
BYD3_k127_1392878_12	760192.Halhy_3700	2.292e-150	480.0	COG0684@1|root,COG0684@2|Bacteria,4NF3M@976|Bacteroidetes,1IP7I@117747|Sphingobacteriia	976|Bacteroidetes	M	Pfam:Methyltransf_6	-	-	-	-	-	-	-	-	-	-	-	-	RraA-like
BYD3_k127_1392878_8	388413.ALPR1_17078	6.645e-173	556.0	COG4198@1|root,COG4198@2|Bacteria,4NEAX@976|Bacteroidetes,47Y4U@768503|Cytophagia	976|Bacteroidetes	S	Starch-binding associating with outer membrane	-	-	-	-	-	-	-	-	-	-	-	-	SusD-like_2
BYD3_k127_1392878_0	388413.ALPR1_17083	0.0	1421.0	COG1629@1|root,COG4771@2|Bacteria,4NDU8@976|Bacteroidetes,47Y4V@768503|Cytophagia	976|Bacteroidetes	P	TonB dependent receptor	-	-	-	-	-	-	-	-	-	-	-	-	CarbopepD_reg_2,Plug,STN,TonB_dep_Rec
BYD3_k127_1392878_36	388413.ALPR1_17088	2.701e-60	218.0	COG3712@1|root,COG3712@2|Bacteria,4NREY@976|Bacteroidetes,47Q61@768503|Cytophagia	976|Bacteroidetes	PT	Domain of unknown function (DUF4974)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4974,FecR
BYD3_k127_1431333_5	1434325.AZQN01000003_gene2397	1.142e-05	55.0	COG1629@1|root,COG1629@2|Bacteria,4NDXS@976|Bacteroidetes,47JJJ@768503|Cytophagia	976|Bacteroidetes	P	TonB-dependent Receptor Plug	-	-	-	-	-	-	-	-	-	-	-	-	CarbopepD_reg_2,Plug,STN,TonB_dep_Rec
BYD3_k127_1431333_1	1239962.C943_00368	8.529e-172	544.0	COG0820@1|root,COG0820@2|Bacteria,4NFH5@976|Bacteroidetes,47KHN@768503|Cytophagia	976|Bacteroidetes	J	Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs	rlmN	GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0006139,GO:0006364,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016740,GO:0016741,GO:0022613,GO:0030488,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0070475,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140101,GO:0140102,GO:1901360	2.1.1.192	ko:K06941	-	-	-	-	ko00000,ko01000,ko03009	-	-	-	Fer4_14,Radical_SAM
BYD3_k127_1431333_3	1121904.ARBP01000007_gene3097	7.21e-124	409.0	COG3367@1|root,COG3367@2|Bacteria,4NGXN@976|Bacteroidetes,47NP1@768503|Cytophagia	976|Bacteroidetes	S	Domain of unknown function (DUF1611_N) Rossmann-like domain	-	-	-	-	-	-	-	-	-	-	-	-	DUF1611,DUF1611_N
BYD3_k127_1431333_2	1121904.ARBP01000006_gene4066	5.192e-135	438.0	COG4948@1|root,COG4948@2|Bacteria,4NEBX@976|Bacteroidetes,47N8Q@768503|Cytophagia	976|Bacteroidetes	M	mandelate racemase muconate lactonizing	-	-	-	-	-	-	-	-	-	-	-	-	MR_MLE_C,MR_MLE_N
BYD3_k127_1431333_4	649638.Trad_1254	8.493e-88	310.0	COG2133@1|root,COG2133@2|Bacteria	2|Bacteria	G	pyrroloquinoline quinone binding	-	-	-	-	-	-	-	-	-	-	-	-	CHRD,Malectin
BYD3_k127_1431333_0	926549.KI421517_gene4122	8.13e-172	545.0	COG3507@1|root,COG3507@2|Bacteria,4NEWE@976|Bacteroidetes,47MJY@768503|Cytophagia	976|Bacteroidetes	G	Belongs to the glycosyl hydrolase 43 family	xynB	-	-	-	-	-	-	-	-	-	-	-	Glyco_hydro_43
BYD3_k127_1494367_124	1396141.BATP01000022_gene487	4.116e-49	182.0	COG0398@1|root,COG0398@2|Bacteria,46Z4H@74201|Verrucomicrobia,2IUX8@203494|Verrucomicrobiae	203494|Verrucomicrobiae	S	SNARE associated Golgi protein	-	-	-	-	-	-	-	-	-	-	-	-	SNARE_assoc
BYD3_k127_1494367_114	1403819.BATR01000007_gene229	4.713e-59	207.0	COG3871@1|root,COG3871@2|Bacteria,46VIW@74201|Verrucomicrobia,2IVPR@203494|Verrucomicrobiae	203494|Verrucomicrobiae	S	Pyridoxamine 5'-phosphate oxidase like	-	-	-	-	-	-	-	-	-	-	-	-	Pyrid_ox_like
BYD3_k127_1494367_37	4572.TRIUR3_33762-P1	2.912e-188	593.0	COG0057@1|root,KOG0657@2759|Eukaryota,37HSA@33090|Viridiplantae,3GEIW@35493|Streptophyta,3KST4@4447|Liliopsida,3I5JS@38820|Poales	35493|Streptophyta	G	Belongs to the glyceraldehyde-3-phosphate dehydrogenase family	-	-	1.2.1.12	ko:K00134	ko00010,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04066,ko05010,map00010,map00710,map01100,map01110,map01120,map01130,map01200,map01230,map04066,map05010	M00001,M00002,M00003,M00165,M00166,M00308,M00552	R01061	RC00149	ko00000,ko00001,ko00002,ko01000,ko04131,ko04147	-	-	-	Gp_dh_C,Gp_dh_N
BYD3_k127_1494367_115	1237149.C900_05163	1.233e-58	218.0	COG0484@1|root,COG4783@1|root,COG0484@2|Bacteria,COG4783@2|Bacteria	2|Bacteria	L	chaperone-mediated protein folding	-	-	-	ko:K21010	ko02025,map02025	-	-	-	ko00000,ko00001	-	-	-	DUF560,DnaJ,Dynamin_N,Peptidase_M48,TPR_19,TPR_8
BYD3_k127_1494367_96	1121904.ARBP01000010_gene2373	1.698e-77	268.0	2DGJB@1|root,32U7C@2|Bacteria,4NUFJ@976|Bacteroidetes,47V61@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_1494367_131	1121904.ARBP01000010_gene2374	1.502e-40	162.0	COG5492@1|root,COG5492@2|Bacteria,4PHVH@976|Bacteroidetes,47RH7@768503|Cytophagia	976|Bacteroidetes	N	Electron transfer DM13	-	-	-	-	-	-	-	-	-	-	-	-	Big_2,DM13
BYD3_k127_1494367_38	1237149.C900_00593	1.496e-184	583.0	COG4992@1|root,COG4992@2|Bacteria,4NFMC@976|Bacteroidetes,47JJU@768503|Cytophagia	976|Bacteroidetes	E	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family	argD	-	2.6.1.11,2.6.1.17	ko:K00821	ko00220,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00220,map00300,map01100,map01110,map01120,map01130,map01210,map01230	M00016,M00028,M00845	R02283,R04475	RC00006,RC00062	ko00000,ko00001,ko00002,ko01000,ko01007	-	-	-	Aminotran_3
BYD3_k127_1494367_107	929562.Emtol_0975	6.354e-63	230.0	COG0628@1|root,COG0628@2|Bacteria,4NFHZ@976|Bacteroidetes,47NU0@768503|Cytophagia	976|Bacteroidetes	S	AI-2E family transporter	-	-	-	-	-	-	-	-	-	-	-	-	AI-2E_transport
BYD3_k127_1494367_78	1237149.C900_00595	1.05e-91	304.0	COG5405@1|root,COG5405@2|Bacteria,4NHZ8@976|Bacteroidetes,47MJS@768503|Cytophagia	976|Bacteroidetes	O	Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery	hslV	-	3.4.25.2	ko:K01419	-	-	-	-	ko00000,ko01000,ko01002	-	-	-	Proteasome
BYD3_k127_1494367_33	643867.Ftrac_0743	8.314e-214	676.0	COG0508@1|root,COG0508@2|Bacteria,4NFB9@976|Bacteroidetes,47U8Z@768503|Cytophagia	976|Bacteroidetes	C	The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2)	pdhC	-	2.3.1.12	ko:K00627	ko00010,ko00020,ko00620,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00020,map00620,map01100,map01110,map01120,map01130,map01200	M00307	R00209,R02569	RC00004,RC02742,RC02857	br01601,ko00000,ko00001,ko00002,ko01000	-	-	-	2-oxoacid_dh,Biotin_lipoyl,E3_binding
BYD3_k127_1494367_13	1237149.C900_00597	6.489e-314	990.0	COG0823@1|root,COG0823@2|Bacteria,4NGPR@976|Bacteroidetes,47MQP@768503|Cytophagia	976|Bacteroidetes	U	Involved in the tonB-independent uptake of proteins	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_1494367_82	1237149.C900_00607	6.632e-88	299.0	2DN4I@1|root,32VGS@2|Bacteria,4NNY4@976|Bacteroidetes,47RGS@768503|Cytophagia	976|Bacteroidetes	S	Domain of unknown function (DUF4249)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4249
BYD3_k127_1494367_8	1237149.C900_00608	0.0	1159.0	COG1629@1|root,COG4771@2|Bacteria,4NF4B@976|Bacteroidetes,47JN3@768503|Cytophagia	976|Bacteroidetes	P	TonB-dependent Receptor Plug	-	-	-	-	-	-	-	-	-	-	-	-	CarbopepD_reg_2,Plug,TonB_dep_Rec
BYD3_k127_1494367_40	1237149.C900_03332	5.62e-177	558.0	COG2159@1|root,COG2159@2|Bacteria,4NIGJ@976|Bacteroidetes,47KJH@768503|Cytophagia	976|Bacteroidetes	S	Amidohydrolase	-	-	4.1.1.45	ko:K03392	ko00380,ko01100,map00380,map01100	M00038	R04323	RC00779	ko00000,ko00001,ko00002,ko01000	-	-	-	Amidohydro_2
BYD3_k127_1494367_123	1237149.C900_03331	8.535e-51	189.0	COG0484@1|root,COG0484@2|Bacteria	2|Bacteria	O	heat shock protein binding	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_1494367_48	1237149.C900_03330	3.176e-157	502.0	COG1054@1|root,COG1054@2|Bacteria,4NEG6@976|Bacteroidetes,47JH6@768503|Cytophagia	976|Bacteroidetes	S	Belongs to the UPF0176 family	yceA	-	-	ko:K07146	-	-	-	-	ko00000	-	-	-	Rhodanese,Rhodanese_C
BYD3_k127_1494367_85	1237149.C900_03329	7.854e-87	290.0	COG0521@1|root,COG0521@2|Bacteria,4PIS5@976|Bacteroidetes,47KA4@768503|Cytophagia	976|Bacteroidetes	H	Probable molybdopterin binding domain	-	-	2.7.7.75	ko:K03831	ko00790,ko01100,ko04122,map00790,map01100,map04122	-	R09726	RC00002	ko00000,ko00001,ko01000	-	-	-	MoCF_biosynth
BYD3_k127_1494367_52	1237149.C900_03328	6.223e-151	482.0	COG0739@1|root,COG0739@2|Bacteria,4NGHH@976|Bacteroidetes,47NA5@768503|Cytophagia	976|Bacteroidetes	M	PFAM Peptidase family M23	-	-	-	-	-	-	-	-	-	-	-	-	Peptidase_M23
BYD3_k127_1494367_83	1237149.C900_01565	4.784e-87	298.0	28MS7@1|root,2ZB0M@2|Bacteria,4NHCQ@976|Bacteroidetes,47JQ9@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_1494367_32	1237149.C900_01564	2.572e-214	696.0	COG0457@1|root,COG4995@1|root,COG0457@2|Bacteria,COG4995@2|Bacteria,4NHCZ@976|Bacteroidetes,47JHF@768503|Cytophagia	976|Bacteroidetes	S	CHAT domain	-	-	-	-	-	-	-	-	-	-	-	-	CHAT,TPR_12,TPR_8
BYD3_k127_1494367_81	1237149.C900_01201	1.096e-88	297.0	COG2518@1|root,COG2518@2|Bacteria,4NFCU@976|Bacteroidetes,47P7V@768503|Cytophagia	976|Bacteroidetes	J	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins	pcm	-	2.1.1.77	ko:K00573	-	-	-	-	ko00000,ko01000	-	-	-	PCMT
BYD3_k127_1494367_47	866536.Belba_1348	9.607e-162	520.0	COG0498@1|root,COG0498@2|Bacteria,4NEAA@976|Bacteroidetes,47KUN@768503|Cytophagia	976|Bacteroidetes	E	Threonine synthase	thrC	-	4.2.3.1	ko:K01733	ko00260,ko00750,ko01100,ko01110,ko01120,ko01230,map00260,map00750,map01100,map01110,map01120,map01230	M00018	R01466,R05086	RC00017,RC00526	ko00000,ko00001,ko00002,ko01000	-	-	-	PALP,Thr_synth_N
BYD3_k127_1494367_67	153721.MYP_1180	6.081e-119	389.0	COG0083@1|root,COG0083@2|Bacteria,4NE2M@976|Bacteroidetes,47KGY@768503|Cytophagia	976|Bacteroidetes	E	Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate	thrB	-	2.7.1.39	ko:K00872	ko00260,ko01100,ko01110,ko01120,ko01230,map00260,map01100,map01110,map01120,map01230	M00018	R01771	RC00002,RC00017	ko00000,ko00001,ko00002,ko01000	-	-	-	GHMP_kinases_C,GHMP_kinases_N
BYD3_k127_1494367_14	866536.Belba_1350	3.658e-311	972.0	COG0460@1|root,COG0527@1|root,COG0460@2|Bacteria,COG0527@2|Bacteria,4NFGR@976|Bacteroidetes,47KEQ@768503|Cytophagia	976|Bacteroidetes	E	TIGRFAM Aspartate kinase	thrA	-	1.1.1.3,2.7.2.4	ko:K12524	ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01230	M00016,M00017,M00018,M00526,M00527	R00480,R01773,R01775	RC00002,RC00043,RC00087	ko00000,ko00001,ko00002,ko01000	-	-	-	AA_kinase,ACT,ACT_7,Homoserine_dh,NAD_binding_3
BYD3_k127_1494367_94	1279009.ADICEAN_03480	3.822e-79	267.0	COG1607@1|root,COG1607@2|Bacteria,4NERA@976|Bacteroidetes,47P9H@768503|Cytophagia	976|Bacteroidetes	I	PFAM thioesterase superfamily	-	-	-	-	-	-	-	-	-	-	-	-	4HBT
BYD3_k127_1494367_10	945713.IALB_0592	0.0	1054.0	COG3808@1|root,COG3808@2|Bacteria	2|Bacteria	C	hydrogen-translocating pyrophosphatase activity	hppA	-	3.6.1.1	ko:K15987	ko00190,map00190	-	-	-	ko00000,ko00001,ko01000	3.A.10.1	-	-	H_PPase,OmpA
BYD3_k127_1494367_125	1237149.C900_01197	4.36e-49	178.0	COG4731@1|root,COG4731@2|Bacteria,4NQCK@976|Bacteroidetes	976|Bacteroidetes	S	protein conserved in bacteria	-	-	-	-	-	-	-	-	-	-	-	-	DUF2147
BYD3_k127_1494367_80	1237149.C900_01196	1.809e-89	299.0	COG1595@1|root,COG1595@2|Bacteria,4NX8R@976|Bacteroidetes,47PIG@768503|Cytophagia	976|Bacteroidetes	K	Sigma-70 region 2	-	-	-	-	-	-	-	-	-	-	-	-	Sigma70_ECF,Sigma70_r2
BYD3_k127_1494367_97	1237149.C900_01193	5.975e-75	261.0	COG2177@1|root,COG2177@2|Bacteria,4NH05@976|Bacteroidetes,47KM1@768503|Cytophagia	976|Bacteroidetes	D	Belongs to the ABC-4 integral membrane protein family. FtsX subfamily	ftsX	GO:0005575,GO:0005618,GO:0005623,GO:0006928,GO:0008150,GO:0009274,GO:0009276,GO:0009605,GO:0009607,GO:0009615,GO:0009987,GO:0030312,GO:0030313,GO:0031975,GO:0040011,GO:0043207,GO:0044464,GO:0048870,GO:0050896,GO:0051179,GO:0051301,GO:0051674,GO:0051704,GO:0051707,GO:0071944,GO:0071976	-	ko:K09811	ko02010,map02010	M00256	-	-	ko00000,ko00001,ko00002,ko02000,ko03036	3.A.1.140	-	-	FtsX
BYD3_k127_1494367_147	643867.Ftrac_0778	2.298e-20	94.0	2DQ4W@1|root,334SC@2|Bacteria,4NUQX@976|Bacteroidetes,47RZV@768503|Cytophagia	976|Bacteroidetes	S	Protein of unknown function (DUF3098)	-	-	-	-	-	-	-	-	-	-	-	-	DUF3098
BYD3_k127_1494367_77	1270196.JCKI01000003_gene1835	3.935e-92	310.0	COG1968@1|root,COG1968@2|Bacteria,4NGIZ@976|Bacteroidetes,1IPDJ@117747|Sphingobacteriia	976|Bacteroidetes	V	Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin	uppP	-	3.6.1.27	ko:K06153	ko00550,map00550	-	R05627	RC00002	ko00000,ko00001,ko01000,ko01011	-	-	-	BacA
BYD3_k127_1494367_92	1237149.C900_01190	1.594e-81	277.0	COG0130@1|root,COG0130@2|Bacteria,4NESK@976|Bacteroidetes,47P98@768503|Cytophagia	976|Bacteroidetes	J	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs	truB	GO:0001522,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016071,GO:0016556,GO:0016853,GO:0016866,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:1901360,GO:1990481	5.4.99.25	ko:K03177	-	-	-	-	ko00000,ko01000,ko03016	-	-	-	TruB_C_2,TruB_N
BYD3_k127_1494367_60	1237149.C900_01189	9.298e-135	435.0	COG0196@1|root,COG0196@2|Bacteria,4NEI9@976|Bacteroidetes,47JNP@768503|Cytophagia	976|Bacteroidetes	H	Belongs to the ribF family	ribF	-	2.7.1.26,2.7.7.2	ko:K11753	ko00740,ko01100,ko01110,map00740,map01100,map01110	M00125	R00161,R00549	RC00002,RC00017	ko00000,ko00001,ko00002,ko01000	-	-	-	FAD_syn,Flavokinase
BYD3_k127_1494367_24	1121481.AUAS01000003_gene4023	1.196e-232	736.0	COG0365@1|root,COG0365@2|Bacteria,4NINZ@976|Bacteroidetes,47MVK@768503|Cytophagia	976|Bacteroidetes	I	AMP-binding enzyme	-	-	6.2.1.16	ko:K01907	ko00280,ko00650,map00280,map00650	-	R01357	RC00004,RC00014	ko00000,ko00001,ko01000,ko01004	-	-	-	ACAS_N,AMP-binding,AMP-binding_C
BYD3_k127_1494367_15	468059.AUHA01000002_gene237	6.113e-287	890.0	COG1132@1|root,COG1132@2|Bacteria,4NEBS@976|Bacteroidetes,1IPIB@117747|Sphingobacteriia	976|Bacteroidetes	V	ABC transporter	-	-	-	ko:K06147	-	-	-	-	ko00000,ko02000	3.A.1.106,3.A.1.109,3.A.1.21	-	-	ABC_membrane,ABC_tran
BYD3_k127_1494367_129	1237149.C900_01186	6.775e-45	166.0	2AGY9@1|root,3176X@2|Bacteria,4NQD4@976|Bacteroidetes,47RA2@768503|Cytophagia	976|Bacteroidetes	S	TIGRFAM Gliding motility-associated protein, GldC	gldC	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_1494367_17	313606.M23134_06801	2.674e-272	867.0	COG1629@1|root,COG4771@2|Bacteria,4NDX3@976|Bacteroidetes,47Y1Q@768503|Cytophagia	976|Bacteroidetes	P	Carboxypeptidase regulatory-like domain	-	-	-	-	-	-	-	-	-	-	-	-	CarbopepD_reg_2,Plug,TonB_dep_Rec
BYD3_k127_1494367_79	1121930.AQXG01000004_gene2877	2.272e-90	317.0	COG2755@1|root,COG2755@2|Bacteria,4NGTK@976|Bacteroidetes	976|Bacteroidetes	E	GDSL family lipolytic protein	-	-	-	-	-	-	-	-	-	-	-	-	Lipase_GDSL
BYD3_k127_1494367_68	880073.Calab_0031	2.503e-118	389.0	COG2017@1|root,COG2017@2|Bacteria,2NQA5@2323|unclassified Bacteria	2|Bacteria	G	Converts alpha-aldose to the beta-anomer	mro	-	5.1.3.3	ko:K01785	ko00010,ko00052,ko01100,ko01110,ko01120,ko01130,map00010,map00052,map01100,map01110,map01120,map01130	M00632	R01602,R10619	RC00563	ko00000,ko00001,ko00002,ko01000	-	-	-	Aldose_epim
BYD3_k127_1494367_39	504472.Slin_6301	1.348e-180	573.0	COG0438@1|root,COG0438@2|Bacteria,4NF9J@976|Bacteroidetes,47P16@768503|Cytophagia	976|Bacteroidetes	M	Glycosyl transferases group 1	-	-	-	-	-	-	-	-	-	-	-	-	Glyco_trans_4_4,Glyco_transf_4,Glycos_transf_1
BYD3_k127_1494367_145	1123057.P872_16060	5.119e-27	115.0	COG0607@1|root,COG0607@2|Bacteria,4NUPH@976|Bacteroidetes,47RW1@768503|Cytophagia	976|Bacteroidetes	P	Rhodanese Homology Domain	-	-	-	-	-	-	-	-	-	-	-	-	Rhodanese
BYD3_k127_1494367_105	1124780.ANNU01000020_gene3294	4.124e-67	237.0	COG1434@1|root,COG1434@2|Bacteria,4NNYV@976|Bacteroidetes,47PRX@768503|Cytophagia	976|Bacteroidetes	S	PFAM DUF218 domain	-	-	-	-	-	-	-	-	-	-	-	-	DUF218
BYD3_k127_1494367_3	1237149.C900_05256	0.0	1258.0	COG1131@1|root,COG1131@2|Bacteria,4NHPD@976|Bacteroidetes,47KQD@768503|Cytophagia	976|Bacteroidetes	V	ABC-2 type transporter	-	-	-	-	-	-	-	-	-	-	-	-	ABC2_membrane,ABC_tran,TerB
BYD3_k127_1494367_73	1237149.C900_05257	1.174e-104	348.0	29N3N@1|root,33SHJ@2|Bacteria,4P1XQ@976|Bacteroidetes,47TMQ@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_1494367_143	1237149.C900_05258	2.346e-28	119.0	COG3437@1|root,COG3437@2|Bacteria,4PKM8@976|Bacteroidetes,47XWF@768503|Cytophagia	976|Bacteroidetes	T	cheY-homologous receiver domain	-	-	-	-	-	-	-	-	-	-	-	-	Response_reg
BYD3_k127_1494367_84	1237149.C900_05318	7.166e-87	294.0	COG3279@1|root,COG3279@2|Bacteria,4NGBF@976|Bacteroidetes,47MTX@768503|Cytophagia	976|Bacteroidetes	KT	Response regulator of the LytR AlgR family	-	-	-	-	-	-	-	-	-	-	-	-	LytTR,Response_reg
BYD3_k127_1494367_101	1237149.C900_05317	1.261e-70	251.0	COG2972@1|root,COG2972@2|Bacteria,4NFDP@976|Bacteroidetes,47N4N@768503|Cytophagia	976|Bacteroidetes	T	PFAM histidine kinase internal region	-	-	-	-	-	-	-	-	-	-	-	-	His_kinase
BYD3_k127_1494367_142	1144313.PMI10_01466	1.336e-28	121.0	COG4270@1|root,COG4270@2|Bacteria,4NQNH@976|Bacteroidetes,1I2M0@117743|Flavobacteriia,2NWUT@237|Flavobacterium	976|Bacteroidetes	S	Membrane	-	-	-	-	-	-	-	-	-	-	-	-	DoxX_2
BYD3_k127_1494367_112	1237149.C900_05315	1.2e-59	213.0	2C9AB@1|root,2ZB91@2|Bacteria,4NKQ3@976|Bacteroidetes,47M3Q@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_1494367_26	1237149.C900_05314	7.848e-229	729.0	COG4206@1|root,COG4206@2|Bacteria,4NGBJ@976|Bacteroidetes,47J8T@768503|Cytophagia	976|Bacteroidetes	H	TonB-dependent Receptor Plug Domain	-	-	-	-	-	-	-	-	-	-	-	-	CarbopepD_reg_2,Plug,TonB_dep_Rec
BYD3_k127_1494367_1	700598.Niako_6939	0.0	1305.0	COG0495@1|root,COG0495@2|Bacteria,4NE5K@976|Bacteroidetes,1IP89@117747|Sphingobacteriia	976|Bacteroidetes	J	Belongs to the class-I aminoacyl-tRNA synthetase family	leuS	GO:0003674,GO:0003824,GO:0004812,GO:0004823,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006429,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576	6.1.1.4	ko:K01869	ko00970,map00970	M00359,M00360	R03657	RC00055,RC00523	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029	-	-	-	Anticodon_1,DUF559,tRNA-synt_1,tRNA-synt_1_2
BYD3_k127_1494367_42	1237149.C900_05642	1.024e-172	546.0	COG0332@1|root,COG0332@2|Bacteria,4NFIN@976|Bacteroidetes,47JAR@768503|Cytophagia	976|Bacteroidetes	I	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids	fabH	-	2.3.1.180	ko:K00648	ko00061,ko01100,ko01212,map00061,map01100,map01212	M00082,M00083	R10707	RC00004,RC02729,RC02888	ko00000,ko00001,ko00002,ko01000,ko01004	-	-	-	ACP_syn_III,ACP_syn_III_C
BYD3_k127_1494367_43	1239962.C943_00594	1.675e-166	533.0	COG2610@1|root,COG2610@2|Bacteria,4NFBD@976|Bacteroidetes,47KJN@768503|Cytophagia	976|Bacteroidetes	EG	TIGRFAM gluconate transporter	gntT	-	-	ko:K06155	-	-	-	-	ko00000,ko02000	2.A.8.1.4	-	-	GntP_permease
BYD3_k127_1494367_99	1120965.AUBV01000003_gene278	1.773e-74	252.0	COG0251@1|root,COG0251@2|Bacteria,4NMAM@976|Bacteroidetes,47P6V@768503|Cytophagia	976|Bacteroidetes	J	PFAM Endoribonuclease L-PSP	-	-	-	-	-	-	-	-	-	-	-	-	YjgF_endoribonc
BYD3_k127_1494367_58	1123248.KB893315_gene3085	1.303e-136	444.0	COG3616@1|root,COG3616@2|Bacteria,4NF5K@976|Bacteroidetes,1IPIR@117747|Sphingobacteriia	976|Bacteroidetes	E	PFAM Alanine racemase, N-terminal	-	-	-	-	-	-	-	-	-	-	-	-	Ala_racemase_N,D-ser_dehydrat
BYD3_k127_1494367_53	391603.FBALC1_02912	9.301e-151	482.0	COG0714@1|root,COG0714@2|Bacteria,4NDVZ@976|Bacteroidetes,1HY4Z@117743|Flavobacteriia	976|Bacteroidetes	S	associated with various cellular activities	-	-	-	ko:K03924	-	-	-	-	ko00000,ko01000	-	-	-	AAA_3
BYD3_k127_1494367_87	1296416.JACB01000005_gene174	2.528e-85	291.0	COG1721@1|root,COG1721@2|Bacteria,4NFX4@976|Bacteroidetes,1HXMB@117743|Flavobacteriia,2YJ42@290174|Aquimarina	976|Bacteroidetes	S	Protein of unknown function DUF58	-	-	-	-	-	-	-	-	-	-	-	-	DUF58
BYD3_k127_1494367_141	1237149.C900_01436	2.969e-29	132.0	28J48@1|root,2Z908@2|Bacteria,4PMAG@976|Bacteroidetes,47S97@768503|Cytophagia	976|Bacteroidetes	S	Aerotolerance regulator N-terminal	-	-	-	-	-	-	-	-	-	-	-	-	BatA
BYD3_k127_1494367_56	1237149.C900_01437	7.15e-139	470.0	COG0803@1|root,COG0803@2|Bacteria,4NHBN@976|Bacteroidetes,47KHC@768503|Cytophagia	976|Bacteroidetes	P	Belongs to the bacterial solute-binding protein 9 family	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_1494367_116	411154.GFO_1934	1.55e-56	218.0	28HMG@1|root,2Z7W1@2|Bacteria,4NI51@976|Bacteroidetes,1HZ85@117743|Flavobacteriia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_1494367_91	1237149.C900_04861	6.712e-83	278.0	COG0727@1|root,COG0727@2|Bacteria,4NEPX@976|Bacteroidetes,47NCP@768503|Cytophagia	976|Bacteroidetes	S	Protein of unknown function (DUF3109)	-	-	-	-	-	-	-	-	-	-	-	-	DUF3109
BYD3_k127_1494367_153	931627.MycrhDRAFT_4481	6.24e-06	57.0	2DBDD@1|root,2Z8JQ@2|Bacteria,2IE96@201174|Actinobacteria,238D8@1762|Mycobacteriaceae	201174|Actinobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_1494367_7	1237149.C900_04864	0.0	1163.0	COG0210@1|root,COG0210@2|Bacteria,4NDWN@976|Bacteroidetes,47JMH@768503|Cytophagia	976|Bacteroidetes	L	PFAM UvrD REP helicase	pcrA	-	3.6.4.12	ko:K03657	ko03420,ko03430,map03420,map03430	-	-	-	ko00000,ko00001,ko01000,ko03400	-	-	-	UvrD-helicase,UvrD_C
BYD3_k127_1494367_95	1237149.C900_04865	1.441e-78	268.0	28H5J@1|root,2Z7I5@2|Bacteria,4NHK6@976|Bacteroidetes,47PZX@768503|Cytophagia	976|Bacteroidetes	S	Domain of unknown function (DUF4290)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4290
BYD3_k127_1494367_27	1237149.C900_04866	2.197e-226	706.0	COG0766@1|root,COG0766@2|Bacteria,4NDV8@976|Bacteroidetes,47JQ7@768503|Cytophagia	976|Bacteroidetes	M	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine	murA	-	2.5.1.7	ko:K00790	ko00520,ko00550,ko01100,map00520,map00550,map01100	-	R00660	RC00350	ko00000,ko00001,ko01000,ko01011	-	-	-	EPSP_synthase
BYD3_k127_1494367_70	153721.MYP_898	3.459e-111	364.0	COG0708@1|root,COG0708@2|Bacteria,4NEY3@976|Bacteroidetes,47THR@768503|Cytophagia	976|Bacteroidetes	L	Endonuclease/Exonuclease/phosphatase family	xth	-	3.1.11.2	ko:K01142	ko03410,map03410	-	-	-	ko00000,ko00001,ko01000,ko03400	-	-	-	Exo_endo_phos
BYD3_k127_1494367_44	153721.MYP_510	5.155e-166	533.0	COG0124@1|root,COG0124@2|Bacteria,4NE8N@976|Bacteroidetes,47KPD@768503|Cytophagia	976|Bacteroidetes	J	tRNA synthetase class II core domain (G, H, P, S and T)	hisS	-	6.1.1.21	ko:K01892	ko00970,map00970	M00359,M00360	R03655	RC00055,RC00523	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	-	-	-	HGTP_anticodon,tRNA-synt_His
BYD3_k127_1494367_28	1237149.C900_04377	5.681e-225	706.0	COG2986@1|root,COG2986@2|Bacteria,4NE0D@976|Bacteroidetes,47MP5@768503|Cytophagia	976|Bacteroidetes	E	Histidine ammonia-lyase	hutH	-	4.3.1.3	ko:K01745	ko00340,ko01100,map00340,map01100	M00045	R01168	RC00361	ko00000,ko00001,ko00002,ko01000	-	-	-	Lyase_aromatic
BYD3_k127_1494367_102	153721.MYP_509	1.907e-68	256.0	COG3291@1|root,COG3291@2|Bacteria,4NJW2@976|Bacteroidetes,47K98@768503|Cytophagia	976|Bacteroidetes	S	C-terminal domain of CHU protein family	-	-	-	-	-	-	-	-	-	-	-	-	CHU_C
BYD3_k127_1494367_130	1237149.C900_04380	1.091e-40	153.0	COG0718@1|root,COG0718@2|Bacteria,4NQ37@976|Bacteroidetes,47R3V@768503|Cytophagia	976|Bacteroidetes	S	Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection	-	-	-	ko:K09747	-	-	-	-	ko00000	-	-	-	YbaB_DNA_bd
BYD3_k127_1494367_69	1124780.ANNU01000023_gene3142	5.359e-114	377.0	COG1216@1|root,COG1216@2|Bacteria,4NFP0@976|Bacteroidetes,47K2G@768503|Cytophagia	976|Bacteroidetes	S	PFAM Glycosyl transferase family 2	-	-	-	ko:K07011	-	-	-	-	ko00000	-	-	-	Glycos_transf_2
BYD3_k127_1494367_144	1237149.C900_04382	4.236e-28	115.0	COG1983@1|root,COG1983@2|Bacteria,4NUNU@976|Bacteroidetes,47RWN@768503|Cytophagia	976|Bacteroidetes	KT	PFAM PspC domain	-	-	-	-	-	-	-	-	-	-	-	-	PspC
BYD3_k127_1494367_30	1237149.C900_04383	8.499e-222	702.0	COG0457@1|root,COG0457@2|Bacteria,4NIJG@976|Bacteroidetes,47KBE@768503|Cytophagia	976|Bacteroidetes	M	Tetratricopeptide repeat protein	-	-	-	-	-	-	-	-	-	-	-	-	OmpA,TPR_16,TPR_2,TPR_8
BYD3_k127_1494367_41	1185876.BN8_05826	1.64e-174	553.0	COG0022@1|root,COG0022@2|Bacteria,4NE4N@976|Bacteroidetes,47J9X@768503|Cytophagia	976|Bacteroidetes	C	Pyruvate 2-oxoglutarate dehydrogenase complex, dehydrogenase	pdhB	-	1.2.4.1	ko:K00162	ko00010,ko00020,ko00620,ko01100,ko01110,ko01120,ko01130,ko01200,ko04066,ko04922,ko05230,map00010,map00020,map00620,map01100,map01110,map01120,map01130,map01200,map04066,map04922,map05230	M00307	R00014,R00209,R01699,R03270	RC00004,RC00027,RC00627,RC02742,RC02744,RC02882	br01601,ko00000,ko00001,ko00002,ko01000	-	-	-	Transket_pyr,Transketolase_C
BYD3_k127_1494367_149	471854.Dfer_0553	1.054e-16	87.0	2AT94@1|root,31IS1@2|Bacteria,4NR1S@976|Bacteroidetes,47QPI@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_1494367_55	1124780.ANNU01000005_gene2515	3.662e-139	456.0	COG0144@1|root,COG3270@1|root,COG0144@2|Bacteria,COG3270@2|Bacteria,4NEV7@976|Bacteroidetes,47KID@768503|Cytophagia	976|Bacteroidetes	J	RNA-binding PUA-like domain of methyltransferase RsmF	rsmF	-	-	-	-	-	-	-	-	-	-	-	Methyltr_RsmB-F,Methyltr_RsmF_N,Methyltranf_PUA
BYD3_k127_1494367_2	1237149.C900_02176	0.0	1295.0	COG0525@1|root,COG0525@2|Bacteria,4NETB@976|Bacteroidetes,47JHX@768503|Cytophagia	976|Bacteroidetes	J	amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner	valS	GO:0003674,GO:0003824,GO:0004812,GO:0004832,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006438,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576	6.1.1.9	ko:K01873	ko00970,map00970	M00359,M00360	R03665	RC00055,RC00523	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	-	-	-	Anticodon_1,Val_tRNA-synt_C,tRNA-synt_1
BYD3_k127_1494367_126	388413.ALPR1_11620	3.328e-47	178.0	2DM01@1|root,312CM@2|Bacteria,4NQ0N@976|Bacteroidetes,47PY4@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	CarbopepD_reg_2
BYD3_k127_1494367_35	1237149.C900_02179	3.655e-208	652.0	COG0686@1|root,COG0686@2|Bacteria,4NE8F@976|Bacteroidetes,47J94@768503|Cytophagia	976|Bacteroidetes	E	PFAM Alanine dehydrogenase PNT, C-terminal domain	ald	-	1.4.1.1	ko:K00259	ko00250,ko00430,ko01100,map00250,map00430,map01100	-	R00396	RC00008	ko00000,ko00001,ko01000	-	-	-	AlaDh_PNT_C,AlaDh_PNT_N
BYD3_k127_1494367_134	714943.Mucpa_2741	1.588e-39	153.0	COG0802@1|root,COG0802@2|Bacteria,4NS89@976|Bacteroidetes,1ISTA@117747|Sphingobacteriia	976|Bacteroidetes	S	PFAM Uncharacterised protein family UPF0079, ATPase	yjeE	-	-	ko:K06925	-	-	-	-	ko00000,ko03016	-	-	-	TsaE
BYD3_k127_1494367_20	1237149.C900_02181	7.228e-266	826.0	COG2204@1|root,COG2204@2|Bacteria,4NE72@976|Bacteroidetes,47KVF@768503|Cytophagia	976|Bacteroidetes	T	CheY-like receiver AAA-type ATPase and DNA-binding domains	porX	-	-	-	-	-	-	-	-	-	-	-	PglZ,Response_reg
BYD3_k127_1494367_46	153721.MYP_3793	2.54e-163	523.0	COG1078@1|root,COG1078@2|Bacteria,4NE1T@976|Bacteroidetes,47JI5@768503|Cytophagia	976|Bacteroidetes	S	SMART Metal-dependent phosphohydrolase, HD region	-	-	-	ko:K06885	-	-	-	-	ko00000	-	-	-	HD
BYD3_k127_1494367_49	1237149.C900_02183	5.74e-154	493.0	COG1044@1|root,COG1044@2|Bacteria,4NE5G@976|Bacteroidetes,47J9Z@768503|Cytophagia	976|Bacteroidetes	M	Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell	lpxD	-	2.3.1.191	ko:K02536	ko00540,ko01100,map00540,map01100	M00060	R04550	RC00039,RC00166	ko00000,ko00001,ko00002,ko01000,ko01005	-	-	-	Hexapep,Hexapep_2,LpxD
BYD3_k127_1494367_22	1237149.C900_02184	2.749e-260	806.0	COG0764@1|root,COG0774@1|root,COG0764@2|Bacteria,COG0774@2|Bacteria,4NEJ3@976|Bacteroidetes,47JFB@768503|Cytophagia	976|Bacteroidetes	IM	Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis	fabZ	-	3.5.1.108,4.2.1.59	ko:K16363	ko00061,ko00540,ko01100,ko01212,map00061,map00540,map01100,map01212	M00060,M00083	R04428,R04535,R04537,R04544,R04568,R04587,R04954,R04965	RC00166,RC00300,RC00831,RC01095	ko00000,ko00001,ko00002,ko01000,ko01004,ko01005	-	-	-	FabA,LpxC
BYD3_k127_1494367_62	1237149.C900_02185	8.187e-130	420.0	COG1043@1|root,COG1043@2|Bacteria,4NEBA@976|Bacteroidetes,47JJC@768503|Cytophagia	976|Bacteroidetes	M	Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell	lpxA	-	2.3.1.129	ko:K00677	ko00540,ko01100,ko01503,map00540,map01100,map01503	M00060	R04567	RC00039,RC00055	ko00000,ko00001,ko00002,ko01000,ko01005	-	-	-	Acetyltransf_11,Hexapep
BYD3_k127_1494367_113	929562.Emtol_2974	2.21e-59	212.0	COG1131@1|root,COG1131@2|Bacteria,4NN9G@976|Bacteroidetes,47PDC@768503|Cytophagia	976|Bacteroidetes	V	PFAM ABC transporter	-	-	3.6.3.41	ko:K02193	ko02010,map02010	M00259	-	-	ko00000,ko00001,ko00002,ko01000,ko02000	3.A.1.107	-	-	ABC_tran
BYD3_k127_1494367_25	1237149.C900_02189	1.03e-229	735.0	COG1193@1|root,COG1193@2|Bacteria,4NFE6@976|Bacteroidetes,47KJ6@768503|Cytophagia	976|Bacteroidetes	L	Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity	mutS2	-	-	ko:K07456	ko03430,map03430	-	-	-	ko00000,ko00001,ko03400	-	-	-	MutS_V,Smr
BYD3_k127_1494367_150	153721.MYP_528	1.438e-13	76.0	2EK3P@1|root,33DU3@2|Bacteria,4NXK2@976|Bacteroidetes,47SN3@768503|Cytophagia	976|Bacteroidetes	S	Domain of unknown function (DUF4296)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4296
BYD3_k127_1494367_57	1237149.C900_02191	6.07e-137	441.0	COG1721@1|root,COG1721@2|Bacteria,4NE2N@976|Bacteroidetes,47JXB@768503|Cytophagia	976|Bacteroidetes	S	protein (some members contain a von Willebrand factor type A (vWA) domain)	-	-	-	-	-	-	-	-	-	-	-	-	DUF58
BYD3_k127_1494367_111	1237149.C900_02192	7.803e-60	218.0	2BPYJ@1|root,32ISF@2|Bacteria,4NRVJ@976|Bacteroidetes,47QN3@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_1494367_50	1237149.C900_02193	3.355e-153	490.0	COG2304@1|root,COG2304@2|Bacteria,4NDUC@976|Bacteroidetes,47JUP@768503|Cytophagia	976|Bacteroidetes	S	PFAM von Willebrand factor type A	batA	-	-	ko:K07114	-	-	-	-	ko00000,ko02000	1.A.13.2.2,1.A.13.2.3	-	-	VWA
BYD3_k127_1494367_128	1237149.C900_02194	2.724e-45	171.0	COG1280@1|root,COG1280@2|Bacteria,4NH3F@976|Bacteroidetes,47NRD@768503|Cytophagia	976|Bacteroidetes	E	PFAM Lysine exporter protein (LYSE YGGA)	-	-	-	-	-	-	-	-	-	-	-	-	LysE
BYD3_k127_1494367_18	1237149.C900_02195	1.01e-267	831.0	COG0318@1|root,COG0318@2|Bacteria,4PKQG@976|Bacteroidetes,47K42@768503|Cytophagia	976|Bacteroidetes	IQ	GH3 auxin-responsive promoter	-	-	-	-	-	-	-	-	-	-	-	-	GH3
BYD3_k127_1494367_88	1237149.C900_02196	1.599e-84	285.0	COG0325@1|root,COG0325@2|Bacteria,4NE42@976|Bacteroidetes,47M4Y@768503|Cytophagia	976|Bacteroidetes	S	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis	yggS	-	-	ko:K06997	-	-	-	-	ko00000	-	-	-	Ala_racemase_N
BYD3_k127_1494367_136	643867.Ftrac_1200	5.802e-37	143.0	COG2363@1|root,COG2363@2|Bacteria,4NS8F@976|Bacteroidetes,47RJW@768503|Cytophagia	976|Bacteroidetes	S	small membrane protein	-	-	-	-	-	-	-	-	-	-	-	-	DUF423
BYD3_k127_1494367_132	1237149.C900_02200	3.229e-40	153.0	COG2885@1|root,COG2885@2|Bacteria,4NRQ3@976|Bacteroidetes,47S5T@768503|Cytophagia	976|Bacteroidetes	M	Protein of unknown function (DUF1573)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1573
BYD3_k127_1494367_137	1121904.ARBP01000003_gene6183	7.778e-37	143.0	COG1051@1|root,COG1051@2|Bacteria,4NN73@976|Bacteroidetes,47P7Y@768503|Cytophagia	976|Bacteroidetes	F	Nudix hydrolase	-	-	3.6.1.55	ko:K03574	-	-	-	-	ko00000,ko01000,ko03400	-	-	-	NUDIX
BYD3_k127_1494367_103	1237149.C900_02204	3.689e-68	241.0	2C0G9@1|root,310GM@2|Bacteria,4NHU0@976|Bacteroidetes,47NP8@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_1494367_72	1237149.C900_02205	1.319e-107	355.0	29SSC@1|root,30DYA@2|Bacteria,4NM51@976|Bacteroidetes,47PSA@768503|Cytophagia	976|Bacteroidetes	S	Protein of unknown function (DUF3822)	-	-	-	-	-	-	-	-	-	-	-	-	DUF3822
BYD3_k127_1494367_104	1237149.C900_02206	1.322e-67	233.0	COG0669@1|root,COG0669@2|Bacteria,4NM84@976|Bacteroidetes,47PE3@768503|Cytophagia	976|Bacteroidetes	H	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate	coaD	-	2.7.7.3	ko:K00954	ko00770,ko01100,map00770,map01100	M00120	R03035	RC00002	ko00000,ko00001,ko00002,ko01000	-	-	-	CTP_transf_like
BYD3_k127_1494367_98	1237149.C900_02207	1.647e-74	257.0	COG1051@1|root,COG1051@2|Bacteria,4NS9I@976|Bacteroidetes,47NQ9@768503|Cytophagia	976|Bacteroidetes	F	NUDIX domain	-	-	-	-	-	-	-	-	-	-	-	-	NUDIX
BYD3_k127_1494367_93	1237149.C900_02208	1.838e-81	278.0	COG0461@1|root,COG0461@2|Bacteria,4NEF8@976|Bacteroidetes,47JX7@768503|Cytophagia	976|Bacteroidetes	F	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)	pyrE	-	2.4.2.10,4.1.1.23	ko:K00762,ko:K13421	ko00240,ko00983,ko01100,map00240,map00983,map01100	M00051	R00965,R01870,R08231	RC00063,RC00409,RC00611	ko00000,ko00001,ko00002,ko01000	-	-	-	OMPdecase,Pribosyltran
BYD3_k127_1494367_110	929703.KE386491_gene2461	3.231e-60	213.0	COG1648@1|root,COG1648@2|Bacteria,4NI81@976|Bacteroidetes,47PPT@768503|Cytophagia	976|Bacteroidetes	H	Siroheme synthase	cysG	-	1.3.1.76,4.99.1.4	ko:K02304,ko:K07090	ko00860,ko01100,ko01110,ko01120,map00860,map01100,map01110,map01120	M00121	R02864,R03947	RC01012,RC01034	ko00000,ko00001,ko00002,ko01000	-	-	-	NAD_binding_7,Sirohm_synth_M,TauE
BYD3_k127_1494367_86	504472.Slin_2052	2.292e-86	293.0	COG0007@1|root,COG0007@2|Bacteria,4NFVR@976|Bacteroidetes,47JQG@768503|Cytophagia	976|Bacteroidetes	H	TIGRFAM Uroporphyrin-III C-methyltransferase	-	-	2.1.1.107,4.2.1.75	ko:K02303,ko:K13542	ko00860,ko01100,ko01110,ko01120,map00860,map01100,map01110,map01120	M00121	R03165,R03194	RC00003,RC00871,RC01861	ko00000,ko00001,ko00002,ko01000	-	-	-	HEM4,TP_methylase
BYD3_k127_1494367_16	313606.M23134_04900	8.563e-280	876.0	COG0155@1|root,COG0155@2|Bacteria,4NENW@976|Bacteroidetes,47MYH@768503|Cytophagia	976|Bacteroidetes	C	Nitrite and sulphite reductase 4Fe-4S	sir	-	1.8.1.2,1.8.7.1	ko:K00381,ko:K00392	ko00920,ko01100,ko01120,map00920,map01100,map01120	M00176	R00858,R00859,R03600	RC00065	ko00000,ko00001,ko00002,ko01000	-	-	-	HEPN,NIR_SIR,NIR_SIR_ferr
BYD3_k127_1494367_106	1313301.AUGC01000001_gene1771	9.516e-65	226.0	2CC29@1|root,32RUM@2|Bacteria,4NS83@976|Bacteroidetes	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	LPP20
BYD3_k127_1494367_100	880073.Calab_3759	1.457e-71	259.0	2DMDZ@1|root,32QUA@2|Bacteria,2NRD6@2323|unclassified Bacteria	2|Bacteria	S	LPP20 lipoprotein	-	-	-	-	-	-	-	-	-	-	-	-	LPP20
BYD3_k127_1494367_59	1123057.P872_19260	9.717e-136	435.0	COG0479@1|root,COG0479@2|Bacteria,4NFR3@976|Bacteroidetes,47KHR@768503|Cytophagia	976|Bacteroidetes	C	TIGRFAM succinate dehydrogenase and fumarate reductase iron-sulfur protein	frdB	-	1.3.5.1,1.3.5.4	ko:K00240	ko00020,ko00190,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00190,map00650,map00720,map01100,map01110,map01120,map01130,map01200	M00009,M00011,M00149,M00173,M00374,M00376	R02164	RC00045	ko00000,ko00001,ko00002,ko01000	-	-	-	Fer2_3,Fer4_7,Fer4_8
BYD3_k127_1494367_9	1123277.KB893184_gene4231	0.0	1073.0	COG1053@1|root,COG1053@2|Bacteria,4NFDU@976|Bacteroidetes,47JE5@768503|Cytophagia	976|Bacteroidetes	C	TIGRFAM succinate dehydrogenase or fumarate reductase, flavoprotein subunit	sdhA	-	1.3.5.1,1.3.5.4	ko:K00239	ko00020,ko00190,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko05134,map00020,map00190,map00650,map00720,map01100,map01110,map01120,map01130,map01200,map05134	M00009,M00011,M00149,M00173,M00374,M00376	R02164	RC00045	ko00000,ko00001,ko00002,ko01000	-	-	-	FAD_binding_2,Succ_DH_flav_C
BYD3_k127_1494367_90	1237149.C900_04401	6.383e-83	280.0	2CAZH@1|root,2Z7RU@2|Bacteria,4NGM5@976|Bacteroidetes,47NEV@768503|Cytophagia	976|Bacteroidetes	S	TIGRFAM succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family	sdhC	-	-	ko:K00241	ko00020,ko00190,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00190,map00650,map00720,map01100,map01110,map01120,map01130,map01200	M00009,M00011,M00149,M00173,M00374,M00376	R02164	RC00045	ko00000,ko00001,ko00002	-	-	-	-
BYD3_k127_1494367_0	643867.Ftrac_3357	0.0	1693.0	COG0587@1|root,COG0587@2|Bacteria,4NFA0@976|Bacteroidetes,47K9H@768503|Cytophagia	976|Bacteroidetes	L	DNA-directed DNA polymerase	dnaE	-	2.7.7.7	ko:K02337	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	M00260	R00375,R00376,R00377,R00378	RC02795	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	-	-	-	DNA_pol3_alpha,HHH_6,PHP,RNase_T,tRNA_anti-codon
BYD3_k127_1494367_118	1237149.C900_03646	3.605e-55	195.0	COG3118@1|root,COG3118@2|Bacteria,4NQ5B@976|Bacteroidetes,47QDT@768503|Cytophagia	976|Bacteroidetes	O	Belongs to the thioredoxin family	trxA	-	-	ko:K03671	ko04621,ko05418,map04621,map05418	-	-	-	ko00000,ko00001,ko03110	-	-	-	Thioredoxin
BYD3_k127_1494367_45	153721.MYP_3815	6.249e-165	530.0	COG1649@1|root,COG1649@2|Bacteria,4NJ45@976|Bacteroidetes,47JSI@768503|Cytophagia	976|Bacteroidetes	S	Carbohydrate esterase, sialic acid-specific acetylesterase	-	-	3.1.1.53	ko:K05970	-	-	-	-	ko00000,ko01000	-	-	-	SASA
BYD3_k127_1494367_108	929556.Solca_2612	4.009e-62	217.0	COG0727@1|root,COG0727@2|Bacteria,4NJH9@976|Bacteroidetes,1ITJ5@117747|Sphingobacteriia	976|Bacteroidetes	S	Putative zinc- or iron-chelating domain	-	-	-	ko:K06940	-	-	-	-	ko00000	-	-	-	CxxCxxCC
BYD3_k127_1494367_74	1185876.BN8_02974	2.864e-99	333.0	COG2378@1|root,COG2378@2|Bacteria,4NHIC@976|Bacteroidetes,47K9W@768503|Cytophagia	976|Bacteroidetes	K	transcriptional regulator	-	-	-	-	-	-	-	-	-	-	-	-	HTH_11,WYL
BYD3_k127_1494367_21	938709.AUSH02000045_gene482	6.089e-264	822.0	COG4146@1|root,COG4146@2|Bacteria,4NE9S@976|Bacteroidetes	976|Bacteroidetes	S	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family	-	-	-	ko:K03307	-	-	-	-	ko00000	2.A.21	-	-	SSF
BYD3_k127_1494367_61	1408813.AYMG01000006_gene4141	3.112e-134	430.0	COG0647@1|root,COG0647@2|Bacteria,4NG49@976|Bacteroidetes,1IRQX@117747|Sphingobacteriia	976|Bacteroidetes	G	Haloacid Dehalogenase Superfamily Class (subfamily) IIA	-	-	-	ko:K02566	-	-	-	-	ko00000	-	-	-	Hydrolase_6,Hydrolase_like
BYD3_k127_1494367_51	1123057.P872_23425	8.975e-152	484.0	COG3622@1|root,COG3622@2|Bacteria,4NG0V@976|Bacteroidetes,47M10@768503|Cytophagia	976|Bacteroidetes	G	Belongs to the hyi family	-	-	5.3.1.22	ko:K01816	ko00630,ko01100,map00630,map01100	-	R01394	RC00511	ko00000,ko00001,ko01000	-	-	-	AP_endonuc_2
BYD3_k127_1494367_5	1392488.JHZY01000002_gene579	0.0	1247.0	COG4888@1|root,COG4888@2|Bacteria,4NEE8@976|Bacteroidetes,1HX4C@117743|Flavobacteriia,2XJ0R@283735|Leeuwenhoekiella	976|Bacteroidetes	S	ASPIC and UnbV	-	-	-	-	-	-	-	-	-	-	-	-	UnbV_ASPIC,VCBS
BYD3_k127_1494367_4	1189612.A33Q_3407	0.0	1252.0	COG4888@1|root,COG4888@2|Bacteria,4NEE8@976|Bacteroidetes,47JJ5@768503|Cytophagia	976|Bacteroidetes	S	ASPIC and UnbV	-	-	-	-	-	-	-	-	-	-	-	-	UnbV_ASPIC,VCBS
BYD3_k127_1494367_34	1123248.KB893348_gene178	8.286e-211	670.0	COG1435@1|root,COG1435@2|Bacteria,4NE0A@976|Bacteroidetes,1IQAB@117747|Sphingobacteriia	976|Bacteroidetes	F	PFAM RagB SusD	-	-	-	ko:K21572	-	-	-	-	ko00000,ko02000	8.A.46.1,8.A.46.3	-	-	SusD-like_3,SusD_RagB
BYD3_k127_1494367_12	1121904.ARBP01000029_gene2144	0.0	1044.0	COG1629@1|root,COG1629@2|Bacteria,4NDXS@976|Bacteroidetes,47JJJ@768503|Cytophagia	976|Bacteroidetes	P	TonB-dependent Receptor Plug	-	-	-	-	-	-	-	-	-	-	-	-	CarbopepD_reg_2,Plug,TonB_dep_Rec
BYD3_k127_1494367_117	1123277.KB893176_gene3718	1.271e-55	207.0	COG3712@1|root,COG3712@2|Bacteria,4NSEH@976|Bacteroidetes,47RNC@768503|Cytophagia	976|Bacteroidetes	PT	Domain of unknown function (DUF4974)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4974,FecR
BYD3_k127_1494367_135	762903.Pedsa_2663	2.605e-39	153.0	COG1595@1|root,COG1595@2|Bacteria,4NSXH@976|Bacteroidetes,1ITNT@117747|Sphingobacteriia	976|Bacteroidetes	K	RNA polymerase, sigma-24 subunit, ECF subfamily	-	-	-	ko:K03088	-	-	-	-	ko00000,ko03021	-	-	-	Sigma70_r2,Sigma70_r4_2
BYD3_k127_1494367_119	925409.KI911562_gene2640	4.838e-53	190.0	COG1764@1|root,COG1764@2|Bacteria,4NQKB@976|Bacteroidetes,1IT1Y@117747|Sphingobacteriia	976|Bacteroidetes	O	TIGRFAM Peroxiredoxin, osmotically inducible protein C, subgroup	-	-	-	ko:K04063	-	-	-	-	ko00000	-	-	-	OsmC
BYD3_k127_1494367_19	485918.Cpin_2573	5.775e-267	848.0	COG3280@1|root,COG3280@2|Bacteria,4PM29@976|Bacteroidetes,1J0MJ@117747|Sphingobacteriia	976|Bacteroidetes	G	Alpha amylase, catalytic domain	-	-	5.4.99.15	ko:K06044	ko00500,ko01100,ko01110,map00500,map01100,map01110	M00565	R01824,R09995	-	ko00000,ko00001,ko00002,ko01000	-	GH13	-	Alpha-amylase
BYD3_k127_1494367_23	485918.Cpin_2574	1.559e-233	737.0	COG0296@1|root,COG0296@2|Bacteria,4PKT8@976|Bacteroidetes,1IQBN@117747|Sphingobacteriia	976|Bacteroidetes	G	SMART Glycosyl hydrolase, family 13, subfamily, catalytic	-	-	3.2.1.141	ko:K01236	ko00500,ko01100,ko01110,map00500,map01100,map01110	M00565	R09995,R11256	RC00049	ko00000,ko00001,ko00002,ko01000	-	CBM48,GH13	-	Alpha-amylase,CBM_48,DUF3459
BYD3_k127_1494367_6	485918.Cpin_2576	0.0	1198.0	COG1523@1|root,COG1523@2|Bacteria,4NIH2@976|Bacteroidetes,1IR47@117747|Sphingobacteriia	976|Bacteroidetes	G	glycogen debranching enzyme GlgX	glgX	-	3.2.1.68	ko:K01214	ko00500,ko01100,ko01110,map00500,map01100,map01110	M00565	R09995,R11261	-	ko00000,ko00001,ko00002,ko01000	-	CBM48,GH13	-	Alpha-amylase,CBM_48
BYD3_k127_1494367_11	1150600.ADIARSV_0832	0.0	1052.0	COG0642@1|root,COG3292@1|root,COG0642@2|Bacteria,COG2205@2|Bacteria,COG3292@2|Bacteria,4NDXU@976|Bacteroidetes,1IRJZ@117747|Sphingobacteriia	976|Bacteroidetes	T	His Kinase A (phosphoacceptor) domain	-	-	-	-	-	-	-	-	-	-	-	-	GAF,HATPase_c,HisKA,PAS_4,PAS_9,Reg_prop,Response_reg,Y_Y_Y
BYD3_k127_1494367_66	485917.Phep_4102	1.006e-119	399.0	COG2234@1|root,COG2234@2|Bacteria,4NGPJ@976|Bacteroidetes,1IWJR@117747|Sphingobacteriia	976|Bacteroidetes	S	Peptidase family M28	-	-	-	-	-	-	-	-	-	-	-	-	Peptidase_M28
BYD3_k127_1494367_109	1185876.BN8_01934	9.873e-62	216.0	COG2318@1|root,COG2318@2|Bacteria,4NNQA@976|Bacteroidetes,47Q00@768503|Cytophagia	976|Bacteroidetes	S	DinB superfamily	-	-	-	-	-	-	-	-	-	-	-	-	DinB_2
BYD3_k127_1494367_54	1123248.KB893317_gene4359	3.323e-142	464.0	COG2333@1|root,COG2333@2|Bacteria,4NH12@976|Bacteroidetes,1ISHP@117747|Sphingobacteriia	976|Bacteroidetes	S	competence protein COMEC	-	-	-	-	-	-	-	-	-	-	-	-	Lactamase_B
BYD3_k127_1494367_140	1089547.KB913013_gene1564	1.975e-29	134.0	COG3266@1|root,COG3266@2|Bacteria,4NKN6@976|Bacteroidetes,47NWQ@768503|Cytophagia	976|Bacteroidetes	S	domain, Protein	-	-	-	-	-	-	-	-	-	-	-	-	OMP_b-brl,OMP_b-brl_2
BYD3_k127_1494367_121	471854.Dfer_4134	2.498e-51	188.0	COG1595@1|root,COG1595@2|Bacteria,4NKHT@976|Bacteroidetes,47P68@768503|Cytophagia	976|Bacteroidetes	K	TIGRFAM RNA polymerase sigma factor, sigma-70 family	-	-	-	ko:K03088	-	-	-	-	ko00000,ko03021	-	-	-	Sigma70_r2,Sigma70_r4_2
BYD3_k127_1494367_155	365528.KB891103_gene4058	0.0001288	50.0	COG0745@1|root,COG0745@2|Bacteria,2GIZB@201174|Actinobacteria,4ERG0@85013|Frankiales	201174|Actinobacteria	T	Two component transcriptional regulator, winged helix family	-	-	-	ko:K02483	-	-	-	-	ko00000,ko02022	-	-	-	Response_reg,Trans_reg_C
BYD3_k127_1494367_139	313606.M23134_04425	1.005e-29	139.0	COG0840@1|root,COG2202@1|root,COG2203@1|root,COG5000@1|root,COG0840@2|Bacteria,COG2202@2|Bacteria,COG2203@2|Bacteria,COG5000@2|Bacteria,4NICW@976|Bacteroidetes,47KTQ@768503|Cytophagia	976|Bacteroidetes	T	Domain present in phytochromes and cGMP-specific phosphodiesterases.	-	-	-	ko:K03406	ko02020,ko02030,map02020,map02030	-	-	-	ko00000,ko00001,ko02035	-	-	-	GAF_2,PAS_3,PAS_4,PAS_9
BYD3_k127_1494367_29	1237149.C900_04279	5.992e-222	729.0	COG3292@1|root,COG4251@1|root,COG3292@2|Bacteria,COG4251@2|Bacteria,4NK8Q@976|Bacteroidetes,47KVN@768503|Cytophagia	976|Bacteroidetes	T	Two component regulator propeller	-	-	-	-	-	-	-	-	-	-	-	-	GAF_2,HATPase_c,HisKA,Reg_prop,Y_Y_Y
BYD3_k127_1494367_36	1185876.BN8_05813	2.217e-202	641.0	COG1696@1|root,COG1696@2|Bacteria,4NFK5@976|Bacteroidetes,47ME9@768503|Cytophagia	976|Bacteroidetes	M	membrane protein involved in D-alanine export	-	-	-	-	-	-	-	-	-	-	-	-	MBOAT
BYD3_k127_1494367_89	1185876.BN8_05812	3.922e-83	288.0	2BSEF@1|root,32MGE@2|Bacteria,4NK41@976|Bacteroidetes,47USI@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_1494367_76	1185876.BN8_05812	2.572e-92	314.0	2BSEF@1|root,32MGE@2|Bacteria,4NK41@976|Bacteroidetes,47USI@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_1494367_122	1121904.ARBP01000010_gene2314	4.288e-51	188.0	COG0457@1|root,COG0457@2|Bacteria,4PN8J@976|Bacteroidetes,47YES@768503|Cytophagia	976|Bacteroidetes	S	Protein of unknown function (DUF2911)	-	-	-	-	-	-	-	-	-	-	-	-	DUF2911
BYD3_k127_1494367_120	761193.Runsl_0300	2.335e-52	189.0	COG2329@1|root,COG2329@2|Bacteria,4NQGS@976|Bacteroidetes,47QSH@768503|Cytophagia	976|Bacteroidetes	S	Domain of unknown function (DUF3291)	-	-	-	-	-	-	-	-	-	-	-	-	DUF3291
BYD3_k127_1494367_127	485918.Cpin_2027	7.13e-47	174.0	COG1959@1|root,COG1959@2|Bacteria,4NNN2@976|Bacteroidetes,1ISUE@117747|Sphingobacteriia	976|Bacteroidetes	K	transcriptional regulator	cymR	-	-	-	-	-	-	-	-	-	-	-	Rrf2
BYD3_k127_1494367_63	471854.Dfer_0286	1.504e-128	419.0	COG1082@1|root,COG1082@2|Bacteria,4NFQY@976|Bacteroidetes,47KP7@768503|Cytophagia	976|Bacteroidetes	G	Xylose isomerase domain protein TIM barrel	-	-	-	-	-	-	-	-	-	-	-	-	AP_endonuc_2
BYD3_k127_1494367_75	504472.Slin_3382	1.056e-96	320.0	COG0702@1|root,COG0702@2|Bacteria,4NGMR@976|Bacteroidetes,47NYS@768503|Cytophagia	976|Bacteroidetes	GM	epimerase	-	-	-	-	-	-	-	-	-	-	-	-	Epimerase
BYD3_k127_1494367_64	411154.GFO_1709	1.416e-126	413.0	COG1063@1|root,COG1063@2|Bacteria,4NHCK@976|Bacteroidetes,1IIK7@117743|Flavobacteriia	976|Bacteroidetes	E	alcohol dehydrogenase	-	-	-	-	-	-	-	-	-	-	-	-	ADH_N,ADH_zinc_N
BYD3_k127_1494367_71	1150600.ADIARSV_4130	2.178e-108	363.0	COG2706@1|root,COG2706@2|Bacteria,4NE87@976|Bacteroidetes,1INQI@117747|Sphingobacteriia	976|Bacteroidetes	G	3-carboxymuconate cyclase	-	-	3.1.1.31	ko:K07404	ko00030,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map01100,map01110,map01120,map01130,map01200	M00004,M00006,M00008	R02035	RC00537	ko00000,ko00001,ko00002,ko01000	-	-	-	Lactonase
BYD3_k127_1494367_31	1237149.C900_00839	9.686e-220	708.0	COG0577@1|root,COG0577@2|Bacteria,4NDUK@976|Bacteroidetes,47JJN@768503|Cytophagia	976|Bacteroidetes	V	FtsX-like permease family	-	-	-	-	-	-	-	-	-	-	-	-	FtsX,MacB_PCD
BYD3_k127_1494367_65	1185876.BN8_05302	3.275e-122	408.0	COG3934@1|root,COG3934@2|Bacteria,4NG6S@976|Bacteroidetes	976|Bacteroidetes	G	Belongs to the glycosyl hydrolase 5 (cellulase A) family	-	-	-	-	-	-	-	-	-	-	-	-	Cellulase
BYD3_k127_1494367_146	246197.MXAN_5877	2.799e-24	114.0	COG2353@1|root,COG2353@2|Bacteria,1R9XD@1224|Proteobacteria,42T4I@68525|delta/epsilon subdivisions,2X5P2@28221|Deltaproteobacteria,2Z36K@29|Myxococcales	28221|Deltaproteobacteria	S	YceI-like domain	-	-	-	-	-	-	-	-	-	-	-	-	YceI
BYD3_k127_1512070_4	1288963.ADIS_3903	1.526e-177	565.0	COG0405@1|root,COG0405@2|Bacteria,4NF2H@976|Bacteroidetes,47K06@768503|Cytophagia	976|Bacteroidetes	E	Gamma-glutamyltranspeptidase	-	-	2.3.2.2,3.4.19.13	ko:K00681	ko00430,ko00460,ko00480,ko01100,map00430,map00460,map00480,map01100	-	R00494,R01262,R01687,R03867,R03916,R03970,R03971,R04935	RC00064,RC00090,RC00096	ko00000,ko00001,ko01000,ko01002	-	-	-	G_glu_transpept
BYD3_k127_1512070_1	643867.Ftrac_0960	2.494e-201	640.0	COG0006@1|root,COG0006@2|Bacteria,4NI0S@976|Bacteroidetes,47MY8@768503|Cytophagia	976|Bacteroidetes	E	Belongs to the peptidase M24B family	-	-	3.4.11.9	ko:K01262	-	-	-	-	ko00000,ko01000,ko01002	-	-	-	AMP_N,Peptidase_M24
BYD3_k127_1512070_8	1121481.AUAS01000017_gene2494	2.547e-141	478.0	COG0577@1|root,COG0577@2|Bacteria,4NDUK@976|Bacteroidetes,47MUE@768503|Cytophagia	976|Bacteroidetes	V	MacB-like periplasmic core domain	-	-	-	ko:K02004	-	M00258	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	FtsX,MacB_PCD
BYD3_k127_1512070_15	760192.Halhy_4848	5.425e-18	85.0	2CCSR@1|root,32RWC@2|Bacteria,4NSDM@976|Bacteroidetes,1ITTY@117747|Sphingobacteriia	976|Bacteroidetes	S	23S rRNA-intervening sequence protein	-	-	-	-	-	-	-	-	-	-	-	-	23S_rRNA_IVP
BYD3_k127_1512070_16	1216932.CM240_2141	1.111e-07	55.0	2CCSR@1|root,32RWC@2|Bacteria,1VHG8@1239|Firmicutes,24N36@186801|Clostridia,36K2K@31979|Clostridiaceae	186801|Clostridia	S	23S rRNA-intervening sequence protein	-	-	-	-	-	-	-	-	-	-	-	-	23S_rRNA_IVP
BYD3_k127_1512070_12	471854.Dfer_1411	2.447e-75	261.0	COG3836@1|root,COG3836@2|Bacteria,4NH2V@976|Bacteroidetes,47JVN@768503|Cytophagia	976|Bacteroidetes	G	Belongs to the HpcH HpaI aldolase family	-	-	4.1.2.20,4.1.2.52,4.1.2.53	ko:K01630,ko:K02510,ko:K12660	ko00051,ko00053,ko00350,ko01120,map00051,map00053,map00350,map01120	-	R01645,R01647,R02261,R02754,R03277	RC00307,RC00435,RC00572,RC00574,RC03057	ko00000,ko00001,ko01000	-	-	-	HpcH_HpaI
BYD3_k127_1512070_6	234267.Acid_7728	2.728e-144	469.0	COG4948@1|root,COG4948@2|Bacteria	2|Bacteria	M	carboxylic acid catabolic process	-	-	-	-	-	-	-	-	-	-	-	-	MR_MLE_C,MR_MLE_N
BYD3_k127_1512070_3	1340493.JNIF01000004_gene416	2.472e-181	577.0	COG4948@1|root,COG4948@2|Bacteria	2|Bacteria	M	carboxylic acid catabolic process	gudD	-	4.2.1.40	ko:K01706	ko00053,ko01100,map00053,map01100	-	R02752,R08056	RC00543	ko00000,ko00001,ko01000	-	-	-	MR_MLE_C,MR_MLE_N
BYD3_k127_1512070_9	926549.KI421517_gene1820	2.601e-134	442.0	COG2610@1|root,COG2610@2|Bacteria,4NJ5B@976|Bacteroidetes,47K2S@768503|Cytophagia	976|Bacteroidetes	EG	PFAM Gluconate transporter	-	-	-	ko:K03299	-	-	-	-	ko00000,ko02000	2.A.8	-	-	GntP_permease
BYD3_k127_1512070_2	1123248.KB893370_gene5050	2.892e-198	627.0	COG2010@1|root,COG2133@1|root,COG2010@2|Bacteria,COG2133@2|Bacteria,4NEZC@976|Bacteroidetes,1IPYV@117747|Sphingobacteriia	976|Bacteroidetes	G	Glucose / Sorbosone dehydrogenase	-	-	-	ko:K21430	-	-	-	-	ko00000,ko01000	-	-	-	Cytochrome_CBB3,GSDH
BYD3_k127_1512070_17	1120966.AUBU01000012_gene35	0.0002695	50.0	COG1629@1|root,COG4771@2|Bacteria,4PPHK@976|Bacteroidetes,47YNH@768503|Cytophagia	976|Bacteroidetes	P	TonB-dependent Receptor Plug Domain	-	-	-	-	-	-	-	-	-	-	-	-	Plug
BYD3_k127_1512070_10	700598.Niako_4625	4.793e-102	346.0	COG2114@1|root,COG2207@1|root,COG2114@2|Bacteria,COG2207@2|Bacteria,4NFVC@976|Bacteroidetes,1IXZX@117747|Sphingobacteriia	976|Bacteroidetes	K	Protein of unknown function (DUF4242)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4242,HTH_18
BYD3_k127_1512070_14	313603.FB2170_11691	7.727e-33	132.0	2C82G@1|root,32RK9@2|Bacteria,4NSXV@976|Bacteroidetes,1I466@117743|Flavobacteriia	976|Bacteroidetes	S	Protein of unknown function (DUF4242)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4242
BYD3_k127_1512070_11	1223410.KN050846_gene205	8.602e-83	285.0	2DCFR@1|root,2ZDYQ@2|Bacteria,4NPNX@976|Bacteroidetes,1I27F@117743|Flavobacteriia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	DUF4440
BYD3_k127_1512070_5	1229487.AMYW01000035_gene3151	1.941e-149	493.0	COG4805@1|root,COG4805@2|Bacteria,4NFAK@976|Bacteroidetes,1HXAT@117743|Flavobacteriia,2NUPC@237|Flavobacterium	976|Bacteroidetes	S	Bacterial protein of unknown function (DUF885)	-	-	-	-	-	-	-	-	-	-	-	-	DUF885
BYD3_k127_1512070_13	1237149.C900_03705	8.66e-53	199.0	2A8ZJ@1|root,30Y3E@2|Bacteria,4PBTM@976|Bacteroidetes,47WAZ@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_1512070_0	1123278.KB893390_gene830	8.668e-204	644.0	COG3119@1|root,COG3119@2|Bacteria,4NFRB@976|Bacteroidetes,47TC8@768503|Cytophagia	976|Bacteroidetes	P	C-terminal region of aryl-sulfatase	-	-	-	-	-	-	-	-	-	-	-	-	Sulfatase,Sulfatase_C
BYD3_k127_1512070_7	468059.AUHA01000003_gene1738	2.309e-141	459.0	COG0025@1|root,COG0025@2|Bacteria	2|Bacteria	P	sodium:proton antiporter activity	sod22	-	-	-	-	-	-	-	-	-	-	-	Na_H_Exchanger
BYD3_k127_1638923_0	929713.NIASO_09570	2.17e-205	644.0	COG0612@1|root,COG0612@2|Bacteria,4NEDZ@976|Bacteroidetes,1IPY5@117747|Sphingobacteriia	976|Bacteroidetes	S	PFAM Peptidase M16 inactive domain	-	-	-	ko:K07263	-	-	-	-	ko00000,ko01000,ko01002	-	-	-	Peptidase_M16,Peptidase_M16_C
BYD3_k127_1638923_1	1279009.ADICEAN_03090	3.218e-176	563.0	COG0612@1|root,COG0612@2|Bacteria,4NEPT@976|Bacteroidetes,47U45@768503|Cytophagia	976|Bacteroidetes	S	Insulinase (Peptidase family M16)	-	-	-	-	-	-	-	-	-	-	-	-	Peptidase_M16,Peptidase_M16_C
BYD3_k127_1638923_2	1500281.JQKZ01000046_gene2602	3.487e-05	47.0	COG0702@1|root,COG0702@2|Bacteria,4NGMK@976|Bacteroidetes,1I5T4@117743|Flavobacteriia,3ZQ2P@59732|Chryseobacterium	976|Bacteroidetes	GM	NAD-dependent dehydratase	-	-	-	-	-	-	-	-	-	-	-	-	NAD_binding_10,NmrA
BYD3_k127_1715624_4	1131812.JQMS01000001_gene2169	1.762e-77	263.0	COG1680@1|root,COG2976@1|root,COG1680@2|Bacteria,COG2976@2|Bacteria,4NI1Z@976|Bacteroidetes,1HYQF@117743|Flavobacteriia,2NT82@237|Flavobacterium	976|Bacteroidetes	V	beta-lactamase	-	-	-	-	-	-	-	-	-	-	-	-	Beta-lactamase,DUF3471,TPR_2,TPR_8
BYD3_k127_1715624_0	1121904.ARBP01000017_gene5165	8.874e-152	486.0	COG3292@1|root,COG3292@2|Bacteria,4NI2T@976|Bacteroidetes,47KG1@768503|Cytophagia	976|Bacteroidetes	T	PFAM Two component regulator propeller	-	-	-	-	-	-	-	-	-	-	-	-	Reg_prop,YceI
BYD3_k127_1715624_2	886377.Murru_1892	1.266e-112	376.0	COG2304@1|root,COG2304@2|Bacteria,4NEGD@976|Bacteroidetes,1HY72@117743|Flavobacteriia	976|Bacteroidetes	P	von Willebrand factor, type A	-	-	-	-	-	-	-	-	-	-	-	-	VWA
BYD3_k127_1715624_1	1121481.AUAS01000007_gene1213	1.138e-147	477.0	COG0745@1|root,COG0745@2|Bacteria,4NIKR@976|Bacteroidetes,47PEG@768503|Cytophagia	976|Bacteroidetes	KT	transcriptional regulator, winged helix family	-	-	-	-	-	-	-	-	-	-	-	-	Trans_reg_C
BYD3_k127_1715624_3	926549.KI421517_gene3206	1.541e-85	284.0	COG4948@1|root,COG4948@2|Bacteria,4NEPP@976|Bacteroidetes,47M8J@768503|Cytophagia	976|Bacteroidetes	M	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain	-	-	-	-	-	-	-	-	-	-	-	-	MR_MLE_C,MR_MLE_N
BYD3_k127_1794515_1	1122605.KB893625_gene2325	1.89e-38	147.0	COG4430@1|root,COG4430@2|Bacteria,4NN4Z@976|Bacteroidetes,1IRTA@117747|Sphingobacteriia	976|Bacteroidetes	S	Bacteriocin-protection, YdeI or OmpD-Associated	-	-	-	-	-	-	-	-	-	-	-	-	OmdA
BYD3_k127_1794515_0	929556.Solca_0464	3.742e-67	238.0	COG2169@1|root,COG2169@2|Bacteria	2|Bacteria	K	sequence-specific DNA binding	-	-	2.1.1.63,3.1.31.1,3.2.2.21	ko:K01174,ko:K07720,ko:K10778,ko:K13529,ko:K15051	ko02020,ko03410,map02020,map03410	M00519	-	-	ko00000,ko00001,ko00002,ko01000,ko02022,ko03000,ko03400	-	-	-	Ada_Zn_binding,AraC_N,DNA_binding_1,Endonuclea_NS_2,HTH_18,PocR
BYD3_k127_1794515_2	700598.Niako_7285	4.456e-26	112.0	COG2318@1|root,COG2318@2|Bacteria,4NRSP@976|Bacteroidetes,1IYQJ@117747|Sphingobacteriia	976|Bacteroidetes	S	DinB family	-	-	-	-	-	-	-	-	-	-	-	-	DinB
BYD3_k127_1957977_87	743722.Sph21_4487	3.283e-20	89.0	COG3291@1|root,COG3291@2|Bacteria,4NH7R@976|Bacteroidetes	976|Bacteroidetes	S	Domain of Unknown Function (DUF1080)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1080
BYD3_k127_1957977_32	1340493.JNIF01000003_gene1832	1.477e-116	383.0	COG0620@1|root,COG0620@2|Bacteria	2|Bacteria	E	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation	-	-	2.1.1.14	ko:K00549	ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230	M00017	R04405,R09365	RC00035,RC00113,RC01241	ko00000,ko00001,ko00002,ko01000	-	-	-	Meth_synt_2
BYD3_k127_1957977_81	471854.Dfer_1197	1.982e-24	115.0	COG2207@1|root,COG2207@2|Bacteria,4NEEQ@976|Bacteroidetes,47RA1@768503|Cytophagia	976|Bacteroidetes	K	helix_turn_helix, arabinose operon control protein	pchR	-	-	-	-	-	-	-	-	-	-	-	HTH_18
BYD3_k127_1957977_83	1279009.ADICEAN_02930	1.484e-23	110.0	COG0662@1|root,COG0662@2|Bacteria,4NSGT@976|Bacteroidetes,47RN2@768503|Cytophagia	976|Bacteroidetes	G	Cupin domain	-	-	-	-	-	-	-	-	-	-	-	-	Cupin_2
BYD3_k127_1957977_42	1249997.JHZW01000002_gene608	4.681e-84	296.0	COG0079@1|root,COG0079@2|Bacteria,4NEW8@976|Bacteroidetes,1HXQE@117743|Flavobacteriia,2PI29@252356|Maribacter	976|Bacteroidetes	E	Cys/Met metabolism PLP-dependent enzyme	-	-	2.6.1.9	ko:K00817	ko00340,ko00350,ko00360,ko00400,ko00401,ko00960,ko01100,ko01110,ko01130,ko01230,map00340,map00350,map00360,map00400,map00401,map00960,map01100,map01110,map01130,map01230	M00026	R00694,R00734,R03243	RC00006,RC00888	ko00000,ko00001,ko00002,ko01000,ko01007	-	-	-	Aminotran_1_2
BYD3_k127_1957977_39	1434325.AZQN01000011_gene3742	1.421e-91	307.0	28N6F@1|root,2ZBBB@2|Bacteria,4NGM1@976|Bacteroidetes,47P0U@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_1957977_74	313606.M23134_05213	8.54e-37	153.0	arCOG09742@1|root,2ZBGR@2|Bacteria,4NRNU@976|Bacteroidetes,47V53@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_1957977_52	616991.JPOO01000001_gene3360	7.5e-68	241.0	COG2207@1|root,COG2207@2|Bacteria,4PI6R@976|Bacteroidetes,1IG3A@117743|Flavobacteriia,23IGX@178469|Arenibacter	976|Bacteroidetes	K	helix_turn_helix, arabinose operon control protein	-	-	-	-	-	-	-	-	-	-	-	-	HTH_18
BYD3_k127_1957977_47	388413.ALPR1_15839	1.133e-77	266.0	COG1416@1|root,COG1416@2|Bacteria,4NH85@976|Bacteroidetes,47V7E@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_1957977_56	307480.IW16_07330	1.408e-57	210.0	COG0730@1|root,COG0730@2|Bacteria,4NFWP@976|Bacteroidetes,1HWSW@117743|Flavobacteriia,3ZPW7@59732|Chryseobacterium	976|Bacteroidetes	S	membrane transporter protein	-	-	-	ko:K07090	-	-	-	-	ko00000	-	-	-	TauE
BYD3_k127_1957977_85	700598.Niako_0546	8.737e-23	107.0	2920B@1|root,2ZPJM@2|Bacteria,4P6S4@976|Bacteroidetes	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_1957977_89	1122146.AUHP01000010_gene971	1.907e-16	83.0	COG0484@1|root,COG0484@2|Bacteria,1TP00@1239|Firmicutes,4H9KA@91061|Bacilli,3F490@33958|Lactobacillaceae	91061|Bacilli	O	ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins	dnaJ	-	-	ko:K03686	-	-	-	-	ko00000,ko03029,ko03110	-	-	-	DnaJ,DnaJ_C,DnaJ_CXXCXGXG
BYD3_k127_1957977_86	1453505.JASY01000014_gene4376	1.763e-22	107.0	2EF9N@1|root,3392J@2|Bacteria,4NWC2@976|Bacteroidetes,1IMWS@117743|Flavobacteriia,2NVUY@237|Flavobacterium	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	TPR_6
BYD3_k127_1957977_80	504472.Slin_3773	3.562e-26	111.0	COG1695@1|root,COG1695@2|Bacteria,4P442@976|Bacteroidetes,47V9Z@768503|Cytophagia	976|Bacteroidetes	K	Transcriptional regulator PadR-like family	-	-	-	-	-	-	-	-	-	-	-	-	PadR
BYD3_k127_1957977_28	1185876.BN8_01432	2.27e-129	446.0	COG0577@1|root,COG0577@2|Bacteria,4NDUK@976|Bacteroidetes,47JJN@768503|Cytophagia	976|Bacteroidetes	V	FtsX-like permease family	-	-	-	ko:K02004	-	M00258	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	FtsX,MacB_PCD
BYD3_k127_1957977_37	1123248.KB893326_gene1331	2.504e-93	312.0	COG2120@1|root,COG2120@2|Bacteria	2|Bacteria	S	N-acetylglucosaminylinositol deacetylase activity	-	-	-	ko:K01463	-	-	-	-	ko00000,ko01000	-	-	-	PIG-L
BYD3_k127_1957977_95	1347368.HG964409_gene7228	8.624e-09	66.0	2EIRT@1|root,33CH6@2|Bacteria	2|Bacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_1957977_59	1168034.FH5T_04510	1.604e-51	184.0	COG0614@1|root,COG0614@2|Bacteria,4NQ88@976|Bacteroidetes,2FV11@200643|Bacteroidia	976|Bacteroidetes	P	PD-(D/E)XK nuclease superfamily	-	-	-	-	-	-	-	-	-	-	-	-	PDDEXK_3
BYD3_k127_1957977_60	880073.Calab_3016	5.463e-50	181.0	COG0614@1|root,COG0614@2|Bacteria,2NRKR@2323|unclassified Bacteria	2|Bacteria	P	PD-(D/E)XK nuclease superfamily	-	-	-	-	-	-	-	-	-	-	-	-	PDDEXK_3
BYD3_k127_1957977_16	404589.Anae109_4242	4.517e-152	502.0	COG3829@1|root,COG3829@2|Bacteria,1NU8B@1224|Proteobacteria,43BKG@68525|delta/epsilon subdivisions,2X6YU@28221|Deltaproteobacteria,2YYW6@29|Myxococcales	28221|Deltaproteobacteria	K	ATPase associated with various cellular activities, AAA_5	-	-	-	ko:K02584	ko02020,map02020	-	-	-	ko00000,ko00001,ko03000	-	-	-	GAF,GAF_2,HTH_8,PAS_9,Sigma54_activat
BYD3_k127_1957977_78	243233.MCA2507	6.947e-31	125.0	COG2346@1|root,COG2346@2|Bacteria,1QBDD@1224|Proteobacteria,1S8K7@1236|Gammaproteobacteria,1XF6Z@135618|Methylococcales	135618|Methylococcales	C	Group 1 truncated hemoglobin	-	-	-	ko:K06886	-	-	-	-	ko00000	-	-	-	Bac_globin
BYD3_k127_1957977_17	234267.Acid_5969	4.37e-151	490.0	COG0076@1|root,COG0076@2|Bacteria,3Y365@57723|Acidobacteria	57723|Acidobacteria	E	Pyridoxal-dependent decarboxylase conserved domain	-	-	-	-	-	-	-	-	-	-	-	-	Pyridoxal_deC
BYD3_k127_1957977_40	41431.PCC8801_0005	2.662e-90	303.0	COG2020@1|root,COG2020@2|Bacteria,1G4HN@1117|Cyanobacteria,3KGIV@43988|Cyanothece	1117|Cyanobacteria	O	Isoprenylcysteine carboxyl methyltransferase (ICMT) family	-	-	2.1.1.334	ko:K21310	ko00920,map00920	-	R11546	RC02653	ko00000,ko00001,ko01000	-	-	-	NnrU,PEMT
BYD3_k127_1957977_57	388413.ALPR1_11430	2.225e-53	189.0	COG1695@1|root,COG1695@2|Bacteria,4NTYF@976|Bacteroidetes,47R1G@768503|Cytophagia	976|Bacteroidetes	K	Transcriptional regulator PadR-like family	-	-	-	-	-	-	-	-	-	-	-	-	PadR
BYD3_k127_1957977_3	1185876.BN8_01424	6.394e-308	968.0	COG0577@1|root,COG0577@2|Bacteria,4NDUK@976|Bacteroidetes,47JJN@768503|Cytophagia	976|Bacteroidetes	V	FtsX-like permease family	-	-	-	ko:K02004	-	M00258	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	FtsX,MacB_PCD
BYD3_k127_1957977_100	714943.Mucpa_3211	1.84e-05	48.0	COG0614@1|root,COG0614@2|Bacteria,4NQ88@976|Bacteroidetes,1IT7V@117747|Sphingobacteriia	976|Bacteroidetes	P	PD-(D/E)XK nuclease superfamily	-	-	-	-	-	-	-	-	-	-	-	-	PDDEXK_3
BYD3_k127_1957977_98	880073.Calab_3016	3.161e-07	54.0	COG0614@1|root,COG0614@2|Bacteria,2NRKR@2323|unclassified Bacteria	2|Bacteria	P	PD-(D/E)XK nuclease superfamily	-	-	-	-	-	-	-	-	-	-	-	-	PDDEXK_3
BYD3_k127_1957977_91	761193.Runsl_0103	8.836e-16	79.0	COG0614@1|root,COG0614@2|Bacteria,4NQ88@976|Bacteroidetes,47QDM@768503|Cytophagia	976|Bacteroidetes	P	PD-(D/E)XK nuclease superfamily	-	-	-	-	-	-	-	-	-	-	-	-	PDDEXK_3
BYD3_k127_1957977_9	760192.Halhy_3575	3.052e-178	581.0	COG4993@1|root,COG4993@2|Bacteria,4NFK0@976|Bacteroidetes,1IQUR@117747|Sphingobacteriia	976|Bacteroidetes	C	Pyrrolo-quinoline quinone	-	-	1.1.5.2	ko:K00117	ko00030,ko01100,ko01110,ko01130,map00030,map01100,map01110,map01130	-	R06620	RC00066	ko00000,ko00001,ko01000	-	-	-	Cytochrome_CBB3,PQQ,PQQ_2
BYD3_k127_1957977_66	504472.Slin_0945	2.667e-42	157.0	COG1695@1|root,COG1695@2|Bacteria,4NS5H@976|Bacteroidetes,47QMA@768503|Cytophagia	976|Bacteroidetes	K	Transcriptional regulator PadR-like family	-	-	-	-	-	-	-	-	-	-	-	-	PadR
BYD3_k127_1957977_6	1185876.BN8_01472	6.423e-247	791.0	COG0577@1|root,COG0577@2|Bacteria,4NDUK@976|Bacteroidetes,47JJN@768503|Cytophagia	976|Bacteroidetes	V	FtsX-like permease family	-	-	-	-	-	-	-	-	-	-	-	-	FtsX,MacB_PCD
BYD3_k127_1957977_58	926549.KI421517_gene3127	1.223e-52	190.0	2ATIR@1|root,31J2R@2|Bacteria,4NR1Z@976|Bacteroidetes,47QYN@768503|Cytophagia	976|Bacteroidetes	S	Domain of unknown function (DUF4268)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4268
BYD3_k127_1957977_51	929556.Solca_0266	2.751e-69	263.0	COG0577@1|root,COG0577@2|Bacteria,4NDUK@976|Bacteroidetes,1IW4Z@117747|Sphingobacteriia	976|Bacteroidetes	V	MacB-like periplasmic core domain	-	-	-	ko:K02004	-	M00258	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	FtsX,MacB_PCD
BYD3_k127_1957977_84	1237149.C900_05264	8.567e-23	99.0	COG0614@1|root,COG0614@2|Bacteria,4NQ88@976|Bacteroidetes,47QDM@768503|Cytophagia	976|Bacteroidetes	P	PD-(D/E)XK nuclease superfamily	-	-	-	-	-	-	-	-	-	-	-	-	PDDEXK_3
BYD3_k127_1957977_34	700598.Niako_4616	2.514e-109	361.0	COG1073@1|root,COG1073@2|Bacteria,4NGCE@976|Bacteroidetes,1IWGI@117747|Sphingobacteriia	976|Bacteroidetes	S	Serine aminopeptidase, S33	-	-	-	ko:K06889	-	-	-	-	ko00000	-	-	-	Hydrolase_4
BYD3_k127_1957977_94	643867.Ftrac_3230	5.631e-09	67.0	COG3437@1|root,COG3437@2|Bacteria,4P4ET@976|Bacteroidetes,47V8E@768503|Cytophagia	976|Bacteroidetes	KT	His Kinase A (phosphoacceptor) domain	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_1957977_44	1121904.ARBP01000037_gene2035	5.306e-79	270.0	COG2197@1|root,COG2197@2|Bacteria,4NKAD@976|Bacteroidetes,47NAQ@768503|Cytophagia	976|Bacteroidetes	T	helix_turn_helix, Lux Regulon	-	-	-	-	-	-	-	-	-	-	-	-	GerE,Response_reg
BYD3_k127_1957977_45	1121904.ARBP01000037_gene2034	7.707e-79	284.0	COG2202@1|root,COG4585@1|root,COG2202@2|Bacteria,COG4585@2|Bacteria,4NI65@976|Bacteroidetes	976|Bacteroidetes	T	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase	-	-	-	-	-	-	-	-	-	-	-	-	HATPase_c,HisKA_3,TPR_12,TPR_8
BYD3_k127_1957977_101	272559.BF9343_0783	0.0008459	49.0	COG4219@1|root,COG4219@2|Bacteria,4NDWS@976|Bacteroidetes,2FNCU@200643|Bacteroidia,4ANSE@815|Bacteroidaceae	976|Bacteroidetes	KT	COG NOG25147 non supervised orthologous group	-	-	-	-	-	-	-	-	-	-	-	-	CarbopepD_reg_2,Peptidase_M56,Plug,TonB_C
BYD3_k127_1957977_48	866536.Belba_2258	8.312e-75	270.0	COG0845@1|root,COG0845@2|Bacteria,4NI7Q@976|Bacteroidetes,47JYK@768503|Cytophagia	976|Bacteroidetes	M	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_1957977_79	700598.Niako_1567	3.522e-30	123.0	COG2329@1|root,COG2329@2|Bacteria	2|Bacteria	S	heme oxygenase (decyclizing) activity	-	-	1.14.99.48	ko:K07145	ko00860,ko01110,map00860,map01110	-	R10468,R10510	RC03185	ko00000,ko00001,ko01000	-	-	-	ABM
BYD3_k127_1957977_30	509635.N824_20705	2.202e-123	401.0	COG3507@1|root,COG3507@2|Bacteria,4NDUM@976|Bacteroidetes,1IS1C@117747|Sphingobacteriia	976|Bacteroidetes	G	Belongs to the glycosyl hydrolase 43 family	-	-	-	-	-	-	-	-	-	-	-	-	Glyco_hydro_43
BYD3_k127_1957977_69	1300143.CCAV010000002_gene494	1.987e-41	156.0	COG2329@1|root,COG2329@2|Bacteria,4NUCI@976|Bacteroidetes,1I5MB@117743|Flavobacteriia	976|Bacteroidetes	S	Antibiotic biosynthesis monooxygenase	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_1957977_64	1124780.ANNU01000076_gene803	3.724e-43	162.0	COG1278@1|root,COG1278@2|Bacteria,4NNNH@976|Bacteroidetes,47QKE@768503|Cytophagia	976|Bacteroidetes	K	Cold shock protein domain	cspG	-	-	-	-	-	-	-	-	-	-	-	CSD
BYD3_k127_1957977_96	714943.Mucpa_5062	3.367e-08	59.0	2EC83@1|root,3366K@2|Bacteria,4NWPR@976|Bacteroidetes,1ITW7@117747|Sphingobacteriia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_1957977_22	1239962.C943_04256	1.075e-141	458.0	COG3239@1|root,COG3239@2|Bacteria,4NERD@976|Bacteroidetes,47JP1@768503|Cytophagia	976|Bacteroidetes	I	fatty acid desaturase	-	-	1.14.19.3	ko:K00508	ko00591,ko01100,map00591,map01100	-	R07063	RC00917	ko00000,ko00001,ko01000,ko01004	-	-	-	FA_desaturase
BYD3_k127_1957977_38	643867.Ftrac_0613	2.684e-93	325.0	COG2203@1|root,COG2203@2|Bacteria	2|Bacteria	T	Gaf domain	-	-	-	-	-	-	-	-	-	-	-	-	4HB_MCP_1,GAF_2,HATPase_c,HisKA,PAS_9,Response_reg
BYD3_k127_1957977_13	1185876.BN8_01759	1.051e-164	529.0	COG0520@1|root,COG0520@2|Bacteria,4NF4G@976|Bacteroidetes,47KCX@768503|Cytophagia	976|Bacteroidetes	E	PFAM aminotransferase class V	-	-	-	-	-	-	-	-	-	-	-	-	Aminotran_5
BYD3_k127_1957977_73	313595.P700755_000875	5.533e-38	150.0	2AXAT@1|root,31P9W@2|Bacteria,4PKR4@976|Bacteroidetes,1IJCX@117743|Flavobacteriia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	DUF4303
BYD3_k127_1957977_29	1408813.AYMG01000010_gene441	8.832e-127	414.0	COG3239@1|root,COG3239@2|Bacteria,4NERD@976|Bacteroidetes,1IPZG@117747|Sphingobacteriia	976|Bacteroidetes	I	Fatty acid desaturase	-	-	1.14.19.3	ko:K00508	ko00591,ko01100,map00591,map01100	-	R07063	RC00917	ko00000,ko00001,ko01000,ko01004	-	-	-	FA_desaturase
BYD3_k127_1957977_1	1237149.C900_03907	0.0	1110.0	COG0577@1|root,COG0577@2|Bacteria,4NDUK@976|Bacteroidetes,47JJN@768503|Cytophagia	976|Bacteroidetes	V	FtsX-like permease family	-	-	-	-	-	-	-	-	-	-	-	-	FtsX,MacB_PCD
BYD3_k127_1957977_31	313606.M23134_08164	2.706e-121	395.0	COG0463@1|root,COG0463@2|Bacteria,4NEZP@976|Bacteroidetes,47MB5@768503|Cytophagia	976|Bacteroidetes	M	Glycosyl transferase, family 2	-	-	-	-	-	-	-	-	-	-	-	-	Glyco_tranf_2_4
BYD3_k127_1957977_0	760192.Halhy_0750	0.0	1181.0	COG3250@1|root,COG3250@2|Bacteria,4NFPC@976|Bacteroidetes,1IQJ2@117747|Sphingobacteriia	976|Bacteroidetes	G	Belongs to the glycosyl hydrolase 2 family	cbgA_1	-	-	-	-	-	-	-	-	-	-	-	Glyco_hydro_2,Glyco_hydro_2_C,Glyco_hydro_2_N
BYD3_k127_1957977_8	1121904.ARBP01000015_gene179	2.277e-190	621.0	COG0577@1|root,COG0577@2|Bacteria,4NDUK@976|Bacteroidetes,47NTJ@768503|Cytophagia	976|Bacteroidetes	V	MacB-like periplasmic core domain	-	-	-	ko:K02004	-	M00258	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	FtsX,MacB_PCD
BYD3_k127_1957977_18	1279009.ADICEAN_00022	1.039e-149	485.0	COG0739@1|root,COG0739@2|Bacteria,4NEBZ@976|Bacteroidetes,47JJ1@768503|Cytophagia	976|Bacteroidetes	M	Peptidase family M23	-	-	-	ko:K21472	-	-	-	-	ko00000,ko01000,ko01002,ko01011	-	-	-	Peptidase_M23,SH3_3,SH3_4
BYD3_k127_1957977_82	485918.Cpin_1791	4.702e-24	106.0	COG0745@1|root,COG0745@2|Bacteria,4NXE8@976|Bacteroidetes	976|Bacteroidetes	T	Pfam Response regulator receiver	-	-	-	-	-	-	-	-	-	-	-	-	Response_reg
BYD3_k127_1957977_55	313606.M23134_02672	1.18e-59	231.0	COG0457@1|root,COG0642@1|root,COG0457@2|Bacteria,COG2205@2|Bacteria,4NI29@976|Bacteroidetes,47KZN@768503|Cytophagia	976|Bacteroidetes	T	PFAM Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase	-	-	-	-	-	-	-	-	-	-	-	-	HATPase_c,HisKA,TPR_12,TPR_8
BYD3_k127_1957977_76	760192.Halhy_4181	1.495e-33	136.0	2CKCH@1|root,331PP@2|Bacteria,4NVVQ@976|Bacteroidetes,1IYZD@117747|Sphingobacteriia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_1957977_14	926549.KI421517_gene3204	2.719e-155	499.0	COG2755@1|root,COG2755@2|Bacteria,4NFVN@976|Bacteroidetes,47VUY@768503|Cytophagia	976|Bacteroidetes	E	GDSL-like Lipase/Acylhydrolase	-	-	-	-	-	-	-	-	-	-	-	-	Lipase_GDSL,Lipase_GDSL_2
BYD3_k127_1957977_97	869213.JCM21142_83149	1.748e-07	61.0	2EGII@1|root,33AAP@2|Bacteria,4NXMZ@976|Bacteroidetes,47SQD@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	DUF4890
BYD3_k127_1957977_35	929562.Emtol_0789	2.002e-107	356.0	COG0524@1|root,COG0524@2|Bacteria,4NENQ@976|Bacteroidetes,47MN5@768503|Cytophagia	976|Bacteroidetes	H	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway	rbsK	-	2.7.1.15	ko:K00852	ko00030,map00030	-	R01051,R02750	RC00002,RC00017	ko00000,ko00001,ko01000	-	-	-	PfkB
BYD3_k127_1957977_19	760192.Halhy_5190	1.296e-147	473.0	COG4975@1|root,COG4975@2|Bacteria,4NF22@976|Bacteroidetes,1IQ9T@117747|Sphingobacteriia	976|Bacteroidetes	G	Sugar transport protein	glcU	-	-	ko:K05340	-	-	-	-	ko00000,ko02000	2.A.7.5	-	-	Ureide_permease
BYD3_k127_1957977_26	1123248.KB893329_gene4463	3.393e-132	427.0	COG1082@1|root,COG1082@2|Bacteria,4PJ9G@976|Bacteroidetes,1IZP5@117747|Sphingobacteriia	976|Bacteroidetes	G	Xylose isomerase-like TIM barrel	-	-	4.2.1.44	ko:K03335	ko00562,ko01100,ko01120,map00562,map01100,map01120	-	R02782,R05659	RC00782,RC01448	ko00000,ko00001,ko01000	-	-	-	AP_endonuc_2
BYD3_k127_1957977_4	1123248.KB893329_gene4464	1.569e-290	900.0	COG2303@1|root,COG2303@2|Bacteria,4NFEH@976|Bacteroidetes	976|Bacteroidetes	E	GMC oxidoreductase	-	-	-	-	-	-	-	-	-	-	-	-	GMC_oxred_C,GMC_oxred_N
BYD3_k127_1957977_23	1123248.KB893329_gene4467	3.064e-138	446.0	COG1957@1|root,COG1957@2|Bacteria,4NH09@976|Bacteroidetes,1IRUK@117747|Sphingobacteriia	976|Bacteroidetes	F	Inosine-uridine preferring nucleoside hydrolase	-	-	-	-	-	-	-	-	-	-	-	-	IU_nuc_hydro
BYD3_k127_1957977_50	694427.Palpr_0673	3.333e-71	250.0	COG0491@1|root,COG0491@2|Bacteria,4NYGS@976|Bacteroidetes,2FV0Q@200643|Bacteroidia,2310G@171551|Porphyromonadaceae	976|Bacteroidetes	S	Metallo-beta-lactamase superfamily	-	-	-	-	-	-	-	-	-	-	-	-	Lactamase_B
BYD3_k127_1957977_7	1305737.JAFX01000001_gene608	3.934e-206	666.0	COG0507@1|root,COG0507@2|Bacteria,4NF6J@976|Bacteroidetes,47JK1@768503|Cytophagia	976|Bacteroidetes	L	PIF1-like helicase	-	-	-	-	-	-	-	-	-	-	-	-	HTH_40,Herpes_Helicase,PIF1,UvrD_C_2
BYD3_k127_1957977_88	84531.JMTZ01000167_gene401	5.08e-19	94.0	COG2518@1|root,COG2518@2|Bacteria	2|Bacteria	O	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins	-	-	-	-	-	-	-	-	-	-	-	-	Methyltransf_11,Methyltransf_23,Methyltransf_25
BYD3_k127_1957977_72	700598.Niako_5915	1.446e-40	153.0	COG5531@1|root,COG5531@2|Bacteria	2|Bacteria	B	SWIB/MDM2 domain	-	-	5.99.1.2	ko:K03169	-	-	-	-	ko00000,ko01000,ko03032	-	-	-	SWIB,Topoisom_bac,Toprim,Toprim_Crpt
BYD3_k127_1957977_15	485917.Phep_3344	4.619e-153	489.0	COG4977@1|root,COG4977@2|Bacteria,4NGSR@976|Bacteroidetes,1IWQ6@117747|Sphingobacteriia	976|Bacteroidetes	K	Bacterial regulatory helix-turn-helix proteins, AraC family	-	-	-	-	-	-	-	-	-	-	-	-	DJ-1_PfpI,HTH_18
BYD3_k127_1957977_24	471854.Dfer_0258	1.38e-136	451.0	COG1228@1|root,COG1228@2|Bacteria,4NGGD@976|Bacteroidetes,47R4K@768503|Cytophagia	976|Bacteroidetes	Q	Amidohydrolase family	-	-	-	-	-	-	-	-	-	-	-	-	Amidohydro_1,SnoaL_2
BYD3_k127_1957977_90	81824.XP_001743729.1	4.738e-16	88.0	COG0484@1|root,KOG0714@2759|Eukaryota,38BTN@33154|Opisthokonta	33154|Opisthokonta	O	unfolded protein binding	SIS1	GO:0002181,GO:0002183,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005829,GO:0005840,GO:0006403,GO:0006404,GO:0006412,GO:0006413,GO:0006457,GO:0006508,GO:0006511,GO:0006515,GO:0006518,GO:0006807,GO:0006810,GO:0006886,GO:0006913,GO:0006950,GO:0008104,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009987,GO:0010033,GO:0010467,GO:0010498,GO:0015031,GO:0015833,GO:0015931,GO:0015935,GO:0019538,GO:0019941,GO:0022626,GO:0022627,GO:0030163,GO:0030544,GO:0031072,GO:0032991,GO:0033036,GO:0033554,GO:0034613,GO:0034641,GO:0034645,GO:0035719,GO:0035966,GO:0035967,GO:0042221,GO:0042886,GO:0043043,GO:0043161,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043603,GO:0043604,GO:0043632,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0045184,GO:0046907,GO:0050657,GO:0050658,GO:0050896,GO:0051031,GO:0051082,GO:0051169,GO:0051170,GO:0051179,GO:0051234,GO:0051236,GO:0051603,GO:0051641,GO:0051649,GO:0051716,GO:0051787,GO:0051788,GO:0070727,GO:0070843,GO:0070887,GO:0071218,GO:0071310,GO:0071630,GO:0071702,GO:0071704,GO:0071705,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576,GO:1990904	-	ko:K09510	-	-	-	-	ko00000,ko03110	-	-	-	DnaJ,DnaJ_C
BYD3_k127_1957977_41	1408473.JHXO01000002_gene3933	3.498e-84	285.0	COG0670@1|root,COG0670@2|Bacteria,4NG98@976|Bacteroidetes,2FQXN@200643|Bacteroidia	976|Bacteroidetes	S	Belongs to the BI1 family	ybhL	-	-	ko:K06890	-	-	-	-	ko00000	-	-	-	Bax1-I
BYD3_k127_1957977_43	1279009.ADICEAN_01534	5.603e-80	274.0	COG1496@1|root,COG1496@2|Bacteria,4NM9H@976|Bacteroidetes,47JW0@768503|Cytophagia	976|Bacteroidetes	S	Belongs to the multicopper oxidase YfiH RL5 family	-	GO:0003674,GO:0003824,GO:0005488,GO:0005507,GO:0005515,GO:0008150,GO:0008152,GO:0016491,GO:0016679,GO:0016682,GO:0042802,GO:0042803,GO:0043167,GO:0043169,GO:0046872,GO:0046914,GO:0046983,GO:0055114	-	ko:K05810	-	-	-	-	ko00000,ko01000	-	-	-	Cu-oxidase_4
BYD3_k127_1957977_5	485917.Phep_3551	1.89e-281	882.0	COG0475@1|root,COG0490@1|root,COG0475@2|Bacteria,COG0490@2|Bacteria,4NGF6@976|Bacteroidetes,1IQ4D@117747|Sphingobacteriia	976|Bacteroidetes	P	PFAM sodium hydrogen exchanger	nhaA	-	-	ko:K03455	-	-	-	-	ko00000	2.A.37	-	-	Na_H_Exchanger,TrkA_C
BYD3_k127_1957977_49	1150600.ADIARSV_3314	1.85e-71	246.0	COG1309@1|root,COG1309@2|Bacteria,4NIBT@976|Bacteroidetes,1IS9H@117747|Sphingobacteriia	976|Bacteroidetes	K	PFAM Bacterial regulatory proteins, tetR family	-	-	-	-	-	-	-	-	-	-	-	-	TetR_N
BYD3_k127_1957977_21	509635.N824_23980	3.031e-142	463.0	COG1538@1|root,COG1538@2|Bacteria,4NFSW@976|Bacteroidetes,1IR65@117747|Sphingobacteriia	976|Bacteroidetes	MU	PFAM Outer membrane efflux protein	-	-	-	-	-	-	-	-	-	-	-	-	OEP
BYD3_k127_1957977_33	509635.N824_23985	9.283e-115	377.0	COG1566@1|root,COG1566@2|Bacteria,4PKPZ@976|Bacteroidetes,1J0QN@117747|Sphingobacteriia	976|Bacteroidetes	V	Barrel-sandwich domain of CusB or HlyD membrane-fusion	-	-	-	ko:K01993	-	-	-	-	ko00000	-	-	-	Biotin_lipoyl_2,HlyD_3,HlyD_D23
BYD3_k127_1957977_20	471854.Dfer_5638	2.247e-142	457.0	COG1131@1|root,COG1131@2|Bacteria,4NFW9@976|Bacteroidetes,47MQX@768503|Cytophagia	976|Bacteroidetes	V	ATPases associated with a variety of cellular activities	-	-	-	ko:K01990	-	M00254	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	ABC_tran
BYD3_k127_1957977_27	525257.HMPREF0204_13084	1.261e-129	416.0	COG1131@1|root,COG1131@2|Bacteria,4NFW9@976|Bacteroidetes,1HZ83@117743|Flavobacteriia,3ZU8Z@59732|Chryseobacterium	976|Bacteroidetes	V	AAA domain, putative AbiEii toxin, Type IV TA system	-	-	-	ko:K01990	-	M00254	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	ABC_tran
BYD3_k127_1957977_10	991.IW20_12955	3.251e-174	555.0	COG0842@1|root,COG0842@2|Bacteria,4NDU0@976|Bacteroidetes,1HX8Q@117743|Flavobacteriia,2NT6W@237|Flavobacterium	976|Bacteroidetes	U	ABC-2 type transporter	ybhS	-	-	ko:K01992	-	M00254	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	ABC2_membrane_3
BYD3_k127_1957977_12	509635.N824_24005	8.642e-169	537.0	COG0842@1|root,COG0842@2|Bacteria,4NFM0@976|Bacteroidetes,1IPNI@117747|Sphingobacteriia	976|Bacteroidetes	V	ABC-2 type transporter	-	-	-	ko:K01992	-	M00254	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	ABC2_membrane_3
BYD3_k127_1957977_53	945713.IALB_2920	8.695e-66	241.0	COG2114@1|root,COG2114@2|Bacteria	2|Bacteria	T	Pfam Adenylate and Guanylate cyclase catalytic domain	-	-	4.6.1.1	ko:K01768	ko00230,ko02025,ko04113,ko04213,map00230,map02025,map04113,map04213	M00695	R00089,R00434	RC00295	ko00000,ko00001,ko00002,ko01000	-	-	-	Guanylate_cyc
BYD3_k127_1957977_46	929556.Solca_2569	2.577e-78	263.0	COG2346@1|root,COG2346@2|Bacteria,4NPJ3@976|Bacteroidetes,1ISNH@117747|Sphingobacteriia	976|Bacteroidetes	S	Bacterial-like globin	-	-	-	ko:K06886	-	-	-	-	ko00000	-	-	-	Bac_globin
BYD3_k127_1957977_68	1048983.EL17_20905	1.469e-41	162.0	2DNPI@1|root,32YFD@2|Bacteria,4NWD4@976|Bacteroidetes,47SPH@768503|Cytophagia	976|Bacteroidetes	S	Domain of unknown function (DUF4397)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4397
BYD3_k127_1957977_36	700598.Niako_2665	1.217e-106	352.0	COG1235@1|root,COG1235@2|Bacteria,4NDVI@976|Bacteroidetes,1IR6D@117747|Sphingobacteriia	976|Bacteroidetes	S	COGs COG1235 Metal-dependent hydrolase of the beta-lactamase superfamily I	vicX	-	-	-	-	-	-	-	-	-	-	-	Lactamase_B,Lactamase_B_2
BYD3_k127_1957977_99	1173028.ANKO01000022_gene5432	2.243e-06	56.0	COG0642@1|root,COG0784@1|root,COG2202@1|root,COG5002@1|root,COG0784@2|Bacteria,COG2202@2|Bacteria,COG2205@2|Bacteria,COG5002@2|Bacteria,1G09B@1117|Cyanobacteria	1117|Cyanobacteria	T	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase	-	-	-	-	-	-	-	-	-	-	-	-	CHASE,DUF4118,GAF_2,HATPase_c,HisKA,PAS_3,PAS_4,PAS_9,Response_reg
BYD3_k127_1957977_71	1358423.N180_20140	1.254e-40	153.0	COG1145@1|root,32SB1@2|Bacteria,4NQ8P@976|Bacteroidetes,1ITD6@117747|Sphingobacteriia	976|Bacteroidetes	C	Domain of Unknown Function (DUF326)	-	-	-	-	-	-	-	-	-	-	-	-	DUF326
BYD3_k127_1957977_2	1121904.ARBP01000004_gene1108	0.0	1089.0	COG0577@1|root,COG0577@2|Bacteria,4NDUK@976|Bacteroidetes,47JJN@768503|Cytophagia	976|Bacteroidetes	V	FtsX-like permease family	-	-	-	-	-	-	-	-	-	-	-	-	FtsX,MacB_PCD
BYD3_k127_1957977_25	504472.Slin_6056	6.737e-136	439.0	COG0673@1|root,COG0673@2|Bacteria,4NE75@976|Bacteroidetes,47JGE@768503|Cytophagia	976|Bacteroidetes	S	Oxidoreductase domain protein	-	-	-	-	-	-	-	-	-	-	-	-	GFO_IDH_MocA,GFO_IDH_MocA_C
BYD3_k127_1957977_65	761193.Runsl_2287	1.58e-42	160.0	COG4319@1|root,COG4319@2|Bacteria,4NSGY@976|Bacteroidetes,47RCI@768503|Cytophagia	976|Bacteroidetes	S	Domain of unknown function (DUF4440)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4440
BYD3_k127_1957977_54	761193.Runsl_3835	2.003e-63	223.0	COG0664@1|root,COG0664@2|Bacteria,4NJRX@976|Bacteroidetes,47QTJ@768503|Cytophagia	976|Bacteroidetes	T	Cyclic nucleotide-binding domain	-	-	-	-	-	-	-	-	-	-	-	-	cNMP_binding
BYD3_k127_1957977_77	1121904.ARBP01000001_gene5953	8.746e-33	130.0	COG3631@1|root,COG3631@2|Bacteria,4NVNP@976|Bacteroidetes,47SCI@768503|Cytophagia	976|Bacteroidetes	S	Ketosteroid isomerase-related protein	-	-	-	-	-	-	-	-	-	-	-	-	SnoaL_2
BYD3_k127_1957977_70	330214.NIDE0036	6.971e-41	156.0	COG2259@1|root,COG2259@2|Bacteria,3J13I@40117|Nitrospirae	40117|Nitrospirae	S	Evidence 4 Homologs of previously reported genes of	-	-	-	ko:K15977	-	-	-	-	ko00000	-	-	-	DoxX
BYD3_k127_1957977_11	1443665.JACA01000034_gene2486	3.335e-172	552.0	COG0492@1|root,COG0492@2|Bacteria,4NJFI@976|Bacteroidetes,1IHGP@117743|Flavobacteriia,2YH76@290174|Aquimarina	976|Bacteroidetes	O	L-lysine 6-monooxygenase (NADPH-requiring)	-	-	-	-	-	-	-	-	-	-	-	-	Pyr_redox_3
BYD3_k127_1957977_67	314270.RB2083_4031	3.642e-42	169.0	COG0477@1|root,COG2814@2|Bacteria,1MW1P@1224|Proteobacteria	1224|Proteobacteria	EGP	Major facilitator Superfamily	-	-	-	-	-	-	-	-	-	-	-	-	MFS_1
BYD3_k127_1957977_62	376686.Fjoh_4426	3.99e-46	172.0	COG1595@1|root,COG1595@2|Bacteria,4NU6U@976|Bacteroidetes,1I42V@117743|Flavobacteriia,2NXKP@237|Flavobacterium	976|Bacteroidetes	K	Belongs to the sigma-70 factor family. ECF subfamily	-	-	-	ko:K03088	-	-	-	-	ko00000,ko03021	-	-	-	Sigma70_r2,Sigma70_r4_2
BYD3_k127_1957977_75	246194.CHY_1709	4.867e-36	143.0	COG1595@1|root,COG1595@2|Bacteria,1V3G9@1239|Firmicutes,24G1Y@186801|Clostridia	186801|Clostridia	K	Belongs to the sigma-70 factor family. ECF subfamily	-	-	-	ko:K03088	-	-	-	-	ko00000,ko03021	-	-	-	Sigma70_r2,Sigma70_r4_2
BYD3_k127_1957977_61	1249997.JHZW01000002_gene713	1.374e-47	175.0	COG1247@1|root,COG1247@2|Bacteria,4NNGH@976|Bacteroidetes,1I246@117743|Flavobacteriia,2PHCW@252356|Maribacter	976|Bacteroidetes	M	Acetyltransferase (GNAT) domain	-	-	2.3.1.183	ko:K03823	ko00440,ko01130,map00440,map01130	-	R08871,R08938	RC00004,RC00064	ko00000,ko00001,ko01000	-	-	-	Acetyltransf_1,Acetyltransf_4
BYD3_k127_1957977_63	714943.Mucpa_4122	6.262e-45	164.0	COG1069@1|root,COG1069@2|Bacteria,4NEFQ@976|Bacteroidetes,1IQ36@117747|Sphingobacteriia	976|Bacteroidetes	G	Belongs to the ribulokinase family	araB	-	2.7.1.16	ko:K00853	ko00040,ko01100,map00040,map01100	-	R01526,R02439	RC00002,RC00538	ko00000,ko00001,ko01000	-	-	-	FGGY_C,FGGY_N
BYD3_k127_1979408_20	1046627.BZARG_2013	3.007e-14	74.0	COG0454@1|root,COG0454@2|Bacteria,4NPMJ@976|Bacteroidetes,1I2CX@117743|Flavobacteriia	976|Bacteroidetes	K	Acetyltransferase (GNAT) domain	-	-	-	-	-	-	-	-	-	-	-	-	Acetyltransf_1
BYD3_k127_1979408_13	1313421.JHBV01000014_gene3829	3.237e-54	194.0	COG0346@1|root,COG0346@2|Bacteria,4NREW@976|Bacteroidetes,1IYKH@117747|Sphingobacteriia	976|Bacteroidetes	E	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily	-	-	-	-	-	-	-	-	-	-	-	-	Glyoxalase
BYD3_k127_1979408_18	1185876.BN8_02809	1.597e-33	134.0	2DPXD@1|root,333T1@2|Bacteria,4NZI7@976|Bacteroidetes,47WC4@768503|Cytophagia	976|Bacteroidetes	S	Domain of unknown function (DUF4440)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4440
BYD3_k127_1979408_8	269798.CHU_2272	2.204e-80	273.0	29R44@1|root,30C5C@2|Bacteria,4NN15@976|Bacteroidetes,47PN2@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_1979408_17	1121899.Q764_04265	7.509e-34	135.0	2DM52@1|root,32UG7@2|Bacteria,4NSYJ@976|Bacteroidetes,1I4AH@117743|Flavobacteriia,2NWIC@237|Flavobacterium	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	Lipocalin_4
BYD3_k127_1979408_7	1124780.ANNU01000045_gene2287	9.754e-87	289.0	COG0193@1|root,COG0193@2|Bacteria,4NI7N@976|Bacteroidetes,47Q0M@768503|Cytophagia	976|Bacteroidetes	J	The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis	pth	GO:0003674,GO:0003824,GO:0004045,GO:0016787,GO:0016788,GO:0052689,GO:0140098,GO:0140101	3.1.1.29	ko:K01056	-	-	-	-	ko00000,ko01000,ko03012	-	-	-	Pept_tRNA_hydro
BYD3_k127_1979408_11	643867.Ftrac_0552	1.222e-70	245.0	COG1825@1|root,COG1825@2|Bacteria,4NEN6@976|Bacteroidetes,47NVP@768503|Cytophagia	976|Bacteroidetes	J	This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance	ctc	GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008097,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904	-	ko:K02897	ko03010,map03010	M00178	-	-	ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_L25p,Ribosomal_TL5_C
BYD3_k127_1979408_6	1237149.C900_01650	1.188e-152	487.0	COG0462@1|root,COG0462@2|Bacteria,4NEVF@976|Bacteroidetes,47MGR@768503|Cytophagia	976|Bacteroidetes	EF	Ribose-phosphate pyrophosphokinase	prs	-	2.7.6.1	ko:K00948	ko00030,ko00230,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00230,map01100,map01110,map01120,map01130,map01200,map01230	M00005	R01049	RC00002,RC00078	ko00000,ko00001,ko00002,ko01000	-	-	-	Pribosyl_synth,Pribosyltran_N
BYD3_k127_1979408_0	1237149.C900_01647	0.0	1746.0	COG0046@1|root,COG0047@1|root,COG0046@2|Bacteria,COG0047@2|Bacteria,4NETY@976|Bacteroidetes,47NAM@768503|Cytophagia	976|Bacteroidetes	F	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL	purL	-	6.3.5.3	ko:K01952	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	M00048	R04463	RC00010,RC01160	ko00000,ko00001,ko00002,ko01000	-	-	-	AIRS_C,GATase_5
BYD3_k127_1979408_9	643867.Ftrac_0548	3.421e-76	263.0	COG2267@1|root,COG2267@2|Bacteria,4NPD2@976|Bacteroidetes,47XYA@768503|Cytophagia	976|Bacteroidetes	I	alpha/beta hydrolase fold	-	-	-	-	-	-	-	-	-	-	-	-	Abhydrolase_1
BYD3_k127_1979408_15	760192.Halhy_0634	7.803e-45	184.0	COG2972@1|root,COG3292@1|root,COG2972@2|Bacteria,COG3292@2|Bacteria,4NFZB@976|Bacteroidetes,1IW1C@117747|Sphingobacteriia	976|Bacteroidetes	T	Y_Y_Y domain	-	-	-	-	-	-	-	-	-	-	-	-	His_kinase,Reg_prop,Y_Y_Y
BYD3_k127_1979408_12	391603.FBALC1_09522	3.363e-69	242.0	COG3279@1|root,COG3279@2|Bacteria,4NFPV@976|Bacteroidetes,1I0QN@117743|Flavobacteriia	976|Bacteroidetes	T	LytTr DNA-binding domain	-	-	-	ko:K02477	-	-	-	-	ko00000,ko02022	-	-	-	LytTR,Response_reg
BYD3_k127_1979408_1	1048983.EL17_18930	8.962e-309	965.0	COG1629@1|root,COG1629@2|Bacteria,4PKVH@976|Bacteroidetes,47K3W@768503|Cytophagia	976|Bacteroidetes	P	PFAM TonB-dependent Receptor Plug	-	-	-	-	-	-	-	-	-	-	-	-	CarbopepD_reg_2,CarboxypepD_reg,Plug,TonB_dep_Rec
BYD3_k127_1979408_5	700598.Niako_1610	1.899e-213	672.0	COG0673@1|root,COG0673@2|Bacteria,4NEN5@976|Bacteroidetes,1IRBM@117747|Sphingobacteriia	976|Bacteroidetes	S	Oxidoreductase	-	-	-	-	-	-	-	-	-	-	-	-	GFO_IDH_MocA
BYD3_k127_1979408_3	1279009.ADICEAN_02475	1.25e-247	771.0	COG0673@1|root,COG0673@2|Bacteria,4NEN5@976|Bacteroidetes,47JNX@768503|Cytophagia	976|Bacteroidetes	S	PFAM Oxidoreductase family, NAD-binding Rossmann fold	-	-	-	-	-	-	-	-	-	-	-	-	GFO_IDH_MocA
BYD3_k127_1979408_10	1123248.KB893336_gene2835	3.652e-74	255.0	2CISN@1|root,2Z7MB@2|Bacteria,4NFJX@976|Bacteroidetes,1ISGE@117747|Sphingobacteriia	976|Bacteroidetes	S	Gluconate 2-dehydrogenase subunit 3	-	-	-	-	-	-	-	-	-	-	-	-	Gluconate_2-dh3
BYD3_k127_1979408_2	1123248.KB893348_gene328	2.251e-303	937.0	COG2303@1|root,COG2303@2|Bacteria,4NEHP@976|Bacteroidetes	976|Bacteroidetes	E	Oxidoreductase	-	-	-	-	-	-	-	-	-	-	-	-	FAD_binding_2,GMC_oxred_C,GMC_oxred_N
BYD3_k127_1979408_19	1124780.ANNU01000017_gene1931	9.335e-31	122.0	COG0759@1|root,COG0759@2|Bacteria,4NV1N@976|Bacteroidetes,47RUP@768503|Cytophagia	976|Bacteroidetes	S	Could be involved in insertion of integral membrane proteins into the membrane	-	-	-	ko:K08998	-	-	-	-	ko00000	-	-	-	Haemolytic
BYD3_k127_1979408_4	1237149.C900_03333	2.4e-224	704.0	COG0215@1|root,COG0215@2|Bacteria,4NE3Y@976|Bacteroidetes,47MAW@768503|Cytophagia	976|Bacteroidetes	J	Belongs to the class-I aminoacyl-tRNA synthetase family	cysS	GO:0000166,GO:0003674,GO:0003824,GO:0004812,GO:0004817,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006423,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0017076,GO:0019538,GO:0019752,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0034645,GO:0034660,GO:0035639,GO:0036094,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0097159,GO:0097367,GO:0140098,GO:0140101,GO:1901265,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576	6.1.1.16	ko:K01883	ko00970,map00970	M00359,M00360	R03650	RC00055,RC00523	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	-	-	-	DALR_2,tRNA-synt_1e
BYD3_k127_1979408_16	1120965.AUBV01000012_gene1411	9.58e-39	148.0	COG1629@1|root,COG1629@2|Bacteria,4NDXS@976|Bacteroidetes,47KDP@768503|Cytophagia	976|Bacteroidetes	P	TonB dependent receptor	-	-	-	-	-	-	-	-	-	-	-	-	CarbopepD_reg_2,Plug,TonB_dep_Rec
BYD3_k127_1983234_3	1506583.JQJY01000007_gene4078	3.922e-25	117.0	COG1345@1|root,COG1361@1|root,COG4386@1|root,COG4733@1|root,COG1345@2|Bacteria,COG1361@2|Bacteria,COG4386@2|Bacteria,COG4733@2|Bacteria,4NFVP@976|Bacteroidetes,1HY1K@117743|Flavobacteriia,2NSFX@237|Flavobacterium	976|Bacteroidetes	N	PFAM SMP-30 Gluconolaconase	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_1983234_1	700598.Niako_3060	1.042e-114	410.0	COG3209@1|root,COG3209@2|Bacteria,4NHYT@976|Bacteroidetes,1ISP2@117747|Sphingobacteriia	976|Bacteroidetes	M	TIGRFAM YD repeat	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_1983234_2	1267534.KB906754_gene2605	1.298e-25	117.0	COG4270@1|root,COG4270@2|Bacteria,3Y5DS@57723|Acidobacteria,2JN6B@204432|Acidobacteriia	204432|Acidobacteriia	S	Membrane	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_1983234_0	1237149.C900_01296	2.873e-124	417.0	COG0577@1|root,COG0577@2|Bacteria,4NDUK@976|Bacteroidetes,47JJN@768503|Cytophagia	976|Bacteroidetes	V	FtsX-like permease family	-	-	-	-	-	-	-	-	-	-	-	-	FtsX,MacB_PCD
BYD3_k127_1993462_14	509635.N824_22715	1.682e-134	433.0	COG3828@1|root,COG3828@2|Bacteria,4NJK6@976|Bacteroidetes,1IR19@117747|Sphingobacteriia	976|Bacteroidetes	S	Trehalose utilisation	-	-	-	-	-	-	-	-	-	-	-	-	ThuA
BYD3_k127_1993462_0	1123248.KB893370_gene5141	0.0	1733.0	COG1413@1|root,COG2010@1|root,COG2133@1|root,COG2755@1|root,COG1413@2|Bacteria,COG2010@2|Bacteria,COG2133@2|Bacteria,COG2755@2|Bacteria,4NEQA@976|Bacteroidetes,1J0QI@117747|Sphingobacteriia	976|Bacteroidetes	C	Cytochrome c	-	-	-	-	-	-	-	-	-	-	-	-	Cytochrom_C,Cytochrome_CBB3,HEAT_2,Lipase_GDSL_2
BYD3_k127_1993462_15	1123248.KB893370_gene5143	5.693e-129	417.0	COG1082@1|root,COG1082@2|Bacteria,4NHGW@976|Bacteroidetes,1ITB5@117747|Sphingobacteriia	976|Bacteroidetes	G	PFAM Xylose isomerase-like TIM barrel	-	-	5.1.3.30,5.1.3.31	ko:K18910	-	-	R10817,R10818	RC03111,RC03283	ko00000,ko01000	-	-	-	AP_endonuc_2,AP_endonuc_2_N
BYD3_k127_1993462_4	269798.CHU_1663	1.107e-251	800.0	COG4251@1|root,COG4251@2|Bacteria,4NE3J@976|Bacteroidetes,47MRF@768503|Cytophagia	976|Bacteroidetes	T	Histidine kinase	-	-	-	-	-	-	-	-	-	-	-	-	HATPase_c,HisKA,PAS,PAS_3,PAS_4,PAS_9
BYD3_k127_1993462_34	1121373.KB903627_gene2953	1.933e-24	107.0	COG0745@1|root,COG0745@2|Bacteria,4NXE8@976|Bacteroidetes,47RYQ@768503|Cytophagia	976|Bacteroidetes	T	cheY-homologous receiver domain	-	-	-	-	-	-	-	-	-	-	-	-	Response_reg
BYD3_k127_1993462_16	504472.Slin_0879	2.995e-117	383.0	COG1741@1|root,COG1741@2|Bacteria,4NJYY@976|Bacteroidetes,47Q1P@768503|Cytophagia	976|Bacteroidetes	S	Belongs to the pirin family	-	-	-	ko:K06911	-	-	-	-	ko00000	-	-	-	Pirin,Pirin_C
BYD3_k127_1993462_19	1123248.KB893359_gene2189	2.009e-87	297.0	COG0657@1|root,COG2755@1|root,COG0657@2|Bacteria,COG2755@2|Bacteria,4NHBT@976|Bacteroidetes,1ISWB@117747|Sphingobacteriia	976|Bacteroidetes	E	GDSL-like Lipase/Acylhydrolase	-	-	-	-	-	-	-	-	-	-	-	-	Lipase_GDSL_2
BYD3_k127_1993462_30	1296416.JACB01000036_gene2922	3.047e-38	147.0	2BVXR@1|root,32QYG@2|Bacteria,4NQMX@976|Bacteroidetes,1I3BN@117743|Flavobacteriia,2YJQZ@290174|Aquimarina	976|Bacteroidetes	S	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase	-	-	-	-	-	-	-	-	-	-	-	-	DoxX
BYD3_k127_1993462_2	1239962.C943_00117	4.56e-291	925.0	COG1413@1|root,COG2010@1|root,COG2133@1|root,COG1413@2|Bacteria,COG2010@2|Bacteria,COG2133@2|Bacteria,4NPTY@976|Bacteroidetes,47UCB@768503|Cytophagia	976|Bacteroidetes	C	Cytochrome c	-	-	-	-	-	-	-	-	-	-	-	-	Cytochrom_C
BYD3_k127_1993462_10	509635.N824_26985	2.018e-149	483.0	COG2133@1|root,COG2133@2|Bacteria,4PIUD@976|Bacteroidetes,1IXS9@117747|Sphingobacteriia	976|Bacteroidetes	G	Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella	-	-	-	-	-	-	-	-	-	-	-	-	VCBS
BYD3_k127_1993462_27	1121904.ARBP01000021_gene3605	3.789e-54	192.0	COG2076@1|root,COG2076@2|Bacteria,4NQ4U@976|Bacteroidetes,47R8W@768503|Cytophagia	976|Bacteroidetes	P	PFAM small multidrug resistance protein	sugE	-	-	ko:K11741	-	-	-	-	ko00000,ko02000	2.A.7.1	-	-	Multi_Drug_Res
BYD3_k127_1993462_33	1121904.ARBP01000027_gene714	7.318e-29	118.0	COG1695@1|root,COG1695@2|Bacteria,4NQJP@976|Bacteroidetes,47QWB@768503|Cytophagia	976|Bacteroidetes	K	Transcriptional regulator PadR-like family	-	-	-	-	-	-	-	-	-	-	-	-	PadR
BYD3_k127_1993462_7	1121904.ARBP01000015_gene179	1.304e-190	627.0	COG0577@1|root,COG0577@2|Bacteria,4NDUK@976|Bacteroidetes,47NTJ@768503|Cytophagia	976|Bacteroidetes	V	MacB-like periplasmic core domain	-	-	-	ko:K02004	-	M00258	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	FtsX,MacB_PCD
BYD3_k127_1993462_25	1211035.CD30_18325	1.162e-61	214.0	COG0346@1|root,COG0346@2|Bacteria,1V6FU@1239|Firmicutes,4HIRR@91061|Bacilli,3IXZE@400634|Lysinibacillus	91061|Bacilli	E	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily	-	-	-	ko:K07032	-	-	-	-	ko00000	-	-	-	Glyoxalase
BYD3_k127_1993462_24	509635.N824_18590	4.256e-68	239.0	COG2207@1|root,COG2207@2|Bacteria,4NISK@976|Bacteroidetes,1IVFY@117747|Sphingobacteriia	976|Bacteroidetes	K	Helix-turn-helix domain	-	-	-	-	-	-	-	-	-	-	-	-	HTH_18
BYD3_k127_1993462_21	1185876.BN8_01417	6.85e-76	261.0	COG3279@1|root,COG3279@2|Bacteria,4NF8U@976|Bacteroidetes,47Q2C@768503|Cytophagia	976|Bacteroidetes	T	LytTr DNA-binding domain	-	-	-	-	-	-	-	-	-	-	-	-	LytTR,Response_reg
BYD3_k127_1993462_26	509635.N824_22865	4.963e-61	223.0	COG2972@1|root,COG2972@2|Bacteria,4NH1Q@976|Bacteroidetes,1ISFF@117747|Sphingobacteriia	976|Bacteroidetes	T	Histidine kinase	-	-	-	-	-	-	-	-	-	-	-	-	His_kinase
BYD3_k127_1993462_23	1237149.C900_04989	4.62e-72	249.0	COG3485@1|root,COG3485@2|Bacteria,4NEZ1@976|Bacteroidetes,47QHP@768503|Cytophagia	976|Bacteroidetes	Q	Dioxygenase	-	-	1.13.11.3	ko:K00449	ko00362,ko00624,ko01100,ko01120,ko01220,map00362,map00624,map01100,map01120,map01220	-	R01631,R03549	RC00388,RC00953	br01602,ko00000,ko00001,ko01000	-	-	-	Dioxygenase_C
BYD3_k127_1993462_28	344747.PM8797T_27557	3.484e-48	186.0	COG2755@1|root,COG3055@1|root,COG2755@2|Bacteria,COG3055@2|Bacteria,2IY7R@203682|Planctomycetes	203682|Planctomycetes	E	Kelch motif	-	-	-	-	-	-	-	-	-	-	-	-	Kelch_1
BYD3_k127_1993462_3	504472.Slin_0936	1.222e-276	871.0	COG0577@1|root,COG0577@2|Bacteria,4NDUK@976|Bacteroidetes,47JJN@768503|Cytophagia	976|Bacteroidetes	V	FtsX-like permease family	-	-	-	-	-	-	-	-	-	-	-	-	FtsX,MacB_PCD
BYD3_k127_1993462_1	1123248.KB893359_gene2193	0.0	1635.0	COG0587@1|root,COG0587@2|Bacteria,4NGTT@976|Bacteroidetes,1IQQT@117747|Sphingobacteriia	976|Bacteroidetes	L	Belongs to the DNA polymerase type-C family. DnaE2 subfamily	-	-	2.7.7.7	ko:K14162	-	-	-	-	ko00000,ko01000,ko03400	-	-	-	DNA_pol3_alpha,HHH_6,PHP,tRNA_anti-codon
BYD3_k127_1993462_6	1123248.KB893359_gene2194	1.445e-208	659.0	COG0389@1|root,COG0389@2|Bacteria,4NII1@976|Bacteroidetes,1IQUQ@117747|Sphingobacteriia	976|Bacteroidetes	L	Nucleotidyltransferase DNA polymerase involved in DNA repair	-	-	-	ko:K14161	-	-	-	-	ko00000,ko03400	-	-	-	IMS
BYD3_k127_1993462_20	485918.Cpin_3382	3.556e-77	265.0	COG4544@1|root,COG4544@2|Bacteria,4NN6K@976|Bacteroidetes,1IS0M@117747|Sphingobacteriia	976|Bacteroidetes	S	Component of the SOS system and an inhibitor of cell division. Accumulation of SulA causes rapid cessation of cell division and the appearance of long, non-septate filaments. In the presence of GTP, binds a polymerization-competent form of FtsZ in a 1 1 ratio, thus inhibiting FtsZ polymerization and therefore preventing it from participating in the assembly of the Z ring. This mechanism prevents the premature segregation of damaged DNA to daughter cells during cell division	-	-	-	ko:K14160	-	-	-	-	ko00000,ko03400	-	-	-	-
BYD3_k127_1993462_8	1288963.ADIS_0344	1.231e-183	581.0	COG3616@1|root,COG3616@2|Bacteria	2|Bacteria	E	Alanine racemase, N-terminal domain	dhaa	-	4.1.2.42,4.1.3.41	ko:K18425,ko:K19967	-	-	-	-	ko00000,ko01000	-	-	-	Ala_racemase_N,D-ser_dehydrat
BYD3_k127_1993462_31	880071.Fleli_0896	1.854e-37	155.0	COG4099@1|root,COG4099@2|Bacteria,4NFSH@976|Bacteroidetes,47M41@768503|Cytophagia	976|Bacteroidetes	S	Phospholipase	-	-	-	-	-	-	-	-	-	-	-	-	Abhydrolase_2,DLH,Esterase,Peptidase_S9
BYD3_k127_1993462_5	1120919.AUBI01000004_gene1956	1.225e-217	697.0	COG2010@1|root,COG4993@1|root,COG2010@2|Bacteria,COG4993@2|Bacteria,1MUQX@1224|Proteobacteria,2TS2Q@28211|Alphaproteobacteria,2JR1Q@204441|Rhodospirillales	204441|Rhodospirillales	G	PQQ-like domain	-	-	-	-	-	-	-	-	-	-	-	-	Cytochrome_CBB3,PQQ,PQQ_2
BYD3_k127_1993462_12	1121904.ARBP01000045_gene1842	3.426e-141	482.0	COG0457@1|root,COG0642@1|root,COG0745@1|root,COG0457@2|Bacteria,COG0745@2|Bacteria,COG2205@2|Bacteria,4NDXU@976|Bacteroidetes,47TVA@768503|Cytophagia	976|Bacteroidetes	T	helix_turn_helix, arabinose operon control protein	-	-	-	-	-	-	-	-	-	-	-	-	HATPase_c,HTH_18,HisKA,Reg_prop,Response_reg,TPR_12,TPR_8,Y_Y_Y
BYD3_k127_1993462_17	1121875.KB907549_gene1916	2.25e-101	345.0	COG3503@1|root,COG3503@2|Bacteria,4NFAF@976|Bacteroidetes,1HX24@117743|Flavobacteriia	976|Bacteroidetes	S	Protein of unknown function (DUF1624)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1624
BYD3_k127_1993462_22	172045.KS04_14195	8.96e-75	267.0	COG0642@1|root,COG0642@2|Bacteria,4NEW4@976|Bacteroidetes,1HZ62@117743|Flavobacteriia	976|Bacteroidetes	T	Histidine kinase	-	-	-	-	-	-	-	-	-	-	-	-	HATPase_c,HisKA
BYD3_k127_1993462_18	172045.KS04_14190	2.468e-95	317.0	COG0745@1|root,COG0745@2|Bacteria,4NGVV@976|Bacteroidetes,1HXES@117743|Flavobacteriia	976|Bacteroidetes	T	Response regulator receiver domain	-	-	-	-	-	-	-	-	-	-	-	-	Response_reg,Trans_reg_C
BYD3_k127_1993462_36	1341155.FSS13T_12920	1.266e-22	98.0	2E4IE@1|root,32ZDH@2|Bacteria,4NUR6@976|Bacteroidetes,1I59Y@117743|Flavobacteriia,2NXBM@237|Flavobacterium	976|Bacteroidetes	S	Domain of unknown function (DUF4266)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4266
BYD3_k127_1993462_13	929562.Emtol_3569	1.197e-137	443.0	COG1477@1|root,COG1477@2|Bacteria,4NGEK@976|Bacteroidetes,47JH9@768503|Cytophagia	976|Bacteroidetes	H	Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein	apbE	-	2.7.1.180	ko:K03734	-	-	-	-	ko00000,ko01000	-	-	-	ApbE
BYD3_k127_1993462_29	1150600.ADIARSV_2933	1.393e-43	164.0	COG0526@1|root,COG0526@2|Bacteria,4NQ50@976|Bacteroidetes,1ISYV@117747|Sphingobacteriia	976|Bacteroidetes	CO	Thioredoxin-like	-	-	-	-	-	-	-	-	-	-	-	-	Thioredoxin_7
BYD3_k127_1993462_11	1123248.KB893370_gene4974	3.631e-142	461.0	COG2067@1|root,COG2067@2|Bacteria,4NG1B@976|Bacteroidetes,1IPKX@117747|Sphingobacteriia	976|Bacteroidetes	I	Protein of unknown function (DUF3570)	-	-	-	-	-	-	-	-	-	-	-	-	DUF3570
BYD3_k127_1993462_9	509635.N824_20500	1.236e-164	525.0	COG4123@1|root,COG4123@2|Bacteria,4NGDY@976|Bacteroidetes,1IV6Q@117747|Sphingobacteriia	976|Bacteroidetes	S	Dimerisation domain	-	-	-	-	-	-	-	-	-	-	-	-	Dimerisation2,Methyltransf_2
BYD3_k127_2049706_4	292459.STH2197	6.735e-08	66.0	COG2373@1|root,COG2373@2|Bacteria	2|Bacteria	U	Large extracellular alpha-helical protein	-	-	-	ko:K13735,ko:K20276	ko02024,ko05100,map02024,map05100	-	-	-	ko00000,ko00001	-	-	-	CHU_C,Cadherin-like,Calx-beta,SLH,SprB
BYD3_k127_2049706_1	313606.M23134_00848	7.666e-62	243.0	COG4733@1|root,COG4733@2|Bacteria,4PMCT@976|Bacteroidetes,47Y15@768503|Cytophagia	976|Bacteroidetes	M	Fibronectin type 3 domain	-	-	-	-	-	-	-	-	-	-	-	-	VCBS
BYD3_k127_2049706_3	1250278.JQNQ01000001_gene2	3.172e-34	136.0	COG0577@1|root,COG0577@2|Bacteria,4NDUK@976|Bacteroidetes,1HX0V@117743|Flavobacteriia	976|Bacteroidetes	V	COG0577 ABC-type antimicrobial peptide transport system permease component	-	-	-	ko:K02004	-	M00258	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	FtsX,MacB_PCD
BYD3_k127_2049706_0	1123278.KB893581_gene981	3.844e-146	478.0	COG0577@1|root,COG0577@2|Bacteria,4NDUK@976|Bacteroidetes,47KZI@768503|Cytophagia	976|Bacteroidetes	V	MacB-like periplasmic core domain	-	-	-	ko:K02004	-	M00258	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	FtsX,MacB_PCD
BYD3_k127_2049706_2	760192.Halhy_3909	2.274e-42	160.0	COG0577@1|root,COG0577@2|Bacteria,4NDUK@976|Bacteroidetes,1IQ0T@117747|Sphingobacteriia	976|Bacteroidetes	V	MacB-like periplasmic core domain	-	-	-	ko:K02004	-	M00258	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	FtsX,MacB_PCD
BYD3_k127_20837_42	1123035.ARLA01000026_gene72	3.548e-36	140.0	COG0584@1|root,COG0584@2|Bacteria,4NGI1@976|Bacteroidetes,1I0PI@117743|Flavobacteriia,4C3I6@83612|Psychroflexus	976|Bacteroidetes	C	Glycerophosphoryl diester phosphodiesterase family	glpQ	-	3.1.4.46	ko:K01126	ko00564,map00564	-	R01030,R01470	RC00017,RC00425	ko00000,ko00001,ko01000	-	-	-	GDPD,Phytase-like
BYD3_k127_20837_32	1185876.BN8_05616	2.238e-54	195.0	COG3542@1|root,COG3542@2|Bacteria,4NPCH@976|Bacteroidetes,47PD8@768503|Cytophagia	976|Bacteroidetes	S	Cupin superfamily (DUF985)	-	-	-	ko:K09705	-	-	-	-	ko00000	-	-	-	Cupin_5
BYD3_k127_20837_3	1123248.KB893328_gene890	6.159e-216	692.0	COG2133@1|root,COG2133@2|Bacteria,4NIJA@976|Bacteroidetes	976|Bacteroidetes	G	Glucose / Sorbosone dehydrogenase	-	-	-	-	-	-	-	-	-	-	-	-	CBM9_1,GSDH,I-set,Ig_3
BYD3_k127_20837_1	1124780.ANNU01000008_gene2704	7.403e-285	893.0	COG1629@1|root,COG4771@2|Bacteria,4NF4B@976|Bacteroidetes	976|Bacteroidetes	P	TonB-dependent receptor	-	-	-	-	-	-	-	-	-	-	-	-	CarbopepD_reg_2,Plug,TonB_dep_Rec
BYD3_k127_20837_37	272123.Anacy_2785	1.8e-45	171.0	COG0778@1|root,COG0778@2|Bacteria,1G42X@1117|Cyanobacteria,1HR04@1161|Nostocales	1117|Cyanobacteria	C	Nitroreductase family	-	-	-	-	-	-	-	-	-	-	-	-	Nitroreductase
BYD3_k127_20837_40	761193.Runsl_5177	7.984e-43	161.0	COG1846@1|root,COG1846@2|Bacteria,4NQ5T@976|Bacteroidetes,47QE6@768503|Cytophagia	976|Bacteroidetes	K	transcriptional regulator	-	-	-	-	-	-	-	-	-	-	-	-	MarR,MarR_2
BYD3_k127_20837_34	153721.MYP_3617	4.358e-52	188.0	COG4430@1|root,COG4430@2|Bacteria,4NR0U@976|Bacteroidetes,47PZ9@768503|Cytophagia	976|Bacteroidetes	S	Domain of unknown function (DUF1905)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1905,OmdA
BYD3_k127_20837_20	761193.Runsl_1670	2.126e-106	350.0	COG1028@1|root,COG1028@2|Bacteria,4NF64@976|Bacteroidetes,47MEC@768503|Cytophagia	976|Bacteroidetes	IQ	PFAM Short-chain dehydrogenase reductase SDR	-	-	1.1.1.100	ko:K00059	ko00061,ko00333,ko00780,ko01040,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01040,map01100,map01130,map01212	M00083,M00572	R04533,R04534,R04536,R04543,R04566,R04953,R04964,R07759,R07763,R10116,R10120,R11671	RC00029,RC00117	ko00000,ko00001,ko00002,ko01000,ko01004	-	-	-	adh_short_C2
BYD3_k127_20837_2	1123248.KB893370_gene5077	8.344e-262	826.0	COG0380@1|root,COG1877@1|root,COG0380@2|Bacteria,COG1877@2|Bacteria,4NGJ4@976|Bacteroidetes,1IVIN@117747|Sphingobacteriia	976|Bacteroidetes	G	Trehalose-phosphatase	-	-	2.4.1.15,3.1.3.12	ko:K16055	ko00500,ko01100,map00500,map01100	-	R02737,R02778	RC00005,RC00017,RC00049,RC02748	ko00000,ko00001,ko01000,ko01003	-	GT20	-	Glyco_transf_20,Trehalose_PPase
BYD3_k127_20837_8	929556.Solca_0644	1.127e-172	547.0	COG2957@1|root,COG2957@2|Bacteria,4NGF8@976|Bacteroidetes,1IP6F@117747|Sphingobacteriia	976|Bacteroidetes	E	Belongs to the agmatine deiminase family	aguA	-	3.5.3.12	ko:K10536	ko00330,ko01100,map00330,map01100	-	R01416	RC00177	ko00000,ko00001,ko01000	-	-	-	PAD_porph
BYD3_k127_20837_38	714943.Mucpa_2691	2.636e-45	170.0	COG0212@1|root,COG0212@2|Bacteria,4NM97@976|Bacteroidetes,1IT2P@117747|Sphingobacteriia	976|Bacteroidetes	H	5-formyltetrahydrofolate cyclo-ligase family	ygfA	-	6.3.3.2	ko:K01934	ko00670,ko01100,map00670,map01100	-	R02301	RC00183	ko00000,ko00001,ko01000	-	-	-	5-FTHF_cyc-lig
BYD3_k127_20837_12	1124780.ANNU01000018_gene1630	4.499e-157	511.0	COG4365@1|root,COG4365@2|Bacteria,4NGCF@976|Bacteroidetes,47JYH@768503|Cytophagia	976|Bacteroidetes	S	Belongs to the BshC family	bshC	-	-	ko:K22136	-	-	-	-	ko00000	-	-	-	BshC
BYD3_k127_20837_4	1279009.ADICEAN_03427	2.071e-215	676.0	COG0621@1|root,COG0621@2|Bacteria,4NEJK@976|Bacteroidetes,47JJ2@768503|Cytophagia	976|Bacteroidetes	J	Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12	rimO	-	2.8.4.4	ko:K14441	-	-	R10652	RC00003,RC03217	ko00000,ko01000,ko03009	-	-	-	Radical_SAM,TRAM,UPF0004
BYD3_k127_20837_35	1237149.C900_01757	2.466e-50	187.0	28JHY@1|root,2Z9BE@2|Bacteria,4NVN1@976|Bacteroidetes,47SUR@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_20837_11	1237149.C900_01754	2.563e-163	519.0	COG0552@1|root,COG0552@2|Bacteria,4NE9Z@976|Bacteroidetes,47JVI@768503|Cytophagia	976|Bacteroidetes	U	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC)	ftsY	-	-	ko:K03110	ko02024,ko03060,ko03070,map02024,map03060,map03070	M00335	-	-	ko00000,ko00001,ko00002,ko02044	3.A.5.1,3.A.5.2,3.A.5.7	-	-	SRP54,SRP54_N
BYD3_k127_20837_47	1237149.C900_01753	2.523e-16	79.0	2E359@1|root,32P2Z@2|Bacteria,4NWAD@976|Bacteroidetes,47SNB@768503|Cytophagia	976|Bacteroidetes	S	Domain of unknown function (DUF4295)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4295
BYD3_k127_20837_45	313606.M23134_07794	9.839e-28	112.0	COG0267@1|root,COG0267@2|Bacteria,4NURM@976|Bacteroidetes,47S6V@768503|Cytophagia	976|Bacteroidetes	J	Belongs to the bacterial ribosomal protein bL33 family	rpmG	-	-	ko:K02913	ko03010,map03010	M00178	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_L33
BYD3_k127_20837_43	1121904.ARBP01000009_gene4183	3.595e-33	130.0	COG0227@1|root,COG0227@2|Bacteria,4NS7Q@976|Bacteroidetes,47R5P@768503|Cytophagia	976|Bacteroidetes	J	Belongs to the bacterial ribosomal protein bL28 family	rpmB	GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904	-	ko:K02902	ko03010,map03010	M00178	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_L28
BYD3_k127_20837_30	1121904.ARBP01000002_gene6990	8.305e-64	227.0	COG0637@1|root,COG0637@2|Bacteria,4NEEH@976|Bacteroidetes,47XKJ@768503|Cytophagia	976|Bacteroidetes	S	HAD-hyrolase-like	pgmB	-	-	-	-	-	-	-	-	-	-	-	HAD_2
BYD3_k127_20837_7	1237149.C900_01735	9.191e-174	570.0	COG2931@1|root,COG2931@2|Bacteria,4NFV5@976|Bacteroidetes,47MFU@768503|Cytophagia	976|Bacteroidetes	Q	Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella	-	-	-	-	-	-	-	-	-	-	-	-	VCBS
BYD3_k127_20837_9	1237149.C900_01734	8.437e-168	537.0	COG0770@1|root,COG0770@2|Bacteria,4NDWD@976|Bacteroidetes,47MCP@768503|Cytophagia	976|Bacteroidetes	M	Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein	murF	-	6.3.2.10	ko:K01929	ko00300,ko00550,ko01100,ko01502,map00300,map00550,map01100,map01502	-	R04573,R04617	RC00064,RC00141	ko00000,ko00001,ko01000,ko01011	-	-	-	Mur_ligase,Mur_ligase_C,Mur_ligase_M
BYD3_k127_20837_15	655815.ZPR_0900	6.623e-149	481.0	COG4030@1|root,COG4030@2|Bacteria,4NHV9@976|Bacteroidetes	976|Bacteroidetes	S	Protein of unknown function (DUF2961)	-	-	-	-	-	-	-	-	-	-	-	-	DUF2961
BYD3_k127_20837_31	313606.M23134_04446	8.646e-58	208.0	COG5587@1|root,COG5587@2|Bacteria,4NNS3@976|Bacteroidetes,47J8W@768503|Cytophagia	976|Bacteroidetes	S	TIGRFAM TIGR02453 family protein	-	-	-	-	-	-	-	-	-	-	-	-	DUF2461
BYD3_k127_20837_48	1122929.KB908222_gene2347	4.038e-07	60.0	COG4251@1|root,COG4251@2|Bacteria,1NSQ1@1224|Proteobacteria	1224|Proteobacteria	T	Histidine kinase	-	-	2.7.13.3	ko:K20974	ko02020,ko02025,map02020,map02025	M00820	-	-	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	-	-	-	HAMP,HATPase_c,HisKA,Hpt,PAS_3,PAS_4,Response_reg,SBP_bac_3,dCache_1
BYD3_k127_20837_29	1237149.C900_01539	1.227e-64	228.0	COG2197@1|root,COG2197@2|Bacteria	2|Bacteria	K	response regulator	-	-	-	ko:K02282	-	-	-	-	ko00000,ko02035,ko02044	-	-	-	GerE,Response_reg
BYD3_k127_20837_46	1178825.ALIH01000005_gene182	1.034e-16	84.0	COG0745@1|root,COG0745@2|Bacteria,4NP5C@976|Bacteroidetes,1I24M@117743|Flavobacteriia	976|Bacteroidetes	T	transcriptional regulator	-	-	-	-	-	-	-	-	-	-	-	-	Response_reg
BYD3_k127_20837_24	63737.Npun_F3797	1.038e-95	337.0	COG2203@1|root,COG4191@1|root,COG5002@1|root,COG2203@2|Bacteria,COG4191@2|Bacteria,COG5002@2|Bacteria,1GPXH@1117|Cyanobacteria,1HUBA@1161|Nostocales	1117|Cyanobacteria	T	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)	-	-	-	-	-	-	-	-	-	-	-	-	CBS,GAF,HATPase_c,HisKA,PAS_4,PAS_9
BYD3_k127_20837_21	929703.KE386492_gene4321	8.951e-104	363.0	COG2202@1|root,COG4251@1|root,COG2202@2|Bacteria,COG4251@2|Bacteria,4NFC3@976|Bacteroidetes,47MXR@768503|Cytophagia	976|Bacteroidetes	T	PAS fold	-	-	-	-	-	-	-	-	-	-	-	-	GAF,GAF_2,HATPase_c,HisKA,PAS,PAS_3,PAS_4,PAS_8,PAS_9
BYD3_k127_20837_19	1121904.ARBP01000004_gene856	8.886e-113	376.0	COG1454@1|root,COG1454@2|Bacteria,4NE5Y@976|Bacteroidetes	976|Bacteroidetes	C	Dehydrogenase	-	-	1.1.1.61	ko:K18120,ko:K19954	ko00650,ko01100,ko01200,map00650,map01100,map01200	-	R01644	RC00087	ko00000,ko00001,ko01000	-	-	-	Fe-ADH
BYD3_k127_20837_41	1173022.Cri9333_2605	3.461e-36	139.0	COG1359@1|root,COG1359@2|Bacteria,1G8H0@1117|Cyanobacteria,1HC7H@1150|Oscillatoriales	1117|Cyanobacteria	S	Antibiotic biosynthesis monooxygenase	-	-	-	-	-	-	-	-	-	-	-	-	ABM
BYD3_k127_20837_17	509635.N824_00860	1.049e-129	424.0	COG2114@1|root,COG2114@2|Bacteria,4NKWT@976|Bacteroidetes,1IV7B@117747|Sphingobacteriia	976|Bacteroidetes	T	Protein of unknown function (DUF2652)	-	-	-	-	-	-	-	-	-	-	-	-	DUF2652
BYD3_k127_20837_25	1237149.C900_03614	7.258e-95	319.0	COG3064@1|root,COG3064@2|Bacteria,4NEVD@976|Bacteroidetes,47KE6@768503|Cytophagia	976|Bacteroidetes	M	TIGRFAM Bacteroidetes-specific	-	-	-	-	-	-	-	-	-	-	-	-	PorP_SprF
BYD3_k127_20837_0	1237149.C900_03613	0.0	2522.0	COG1361@1|root,COG4932@1|root,COG1361@2|Bacteria,COG4932@2|Bacteria,4NN56@976|Bacteroidetes,47Q8D@768503|Cytophagia	976|Bacteroidetes	M	amine dehydrogenase activity	-	-	-	-	-	-	-	-	-	-	-	-	CHU_C,VCBS
BYD3_k127_20837_6	1237149.C900_03612	1.067e-188	624.0	COG3291@1|root,COG3291@2|Bacteria	2|Bacteria	S	metallopeptidase activity	-	-	-	-	-	-	-	-	-	-	-	-	CHU_C,IgGFc_binding,PKD,Peptidase_M43,VCBS,fn3
BYD3_k127_20837_13	991.IW20_22690	1.707e-151	489.0	COG2377@1|root,COG2377@2|Bacteria,4NFZU@976|Bacteroidetes,1HWX7@117743|Flavobacteriia,2NTIS@237|Flavobacterium	976|Bacteroidetes	O	Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling	anmK	-	2.7.1.170	ko:K09001	-	-	-	-	ko00000,ko01000	-	-	-	AnmK
BYD3_k127_20837_14	1123248.KB893330_gene443	4.686e-150	478.0	COG2207@1|root,COG2207@2|Bacteria,4NE6T@976|Bacteroidetes,1IW44@117747|Sphingobacteriia	976|Bacteroidetes	K	Transcriptional regulator, AraC family	-	-	-	-	-	-	-	-	-	-	-	-	HTH_18
BYD3_k127_20837_5	1123248.KB893330_gene442	1.147e-200	626.0	COG5285@1|root,COG5285@2|Bacteria,4NG3B@976|Bacteroidetes,1IRQI@117747|Sphingobacteriia	976|Bacteroidetes	Q	Phytanoyl-CoA dioxygenase (PhyH)	-	-	-	-	-	-	-	-	-	-	-	-	PhyH
BYD3_k127_20837_28	391603.FBALC1_14067	4.061e-72	249.0	2CJWB@1|root,32P4S@2|Bacteria,4NQ5Z@976|Bacteroidetes,1I7H5@117743|Flavobacteriia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	Abi
BYD3_k127_20837_44	1185876.BN8_03015	3.091e-28	117.0	COG3631@1|root,COG3631@2|Bacteria,4NVNP@976|Bacteroidetes,47SCI@768503|Cytophagia	976|Bacteroidetes	S	Ketosteroid isomerase-related protein	-	-	-	-	-	-	-	-	-	-	-	-	SnoaL_2
BYD3_k127_20837_36	1313421.JHBV01000042_gene3351	9.325e-46	172.0	COG1309@1|root,COG1309@2|Bacteria,4NU6H@976|Bacteroidetes	976|Bacteroidetes	K	Bacterial regulatory proteins, tetR family	-	-	-	-	-	-	-	-	-	-	-	-	TetR_N
BYD3_k127_20837_18	1122176.KB903587_gene4543	7.553e-122	402.0	28HAJ@1|root,2Z7MX@2|Bacteria,4NKQQ@976|Bacteroidetes	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_20837_22	1123008.KB905694_gene1576	1.005e-98	328.0	COG1136@1|root,COG1136@2|Bacteria,4NGY1@976|Bacteroidetes,2FRNC@200643|Bacteroidia,23086@171551|Porphyromonadaceae	976|Bacteroidetes	V	AAA domain, putative AbiEii toxin, Type IV TA system	-	-	-	ko:K02003	-	M00258	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	ABC_tran
BYD3_k127_20837_16	1121904.ARBP01000013_gene398	4.885e-141	458.0	COG4591@1|root,COG4591@2|Bacteria,4NKUN@976|Bacteroidetes,47TP5@768503|Cytophagia	976|Bacteroidetes	M	COGs COG4591 ABC-type transport system involved in lipoprotein release permease component	-	-	-	-	-	-	-	-	-	-	-	-	FtsX
BYD3_k127_20837_10	1122176.KB903587_gene4540	6.646e-166	533.0	COG4591@1|root,COG4591@2|Bacteria,4NJRI@976|Bacteroidetes	976|Bacteroidetes	M	COG4591 ABC-type transport system, involved in lipoprotein release, permease component	-	-	-	ko:K02004	-	M00258	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	FtsX,MacB_PCD
BYD3_k127_20837_26	1121904.ARBP01000013_gene400	2.231e-94	314.0	COG2834@1|root,COG2834@2|Bacteria,4NIT5@976|Bacteroidetes,47SW9@768503|Cytophagia	976|Bacteroidetes	M	Outer membrane lipoprotein-sorting protein	-	-	-	-	-	-	-	-	-	-	-	-	LolA_like
BYD3_k127_20837_23	1123276.KB893245_gene1455	2.848e-97	348.0	COG0577@1|root,COG0577@2|Bacteria,4NDUK@976|Bacteroidetes,47NTJ@768503|Cytophagia	976|Bacteroidetes	V	MacB-like periplasmic core domain	-	-	-	ko:K02004	-	M00258	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	FtsX,MacB_PCD
BYD3_k127_20837_33	760192.Halhy_4061	1.827e-52	203.0	COG0577@1|root,COG0577@2|Bacteria,4NDUK@976|Bacteroidetes,1IW4Z@117747|Sphingobacteriia	976|Bacteroidetes	V	MacB-like periplasmic core domain	-	-	-	ko:K02004	-	M00258	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	FtsX,MacB_PCD
BYD3_k127_2088384_5	1237149.C900_03065	1.657e-66	230.0	COG2823@1|root,COG2823@2|Bacteria,4NJ6H@976|Bacteroidetes,47UYC@768503|Cytophagia	976|Bacteroidetes	S	bacterial OsmY and nodulation domain	-	-	-	-	-	-	-	-	-	-	-	-	BON
BYD3_k127_2088384_7	1123248.KB893386_gene1935	3.864e-48	178.0	2C852@1|root,32YB2@2|Bacteria,4NM63@976|Bacteroidetes,1IX0W@117747|Sphingobacteriia	976|Bacteroidetes	S	Domain of unknown function (DUF4136)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4136
BYD3_k127_2088384_8	1237149.C900_04569	9.755e-48	174.0	COG3874@1|root,COG3874@2|Bacteria,4NTIV@976|Bacteroidetes,47VMT@768503|Cytophagia	976|Bacteroidetes	S	Sporulation protein YtfJ (Spore_YtfJ)	-	-	-	-	-	-	-	-	-	-	-	-	Spore_YtfJ
BYD3_k127_2088384_6	1237149.C900_00301	2.459e-54	199.0	COG1926@1|root,COG1926@2|Bacteria	2|Bacteria	Q	phosphoribosyltransferase	prsT	-	-	ko:K07100	-	-	-	-	ko00000	-	-	-	Pribosyltran
BYD3_k127_2088384_1	1237149.C900_00300	4.246e-195	624.0	COG0642@1|root,COG2205@2|Bacteria,4NG0Y@976|Bacteroidetes,47JUV@768503|Cytophagia	976|Bacteroidetes	T	Histidine kinase	-	-	-	-	-	-	-	-	-	-	-	-	HATPase_c,HisKA,PAS,PAS_4,PAS_9
BYD3_k127_2088384_2	1237149.C900_02173	7.931e-174	550.0	COG0664@1|root,COG0745@1|root,COG0664@2|Bacteria,COG0745@2|Bacteria,4NFB1@976|Bacteroidetes,47JY7@768503|Cytophagia	976|Bacteroidetes	K	Transcriptional regulator, Crp Fnr family	crp	-	-	-	-	-	-	-	-	-	-	-	HTH_Crp_2,Response_reg,cNMP_binding
BYD3_k127_2088384_0	1123248.KB893359_gene2201	3.53e-226	711.0	COG0459@1|root,COG0459@2|Bacteria,4NDZM@976|Bacteroidetes,1INP2@117747|Sphingobacteriia	976|Bacteroidetes	O	Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions	groL	GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006457,GO:0006458,GO:0008150,GO:0009987,GO:0016465,GO:0032991,GO:0044183,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0051082,GO:0061077,GO:0101031,GO:1990220	-	ko:K04077	ko03018,ko04212,ko04940,ko05134,ko05152,map03018,map04212,map04940,map05134,map05152	-	-	-	ko00000,ko00001,ko03019,ko03029,ko03110,ko04147	-	-	-	Cpn60_TCP1
BYD3_k127_2088384_9	1237149.C900_02170	1.999e-44	165.0	2CBAQ@1|root,30Y66@2|Bacteria,4PBX7@976|Bacteroidetes,47WGF@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_2088384_4	1237149.C900_00541	1.295e-67	240.0	COG0589@1|root,COG0589@2|Bacteria,4NFZ5@976|Bacteroidetes,47PIA@768503|Cytophagia	976|Bacteroidetes	T	Universal stress protein	-	-	-	-	-	-	-	-	-	-	-	-	Usp
BYD3_k127_2088384_3	1237149.C900_02169	1.318e-68	241.0	COG0589@1|root,COG0589@2|Bacteria,4NFZ5@976|Bacteroidetes,47PIA@768503|Cytophagia	976|Bacteroidetes	T	Universal stress protein	-	-	-	-	-	-	-	-	-	-	-	-	Usp
BYD3_k127_2221738_3	1237149.C900_00878	2.995e-49	180.0	28K10@1|root,2Z9QW@2|Bacteria,4NF8J@976|Bacteroidetes,47KRG@768503|Cytophagia	976|Bacteroidetes	S	Domain of unknown function (DUF4918)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4918
BYD3_k127_2221738_2	1124780.ANNU01000019_gene1723	1.062e-215	687.0	COG0507@1|root,COG1112@1|root,COG0507@2|Bacteria,COG1112@2|Bacteria,4NEK7@976|Bacteroidetes,47MJ9@768503|Cytophagia	976|Bacteroidetes	L	PFAM Type III restriction enzyme, res subunit	-	-	-	-	-	-	-	-	-	-	-	-	AAA_11,AAA_12
BYD3_k127_2221738_0	1237149.C900_04407	1.221e-268	848.0	COG1752@1|root,COG1752@2|Bacteria,4NF97@976|Bacteroidetes,47KND@768503|Cytophagia	976|Bacteroidetes	S	Esterase of the alpha-beta hydrolase superfamily	-	-	-	-	-	-	-	-	-	-	-	-	Patatin
BYD3_k127_2221738_1	1237149.C900_00286	2.522e-237	771.0	COG1074@1|root,COG1074@2|Bacteria,4NEX4@976|Bacteroidetes,47KES@768503|Cytophagia	976|Bacteroidetes	L	Belongs to the helicase family. UvrD subfamily	addA	-	-	-	-	-	-	-	-	-	-	-	Cas_Cas4,PDDEXK_1,UvrD-helicase,UvrD_C
BYD3_k127_226827_13	642492.Clole_1312	2.5e-07	62.0	28K6C@1|root,2Z9UT@2|Bacteria,1VDVW@1239|Firmicutes,24N8N@186801|Clostridia	186801|Clostridia	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_226827_12	1190603.AJYD01000034_gene1989	3.206e-12	76.0	COG3396@1|root,COG3396@2|Bacteria	2|Bacteria	S	phenylacetyl-CoA 1,2-epoxidase activity	-	-	4.1.99.5	ko:K14331	-	-	-	-	ko00000,ko01000	-	-	-	Ald_deCOase,MiaE_2
BYD3_k127_226827_9	574087.Acear_0121	1.812e-35	149.0	COG5322@1|root,COG5322@2|Bacteria,1TSXZ@1239|Firmicutes,24992@186801|Clostridia	186801|Clostridia	S	shikimate quinate 5-dehydrogenase	-	-	-	-	-	-	-	-	-	-	-	-	Shikimate_DH
BYD3_k127_226827_6	1246626.BleG1_0522	1.397e-48	189.0	COG5379@1|root,COG5379@2|Bacteria,1UQAT@1239|Firmicutes,4IFGJ@91061|Bacilli,1ZHWE@1386|Bacillus	91061|Bacilli	I	Protein of unknown function (DUF3419)	-	-	-	ko:K13622	ko00564,map00564	-	R09072	RC00021,RC01091	ko00000,ko00001	-	-	-	DUF3419
BYD3_k127_226827_7	1242864.D187_002907	7.411e-46	177.0	COG3239@1|root,COG3239@2|Bacteria,1R3Y2@1224|Proteobacteria,434KY@68525|delta/epsilon subdivisions,2WYYD@28221|Deltaproteobacteria,2Z0X8@29|Myxococcales	28221|Deltaproteobacteria	I	Fatty acid desaturase	-	-	-	-	-	-	-	-	-	-	-	-	FA_desaturase
BYD3_k127_226827_5	485918.Cpin_3659	1.823e-54	198.0	2DP10@1|root,3302V@2|Bacteria,4PMCJ@976|Bacteroidetes,1J0N4@117747|Sphingobacteriia	976|Bacteroidetes	S	START domain	-	-	-	-	-	-	-	-	-	-	-	-	START
BYD3_k127_226827_2	926549.KI421517_gene3138	4.582e-200	631.0	COG2271@1|root,COG2271@2|Bacteria,4NE7R@976|Bacteroidetes,47JBJ@768503|Cytophagia	976|Bacteroidetes	G	PFAM Major Facilitator Superfamily	-	-	-	ko:K08191	-	-	-	-	ko00000,ko02000	2.A.1.14.2	-	-	MFS_1
BYD3_k127_226827_1	1185876.BN8_06599	3.053e-223	696.0	COG4948@1|root,COG4948@2|Bacteria,4NEPP@976|Bacteroidetes,47M8J@768503|Cytophagia	976|Bacteroidetes	M	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain	-	-	4.2.1.6	ko:K01684	ko00052,ko01100,ko01120,map00052,map01100,map01120	M00552	R03033	RC00543	ko00000,ko00001,ko00002,ko01000	-	-	-	MR_MLE_C,MR_MLE_N
BYD3_k127_226827_8	880073.Calab_3016	1.446e-40	153.0	COG0614@1|root,COG0614@2|Bacteria,2NRKR@2323|unclassified Bacteria	2|Bacteria	P	PD-(D/E)XK nuclease superfamily	-	-	-	-	-	-	-	-	-	-	-	-	PDDEXK_3
BYD3_k127_226827_0	700598.Niako_4909	0.0	1131.0	COG0577@1|root,COG0577@2|Bacteria,4NDUK@976|Bacteroidetes,1INWS@117747|Sphingobacteriia	976|Bacteroidetes	V	InterPro IPR003838	-	-	-	-	-	-	-	-	-	-	-	-	FtsX,MacB_PCD
BYD3_k127_226827_3	487796.Flav2ADRAFT_1249	3.549e-78	275.0	28M5H@1|root,2ZAJ9@2|Bacteria,4NESS@976|Bacteroidetes,1HZDQ@117743|Flavobacteriia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_226827_4	487796.Flav2ADRAFT_1249	2.548e-72	256.0	28M5H@1|root,2ZAJ9@2|Bacteria,4NESS@976|Bacteroidetes,1HZDQ@117743|Flavobacteriia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_226827_10	487796.Flav2ADRAFT_1248	2.142e-27	123.0	28KF8@1|root,2ZA1G@2|Bacteria,4NK7X@976|Bacteroidetes,1I0C7@117743|Flavobacteriia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_226827_11	411477.PARMER_02871	6.934e-27	110.0	COG0330@1|root,COG0330@2|Bacteria,4NH8V@976|Bacteroidetes,2FQPC@200643|Bacteroidia,22Z0Q@171551|Porphyromonadaceae	976|Bacteroidetes	O	SPFH Band 7 PHB domain protein	-	-	-	-	-	-	-	-	-	-	-	-	Band_7
BYD3_k127_2298394_77	1279009.ADICEAN_00177	1.858e-51	183.0	COG1024@1|root,COG1250@1|root,COG1024@2|Bacteria,COG1250@2|Bacteria,4NF9D@976|Bacteroidetes,47ME4@768503|Cytophagia	976|Bacteroidetes	I	3-hydroxyacyl-CoA dehydrogenase	fadN	-	1.1.1.35	ko:K07516	ko00071,ko00362,ko00650,ko01100,ko01120,ko01200,ko01212,map00071,map00362,map00650,map01100,map01120,map01200,map01212	M00087	R01975,R04737,R04739,R04741,R04743,R04745,R04748,R05305	RC00029,RC00117	ko00000,ko00001,ko00002,ko01000	-	-	-	3HCDH,3HCDH_N,ECH_1
BYD3_k127_2298394_17	1237149.C900_04650	4.206e-184	582.0	COG0183@1|root,COG0183@2|Bacteria,4NE3Q@976|Bacteroidetes,47JQD@768503|Cytophagia	976|Bacteroidetes	I	Belongs to the thiolase family	fadA	-	2.3.1.16	ko:K00632	ko00071,ko00280,ko00281,ko00362,ko00592,ko00642,ko01100,ko01110,ko01120,ko01130,ko01212,map00071,map00280,map00281,map00362,map00592,map00642,map01100,map01110,map01120,map01130,map01212	M00087,M00113	R00829,R00927,R01177,R03778,R03858,R03991,R04546,R04742,R04747,R05506,R05586,R07891,R07895,R07899,R08091,R08095	RC00004,RC00326,RC00405,RC01702,RC02728,RC02898,RC02955	ko00000,ko00001,ko00002,ko01000	-	-	-	Thiolase_C,Thiolase_N
BYD3_k127_2298394_4	1237149.C900_04649	2.551e-298	923.0	COG1960@1|root,COG1960@2|Bacteria,4NG2G@976|Bacteroidetes,47KH2@768503|Cytophagia	976|Bacteroidetes	I	acyl-CoA dehydrogenase	-	-	-	-	-	-	-	-	-	-	-	-	Acyl-CoA_dh_1,Acyl-CoA_dh_M,Acyl-CoA_dh_N
BYD3_k127_2298394_64	1237149.C900_03186	8.726e-74	253.0	COG0526@1|root,COG0526@2|Bacteria,4PKPR@976|Bacteroidetes,47PBI@768503|Cytophagia	976|Bacteroidetes	CO	Redoxin	-	-	-	-	-	-	-	-	-	-	-	-	AhpC-TSA
BYD3_k127_2298394_79	1237149.C900_03187	4.17e-49	181.0	COG0526@1|root,COG0526@2|Bacteria,4NQ9U@976|Bacteroidetes,47RGU@768503|Cytophagia	976|Bacteroidetes	CO	Thioredoxin	trxC	-	-	-	-	-	-	-	-	-	-	-	AhpC-TSA,Thioredoxin,Thioredoxin_8
BYD3_k127_2298394_34	1237149.C900_03189	8.046e-139	447.0	COG2070@1|root,COG2070@2|Bacteria,4NF8Z@976|Bacteroidetes,47MJV@768503|Cytophagia	976|Bacteroidetes	S	Nitronate monooxygenase	fabK	-	1.3.1.9	ko:K02371	ko00061,ko01100,ko01212,map00061,map01100,map01212	M00083	R04429,R04724,R04955,R04958,R04961,R04966,R04969,R07765	RC00052,RC00076	ko00000,ko00001,ko00002,ko01000,ko01004	-	-	-	NMO
BYD3_k127_2298394_80	1237149.C900_03190	1.345e-48	177.0	COG0346@1|root,COG0346@2|Bacteria,4NRSZ@976|Bacteroidetes,47QSC@768503|Cytophagia	976|Bacteroidetes	E	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily	-	-	-	-	-	-	-	-	-	-	-	-	Glyoxalase
BYD3_k127_2298394_2	1237149.C900_04535	6.1e-322	997.0	COG1200@1|root,COG1200@2|Bacteria,4NDZV@976|Bacteroidetes,47JUE@768503|Cytophagia	976|Bacteroidetes	L	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)	recG	-	3.6.4.12	ko:K03655	ko03440,map03440	-	-	-	ko00000,ko00001,ko01000,ko03400	-	-	-	DEAD,Helicase_C,RecG_wedge
BYD3_k127_2298394_57	1237149.C900_01523	1.322e-79	273.0	28IIU@1|root,2Z8JV@2|Bacteria,4NEFH@976|Bacteroidetes,47JU3@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_2298394_69	1237149.C900_03184	7.235e-63	220.0	COG2318@1|root,COG2318@2|Bacteria,4NQBY@976|Bacteroidetes,47PR7@768503|Cytophagia	976|Bacteroidetes	S	DinB superfamily	-	-	-	-	-	-	-	-	-	-	-	-	DinB_2
BYD3_k127_2298394_39	1123234.AUKI01000019_gene365	2.445e-126	418.0	COG2027@1|root,COG2027@2|Bacteria,4NGIQ@976|Bacteroidetes,1HY7E@117743|Flavobacteriia	976|Bacteroidetes	M	D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4)	dacB	-	3.4.16.4	ko:K07259	ko00550,map00550	-	-	-	ko00000,ko00001,ko01000,ko01002,ko01011	-	-	-	Peptidase_S13
BYD3_k127_2298394_38	1237149.C900_03182	4.306e-128	421.0	COG1472@1|root,COG1472@2|Bacteria,4NET8@976|Bacteroidetes,47P5P@768503|Cytophagia	976|Bacteroidetes	G	Glycosyl hydrolase family 3 N terminal domain	-	-	3.2.1.52	ko:K01207	ko00520,ko00531,ko01100,ko01501,map00520,map00531,map01100,map01501	M00628	R00022,R05963,R07809,R07810,R10831	RC00049	ko00000,ko00001,ko00002,ko01000	-	-	-	Glyco_hydro_3
BYD3_k127_2298394_6	929562.Emtol_2528	5.949e-295	924.0	COG0823@1|root,COG1506@1|root,COG0823@2|Bacteria,COG1506@2|Bacteria,4NF70@976|Bacteroidetes,47JEZ@768503|Cytophagia	976|Bacteroidetes	EU	Peptidase S9, prolyl oligopeptidase active site domain protein	-	-	-	-	-	-	-	-	-	-	-	-	DPPIV_N,PD40,Peptidase_S9
BYD3_k127_2298394_40	1123248.KB893370_gene5028	1.155e-121	396.0	COG1082@1|root,COG1082@2|Bacteria,4NJ3Z@976|Bacteroidetes	976|Bacteroidetes	G	Xylose isomerase	-	-	-	-	-	-	-	-	-	-	-	-	AP_endonuc_2
BYD3_k127_2298394_18	1237149.C900_04632	3.18e-182	579.0	COG1473@1|root,COG1473@2|Bacteria,4NGBI@976|Bacteroidetes,47JXE@768503|Cytophagia	976|Bacteroidetes	S	PFAM Peptidase family M20 M25 M40	-	-	-	ko:K01436	-	-	-	-	ko00000,ko01000,ko01002	-	-	-	M20_dimer,Peptidase_M20
BYD3_k127_2298394_78	1237149.C900_04644	6.255e-51	194.0	2BYCP@1|root,2ZAHR@2|Bacteria,4NJ23@976|Bacteroidetes,47NMK@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_2298394_46	269798.CHU_1766	1.088e-110	369.0	COG4335@1|root,COG4335@2|Bacteria,4NH5H@976|Bacteroidetes,47MI7@768503|Cytophagia	976|Bacteroidetes	L	DNA alkylation repair	-	-	-	-	-	-	-	-	-	-	-	-	DNA_alkylation,HEAT
BYD3_k127_2298394_16	1454007.JAUG01000014_gene1800	1.503e-185	587.0	COG1415@1|root,COG1415@2|Bacteria,4NG24@976|Bacteroidetes,1IR2S@117747|Sphingobacteriia	976|Bacteroidetes	S	Protein of unknown function (DUF763)	-	-	-	ko:K09003	-	-	-	-	ko00000	-	-	-	DUF763
BYD3_k127_2298394_73	504472.Slin_3605	5.465e-56	203.0	2A087@1|root,30NBF@2|Bacteria,4NMD0@976|Bacteroidetes,47P70@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_2298394_53	272134.KB731326_gene351	3.805e-93	314.0	COG0451@1|root,COG0451@2|Bacteria,1G3KY@1117|Cyanobacteria,1HBRG@1150|Oscillatoriales	1117|Cyanobacteria	GM	NAD dependent epimerase dehydratase family	-	-	1.1.1.339	ko:K19180	ko00523,ko01130,map00523,map01130	-	R10190	RC00182	ko00000,ko00001,ko01000	-	-	-	Epimerase
BYD3_k127_2298394_26	251229.Chro_0226	4.034e-154	497.0	COG4310@1|root,COG4310@2|Bacteria,1G39N@1117|Cyanobacteria	1117|Cyanobacteria	M	Domain of unknown function (DUF4910)	-	-	-	-	-	-	-	-	-	-	-	-	DUF2172,DUF4910,HTH_47
BYD3_k127_2298394_9	1237149.C900_02063	3.14e-240	766.0	COG2203@1|root,COG2203@2|Bacteria,4NE84@976|Bacteroidetes,47K2E@768503|Cytophagia	976|Bacteroidetes	T	Gaf domain	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_2298394_67	1237149.C900_05169	1.159e-67	238.0	COG3548@1|root,COG3548@2|Bacteria,4NW8Z@976|Bacteroidetes,47V92@768503|Cytophagia	976|Bacteroidetes	S	Protein of unknown function (DUF1211)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1211
BYD3_k127_2298394_68	313598.MED152_12649	1.771e-67	236.0	COG2339@1|root,COG2339@2|Bacteria,4NGUS@976|Bacteroidetes,1HY3J@117743|Flavobacteriia,3VVQ8@52959|Polaribacter	976|Bacteroidetes	S	Protease prsW family	-	-	-	-	-	-	-	-	-	-	-	-	PrsW-protease
BYD3_k127_2298394_62	1237149.C900_00826	2.606e-75	257.0	2DZGZ@1|root,32VAD@2|Bacteria,4NSFP@976|Bacteroidetes,47RS7@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	ATP-synt_10
BYD3_k127_2298394_74	1237149.C900_00981	4.049e-55	201.0	COG2227@1|root,COG2227@2|Bacteria,4P2YS@976|Bacteroidetes,47UM5@768503|Cytophagia	976|Bacteroidetes	H	Tellurite resistance protein TehB	-	-	-	-	-	-	-	-	-	-	-	-	Methyltransf_25
BYD3_k127_2298394_65	1124780.ANNU01000006_gene2845	2.357e-73	251.0	COG0778@1|root,COG0778@2|Bacteria,4NMUE@976|Bacteroidetes,47PFV@768503|Cytophagia	976|Bacteroidetes	C	Nitroreductase family	ydjA	-	-	-	-	-	-	-	-	-	-	-	Nitroreductase
BYD3_k127_2298394_100	1550091.JROE01000002_gene936	4.36e-11	72.0	2C2QD@1|root,2ZW7X@2|Bacteria,4NPHF@976|Bacteroidetes,1ISNA@117747|Sphingobacteriia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_2298394_21	1317122.ATO12_03825	6.618e-174	551.0	COG2159@1|root,COG2159@2|Bacteria,4NG9U@976|Bacteroidetes,1HYFP@117743|Flavobacteriia,2YIVD@290174|Aquimarina	976|Bacteroidetes	S	Amidohydrolase	-	-	-	-	-	-	-	-	-	-	-	-	Amidohydro_2
BYD3_k127_2298394_36	1237149.C900_03167	1.58e-132	432.0	COG0457@1|root,COG0457@2|Bacteria,4NGGZ@976|Bacteroidetes,47JWQ@768503|Cytophagia	976|Bacteroidetes	S	TPR repeat-containing protein	-	-	-	-	-	-	-	-	-	-	-	-	TPR_1,TPR_11,TPR_16,TPR_2,TPR_6,TPR_8
BYD3_k127_2298394_88	1237149.C900_03160	1.218e-38	149.0	COG1714@1|root,COG1714@2|Bacteria,4NW7J@976|Bacteroidetes,47X24@768503|Cytophagia	976|Bacteroidetes	S	RDD family	-	-	-	-	-	-	-	-	-	-	-	-	RDD
BYD3_k127_2298394_3	1237149.C900_03155	3.323e-320	1002.0	COG2866@1|root,COG2866@2|Bacteria,4NEJA@976|Bacteroidetes,47KZ0@768503|Cytophagia	976|Bacteroidetes	E	PFAM Zinc carboxypeptidase	-	-	-	-	-	-	-	-	-	-	-	-	Peptidase_M14
BYD3_k127_2298394_83	376686.Fjoh_3583	3.71e-41	161.0	2E945@1|root,333D0@2|Bacteria,4NVPT@976|Bacteroidetes,1IBY3@117743|Flavobacteriia,2NXH3@237|Flavobacterium	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_2298394_84	1121373.KB903620_gene2169	4.555e-41	156.0	COG2137@1|root,COG2137@2|Bacteria,4NSAS@976|Bacteroidetes,47QBK@768503|Cytophagia	976|Bacteroidetes	S	Modulates RecA activity	recX	-	-	ko:K03565	-	-	-	-	ko00000,ko03400	-	-	-	RecX
BYD3_k127_2298394_70	1237149.C900_04494	5.65e-58	205.0	2C88U@1|root,2ZAHP@2|Bacteria,4NK63@976|Bacteroidetes,47NBI@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	YcxB
BYD3_k127_2298394_42	1237149.C900_04493	3.159e-114	375.0	COG0157@1|root,COG0157@2|Bacteria,4NDXF@976|Bacteroidetes,47JJ8@768503|Cytophagia	976|Bacteroidetes	H	Belongs to the NadC ModD family	nadC	-	2.4.2.19	ko:K00767	ko00760,ko01100,map00760,map01100	M00115	R03348	RC02877	ko00000,ko00001,ko00002,ko01000	-	-	-	QRPTase_C,QRPTase_N
BYD3_k127_2298394_87	1237149.C900_04492	1.723e-39	157.0	2E4SF@1|root,32ZKW@2|Bacteria,4NV4G@976|Bacteroidetes,47RXS@768503|Cytophagia	976|Bacteroidetes	S	Domain of unknown function (DUF4783)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4783
BYD3_k127_2298394_8	1237149.C900_04626	1.404e-243	762.0	COG0696@1|root,COG0696@2|Bacteria,4NEQT@976|Bacteroidetes,47K1F@768503|Cytophagia	976|Bacteroidetes	G	Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate	gpmI	-	5.4.2.12	ko:K15633	ko00010,ko00260,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00260,map00680,map01100,map01110,map01120,map01130,map01200,map01230	M00001,M00002,M00003	R01518	RC00536	ko00000,ko00001,ko00002,ko01000	-	-	-	Metalloenzyme,Phosphodiest,iPGM_N
BYD3_k127_2298394_10	1237149.C900_04623	1.633e-237	747.0	COG1132@1|root,COG1132@2|Bacteria,4PKCT@976|Bacteroidetes,47M5S@768503|Cytophagia	976|Bacteroidetes	V	ABC-type multidrug transport system ATPase and permease	-	-	-	ko:K11085	ko02010,map02010	-	-	-	ko00000,ko00001,ko01000,ko02000	3.A.1.106	-	-	ABC_membrane,ABC_tran
BYD3_k127_2298394_76	1123277.KB893219_gene6196	2.941e-53	190.0	COG0735@1|root,COG0735@2|Bacteria,4NSES@976|Bacteroidetes,47PU3@768503|Cytophagia	976|Bacteroidetes	P	Belongs to the Fur family	zur	-	-	ko:K03711	-	-	-	-	ko00000,ko03000	-	-	-	FUR
BYD3_k127_2298394_35	1237149.C900_04621	1.411e-132	430.0	COG0861@1|root,COG0861@2|Bacteria,4NH7P@976|Bacteroidetes,47N45@768503|Cytophagia	976|Bacteroidetes	P	PFAM Integral membrane protein TerC	ygjT	-	-	ko:K05794	-	-	-	-	ko00000	-	-	-	TerC
BYD3_k127_2298394_66	1237149.C900_04619	5.468e-71	243.0	COG0041@1|root,COG0041@2|Bacteria,4NME9@976|Bacteroidetes,47PQS@768503|Cytophagia	976|Bacteroidetes	F	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)	purE	-	5.4.99.18	ko:K01588	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	M00048	R07405	RC01947	ko00000,ko00001,ko00002,ko01000	-	-	-	AIRC
BYD3_k127_2298394_25	1237149.C900_04618	5.304e-163	521.0	COG0026@1|root,COG0026@2|Bacteria,4NEGE@976|Bacteroidetes,47JH8@768503|Cytophagia	976|Bacteroidetes	F	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)	purK	-	6.3.4.18	ko:K01589	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	M00048	R07404	RC01927	ko00000,ko00001,ko00002,ko01000	-	-	-	ATP-grasp
BYD3_k127_2298394_33	1237149.C900_04617	4.331e-139	465.0	COG0652@1|root,COG1413@1|root,COG0652@2|Bacteria,COG1413@2|Bacteria,4PM5K@976|Bacteroidetes,47MDR@768503|Cytophagia	976|Bacteroidetes	M	Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD	-	-	5.2.1.8	ko:K03768	-	-	-	-	ko00000,ko01000,ko03110	-	-	-	HEAT,HEAT_2,Pro_isomerase
BYD3_k127_2298394_7	1237149.C900_03447	1.328e-278	872.0	COG0370@1|root,COG0370@2|Bacteria,4NEII@976|Bacteroidetes,47JEQ@768503|Cytophagia	976|Bacteroidetes	P	transporter of a GTP-driven Fe(2 ) uptake system	feoB	-	-	ko:K04759	-	-	-	-	ko00000,ko02000	9.A.8.1	-	-	FeoA,FeoB_C,FeoB_N,Gate
BYD3_k127_2298394_93	1237149.C900_03448	6.039e-27	111.0	COG1918@1|root,COG1918@2|Bacteria,4NUWI@976|Bacteroidetes,47RUN@768503|Cytophagia	976|Bacteroidetes	P	FeoA	feoA	-	-	ko:K04758	-	-	-	-	ko00000,ko02000	-	-	-	FeoA
BYD3_k127_2298394_5	1237149.C900_00798	1.717e-296	931.0	COG0770@1|root,COG0787@1|root,COG0770@2|Bacteria,COG0787@2|Bacteria,4NEXM@976|Bacteroidetes,47JKP@768503|Cytophagia	976|Bacteroidetes	M	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids	alr	-	5.1.1.1,6.3.2.10	ko:K01775,ko:K01929	ko00300,ko00473,ko00550,ko01100,ko01502,map00300,map00473,map00550,map01100,map01502	-	R00401,R04573,R04617	RC00064,RC00141,RC00285	ko00000,ko00001,ko01000,ko01011	-	-	-	Ala_racemase_C,Ala_racemase_N,Mur_ligase,Mur_ligase_M
BYD3_k127_2298394_82	1128421.JAGA01000003_gene3410	1.139e-41	159.0	COG0073@1|root,COG0073@2|Bacteria,2NPKM@2323|unclassified Bacteria	2|Bacteria	J	Putative tRNA binding domain	csaA	GO:0000049,GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0017101,GO:0017102,GO:0019538,GO:0019752,GO:0032991,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576	6.1.1.10,6.1.1.20,6.1.1.6	ko:K01874,ko:K01890,ko:K04566,ko:K06878	ko00450,ko00970,map00450,map00970	M00359,M00360	R03658,R03659,R03660,R04773	RC00055,RC00523	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	-	-	-	tRNA_bind
BYD3_k127_2298394_43	1237149.C900_00804	2.561e-113	369.0	COG0106@1|root,COG0106@2|Bacteria,4NK0E@976|Bacteroidetes,47NT9@768503|Cytophagia	976|Bacteroidetes	E	1-(5-phosphoribosyl)-5- (5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase	-	-	5.3.1.16	ko:K01814	ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230	M00026	R04640	RC00945	ko00000,ko00001,ko00002,ko01000	-	-	-	His_biosynth
BYD3_k127_2298394_44	1237149.C900_03498	3.405e-112	381.0	COG2885@1|root,COG2885@2|Bacteria,4NJB2@976|Bacteroidetes,47K81@768503|Cytophagia	976|Bacteroidetes	MU	OmpA family	-	-	-	-	-	-	-	-	-	-	-	-	PD40
BYD3_k127_2298394_72	1237149.C900_03497	3.344e-57	204.0	COG0457@1|root,COG0457@2|Bacteria,4NRIH@976|Bacteroidetes,47QEH@768503|Cytophagia	976|Bacteroidetes	S	Protein of unknown function (DUF2911)	-	-	-	-	-	-	-	-	-	-	-	-	DUF2911
BYD3_k127_2298394_45	1237149.C900_03492	1.19e-111	373.0	COG0793@1|root,COG0793@2|Bacteria,4NEF4@976|Bacteroidetes,47K87@768503|Cytophagia	976|Bacteroidetes	M	PDZ DHR GLGF domain protein	-	-	-	-	-	-	-	-	-	-	-	-	Asp_protease_2,PDZ,PDZ_2
BYD3_k127_2298394_91	1237149.C900_03491	1.271e-31	129.0	COG2197@1|root,COG2197@2|Bacteria	2|Bacteria	K	response regulator	-	-	-	-	-	-	-	-	-	-	-	-	DUF2087,GerE,Mor,Response_reg,Y_Y_Y
BYD3_k127_2298394_37	1237149.C900_03489	1.191e-128	421.0	COG0644@1|root,COG0644@2|Bacteria,4NE67@976|Bacteroidetes,47M1U@768503|Cytophagia	976|Bacteroidetes	C	FAD binding domain	fixC	-	-	-	-	-	-	-	-	-	-	-	FAD_binding_3,Lycopene_cycl,SE,Trp_halogenase
BYD3_k127_2298394_97	700598.Niako_3128	1.928e-20	94.0	2EIK5@1|root,33CBF@2|Bacteria	2|Bacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_2298394_49	1237149.C900_01545	3.553e-109	361.0	COG0382@1|root,COG0382@2|Bacteria,4NK26@976|Bacteroidetes,47N2W@768503|Cytophagia	976|Bacteroidetes	H	UbiA prenyltransferase family	-	-	2.5.1.74	ko:K02548	ko00130,ko01100,ko01110,map00130,map01100,map01110	M00116	R05617,R06858,R10757	RC02935,RC02936,RC03264	ko00000,ko00001,ko00002,ko01000,ko01006	-	-	-	UbiA
BYD3_k127_2298394_41	1124780.ANNU01000006_gene2848	9.557e-121	397.0	COG3424@1|root,COG3424@2|Bacteria,4NDZU@976|Bacteroidetes,47JU1@768503|Cytophagia	976|Bacteroidetes	Q	PFAM chalcone and stilbene	bcsA	-	-	-	-	-	-	-	-	-	-	-	Chal_sti_synt_C,Chal_sti_synt_N
BYD3_k127_2298394_59	1237149.C900_01543	6.871e-78	267.0	COG0500@1|root,COG2226@2|Bacteria,4NM9E@976|Bacteroidetes,47PMX@768503|Cytophagia	976|Bacteroidetes	Q	Methyltransferase	-	-	-	-	-	-	-	-	-	-	-	-	Methyltransf_25,Methyltransf_31
BYD3_k127_2298394_96	1453500.AT05_08105	4.308e-22	104.0	2CC29@1|root,32RUM@2|Bacteria,4NS83@976|Bacteroidetes	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_2298394_51	926549.KI421517_gene3893	6.925e-97	326.0	COG0598@1|root,COG0598@2|Bacteria,4NG3C@976|Bacteroidetes,47MH8@768503|Cytophagia	976|Bacteroidetes	P	Mediates influx of magnesium ions	corA	-	-	ko:K03284	-	-	-	-	ko00000,ko02000	1.A.35.1,1.A.35.3	-	-	CorA
BYD3_k127_2298394_55	1305737.JAFX01000001_gene900	7.547e-87	291.0	COG1428@1|root,COG1428@2|Bacteria,4NFA8@976|Bacteroidetes,47P9Q@768503|Cytophagia	976|Bacteroidetes	F	deoxynucleoside kinase	dck	-	-	-	-	-	-	-	-	-	-	-	dNK
BYD3_k127_2298394_71	1237149.C900_03196	1.019e-57	208.0	COG2350@1|root,COG2350@2|Bacteria	2|Bacteria	S	YCII-related domain	-	-	-	-	-	-	-	-	-	-	-	-	YCII
BYD3_k127_2298394_56	1121957.ATVL01000007_gene2026	6.722e-86	293.0	COG0697@1|root,COG0697@2|Bacteria,4NGPQ@976|Bacteroidetes,47P5U@768503|Cytophagia	976|Bacteroidetes	EG	EamA-like transporter family	-	-	-	-	-	-	-	-	-	-	-	-	EamA
BYD3_k127_2298394_98	309803.CTN_1804	5.256e-20	91.0	2DNS1@1|root,32YVX@2|Bacteria	2|Bacteria	S	Protein of unknown function (DUF2905)	yrzS	-	-	-	-	-	-	-	-	-	-	-	DUF2905
BYD3_k127_2298394_63	1189612.A33Q_4372	5.323e-74	255.0	COG0313@1|root,COG0313@2|Bacteria,4NDXE@976|Bacteroidetes,47N4G@768503|Cytophagia	976|Bacteroidetes	H	PFAM Tetrapyrrole (Corrin Porphyrin) Methylases	rsmI_1	-	2.1.1.198	ko:K07056	-	-	-	-	ko00000,ko01000,ko03009	-	-	-	TP_methylase
BYD3_k127_2298394_13	485918.Cpin_3691	3.563e-215	673.0	COG0192@1|root,COG0192@2|Bacteria,4NG7Y@976|Bacteroidetes,1INXM@117747|Sphingobacteriia	976|Bacteroidetes	H	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme	metK	GO:0003674,GO:0003824,GO:0004478,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0016740,GO:0016765,GO:0044424,GO:0044444,GO:0044464	2.5.1.6	ko:K00789	ko00270,ko01100,ko01110,ko01230,map00270,map01100,map01110,map01230	M00034,M00035,M00368,M00609	R00177,R04771	RC00021,RC01211	ko00000,ko00001,ko00002,ko01000	-	-	-	S-AdoMet_synt_C,S-AdoMet_synt_M,S-AdoMet_synt_N
BYD3_k127_2298394_85	1237149.C900_03507	5.918e-41	153.0	COG1544@1|root,COG1544@2|Bacteria,4NUME@976|Bacteroidetes,47RC7@768503|Cytophagia	976|Bacteroidetes	J	PFAM Sigma 54 modulation protein S30EA ribosomal protein	raiA	-	-	ko:K05808	-	-	-	-	ko00000,ko03009	-	-	-	Ribosomal_S30AE
BYD3_k127_2298394_50	1237149.C900_03508	3.917e-106	352.0	COG4974@1|root,COG4974@2|Bacteria,4NGQW@976|Bacteroidetes,47JJY@768503|Cytophagia	976|Bacteroidetes	L	Belongs to the 'phage' integrase family	xerC	-	-	ko:K03733	-	-	-	-	ko00000,ko03036	-	-	-	Phage_int_SAM_1,Phage_integrase
BYD3_k127_2298394_95	1237149.C900_03509	3.519e-22	96.0	COG0828@1|root,COG0828@2|Bacteria,4NUPV@976|Bacteroidetes,47RU4@768503|Cytophagia	976|Bacteroidetes	J	Belongs to the bacterial ribosomal protein bS21 family	rpsU	-	-	ko:K02970	ko03010,map03010	M00178	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_S21
BYD3_k127_2298394_15	1237149.C900_03511	2.694e-195	616.0	COG1960@1|root,COG1960@2|Bacteria,4NEHA@976|Bacteroidetes,47K4J@768503|Cytophagia	976|Bacteroidetes	I	acyl-CoA dehydrogenase	acdA	-	-	-	-	-	-	-	-	-	-	-	Acyl-CoA_dh_1,Acyl-CoA_dh_M,Acyl-CoA_dh_N
BYD3_k127_2298394_11	1124780.ANNU01000005_gene2370	1.922e-226	707.0	COG1004@1|root,COG1004@2|Bacteria,4NE00@976|Bacteroidetes,47KAG@768503|Cytophagia	976|Bacteroidetes	M	Belongs to the UDP-glucose GDP-mannose dehydrogenase family	tuaD	-	1.1.1.22	ko:K00012	ko00040,ko00053,ko00520,ko01100,map00040,map00053,map00520,map01100	M00014,M00129,M00361,M00362	R00286	RC00291	ko00000,ko00001,ko00002,ko01000	-	-	-	UDPG_MGDP_dh,UDPG_MGDP_dh_C,UDPG_MGDP_dh_N
BYD3_k127_2298394_19	929562.Emtol_1005	3.555e-181	571.0	COG0451@1|root,COG0451@2|Bacteria,4NEZX@976|Bacteroidetes,47JU8@768503|Cytophagia	976|Bacteroidetes	GM	PFAM NAD dependent epimerase dehydratase family	-	-	4.1.1.35,4.2.1.46	ko:K01710,ko:K08678	ko00520,ko00521,ko00523,ko00525,ko01055,ko01100,ko01130,map00520,map00521,map00523,map00525,map01055,map01100,map01130	M00361,M00793	R01384,R06513	RC00402,RC00508	ko00000,ko00001,ko00002,ko01000	-	-	-	GDP_Man_Dehyd
BYD3_k127_2298394_24	643867.Ftrac_2490	4.196e-168	533.0	COG1088@1|root,COG1088@2|Bacteria,4NE9V@976|Bacteroidetes,47K3S@768503|Cytophagia	976|Bacteroidetes	M	Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily	rfbB	-	4.2.1.46	ko:K01710	ko00521,ko00523,ko00525,ko01055,ko01130,map00521,map00523,map00525,map01055,map01130	M00793	R06513	RC00402	ko00000,ko00001,ko00002,ko01000	-	-	-	GDP_Man_Dehyd
BYD3_k127_2298394_30	1121481.AUAS01000022_gene5282	1.573e-143	459.0	COG1209@1|root,COG1209@2|Bacteria,4NE1U@976|Bacteroidetes,47JPC@768503|Cytophagia	976|Bacteroidetes	M	Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis	rfbA	-	2.7.7.24	ko:K00973	ko00521,ko00523,ko00525,ko01130,map00521,map00523,map00525,map01130	M00793	R02328	RC00002	ko00000,ko00001,ko00002,ko01000	-	-	-	NTP_transferase
BYD3_k127_2298394_89	1237149.C900_01778	4.443e-34	136.0	COG0779@1|root,COG0779@2|Bacteria,4NQ32@976|Bacteroidetes,47R9C@768503|Cytophagia	976|Bacteroidetes	S	Required for maturation of 30S ribosomal subunits	rimP	GO:0000028,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:1901564,GO:1901566,GO:1901576	-	ko:K09748	-	-	-	-	ko00000,ko03009	-	-	-	DUF150,DUF150_C
BYD3_k127_2298394_12	1237149.C900_01779	1.909e-221	691.0	COG0195@1|root,COG0195@2|Bacteria,4NFGA@976|Bacteroidetes,47KFI@768503|Cytophagia	976|Bacteroidetes	K	Participates in both transcription termination and antitermination	nusA	-	-	ko:K02600	-	-	-	-	ko00000,ko03009,ko03021	-	-	-	KH_5,NusA_N,S1
BYD3_k127_2298394_1	1237149.C900_01780	0.0	1198.0	COG0532@1|root,COG0532@2|Bacteria,4NGP3@976|Bacteroidetes,47KGB@768503|Cytophagia	976|Bacteroidetes	J	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex	infB	-	-	ko:K02519	-	-	-	-	ko00000,ko03012,ko03029	-	-	-	GTP_EFTU,GTP_EFTU_D2,IF-2,IF2_N
BYD3_k127_2298394_61	1237149.C900_00796	1.214e-75	258.0	COG1704@1|root,COG1704@2|Bacteria,4NMD3@976|Bacteroidetes,47JGT@768503|Cytophagia	976|Bacteroidetes	S	PFAM LemA family	lemA	-	-	ko:K03744	-	-	-	-	ko00000	-	-	-	LemA
BYD3_k127_2298394_31	1237149.C900_00792	5.313e-142	458.0	COG0216@1|root,COG0216@2|Bacteria,4NF72@976|Bacteroidetes,47M9W@768503|Cytophagia	976|Bacteroidetes	J	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA	prfA	-	-	ko:K02835	-	-	-	-	ko00000,ko03012	-	-	-	PCRF,RF-1
BYD3_k127_2298394_52	643867.Ftrac_2148	1.17e-94	312.0	COG2818@1|root,COG2818@2|Bacteria,4NGRC@976|Bacteroidetes,47PXB@768503|Cytophagia	976|Bacteroidetes	L	PFAM methyladenine glycosylase	tag	-	3.2.2.20	ko:K01246	ko03410,map03410	-	-	-	ko00000,ko00001,ko01000,ko03400	-	-	-	Adenine_glyco
BYD3_k127_2298394_102	929562.Emtol_0351	2.909e-08	63.0	2ECA3@1|root,32QV4@2|Bacteria,4NRYD@976|Bacteroidetes,47QR1@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_2298394_81	313606.M23134_07735	3.516e-48	183.0	COG4585@1|root,COG4585@2|Bacteria,4NN4R@976|Bacteroidetes,47N81@768503|Cytophagia	976|Bacteroidetes	T	Histidine kinase	-	-	-	-	-	-	-	-	-	-	-	-	HATPase_c,HisKA_3
BYD3_k127_2298394_58	1237149.C900_05519	5.699e-79	269.0	COG2197@1|root,COG2197@2|Bacteria,4NKAD@976|Bacteroidetes,47NAQ@768503|Cytophagia	976|Bacteroidetes	T	helix_turn_helix, Lux Regulon	-	-	-	-	-	-	-	-	-	-	-	-	GerE,Response_reg
BYD3_k127_2298394_90	1237149.C900_05112	2.343e-33	132.0	COG1950@1|root,COG1950@2|Bacteria,4NT2I@976|Bacteroidetes,47S20@768503|Cytophagia	976|Bacteroidetes	S	PFAM Membrane protein of	yvlD	-	-	ko:K08972	-	-	-	-	ko00000	-	-	-	Phage_holin_4_2
BYD3_k127_2298394_22	1237149.C900_04925	1.26e-173	556.0	COG0322@1|root,COG0847@1|root,COG0322@2|Bacteria,COG0847@2|Bacteria,4NEQX@976|Bacteroidetes,47PIJ@768503|Cytophagia	976|Bacteroidetes	L	TIGRFAM exonuclease, DNA polymerase III, epsilon subunit family	-	-	2.7.7.7	ko:K02342	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	M00260	R00375,R00376,R00377,R00378	RC02795	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	-	-	-	GIY-YIG,RNase_T
BYD3_k127_2298394_60	1237149.C900_04913	9.825e-76	260.0	COG0639@1|root,COG0639@2|Bacteria,4NEQW@976|Bacteroidetes,47SZE@768503|Cytophagia	976|Bacteroidetes	T	Calcineurin-like phosphoesterase	-	-	3.1.3.16	ko:K07313	-	-	-	-	ko00000,ko01000	-	-	-	Metallophos
BYD3_k127_2298394_23	1237149.C900_04914	5.394e-172	543.0	COG0714@1|root,COG0714@2|Bacteria,4NDVZ@976|Bacteroidetes,47JEN@768503|Cytophagia	976|Bacteroidetes	S	PFAM ATPase family associated with various cellular activities (AAA)	-	-	-	ko:K03924	-	-	-	-	ko00000,ko01000	-	-	-	AAA_3
BYD3_k127_2298394_27	1408433.JHXV01000007_gene2855	5.043e-154	499.0	COG3291@1|root,COG3291@2|Bacteria,4PKU5@976|Bacteroidetes,1IJEZ@117743|Flavobacteriia,2PB2S@246874|Cryomorphaceae	976|Bacteroidetes	S	Pkd domain containing protein	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_2298394_0	1237149.C900_04916	0.0	1326.0	COG1629@1|root,COG1629@2|Bacteria,4PKRK@976|Bacteroidetes,47Y3I@768503|Cytophagia	976|Bacteroidetes	P	TonB dependent receptor	-	-	-	-	-	-	-	-	-	-	-	-	CarbopepD_reg_2,Plug,TonB_dep_Rec
BYD3_k127_2298394_54	1121904.ARBP01000028_gene1645	2.115e-91	310.0	COG1090@1|root,COG1090@2|Bacteria,4NINM@976|Bacteroidetes,47KA1@768503|Cytophagia	976|Bacteroidetes	S	PFAM NAD dependent epimerase dehydratase family	-	-	-	ko:K07071	-	-	-	-	ko00000	-	-	-	DUF1731,Epimerase
BYD3_k127_2298394_28	641524.ADICYQ_5525	9.162e-149	479.0	COG2152@1|root,COG2152@2|Bacteria,4NG7B@976|Bacteroidetes,47MHY@768503|Cytophagia	976|Bacteroidetes	G	beta-1,4-mannooligosaccharide phosphorylase	-	-	3.2.1.197	ko:K21065	-	-	R11544	RC00049	ko00000,ko01000	-	-	-	Glyco_hydro_130
BYD3_k127_2298394_47	1313301.AUGC01000001_gene1465	1.115e-110	362.0	COG1611@1|root,COG1611@2|Bacteria,4NF20@976|Bacteroidetes	976|Bacteroidetes	S	Belongs to the LOG family	fmt2	-	3.2.2.10	ko:K06966	ko00230,ko00240,map00230,map00240	-	R00182,R00510	RC00063,RC00318	ko00000,ko00001,ko01000	-	-	-	Lysine_decarbox
BYD3_k127_2298394_29	1089547.KB913013_gene4376	1.55e-144	466.0	COG0709@1|root,COG0709@2|Bacteria,4NI4R@976|Bacteroidetes,47JJA@768503|Cytophagia	976|Bacteroidetes	E	Synthesizes selenophosphate from selenide and ATP	selD	-	2.7.9.3	ko:K01008	ko00450,ko01100,map00450,map01100	-	R03595	RC00002,RC02878	ko00000,ko00001,ko01000,ko03016	-	-	-	AIRS,AIRS_C
BYD3_k127_2298394_75	761193.Runsl_0435	9.161e-55	195.0	COG3350@1|root,COG3350@2|Bacteria,4NR42@976|Bacteroidetes,47XU3@768503|Cytophagia	976|Bacteroidetes	S	monooxygenase activity	-	-	-	-	-	-	-	-	-	-	-	-	YHS
BYD3_k127_2298394_32	929703.KE386491_gene2598	1.06e-140	459.0	COG1253@1|root,COG1253@2|Bacteria,4NE9R@976|Bacteroidetes,47K3A@768503|Cytophagia	976|Bacteroidetes	S	Transporter associated domain	corC_1	-	-	ko:K03699	-	-	-	-	ko00000,ko02042	-	-	-	CBS,CorC_HlyC,DUF21
BYD3_k127_2298394_92	1237149.C900_01784	1.826e-27	113.0	2EDEU@1|root,337B5@2|Bacteria,4NVH5@976|Bacteroidetes,47SHQ@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_2298394_14	1237149.C900_01785	4.06e-206	649.0	COG0044@1|root,COG0044@2|Bacteria,4NE3T@976|Bacteroidetes,47JPG@768503|Cytophagia	976|Bacteroidetes	F	TIGRFAM dihydroorotase, multifunctional complex type	pyrC	-	3.5.2.3	ko:K01465	ko00240,ko01100,map00240,map01100	M00051	R01993	RC00632	ko00000,ko00001,ko00002,ko01000	-	-	-	Amidohydro_1
BYD3_k127_2298394_20	504472.Slin_5691	3.979e-176	560.0	COG0513@1|root,COG0513@2|Bacteria,4NEVI@976|Bacteroidetes,47M9H@768503|Cytophagia	976|Bacteroidetes	L	Belongs to the DEAD box helicase family	-	-	3.6.4.13	ko:K11927	ko03018,map03018	-	-	-	ko00000,ko00001,ko01000,ko03019	-	-	-	DEAD,Helicase_C
BYD3_k127_2298394_86	643867.Ftrac_2359	8.939e-41	168.0	COG0526@1|root,COG0526@2|Bacteria,4P4VR@976|Bacteroidetes,47VN1@768503|Cytophagia	976|Bacteroidetes	O	Thioredoxin-like	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_2318970_5	760192.Halhy_2280	0.0	1022.0	COG1413@1|root,COG2010@1|root,COG2133@1|root,COG1413@2|Bacteria,COG2010@2|Bacteria,COG2133@2|Bacteria,4PIZU@976|Bacteroidetes,1IYUX@117747|Sphingobacteriia	976|Bacteroidetes	C	Cytochrome c	-	-	-	-	-	-	-	-	-	-	-	-	Cytochrom_C
BYD3_k127_2318970_58	46234.ANA_C11786	8.099e-90	308.0	COG2730@1|root,COG2730@2|Bacteria	2|Bacteria	G	polysaccharide catabolic process	-	-	3.2.1.78	ko:K01218	ko00051,ko02024,map00051,map02024	-	R01332	RC00467	ko00000,ko00001,ko01000	-	GH26	-	CBM_2,Cellulase
BYD3_k127_2318970_36	1550091.JROE01000002_gene736	1.041e-129	435.0	COG3188@1|root,COG3188@2|Bacteria,4NHCJ@976|Bacteroidetes,1ISJN@117747|Sphingobacteriia	976|Bacteroidetes	NU	usher protein	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_2318970_69	1122621.ATZA01000023_gene4240	8.46e-60	239.0	COG0419@1|root,COG3179@1|root,COG0419@2|Bacteria,COG3179@2|Bacteria,4NGQP@976|Bacteroidetes,1IRWD@117747|Sphingobacteriia	976|Bacteroidetes	L	oxidoreductase activity	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_2318970_102	1328313.DS2_03780	1.959e-15	91.0	COG4733@1|root,COG4733@2|Bacteria,1N010@1224|Proteobacteria	1224|Proteobacteria	C	fibronectin type III domain protein	-	-	-	ko:K06882	-	-	-	-	ko00000	-	-	-	fn3
BYD3_k127_2318970_101	1124780.ANNU01000020_gene3286	1.004e-18	99.0	COG2319@1|root,COG5184@1|root,COG2319@2|Bacteria,COG5184@2|Bacteria,4NZ4Y@976|Bacteroidetes	976|Bacteroidetes	DZ	IPT/TIG domain	-	-	-	-	-	-	-	-	-	-	-	-	TIG
BYD3_k127_2318970_54	509635.N824_25365	4.941e-93	318.0	COG0523@1|root,COG0523@2|Bacteria,4P1A4@976|Bacteroidetes,1IW1I@117747|Sphingobacteriia	976|Bacteroidetes	S	CobW/HypB/UreG, nucleotide-binding domain	-	-	-	-	-	-	-	-	-	-	-	-	cobW
BYD3_k127_2318970_0	1123248.KB893359_gene1998	0.0	1245.0	COG4354@1|root,COG4354@2|Bacteria,4NFQW@976|Bacteroidetes,1IR0K@117747|Sphingobacteriia	976|Bacteroidetes	G	beta-glucosidase 2, glycosyl-hydrolase family 116 N-term	-	-	3.2.1.45	ko:K17108	ko00511,ko00600,ko01100,map00511,map00600,map01100	-	R01498	RC00059,RC00451	ko00000,ko00001,ko01000	-	GH116	-	DUF608,Glyco_hydr_116N
BYD3_k127_2318970_34	1279009.ADICEAN_00381	3.042e-135	436.0	COG0568@1|root,COG0568@2|Bacteria,4NEBF@976|Bacteroidetes,47JZ7@768503|Cytophagia	976|Bacteroidetes	K	Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released	rpoD	-	-	ko:K03086	-	-	-	-	ko00000,ko03021	-	-	-	Sigma70_r1_2,Sigma70_r2,Sigma70_r3,Sigma70_r4
BYD3_k127_2318970_99	1392488.JHZY01000002_gene895	5.591e-25	104.0	COG1278@1|root,COG1278@2|Bacteria,4NURE@976|Bacteroidetes,1I50Z@117743|Flavobacteriia,2XKC5@283735|Leeuwenhoekiella	976|Bacteroidetes	K	'Cold-shock' DNA-binding domain	-	-	-	ko:K03704	-	-	-	-	ko00000,ko03000	-	-	-	CSD
BYD3_k127_2318970_52	1048983.EL17_08115	1.198e-95	325.0	COG0679@1|root,COG0679@2|Bacteria,4NGI3@976|Bacteroidetes,47MZJ@768503|Cytophagia	976|Bacteroidetes	S	Auxin Efflux Carrier	-	-	-	ko:K07088	-	-	-	-	ko00000	-	-	-	-
BYD3_k127_2318970_27	926549.KI421517_gene2913	6.009e-150	483.0	COG0079@1|root,COG0079@2|Bacteria,4NEW8@976|Bacteroidetes,47M27@768503|Cytophagia	976|Bacteroidetes	E	PFAM Aminotransferase class I and II	-	-	2.6.1.9	ko:K00817	ko00340,ko00350,ko00360,ko00400,ko00401,ko00960,ko01100,ko01110,ko01130,ko01230,map00340,map00350,map00360,map00400,map00401,map00960,map01100,map01110,map01130,map01230	M00026	R00694,R00734,R03243	RC00006,RC00888	ko00000,ko00001,ko00002,ko01000,ko01007	-	-	-	Aminotran_1_2
BYD3_k127_2318970_103	1121904.ARBP01000013_gene410	6.97e-15	79.0	29WUX@1|root,30IGE@2|Bacteria,4NNWZ@976|Bacteroidetes,47PS9@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_2318970_20	926549.KI421517_gene2907	1.124e-173	557.0	COG4198@1|root,COG4198@2|Bacteria,4NEQC@976|Bacteroidetes,47JPV@768503|Cytophagia	976|Bacteroidetes	S	Starch-binding associating with outer membrane	-	-	-	-	-	-	-	-	-	-	-	-	SusD-like_2
BYD3_k127_2318970_1	926549.KI421517_gene2906	0.0	1180.0	COG4206@1|root,COG4206@2|Bacteria,4NZWU@976|Bacteroidetes,47Y2J@768503|Cytophagia	976|Bacteroidetes	H	PFAM TonB-dependent Receptor Plug	-	-	-	-	-	-	-	-	-	-	-	-	CarbopepD_reg_2,Plug,TonB_dep_Rec
BYD3_k127_2318970_89	1121481.AUAS01000003_gene4032	1.607e-31	129.0	COG4978@1|root,COG4978@2|Bacteria,4NW58@976|Bacteroidetes,47R2M@768503|Cytophagia	976|Bacteroidetes	KT	Transcriptional regulator	-	-	-	-	-	-	-	-	-	-	-	-	GyrI-like
BYD3_k127_2318970_100	264462.Bd3651	6.465e-23	103.0	2DHH9@1|root,2ZZRU@2|Bacteria,1NIVT@1224|Proteobacteria,42X9Y@68525|delta/epsilon subdivisions	1224|Proteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	DoxX
BYD3_k127_2318970_28	694427.Palpr_2652	7.652e-144	464.0	COG1902@1|root,COG1902@2|Bacteria,4NF98@976|Bacteroidetes,2FNNA@200643|Bacteroidia,22W6P@171551|Porphyromonadaceae	976|Bacteroidetes	C	NADH:flavin oxidoreductase / NADH oxidase family	-	-	-	ko:K10680	ko00633,ko01120,map00633,map01120	-	R08014,R08017,R08042	RC00250	ko00000,ko00001,ko01000	-	-	-	Oxidored_FMN
BYD3_k127_2318970_94	1124780.ANNU01000036_gene22	2.844e-26	110.0	COG0640@1|root,COG0640@2|Bacteria,4NUW3@976|Bacteroidetes,47RXB@768503|Cytophagia	976|Bacteroidetes	K	helix_turn_helix, Arsenical Resistance Operon Repressor	-	-	-	ko:K03892	-	-	-	-	ko00000,ko03000	-	-	-	HTH_20,HTH_5
BYD3_k127_2318970_67	1235803.C825_00251	3.142e-65	241.0	COG1119@1|root,COG1119@2|Bacteria,4NEWY@976|Bacteroidetes,2FMN3@200643|Bacteroidia,22X6F@171551|Porphyromonadaceae	976|Bacteroidetes	P	ATPases associated with a variety of cellular activities	modF	-	-	ko:K05776	ko02010,map02010	M00189	-	-	ko00000,ko00001,ko00002,ko02000	-	-	-	ABC_tran
BYD3_k127_2318970_81	153721.MYP_1217	3.43e-40	154.0	COG3832@1|root,COG3832@2|Bacteria,4NT4P@976|Bacteroidetes,47R8X@768503|Cytophagia	976|Bacteroidetes	S	Activator of Hsp90 ATPase homolog 1-like protein	-	-	-	-	-	-	-	-	-	-	-	-	AHSA1
BYD3_k127_2318970_95	483219.LILAB_34370	6.113e-26	109.0	COG4430@1|root,COG4430@2|Bacteria,1NASK@1224|Proteobacteria,43202@68525|delta/epsilon subdivisions,2WX2P@28221|Deltaproteobacteria,2Z2U2@29|Myxococcales	28221|Deltaproteobacteria	S	Bacteriocin-protection, YdeI or OmpD-Associated	-	-	-	-	-	-	-	-	-	-	-	-	OmdA
BYD3_k127_2318970_40	929713.NIASO_15795	4.438e-126	412.0	COG0622@1|root,COG0622@2|Bacteria,4NGFH@976|Bacteroidetes,1INW3@117747|Sphingobacteriia	976|Bacteroidetes	S	Calcineurin-like phosphoesterase superfamily domain	-	-	-	-	-	-	-	-	-	-	-	-	Metallophos_2
BYD3_k127_2318970_59	1121481.AUAS01000006_gene766	4.68e-84	288.0	COG0726@1|root,COG0726@2|Bacteria,4NKYS@976|Bacteroidetes,47NF6@768503|Cytophagia	976|Bacteroidetes	G	PFAM Polysaccharide deacetylase	pgdA	-	-	-	-	-	-	-	-	-	-	-	Polysacc_deac_1
BYD3_k127_2318970_16	1185876.BN8_03723	2.556e-190	602.0	COG0513@1|root,COG0513@2|Bacteria,4NEVI@976|Bacteroidetes,47J9E@768503|Cytophagia	976|Bacteroidetes	L	Belongs to the DEAD box helicase family	rhlE	-	3.6.4.13	ko:K11927	ko03018,map03018	-	-	-	ko00000,ko00001,ko01000,ko03019	-	-	-	DEAD,Helicase_C
BYD3_k127_2318970_49	762903.Pedsa_3537	1.232e-101	333.0	COG0605@1|root,COG0605@2|Bacteria,4NDZ4@976|Bacteroidetes,1IQF9@117747|Sphingobacteriia	976|Bacteroidetes	P	Destroys radicals which are normally produced within the cells and which are toxic to biological systems	sodA	-	1.15.1.1	ko:K04564	ko04013,ko04068,ko04146,ko04211,ko04212,ko04213,ko05016,map04013,map04068,map04146,map04211,map04212,map04213,map05016	-	-	-	ko00000,ko00001,ko01000	-	-	-	Sod_Fe_C,Sod_Fe_N
BYD3_k127_2318970_85	1434325.AZQN01000003_gene2005	9.156e-36	139.0	COG0629@1|root,COG0629@2|Bacteria,4NT9M@976|Bacteroidetes,47XYD@768503|Cytophagia	976|Bacteroidetes	L	Domain of unknown function (DUF3127)	-	-	-	-	-	-	-	-	-	-	-	-	DUF3127
BYD3_k127_2318970_71	1124780.ANNU01000006_gene2814	2.294e-58	206.0	COG0590@1|root,COG0590@2|Bacteria,4NNJ2@976|Bacteroidetes,47PPY@768503|Cytophagia	976|Bacteroidetes	FJ	Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2)	tadA	-	3.5.4.33	ko:K11991	-	-	R10223	RC00477	ko00000,ko01000,ko03016	-	-	-	MafB19-deam,dCMP_cyt_deam_1
BYD3_k127_2318970_73	1237149.C900_00723	9.862e-53	192.0	2E7DW@1|root,331WY@2|Bacteria,4NUZQ@976|Bacteroidetes,47RNZ@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_2318970_7	1237149.C900_00724	7.049e-305	942.0	COG0173@1|root,COG0173@2|Bacteria,4NECY@976|Bacteroidetes,47JC8@768503|Cytophagia	976|Bacteroidetes	J	Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp)	aspS	-	6.1.1.12	ko:K01876	ko00970,map00970	M00359,M00360	R05577	RC00055,RC00523	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029	-	-	-	GAD,tRNA-synt_2,tRNA_anti-codon
BYD3_k127_2318970_29	1121875.KB907549_gene1916	7.111e-143	463.0	COG3503@1|root,COG3503@2|Bacteria,4NFAF@976|Bacteroidetes,1HX24@117743|Flavobacteriia	976|Bacteroidetes	S	Protein of unknown function (DUF1624)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1624
BYD3_k127_2318970_57	1123248.KB893348_gene142	2.069e-90	307.0	2DBQG@1|root,2ZADX@2|Bacteria,4PI3K@976|Bacteroidetes,1IUKI@117747|Sphingobacteriia	976|Bacteroidetes	S	Domain of Unknown Function (DUF1080)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1080
BYD3_k127_2318970_22	929556.Solca_2915	1.22e-170	544.0	COG0477@1|root,COG2814@2|Bacteria,4NESW@976|Bacteroidetes,1IPCU@117747|Sphingobacteriia	976|Bacteroidetes	EGP	PFAM Major Facilitator Superfamily	-	-	-	-	-	-	-	-	-	-	-	-	MFS_1,Sugar_tr
BYD3_k127_2318970_56	1380600.AUYN01000010_gene883	1.686e-91	313.0	COG0457@1|root,COG0457@2|Bacteria,4NEYK@976|Bacteroidetes,1I0QJ@117743|Flavobacteriia	976|Bacteroidetes	S	Protein of unknown function (DUF2911)	-	-	-	-	-	-	-	-	-	-	-	-	DUF2911,TPR_2,TPR_8
BYD3_k127_2318970_61	1279009.ADICEAN_04058	1.161e-81	279.0	COG0545@1|root,COG0545@2|Bacteria,4NDW4@976|Bacteroidetes,47K8M@768503|Cytophagia	976|Bacteroidetes	O	Domain amino terminal to FKBP-type peptidyl-prolyl isomerase	fklB	-	5.2.1.8	ko:K03772,ko:K03773	-	-	-	-	ko00000,ko01000,ko03110	-	-	-	FKBP_C,FKBP_N
BYD3_k127_2318970_93	1121373.KB903623_gene2324	3.309e-27	126.0	COG4783@1|root,COG4783@2|Bacteria,4NM0X@976|Bacteroidetes,47SKP@768503|Cytophagia	976|Bacteroidetes	S	Peptidase family M48	-	-	-	-	-	-	-	-	-	-	-	-	Peptidase_M48
BYD3_k127_2318970_3	761193.Runsl_0785	0.0	1102.0	COG3002@1|root,COG3002@2|Bacteria,4NECE@976|Bacteroidetes,47MDY@768503|Cytophagia	976|Bacteroidetes	S	Belongs to the UPF0753 family	-	-	-	ko:K09822	-	-	-	-	ko00000	-	-	-	DUF2309
BYD3_k127_2318970_8	929703.KE386491_gene816	9.736e-303	938.0	COG1009@1|root,COG1009@2|Bacteria,4NEBM@976|Bacteroidetes,47NRZ@768503|Cytophagia	976|Bacteroidetes	CP	NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus	-	-	1.6.5.3	ko:K00341	ko00190,ko01100,map00190,map01100	M00144	R11945	RC00061	ko00000,ko00001,ko00002,ko01000	3.D.1	-	-	Proton_antipo_M,Proton_antipo_N
BYD3_k127_2318970_90	745718.JADT01000017_gene1042	3.751e-31	132.0	COG1266@1|root,COG1266@2|Bacteria,4NVXW@976|Bacteroidetes,1I6MN@117743|Flavobacteriia	976|Bacteroidetes	S	CAAX protease self-immunity	-	-	-	ko:K07052	-	-	-	-	ko00000	-	-	-	Abi
BYD3_k127_2318970_96	745718.JADT01000017_gene1043	1.14e-25	113.0	2C3QT@1|root,32YUW@2|Bacteria,4NWNZ@976|Bacteroidetes,1I6M5@117743|Flavobacteriia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_2318970_48	153721.MYP_4969	2.679e-106	361.0	COG1231@1|root,COG1231@2|Bacteria,4NP86@976|Bacteroidetes,47PVH@768503|Cytophagia	976|Bacteroidetes	E	Flavin containing amine oxidoreductase	-	-	-	-	-	-	-	-	-	-	-	-	Amino_oxidase
BYD3_k127_2318970_87	1124780.ANNU01000017_gene1920	3.179e-33	132.0	COG1186@1|root,COG1186@2|Bacteria,4NQ41@976|Bacteroidetes,47R30@768503|Cytophagia	976|Bacteroidetes	J	RF-1 domain	arfB	-	-	ko:K15034	-	-	-	-	ko00000,ko03012	-	-	-	RF-1
BYD3_k127_2318970_51	468059.AUHA01000003_gene1477	7.431e-96	344.0	COG2982@1|root,COG2982@2|Bacteria,4NHD3@976|Bacteroidetes,1IQUD@117747|Sphingobacteriia	976|Bacteroidetes	M	AsmA family	-	-	-	-	-	-	-	-	-	-	-	-	AsmA,AsmA_2,DUF3971
BYD3_k127_2318970_25	926549.KI421517_gene3249	1.205e-155	500.0	COG0738@1|root,COG0738@2|Bacteria,4NFHM@976|Bacteroidetes,47JNK@768503|Cytophagia	976|Bacteroidetes	G	PFAM Major Facilitator Superfamily	-	-	-	-	-	-	-	-	-	-	-	-	MFS_1
BYD3_k127_2318970_15	1123278.KB893549_gene5175	1.192e-192	610.0	COG0673@1|root,COG0673@2|Bacteria,4NGGS@976|Bacteroidetes,47JH2@768503|Cytophagia	976|Bacteroidetes	S	Oxidoreductase family, C-terminal alpha/beta domain	-	-	-	-	-	-	-	-	-	-	-	-	GFO_IDH_MocA,GFO_IDH_MocA_C
BYD3_k127_2318970_19	1123248.KB893314_gene3701	2.615e-176	559.0	COG3525@1|root,COG3525@2|Bacteria,4NGV2@976|Bacteroidetes,1IRPA@117747|Sphingobacteriia	976|Bacteroidetes	G	Glycosyl hydrolase family 20, catalytic domain	-	-	-	-	-	-	-	-	-	-	-	-	Glyco_hydro_20
BYD3_k127_2318970_6	761193.Runsl_4441	3.86e-318	988.0	COG1649@1|root,COG1649@2|Bacteria,4NJ20@976|Bacteroidetes,47NNM@768503|Cytophagia	976|Bacteroidetes	S	PFAM Uncharacterised BCR, COG1649	-	-	-	-	-	-	-	-	-	-	-	-	GHL6
BYD3_k127_2318970_10	1121481.AUAS01000001_gene4855	1.289e-241	752.0	COG0673@1|root,COG0673@2|Bacteria,4NDYI@976|Bacteroidetes,47N60@768503|Cytophagia	976|Bacteroidetes	S	Oxidoreductase family, NAD-binding Rossmann fold	-	-	-	-	-	-	-	-	-	-	-	-	GFO_IDH_MocA,GFO_IDH_MocA_C,TAT_signal
BYD3_k127_2318970_44	1123057.P872_09360	1.092e-118	389.0	COG1082@1|root,COG1082@2|Bacteria,4NEUS@976|Bacteroidetes,47NHQ@768503|Cytophagia	976|Bacteroidetes	G	PFAM Xylose isomerase	-	-	-	-	-	-	-	-	-	-	-	-	AP_endonuc_2
BYD3_k127_2318970_62	1279009.ADICEAN_01376	2.25e-80	274.0	COG0500@1|root,COG2226@2|Bacteria,4NG68@976|Bacteroidetes,47NYV@768503|Cytophagia	976|Bacteroidetes	Q	Methyltransferase domain	-	-	-	-	-	-	-	-	-	-	-	-	Methyltransf_11
BYD3_k127_2318970_33	1296415.JACC01000002_gene3283	4.779e-136	455.0	COG1361@1|root,COG1361@2|Bacteria,4PPVB@976|Bacteroidetes,1IKUU@117743|Flavobacteriia	976|Bacteroidetes	M	Conserved repeat domain	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_2318970_98	1408433.JHXV01000012_gene3930	2.962e-25	122.0	COG2373@1|root,COG3391@1|root,COG2373@2|Bacteria,COG3391@2|Bacteria,4PKKG@976|Bacteroidetes,1IJBU@117743|Flavobacteriia	976|Bacteroidetes	U	IgGFc binding protein	-	-	-	-	-	-	-	-	-	-	-	-	CHU_C,DUF11,DUF4347,IgGFc_binding,SprB
BYD3_k127_2318970_13	215803.DB30_4063	1.824e-194	621.0	COG3653@1|root,COG3653@2|Bacteria,1MWWY@1224|Proteobacteria,42PGV@68525|delta/epsilon subdivisions,2WIS0@28221|Deltaproteobacteria,2YZVC@29|Myxococcales	28221|Deltaproteobacteria	Q	Amidohydrolase family	-	-	3.5.1.81	ko:K06015	-	-	R02192	RC00064,RC00328	ko00000,ko01000	-	-	-	Amidohydro_3
BYD3_k127_2318970_11	1237149.C900_02651	4.268e-211	675.0	COG0457@1|root,COG0823@1|root,COG2885@1|root,COG0457@2|Bacteria,COG0823@2|Bacteria,COG2885@2|Bacteria,4NHCE@976|Bacteroidetes,47X9U@768503|Cytophagia	976|Bacteroidetes	MU	OmpA family	-	-	-	-	-	-	-	-	-	-	-	-	OmpA,PD40,TPR_11,TPR_16
BYD3_k127_2318970_66	1185876.BN8_04885	4.425e-70	247.0	COG0010@1|root,COG0010@2|Bacteria,4NE26@976|Bacteroidetes,47N30@768503|Cytophagia	976|Bacteroidetes	E	Belongs to the arginase family	rocF	-	3.5.3.1,3.5.3.11	ko:K01476,ko:K01480	ko00220,ko00330,ko01100,ko01110,ko01130,ko01230,ko05146,map00220,map00330,map01100,map01110,map01130,map01230,map05146	M00029,M00133,M00134	R00551,R01157	RC00024,RC00329	ko00000,ko00001,ko00002,ko01000	-	-	-	Arginase
BYD3_k127_2318970_68	1443665.JACA01000020_gene4948	2.87e-61	219.0	COG0491@1|root,COG0491@2|Bacteria,4NPPW@976|Bacteroidetes,1I1N1@117743|Flavobacteriia,2YJJM@290174|Aquimarina	976|Bacteroidetes	S	Metallo-beta-lactamase superfamily	ccrA	-	3.5.2.6	ko:K17837	ko01501,map01501	-	R06363	RC01499	ko00000,ko00001,ko01000	-	-	-	Lactamase_B
BYD3_k127_2318970_64	714943.Mucpa_6663	4.549e-79	272.0	COG0363@1|root,COG0363@2|Bacteria,4NGB9@976|Bacteroidetes,1ISDX@117747|Sphingobacteriia	976|Bacteroidetes	G	Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase	pgl	-	3.1.1.31	ko:K01057	ko00030,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map01100,map01110,map01120,map01130,map01200	M00004,M00006,M00008	R02035	RC00537	ko00000,ko00001,ko00002,ko01000	-	-	-	Glucosamine_iso
BYD3_k127_2318970_9	714943.Mucpa_6662	2.516e-250	780.0	COG0364@1|root,COG0364@2|Bacteria,4NE59@976|Bacteroidetes,1IQZ7@117747|Sphingobacteriia	976|Bacteroidetes	G	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone	zwf	-	1.1.1.363,1.1.1.49	ko:K00036	ko00030,ko00480,ko01100,ko01110,ko01120,ko01130,ko01200,ko05230,map00030,map00480,map01100,map01110,map01120,map01130,map01200,map05230	M00004,M00006,M00008	R00835,R02736,R10907	RC00001,RC00066	ko00000,ko00001,ko00002,ko01000,ko04147	-	-	-	G6PD_C,G6PD_N
BYD3_k127_2318970_12	714943.Mucpa_6661	2.153e-207	653.0	COG0362@1|root,COG0362@2|Bacteria,4NG05@976|Bacteroidetes,1IPZC@117747|Sphingobacteriia	976|Bacteroidetes	G	Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH	gnd	-	1.1.1.343,1.1.1.44	ko:K00033	ko00030,ko00480,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map00480,map01100,map01110,map01120,map01130,map01200	M00004,M00006	R01528,R10221	RC00001,RC00539	ko00000,ko00001,ko00002,ko01000	-	-	-	6PGD,NAD_binding_2
BYD3_k127_2318970_72	1121481.AUAS01000005_gene1914	1.517e-57	203.0	COG0698@1|root,COG0698@2|Bacteria,4NP5D@976|Bacteroidetes	976|Bacteroidetes	G	Ribose 5-phosphate isomerase	-	-	5.3.1.6	ko:K01808	ko00030,ko00051,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00051,map00710,map01100,map01110,map01120,map01130,map01200,map01230	M00004,M00007,M00165,M00167	R01056,R09030	RC00376,RC00434	ko00000,ko00001,ko00002,ko01000	-	-	-	LacAB_rpiB
BYD3_k127_2318970_4	1123248.KB893314_gene3297	0.0	1048.0	COG0021@1|root,COG0021@2|Bacteria,4P14U@976|Bacteroidetes,1INZ8@117747|Sphingobacteriia	976|Bacteroidetes	G	Belongs to the transketolase family	tkt	-	2.2.1.1	ko:K00615	ko00030,ko00710,ko01051,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00710,map01051,map01100,map01110,map01120,map01130,map01200,map01230	M00004,M00007,M00165,M00167	R01067,R01641,R01830,R06590	RC00032,RC00226,RC00571,RC01560	ko00000,ko00001,ko00002,ko01000	-	-	-	Transket_pyr,Transketolase_C,Transketolase_N
BYD3_k127_2318970_53	714943.Mucpa_6656	4.466e-94	315.0	COG1940@1|root,COG1940@2|Bacteria,4NFNR@976|Bacteroidetes,1IRJC@117747|Sphingobacteriia	976|Bacteroidetes	GK	ROK family	ppgK	-	2.7.1.2,2.7.1.63	ko:K00845,ko:K00886	ko00010,ko00052,ko00500,ko00520,ko00521,ko00524,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00052,map00500,map00520,map00521,map00524,map01100,map01110,map01120,map01130,map01200	M00001,M00549	R00299,R01600,R01786,R02187,R02189	RC00002,RC00017	ko00000,ko00001,ko00002,ko01000	-	-	-	ROK
BYD3_k127_2318970_38	1121957.ATVL01000006_gene2906	9.686e-128	418.0	COG4307@1|root,COG4307@2|Bacteria,4NFG6@976|Bacteroidetes,47NT7@768503|Cytophagia	976|Bacteroidetes	S	Putative zinc-binding metallo-peptidase	-	-	-	-	-	-	-	-	-	-	-	-	Peptidase_Mx,zinc-ribbon_6
BYD3_k127_2318970_88	153721.MYP_2590	1.633e-32	128.0	COG0633@1|root,COG0633@2|Bacteria,4NQ4P@976|Bacteroidetes,47QBT@768503|Cytophagia	976|Bacteroidetes	C	Ferredoxin	thcC	-	-	ko:K04755	-	-	-	-	ko00000	-	-	-	Fer2
BYD3_k127_2318970_21	1124780.ANNU01000025_gene3371	1.913e-171	542.0	COG0492@1|root,COG0492@2|Bacteria,4NEQM@976|Bacteroidetes,47KZW@768503|Cytophagia	976|Bacteroidetes	C	Ferredoxin--NADP reductase	trxB2	-	1.8.1.9	ko:K00384	ko00450,map00450	-	R02016,R03596,R09372	RC00013,RC02518,RC02873	ko00000,ko00001,ko01000	-	-	-	Pyr_redox_2
BYD3_k127_2318970_70	1124780.ANNU01000025_gene3372	8.887e-59	208.0	COG1846@1|root,COG1846@2|Bacteria,4NP8N@976|Bacteroidetes,47PSY@768503|Cytophagia	976|Bacteroidetes	K	transcriptional regulator	-	-	-	-	-	-	-	-	-	-	-	-	MarR,MarR_2
BYD3_k127_2318970_55	714943.Mucpa_6429	3.659e-92	309.0	COG0266@1|root,COG0266@2|Bacteria,4NFM2@976|Bacteroidetes,1IS7F@117747|Sphingobacteriia	976|Bacteroidetes	L	DNA glycosylase AP lyase, H2TH DNA-binding	-	-	3.2.2.23,4.2.99.18	ko:K10563	ko03410,map03410	-	-	-	ko00000,ko00001,ko01000,ko03400	-	-	-	Fapy_DNA_glyco,H2TH
BYD3_k127_2318970_43	1121904.ARBP01000004_gene990	8.862e-124	408.0	COG2942@1|root,COG2942@2|Bacteria,4NEH7@976|Bacteroidetes,47K1V@768503|Cytophagia	976|Bacteroidetes	G	Catalyzes the reversible epimerization of cellobiose to 4-O-beta-D-glucopyranosyl-D-mannose (Glc-Man)	-	-	5.1.3.11	ko:K16213	-	-	R01445,R10810	RC00289	ko00000,ko01000	-	-	-	GlcNAc_2-epim
BYD3_k127_2318970_78	1237149.C900_00803	2.15e-45	171.0	29TMV@1|root,30EVG@2|Bacteria,4NNPM@976|Bacteroidetes,47RB5@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_2318970_17	1121904.ARBP01000002_gene6983	3.961e-179	589.0	COG4206@1|root,COG4206@2|Bacteria,4PKF2@976|Bacteroidetes,47JDS@768503|Cytophagia	976|Bacteroidetes	H	TonB-dependent Receptor Plug	-	-	-	ko:K02014	-	-	-	-	ko00000,ko02000	1.B.14	-	-	CarbopepD_reg_2,Plug,TonB_dep_Rec
BYD3_k127_2318970_92	1121859.KB890738_gene3003	2.156e-30	123.0	COG3118@1|root,COG3118@2|Bacteria,4NS6N@976|Bacteroidetes,47R18@768503|Cytophagia	976|Bacteroidetes	O	Belongs to the thioredoxin family	-	-	-	ko:K03671	ko04621,ko05418,map04621,map05418	-	-	-	ko00000,ko00001,ko03110	-	-	-	Thioredoxin
BYD3_k127_2318970_50	1124780.ANNU01000042_gene612	7.239e-96	323.0	COG0484@1|root,COG0484@2|Bacteria,4NE4X@976|Bacteroidetes,47JWI@768503|Cytophagia	976|Bacteroidetes	O	DnaJ molecular chaperone homology domain	dnaJ2	-	-	ko:K03686,ko:K05516	-	-	-	-	ko00000,ko03029,ko03036,ko03110	-	-	-	DnaJ,DnaJ_C
BYD3_k127_2318970_91	471854.Dfer_2857	6.243e-31	126.0	29AKN@1|root,2ZXKK@2|Bacteria	2|Bacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_2318970_39	714943.Mucpa_4492	1.302e-127	416.0	COG0604@1|root,COG0604@2|Bacteria,4NEYW@976|Bacteroidetes,1IP5X@117747|Sphingobacteriia	976|Bacteroidetes	C	PFAM Alcohol dehydrogenase	-	-	1.6.5.5	ko:K00344	-	-	-	-	ko00000,ko01000	-	-	-	ADH_N,ADH_zinc_N,ADH_zinc_N_2
BYD3_k127_2318970_63	929703.KE386491_gene1249	9.452e-80	271.0	COG2197@1|root,COG2197@2|Bacteria,4NHTM@976|Bacteroidetes,47PWE@768503|Cytophagia	976|Bacteroidetes	KT	Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain	-	-	-	-	-	-	-	-	-	-	-	-	GerE,Response_reg
BYD3_k127_2318970_35	929703.KE386491_gene204	8.883e-132	457.0	COG3292@1|root,COG4585@1|root,COG3292@2|Bacteria,COG4585@2|Bacteria,4NHSC@976|Bacteroidetes,47NEM@768503|Cytophagia	976|Bacteroidetes	T	Two component regulator three Y	-	-	-	-	-	-	-	-	-	-	-	-	HATPase_c,HisKA_3,Reg_prop,Y_Y_Y
BYD3_k127_2318970_76	386456.JQKN01000002_gene2413	1.805e-49	182.0	COG0784@1|root,arCOG02589@2157|Archaea,2XVUK@28890|Euryarchaeota	28890|Euryarchaeota	T	response regulator, receiver	rre-1	-	-	ko:K02485	-	-	-	-	ko00000,ko02022	-	-	-	Response_reg
BYD3_k127_2318970_80	1237149.C900_01497	1.658e-40	156.0	2E3CB@1|root,32YBM@2|Bacteria,4PPUF@976|Bacteroidetes	2|Bacteria	S	Domain of unknown function (DUF4154)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4154
BYD3_k127_2318970_31	1237149.C900_01498	1.297e-141	470.0	COG4251@1|root,COG5000@1|root,COG4251@2|Bacteria,COG5000@2|Bacteria,4NDUQ@976|Bacteroidetes,47PTN@768503|Cytophagia	976|Bacteroidetes	T	His Kinase A (phosphoacceptor) domain	-	-	-	-	-	-	-	-	-	-	-	-	CHASE3,GAF_2,HAMP,HATPase_c,HisKA,PAS_3,PAS_9,Response_reg
BYD3_k127_2318970_47	269798.CHU_2081	5.403e-109	364.0	COG3437@1|root,COG4251@1|root,COG3437@2|Bacteria,COG4251@2|Bacteria,4NI5R@976|Bacteroidetes,47V13@768503|Cytophagia	976|Bacteroidetes	T	His Kinase A (phosphoacceptor) domain	-	-	-	-	-	-	-	-	-	-	-	-	HATPase_c,Response_reg
BYD3_k127_2318970_32	1150600.ADIARSV_4037	1.428e-139	455.0	28HII@1|root,2Z7TZ@2|Bacteria,4NHR6@976|Bacteroidetes,1INR1@117747|Sphingobacteriia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_2318970_79	700598.Niako_0935	1.744e-44	167.0	COG3631@1|root,COG3631@2|Bacteria,4P470@976|Bacteroidetes	976|Bacteroidetes	S	Ketosteroid isomerase-related protein	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_2318970_77	1124780.ANNU01000063_gene581	7.658e-47	173.0	COG4244@1|root,COG4244@2|Bacteria,4NQTK@976|Bacteroidetes,47WH0@768503|Cytophagia	976|Bacteroidetes	S	Membrane	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_2318970_86	1121931.AUHG01000012_gene2940	9.567e-35	136.0	2E5AE@1|root,3302K@2|Bacteria,4NWQK@976|Bacteroidetes,1I65X@117743|Flavobacteriia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_2318970_2	504472.Slin_4532	0.0	1113.0	COG4772@1|root,COG4772@2|Bacteria,4NH5V@976|Bacteroidetes,47KFP@768503|Cytophagia	976|Bacteroidetes	P	PFAM TonB-dependent Receptor	fecA	-	-	ko:K16091	-	-	-	-	ko00000,ko02000	1.B.14.1.14	-	-	CarbopepD_reg_2,Plug,TonB_dep_Rec
BYD3_k127_2318970_14	1123278.KB893558_gene3274	5.133e-194	614.0	COG3250@1|root,COG3250@2|Bacteria,4NE9C@976|Bacteroidetes,47KZT@768503|Cytophagia	976|Bacteroidetes	G	Horizontally Transferred TransMembrane Domain	-	-	-	-	-	-	-	-	-	-	-	-	VKG_Carbox
BYD3_k127_2318970_30	929703.KE386491_gene3610	7.327e-142	459.0	COG3489@1|root,COG3489@2|Bacteria,4NFAT@976|Bacteroidetes,47NBA@768503|Cytophagia	976|Bacteroidetes	S	Imelysin	-	-	-	-	-	-	-	-	-	-	-	-	Peptidase_M75
BYD3_k127_2318970_26	1121481.AUAS01000004_gene1309	1.341e-150	486.0	28HNS@1|root,2Z7WY@2|Bacteria,4NDYC@976|Bacteroidetes,47MGX@768503|Cytophagia	976|Bacteroidetes	S	Domain of unknown function (DUF4856)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4856
BYD3_k127_2318970_74	485918.Cpin_5750	1.083e-52	188.0	2CHCP@1|root,32S5R@2|Bacteria,4NS9G@976|Bacteroidetes,1ITGH@117747|Sphingobacteriia	976|Bacteroidetes	S	Domain of unknown function (DU1801)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1801
BYD3_k127_2318970_83	471854.Dfer_5269	1.495e-39	152.0	COG5500@1|root,COG5500@2|Bacteria,4NR9R@976|Bacteroidetes,47QIB@768503|Cytophagia	976|Bacteroidetes	S	Domain of unknown function (DUF1772)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1772
BYD3_k127_2318970_65	929556.Solca_2931	1.118e-73	254.0	COG0262@1|root,COG0262@2|Bacteria,4NPX6@976|Bacteroidetes,1IX9S@117747|Sphingobacteriia	976|Bacteroidetes	H	RibD C-terminal domain	-	-	1.5.1.3	ko:K00287	ko00670,ko00790,ko01100,ko01523,map00670,map00790,map01100,map01523	M00126,M00840	R00936,R00937,R00939,R00940,R02235,R02236,R11765	RC00109,RC00110,RC00158	ko00000,ko00001,ko00002,ko01000	-	-	-	RibD_C
BYD3_k127_2318970_75	925409.KI911562_gene2770	1.304e-49	178.0	COG3795@1|root,COG3795@2|Bacteria,4NTI1@976|Bacteroidetes,1IYV5@117747|Sphingobacteriia	976|Bacteroidetes	S	YCII-related domain	-	-	-	-	-	-	-	-	-	-	-	-	YCII
BYD3_k127_2318970_23	925409.KI911562_gene2769	3.934e-170	542.0	COG4941@1|root,COG4941@2|Bacteria,4NGCS@976|Bacteroidetes,1IRPG@117747|Sphingobacteriia	976|Bacteroidetes	K	PFAM RNA polymerase sigma-70 region 2	-	-	-	ko:K03088	-	-	-	-	ko00000,ko03021	-	-	-	Sigma70_r2,Sigma70_r4_2
BYD3_k127_2318970_60	1250232.JQNJ01000001_gene2672	3.081e-82	280.0	COG1416@1|root,COG1416@2|Bacteria,4NH85@976|Bacteroidetes	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_2318970_82	1121931.AUHG01000016_gene1007	6.177e-40	153.0	COG1416@1|root,COG1416@2|Bacteria,4NUNC@976|Bacteroidetes,1I4Q6@117743|Flavobacteriia	976|Bacteroidetes	S	DsrE/DsrF-like family	-	-	-	ko:K09004	-	-	-	-	ko00000	-	-	-	DrsE
BYD3_k127_2318970_42	1120965.AUBV01000001_gene3359	6.329e-124	406.0	COG3258@1|root,COG3258@2|Bacteria,4NGIH@976|Bacteroidetes,47PB1@768503|Cytophagia	976|Bacteroidetes	C	Cytochrome C oxidase, cbb3-type, subunit III	-	-	1.8.2.2	ko:K19713	-	-	-	-	ko00000,ko01000	-	-	-	Cytochrom_C,Cytochrome_CBB3
BYD3_k127_2318970_41	504472.Slin_6293	1.61e-124	411.0	COG0438@1|root,COG0438@2|Bacteria,4NGU7@976|Bacteroidetes,47XD2@768503|Cytophagia	976|Bacteroidetes	M	Glycosyl transferase 4-like domain	-	-	-	ko:K03208	-	-	-	-	ko00000	-	GT4	-	Glyco_trans_1_4,Glyco_trans_4_4,Glyco_transf_4,Glycos_transf_1
BYD3_k127_2318970_18	1174528.JH992898_gene3803	1.529e-176	559.0	COG0451@1|root,COG0451@2|Bacteria,1G0IT@1117|Cyanobacteria	1117|Cyanobacteria	M	PFAM NAD dependent epimerase dehydratase family	-	-	5.1.3.10	ko:K12454	ko00520,map00520	-	R04266	RC00528	ko00000,ko00001,ko01000	-	-	-	Epimerase
BYD3_k127_2318970_37	1313421.JHBV01000020_gene5268	7.688e-128	419.0	COG0644@1|root,COG0644@2|Bacteria,4NKR8@976|Bacteroidetes	976|Bacteroidetes	C	TIGRFAM geranylgeranyl reductase family	-	-	-	-	-	-	-	-	-	-	-	-	FAD_binding_3,Trp_halogenase
BYD3_k127_2318970_46	641524.ADICYQ_4163	1.969e-110	366.0	COG2159@1|root,COG2159@2|Bacteria,4NK6T@976|Bacteroidetes,47MSC@768503|Cytophagia	976|Bacteroidetes	S	Amidohydrolase	-	-	-	ko:K07045	-	-	-	-	ko00000	-	-	-	Amidohydro_2
BYD3_k127_2318970_24	1123248.KB893381_gene965	6.468e-161	512.0	COG1250@1|root,COG1250@2|Bacteria,4NGU8@976|Bacteroidetes,1IP70@117747|Sphingobacteriia	976|Bacteroidetes	I	3-hydroxyacyl-CoA dehydrogenase	-	-	1.1.1.157	ko:K00074	ko00360,ko00362,ko00650,ko01100,ko01120,map00360,map00362,map00650,map01100,map01120	-	R01976,R05576,R06941	RC00029,RC00117	ko00000,ko00001,ko01000	-	-	-	3HCDH,3HCDH_N
BYD3_k127_2318970_84	1288963.ADIS_2406	7.644e-37	144.0	COG4319@1|root,COG4319@2|Bacteria,4NYPP@976|Bacteroidetes	976|Bacteroidetes	S	Domain of unknown function (DUF4440)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4440
BYD3_k127_2318970_97	1185876.BN8_01411	2.173e-25	108.0	COG1695@1|root,COG1695@2|Bacteria,4NRBC@976|Bacteroidetes,47QRE@768503|Cytophagia	976|Bacteroidetes	K	Transcriptional regulator PadR-like family	-	-	-	-	-	-	-	-	-	-	-	-	PadR
BYD3_k127_2318970_45	1123277.KB893174_gene5903	2.047e-113	387.0	COG0577@1|root,COG0577@2|Bacteria,4NDW7@976|Bacteroidetes,47N35@768503|Cytophagia	976|Bacteroidetes	V	FtsX-like permease family	-	-	-	-	-	-	-	-	-	-	-	-	FtsX,MacB_PCD
BYD3_k127_2320874_24	861299.J421_1886	1.069e-56	205.0	COG1960@1|root,COG1960@2|Bacteria	2|Bacteria	I	acyl-CoA dehydrogenase activity	-	-	1.14.13.235	ko:K22027	-	-	-	-	ko00000,ko01000	-	-	-	Acyl-CoA_dh_2,Acyl-CoA_dh_N
BYD3_k127_2320874_23	1121373.KB903662_gene115	5.469e-61	214.0	COG2318@1|root,COG2318@2|Bacteria,4NREM@976|Bacteroidetes,47VNE@768503|Cytophagia	976|Bacteroidetes	S	DinB family	-	-	-	-	-	-	-	-	-	-	-	-	DinB_2
BYD3_k127_2320874_18	1123278.KB893581_gene961	5.771e-71	247.0	COG0388@1|root,COG0388@2|Bacteria,4NEHF@976|Bacteroidetes,47PKQ@768503|Cytophagia	976|Bacteroidetes	S	Carbon-nitrogen hydrolase	-	-	-	-	-	-	-	-	-	-	-	-	Acetyltransf_1,CN_hydrolase
BYD3_k127_2320874_28	1430440.MGMSRv2_0733	1.156e-40	170.0	COG2114@1|root,COG2114@2|Bacteria,1R86S@1224|Proteobacteria,2U57P@28211|Alphaproteobacteria	28211|Alphaproteobacteria	T	Pfam Adenylate and Guanylate cyclase catalytic domain	-	-	-	-	-	-	-	-	-	-	-	-	DUF4071,Guanylate_cyc
BYD3_k127_2320874_6	1237149.C900_02559	6.646e-179	574.0	COG1626@1|root,COG1626@2|Bacteria,4NFJW@976|Bacteroidetes,47JY4@768503|Cytophagia	976|Bacteroidetes	G	PFAM Glycoside hydrolase, family 37	-	-	3.2.1.28	ko:K01194	ko00500,ko01100,map00500,map01100	-	R00010	RC00049	ko00000,ko00001,ko00537,ko01000	-	GH37	-	Trehalase
BYD3_k127_2320874_9	1189612.A33Q_1180	3.545e-128	418.0	COG1262@1|root,COG1262@2|Bacteria,4NFR2@976|Bacteroidetes,47KU9@768503|Cytophagia	976|Bacteroidetes	S	Sulfatase-modifying factor enzyme 1	-	-	1.8.3.7	ko:K13444	ko04142,map04142	-	-	-	ko00000,ko00001,ko01000	-	-	-	FGE-sulfatase
BYD3_k127_2320874_0	926556.Echvi_4039	0.0	1248.0	COG1048@1|root,COG1048@2|Bacteria,4NDZT@976|Bacteroidetes,47NMT@768503|Cytophagia	976|Bacteroidetes	C	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate	acnA	-	4.2.1.3	ko:K01681	ko00020,ko00630,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01210,ko01230,map00020,map00630,map00720,map01100,map01110,map01120,map01130,map01200,map01210,map01230	M00009,M00010,M00012,M00173,M00740	R01324,R01325,R01900	RC00497,RC00498,RC00618	br01601,ko00000,ko00001,ko00002,ko01000	-	-	-	Aconitase,Aconitase_C
BYD3_k127_2320874_20	1144313.PMI10_01165	9.011e-70	238.0	COG0784@1|root,COG0784@2|Bacteria,4NP6E@976|Bacteroidetes,1ICYK@117743|Flavobacteriia,2NW5X@237|Flavobacterium	976|Bacteroidetes	T	cheY-homologous receiver domain	-	-	-	-	-	-	-	-	-	-	-	-	Response_reg
BYD3_k127_2320874_37	1121373.KB903627_gene2953	3.976e-06	53.0	COG0745@1|root,COG0745@2|Bacteria,4NXE8@976|Bacteroidetes,47RYQ@768503|Cytophagia	976|Bacteroidetes	T	cheY-homologous receiver domain	-	-	-	-	-	-	-	-	-	-	-	-	Response_reg
BYD3_k127_2320874_22	1123248.KB893337_gene2497	4.092e-65	228.0	COG3685@1|root,COG3685@2|Bacteria,4NN8V@976|Bacteroidetes,1IRV4@117747|Sphingobacteriia	976|Bacteroidetes	S	Domain of unknown function (DUF892)	-	-	-	-	-	-	-	-	-	-	-	-	DUF892
BYD3_k127_2320874_4	1453505.JASY01000001_gene3623	1.324e-233	761.0	COG1352@1|root,COG2201@1|root,COG4251@1|root,COG1352@2|Bacteria,COG2201@2|Bacteria,COG4251@2|Bacteria,4NE3J@976|Bacteroidetes,1HWYQ@117743|Flavobacteriia,2NU86@237|Flavobacterium	976|Bacteroidetes	T	COG2201 Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain	-	-	2.1.1.80,3.1.1.61	ko:K13924	ko02020,ko02030,map02020,map02030	M00506	-	-	ko00000,ko00001,ko00002,ko01000,ko02022,ko02035	-	-	-	CheB_methylest,CheR,CheR_N,GAF,HATPase_c,HisKA,PAS,PAS_10,PAS_3,PAS_4,PAS_9
BYD3_k127_2320874_3	929556.Solca_0522	1.229e-255	796.0	COG1032@1|root,COG1032@2|Bacteria,4PHMM@976|Bacteroidetes,1IWI2@117747|Sphingobacteriia	976|Bacteroidetes	C	radical SAM domain protein	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_2320874_25	1270193.JARP01000001_gene2250	4.004e-52	192.0	2C6BU@1|root,32S87@2|Bacteria,4NRX1@976|Bacteroidetes,1I6S7@117743|Flavobacteriia,2NYWP@237|Flavobacterium	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_2320874_7	926549.KI421517_gene1242	6.865e-169	534.0	COG1741@1|root,COG1741@2|Bacteria,4NEV6@976|Bacteroidetes,47JT8@768503|Cytophagia	976|Bacteroidetes	S	Belongs to the pirin family	-	-	-	ko:K06911	-	-	-	-	ko00000	-	-	-	Pirin,Pirin_C
BYD3_k127_2320874_12	929562.Emtol_0764	2.377e-98	329.0	COG0697@1|root,COG0697@2|Bacteria,4NGJR@976|Bacteroidetes,47PYM@768503|Cytophagia	976|Bacteroidetes	EG	EamA-like transporter family	-	-	-	-	-	-	-	-	-	-	-	-	EamA
BYD3_k127_2320874_8	1123248.KB893337_gene2378	4.293e-133	429.0	COG1082@1|root,COG1082@2|Bacteria,4NJJZ@976|Bacteroidetes,1IQTR@117747|Sphingobacteriia	976|Bacteroidetes	G	PFAM Xylose	-	-	-	-	-	-	-	-	-	-	-	-	AP_endonuc_2
BYD3_k127_2320874_1	929556.Solca_1053	0.0	1234.0	COG0247@1|root,COG0277@1|root,COG0479@1|root,COG0247@2|Bacteria,COG0277@2|Bacteria,COG0479@2|Bacteria,4NEK3@976|Bacteroidetes,1INMR@117747|Sphingobacteriia	976|Bacteroidetes	C	FAD linked oxidases, C-terminal domain	-	-	-	ko:K18930	-	-	-	-	ko00000	-	-	-	CCG,FAD-oxidase_C,FAD_binding_4,Fer4_17,Fer4_7,Fer4_8
BYD3_k127_2320874_26	760192.Halhy_6268	5.591e-52	189.0	2BGPZ@1|root,32ANW@2|Bacteria,4NQPT@976|Bacteroidetes	976|Bacteroidetes	S	DinB superfamily	-	-	-	-	-	-	-	-	-	-	-	-	DinB_2
BYD3_k127_2320874_34	1122179.KB890480_gene3150	2.849e-20	91.0	295U4@1|root,2ZT58@2|Bacteria,4PQ2P@976|Bacteroidetes	976|Bacteroidetes	S	Protein of unknown function (DUF1059)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1059
BYD3_k127_2320874_36	1236514.BAKL01000058_gene3973	1.312e-06	55.0	COG1629@1|root,COG4771@2|Bacteria,4NDU8@976|Bacteroidetes,2FMRZ@200643|Bacteroidia,4AKS4@815|Bacteroidaceae	976|Bacteroidetes	P	TonB-linked outer membrane protein, SusC RagA family	-	-	-	-	-	-	-	-	-	-	-	-	CarbopepD_reg_2,Plug,STN,TonB_dep_Rec
BYD3_k127_2320874_31	926560.KE387023_gene2058	9.626e-34	135.0	COG2020@1|root,COG2020@2|Bacteria	2|Bacteria	O	methyltransferase activity	-	-	-	-	-	-	-	-	-	-	-	-	PEMT
BYD3_k127_2320874_32	1121931.AUHG01000004_gene922	1.618e-33	135.0	COG3779@1|root,COG3779@2|Bacteria,4NSS5@976|Bacteroidetes,1I437@117743|Flavobacteriia	976|Bacteroidetes	S	Uncharacterized protein conserved in bacteria (DUF2314)	-	-	-	-	-	-	-	-	-	-	-	-	DUF2314
BYD3_k127_2320874_27	700598.Niako_3472	3.96e-49	178.0	COG0640@1|root,COG0640@2|Bacteria,4NSDX@976|Bacteroidetes,1IXWT@117747|Sphingobacteriia	976|Bacteroidetes	K	PFAM Bacterial regulatory protein, arsR family	-	-	-	-	-	-	-	-	-	-	-	-	HTH_20
BYD3_k127_2320874_15	153721.MYP_2689	1.083e-83	288.0	COG2764@1|root,COG3832@1|root,COG2764@2|Bacteria,COG3832@2|Bacteria,4NFVK@976|Bacteroidetes,47MD3@768503|Cytophagia	976|Bacteroidetes	S	Activator of Hsp90 ATPase homolog 1-like protein	-	-	-	-	-	-	-	-	-	-	-	-	3-dmu-9_3-mt,AHSA1
BYD3_k127_2320874_29	880070.Cycma_4441	7.796e-40	162.0	COG2114@1|root,COG2114@2|Bacteria,4NKWT@976|Bacteroidetes,47XVT@768503|Cytophagia	976|Bacteroidetes	T	Protein of unknown function (DUF2652)	-	-	-	-	-	-	-	-	-	-	-	-	DUF2652
BYD3_k127_2320874_11	1122621.ATZA01000031_gene2956	1.789e-101	334.0	COG2318@1|root,COG2318@2|Bacteria,4NMJ9@976|Bacteroidetes,1IRU4@117747|Sphingobacteriia	976|Bacteroidetes	S	Protein of unknown function (DUF1572)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1572
BYD3_k127_2320874_13	1499689.CCNN01000007_gene2677	6.654e-88	300.0	COG1234@1|root,COG1234@2|Bacteria,1TVEQ@1239|Firmicutes,24FE1@186801|Clostridia	186801|Clostridia	S	Metallo-beta-lactamase superfamily	-	-	-	-	-	-	-	-	-	-	-	-	Lactamase_B_2
BYD3_k127_2320874_33	866536.Belba_1265	4.076e-27	116.0	arCOG13956@1|root,33BWW@2|Bacteria,4P4JQ@976|Bacteroidetes	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_2320874_16	682795.AciX8_4109	3.584e-80	282.0	COG4299@1|root,COG4299@2|Bacteria,3Y6D6@57723|Acidobacteria,2JM33@204432|Acidobacteriia	204432|Acidobacteriia	S	Domain of unknown function (DUF5009)	-	-	-	-	-	-	-	-	-	-	-	-	DUF5009
BYD3_k127_2320874_17	509635.N824_01270	5.522e-78	269.0	2CDZ7@1|root,2Z8VK@2|Bacteria,4NIYY@976|Bacteroidetes,1IXMQ@117747|Sphingobacteriia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_2320874_14	1185876.BN8_00627	7.38e-87	299.0	COG2267@1|root,COG2267@2|Bacteria,4PKRM@976|Bacteroidetes,47RJ0@768503|Cytophagia	976|Bacteroidetes	I	Serine aminopeptidase, S33	-	-	-	-	-	-	-	-	-	-	-	-	Abhydrolase_1,Hydrolase_4
BYD3_k127_2320874_19	1449076.JOOE01000002_gene835	8.611e-70	246.0	COG2159@1|root,COG2159@2|Bacteria,1Q704@1224|Proteobacteria,2VD3Z@28211|Alphaproteobacteria,2K7IV@204457|Sphingomonadales	204457|Sphingomonadales	S	Amidohydrolase	-	-	-	-	-	-	-	-	-	-	-	-	Amidohydro_2
BYD3_k127_2320874_30	237368.SCABRO_03886	2.963e-35	140.0	2CCSR@1|root,32RWC@2|Bacteria,2J1M5@203682|Planctomycetes	203682|Planctomycetes	S	23S rRNA-intervening sequence protein	-	-	-	-	-	-	-	-	-	-	-	-	23S_rRNA_IVP
BYD3_k127_2320874_2	861299.J421_0317	0.0	1117.0	28JZZ@1|root,2Z9PZ@2|Bacteria	2|Bacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_2320874_10	1380390.JIAT01000009_gene1363	1.487e-119	396.0	COG0654@1|root,COG0654@2|Bacteria,2I2TH@201174|Actinobacteria,4CU4I@84995|Rubrobacteria	84995|Rubrobacteria	CH	FAD binding domain	-	-	-	-	-	-	-	-	-	-	-	-	FAD_binding_3
BYD3_k127_2320874_5	1121904.ARBP01000002_gene7252	1.488e-208	676.0	COG0577@1|root,COG0577@2|Bacteria,4NDUK@976|Bacteroidetes,47JJN@768503|Cytophagia	976|Bacteroidetes	V	FtsX-like permease family	-	-	-	ko:K02004	-	M00258	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	FtsX,MacB_PCD
BYD3_k127_2320874_21	1185876.BN8_05038	2.743e-68	235.0	2AYX9@1|root,31R2Z@2|Bacteria,4NNS4@976|Bacteroidetes,47RDY@768503|Cytophagia	976|Bacteroidetes	S	DinB superfamily	-	-	-	-	-	-	-	-	-	-	-	-	DinB_2
BYD3_k127_2320874_35	1185876.BN8_04395	1.383e-14	85.0	2AB14@1|root,310ER@2|Bacteria,4NNNB@976|Bacteroidetes,47Q4B@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_2339364_3	1237149.C900_05632	8.145e-181	588.0	COG1572@1|root,COG1572@2|Bacteria,4NFAX@976|Bacteroidetes,47K9M@768503|Cytophagia	976|Bacteroidetes	S	Peptidase family C25	-	-	-	-	-	-	-	-	-	-	-	-	CARDB,FlgD_ig,ILEI,Peptidase_C25
BYD3_k127_2339364_12	485918.Cpin_6557	2.646e-99	331.0	COG1246@1|root,COG1246@2|Bacteria,4NGXY@976|Bacteroidetes	976|Bacteroidetes	E	Acetyltransferase	-	-	-	-	-	-	-	-	-	-	-	-	Acetyltransf_1
BYD3_k127_2339364_1	700598.Niako_5689	3.848e-209	655.0	COG0137@1|root,COG0137@2|Bacteria,4NE3R@976|Bacteroidetes,1INXV@117747|Sphingobacteriia	976|Bacteroidetes	E	Belongs to the argininosuccinate synthase family. Type 1 subfamily	argG	-	6.3.4.5	ko:K01940	ko00220,ko00250,ko01100,ko01110,ko01130,ko01230,ko05418,map00220,map00250,map01100,map01110,map01130,map01230,map05418	M00029,M00844,M00845	R01954	RC00380,RC00629	ko00000,ko00001,ko00002,ko01000,ko04147	-	-	-	Arginosuc_synth
BYD3_k127_2339364_7	485918.Cpin_6555	8.71e-144	462.0	COG0002@1|root,COG0002@2|Bacteria,4NEQR@976|Bacteroidetes,1IPHE@117747|Sphingobacteriia	976|Bacteroidetes	E	Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde	argC	-	1.2.1.38	ko:K00145	ko00220,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map01100,map01110,map01130,map01210,map01230	M00028,M00845	R03443	RC00684	ko00000,ko00001,ko00002,ko01000	-	-	-	Semialdhyde_dh,Semialdhyde_dhC
BYD3_k127_2339364_17	762903.Pedsa_3189	1.001e-33	133.0	2DNS7@1|root,32YWC@2|Bacteria,4NSJ6@976|Bacteroidetes,1IY6V@117747|Sphingobacteriia	976|Bacteroidetes	J	23S rRNA-intervening sequence protein	-	-	-	-	-	-	-	-	-	-	-	-	23S_rRNA_IVP
BYD3_k127_2339364_5	313606.M23134_03525	2.87e-149	480.0	COG4992@1|root,COG4992@2|Bacteria,4NE0Z@976|Bacteroidetes,47JQP@768503|Cytophagia	976|Bacteroidetes	E	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family	argD	-	2.6.1.11,2.6.1.17	ko:K00821	ko00220,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00220,map00300,map01100,map01110,map01120,map01130,map01210,map01230	M00016,M00028,M00845	R02283,R04475	RC00006,RC00062	ko00000,ko00001,ko00002,ko01000,ko01007	-	-	-	Aminotran_3
BYD3_k127_2339364_4	700598.Niako_5692	9.653e-166	525.0	COG0078@1|root,COG0078@2|Bacteria,4NEYX@976|Bacteroidetes,1IQ2H@117747|Sphingobacteriia	976|Bacteroidetes	E	Belongs to the ATCase OTCase family	argF	GO:0000050,GO:0003674,GO:0003824,GO:0004585,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006591,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016740,GO:0016741,GO:0016743,GO:0019627,GO:0019752,GO:0034641,GO:0042450,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:0071941,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607	2.1.3.11,2.1.3.9	ko:K09065,ko:K13043	ko00220,ko01100,ko01230,map00220,map01100,map01230	M00845	R07245,R08937	RC00096	ko00000,ko00001,ko00002,ko01000	-	-	-	OTCace,OTCace_N
BYD3_k127_2339364_10	1123248.KB893386_gene1816	8.211e-105	347.0	COG0548@1|root,COG0548@2|Bacteria,4NDY8@976|Bacteroidetes,1IPBE@117747|Sphingobacteriia	976|Bacteroidetes	E	Belongs to the acetylglutamate kinase family. ArgB subfamily	argB	GO:0003674,GO:0003824,GO:0003991,GO:0005488,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016301,GO:0016310,GO:0016597,GO:0016740,GO:0016772,GO:0016774,GO:0019752,GO:0031406,GO:0034618,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0043177,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607	2.7.2.8	ko:K00930	ko00220,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map01100,map01110,map01130,map01210,map01230	M00028	R02649	RC00002,RC00043	ko00000,ko00001,ko00002,ko01000	-	-	-	AA_kinase
BYD3_k127_2339364_6	762903.Pedsa_3195	6.968e-146	469.0	COG0624@1|root,COG0624@2|Bacteria,4NE2G@976|Bacteroidetes,1IQBT@117747|Sphingobacteriia	976|Bacteroidetes	E	PFAM Peptidase family M20 M25 M40	argE	-	3.5.1.16	ko:K01438	ko00220,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map01100,map01110,map01130,map01210,map01230	M00028,M00845	R00669,R09107	RC00064,RC00300	ko00000,ko00001,ko00002,ko01000	-	-	-	M20_dimer,Peptidase_M20,Peptidase_M28
BYD3_k127_2339364_15	1443665.JACA01000024_gene3341	5.293e-48	178.0	COG1335@1|root,COG1335@2|Bacteria,4NP7C@976|Bacteroidetes,1I299@117743|Flavobacteriia,2YIF5@290174|Aquimarina	976|Bacteroidetes	Q	Isochorismatase family	-	-	-	-	-	-	-	-	-	-	-	-	Isochorismatase
BYD3_k127_2339364_2	485918.Cpin_6550	2.784e-204	643.0	COG0165@1|root,COG0165@2|Bacteria,4NFCY@976|Bacteroidetes,1INUE@117747|Sphingobacteriia	976|Bacteroidetes	E	argininosuccinate lyase	argH	GO:0003674,GO:0003824,GO:0004056,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006591,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016829,GO:0016840,GO:0016842,GO:0019752,GO:0042450,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607	4.3.2.1	ko:K01755	ko00220,ko00250,ko01100,ko01110,ko01130,ko01230,map00220,map00250,map01100,map01110,map01130,map01230	M00029,M00844,M00845	R01086	RC00445,RC00447	ko00000,ko00001,ko00002,ko01000,ko04147	-	-	-	Lyase_1
BYD3_k127_2339364_8	1237149.C900_01356	4.088e-133	435.0	COG0477@1|root,COG2814@2|Bacteria,4PKJD@976|Bacteroidetes,47M36@768503|Cytophagia	976|Bacteroidetes	EGP	PFAM nucleoside H symporter	-	-	-	-	-	-	-	-	-	-	-	-	Nuc_H_symport
BYD3_k127_2339364_11	1333523.L593_06520	1.741e-102	344.0	COG1082@1|root,arCOG01900@2157|Archaea	2157|Archaea	G	PFAM Xylose isomerase domain protein TIM barrel	-	-	-	-	-	-	-	-	-	-	-	-	AP_endonuc_2
BYD3_k127_2339364_9	1123248.KB893328_gene937	2.803e-115	377.0	COG1082@1|root,COG1082@2|Bacteria,4NG1K@976|Bacteroidetes,1IQA4@117747|Sphingobacteriia	976|Bacteroidetes	G	Xylose isomerase-like TIM barrel	-	-	-	-	-	-	-	-	-	-	-	-	AP_endonuc_2
BYD3_k127_2339364_0	388413.ALPR1_19928	2.24e-210	665.0	COG0673@1|root,COG0673@2|Bacteria,4NEN5@976|Bacteroidetes,47JNX@768503|Cytophagia	976|Bacteroidetes	S	PFAM Oxidoreductase family, NAD-binding Rossmann fold	-	-	-	-	-	-	-	-	-	-	-	-	GFO_IDH_MocA
BYD3_k127_2339364_16	1202532.FF52_04520	1.009e-41	157.0	COG0764@1|root,COG0764@2|Bacteria,4NUEU@976|Bacteroidetes,1IMZN@117743|Flavobacteriia,2NWQ7@237|Flavobacterium	976|Bacteroidetes	I	dehydratase	-	-	4.2.1.59	ko:K02372	ko00061,ko00780,ko01100,ko01212,map00061,map00780,map01100,map01212	M00083,M00572	R04428,R04535,R04537,R04544,R04568,R04954,R04965,R07764,R10117,R10121	RC00831,RC01095	ko00000,ko00001,ko00002,ko01000,ko01004	-	-	-	FabA
BYD3_k127_2339364_14	761193.Runsl_3430	1.256e-73	252.0	COG0457@1|root,COG0457@2|Bacteria,4NQ40@976|Bacteroidetes,47PSE@768503|Cytophagia	976|Bacteroidetes	S	Protein of unknown function (DUF2911)	-	-	-	-	-	-	-	-	-	-	-	-	DUF2911
BYD3_k127_2339364_13	929562.Emtol_2852	1.356e-86	290.0	COG0526@1|root,COG1225@1|root,COG0526@2|Bacteria,COG1225@2|Bacteria,4NMEK@976|Bacteroidetes,47K5E@768503|Cytophagia	976|Bacteroidetes	CO	Redoxin	-	-	-	-	-	-	-	-	-	-	-	-	AhpC-TSA,Redoxin
BYD3_k127_2351342_0	1235803.C825_02363	0.0	1211.0	COG3408@1|root,COG3408@2|Bacteria,4NESP@976|Bacteroidetes	976|Bacteroidetes	G	Alpha-L-rhamnosidase N-terminal domain	-	-	3.2.1.40	ko:K05989	-	-	-	-	ko00000,ko01000	-	-	-	Bac_rhamnosid,Bac_rhamnosid6H,Bac_rhamnosid_C,Bac_rhamnosid_N
BYD3_k127_2351342_24	1123248.KB893319_gene3988	7.959e-86	300.0	COG2267@1|root,COG2267@2|Bacteria,4NH5A@976|Bacteroidetes	976|Bacteroidetes	I	Alpha/beta hydrolase family	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_2351342_2	926549.KI421517_gene1652	5.63e-322	997.0	COG5512@1|root,COG5512@2|Bacteria	2|Bacteria	L	Zn-ribbon-containing possibly RNA-binding protein and truncated derivatives	-	-	2.7.7.7	ko:K02343	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	M00260	R00375,R00376,R00377,R00378	RC02795	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	-	-	-	DUF4038,DUF5060,DUF721
BYD3_k127_2351342_6	1237149.C900_02538	1.786e-211	673.0	COG0508@1|root,COG0508@2|Bacteria,4PKNP@976|Bacteroidetes,47MW8@768503|Cytophagia	976|Bacteroidetes	C	Domain of Unknown Function (DUF349)	-	-	-	-	-	-	-	-	-	-	-	-	DUF349
BYD3_k127_2351342_30	1237149.C900_02539	1.061e-75	258.0	COG1678@1|root,COG1678@2|Bacteria,4NFQA@976|Bacteroidetes,47M9N@768503|Cytophagia	976|Bacteroidetes	K	Belongs to the UPF0301 (AlgH) family	-	-	-	ko:K07735	-	-	-	-	ko00000,ko03000	-	-	-	DUF179
BYD3_k127_2351342_31	1237149.C900_02541	5.057e-75	257.0	COG0259@1|root,COG0259@2|Bacteria,4NFH7@976|Bacteroidetes,47P7A@768503|Cytophagia	976|Bacteroidetes	H	Catalyzes the oxidation of either pyridoxine 5'- phosphate (PNP) or pyridoxamine 5'-phosphate (PMP) into pyridoxal 5'-phosphate (PLP)	pdxH	-	1.4.3.5	ko:K00275	ko00750,ko01100,ko01120,map00750,map01100,map01120	M00124	R00277,R00278,R01710,R01711	RC00048,RC00116	ko00000,ko00001,ko00002,ko01000	-	-	-	PNP_phzG_C,Putative_PNPOx
BYD3_k127_2351342_20	1124780.ANNU01000002_gene1617	2.129e-101	336.0	COG2120@1|root,COG2120@2|Bacteria,4NEDJ@976|Bacteroidetes,47K51@768503|Cytophagia	976|Bacteroidetes	S	PFAM GlcNAc-PI de-N-acetylase	bshB1	-	-	ko:K01463	-	-	-	-	ko00000,ko01000	-	-	-	PIG-L
BYD3_k127_2351342_14	1237149.C900_04237	1.275e-155	496.0	COG0492@1|root,COG0492@2|Bacteria,4NEVX@976|Bacteroidetes,47JQX@768503|Cytophagia	976|Bacteroidetes	C	Thioredoxin reductase	trxB	-	1.8.1.9	ko:K00384	ko00450,map00450	-	R02016,R03596,R09372	RC00013,RC02518,RC02873	ko00000,ko00001,ko01000	-	-	-	Pyr_redox_2
BYD3_k127_2351342_12	1237149.C900_04236	3.682e-169	533.0	COG0568@1|root,COG0568@2|Bacteria,4NEBF@976|Bacteroidetes,47JZ7@768503|Cytophagia	976|Bacteroidetes	K	Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released	rpoD	-	-	ko:K03086	-	-	-	-	ko00000,ko03021	-	-	-	Sigma70_r1_2,Sigma70_r2,Sigma70_r3,Sigma70_r4
BYD3_k127_2351342_1	1237149.C900_04235	0.0	1060.0	COG1185@1|root,COG1185@2|Bacteria,4NE4Q@976|Bacteroidetes,47KTE@768503|Cytophagia	976|Bacteroidetes	J	Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction	pnp	-	2.7.7.8	ko:K00962	ko00230,ko00240,ko03018,map00230,map00240,map03018	M00394	R00437,R00438,R00439,R00440	RC02795	ko00000,ko00001,ko00002,ko01000,ko03016,ko03019	-	-	-	KH_1,PNPase,RNase_PH,RNase_PH_C,S1
BYD3_k127_2351342_37	1237149.C900_04234	1.46e-35	137.0	COG0184@1|root,COG0184@2|Bacteria,4NS7U@976|Bacteroidetes,47R7H@768503|Cytophagia	976|Bacteroidetes	J	Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome	rpsO	GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015935,GO:0022626,GO:0022627,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904	-	ko:K02956	ko03010,map03010	M00178,M00179	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_S15
BYD3_k127_2351342_11	1237149.C900_04233	1.991e-170	552.0	COG0795@1|root,COG0795@2|Bacteria,4NE8B@976|Bacteroidetes,47JCU@768503|Cytophagia	976|Bacteroidetes	S	Permease YjgP YjgQ family	-	-	-	ko:K07091	ko02010,map02010	M00320	-	-	ko00000,ko00001,ko00002,ko02000	1.B.42.1	-	-	YjgP_YjgQ
BYD3_k127_2351342_33	1237149.C900_04232	3.935e-45	167.0	COG3832@1|root,COG3832@2|Bacteria,4NNY1@976|Bacteroidetes,47R94@768503|Cytophagia	976|Bacteroidetes	S	Pfam Activator of Hsp90 ATPase homolog 1-like protein	-	-	-	-	-	-	-	-	-	-	-	-	AHSA1
BYD3_k127_2351342_15	1121481.AUAS01000004_gene1409	5.749e-143	462.0	COG0673@1|root,COG0673@2|Bacteria,4NE75@976|Bacteroidetes,47K0H@768503|Cytophagia	976|Bacteroidetes	S	Oxidoreductase family, NAD-binding Rossmann fold	gfo	-	1.1.99.28	ko:K00118	-	-	-	-	ko00000,ko01000	-	-	-	GFO_IDH_MocA,GFO_IDH_MocA_C
BYD3_k127_2351342_27	616991.JPOO01000003_gene1499	7.803e-80	269.0	COG2514@1|root,COG2514@2|Bacteria,4NMJC@976|Bacteroidetes,1I2B2@117743|Flavobacteriia	976|Bacteroidetes	S	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily	catE	-	1.13.11.2	ko:K07104	ko00361,ko00362,ko00622,ko00643,ko01100,ko01120,ko01220,map00361,map00362,map00622,map00643,map01100,map01120,map01220	M00569	R00816,R04089,R05295,R05404,R05406,R07795	RC00387,RC00643,RC01075,RC01364,RC01914	ko00000,ko00001,ko00002,ko01000	-	-	-	Glyoxalase
BYD3_k127_2351342_44	1168034.FH5T_14490	5.289e-08	55.0	COG0027@1|root,COG0027@2|Bacteria,4PKAW@976|Bacteroidetes,2FMB2@200643|Bacteroidia	976|Bacteroidetes	F	Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate	purT	-	2.1.2.2	ko:K08289	ko00230,ko00670,ko01100,ko01110,ko01130,map00230,map00670,map01100,map01110,map01130	M00048	R04325,R04326	RC00026,RC00197,RC01128	ko00000,ko00001,ko00002,ko01000	-	-	-	ATP-grasp,Epimerase
BYD3_k127_2351342_43	225937.HP15_1245	1.271e-14	74.0	COG0027@1|root,COG0027@2|Bacteria,1N3KA@1224|Proteobacteria,1RNTW@1236|Gammaproteobacteria,465GE@72275|Alteromonadaceae	1236|Gammaproteobacteria	F	Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate	purT	GO:0003674,GO:0003824,GO:0004644,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008776,GO:0009058,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016741,GO:0016742,GO:0016772,GO:0016774,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576	2.1.2.2	ko:K08289	ko00230,ko00670,ko01100,ko01110,ko01130,map00230,map00670,map01100,map01110,map01130	M00048	R04325,R04326	RC00026,RC00197,RC01128	ko00000,ko00001,ko00002,ko01000	-	-	iSDY_1059.SDY_1135	ATP-grasp,Epimerase
BYD3_k127_2351342_40	1341181.FLJC2902T_26930	2.029e-24	108.0	COG2197@1|root,COG2197@2|Bacteria,4PKIY@976|Bacteroidetes,1IJAH@117743|Flavobacteriia	976|Bacteroidetes	T	cheY-homologous receiver domain	-	-	-	-	-	-	-	-	-	-	-	-	Response_reg
BYD3_k127_2351342_32	1237149.C900_00075	2.053e-54	208.0	COG4251@1|root,COG4251@2|Bacteria	2|Bacteria	T	photoreceptor activity	-	-	-	-	-	-	-	-	-	-	-	-	HATPase_c,HisKA,PAS_3,PAS_9,Reg_prop,Response_reg,Y_Y_Y
BYD3_k127_2351342_22	509635.N824_19070	8.761e-91	310.0	COG0451@1|root,COG0451@2|Bacteria,4NEMN@976|Bacteroidetes,1IQN9@117747|Sphingobacteriia	976|Bacteroidetes	M	PFAM NAD dependent epimerase dehydratase family	dfrA	-	1.1.1.219	ko:K00091	-	-	-	-	ko00000,ko01000	-	-	-	Epimerase
BYD3_k127_2351342_5	760192.Halhy_5983	2.232e-235	737.0	COG3525@1|root,COG3525@2|Bacteria,4NE08@976|Bacteroidetes,1IPND@117747|Sphingobacteriia	976|Bacteroidetes	G	Glycosyl hydrolase family 20, catalytic domain	-	-	3.2.1.52	ko:K12373	ko00511,ko00513,ko00520,ko00531,ko00603,ko00604,ko01100,ko04142,map00511,map00513,map00520,map00531,map00603,map00604,map01100,map04142	M00079	R00022,R06004,R11316	RC00049	ko00000,ko00001,ko00002,ko01000,ko03110	-	GH20	-	CHB_HEX_C_1,Glyco_hydro_20,Glyco_hydro_20b
BYD3_k127_2351342_35	1185876.BN8_04399	1.543e-38	154.0	2EQ5P@1|root,33HRZ@2|Bacteria,4NZ9H@976|Bacteroidetes,47U7J@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_2351342_26	272134.KB731324_gene3751	1.14e-83	287.0	COG2162@1|root,COG2162@2|Bacteria,1G3CG@1117|Cyanobacteria,1HA7I@1150|Oscillatoriales	1117|Cyanobacteria	Q	N-acetyltransferase	-	-	2.3.1.118	ko:K00675	-	-	-	-	ko00000,ko01000	-	-	-	Acetyltransf_2
BYD3_k127_2351342_21	1144313.PMI10_01440	3.515e-95	319.0	COG0300@1|root,COG0300@2|Bacteria,4NKNE@976|Bacteroidetes,1IMIN@117743|Flavobacteriia,2NTWH@237|Flavobacterium	976|Bacteroidetes	S	Belongs to the short-chain dehydrogenases reductases (SDR) family	-	-	-	ko:K07124	-	-	-	-	ko00000	-	-	-	adh_short
BYD3_k127_2351342_23	471854.Dfer_5273	2.021e-88	304.0	COG3214@1|root,COG3214@2|Bacteria,4NGF2@976|Bacteroidetes,47MWM@768503|Cytophagia	976|Bacteroidetes	S	Winged helix DNA-binding domain	-	-	-	-	-	-	-	-	-	-	-	-	HTH_42
BYD3_k127_2351342_3	1120968.AUBX01000010_gene919	1.404e-281	891.0	COG0577@1|root,COG0577@2|Bacteria,4NDUK@976|Bacteroidetes,47JJN@768503|Cytophagia	976|Bacteroidetes	V	FtsX-like permease family	-	-	-	ko:K02004	-	M00258	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	FtsX,MacB_PCD
BYD3_k127_2351342_34	1237149.C900_04653	8.638e-41	153.0	COG1695@1|root,COG1695@2|Bacteria,4NQBA@976|Bacteroidetes	976|Bacteroidetes	K	transcriptional regulator	-	-	-	-	-	-	-	-	-	-	-	-	PadR
BYD3_k127_2351342_13	935557.ATYB01000009_gene626	5.024e-166	533.0	COG1858@1|root,COG1858@2|Bacteria,1N4E1@1224|Proteobacteria,2V011@28211|Alphaproteobacteria,4BFYR@82115|Rhizobiaceae	28211|Alphaproteobacteria	P	Cytochrome c	-	-	-	-	-	-	-	-	-	-	-	-	Cytochrom_C
BYD3_k127_2351342_38	700598.Niako_1661	1.345e-33	134.0	COG2259@1|root,33816@2|Bacteria,4NUVH@976|Bacteroidetes	976|Bacteroidetes	S	DoxX-like family	-	-	-	-	-	-	-	-	-	-	-	-	DoxX_2
BYD3_k127_2351342_25	760192.Halhy_1750	1.077e-84	295.0	COG2267@1|root,COG2267@2|Bacteria	2|Bacteria	I	carboxylic ester hydrolase activity	-	-	-	-	-	-	-	-	-	-	-	-	Abhydrolase_1
BYD3_k127_2351342_18	886377.Murru_3014	1.314e-114	374.0	COG3000@1|root,COG3000@2|Bacteria,4NI62@976|Bacteroidetes,1I9FZ@117743|Flavobacteriia	976|Bacteroidetes	I	Fatty acid hydroxylase superfamily	-	-	-	-	-	-	-	-	-	-	-	-	FA_hydroxylase
BYD3_k127_2351342_16	1250232.JQNJ01000001_gene3217	4.272e-141	468.0	COG0457@1|root,COG5616@1|root,COG0457@2|Bacteria,COG5616@2|Bacteria	2|Bacteria	S	cAMP biosynthetic process	pelC	-	-	ko:K21008	ko02025,map02025	-	-	-	ko00000,ko00001	-	-	-	LpoB
BYD3_k127_2351342_7	1237149.C900_01904	4.943e-206	662.0	COG0642@1|root,COG2205@2|Bacteria,4NTSQ@976|Bacteroidetes	976|Bacteroidetes	T	His Kinase A (phosphoacceptor) domain	-	-	-	-	-	-	-	-	-	-	-	-	HATPase_c
BYD3_k127_2351342_9	1237149.C900_01903	1.375e-173	560.0	COG0457@1|root,COG0457@2|Bacteria	1237149.C900_01903|-	S	peptidyl-tyrosine sulfation	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_2351342_19	1237149.C900_01902	6.365e-107	355.0	COG0226@1|root,COG0226@2|Bacteria,4PKGM@976|Bacteroidetes	976|Bacteroidetes	P	Type IX secretion system membrane protein PorP/SprF	-	-	-	-	-	-	-	-	-	-	-	-	PorP_SprF
BYD3_k127_2351342_10	643867.Ftrac_0359	6.08e-172	571.0	COG3391@1|root,COG5644@1|root,COG3391@2|Bacteria,COG5644@2|Bacteria,4PMIF@976|Bacteroidetes	976|Bacteroidetes	E	chlorophyll binding	-	-	-	-	-	-	-	-	-	-	-	-	HYR,Laminin_G_3
BYD3_k127_2351342_8	929562.Emtol_3160	1.167e-178	571.0	COG0277@1|root,COG0277@2|Bacteria,4NGC5@976|Bacteroidetes,47MIC@768503|Cytophagia	976|Bacteroidetes	C	D-arabinono-1,4-lactone oxidase	-	-	1.1.3.41	ko:K00594	ko00040,ko00051,ko01100,map00040,map00051,map01100	-	R07152,R11620	RC00108,RC00133	ko00000,ko00001,ko01000	-	-	-	ALO,FAD_binding_4
BYD3_k127_2351342_42	1123234.AUKI01000011_gene1098	1.117e-19	92.0	COG3934@1|root,COG3934@2|Bacteria,4NFVS@976|Bacteroidetes,1HZVW@117743|Flavobacteriia	976|Bacteroidetes	G	Belongs to the glycosyl hydrolase 5 (cellulase A) family	-	-	-	-	-	-	-	-	-	-	-	-	Cellulase
BYD3_k127_2351342_41	866536.Belba_1570	9.227e-21	93.0	COG0745@1|root,COG2207@1|root,COG3292@1|root,COG5002@1|root,COG0745@2|Bacteria,COG2207@2|Bacteria,COG3292@2|Bacteria,COG5002@2|Bacteria,4P0IA@976|Bacteroidetes,47ND8@768503|Cytophagia	976|Bacteroidetes	T	Y_Y_Y domain	-	-	-	-	-	-	-	-	-	-	-	-	HATPase_c,HTH_18,HisKA,Reg_prop,Response_reg,Y_Y_Y
BYD3_k127_2351342_28	485918.Cpin_5554	2.427e-79	273.0	COG0657@1|root,COG0657@2|Bacteria,4NH62@976|Bacteroidetes,1IQ0H@117747|Sphingobacteriia	976|Bacteroidetes	I	COG0657 Esterase lipase	-	-	-	-	-	-	-	-	-	-	-	-	Abhydrolase_3,Peptidase_S9
BYD3_k127_2351342_29	761193.Runsl_3159	8.748e-77	267.0	COG2367@1|root,COG2367@2|Bacteria,4NE3C@976|Bacteroidetes,47M1M@768503|Cytophagia	976|Bacteroidetes	V	Beta-lactamase enzyme family	per1	-	3.5.2.6	ko:K17836	ko00311,ko01130,ko01501,map00311,map01130,map01501	M00627,M00628	R06363	RC01499	ko00000,ko00001,ko00002,ko01000,ko01504	-	-	-	Beta-lactamase2
BYD3_k127_2351342_17	1121904.ARBP01000015_gene179	2.299e-134	460.0	COG0577@1|root,COG0577@2|Bacteria,4NDUK@976|Bacteroidetes,47NTJ@768503|Cytophagia	976|Bacteroidetes	V	MacB-like periplasmic core domain	-	-	-	ko:K02004	-	M00258	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	FtsX,MacB_PCD
BYD3_k127_2351342_36	1121904.ARBP01000004_gene1023	2.366e-37	143.0	COG1695@1|root,COG1695@2|Bacteria,4NQJP@976|Bacteroidetes,47QWB@768503|Cytophagia	2|Bacteria	K	Transcriptional regulator PadR-like family	-	-	-	-	-	-	-	-	-	-	-	-	PadR
BYD3_k127_2351342_4	926549.KI421517_gene1787	1.048e-235	737.0	COG4948@1|root,COG4948@2|Bacteria,4NE9A@976|Bacteroidetes,47NDY@768503|Cytophagia	976|Bacteroidetes	M	Mandelate racemase / muconate lactonizing enzyme, N-terminal domain	-	-	-	-	-	-	-	-	-	-	-	-	MR_MLE_C,MR_MLE_N
BYD3_k127_2351790_0	1121904.ARBP01000005_gene4840	0.0	1390.0	COG1629@1|root,COG1629@2|Bacteria,4NDXS@976|Bacteroidetes,47KDP@768503|Cytophagia	976|Bacteroidetes	P	TonB dependent receptor	-	-	-	-	-	-	-	-	-	-	-	-	CarbopepD_reg_2,Plug,TonB_dep_Rec
BYD3_k127_2351790_5	1121904.ARBP01000005_gene4839	9.772e-240	752.0	COG1395@1|root,COG1395@2|Bacteria,4PMSD@976|Bacteroidetes,47Y95@768503|Cytophagia	976|Bacteroidetes	K	SusD family	-	-	-	ko:K21572	-	-	-	-	ko00000,ko02000	8.A.46.1,8.A.46.3	-	-	SusD-like_3,SusD_RagB
BYD3_k127_2351790_1	1189612.A33Q_3407	0.0	1330.0	COG4888@1|root,COG4888@2|Bacteria,4NEE8@976|Bacteroidetes,47JJ5@768503|Cytophagia	976|Bacteroidetes	S	ASPIC and UnbV	-	-	-	-	-	-	-	-	-	-	-	-	UnbV_ASPIC,VCBS
BYD3_k127_2351790_29	714943.Mucpa_4707	6.332e-101	338.0	COG1801@1|root,COG1801@2|Bacteria,4NHAD@976|Bacteroidetes,1IP8N@117747|Sphingobacteriia	976|Bacteroidetes	S	Protein of unknown function DUF72	-	-	-	-	-	-	-	-	-	-	-	-	DUF72
BYD3_k127_2351790_62	1278073.MYSTI_04041	3.362e-25	112.0	2DTU1@1|root,33MMF@2|Bacteria	2|Bacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_2351790_57	1237149.C900_03336	3.737e-41	153.0	COG1846@1|root,COG1846@2|Bacteria,4PKFS@976|Bacteroidetes,47V9T@768503|Cytophagia	976|Bacteroidetes	K	Winged helix DNA-binding domain	marR	-	-	-	-	-	-	-	-	-	-	-	HTH_34
BYD3_k127_2351790_60	1237149.C900_03337	7.599e-31	128.0	295IV@1|root,2ZSWC@2|Bacteria,4NVMA@976|Bacteroidetes,47W1I@768503|Cytophagia	976|Bacteroidetes	S	Psort location CytoplasmicMembrane, score	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_2351790_39	1237149.C900_03338	9.312e-79	268.0	COG0307@1|root,COG0307@2|Bacteria,4NHI8@976|Bacteroidetes,47TX8@768503|Cytophagia	976|Bacteroidetes	H	Lumazine binding domain	ribE	-	2.5.1.9	ko:K00793	ko00740,ko01100,ko01110,map00740,map01100,map01110	M00125	R00066	RC00958,RC00960	ko00000,ko00001,ko00002,ko01000	-	-	-	Lum_binding
BYD3_k127_2351790_61	700598.Niako_1972	7.706e-29	121.0	2E12W@1|root,32WIH@2|Bacteria,4NTHQ@976|Bacteroidetes,1IUNG@117747|Sphingobacteriia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	DUF937
BYD3_k127_2351790_49	1237149.C900_03339	3.776e-61	218.0	COG0671@1|root,COG0671@2|Bacteria,4NNVQ@976|Bacteroidetes,47RBP@768503|Cytophagia	976|Bacteroidetes	I	PFAM PAP2 superfamily	ybjG	GO:0003674,GO:0003824,GO:0005975,GO:0006629,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009605,GO:0009607,GO:0009987,GO:0016051,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0019637,GO:0042578,GO:0043207,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044403,GO:0044413,GO:0044415,GO:0044419,GO:0046467,GO:0046493,GO:0050896,GO:0051701,GO:0051704,GO:0051707,GO:0051832,GO:0051834,GO:0052173,GO:0052200,GO:0071704,GO:0075136,GO:0090407,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509	3.6.1.27	ko:K19302	ko00550,map00550	-	R05627	RC00002	ko00000,ko00001,ko01000,ko01011	-	-	-	PAP2
BYD3_k127_2351790_43	1279009.ADICEAN_02240	5.803e-70	261.0	COG4251@1|root,COG4251@2|Bacteria,4NFC3@976|Bacteroidetes,47JSC@768503|Cytophagia	976|Bacteroidetes	T	His Kinase A (phosphoacceptor) domain	-	-	-	-	-	-	-	-	-	-	-	-	GAF,GAF_2,HATPase_c,HisKA,PAS,PAS_3,PAS_4,PAS_9,Response_reg
BYD3_k127_2351790_4	1237149.C900_03312	8.579e-251	780.0	COG1249@1|root,COG1249@2|Bacteria,4NJ2P@976|Bacteroidetes,47NRN@768503|Cytophagia	976|Bacteroidetes	C	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain	-	-	1.8.1.4	ko:K00382	ko00010,ko00020,ko00260,ko00280,ko00620,ko00630,ko00640,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00020,map00260,map00280,map00620,map00630,map00640,map01100,map01110,map01120,map01130,map01200	M00009,M00011,M00036,M00307,M00532	R00209,R01221,R01698,R03815,R07618,R08549	RC00004,RC00022,RC00583,RC02742,RC02833,RC02834	br01601,ko00000,ko00001,ko00002,ko01000,ko04147	-	-	-	Pyr_redox_2,Pyr_redox_dim
BYD3_k127_2351790_17	1185876.BN8_02199	1.141e-141	459.0	2DBK2@1|root,2Z9Q1@2|Bacteria,4NET4@976|Bacteroidetes,47MUQ@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_2351790_36	1300143.CCAV010000004_gene2519	1.342e-85	286.0	COG1611@1|root,COG1611@2|Bacteria,4NGWU@976|Bacteroidetes,1I1G2@117743|Flavobacteriia,3ZQVG@59732|Chryseobacterium	976|Bacteroidetes	S	Belongs to the LOG family	yvdD	-	3.2.2.10	ko:K06966	ko00230,ko00240,map00230,map00240	-	R00182,R00510	RC00063,RC00318	ko00000,ko00001,ko01000	-	-	-	Lysine_decarbox
BYD3_k127_2351790_2	1237149.C900_01151	0.0	1270.0	COG0247@1|root,COG0277@1|root,COG0247@2|Bacteria,COG0277@2|Bacteria,4NEK3@976|Bacteroidetes,47JNC@768503|Cytophagia	976|Bacteroidetes	C	FAD linked oxidases, C-terminal domain	-	-	-	-	-	-	-	-	-	-	-	-	FAD-oxidase_C,FAD_binding_4,Fer4_17,Fer4_8
BYD3_k127_2351790_37	1189612.A33Q_2806	5.109e-82	277.0	COG0139@1|root,COG0140@1|root,COG0139@2|Bacteria,COG0140@2|Bacteria,4NERE@976|Bacteroidetes,47KYT@768503|Cytophagia	976|Bacteroidetes	E	Belongs to the PRA-CH family	hisI	-	3.5.4.19,3.6.1.31	ko:K11755	ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230	M00026	R04035,R04037	RC00002,RC01055	ko00000,ko00001,ko00002,ko01000	-	-	-	PRA-CH,PRA-PH
BYD3_k127_2351790_24	1237149.C900_03321	2.206e-117	381.0	COG0107@1|root,COG0107@2|Bacteria,4NE16@976|Bacteroidetes,47K9T@768503|Cytophagia	976|Bacteroidetes	E	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit	hisF	GO:0000107,GO:0003674,GO:0003824,GO:0016740,GO:0016757,GO:0016763	-	ko:K02500	ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230	M00026	R04558	RC00010,RC01190,RC01943	ko00000,ko00001,ko00002,ko01000	-	-	-	His_biosynth
BYD3_k127_2351790_54	1168034.FH5T_07125	1.16e-50	182.0	COG0614@1|root,COG0614@2|Bacteria,4NQQ6@976|Bacteroidetes,2FTW1@200643|Bacteroidia	976|Bacteroidetes	P	PD-(D/E)XK nuclease superfamily	-	-	-	-	-	-	-	-	-	-	-	-	PDDEXK_3
BYD3_k127_2351790_34	1237149.C900_03322	2.21e-93	312.0	COG0106@1|root,COG0106@2|Bacteria,4NEEX@976|Bacteroidetes,47M7D@768503|Cytophagia	976|Bacteroidetes	E	1-(5-phosphoribosyl)-5- (5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase	hisA	GO:0000105,GO:0000162,GO:0003674,GO:0003824,GO:0003949,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006547,GO:0006568,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009308,GO:0009309,GO:0009987,GO:0016053,GO:0016853,GO:0016860,GO:0016861,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0042401,GO:0042430,GO:0042435,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046219,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607	5.3.1.16	ko:K01814	ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230	M00026	R04640	RC00945	ko00000,ko00001,ko00002,ko01000	-	-	-	His_biosynth
BYD3_k127_2351790_41	435591.BDI_2016	1.865e-75	259.0	COG0118@1|root,COG0118@2|Bacteria,4NF4J@976|Bacteroidetes,2FPAY@200643|Bacteroidia,22XFN@171551|Porphyromonadaceae	976|Bacteroidetes	E	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR	hisH	-	-	ko:K02501	ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230	M00026	R04558	RC00010,RC01190,RC01943	ko00000,ko00001,ko00002,ko01000	-	-	-	GATase
BYD3_k127_2351790_10	1123008.KB905695_gene2618	1.019e-171	545.0	COG0131@1|root,COG0241@1|root,COG0131@2|Bacteria,COG0241@2|Bacteria,4NENP@976|Bacteroidetes,2FP1T@200643|Bacteroidia,22VYJ@171551|Porphyromonadaceae	976|Bacteroidetes	E	Histidine biosynthesis bifunctional protein HisB	hisB	GO:0000105,GO:0003674,GO:0003824,GO:0004424,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016829,GO:0016835,GO:0016836,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607	3.1.3.15,4.2.1.19	ko:K01089,ko:K01693	ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230	M00026	R03013,R03457	RC00017,RC00932	ko00000,ko00001,ko00002,ko01000	-	-	-	Hydrolase_like,IGPD,PNK3P
BYD3_k127_2351790_22	742767.HMPREF9456_01060	6.656e-123	405.0	COG0079@1|root,COG0079@2|Bacteria,4NEDI@976|Bacteroidetes,2FMFQ@200643|Bacteroidia,22WB3@171551|Porphyromonadaceae	976|Bacteroidetes	E	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily	hisC	-	2.6.1.9	ko:K00817	ko00340,ko00350,ko00360,ko00400,ko00401,ko00960,ko01100,ko01110,ko01130,ko01230,map00340,map00350,map00360,map00400,map00401,map00960,map01100,map01110,map01130,map01230	M00026	R00694,R00734,R03243	RC00006,RC00888	ko00000,ko00001,ko00002,ko01000,ko01007	-	-	-	Aminotran_1_2
BYD3_k127_2351790_13	1121904.ARBP01000001_gene5747	1.249e-163	527.0	COG0141@1|root,COG0141@2|Bacteria,4NFPZ@976|Bacteroidetes,47JSY@768503|Cytophagia	976|Bacteroidetes	E	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine	hisD	GO:0000105,GO:0003674,GO:0003824,GO:0004399,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0052803,GO:0055114,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607	1.1.1.23	ko:K00013	ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230	M00026	R01158,R01163,R03012	RC00099,RC00242,RC00463	ko00000,ko00001,ko00002,ko01000	-	-	-	Histidinol_dh
BYD3_k127_2351790_21	1237149.C900_03327	5.716e-124	402.0	COG0040@1|root,COG0040@2|Bacteria,4NDW8@976|Bacteroidetes,47M8W@768503|Cytophagia	976|Bacteroidetes	E	ATP phosphoribosyltransferase	hisG	GO:0000105,GO:0003674,GO:0003824,GO:0003879,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016740,GO:0016757,GO:0016763,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607	2.4.2.17	ko:K00765	ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230	M00026	R01071	RC02819,RC03200	ko00000,ko00001,ko00002,ko01000	-	-	-	HisG,HisG_C
BYD3_k127_2351790_45	1124780.ANNU01000074_gene744	1.336e-67	242.0	COG0457@1|root,COG0457@2|Bacteria,4NJ1F@976|Bacteroidetes,47NCH@768503|Cytophagia	976|Bacteroidetes	S	PFAM Tetratricopeptide repeat	-	-	-	-	-	-	-	-	-	-	-	-	TPR_1,TPR_11,TPR_16,TPR_2,TPR_8
BYD3_k127_2351790_55	643867.Ftrac_2984	6.893e-49	182.0	COG0494@1|root,COG0494@2|Bacteria,4NM6C@976|Bacteroidetes,47MQZ@768503|Cytophagia	976|Bacteroidetes	L	pfam nudix	-	-	-	-	-	-	-	-	-	-	-	-	NUDIX
BYD3_k127_2351790_38	1237149.C900_02073	5.277e-80	270.0	COG1528@1|root,COG1528@2|Bacteria,4NGS7@976|Bacteroidetes,47Q0N@768503|Cytophagia	976|Bacteroidetes	P	Iron-storage protein	ftnA	-	1.16.3.2	ko:K02217	-	-	-	-	ko00000,ko01000	-	-	-	Ferritin
BYD3_k127_2351790_52	1121904.ARBP01000011_gene1491	9.719e-55	199.0	COG2197@1|root,COG2197@2|Bacteria,4NN2R@976|Bacteroidetes,47W05@768503|Cytophagia	976|Bacteroidetes	T	helix_turn_helix, Lux Regulon	narL	-	-	-	-	-	-	-	-	-	-	-	GerE,Response_reg
BYD3_k127_2351790_40	1237149.C900_05252	1.382e-75	258.0	COG2755@1|root,COG2755@2|Bacteria,4NE58@976|Bacteroidetes,47P77@768503|Cytophagia	976|Bacteroidetes	E	GDSL-like Lipase/Acylhydrolase family	tesA	-	3.1.1.5	ko:K10804	ko01040,map01040	-	-	-	ko00000,ko00001,ko01000,ko01004	-	-	-	Lipase_GDSL_2
BYD3_k127_2351790_31	1237149.C900_05253	2.018e-99	329.0	COG4181@1|root,COG4181@2|Bacteria,4NEVZ@976|Bacteroidetes,47JSN@768503|Cytophagia	976|Bacteroidetes	Q	ABC transporter	-	-	-	ko:K02003	-	M00258	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	ABC_tran
BYD3_k127_2351790_3	1237149.C900_03353	3.533e-294	909.0	COG0488@1|root,COG0488@2|Bacteria,4NEHU@976|Bacteroidetes,47J97@768503|Cytophagia	976|Bacteroidetes	S	ABC transporter	-	-	-	-	-	-	-	-	-	-	-	-	ABC_tran,ABC_tran_Xtn
BYD3_k127_2351790_30	1121904.ARBP01000019_gene2808	8.396e-101	338.0	COG2188@1|root,COG2188@2|Bacteria,4PMHY@976|Bacteroidetes,47YD4@768503|Cytophagia	976|Bacteroidetes	K	helix_turn_helix gluconate operon transcriptional repressor	-	-	-	-	-	-	-	-	-	-	-	-	GntR,Peripla_BP_3
BYD3_k127_2351790_26	1121904.ARBP01000005_gene4748	1.356e-115	387.0	COG1070@1|root,COG1070@2|Bacteria,4NE3S@976|Bacteroidetes,47MWB@768503|Cytophagia	976|Bacteroidetes	G	Sugar (Pentulose and hexulose)	-	-	-	-	-	-	-	-	-	-	-	-	FGGY_C,FGGY_N
BYD3_k127_2351790_8	1121904.ARBP01000005_gene4749	1.664e-217	683.0	COG1457@1|root,COG1457@2|Bacteria,4NHHC@976|Bacteroidetes,47KQF@768503|Cytophagia	976|Bacteroidetes	F	Belongs to the purine-cytosine permease (2.A.39) family	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_2351790_63	1121904.ARBP01000005_gene4750	5.706e-11	64.0	2EN3D@1|root,33FRH@2|Bacteria,4NZ77@976|Bacteroidetes,47T85@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_2351790_20	1123278.KB893588_gene470	8.171e-133	443.0	2CB42@1|root,2Z7Y3@2|Bacteria,4NEUY@976|Bacteroidetes,47N6R@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_2351790_9	1185876.BN8_06003	1.686e-172	546.0	COG1879@1|root,COG1879@2|Bacteria,4NKXR@976|Bacteroidetes,47U11@768503|Cytophagia	976|Bacteroidetes	G	Periplasmic binding protein domain	-	-	-	ko:K10439	ko02010,ko02030,map02010,map02030	M00212	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.2.1,3.A.1.2.13,3.A.1.2.19	-	-	Peripla_BP_4
BYD3_k127_2351790_19	1185876.BN8_06002	7.706e-134	432.0	COG1172@1|root,COG1172@2|Bacteria,4NHD9@976|Bacteroidetes,47KFH@768503|Cytophagia	976|Bacteroidetes	G	Branched-chain amino acid transport system / permease component	-	-	-	ko:K10439,ko:K10440	ko02010,ko02030,map02010,map02030	M00212	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.2.1,3.A.1.2.13,3.A.1.2.19	-	-	BPD_transp_2
BYD3_k127_2351790_12	1185876.BN8_05996	1.779e-165	533.0	COG1129@1|root,COG1129@2|Bacteria,4PKJP@976|Bacteroidetes,47JPJ@768503|Cytophagia	976|Bacteroidetes	G	ABC transporter	-	-	3.6.3.17	ko:K10441	ko02010,map02010	M00212	-	-	ko00000,ko00001,ko00002,ko01000,ko02000	3.A.1.2.1,3.A.1.2.13,3.A.1.2.19	-	-	ABC_tran
BYD3_k127_2351790_18	761193.Runsl_3639	2.665e-140	453.0	COG0673@1|root,COG0673@2|Bacteria,4NJEP@976|Bacteroidetes,47NE5@768503|Cytophagia	976|Bacteroidetes	S	Oxidoreductase family, NAD-binding Rossmann fold	-	-	-	-	-	-	-	-	-	-	-	-	GFO_IDH_MocA,GFO_IDH_MocA_C
BYD3_k127_2351790_7	761193.Runsl_3638	1.105e-220	691.0	COG2730@1|root,COG2730@2|Bacteria,4NF3J@976|Bacteroidetes,47M4E@768503|Cytophagia	976|Bacteroidetes	G	Putative collagen-binding domain of a collagenase	-	-	-	-	-	-	-	-	-	-	-	-	Collagen_bind_2,DUF4038
BYD3_k127_2351790_14	761193.Runsl_3636	1.654e-150	479.0	COG0287@1|root,COG0287@2|Bacteria,4NGI9@976|Bacteroidetes,47JFK@768503|Cytophagia	976|Bacteroidetes	E	Phosphogluconate dehydrogenase (decarboxylating) C-term	-	-	-	-	-	-	-	-	-	-	-	-	NAD_binding_2,PGDH_C
BYD3_k127_2351790_44	1288963.ADIS_3118	6.864e-68	239.0	COG1082@1|root,COG1082@2|Bacteria,4NPBS@976|Bacteroidetes,47Q6G@768503|Cytophagia	976|Bacteroidetes	G	Xylose isomerase-like TIM barrel	-	-	-	-	-	-	-	-	-	-	-	-	AP_endonuc_2
BYD3_k127_2351790_48	471854.Dfer_5736	2.983e-64	231.0	COG0662@1|root,COG2207@1|root,COG0662@2|Bacteria,COG2207@2|Bacteria,4NE6T@976|Bacteroidetes,47KCW@768503|Cytophagia	976|Bacteroidetes	K	Transcriptional regulator, AraC family	-	-	-	-	-	-	-	-	-	-	-	-	AraC_binding,Cupin_2,HTH_18
BYD3_k127_2351790_51	485918.Cpin_6026	1.987e-56	200.0	COG3408@1|root,COG3408@2|Bacteria,4NHHR@976|Bacteroidetes,1IV86@117747|Sphingobacteriia	976|Bacteroidetes	G	Alpha-L-rhamnosidase	-	-	-	-	-	-	-	-	-	-	-	-	Bac_rhamnosid,Bac_rhamnosid6H,Bac_rhamnosid_C,Bac_rhamnosid_N
BYD3_k127_2351790_68	1123276.KB893247_gene199	6.089e-06	53.0	COG3408@1|root,COG3408@2|Bacteria,4NHHR@976|Bacteroidetes,47MK4@768503|Cytophagia	976|Bacteroidetes	G	Bacterial alpha-L-rhamnosidase C-terminal domain	-	-	-	-	-	-	-	-	-	-	-	-	Bac_rhamnosid,Bac_rhamnosid6H,Bac_rhamnosid_C,Bac_rhamnosid_N
BYD3_k127_2351790_66	929703.KE386491_gene2060	2.164e-07	56.0	COG3408@1|root,COG3408@2|Bacteria,4NHHR@976|Bacteroidetes,47MK4@768503|Cytophagia	976|Bacteroidetes	G	Bacterial alpha-L-rhamnosidase C-terminal domain	-	-	-	-	-	-	-	-	-	-	-	-	Bac_rhamnosid,Bac_rhamnosid6H,Bac_rhamnosid_C,Bac_rhamnosid_N
BYD3_k127_2351790_50	573413.Spirs_0127	1.739e-60	214.0	COG1247@1|root,COG1247@2|Bacteria,2J5RD@203691|Spirochaetes	203691|Spirochaetes	M	Acetyltransferase (GNAT) family	-	-	2.3.1.183	ko:K03823	ko00440,ko01130,map00440,map01130	-	R08871,R08938	RC00004,RC00064	ko00000,ko00001,ko01000	-	-	-	Acetyltransf_3,Acetyltransf_4
BYD3_k127_2351790_67	1249997.JHZW01000002_gene1996	1.371e-06	58.0	2AAHE@1|root,30ZUG@2|Bacteria,4PE5G@976|Bacteroidetes,1IEM0@117743|Flavobacteriia,2PI63@252356|Maribacter	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_2351790_6	1123248.KB893326_gene1470	3.238e-224	701.0	COG2271@1|root,COG2271@2|Bacteria,4NGXW@976|Bacteroidetes,1IV4E@117747|Sphingobacteriia	976|Bacteroidetes	G	Uncharacterised MFS-type transporter YbfB	-	-	-	-	-	-	-	-	-	-	-	-	MFS_1
BYD3_k127_2351790_64	1205753.A989_14387	1.6e-10	64.0	2EK70@1|root,33DXD@2|Bacteria,1NA99@1224|Proteobacteria,1SJFZ@1236|Gammaproteobacteria,1X82Y@135614|Xanthomonadales	135614|Xanthomonadales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_2351790_65	1249997.JHZW01000002_gene1996	1.086e-08	64.0	2AAHE@1|root,30ZUG@2|Bacteria,4PE5G@976|Bacteroidetes,1IEM0@117743|Flavobacteriia,2PI63@252356|Maribacter	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_2351790_15	1123276.KB893246_gene732	4.002e-147	475.0	COG1073@1|root,COG1073@2|Bacteria,4NI6C@976|Bacteroidetes,47N3Z@768503|Cytophagia	976|Bacteroidetes	S	Acetyl xylan esterase	-	-	-	-	-	-	-	-	-	-	-	-	AXE1
BYD3_k127_2351790_53	313606.M23134_02059	1.012e-50	194.0	COG1073@1|root,COG1073@2|Bacteria,4NJGA@976|Bacteroidetes,47W72@768503|Cytophagia	976|Bacteroidetes	S	BAAT / Acyl-CoA thioester hydrolase C terminal	-	-	-	-	-	-	-	-	-	-	-	-	BAAT_C
BYD3_k127_2351790_33	1286632.P278_31470	1.131e-93	312.0	COG0454@1|root,COG0456@2|Bacteria,4NH5K@976|Bacteroidetes,1I25M@117743|Flavobacteriia	976|Bacteroidetes	K	FR47-like protein	-	-	-	-	-	-	-	-	-	-	-	-	FR47
BYD3_k127_2351790_35	1229487.AMYW01000021_gene1729	3.079e-89	299.0	COG4775@1|root,COG4775@2|Bacteria,4NRT9@976|Bacteroidetes,1I4PV@117743|Flavobacteriia,2NYF2@237|Flavobacterium	976|Bacteroidetes	M	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_2351790_28	1229487.AMYW01000021_gene1730	1.391e-105	352.0	COG2267@1|root,COG2267@2|Bacteria,4NIGT@976|Bacteroidetes,1I1MM@117743|Flavobacteriia,2P046@237|Flavobacterium	976|Bacteroidetes	I	Serine aminopeptidase, S33	-	-	3.4.11.5	ko:K01259	ko00330,map00330	-	R00135	-	ko00000,ko00001,ko01000,ko01002	-	-	-	Hydrolase_4
BYD3_k127_2351790_27	1229487.AMYW01000021_gene1731	5.001e-115	382.0	COG2207@1|root,COG2207@2|Bacteria,4NIJV@976|Bacteroidetes,1HZ3N@117743|Flavobacteriia,2NXGC@237|Flavobacterium	976|Bacteroidetes	K	helix_turn_helix, arabinose operon control protein	-	-	-	-	-	-	-	-	-	-	-	-	HTH_18
BYD3_k127_2351790_47	485918.Cpin_6691	1.211e-66	231.0	COG0262@1|root,COG0262@2|Bacteria,4NJIQ@976|Bacteroidetes,1IWPD@117747|Sphingobacteriia	976|Bacteroidetes	H	bifunctional deaminase-reductase domain protein	-	-	1.5.1.3	ko:K00287	ko00670,ko00790,ko01100,ko01523,map00670,map00790,map01100,map01523	M00126,M00840	R00936,R00937,R00939,R00940,R02235,R02236,R11765	RC00109,RC00110,RC00158	ko00000,ko00001,ko00002,ko01000	-	-	-	RibD_C
BYD3_k127_2351790_16	926549.KI421517_gene2859	2.104e-145	466.0	COG0327@1|root,COG0327@2|Bacteria,4NFJ3@976|Bacteroidetes,47NXF@768503|Cytophagia	976|Bacteroidetes	S	NIF3 (NGG1p interacting factor 3)	-	-	-	-	-	-	-	-	-	-	-	-	NIF3
BYD3_k127_2351790_25	1296416.JACB01000044_gene4920	3.551e-116	385.0	COG1680@1|root,COG1680@2|Bacteria,4NIG6@976|Bacteroidetes,1I137@117743|Flavobacteriia	976|Bacteroidetes	V	Beta-lactamase	-	-	-	-	-	-	-	-	-	-	-	-	Beta-lactamase
BYD3_k127_2351790_58	1173020.Cha6605_6217	2.299e-36	143.0	COG0703@1|root,COG0703@2|Bacteria	2|Bacteria	F	shikimate kinase activity	-	-	-	-	-	-	-	-	-	-	-	-	AAA_18,SKI
BYD3_k127_2351790_59	643867.Ftrac_3408	2.192e-34	139.0	COG3712@1|root,COG3712@2|Bacteria	2|Bacteria	PT	iron ion homeostasis	-	-	-	-	-	-	-	-	-	-	-	-	DUF4974,FecR
BYD3_k127_2351790_23	102125.Xen7305DRAFT_00047130	3.648e-119	391.0	COG0604@1|root,COG0604@2|Bacteria,1G0N4@1117|Cyanobacteria,3VJSQ@52604|Pleurocapsales	1117|Cyanobacteria	C	PFAM Alcohol dehydrogenase GroES-like domain	-	-	-	-	-	-	-	-	-	-	-	-	ADH_N,ADH_zinc_N_2
BYD3_k127_2351790_32	1406840.Q763_16235	5.956e-97	323.0	COG3361@1|root,COG3361@2|Bacteria,4NITY@976|Bacteroidetes,1I0CJ@117743|Flavobacteriia,2NUTU@237|Flavobacterium	976|Bacteroidetes	S	Uncharacterized conserved protein (COG2071)	-	-	-	ko:K09166	-	-	-	-	ko00000	-	-	-	DUF2071
BYD3_k127_2351790_56	886293.Sinac_4315	6.61e-43	164.0	COG0500@1|root,COG2226@2|Bacteria,2J382@203682|Planctomycetes	203682|Planctomycetes	Q	Methyltransferase domain	-	-	-	-	-	-	-	-	-	-	-	-	Methyltransf_25
BYD3_k127_2351790_46	278963.ATWD01000002_gene976	3.289e-67	241.0	COG1064@1|root,COG1064@2|Bacteria,3Y2QS@57723|Acidobacteria	57723|Acidobacteria	S	Zinc-binding dehydrogenase	-	-	-	ko:K12957	-	-	-	-	ko00000,ko01000	-	-	-	ADH_N,ADH_zinc_N
BYD3_k127_2351790_42	1185876.BN8_02019	1.628e-71	245.0	COG1073@1|root,COG1073@2|Bacteria,4NS0T@976|Bacteroidetes,47QGY@768503|Cytophagia	976|Bacteroidetes	S	Serine hydrolase	-	-	-	ko:K07002	-	-	-	-	ko00000	-	-	-	Ser_hydrolase
BYD3_k127_2351790_11	1288963.ADIS_4714	5.25e-168	533.0	COG3693@1|root,COG3693@2|Bacteria,4NE5Z@976|Bacteroidetes,47Q9Y@768503|Cytophagia	976|Bacteroidetes	G	Glycosyl hydrolase family 10	xynT	-	3.2.1.8	ko:K01181	-	-	-	-	ko00000,ko01000	-	-	-	CBM_4_9,Glyco_hydro_10
BYD3_k127_236724_4	929562.Emtol_1032	2.117e-129	421.0	COG2055@1|root,COG2055@2|Bacteria,4NGVC@976|Bacteroidetes,47MHU@768503|Cytophagia	976|Bacteroidetes	C	Belongs to the LDH2 MDH2 oxidoreductase family	-	-	1.1.1.130	ko:K08092	ko00040,ko00053,map00040,map00053	-	R02637,R02639	RC00238	ko00000,ko00001,ko01000	-	-	-	Ldh_2
BYD3_k127_236724_8	518766.Rmar_1391	3.085e-99	330.0	COG0684@1|root,COG0684@2|Bacteria	2|Bacteria	H	ribonuclease inhibitor activity	-	-	-	-	-	-	-	-	-	-	-	-	RraA-like
BYD3_k127_236724_1	926549.KI421517_gene2791	7.403e-212	665.0	COG2271@1|root,COG2271@2|Bacteria,4NE7R@976|Bacteroidetes,47JBJ@768503|Cytophagia	976|Bacteroidetes	G	PFAM Major Facilitator Superfamily	-	-	-	ko:K08191	-	-	-	-	ko00000,ko02000	2.A.1.14.2	-	-	MFS_1
BYD3_k127_236724_12	926556.Echvi_3630	1.048e-67	237.0	COG0800@1|root,COG0800@2|Bacteria,4NEFY@976|Bacteroidetes,47PM4@768503|Cytophagia	976|Bacteroidetes	G	PFAM KDPG and KHG aldolase	eda	-	4.1.2.14,4.1.3.42	ko:K01625	ko00030,ko00630,ko01100,ko01120,ko01200,map00030,map00630,map01100,map01120,map01200	M00008,M00061,M00308,M00631	R00470,R05605	RC00307,RC00308,RC00435	ko00000,ko00001,ko00002,ko01000	-	-	-	Aldolase
BYD3_k127_236724_5	1123057.P872_04170	5.568e-126	411.0	COG0524@1|root,COG0524@2|Bacteria,4NFH8@976|Bacteroidetes,47KKJ@768503|Cytophagia	976|Bacteroidetes	G	PFAM PfkB	-	-	2.7.1.45	ko:K00874	ko00030,ko01100,ko01120,ko01200,map00030,map01100,map01120,map01200	M00061,M00308,M00631	R01541	RC00002,RC00017	ko00000,ko00001,ko00002,ko01000	-	-	-	PfkB
BYD3_k127_236724_9	411479.BACUNI_01039	1.872e-94	316.0	COG1028@1|root,COG1028@2|Bacteria,4NG8R@976|Bacteroidetes,2FMB9@200643|Bacteroidia,4AM6Q@815|Bacteroidaceae	976|Bacteroidetes	IQ	Oxidoreductase, short chain dehydrogenase reductase family protein	uxuB	-	-	-	-	-	-	-	-	-	-	-	adh_short,adh_short_C2
BYD3_k127_236724_6	926549.KI421517_gene716	1.349e-123	405.0	COG0673@1|root,COG0673@2|Bacteria,4NEQB@976|Bacteroidetes,47KWZ@768503|Cytophagia	976|Bacteroidetes	S	Oxidoreductase family, NAD-binding Rossmann fold	yvaA	-	1.1.1.371	ko:K16044	ko00562,ko01120,map00562,map01120	-	R09954	RC00182	ko00000,ko00001,ko01000	-	-	-	GFO_IDH_MocA,GFO_IDH_MocA_C
BYD3_k127_236724_16	926556.Echvi_3630	4.992e-45	173.0	COG0800@1|root,COG0800@2|Bacteria,4NEFY@976|Bacteroidetes,47PM4@768503|Cytophagia	976|Bacteroidetes	G	PFAM KDPG and KHG aldolase	eda	-	4.1.2.14,4.1.3.42	ko:K01625	ko00030,ko00630,ko01100,ko01120,ko01200,map00030,map00630,map01100,map01120,map01200	M00008,M00061,M00308,M00631	R00470,R05605	RC00307,RC00308,RC00435	ko00000,ko00001,ko00002,ko01000	-	-	-	Aldolase
BYD3_k127_236724_0	1124780.ANNU01000008_gene2665	5.588e-269	837.0	COG2721@1|root,COG2721@2|Bacteria,4NFVQ@976|Bacteroidetes,47K7S@768503|Cytophagia	976|Bacteroidetes	G	PFAM D-galactarate dehydratase Altronate hydrolase	uxaA	-	4.2.1.7	ko:K01685	ko00040,ko01100,map00040,map01100	M00631	R01540	RC00543	ko00000,ko00001,ko00002,ko01000	-	-	-	GD_AH_C,SAF
BYD3_k127_236724_17	1121904.ARBP01000009_gene4305	5.518e-39	147.0	COG1917@1|root,COG1917@2|Bacteria	2|Bacteria	L	Cupin 2, conserved barrel domain protein	kdgF	-	-	-	-	-	-	-	-	-	-	-	Cupin_2
BYD3_k127_236724_7	1124780.ANNU01000008_gene2686	1.694e-119	390.0	COG3717@1|root,COG3717@2|Bacteria,4NDUV@976|Bacteroidetes,47K5H@768503|Cytophagia	976|Bacteroidetes	G	Catalyzes the isomerization of 5-dehydro-4-deoxy-D- glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate	kduI	-	5.3.1.17	ko:K01815	ko00040,map00040	-	R04383	RC00541	ko00000,ko00001,ko01000	-	-	-	KduI
BYD3_k127_236724_3	1124780.ANNU01000008_gene2688	3.779e-148	476.0	COG1609@1|root,COG1609@2|Bacteria,4NDW6@976|Bacteroidetes,47MCC@768503|Cytophagia	976|Bacteroidetes	K	lacI family	-	-	-	ko:K02529	-	-	-	-	ko00000,ko03000	-	-	-	LacI,Peripla_BP_1,Peripla_BP_3
BYD3_k127_236724_2	1124780.ANNU01000008_gene2689	1.211e-192	611.0	COG0246@1|root,COG0246@2|Bacteria,4NEMT@976|Bacteroidetes,47K47@768503|Cytophagia	976|Bacteroidetes	G	PFAM Mannitol dehydrogenase	uxaB	GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006063,GO:0006082,GO:0008150,GO:0008152,GO:0009026,GO:0009056,GO:0009987,GO:0016052,GO:0016054,GO:0016491,GO:0016614,GO:0016616,GO:0019586,GO:0019698,GO:0019752,GO:0032787,GO:0036094,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044281,GO:0044282,GO:0044424,GO:0044444,GO:0044464,GO:0046365,GO:0046395,GO:0046396,GO:0046397,GO:0048037,GO:0050662,GO:0051287,GO:0055114,GO:0071704,GO:0072329,GO:0097159,GO:1901265,GO:1901363,GO:1901575	1.1.1.17,1.1.1.58	ko:K00009,ko:K00041	ko00040,ko00051,ko01100,map00040,map00051,map01100	M00631	R02555,R02703	RC00085	ko00000,ko00001,ko00002,ko01000	-	-	-	Mannitol_dh,Mannitol_dh_C
BYD3_k127_236724_15	1286632.P278_22790	1.292e-45	172.0	2EW2I@1|root,33PFS@2|Bacteria,4P292@976|Bacteroidetes,1I7PC@117743|Flavobacteriia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_236724_11	1123277.KB893178_gene2675	7.292e-78	262.0	293T3@1|root,2ZR8H@2|Bacteria,4NMK3@976|Bacteroidetes,47PZ7@768503|Cytophagia	976|Bacteroidetes	S	Protein of unknown function (DUF2975)	-	-	-	-	-	-	-	-	-	-	-	-	DUF2975
BYD3_k127_236724_18	485918.Cpin_5711	3.475e-36	137.0	COG3655@1|root,COG3655@2|Bacteria,4NUP7@976|Bacteroidetes,1IT96@117747|Sphingobacteriia	976|Bacteroidetes	K	Cro/C1-type HTH DNA-binding domain	-	-	-	ko:K07727	-	-	-	-	ko00000,ko03000	-	-	-	HTH_26
BYD3_k127_236724_13	296591.Bpro_1275	2.649e-56	197.0	COG4274@1|root,COG4274@2|Bacteria,1RKGA@1224|Proteobacteria	1224|Proteobacteria	S	GYD domain	-	-	-	-	-	-	-	-	-	-	-	-	GYD
BYD3_k127_236724_14	296591.Bpro_1275	6.917e-52	187.0	COG4274@1|root,COG4274@2|Bacteria,1RKGA@1224|Proteobacteria	1224|Proteobacteria	S	GYD domain	-	-	-	-	-	-	-	-	-	-	-	-	GYD
BYD3_k127_236724_19	997884.HMPREF1068_00730	2.579e-22	106.0	2E9XM@1|root,3343C@2|Bacteria,4NVCJ@976|Bacteroidetes,2FQA6@200643|Bacteroidia,4AMCF@815|Bacteroidaceae	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	DUF4384
BYD3_k127_236724_10	1236514.BAKL01000026_gene2457	9.199e-87	308.0	COG0457@1|root,COG4249@1|root,COG0457@2|Bacteria,COG4249@2|Bacteria,4NNVR@976|Bacteroidetes,2FQ82@200643|Bacteroidia,4APNV@815|Bacteroidaceae	976|Bacteroidetes	S	Caspase domain	-	-	-	-	-	-	-	-	-	-	-	-	Peptidase_C14,TPR_16
BYD3_k127_2413_23	1250232.JQNJ01000001_gene727	6.849e-37	146.0	2C852@1|root,32YB2@2|Bacteria,4NM63@976|Bacteroidetes,1I1C4@117743|Flavobacteriia	976|Bacteroidetes	S	Domain of unknown function (DUF4136)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4136
BYD3_k127_2413_19	1121904.ARBP01000018_gene2689	2.928e-48	178.0	2E5SP@1|root,330H2@2|Bacteria,4P4B3@976|Bacteroidetes	976|Bacteroidetes	S	Glycine-zipper domain	-	-	-	-	-	-	-	-	-	-	-	-	Gly-zipper_OmpA
BYD3_k127_2413_6	1121904.ARBP01000018_gene2707	3.523e-178	568.0	COG0729@1|root,COG0729@2|Bacteria,4PMQ2@976|Bacteroidetes,47YNU@768503|Cytophagia	976|Bacteroidetes	M	Surface antigen	-	-	-	-	-	-	-	-	-	-	-	-	Bac_surface_Ag
BYD3_k127_2413_9	926562.Oweho_1034	1.155e-133	435.0	COG4775@1|root,COG4775@2|Bacteria	2|Bacteria	M	membrane organization	-	-	-	-	-	-	-	-	-	-	-	-	Bac_surface_Ag
BYD3_k127_2413_32	1123278.KB893572_gene2272	1.775e-06	51.0	COG1435@1|root,COG1435@2|Bacteria,4PMQ9@976|Bacteroidetes,47JIY@768503|Cytophagia	976|Bacteroidetes	F	RagB SusD domain protein	-	-	-	ko:K21572	-	-	-	-	ko00000,ko02000	8.A.46.1,8.A.46.3	-	-	SusD-like_3,SusD_RagB
BYD3_k127_2413_30	1121481.AUAS01000001_gene4321	2.913e-10	61.0	COG0446@1|root,COG0446@2|Bacteria,4NE3A@976|Bacteroidetes,47Y6J@768503|Cytophagia	976|Bacteroidetes	S	SusD family	-	-	-	ko:K21572	-	-	-	-	ko00000,ko02000	8.A.46.1,8.A.46.3	-	-	SusD-like_3,SusD_RagB
BYD3_k127_2413_7	700598.Niako_5522	2.745e-164	540.0	COG0501@1|root,COG0501@2|Bacteria,4NFV7@976|Bacteroidetes,1IQJ8@117747|Sphingobacteriia	976|Bacteroidetes	O	Zn-dependent protease with chaperone	-	-	-	-	-	-	-	-	-	-	-	-	Peptidase_M48
BYD3_k127_2413_0	643867.Ftrac_1996	0.0	1085.0	COG0341@1|root,COG0342@1|root,COG0341@2|Bacteria,COG0342@2|Bacteria,4NE1X@976|Bacteroidetes,47JV4@768503|Cytophagia	976|Bacteroidetes	U	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA	secD	-	-	ko:K03072,ko:K12257	ko02024,ko03060,ko03070,map02024,map03060,map03070	M00335	-	-	ko00000,ko00001,ko00002,ko02044	2.A.6.4,3.A.5.2,3.A.5.7	-	-	SecD_SecF,Sec_GG
BYD3_k127_2413_11	760192.Halhy_3829	1.533e-124	402.0	COG0605@1|root,COG0605@2|Bacteria,4NIWF@976|Bacteroidetes,1IX0J@117747|Sphingobacteriia	976|Bacteroidetes	C	Iron/manganese superoxide dismutases, alpha-hairpin domain	-	-	1.15.1.1	ko:K04564	ko04013,ko04068,ko04146,ko04211,ko04212,ko04213,ko05016,map04013,map04068,map04146,map04211,map04212,map04213,map05016	-	-	-	ko00000,ko00001,ko01000	-	-	-	Sod_Fe_C,Sod_Fe_N
BYD3_k127_2413_24	688270.Celal_0214	2.569e-21	101.0	COG0394@1|root,COG0394@2|Bacteria,4P803@976|Bacteroidetes	976|Bacteroidetes	T	PFAM low molecular weight phosphotyrosine protein phosphatase	-	-	1.20.4.1	ko:K03741	-	-	-	-	ko00000,ko01000	-	-	-	LMWPc
BYD3_k127_2413_21	224911.27351346	5.011e-39	151.0	2AI2G@1|root,318G7@2|Bacteria,1PA80@1224|Proteobacteria,2UY7C@28211|Alphaproteobacteria,3K5IE@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_2413_16	313606.M23134_01094	1.122e-70	245.0	COG0745@1|root,COG0745@2|Bacteria,4NH5Q@976|Bacteroidetes,47UTX@768503|Cytophagia	976|Bacteroidetes	K	Transcriptional regulatory protein, C terminal	-	-	-	-	-	-	-	-	-	-	-	-	Response_reg,Trans_reg_C
BYD3_k127_2413_20	313606.M23134_01093	2.999e-43	173.0	COG0642@1|root,COG2205@2|Bacteria,4NEFW@976|Bacteroidetes,47Y16@768503|Cytophagia	976|Bacteroidetes	T	His Kinase A (phosphoacceptor) domain	-	-	2.7.13.3	ko:K07636	ko02020,map02020	M00434	-	-	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	-	-	-	HATPase_c,HisKA
BYD3_k127_2413_27	1237149.C900_03902	8.648e-18	84.0	2EK5G@1|root,33DVX@2|Bacteria,4PA8R@976|Bacteroidetes,47SYN@768503|Cytophagia	976|Bacteroidetes	S	Domain of unknown function (DUF4405)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4405
BYD3_k127_2413_15	1237149.C900_03902	2.679e-91	308.0	2EK5G@1|root,33DVX@2|Bacteria,4PA8R@976|Bacteroidetes,47SYN@768503|Cytophagia	976|Bacteroidetes	S	Domain of unknown function (DUF4405)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4405
BYD3_k127_2413_17	760192.Halhy_1783	1.916e-58	209.0	2DI69@1|root,30258@2|Bacteria,4PJ1K@976|Bacteroidetes,1IZ7W@117747|Sphingobacteriia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_2413_2	1121286.AUMT01000003_gene2029	2.045e-291	911.0	COG2217@1|root,COG2217@2|Bacteria,4NERS@976|Bacteroidetes,1HYU1@117743|Flavobacteriia,3ZP15@59732|Chryseobacterium	976|Bacteroidetes	P	E1-E2 ATPase	-	-	3.6.3.4,3.6.3.54	ko:K01533,ko:K17686	ko01524,ko04016,map01524,map04016	-	R00086	RC00002	ko00000,ko00001,ko01000	3.A.3.5	-	-	E1-E2_ATPase,Hydrolase
BYD3_k127_2413_8	761193.Runsl_5948	2.677e-150	490.0	COG2132@1|root,COG2132@2|Bacteria,4NE3N@976|Bacteroidetes,47KSB@768503|Cytophagia	976|Bacteroidetes	Q	PFAM multicopper oxidase type 3	-	-	-	-	-	-	-	-	-	-	-	-	Cu-oxidase,Cu-oxidase_2,Cu-oxidase_3
BYD3_k127_2413_13	1089547.KB913013_gene4446	1.546e-113	379.0	COG0845@1|root,COG0845@2|Bacteria,4NG8S@976|Bacteroidetes,47K97@768503|Cytophagia	976|Bacteroidetes	M	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family	-	-	-	ko:K07798,ko:K15727	ko02020,map02020	-	-	-	ko00000,ko00001,ko02000	2.A.6.1.4,8.A.1,8.A.1.2.1	-	-	DUF3347,HlyD_D23
BYD3_k127_2413_14	926549.KI421517_gene1244	2.919e-95	327.0	COG0845@1|root,COG0845@2|Bacteria,4NG8S@976|Bacteroidetes,47NGP@768503|Cytophagia	976|Bacteroidetes	M	Barrel-sandwich domain of CusB or HlyD membrane-fusion	-	-	-	ko:K07798	ko02020,map02020	-	-	-	ko00000,ko00001,ko02000	2.A.6.1.4,8.A.1	-	-	HlyD_3,HlyD_D23
BYD3_k127_2413_12	1123278.KB893556_gene3803	4.984e-114	381.0	COG1538@1|root,COG1538@2|Bacteria,4NFEC@976|Bacteroidetes,47KYU@768503|Cytophagia	976|Bacteroidetes	MU	Outer membrane efflux protein	-	-	-	-	-	-	-	-	-	-	-	-	OEP
BYD3_k127_2413_1	485917.Phep_3053	0.0	1013.0	COG3696@1|root,COG3696@2|Bacteria,4P36A@976|Bacteroidetes,1IP0C@117747|Sphingobacteriia	976|Bacteroidetes	P	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family	-	-	-	ko:K07787,ko:K15726	ko02020,map02020	-	-	-	ko00000,ko00001,ko02000	2.A.6.1.2,2.A.6.1.4	-	-	ACR_tran
BYD3_k127_2413_4	1089547.KB913013_gene4441	8.033e-225	703.0	COG3696@1|root,COG3696@2|Bacteria,4NFD2@976|Bacteroidetes,47M26@768503|Cytophagia	976|Bacteroidetes	P	AcrB/AcrD/AcrF family	-	-	-	-	-	-	-	-	-	-	-	-	ACR_tran
BYD3_k127_2413_28	866536.Belba_1288	3.624e-14	77.0	2BV1I@1|root,32QE9@2|Bacteria,4PC1S@976|Bacteroidetes,47WPH@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_2413_3	761193.Runsl_5945	1.697e-245	772.0	COG3696@1|root,COG3696@2|Bacteria,4P36A@976|Bacteroidetes,47N7N@768503|Cytophagia	976|Bacteroidetes	P	AcrB/AcrD/AcrF family	-	-	-	ko:K07787,ko:K15726	ko02020,map02020	-	-	-	ko00000,ko00001,ko02000	2.A.6.1.2,2.A.6.1.4	-	-	ACR_tran
BYD3_k127_2413_5	929556.Solca_2534	2.329e-181	576.0	COG3696@1|root,COG3696@2|Bacteria,4NFD2@976|Bacteroidetes,1IPX9@117747|Sphingobacteriia	976|Bacteroidetes	P	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family	-	-	-	-	-	-	-	-	-	-	-	-	ACR_tran
BYD3_k127_2413_31	866536.Belba_1280	5.678e-07	57.0	2C56D@1|root,328TV@2|Bacteria,4NQMW@976|Bacteroidetes,47QT2@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	DUF3659
BYD3_k127_2413_18	1237149.C900_02138	7.971e-58	207.0	COG0716@1|root,COG0716@2|Bacteria,4NVV8@976|Bacteroidetes	976|Bacteroidetes	C	FMN binding	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_2413_29	700598.Niako_4640	3.17e-11	65.0	2E2VH@1|root,32XX5@2|Bacteria,4NTVW@976|Bacteroidetes	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_2413_25	700598.Niako_4640	9.296e-21	95.0	2E2VH@1|root,32XX5@2|Bacteria,4NTVW@976|Bacteroidetes	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_2413_10	468059.AUHA01000002_gene1349	2.634e-126	420.0	COG0659@1|root,COG0659@2|Bacteria,4NE9G@976|Bacteroidetes,1INYY@117747|Sphingobacteriia	976|Bacteroidetes	P	COGs COG0659 Sulfate permease and related transporter (MFS superfamily)	-	-	4.2.1.1	ko:K01673,ko:K03321	ko00910,map00910	-	R00132,R10092	RC02807	ko00000,ko00001,ko01000,ko02000	2.A.53.3	-	-	Pro_CA,Sulfate_transp
BYD3_k127_2458552_3	1123277.KB893195_gene5572	3.047e-139	462.0	COG3409@1|root,COG3409@2|Bacteria	2|Bacteria	M	Peptidoglycan-binding domain 1 protein	-	-	3.4.17.14	ko:K07260	ko00550,ko01100,ko01502,ko02020,map00550,map01100,map01502,map02020	M00651	-	-	ko00000,ko00001,ko00002,ko01000,ko01002,ko01011,ko01504	-	-	-	Biotin_lipoyl_2,CHAP,HlyD_3,Muraidase,PG_binding_1,VanY
BYD3_k127_2458552_0	404380.Gbem_2557	1.982e-266	866.0	COG1361@1|root,COG3087@1|root,COG5412@1|root,COG1361@2|Bacteria,COG3087@2|Bacteria,COG5412@2|Bacteria,1NAH7@1224|Proteobacteria,4316G@68525|delta/epsilon subdivisions,2WWHJ@28221|Deltaproteobacteria	28221|Deltaproteobacteria	DM	Domain of unknown function (DUF4157)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4157
BYD3_k127_2458552_2	1237149.C900_03059	5.58e-216	696.0	COG0577@1|root,COG0577@2|Bacteria,4NDUK@976|Bacteroidetes,47JJN@768503|Cytophagia	976|Bacteroidetes	V	FtsX-like permease family	-	-	-	ko:K02004	-	M00258	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	FtsX,MacB_PCD
BYD3_k127_2458552_7	1336245.JAGO01000011_gene283	7.682e-29	124.0	2E047@1|root,32VSV@2|Bacteria,1RK11@1224|Proteobacteria,1S49N@1236|Gammaproteobacteria,1XQZG@135619|Oceanospirillales	135619|Oceanospirillales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_2458552_5	1121897.AUGO01000009_gene3046	2.307e-57	205.0	COG3871@1|root,COG3871@2|Bacteria,4NNGC@976|Bacteroidetes,1I1XY@117743|Flavobacteriia,2NWBT@237|Flavobacterium	976|Bacteroidetes	S	general stress protein	-	-	-	-	-	-	-	-	-	-	-	-	Pyrid_ox_like
BYD3_k127_2458552_11	929703.KE386491_gene1724	9.054e-13	71.0	COG0577@1|root,COG0577@2|Bacteria,4NDUK@976|Bacteroidetes,47JJN@768503|Cytophagia	976|Bacteroidetes	V	FtsX-like permease family	-	-	-	ko:K02004	-	M00258	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	FtsX,MacB_PCD
BYD3_k127_2458552_1	504472.Slin_5726	6.405e-237	749.0	COG4948@1|root,COG4948@2|Bacteria,4PKP3@976|Bacteroidetes,47NVU@768503|Cytophagia	976|Bacteroidetes	M	Glycosyl-hydrolase 97 C-terminal, oligomerisation	-	-	3.2.1.20	ko:K01187	ko00052,ko00500,ko01100,map00052,map00500,map01100	-	R00028,R00801,R00802,R06087,R06088	RC00028,RC00049,RC00077	ko00000,ko00001,ko01000	-	GH31	-	GH97_C,GH97_N,Glyco_hydro_97
BYD3_k127_2458552_9	1121904.ARBP01000018_gene2597	7.462e-23	106.0	2E1MN@1|root,32WYS@2|Bacteria,4NYIS@976|Bacteroidetes	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	2_5_RNA_ligase2
BYD3_k127_2458552_4	99598.Cal7507_3812	3.786e-69	243.0	COG1209@1|root,COG1209@2|Bacteria,1G0RG@1117|Cyanobacteria,1HMZK@1161|Nostocales	1117|Cyanobacteria	M	dTDP-glucose pyrophosphorylase	-	-	2.7.7.24	ko:K00973	ko00521,ko00523,ko00525,ko01130,map00521,map00523,map00525,map01130	M00793	R02328	RC00002	ko00000,ko00001,ko00002,ko01000	-	-	-	NTP_transferase
BYD3_k127_2458552_8	653386.HMPREF0975_02836	1.726e-28	117.0	COG4430@1|root,COG4430@2|Bacteria,2II0D@201174|Actinobacteria	201174|Actinobacteria	S	protein conserved in bacteria	-	-	-	-	-	-	-	-	-	-	-	-	OmdA
BYD3_k127_2529567_17	1237149.C900_01309	2.115e-10	70.0	2BE7I@1|root,327YH@2|Bacteria,4NRWF@976|Bacteroidetes	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_2529567_6	926556.Echvi_0390	5.775e-67	243.0	COG3843@1|root,COG3843@2|Bacteria,4NKF3@976|Bacteroidetes,47RF2@768503|Cytophagia	976|Bacteroidetes	U	PFAM Relaxase Mobilisation nuclease domain	-	-	-	-	-	-	-	-	-	-	-	-	DUF3945,Relaxase
BYD3_k127_2529567_18	1070319.CAGGBEG34_440004	9.773e-09	62.0	2C7I9@1|root,32XJ5@2|Bacteria,1N212@1224|Proteobacteria,2VUUE@28216|Betaproteobacteria,1KF7W@119060|Burkholderiaceae	28216|Betaproteobacteria	S	Bacterial mobilisation protein (MobC)	mobC	-	-	-	-	-	-	-	-	-	-	-	MobC
BYD3_k127_2529567_14	1189620.AJXL01000045_gene1040	3.634e-16	82.0	28HND@1|root,2Z7WP@2|Bacteria,4NMSD@976|Bacteroidetes,1I1C9@117743|Flavobacteriia,2NX5F@237|Flavobacterium	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_2529567_13	402612.FP1539	2.008e-22	99.0	2E3D7@1|root,32YCE@2|Bacteria,4NVGT@976|Bacteroidetes,1I3YB@117743|Flavobacteriia,2NX4H@237|Flavobacterium	976|Bacteroidetes	S	Transcriptional regulator	-	-	-	-	-	-	-	-	-	-	-	-	HTH_17
BYD3_k127_2529567_19	565034.BHWA1_00173	0.0001084	52.0	COG0457@1|root,COG0457@2|Bacteria	565034.BHWA1_00173|-	S	peptidyl-tyrosine sulfation	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_2529567_7	1408813.AYMG01000023_gene2204	5.157e-49	179.0	COG4899@1|root,COG4899@2|Bacteria,4NNKE@976|Bacteroidetes,1IXDZ@117747|Sphingobacteriia	976|Bacteroidetes	S	Uncharacterized protein conserved in bacteria (DUF2199)	-	-	-	-	-	-	-	-	-	-	-	-	DUF2199
BYD3_k127_2529567_10	504472.Slin_0945	8.466e-36	142.0	COG1695@1|root,COG1695@2|Bacteria,4NS5H@976|Bacteroidetes,47QMA@768503|Cytophagia	976|Bacteroidetes	K	Transcriptional regulator PadR-like family	-	-	-	-	-	-	-	-	-	-	-	-	PadR
BYD3_k127_2529567_0	504472.Slin_3637	3.367e-306	968.0	COG0577@1|root,COG0577@2|Bacteria,4P1B0@976|Bacteroidetes,47U89@768503|Cytophagia	976|Bacteroidetes	V	MacB-like periplasmic core domain	-	-	-	-	-	-	-	-	-	-	-	-	MacB_PCD
BYD3_k127_2529567_5	1346330.M472_07685	8.667e-69	250.0	COG1680@1|root,COG1680@2|Bacteria,4NRU6@976|Bacteroidetes,1J04A@117747|Sphingobacteriia	976|Bacteroidetes	V	Beta-lactamase	-	-	-	-	-	-	-	-	-	-	-	-	Beta-lactamase
BYD3_k127_2529567_3	1185876.BN8_06454	1.416e-88	304.0	COG5263@1|root,COG5263@2|Bacteria,4NJ6B@976|Bacteroidetes,47PRU@768503|Cytophagia	976|Bacteroidetes	KLT	WG containing repeat	-	-	-	-	-	-	-	-	-	-	-	-	WG_beta_rep
BYD3_k127_2529567_9	1237149.C900_02720	5.219e-42	160.0	COG2825@1|root,COG2825@2|Bacteria,4NQHJ@976|Bacteroidetes,47QWE@768503|Cytophagia	976|Bacteroidetes	M	PFAM Outer membrane protein (OmpH-like)	ompH	-	-	ko:K06142	-	-	-	-	ko00000	-	-	-	OmpH
BYD3_k127_2529567_8	929703.KE386491_gene2119	3.593e-46	187.0	COG1196@1|root,COG4219@1|root,COG1196@2|Bacteria,COG4219@2|Bacteria,4NKKC@976|Bacteroidetes,47JQV@768503|Cytophagia	976|Bacteroidetes	KT	PFAM Peptidase M56, BlaR1	-	-	-	-	-	-	-	-	-	-	-	-	Peptidase_M56
BYD3_k127_2529567_12	1121948.AUAC01000003_gene2379	6.685e-28	119.0	COG3682@1|root,COG3682@2|Bacteria,1RBWP@1224|Proteobacteria,2U5ER@28211|Alphaproteobacteria,4413X@69657|Hyphomonadaceae	28211|Alphaproteobacteria	K	Penicillinase repressor	-	-	-	-	-	-	-	-	-	-	-	-	Penicillinase_R
BYD3_k127_2529567_16	929713.NIASO_05855	2.665e-12	68.0	COG3177@1|root,COG3177@2|Bacteria,4NF0H@976|Bacteroidetes,1IRF1@117747|Sphingobacteriia	976|Bacteroidetes	S	Domain of unknown function (DUF4172)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4172,Fic
BYD3_k127_2529567_15	555500.I215_14224	1.93e-12	75.0	2E3D7@1|root,32YCE@2|Bacteria,4NVGT@976|Bacteroidetes,1I3YB@117743|Flavobacteriia	976|Bacteroidetes	S	Helix-turn-helix domain	-	-	-	-	-	-	-	-	-	-	-	-	HTH_17
BYD3_k127_2529567_11	1237149.C900_04428	8.366e-29	118.0	COG1695@1|root,COG1695@2|Bacteria,4P48E@976|Bacteroidetes,47V9J@768503|Cytophagia	976|Bacteroidetes	K	Transcriptional regulator PadR-like family	-	-	-	-	-	-	-	-	-	-	-	-	PadR
BYD3_k127_2529567_2	1121904.ARBP01000008_gene3392	6.964e-196	641.0	COG0577@1|root,COG0577@2|Bacteria,4NDUK@976|Bacteroidetes	976|Bacteroidetes	V	permease	-	-	-	-	-	-	-	-	-	-	-	-	FtsX,MacB_PCD
BYD3_k127_2529567_1	1121904.ARBP01000008_gene3392	2.709e-197	645.0	COG0577@1|root,COG0577@2|Bacteria,4NDUK@976|Bacteroidetes	976|Bacteroidetes	V	permease	-	-	-	-	-	-	-	-	-	-	-	-	FtsX,MacB_PCD
BYD3_k127_2588349_14	1237149.C900_01409	3.089e-95	319.0	COG0758@1|root,COG0758@2|Bacteria,4NF7T@976|Bacteroidetes,47M2T@768503|Cytophagia	976|Bacteroidetes	LU	TIGRFAM DNA protecting protein DprA	dprA	-	-	ko:K04096	-	-	-	-	ko00000	-	-	-	DNA_processg_A,HHH_5
BYD3_k127_2588349_15	1237149.C900_01380	8.904e-85	286.0	COG0457@1|root,COG0457@2|Bacteria,4NUXH@976|Bacteroidetes,47XIV@768503|Cytophagia	976|Bacteroidetes	S	Tetratricopeptide repeat	-	-	-	-	-	-	-	-	-	-	-	-	TPR_11,TPR_8
BYD3_k127_2588349_11	1237149.C900_01378	7.628e-106	350.0	COG0119@1|root,COG0119@2|Bacteria,4NDZH@976|Bacteroidetes,47KB5@768503|Cytophagia	976|Bacteroidetes	E	Isopropylmalate homocitrate citramalate synthase	mvaB	-	4.1.3.4	ko:K01640	ko00072,ko00280,ko00281,ko00650,ko01100,ko04146,map00072,map00280,map00281,map00650,map01100,map04146	M00036,M00088	R01360,R08090	RC00502,RC00503,RC01118,RC01946	ko00000,ko00001,ko00002,ko01000	-	-	-	HMGL-like
BYD3_k127_2588349_3	1237149.C900_01377	1.254e-180	582.0	COG5267@1|root,COG5267@2|Bacteria,4NHSB@976|Bacteroidetes,47NYP@768503|Cytophagia	976|Bacteroidetes	S	Protein of unknown function (DUF1800)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1800
BYD3_k127_2588349_1	1237149.C900_01376	8.992e-207	658.0	COG4102@1|root,COG4102@2|Bacteria,4NFFC@976|Bacteroidetes,47MU2@768503|Cytophagia	976|Bacteroidetes	S	Protein of unknown function (DUF1501)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1501
BYD3_k127_2588349_17	1237149.C900_01375	7.454e-73	256.0	COG3047@1|root,COG3047@2|Bacteria,4NMXC@976|Bacteroidetes,47PJK@768503|Cytophagia	976|Bacteroidetes	M	Outer membrane protein beta-barrel domain	-	-	-	-	-	-	-	-	-	-	-	-	OMP_b-brl_2
BYD3_k127_2588349_8	1237149.C900_01374	9.251e-113	376.0	2C85B@1|root,2ZAAM@2|Bacteria,4NKNU@976|Bacteroidetes,47P2W@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_2588349_6	929562.Emtol_2295	3.575e-124	406.0	COG0812@1|root,COG0812@2|Bacteria,4NE78@976|Bacteroidetes,47KJJ@768503|Cytophagia	976|Bacteroidetes	M	Cell wall formation	murB	-	1.3.1.98	ko:K00075	ko00520,ko00550,ko01100,map00520,map00550,map01100	-	R03191,R03192	RC02639	ko00000,ko00001,ko01000,ko01011	-	-	-	FAD_binding_4,MurB_C
BYD3_k127_2588349_28	388413.ALPR1_06895	2.459e-08	60.0	2EQZ1@1|root,33IIQ@2|Bacteria,4NXHA@976|Bacteroidetes,47T71@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_2588349_16	1279009.ADICEAN_01394	1.134e-81	274.0	COG2131@1|root,COG2131@2|Bacteria,4NM48@976|Bacteroidetes,47P6P@768503|Cytophagia	976|Bacteroidetes	F	PFAM Cytidine and deoxycytidylate deaminase zinc-binding region	comEB	-	3.5.4.12	ko:K01493	ko00240,ko01100,map00240,map01100	M00429	R01663	RC00074	ko00000,ko00001,ko00002,ko01000,ko02044	-	-	-	dCMP_cyt_deam_1
BYD3_k127_2588349_21	1237149.C900_02479	6.905e-63	220.0	COG0457@1|root,COG0457@2|Bacteria,4NQ40@976|Bacteroidetes,47XP3@768503|Cytophagia	976|Bacteroidetes	S	Protein of unknown function (DUF2911)	-	-	-	-	-	-	-	-	-	-	-	-	DUF2911
BYD3_k127_2588349_25	1237149.C900_02061	1.773e-30	126.0	2DGJ8@1|root,2ZW7H@2|Bacteria,4P7SP@976|Bacteroidetes	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_2588349_10	1454007.JAUG01000065_gene4705	1.914e-110	362.0	COG2133@1|root,COG2133@2|Bacteria,4NGMS@976|Bacteroidetes,1IRD5@117747|Sphingobacteriia	976|Bacteroidetes	G	Domain of Unknown Function (DUF1080)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1080
BYD3_k127_2588349_4	1237149.C900_02472	2.653e-170	542.0	COG2133@1|root,COG2133@2|Bacteria,4NDV1@976|Bacteroidetes,47MXD@768503|Cytophagia	976|Bacteroidetes	G	Glucose / Sorbosone dehydrogenase	-	-	-	-	-	-	-	-	-	-	-	-	GSDH
BYD3_k127_2588349_0	1237149.C900_02470	1.148e-275	860.0	COG0488@1|root,COG0488@2|Bacteria,4NG1W@976|Bacteroidetes,47KHA@768503|Cytophagia	976|Bacteroidetes	S	ABC transporter	-	-	-	ko:K06158	-	-	-	-	ko00000,ko03012	-	-	-	ABC_tran,ABC_tran_CTD,ABC_tran_Xtn
BYD3_k127_2588349_5	1237149.C900_02467	2.685e-129	427.0	COG5276@1|root,COG5276@2|Bacteria,4NG4W@976|Bacteroidetes,47K9R@768503|Cytophagia	976|Bacteroidetes	S	LVIVD repeat	-	-	-	-	-	-	-	-	-	-	-	-	LVIVD
BYD3_k127_2588349_27	929562.Emtol_2188	1.822e-14	87.0	COG3203@1|root,COG3203@2|Bacteria,4PN39@976|Bacteroidetes,47Y8B@768503|Cytophagia	976|Bacteroidetes	M	Outer membrane protein beta-barrel domain	-	-	-	-	-	-	-	-	-	-	-	-	OMP_b-brl_2
BYD3_k127_2588349_22	1124780.ANNU01000061_gene907	2.6e-59	210.0	COG1595@1|root,COG1595@2|Bacteria,4NQCH@976|Bacteroidetes,47QG6@768503|Cytophagia	976|Bacteroidetes	K	TIGRFAM RNA polymerase sigma factor, sigma-70 family	-	-	-	ko:K03088	-	-	-	-	ko00000,ko03021	-	-	-	Sigma70_r2,Sigma70_r4_2
BYD3_k127_2588349_9	1237149.C900_02464	3.865e-111	373.0	28HE2@1|root,2Z7QJ@2|Bacteria,4NFBA@976|Bacteroidetes,47MAE@768503|Cytophagia	976|Bacteroidetes	S	Domain of unknown function (DUF5103)	-	-	-	-	-	-	-	-	-	-	-	-	DUF5103
BYD3_k127_2588349_12	1124780.ANNU01000066_gene375	4.071e-104	344.0	COG1583@1|root,COG1583@2|Bacteria,4NJ54@976|Bacteroidetes,47MMT@768503|Cytophagia	976|Bacteroidetes	L	PFAM CRISPR associated protein Cas6	-	-	-	ko:K19091	-	-	-	-	ko00000,ko01000,ko02048	-	-	-	Cas_Cas6
BYD3_k127_2588349_2	1237149.C900_02461	1.761e-182	577.0	COG0012@1|root,COG0012@2|Bacteria,4NF7N@976|Bacteroidetes,47KXT@768503|Cytophagia	976|Bacteroidetes	J	ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner	ychF	-	-	ko:K06942	-	-	-	-	ko00000,ko03009	-	-	-	MMR_HSR1,YchF-GTPase_C
BYD3_k127_2588349_24	1237149.C900_05084	2.061e-49	178.0	2ASD9@1|root,31HSR@2|Bacteria,4NQ71@976|Bacteroidetes,47R7K@768503|Cytophagia	976|Bacteroidetes	S	Protein of unknown function (DUF3276)	-	-	-	-	-	-	-	-	-	-	-	-	DUF3276
BYD3_k127_2588349_7	1237149.C900_05083	7.429e-124	403.0	COG1721@1|root,COG1721@2|Bacteria,4NG0C@976|Bacteroidetes,47JTH@768503|Cytophagia	976|Bacteroidetes	S	protein (some members contain a von Willebrand factor type A (vWA) domain)	-	-	-	-	-	-	-	-	-	-	-	-	DUF58
BYD3_k127_2588349_20	1279009.ADICEAN_01172	6.519e-66	226.0	COG0437@1|root,COG0437@2|Bacteria,4PKQE@976|Bacteroidetes,47XYY@768503|Cytophagia	976|Bacteroidetes	C	4Fe-4S binding domain	fdx	-	-	-	-	-	-	-	-	-	-	-	Fer4_7,Fer4_8
BYD3_k127_2588349_13	1189612.A33Q_3107	8.996e-103	344.0	COG1012@1|root,COG1012@2|Bacteria,4NEEZ@976|Bacteroidetes,47K6Q@768503|Cytophagia	976|Bacteroidetes	C	PFAM Acyl-CoA reductase (LuxC)	-	-	-	-	-	-	-	-	-	-	-	-	LuxC
BYD3_k127_2588349_23	1237149.C900_04906	8.235e-51	184.0	2AFHA@1|root,315HT@2|Bacteria,4NQ5F@976|Bacteroidetes,47VEE@768503|Cytophagia	976|Bacteroidetes	S	23S rRNA-intervening sequence protein	-	-	-	-	-	-	-	-	-	-	-	-	23S_rRNA_IVP
BYD3_k127_2588349_18	1237149.C900_01452	3.898e-70	273.0	COG4932@1|root,COG4932@2|Bacteria	2|Bacteria	M	domain protein	-	-	-	-	-	-	-	-	-	-	-	-	Alpha-L-AF_C,CHU_C,DUF11,DUF5011,Gram_pos_anchor,Laminin_G_3,SdrD_B
BYD3_k127_2588349_19	313606.M23134_06175	9.751e-68	265.0	COG3386@1|root,COG4932@1|root,COG3386@2|Bacteria,COG4932@2|Bacteria,4NN56@976|Bacteroidetes,47Q8D@768503|Cytophagia	976|Bacteroidetes	M	amine dehydrogenase activity	-	-	-	-	-	-	-	-	-	-	-	-	CHU_C,VCBS
BYD3_k127_2588349_26	991.IW20_22775	6.1e-22	114.0	COG4932@1|root,COG5184@1|root,COG4932@2|Bacteria,COG5184@2|Bacteria,4PKBH@976|Bacteroidetes,1IAJ4@117743|Flavobacteriia,2P0JQ@237|Flavobacterium	2|Bacteria	DZ	regulator of chromosome condensation, RCC1	sprB	-	-	-	-	-	-	-	-	-	-	-	Big_2,CHU_C,DUF11,SprB
BYD3_k127_2605617_19	1237149.C900_05864	3.159e-128	426.0	28KQM@1|root,2ZA8D@2|Bacteria,4NH80@976|Bacteroidetes,47JWY@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_2605617_37	1237149.C900_05865	2.398e-73	268.0	28KQM@1|root,2ZA8D@2|Bacteria,4NH80@976|Bacteroidetes,47JWY@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_2605617_44	1237149.C900_05866	8.949e-49	177.0	COG2947@1|root,COG2947@2|Bacteria,4NNQG@976|Bacteroidetes,47QAF@768503|Cytophagia	976|Bacteroidetes	S	EVE domain	-	-	-	-	-	-	-	-	-	-	-	-	EVE
BYD3_k127_2605617_25	1237149.C900_05868	4.611e-114	376.0	COG0859@1|root,COG0859@2|Bacteria,4NEPH@976|Bacteroidetes,47MA4@768503|Cytophagia	976|Bacteroidetes	M	PFAM glycosyl transferase family 9	-	-	-	ko:K02843	ko00540,ko01100,map00540,map01100	M00080	-	-	ko00000,ko00001,ko00002,ko01000,ko01003,ko01005	-	GT9	-	Glyco_transf_9
BYD3_k127_2605617_0	1237149.C900_03692	1.5e-323	998.0	COG0034@1|root,COG0034@2|Bacteria,4NFSM@976|Bacteroidetes,47JRN@768503|Cytophagia	976|Bacteroidetes	F	PFAM Glutamine amidotransferase, class-II	purF	-	2.4.2.14	ko:K00764	ko00230,ko00250,ko01100,ko01110,ko01130,map00230,map00250,map01100,map01110,map01130	M00048	R01072	RC00010,RC02724,RC02752	ko00000,ko00001,ko00002,ko01000,ko01002	-	-	-	GATase_6,GATase_7
BYD3_k127_2605617_21	1237149.C900_03691	6.418e-120	401.0	COG1007@1|root,COG1007@2|Bacteria,4NF94@976|Bacteroidetes,47JHI@768503|Cytophagia	976|Bacteroidetes	C	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient	-	-	1.6.5.3	ko:K00343	ko00190,ko01100,map00190,map01100	M00144	R11945	RC00061	ko00000,ko00001,ko00002,ko01000	3.D.1	-	-	Proton_antipo_M
BYD3_k127_2605617_17	452471.Aasi_1456	4.115e-133	442.0	COG1008@1|root,COG1008@2|Bacteria,4NEJ1@976|Bacteroidetes,47MKB@768503|Cytophagia	976|Bacteroidetes	C	TIGRFAM proton-translocating NADH-quinone oxidoreductase, chain M	-	-	1.6.5.3	ko:K00342	ko00190,ko01100,map00190,map01100	M00144	R11945	RC00061	ko00000,ko00001,ko00002,ko01000	3.D.1	-	-	Oxidored_q5_N,Proton_antipo_M
BYD3_k127_2605617_11	1237149.C900_03689	7.179e-148	490.0	COG1009@1|root,COG1009@2|Bacteria,4NEBM@976|Bacteroidetes,47M8Q@768503|Cytophagia	976|Bacteroidetes	CP	NADH ubiquinone oxidoreductase subunit 5 (Chain L) multisubunit Na H antiporter, MnhA subunit	-	-	1.6.5.3	ko:K00341	ko00190,ko01100,map00190,map01100	M00144	R11945	RC00061	ko00000,ko00001,ko00002,ko01000	3.D.1	-	-	Proton_antipo_M,Proton_antipo_N
BYD3_k127_2605617_53	1185876.BN8_06396	2.076e-26	111.0	COG0713@1|root,COG0713@2|Bacteria,4NSR8@976|Bacteroidetes,47R5R@768503|Cytophagia	976|Bacteroidetes	C	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient	nuoK	-	1.6.5.3	ko:K00340	ko00190,ko01100,map00190,map01100	M00144	R11945	RC00061	ko00000,ko00001,ko00002,ko01000	3.D.1	-	-	Oxidored_q2
BYD3_k127_2605617_52	1237149.C900_03687	3.021e-28	121.0	COG0839@1|root,COG0839@2|Bacteria,4NNMC@976|Bacteroidetes,47PS1@768503|Cytophagia	976|Bacteroidetes	C	PFAM NADH-ubiquinone plastoquinone oxidoreductase chain 6	nuoJ	-	1.6.5.3	ko:K00339	ko00190,ko01100,map00190,map01100	M00144	R11945	RC00061	ko00000,ko00001,ko00002,ko01000	3.D.1	-	-	Oxidored_q3
BYD3_k127_2605617_36	1279009.ADICEAN_04003	5.318e-75	258.0	COG1143@1|root,COG1143@2|Bacteria,4NGWR@976|Bacteroidetes,47MDD@768503|Cytophagia	976|Bacteroidetes	C	4Fe-4S ferredoxin iron-sulfur binding domain protein	ndhI	-	1.6.5.3	ko:K00338	ko00190,ko01100,map00190,map01100	M00144	R11945	RC00061	ko00000,ko00001,ko00002,ko01000	3.D.1	-	-	Fer4,Fer4_7
BYD3_k127_2605617_10	1237149.C900_03685	2.064e-149	497.0	COG5002@1|root,COG5002@2|Bacteria,4PKMH@976|Bacteroidetes,47XWJ@768503|Cytophagia	976|Bacteroidetes	T	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase	-	-	-	-	-	-	-	-	-	-	-	-	HATPase_c,HisKA,HisKA_7TM,PAS_4,PAS_9,TPR_12
BYD3_k127_2605617_7	1237149.C900_03684	1.609e-164	525.0	COG1005@1|root,COG1005@2|Bacteria,4NGK7@976|Bacteroidetes,47JF2@768503|Cytophagia	976|Bacteroidetes	C	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone	nuoH	-	1.6.5.3	ko:K00337	ko00190,ko01100,map00190,map01100	M00144	R11945	RC00061	ko00000,ko00001,ko00002,ko01000	3.D.1	-	-	NADHdh
BYD3_k127_2605617_23	1237149.C900_03683	1.102e-115	378.0	COG0796@1|root,COG0796@2|Bacteria,4NG1C@976|Bacteroidetes,47MMI@768503|Cytophagia	976|Bacteroidetes	M	Provides the (R)-glutamate required for cell wall biosynthesis	murI	-	5.1.1.3	ko:K01776	ko00471,ko01100,map00471,map01100	-	R00260	RC00302	ko00000,ko00001,ko01000,ko01011	-	-	-	Asp_Glu_race
BYD3_k127_2605617_42	1124780.ANNU01000010_gene3645	1.826e-56	205.0	COG1512@1|root,COG1512@2|Bacteria	2|Bacteria	S	TPM domain	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_2605617_16	1124780.ANNU01000037_gene144	7.087e-140	450.0	COG0623@1|root,COG0623@2|Bacteria,4NEVE@976|Bacteroidetes,47KZ9@768503|Cytophagia	976|Bacteroidetes	I	Enoyl- acyl-carrier-protein reductase NADH	fabI	-	1.3.1.10,1.3.1.9	ko:K00208	ko00061,ko00333,ko00780,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01100,map01130,map01212	M00083,M00572	R01404,R04429,R04430,R04724,R04725,R04955,R04956,R04958,R04959,R04961,R04962,R04966,R04967,R04969,R04970,R07765,R10118,R10122,R11671	RC00052,RC00076,RC00120	ko00000,ko00001,ko00002,ko01000,ko01004	-	-	-	adh_short_C2
BYD3_k127_2605617_33	929703.KE386491_gene3175	1.069e-87	297.0	COG1947@1|root,COG1947@2|Bacteria,4NGFC@976|Bacteroidetes,47JG4@768503|Cytophagia	976|Bacteroidetes	I	Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol	ispE	GO:0003674,GO:0003824,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0044237,GO:0050515	2.7.1.148	ko:K00919	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	M00096	R05634	RC00002,RC01439	ko00000,ko00001,ko00002,ko01000	-	-	-	GHMP_kinases_C,GHMP_kinases_N
BYD3_k127_2605617_34	1237149.C900_03679	4.474e-86	295.0	COG0697@1|root,COG0697@2|Bacteria,4NE8D@976|Bacteroidetes,47JNH@768503|Cytophagia	976|Bacteroidetes	EG	PFAM EamA-like transporter family	-	-	-	-	-	-	-	-	-	-	-	-	EamA
BYD3_k127_2605617_15	1237149.C900_03678	6.683e-140	454.0	COG0795@1|root,COG0795@2|Bacteria,4NF8Y@976|Bacteroidetes,47JHT@768503|Cytophagia	976|Bacteroidetes	S	Permease YjgP YjgQ family	lptG	-	-	ko:K11720	ko02010,map02010	M00320	-	-	ko00000,ko00001,ko00002,ko02000	1.B.42.1	-	-	YjgP_YjgQ
BYD3_k127_2605617_5	1313301.AUGC01000014_gene2457	9.142e-195	613.0	COG0343@1|root,COG0343@2|Bacteria,4NE15@976|Bacteroidetes	976|Bacteroidetes	J	Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine)	tgt	-	2.4.2.29	ko:K00773	-	-	R03789,R10209	RC00063	ko00000,ko01000,ko03016	-	-	-	TGT
BYD3_k127_2605617_20	1048983.EL17_09325	2.575e-125	410.0	COG1609@1|root,COG1609@2|Bacteria,4NE81@976|Bacteroidetes,47P3S@768503|Cytophagia	976|Bacteroidetes	K	helix_turn _helix lactose operon repressor	-	-	-	ko:K02529	-	-	-	-	ko00000,ko03000	-	-	-	LacI,Peripla_BP_4
BYD3_k127_2605617_29	1237149.C900_03673	1.477e-107	360.0	COG1215@1|root,COG1215@2|Bacteria,4NESG@976|Bacteroidetes,47JZE@768503|Cytophagia	976|Bacteroidetes	M	PFAM Glycosyl transferase family 2	-	-	-	-	-	-	-	-	-	-	-	-	Glyco_tranf_2_3,Glycos_transf_2
BYD3_k127_2605617_31	1237149.C900_03672	3.051e-93	310.0	COG1595@1|root,COG1595@2|Bacteria,4NIRG@976|Bacteroidetes,47JCE@768503|Cytophagia	976|Bacteroidetes	K	Belongs to the sigma-70 factor family. ECF subfamily	-	-	-	ko:K03088	-	-	-	-	ko00000,ko03021	-	-	-	Sigma70_r2,Sigma70_r4_2
BYD3_k127_2605617_32	1237149.C900_03670	1.309e-88	297.0	COG0357@1|root,COG0357@2|Bacteria,4NEJG@976|Bacteroidetes,47KEA@768503|Cytophagia	976|Bacteroidetes	J	Specifically methylates the N7 position of a guanine in 16S rRNA	rsmG	GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016435,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0036265,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0070043,GO:0070475,GO:0070476,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360	2.1.1.170	ko:K03501	-	-	-	-	ko00000,ko01000,ko03009,ko03036	-	-	-	GidB
BYD3_k127_2605617_55	1123248.KB893315_gene3037	8.517e-17	87.0	2EHHG@1|root,33B9E@2|Bacteria,4NXY9@976|Bacteroidetes,1IUFY@117747|Sphingobacteriia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_2605617_24	886377.Murru_0169	1.275e-115	379.0	28K2C@1|root,2Z9RQ@2|Bacteria,4NJP3@976|Bacteroidetes,1IIZ9@117743|Flavobacteriia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_2605617_3	760192.Halhy_6227	7.857e-233	731.0	COG0671@1|root,COG0671@2|Bacteria,4NGYP@976|Bacteroidetes,1IR1B@117747|Sphingobacteriia	976|Bacteroidetes	I	PAP2 superfamily	-	-	-	-	-	-	-	-	-	-	-	-	PAP2
BYD3_k127_2605617_38	1237149.C900_05843	2.016e-72	252.0	COG0204@1|root,COG0204@2|Bacteria,4NG5R@976|Bacteroidetes,47QIE@768503|Cytophagia	976|Bacteroidetes	I	Phosphate acyltransferases	plsC	-	2.3.1.51	ko:K00655	ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110	M00089	R02241,R09381	RC00004,RC00037,RC00039	ko00000,ko00001,ko00002,ko01000,ko01004	-	-	-	Acyltransferase
BYD3_k127_2605617_13	1250232.JQNJ01000001_gene3750	3.28e-142	461.0	COG0144@1|root,COG0144@2|Bacteria,4NEV7@976|Bacteroidetes,1HXH7@117743|Flavobacteriia	976|Bacteroidetes	J	Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB NOP family	rsmB	-	2.1.1.176	ko:K03500	-	-	-	-	ko00000,ko01000,ko03009	-	-	-	Methyltr_RsmB-F,Methyltr_RsmF_N
BYD3_k127_2605617_27	700598.Niako_6919	5.549e-111	366.0	COG1262@1|root,COG1262@2|Bacteria,4NEUZ@976|Bacteroidetes,1IS6V@117747|Sphingobacteriia	976|Bacteroidetes	S	Sulfatase-modifying factor enzyme 1	-	-	-	-	-	-	-	-	-	-	-	-	Cytochrom_NNT,FGE-sulfatase
BYD3_k127_2605617_4	925409.KI911562_gene1243	1.06e-211	665.0	COG0673@1|root,COG0673@2|Bacteria,4NF9M@976|Bacteroidetes,1IPWB@117747|Sphingobacteriia	976|Bacteroidetes	S	Oxidoreductase domain protein	-	-	-	-	-	-	-	-	-	-	-	-	GFO_IDH_MocA,TAT_signal
BYD3_k127_2605617_14	1121904.ARBP01000006_gene3817	9.591e-141	456.0	COG3622@1|root,COG3622@2|Bacteria,4NG74@976|Bacteroidetes,47K7Z@768503|Cytophagia	976|Bacteroidetes	G	PFAM Xylose isomerase-like TIM barrel	-	-	5.3.1.22	ko:K01816	ko00630,ko01100,map00630,map01100	-	R01394	RC00511	ko00000,ko00001,ko01000	-	-	-	AP_endonuc_2
BYD3_k127_2605617_2	1237149.C900_05842	7.624e-296	935.0	COG0457@1|root,COG4995@1|root,COG0457@2|Bacteria,COG4995@2|Bacteria,4NKPZ@976|Bacteroidetes,47NIF@768503|Cytophagia	976|Bacteroidetes	S	CHAT domain	-	-	-	-	-	-	-	-	-	-	-	-	CHAT,TPR_10,TPR_12,TPR_8
BYD3_k127_2605617_9	926556.Echvi_0939	2.624e-150	485.0	COG0613@1|root,COG0613@2|Bacteria,4PMKK@976|Bacteroidetes,47NYR@768503|Cytophagia	976|Bacteroidetes	S	PHP domain protein	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_2605617_12	926549.KI421517_gene3457	6.215e-146	468.0	COG0667@1|root,COG0667@2|Bacteria,4NF06@976|Bacteroidetes,47K7K@768503|Cytophagia	976|Bacteroidetes	C	Aldo/keto reductase family	-	-	-	-	-	-	-	-	-	-	-	-	Aldo_ket_red
BYD3_k127_2605617_47	118161.KB235922_gene4391	3.767e-45	169.0	COG1611@1|root,COG1611@2|Bacteria,1G5P3@1117|Cyanobacteria,3VK1P@52604|Pleurocapsales	1117|Cyanobacteria	S	TIGRFAM TIGR00725 family protein	-	-	3.2.2.10	ko:K06966	ko00230,ko00240,map00230,map00240	-	R00182,R00510	RC00063,RC00318	ko00000,ko00001,ko01000	-	-	-	Lysine_decarbox
BYD3_k127_2605617_57	1218108.KB908292_gene1772	2.709e-09	63.0	2APBA@1|root,31EDH@2|Bacteria,4NPIT@976|Bacteroidetes,1I25X@117743|Flavobacteriia	976|Bacteroidetes	S	Putative prokaryotic signal transducing protein	-	-	-	-	-	-	-	-	-	-	-	-	DUF2007
BYD3_k127_2605617_43	485918.Cpin_0921	2.355e-49	181.0	COG4502@1|root,COG4502@2|Bacteria,4NQDT@976|Bacteroidetes,1ISVS@117747|Sphingobacteriia	976|Bacteroidetes	S	5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C)	-	-	-	-	-	-	-	-	-	-	-	-	NT5C
BYD3_k127_2605617_6	1123277.KB893173_gene1827	8.543e-176	583.0	COG2304@1|root,COG2304@2|Bacteria,4NFX3@976|Bacteroidetes,47JM8@768503|Cytophagia	976|Bacteroidetes	S	von Willebrand factor, type A	-	-	-	ko:K07114	-	-	-	-	ko00000,ko02000	1.A.13.2.2,1.A.13.2.3	-	-	DUF3829,VWA,VWA_2
BYD3_k127_2605617_49	313595.P700755_000294	1.797e-42	162.0	COG1943@1|root,COG1943@2|Bacteria,4NPWC@976|Bacteroidetes,1I28P@117743|Flavobacteriia,4C4FE@83612|Psychroflexus	976|Bacteroidetes	L	Transposase IS200 like	-	-	-	-	-	-	-	-	-	-	-	-	Y1_Tnp
BYD3_k127_2605617_40	1237149.C900_02642	4.407e-63	220.0	COG1595@1|root,COG1595@2|Bacteria,4NSED@976|Bacteroidetes,47Q3K@768503|Cytophagia	976|Bacteroidetes	K	Sigma-70, region 4	-	-	-	ko:K03088	-	-	-	-	ko00000,ko03021	-	-	-	Sigma70_r2,Sigma70_r4_2
BYD3_k127_2605617_41	1237149.C900_02644	9.171e-59	209.0	2CC1H@1|root,33P9C@2|Bacteria	2|Bacteria	S	Domain of unknown function (DUF4252)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4252
BYD3_k127_2605617_22	1237149.C900_02648	3.375e-118	387.0	COG1131@1|root,COG1131@2|Bacteria,4NFNM@976|Bacteroidetes,47Q1V@768503|Cytophagia	976|Bacteroidetes	V	AAA domain, putative AbiEii toxin, Type IV TA system	-	-	-	ko:K01990	-	M00254	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	ABC_tran
BYD3_k127_2605617_39	1237149.C900_02649	2.8e-64	229.0	COG1277@1|root,COG1277@2|Bacteria,4NEES@976|Bacteroidetes,47WZW@768503|Cytophagia	976|Bacteroidetes	S	Excinuclease ABC subunit B	-	-	-	-	-	-	-	-	-	-	-	-	ABC2_membrane_2,ABC2_membrane_4
BYD3_k127_2605617_1	153721.MYP_3046	1.474e-320	1010.0	COG0587@1|root,COG0587@2|Bacteria,4NE2R@976|Bacteroidetes,47JNI@768503|Cytophagia	976|Bacteroidetes	L	DNA polymerase III alpha subunit	-	-	2.7.7.7	ko:K02337	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	M00260	R00375,R00376,R00377,R00378	RC02795	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	-	-	-	DNA_pol3_alpha,HHH_6,PHP
BYD3_k127_2605617_56	1121898.Q766_19895	6.524e-10	67.0	COG1514@1|root,COG1514@2|Bacteria,4PCEA@976|Bacteroidetes,1ID8T@117743|Flavobacteriia,2NXR1@237|Flavobacterium	976|Bacteroidetes	J	2'-5' RNA ligase superfamily	-	-	-	-	-	-	-	-	-	-	-	-	2_5_RNA_ligase2
BYD3_k127_2605617_8	485918.Cpin_6871	2.247e-151	488.0	COG0389@1|root,COG0389@2|Bacteria,4NE9N@976|Bacteroidetes,1INW1@117747|Sphingobacteriia	976|Bacteroidetes	L	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII	dinB	-	2.7.7.7	ko:K02346	-	-	-	-	ko00000,ko01000,ko03400	-	-	-	IMS,IMS_C,IMS_HHH
BYD3_k127_2605617_35	1237149.C900_04765	8.749e-84	285.0	COG1974@1|root,COG1974@2|Bacteria,4PKQ7@976|Bacteroidetes,47P4U@768503|Cytophagia	976|Bacteroidetes	K	Helix-turn-helix XRE-family like proteins	-	-	-	-	-	-	-	-	-	-	-	-	HTH_19,HTH_3,Peptidase_S24
BYD3_k127_2605617_50	1279009.ADICEAN_01016	3.554e-38	146.0	COG4319@1|root,COG4319@2|Bacteria,4NTMK@976|Bacteroidetes,47X83@768503|Cytophagia	976|Bacteroidetes	S	SnoaL-like domain	-	-	-	-	-	-	-	-	-	-	-	-	DUF4440
BYD3_k127_2605617_46	1123057.P872_20375	3.066e-45	177.0	2C85A@1|root,32801@2|Bacteria,4NS08@976|Bacteroidetes,47QWI@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_2605617_28	468059.AUHA01000004_gene2375	1.462e-107	356.0	2BXBG@1|root,33WQF@2|Bacteria,4P3CB@976|Bacteroidetes	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_2605617_45	643867.Ftrac_3659	4.981e-48	175.0	COG1959@1|root,COG1959@2|Bacteria,4NNN2@976|Bacteroidetes,47P8M@768503|Cytophagia	976|Bacteroidetes	K	TIGRFAM Transcriptional regulator, Rrf2	cymR	-	-	-	-	-	-	-	-	-	-	-	Rrf2
BYD3_k127_2605617_26	1124780.ANNU01000033_gene1296	6.666e-112	363.0	COG0450@1|root,COG0450@2|Bacteria,4NEZZ@976|Bacteroidetes,47KEE@768503|Cytophagia	976|Bacteroidetes	O	PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen	-	-	1.11.1.15	ko:K03386	ko04214,map04214	-	-	-	ko00000,ko00001,ko01000,ko04147	-	-	-	1-cysPrx_C,AhpC-TSA
BYD3_k127_2605617_30	926549.KI421517_gene1067	1.334e-105	354.0	COG0654@1|root,COG0654@2|Bacteria,4NGIU@976|Bacteroidetes,47NYU@768503|Cytophagia	976|Bacteroidetes	CH	FAD binding domain	-	-	-	-	-	-	-	-	-	-	-	-	FAD_binding_3
BYD3_k127_2605617_18	1047013.AQSP01000095_gene2303	1.464e-129	443.0	COG0577@1|root,COG0577@2|Bacteria	2|Bacteria	V	efflux transmembrane transporter activity	-	-	-	ko:K02004	-	M00258	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	FtsX,MacB_PCD
BYD3_k127_2605617_48	929556.Solca_0692	6.149e-44	165.0	COG0454@1|root,COG0456@2|Bacteria,4NTK3@976|Bacteroidetes	976|Bacteroidetes	K	FR47-like protein	-	-	-	ko:K03825	-	-	-	-	ko00000,ko01000	-	-	-	Acetyltransf_1,Acetyltransf_7
BYD3_k127_2654558_16	1237149.C900_04782	1.904e-10	65.0	2BWZA@1|root,32RGQ@2|Bacteria,4NQBI@976|Bacteroidetes,47V7S@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_2654558_6	926549.KI421517_gene2293	5.967e-103	341.0	COG0457@1|root,COG0457@2|Bacteria,4NH2F@976|Bacteroidetes,47N0J@768503|Cytophagia	976|Bacteroidetes	S	ASPIC and UnbV	-	-	-	-	-	-	-	-	-	-	-	-	UnbV_ASPIC,VCBS
BYD3_k127_2654558_14	471854.Dfer_0776	2.524e-12	70.0	COG1595@1|root,COG1595@2|Bacteria,4NSXH@976|Bacteroidetes	2|Bacteria	K	Belongs to the sigma-70 factor family. ECF subfamily	-	-	-	ko:K03088	-	-	-	-	ko00000,ko03021	-	-	-	Glyco_hydro_cc,Sigma70_r2,Sigma70_r4_2
BYD3_k127_2654558_15	1356852.N008_09560	7.469e-11	64.0	COG1595@1|root,COG1595@2|Bacteria,4NSXH@976|Bacteroidetes,47RE2@768503|Cytophagia	976|Bacteroidetes	K	RNA polymerase sigma factor, sigma-70 family	-	-	-	ko:K03088	-	-	-	-	ko00000,ko03021	-	-	-	Sigma70_r2,Sigma70_r4_2
BYD3_k127_2654558_8	1237149.C900_02624	3.456e-93	311.0	2C8XG@1|root,2Z7PK@2|Bacteria,4NEU8@976|Bacteroidetes,47P85@768503|Cytophagia	976|Bacteroidetes	S	Protein of unknown function (DUF4197)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4197
BYD3_k127_2654558_7	880071.Fleli_1610	1.926e-93	323.0	COG1752@1|root,COG1752@2|Bacteria,4NPBQ@976|Bacteroidetes,47QP5@768503|Cytophagia	976|Bacteroidetes	S	Patatin-like phospholipase	-	-	-	ko:K07001	-	-	-	-	ko00000	-	-	-	Patatin
BYD3_k127_2654558_0	1123248.KB893326_gene1336	8.721e-143	458.0	COG2120@1|root,COG2120@2|Bacteria,4NEDJ@976|Bacteroidetes,1IV4B@117747|Sphingobacteriia	976|Bacteroidetes	S	GlcNAc-PI de-N-acetylase	-	-	-	-	-	-	-	-	-	-	-	-	PIG-L
BYD3_k127_2654558_1	1408433.JHXV01000012_gene3920	2.129e-138	451.0	COG2059@1|root,COG2059@2|Bacteria,4NNZ1@976|Bacteroidetes,1HXXV@117743|Flavobacteriia	976|Bacteroidetes	P	chromate transporter, chromate ion transporter (CHR) family	-	-	-	ko:K07240	-	-	-	-	ko00000,ko02000	2.A.51.1	-	-	Chromate_transp
BYD3_k127_2654558_4	1121481.AUAS01000004_gene1363	1.119e-107	355.0	COG2755@1|root,COG2755@2|Bacteria,4NHV1@976|Bacteroidetes,47KAU@768503|Cytophagia	976|Bacteroidetes	E	GDSL-like Lipase/Acylhydrolase	-	-	-	-	-	-	-	-	-	-	-	-	Lipase_GDSL_2
BYD3_k127_2654558_3	700598.Niako_5167	4.24e-120	399.0	COG2124@1|root,COG2124@2|Bacteria,4NG9Z@976|Bacteroidetes,1IUUD@117747|Sphingobacteriia	976|Bacteroidetes	C	Cytochrome P450	-	-	-	-	-	-	-	-	-	-	-	-	p450
BYD3_k127_2654558_11	485918.Cpin_4167	2.97e-66	230.0	COG2318@1|root,COG2318@2|Bacteria,4NNMT@976|Bacteroidetes,1IXUX@117747|Sphingobacteriia	976|Bacteroidetes	S	DinB family	-	-	-	-	-	-	-	-	-	-	-	-	DinB
BYD3_k127_2654558_12	471854.Dfer_5719	2.595e-35	140.0	2EEXX@1|root,338RA@2|Bacteria,4NV50@976|Bacteroidetes,47WS6@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_2654558_13	1453498.LG45_12015	1.74e-16	86.0	COG1714@1|root,COG1714@2|Bacteria,4NVM1@976|Bacteroidetes,1IA43@117743|Flavobacteriia	976|Bacteroidetes	S	RDD family	-	-	-	-	-	-	-	-	-	-	-	-	RDD
BYD3_k127_2654558_10	379066.GAU_0174	7.062e-73	252.0	COG3340@1|root,COG3340@2|Bacteria,1ZUA9@142182|Gemmatimonadetes	142182|Gemmatimonadetes	E	Peptidase family S51	-	-	-	-	-	-	-	-	-	-	-	-	Peptidase_S51
BYD3_k127_2654558_9	485918.Cpin_5156	2.469e-73	251.0	COG4297@1|root,COG4297@2|Bacteria,4NNG0@976|Bacteroidetes,1ISDM@117747|Sphingobacteriia	976|Bacteroidetes	S	Cupin	-	-	-	-	-	-	-	-	-	-	-	-	Cupin_1,Cupin_2
BYD3_k127_2654558_2	929562.Emtol_1373	1.303e-123	406.0	COG3828@1|root,COG3828@2|Bacteria,4NFMU@976|Bacteroidetes,47K27@768503|Cytophagia	976|Bacteroidetes	S	Trehalose utilisation	-	-	-	-	-	-	-	-	-	-	-	-	ThuA
BYD3_k127_2654558_5	1121373.KB903666_gene1317	1.575e-104	351.0	COG2935@1|root,COG2935@2|Bacteria,4NGKN@976|Bacteroidetes,47PCC@768503|Cytophagia	976|Bacteroidetes	O	Belongs to the R-transferase family	ate	-	2.3.2.29	ko:K21420	-	-	R11547,R11548	RC00064	ko00000,ko01000	-	-	-	ATE_C,ATE_N
BYD3_k127_2656679_22	468059.AUHA01000003_gene1708	5.004e-19	89.0	COG0500@1|root,COG0500@2|Bacteria,4NVGC@976|Bacteroidetes,1IU64@117747|Sphingobacteriia	976|Bacteroidetes	Q	methyltransferase	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_2656679_27	926562.Oweho_2292	1.429e-09	59.0	COG0640@1|root,COG0640@2|Bacteria,4NQCU@976|Bacteroidetes,1I3US@117743|Flavobacteriia,2PB4V@246874|Cryomorphaceae	976|Bacteroidetes	K	PFAM Bacterial regulatory protein, arsR family	-	-	-	-	-	-	-	-	-	-	-	-	HTH_20,HTH_5
BYD3_k127_2656679_20	1122621.ATZA01000003_gene1480	2.191e-32	126.0	COG0640@1|root,COG0640@2|Bacteria,4NQCU@976|Bacteroidetes,1ISSX@117747|Sphingobacteriia	976|Bacteroidetes	K	PFAM Bacterial regulatory protein, arsR family	-	-	-	-	-	-	-	-	-	-	-	-	HTH_20,HTH_5
BYD3_k127_2656679_9	760192.Halhy_0534	5.931e-90	298.0	COG3832@1|root,COG3832@2|Bacteria,4NFVK@976|Bacteroidetes,1IS58@117747|Sphingobacteriia	976|Bacteroidetes	S	Activator of Hsp90 ATPase homolog 1-like protein	-	-	-	-	-	-	-	-	-	-	-	-	AHSA1
BYD3_k127_2656679_3	509635.N824_05185	1.816e-154	489.0	2DBAY@1|root,2Z84S@2|Bacteria,4NGXD@976|Bacteroidetes,1IWW9@117747|Sphingobacteriia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	DUF1835
BYD3_k127_2656679_8	1550091.JROE01000002_gene793	1.531e-94	312.0	COG0262@1|root,COG0262@2|Bacteria,4NMP3@976|Bacteroidetes,1IRXK@117747|Sphingobacteriia	976|Bacteroidetes	H	PFAM RibD C-terminal domain	-	-	1.5.1.3	ko:K00287	ko00670,ko00790,ko01100,ko01523,map00670,map00790,map01100,map01523	M00126,M00840	R00936,R00937,R00939,R00940,R02235,R02236,R11765	RC00109,RC00110,RC00158	ko00000,ko00001,ko00002,ko01000	-	-	-	RibD_C
BYD3_k127_2656679_6	376686.Fjoh_2003	2.025e-105	349.0	COG0583@1|root,COG0583@2|Bacteria,4NGHS@976|Bacteroidetes,1I0KH@117743|Flavobacteriia,2NTMX@237|Flavobacterium	976|Bacteroidetes	K	Transcriptional regulator	-	-	-	-	-	-	-	-	-	-	-	-	HTH_1,LysR_substrate
BYD3_k127_2656679_15	1121481.AUAS01000018_gene480	6.435e-57	201.0	2CJ4Q@1|root,32S97@2|Bacteria,4NTZM@976|Bacteroidetes,47X4A@768503|Cytophagia	976|Bacteroidetes	S	EthD domain	-	-	-	-	-	-	-	-	-	-	-	-	EthD
BYD3_k127_2656679_24	445961.IW15_07960	2.542e-11	65.0	COG3232@1|root,COG3232@2|Bacteria,4NQRH@976|Bacteroidetes,1I396@117743|Flavobacteriia,3ZS1V@59732|Chryseobacterium	976|Bacteroidetes	E	5-carboxymethyl-2-hydroxymuconate isomerase	-	-	5.3.3.10	ko:K01826	ko00350,ko01120,ko01220,map00350,map01120,map01220	M00533	R04379,R04482	RC01141,RC01162	ko00000,ko00001,ko00002,ko01000	-	-	-	-
BYD3_k127_2656679_25	172045.KS04_09475	2.926e-11	64.0	COG3232@1|root,COG3232@2|Bacteria,4NQRH@976|Bacteroidetes,1I4MJ@117743|Flavobacteriia,34RRQ@308865|Elizabethkingia	976|Bacteroidetes	E	5-carboxymethyl-2-hydroxymuconate isomerase	-	-	5.3.3.10	ko:K01826	ko00350,ko01120,ko01220,map00350,map01120,map01220	M00533	R04379,R04482	RC01141,RC01162	ko00000,ko00001,ko00002,ko01000	-	-	-	-
BYD3_k127_2656679_7	485913.Krac_1339	7.3e-98	327.0	COG2267@1|root,COG2267@2|Bacteria	2|Bacteria	I	carboxylic ester hydrolase activity	-	-	-	-	-	-	-	-	-	-	-	-	Abhydrolase_1,Abhydrolase_6
BYD3_k127_2656679_18	68219.JNXI01000032_gene7021	5.791e-41	158.0	COG1018@1|root,COG1018@2|Bacteria,2IN34@201174|Actinobacteria	201174|Actinobacteria	C	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_2656679_14	755732.Fluta_3018	2.483e-61	218.0	COG0664@1|root,COG0664@2|Bacteria,4NFIS@976|Bacteroidetes,1HXJ2@117743|Flavobacteriia,2PBNT@246874|Cryomorphaceae	976|Bacteroidetes	K	COGs COG0664 cAMP-binding protein - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase	-	-	-	ko:K01420	-	-	-	-	ko00000,ko03000	-	-	-	HTH_Crp_2,cNMP_binding
BYD3_k127_2656679_19	485918.Cpin_5720	7.966e-41	152.0	2C82G@1|root,32RK9@2|Bacteria,4NSXV@976|Bacteroidetes,1IYD5@117747|Sphingobacteriia	976|Bacteroidetes	S	Protein of unknown function (DUF4242)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4242
BYD3_k127_2656679_5	1340493.JNIF01000003_gene1695	6.926e-111	373.0	2CEN7@1|root,2Z9XA@2|Bacteria,3Y7AS@57723|Acidobacteria	57723|Acidobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_2656679_28	866536.Belba_2765	3.267e-07	55.0	COG0582@1|root,COG0582@2|Bacteria,4PP5M@976|Bacteroidetes,47YGE@768503|Cytophagia	976|Bacteroidetes	L	Transposase zinc-binding domain	-	-	-	-	-	-	-	-	-	-	-	-	Y2_Tnp,Zn_Tnp_IS91
BYD3_k127_2656679_13	760192.Halhy_0551	5.257e-63	219.0	2CJ4Q@1|root,32S97@2|Bacteria,4NTZM@976|Bacteroidetes,1ITPH@117747|Sphingobacteriia	976|Bacteroidetes	S	Ethyl tert-butyl ether degradation EthD	-	-	-	-	-	-	-	-	-	-	-	-	EthD
BYD3_k127_2656679_26	1144312.PMI09_04204	8.404e-10	63.0	2DRQB@1|root,33CKR@2|Bacteria,1MZI3@1224|Proteobacteria,2UDVN@28211|Alphaproteobacteria,4BFEI@82115|Rhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_2656679_16	553177.CAPSP0001_0498	1.469e-54	208.0	COG5263@1|root,COG5263@2|Bacteria,4NJ6B@976|Bacteroidetes,1HX7Q@117743|Flavobacteriia,1ETIA@1016|Capnocytophaga	976|Bacteroidetes	S	WG containing repeat	-	-	-	-	-	-	-	-	-	-	-	-	WG_beta_rep
BYD3_k127_2656679_0	1121887.AUDK01000023_gene3422	1.156e-201	632.0	COG0454@1|root,COG0456@2|Bacteria,4NFWE@976|Bacteroidetes	976|Bacteroidetes	K	Psort location Cytoplasmic, score 8.96	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_2656679_2	314278.NB231_07462	6.069e-155	496.0	COG2230@1|root,COG2230@2|Bacteria,1QY55@1224|Proteobacteria,1RYEN@1236|Gammaproteobacteria	1236|Gammaproteobacteria	M	Putative methyltransferase	-	-	-	-	-	-	-	-	-	-	-	-	Methyltransf_31
BYD3_k127_2656679_4	1349785.BAUG01000039_gene2104	5.294e-122	400.0	COG4122@1|root,COG4122@2|Bacteria,4NJV1@976|Bacteroidetes,1HYRV@117743|Flavobacteriia	976|Bacteroidetes	S	Methyltransferase domain	-	-	-	-	-	-	-	-	-	-	-	-	Methyltransf_24
BYD3_k127_2656679_30	1463901.JOIY01000044_gene151	4.622e-06	58.0	COG0596@1|root,COG0596@2|Bacteria,2GNFU@201174|Actinobacteria	201174|Actinobacteria	S	Alpha beta hydrolase	-	-	-	-	-	-	-	-	-	-	-	-	Abhydrolase_1,Abhydrolase_6
BYD3_k127_2656679_1	1123248.KB893328_gene933	6.533e-160	516.0	COG0657@1|root,COG0657@2|Bacteria,4NIQ0@976|Bacteroidetes	976|Bacteroidetes	I	esterase	-	-	-	-	-	-	-	-	-	-	-	-	Abhydrolase_3,Peptidase_S9
BYD3_k127_2656679_29	189426.PODO_02295	1.634e-06	60.0	2CH44@1|root,32S57@2|Bacteria,1VCKH@1239|Firmicutes,4HKXX@91061|Bacilli,26XPU@186822|Paenibacillaceae	91061|Bacilli	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_2656679_11	700598.Niako_4637	1.583e-66	241.0	2CYFR@1|root,32T44@2|Bacteria,4P6IN@976|Bacteroidetes,1IZDY@117747|Sphingobacteriia	976|Bacteroidetes	S	Protein of unknown function (DUF998)	-	-	-	-	-	-	-	-	-	-	-	-	DUF998
BYD3_k127_2656679_23	700598.Niako_4836	1.116e-14	76.0	COG3832@1|root,COG3832@2|Bacteria,4NN6Z@976|Bacteroidetes	976|Bacteroidetes	S	Pfam Activator of Hsp90 ATPase	-	-	-	-	-	-	-	-	-	-	-	-	AHSA1
BYD3_k127_2656679_31	269798.CHU_1121	9.793e-06	48.0	COG3832@1|root,COG3832@2|Bacteria,4NN6Z@976|Bacteroidetes	976|Bacteroidetes	S	Pfam Activator of Hsp90 ATPase	-	-	-	-	-	-	-	-	-	-	-	-	AHSA1
BYD3_k127_2656679_10	761193.Runsl_4030	6.165e-84	286.0	COG1247@1|root,COG1247@2|Bacteria	2|Bacteria	M	phosphinothricin N-acetyltransferase activity	yhhY	GO:0003674,GO:0003824,GO:0004596,GO:0005575,GO:0005622,GO:0005623,GO:0006464,GO:0006473,GO:0006474,GO:0006807,GO:0008080,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016407,GO:0016410,GO:0016740,GO:0016746,GO:0016747,GO:0019538,GO:0031248,GO:0031365,GO:0032991,GO:0034212,GO:0036211,GO:0043170,GO:0043412,GO:0043543,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044464,GO:0051604,GO:0071704,GO:1901564,GO:1902493,GO:1902494,GO:1990234	2.1.2.9	ko:K00604,ko:K03825	ko00670,ko00970,map00670,map00970	-	R03940	RC00026,RC00165	ko00000,ko00001,ko01000	-	-	-	Acetyltransf_1,Acetyltransf_4
BYD3_k127_2656679_12	1356852.N008_17970	2.087e-63	230.0	COG0793@1|root,COG0793@2|Bacteria,4NIQJ@976|Bacteroidetes,47QIN@768503|Cytophagia	976|Bacteroidetes	M	Peptidase family S41	-	-	-	-	-	-	-	-	-	-	-	-	Peptidase_S41
BYD3_k127_2656679_17	317936.Nos7107_3526	1.431e-46	169.0	2AFVV@1|root,315YK@2|Bacteria,1GHAK@1117|Cyanobacteria,1HSK7@1161|Nostocales	1117|Cyanobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_2732205_11	1122225.AULQ01000010_gene181	0.0001133	44.0	COG0399@1|root,COG0399@2|Bacteria,4NEBI@976|Bacteroidetes,1HXWJ@117743|Flavobacteriia	976|Bacteroidetes	E	Belongs to the DegT DnrJ EryC1 family	degT	-	-	-	-	-	-	-	-	-	-	-	DegT_DnrJ_EryC1
BYD3_k127_2732205_8	1453500.AT05_02455	6.83e-93	308.0	COG0110@1|root,COG0110@2|Bacteria,4NENC@976|Bacteroidetes,1HZ0I@117743|Flavobacteriia	976|Bacteroidetes	S	Hexapeptide transferase	-	-	2.3.1.201	ko:K13018	ko00520,map00520	-	R10100	RC00004,RC00166	ko00000,ko00001,ko01000,ko01005	-	-	-	Hexapep,Hexapep_2
BYD3_k127_2732205_2	1048983.EL17_11185	2.061e-164	522.0	COG0673@1|root,COG0673@2|Bacteria,4PITU@976|Bacteroidetes,47KDG@768503|Cytophagia	976|Bacteroidetes	S	Oxidoreductase family, C-terminal alpha/beta domain	-	-	-	-	-	-	-	-	-	-	-	-	GFO_IDH_MocA,GFO_IDH_MocA_C
BYD3_k127_2732205_1	1237149.C900_03582	2.211e-167	530.0	COG0451@1|root,COG0451@2|Bacteria,4NIMH@976|Bacteroidetes	976|Bacteroidetes	M	Male sterility protein	-	-	-	-	-	-	-	-	-	-	-	-	GDP_Man_Dehyd
BYD3_k127_2732205_3	266748.HY04_10090	5.987e-155	498.0	COG0399@1|root,COG0399@2|Bacteria,4NFAI@976|Bacteroidetes,1HX99@117743|Flavobacteriia,3ZT4N@59732|Chryseobacterium	976|Bacteroidetes	E	DegT/DnrJ/EryC1/StrS aminotransferase family	-	-	-	-	-	-	-	-	-	-	-	-	DegT_DnrJ_EryC1
BYD3_k127_2732205_4	865937.Gilli_0695	1.434e-126	414.0	COG2089@1|root,COG2089@2|Bacteria,4NEKD@976|Bacteroidetes,1I0MG@117743|Flavobacteriia,2P6VS@244698|Gillisia	976|Bacteroidetes	M	SAF	neuB	-	2.5.1.101,2.5.1.56	ko:K01654,ko:K18430	ko00520,ko01100,map00520,map01100	-	R01804,R04435,R10304	RC00159	ko00000,ko00001,ko01000	-	-	-	NeuB,SAF
BYD3_k127_2732205_7	1120966.AUBU01000003_gene1585	3.88e-114	379.0	COG0381@1|root,COG0381@2|Bacteria,4NFTG@976|Bacteroidetes,47TAJ@768503|Cytophagia	976|Bacteroidetes	M	UDP-N-acetylglucosamine 2-epimerase	-	-	3.2.1.184	ko:K18429	ko00520,map00520	-	R10187	RC00005,RC00288	ko00000,ko00001,ko01000	-	-	-	Epimerase_2
BYD3_k127_2732205_5	929556.Solca_4309	4.507e-126	412.0	COG0517@1|root,COG1208@1|root,COG0517@2|Bacteria,COG1208@2|Bacteria,4NFDB@976|Bacteroidetes,1IPMP@117747|Sphingobacteriia	976|Bacteroidetes	JM	Nucleotidyl transferase	gmhB	-	2.7.7.71	ko:K15669	ko00540,map00540	-	R09772	RC00002	ko00000,ko00001,ko01000	-	-	-	CBS,NTP_transferase
BYD3_k127_2732205_6	1449126.JQKL01000005_gene907	1.107e-116	384.0	COG0673@1|root,COG0673@2|Bacteria,1UTD8@1239|Firmicutes,24CI2@186801|Clostridia	186801|Clostridia	S	Oxidoreductase family, NAD-binding Rossmann fold	-	-	-	-	-	-	-	-	-	-	-	-	GFO_IDH_MocA
BYD3_k127_2732205_10	1449126.JQKL01000005_gene908	4.806e-64	228.0	COG1861@1|root,COG1861@2|Bacteria	2|Bacteria	M	Spore coat polysaccharide biosynthesis protein F CMP-KDO synthetase	spsF	-	2.7.7.92	ko:K07257,ko:K21750	-	-	-	-	ko00000,ko01000	-	-	-	CTP_transf_3,NeuB
BYD3_k127_2732205_0	1127692.HMPREF9075_01963	3.748e-182	579.0	COG0001@1|root,COG0001@2|Bacteria,4NDXG@976|Bacteroidetes,1HWQS@117743|Flavobacteriia,1ER0C@1016|Capnocytophaga	976|Bacteroidetes	H	glutamate-1-semialdehyde	-	-	5.4.3.8	ko:K01845	ko00860,ko01100,ko01110,ko01120,map00860,map01100,map01110,map01120	M00121	R02272	RC00677	ko00000,ko00001,ko00002,ko01000,ko01007	-	-	-	Aminotran_3,CTP_transf_3
BYD3_k127_2732205_9	1492738.FEM21_14480	2.136e-73	252.0	COG1028@1|root,COG1028@2|Bacteria,4NGR3@976|Bacteroidetes,1I4T7@117743|Flavobacteriia,2NTAZ@237|Flavobacterium	976|Bacteroidetes	IQ	short-chain dehydrogenase	-	-	1.1.1.100	ko:K00059	ko00061,ko00333,ko00780,ko01040,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01040,map01100,map01130,map01212	M00083,M00572	R04533,R04534,R04536,R04543,R04566,R04953,R04964,R07759,R07763,R10116,R10120,R11671	RC00029,RC00117	ko00000,ko00001,ko00002,ko01000,ko01004	-	-	-	adh_short,adh_short_C2
BYD3_k127_2741237_0	376686.Fjoh_3283	0.0	1137.0	COG3119@1|root,COG3119@2|Bacteria,4NEBN@976|Bacteroidetes,1HZSK@117743|Flavobacteriia,2NT8T@237|Flavobacterium	976|Bacteroidetes	P	Sulfatase	-	-	3.1.6.1	ko:K01130	ko00140,ko00600,map00140,map00600	-	R03980,R04856	RC00128,RC00231	ko00000,ko00001,ko01000	-	-	-	Sulfatase
BYD3_k127_2741237_14	1123008.KB905693_gene1330	3.707e-54	194.0	COG4319@1|root,COG4319@2|Bacteria,4NT6G@976|Bacteroidetes,2FTV9@200643|Bacteroidia,22YRG@171551|Porphyromonadaceae	976|Bacteroidetes	S	Calcium/calmodulin dependent protein kinase II association domain	-	-	-	-	-	-	-	-	-	-	-	-	DUF4440
BYD3_k127_2741237_6	1123008.KB905693_gene1331	3.531e-137	440.0	COG2207@1|root,COG2207@2|Bacteria,4NMPG@976|Bacteroidetes,2G2TB@200643|Bacteroidia,22XRK@171551|Porphyromonadaceae	976|Bacteroidetes	K	helix_turn_helix, arabinose operon control protein	-	-	-	-	-	-	-	-	-	-	-	-	AraC_binding,HTH_18
BYD3_k127_2741237_3	1123277.KB893172_gene573	3.335e-220	707.0	COG0577@1|root,COG0577@2|Bacteria,4NDUK@976|Bacteroidetes,47NUS@768503|Cytophagia	976|Bacteroidetes	V	MacB-like periplasmic core domain	-	-	-	ko:K02004	-	M00258	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	FtsX,MacB_PCD
BYD3_k127_2741237_5	1191523.MROS_0977	8.044e-147	477.0	COG4225@1|root,COG4225@2|Bacteria	2|Bacteria	S	unsaturated chondroitin disaccharide hydrolase activity	yteR	-	-	-	-	-	-	-	-	-	-	-	DUF4861,Glyco_hydro_88
BYD3_k127_2741237_7	1121904.ARBP01000011_gene1535	3.917e-113	374.0	COG1735@1|root,COG1735@2|Bacteria,4NJYF@976|Bacteroidetes,47NZQ@768503|Cytophagia	976|Bacteroidetes	S	Phosphotriesterase family	php	-	-	ko:K07048	-	-	-	-	ko00000	-	-	-	PTE
BYD3_k127_2741237_18	485918.Cpin_6021	1.061e-21	98.0	COG3832@1|root,COG3832@2|Bacteria,4NPE8@976|Bacteroidetes,1IVFA@117747|Sphingobacteriia	976|Bacteroidetes	S	Activator of Hsp90 ATPase homolog 1-like protein	-	-	-	-	-	-	-	-	-	-	-	-	AHSA1
BYD3_k127_2741237_2	1237149.C900_04044	5.68e-221	711.0	COG0577@1|root,COG0577@2|Bacteria,4NDUK@976|Bacteroidetes,47JJN@768503|Cytophagia	976|Bacteroidetes	V	FtsX-like permease family	-	-	-	ko:K02004	-	M00258	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	FtsX,MacB_PCD
BYD3_k127_2741237_20	1121904.ARBP01000011_gene1535	5.66e-07	54.0	COG1735@1|root,COG1735@2|Bacteria,4NJYF@976|Bacteroidetes,47NZQ@768503|Cytophagia	976|Bacteroidetes	S	Phosphotriesterase family	php	-	-	ko:K07048	-	-	-	-	ko00000	-	-	-	PTE
BYD3_k127_2741237_9	509635.N824_18585	1.663e-104	342.0	COG0262@1|root,COG0262@2|Bacteria,4P1JF@976|Bacteroidetes	976|Bacteroidetes	H	bifunctional deaminase-reductase domain protein	-	-	-	-	-	-	-	-	-	-	-	-	RibD_C
BYD3_k127_2741237_12	172045.KS04_07485	1.609e-68	239.0	COG0262@1|root,COG0262@2|Bacteria,4NPJF@976|Bacteroidetes,1I4ZF@117743|Flavobacteriia,34RCM@308865|Elizabethkingia	976|Bacteroidetes	H	RibD C-terminal domain	-	-	-	-	-	-	-	-	-	-	-	-	RibD_C
BYD3_k127_2741237_13	269798.CHU_2068	1.1e-67	235.0	COG4572@1|root,COG4572@2|Bacteria,4PM1W@976|Bacteroidetes,47XZW@768503|Cytophagia	976|Bacteroidetes	S	Cation transport regulator	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_2741237_17	504472.Slin_2874	1.525e-29	122.0	2D2Z4@1|root,32TDX@2|Bacteria,4NVF7@976|Bacteroidetes,47S93@768503|Cytophagia	976|Bacteroidetes	S	Protein of unknown function (DUF3024)	-	-	-	-	-	-	-	-	-	-	-	-	DUF3024
BYD3_k127_2741237_21	1123058.KB894262_gene1432	9.202e-05	45.0	2AWH3@1|root,31NDJ@2|Bacteria,4NRPZ@976|Bacteroidetes,1I4Y0@117743|Flavobacteriia	976|Bacteroidetes	S	DoxX-like family	-	-	-	-	-	-	-	-	-	-	-	-	DoxX_3
BYD3_k127_2741237_15	929556.Solca_2236	5.991e-51	183.0	COG2010@1|root,COG2010@2|Bacteria,4NRFW@976|Bacteroidetes,1IU4G@117747|Sphingobacteriia	976|Bacteroidetes	C	Cytochrome C oxidase, cbb3-type, subunit III	-	-	-	-	-	-	-	-	-	-	-	-	Cytochrome_CBB3
BYD3_k127_2741237_10	929556.Solca_2235	3.93e-97	325.0	2ECDZ@1|root,336C7@2|Bacteria,4NXCE@976|Bacteroidetes	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_2741237_1	929556.Solca_2234	4.765e-232	723.0	COG5557@1|root,COG5557@2|Bacteria,4NE3X@976|Bacteroidetes,1INKZ@117747|Sphingobacteriia	976|Bacteroidetes	C	PFAM Polysulphide reductase, NrfD	-	-	-	ko:K00185	-	-	-	-	ko00000	5.A.3	-	-	NrfD
BYD3_k127_2741237_4	929556.Solca_2233	9.645e-180	565.0	COG0437@1|root,COG0437@2|Bacteria,4NI8R@976|Bacteroidetes	976|Bacteroidetes	C	4Fe-4S dicluster domain	-	-	-	ko:K00184	-	-	-	-	ko00000	5.A.3	-	-	Fer4_11
BYD3_k127_2741237_8	929556.Solca_2231	1.592e-107	356.0	COG3637@1|root,COG3637@2|Bacteria,4NE33@976|Bacteroidetes	976|Bacteroidetes	M	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_2741237_16	929556.Solca_2230	1.372e-35	139.0	COG2010@1|root,COG2010@2|Bacteria,4NYN7@976|Bacteroidetes	976|Bacteroidetes	C	Cytochrome c	-	-	-	-	-	-	-	-	-	-	-	-	PSCyt1
BYD3_k127_2741237_11	929556.Solca_2229	2.024e-72	253.0	COG2353@1|root,COG2353@2|Bacteria	2|Bacteria	O	YceI-like domain	-	-	-	-	-	-	-	-	-	-	-	-	CarboxypepD_reg,YceI
BYD3_k127_2840231_11	376686.Fjoh_3283	3.826e-73	249.0	COG3119@1|root,COG3119@2|Bacteria,4NEBN@976|Bacteroidetes,1HZSK@117743|Flavobacteriia,2NT8T@237|Flavobacterium	976|Bacteroidetes	P	Sulfatase	-	-	3.1.6.1	ko:K01130	ko00140,ko00600,map00140,map00600	-	R03980,R04856	RC00128,RC00231	ko00000,ko00001,ko01000	-	-	-	Sulfatase
BYD3_k127_2840231_9	1185876.BN8_00896	3.084e-105	371.0	COG0577@1|root,COG0577@2|Bacteria,4NDUK@976|Bacteroidetes,47P60@768503|Cytophagia	976|Bacteroidetes	V	MacB-like periplasmic core domain	-	-	-	-	-	-	-	-	-	-	-	-	FtsX,MacB_PCD
BYD3_k127_2840231_6	1279009.ADICEAN_01399	1.01e-130	432.0	COG0671@1|root,COG0671@2|Bacteria,4NF9W@976|Bacteroidetes,47M2K@768503|Cytophagia	976|Bacteroidetes	I	PFAM Phosphatidic acid phosphatase type 2 haloperoxidase	-	-	-	-	-	-	-	-	-	-	-	-	PAP2
BYD3_k127_2840231_13	1185876.BN8_06481	1.703e-68	247.0	COG2972@1|root,COG2972@2|Bacteria,4NH1Q@976|Bacteroidetes,47PMI@768503|Cytophagia	976|Bacteroidetes	T	Histidine kinase	-	-	-	-	-	-	-	-	-	-	-	-	His_kinase
BYD3_k127_2840231_12	1185876.BN8_06481	7.259e-70	250.0	COG2972@1|root,COG2972@2|Bacteria,4NH1Q@976|Bacteroidetes,47PMI@768503|Cytophagia	976|Bacteroidetes	T	Histidine kinase	-	-	-	-	-	-	-	-	-	-	-	-	His_kinase
BYD3_k127_2840231_10	1185876.BN8_06479	3.301e-75	259.0	COG3279@1|root,COG3279@2|Bacteria,4NI3K@976|Bacteroidetes,47PDV@768503|Cytophagia	976|Bacteroidetes	T	LytTr DNA-binding domain	-	-	-	-	-	-	-	-	-	-	-	-	LytTR,Response_reg
BYD3_k127_2840231_15	1121403.AUCV01000047_gene1024	2.572e-35	136.0	COG0657@1|root,COG0657@2|Bacteria,1R41U@1224|Proteobacteria,42YKQ@68525|delta/epsilon subdivisions,2WU3G@28221|Deltaproteobacteria	28221|Deltaproteobacteria	I	acetylesterase activity	-	-	-	-	-	-	-	-	-	-	-	-	Peptidase_S9
BYD3_k127_2840231_0	696281.Desru_2195	0.0	1214.0	COG0574@1|root,COG3848@1|root,COG0574@2|Bacteria,COG3848@2|Bacteria,1UIEA@1239|Firmicutes,25EJM@186801|Clostridia,2610V@186807|Peptococcaceae	186801|Clostridia	GT	pyruvate phosphate dikinase, PEP	ppdK	-	2.7.9.1,2.7.9.2	ko:K01006,ko:K01007	ko00620,ko00680,ko00710,ko00720,ko01100,ko01120,ko01200,map00620,map00680,map00710,map00720,map01100,map01120,map01200	M00169,M00171,M00172,M00173,M00374	R00199,R00206	RC00002,RC00015	ko00000,ko00001,ko00002,ko01000	-	-	-	PEP-utilizers,PEP-utilizers_C,PPDK_N
BYD3_k127_2840231_20	485918.Cpin_2959	3.262e-07	52.0	COG1846@1|root,COG1846@2|Bacteria,4NNK0@976|Bacteroidetes,1IT2W@117747|Sphingobacteriia	976|Bacteroidetes	K	Regulatory protein MarR	emrR	-	-	-	-	-	-	-	-	-	-	-	MarR,MarR_2
BYD3_k127_2840231_14	485918.Cpin_2959	3.471e-62	216.0	COG1846@1|root,COG1846@2|Bacteria,4NNK0@976|Bacteroidetes,1IT2W@117747|Sphingobacteriia	976|Bacteroidetes	K	Regulatory protein MarR	emrR	-	-	-	-	-	-	-	-	-	-	-	MarR,MarR_2
BYD3_k127_2840231_18	1120949.KB903322_gene2817	4.16e-20	97.0	COG4583@1|root,COG4583@2|Bacteria,2HJE7@201174|Actinobacteria	201174|Actinobacteria	E	Sarcosine oxidase, gamma subunit	soxG	-	1.5.3.1	ko:K00305	ko00260,ko01100,map00260,map01100	-	R00610	RC00060,RC00557	ko00000,ko00001,ko01000	-	-	-	SoxG
BYD3_k127_2840231_2	358823.DF19_21205	2.107e-257	821.0	COG0404@1|root,COG0446@1|root,COG4311@1|root,COG0404@2|Bacteria,COG0446@2|Bacteria,COG4311@2|Bacteria,2GMBK@201174|Actinobacteria	201174|Actinobacteria	E	Belongs to the GcvT family	soxA	-	1.5.3.1	ko:K00302	ko00260,ko01100,map00260,map01100	-	R00610	RC00060,RC00557	ko00000,ko00001,ko01000	-	-	-	Fer2_4,GCV_T,GCV_T_C,Pyr_redox_2,SoxD
BYD3_k127_2840231_16	235985.BBPN01000050_gene8393	2.449e-31	125.0	COG4311@1|root,COG4311@2|Bacteria,2IQIZ@201174|Actinobacteria,2NJF4@228398|Streptacidiphilus	201174|Actinobacteria	E	Sarcosine oxidase, delta subunit family	soxD	-	1.5.3.1	ko:K00304	ko00260,ko01100,map00260,map01100	-	R00610	RC00060,RC00557	ko00000,ko00001,ko01000	-	-	-	SoxD
BYD3_k127_2840231_3	1463917.JODC01000002_gene869	9.486e-195	614.0	COG0665@1|root,COG0665@2|Bacteria,2I8QS@201174|Actinobacteria	201174|Actinobacteria	E	Sarcosine oxidase	soxB	-	1.5.3.1	ko:K00303	ko00260,ko01100,map00260,map01100	-	R00610	RC00060,RC00557	ko00000,ko00001,ko01000	-	-	-	DAO
BYD3_k127_2840231_19	991.IW20_06790	4.843e-20	93.0	2CCSR@1|root,32RSC@2|Bacteria,4NT8X@976|Bacteroidetes,1IKXG@117743|Flavobacteriia,2NWU7@237|Flavobacterium	976|Bacteroidetes	S	23S rRNA-intervening sequence protein	-	-	-	-	-	-	-	-	-	-	-	-	23S_rRNA_IVP
BYD3_k127_2840231_1	1123023.JIAI01000001_gene6384	8.413e-295	927.0	COG0404@1|root,COG0665@1|root,COG0404@2|Bacteria,COG0665@2|Bacteria,2GNCW@201174|Actinobacteria,4DZP9@85010|Pseudonocardiales	201174|Actinobacteria	E	Belongs to the GcvT family	-	-	-	-	-	-	-	-	-	-	-	-	DAO,FAO_M,GCV_T,GCV_T_C
BYD3_k127_2840231_7	460265.Mnod_3396	8.8e-122	402.0	COG4638@1|root,COG4638@2|Bacteria,1MWXW@1224|Proteobacteria,2TSJ5@28211|Alphaproteobacteria,1JR44@119045|Methylobacteriaceae	28211|Alphaproteobacteria	P	PFAM Rieske 2Fe-2S domain protein	-	-	-	ko:K00479	-	-	-	-	ko00000	-	-	-	Rieske,Ring_hydroxyl_A
BYD3_k127_2840231_17	1120966.AUBU01000001_gene751	1.77e-23	104.0	2CCSR@1|root,32RSC@2|Bacteria,4NT8X@976|Bacteroidetes	976|Bacteroidetes	S	23S rRNA-intervening sequence protein	-	-	-	-	-	-	-	-	-	-	-	-	23S_rRNA_IVP
BYD3_k127_2840231_5	886293.Sinac_5704	1.492e-146	479.0	COG0531@1|root,COG0531@2|Bacteria,2J2BE@203682|Planctomycetes	203682|Planctomycetes	E	Amino acid permease	-	-	-	-	-	-	-	-	-	-	-	-	AA_permease_2
BYD3_k127_2840231_4	1380394.JADL01000004_gene6001	2.083e-190	606.0	COG1012@1|root,COG1012@2|Bacteria,1MU1V@1224|Proteobacteria,2TQR1@28211|Alphaproteobacteria,2JPZI@204441|Rhodospirillales	204441|Rhodospirillales	C	belongs to the aldehyde dehydrogenase family	betB	-	1.2.1.8	ko:K00130	ko00260,ko01100,map00260,map01100	M00555	R02565,R02566	RC00080	ko00000,ko00001,ko00002,ko01000	-	-	-	Aldedh
BYD3_k127_2840231_8	1265505.ATUG01000002_gene1789	3.591e-111	362.0	COG2303@1|root,COG2303@2|Bacteria,1MV19@1224|Proteobacteria,42N4C@68525|delta/epsilon subdivisions,2WJIH@28221|Deltaproteobacteria,2MJAH@213118|Desulfobacterales	28221|Deltaproteobacteria	E	GMC oxidoreductase	-	-	1.1.99.1	ko:K00108	ko00260,ko01100,map00260,map01100	M00555	R01025	RC00087	ko00000,ko00001,ko00002,ko01000	-	-	-	GMC_oxred_C,GMC_oxred_N
BYD3_k127_2902078_0	504472.Slin_5653	3.122e-304	959.0	COG4888@1|root,COG4888@2|Bacteria,4NEE8@976|Bacteroidetes,47JJ5@768503|Cytophagia	976|Bacteroidetes	S	ASPIC and UnbV	-	-	-	-	-	-	-	-	-	-	-	-	UnbV_ASPIC,VCBS
BYD3_k127_2902078_1	760192.Halhy_4822	1.407e-48	177.0	COG0702@1|root,COG0702@2|Bacteria,4PKHQ@976|Bacteroidetes,1IQ8Z@117747|Sphingobacteriia	976|Bacteroidetes	GM	PFAM RagB SusD	-	-	-	ko:K21572	-	-	-	-	ko00000,ko02000	8.A.46.1,8.A.46.3	-	-	SusD-like_3,SusD_RagB
BYD3_k127_2938604_2	1358423.N180_00485	5.257e-257	797.0	COG0129@1|root,COG0129@2|Bacteria,4NEKY@976|Bacteroidetes,1IQEN@117747|Sphingobacteriia	976|Bacteroidetes	EG	Belongs to the IlvD Edd family	-	-	-	-	-	-	-	-	-	-	-	-	ILVD_EDD
BYD3_k127_2938604_1	760192.Halhy_0742	3.135e-259	804.0	COG0673@1|root,COG0673@2|Bacteria,4NDYI@976|Bacteroidetes,1IP4M@117747|Sphingobacteriia	976|Bacteroidetes	S	Oxidoreductase family, NAD-binding Rossmann fold	-	-	-	-	-	-	-	-	-	-	-	-	GFO_IDH_MocA,GFO_IDH_MocA_C,TAT_signal
BYD3_k127_2938604_0	1185876.BN8_03977	0.0	1157.0	COG2010@1|root,COG2133@1|root,COG2010@2|Bacteria,COG2133@2|Bacteria,4NEZ5@976|Bacteroidetes,47JIJ@768503|Cytophagia	976|Bacteroidetes	C	Membrane-bound dehydrogenase domain protein	-	-	-	-	-	-	-	-	-	-	-	-	Cytochrome_CBB3
BYD3_k127_2938604_5	761193.Runsl_4991	1.218e-156	501.0	COG1082@1|root,COG1082@2|Bacteria,4NIDT@976|Bacteroidetes,47JR4@768503|Cytophagia	976|Bacteroidetes	G	Xylose isomerase-like TIM barrel	-	-	-	-	-	-	-	-	-	-	-	-	AP_endonuc_2
BYD3_k127_2938604_6	504472.Slin_3987	1.648e-132	426.0	COG1028@1|root,COG1028@2|Bacteria,4NFDX@976|Bacteroidetes,47NTC@768503|Cytophagia	976|Bacteroidetes	IQ	KR domain	-	-	1.1.1.69	ko:K00046	-	-	-	-	ko00000,ko01000	-	-	-	adh_short_C2
BYD3_k127_2938604_3	504472.Slin_3988	1.413e-217	681.0	COG2271@1|root,COG2271@2|Bacteria,4NGCR@976|Bacteroidetes,47KGE@768503|Cytophagia	976|Bacteroidetes	G	Major Facilitator Superfamily	-	-	-	ko:K08194	-	-	-	-	ko00000,ko02000	2.A.1.14.7	-	-	MFS_1
BYD3_k127_2938604_7	1123278.KB893555_gene4004	2.208e-111	364.0	COG1028@1|root,COG1028@2|Bacteria,4NGYN@976|Bacteroidetes,47MXU@768503|Cytophagia	976|Bacteroidetes	IQ	KR domain	-	-	1.1.1.401	ko:K21883	ko00051,ko01120,map00051,map01120	-	R11339	RC00089	ko00000,ko00001,ko01000	-	-	-	adh_short_C2
BYD3_k127_2938604_4	1121481.AUAS01000001_gene4744	7.113e-188	594.0	COG1506@1|root,COG1506@2|Bacteria,4PKQ3@976|Bacteroidetes,47XYQ@768503|Cytophagia	976|Bacteroidetes	E	lipolytic protein G-D-S-L family	-	-	-	-	-	-	-	-	-	-	-	-	CBM9_1,Peptidase_S9
BYD3_k127_2938604_9	760192.Halhy_6259	5.533e-26	116.0	COG2856@1|root,COG2856@2|Bacteria	2|Bacteria	E	Zn peptidase	-	-	-	-	-	-	-	-	-	-	-	-	Fic,Peptidase_M78
BYD3_k127_2938604_8	1121904.ARBP01000001_gene5961	2.445e-53	195.0	2DMN1@1|root,32SKS@2|Bacteria,4NRHF@976|Bacteroidetes,47W7S@768503|Cytophagia	976|Bacteroidetes	S	Carbohydrate family 9 binding domain-like	-	-	-	-	-	-	-	-	-	-	-	-	CBM9_1
BYD3_k127_2938604_11	1237149.C900_02392	2.366e-05	55.0	COG2834@1|root,COG2834@2|Bacteria,4NHV3@976|Bacteroidetes,47RIH@768503|Cytophagia	976|Bacteroidetes	M	Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4292,LolA_like
BYD3_k127_2957894_6	926549.KI421517_gene3579	5.673e-173	550.0	COG2133@1|root,COG2133@2|Bacteria,4NEZC@976|Bacteroidetes,47KSC@768503|Cytophagia	976|Bacteroidetes	G	PFAM Glucose Sorbosone dehydrogenase	-	-	-	ko:K21430	-	-	-	-	ko00000,ko01000	-	-	-	GSDH
BYD3_k127_2957894_4	1123276.KB893245_gene1439	2.327e-230	716.0	COG1063@1|root,COG1063@2|Bacteria,4NIU2@976|Bacteroidetes,47MH0@768503|Cytophagia	976|Bacteroidetes	E	Alcohol dehydrogenase GroES-like domain	-	-	1.2.1.46	ko:K00148	ko00625,ko00680,ko01100,ko01120,ko01200,map00625,map00680,map01100,map01120,map01200	-	R00604	RC00188	ko00000,ko00001,ko01000	-	-	-	ADH_N,ADH_zinc_N
BYD3_k127_2957894_12	1317122.ATO12_01120	6.549e-57	208.0	COG1526@1|root,COG1526@2|Bacteria,4NFJB@976|Bacteroidetes,1I19N@117743|Flavobacteriia,2YI2A@290174|Aquimarina	976|Bacteroidetes	C	FdhD/NarQ family	fdhD	-	-	ko:K02379	-	-	-	-	ko00000	-	-	-	FdhD-NarQ
BYD3_k127_2957894_1	717774.Marme_2599	2.112e-268	845.0	COG0243@1|root,COG0243@2|Bacteria,1MU6B@1224|Proteobacteria,1RNXW@1236|Gammaproteobacteria,1XIPP@135619|Oceanospirillales	135619|Oceanospirillales	C	Belongs to the prokaryotic molybdopterin-containing oxidoreductase family	-	-	-	-	-	-	-	-	-	-	-	-	Molybdopterin,Molydop_binding
BYD3_k127_2957894_7	1117379.BABA_04409	2.015e-156	498.0	COG3865@1|root,COG3865@2|Bacteria,1TP7B@1239|Firmicutes,4HDPM@91061|Bacilli,1ZR5K@1386|Bacillus	91061|Bacilli	S	3-demethylubiquinone-9 3-methyltransferase	-	-	-	-	-	-	-	-	-	-	-	-	3-dmu-9_3-mt
BYD3_k127_2957894_9	1123278.KB893570_gene2446	4.395e-129	453.0	COG1629@1|root,COG2373@1|root,COG1629@2|Bacteria,COG2373@2|Bacteria,4NG2S@976|Bacteroidetes,47XIT@768503|Cytophagia	976|Bacteroidetes	P	Carboxypeptidase regulatory-like domain	-	-	-	-	-	-	-	-	-	-	-	-	A2M,A2M_N,A2M_comp,A2M_recep,CarbopepD_reg_2,Plug,Thiol-ester_cl
BYD3_k127_2957894_5	1166018.FAES_2376	1.319e-212	669.0	COG1053@1|root,COG1053@2|Bacteria,4PNKD@976|Bacteroidetes,47YPR@768503|Cytophagia	976|Bacteroidetes	C	FAD dependent oxidoreductase	-	-	-	-	-	-	-	-	-	-	-	-	FAD_oxidored
BYD3_k127_2957894_8	1166018.FAES_2377	4.94e-145	465.0	COG1735@1|root,COG1735@2|Bacteria,4NG0K@976|Bacteroidetes,47MZ3@768503|Cytophagia	976|Bacteroidetes	S	Phosphotriesterase family	-	-	-	ko:K07048	-	-	-	-	ko00000	-	-	-	PTE
BYD3_k127_2957894_14	866536.Belba_1280	1.008e-10	68.0	2C56D@1|root,328TV@2|Bacteria,4NQMW@976|Bacteroidetes,47QT2@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	DUF3659
BYD3_k127_2957894_15	529884.Rhola_00002980	4.244e-09	64.0	2A6I6@1|root,30VBK@2|Bacteria,2H6F2@201174|Actinobacteria,4FSCC@85023|Microbacteriaceae	201174|Actinobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_2957894_3	471854.Dfer_0651	9.656e-236	733.0	COG2355@1|root,COG2355@2|Bacteria,4NEBG@976|Bacteroidetes,47TDH@768503|Cytophagia	976|Bacteroidetes	E	Membrane dipeptidase (Peptidase family M19)	-	-	3.4.13.19	ko:K01273	-	-	-	-	ko00000,ko00537,ko01000,ko01002,ko04147	-	-	-	Peptidase_M19
BYD3_k127_2957894_2	1121481.AUAS01000002_gene3464	4.921e-256	793.0	28KEJ@1|root,2Z9QB@2|Bacteria,4P1U9@976|Bacteroidetes,47TF2@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_2957894_16	468059.AUHA01000007_gene2708	1.166e-06	50.0	COG2003@1|root,COG2003@2|Bacteria,4NRCM@976|Bacteroidetes,1ISFA@117747|Sphingobacteriia	976|Bacteroidetes	L	DNA repair	-	-	-	ko:K03630	-	-	-	-	ko00000	-	-	-	RadC
BYD3_k127_2957894_13	1121481.AUAS01000019_gene525	1.255e-32	131.0	2E32S@1|root,32Y2Z@2|Bacteria,4NW5U@976|Bacteroidetes,47SIY@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_2957894_18	1150600.ADIARSV_3424	0.0007844	42.0	2BTEI@1|root,32NKR@2|Bacteria,4P9PN@976|Bacteroidetes,1IZXK@117747|Sphingobacteriia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_2957894_0	1237149.C900_04077	1.402e-309	960.0	COG0539@1|root,COG0539@2|Bacteria,4NDW9@976|Bacteroidetes,47JD4@768503|Cytophagia	976|Bacteroidetes	J	thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence	rpsA	-	-	ko:K02945	ko03010,map03010	M00178	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	S1
BYD3_k127_2957894_10	1237149.C900_04079	6.38e-128	422.0	COG1538@1|root,COG1538@2|Bacteria,4NU3A@976|Bacteroidetes,47P0C@768503|Cytophagia	976|Bacteroidetes	MU	Outer membrane efflux protein	-	-	-	-	-	-	-	-	-	-	-	-	OEP
BYD3_k127_2957894_11	1237149.C900_04080	1.485e-122	395.0	COG1136@1|root,COG1136@2|Bacteria,4NEC5@976|Bacteroidetes,47N33@768503|Cytophagia	976|Bacteroidetes	V	ABC transporter	-	-	-	-	-	-	-	-	-	-	-	-	ABC_tran
BYD3_k127_297764_4	388413.ALPR1_07930	1.559e-18	88.0	COG1629@1|root,COG4771@2|Bacteria,4NDU8@976|Bacteroidetes,47K6G@768503|Cytophagia	976|Bacteroidetes	P	PFAM TonB-dependent Receptor Plug	-	-	-	-	-	-	-	-	-	-	-	-	CarbopepD_reg_2,Plug,TonB_dep_Rec
BYD3_k127_297764_3	1121859.KB890739_gene2790	1.3e-43	165.0	COG0662@1|root,COG1396@1|root,COG0662@2|Bacteria,COG1396@2|Bacteria,4NN23@976|Bacteroidetes,47Q97@768503|Cytophagia	976|Bacteroidetes	K	Helix-turn-helix XRE-family like proteins	-	-	-	-	-	-	-	-	-	-	-	-	Cupin_2,HTH_19,HTH_3
BYD3_k127_297764_1	1121904.ARBP01000002_gene6790	3.166e-78	270.0	COG1387@1|root,COG1387@2|Bacteria,4NIJU@976|Bacteroidetes,47Q20@768503|Cytophagia	976|Bacteroidetes	E	PHP domain	-	-	3.1.3.15	ko:K04486	ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230	M00026	R03013	RC00017	ko00000,ko00001,ko00002,ko01000	-	-	-	PHP
BYD3_k127_297764_0	468059.AUHA01000002_gene384	6.596e-128	422.0	2C31A@1|root,2Z7UP@2|Bacteria,4NECU@976|Bacteroidetes,1IQU7@117747|Sphingobacteriia	976|Bacteroidetes	S	Psort location CytoplasmicMembrane, score 10.00	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_297764_5	1121904.ARBP01000005_gene4781	1.098e-11	72.0	2E9CR@1|root,333KC@2|Bacteria,4NWPT@976|Bacteroidetes,47SKK@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_297764_2	471854.Dfer_3095	1.06e-45	172.0	COG0546@1|root,COG0546@2|Bacteria,4NMEX@976|Bacteroidetes,47XK8@768503|Cytophagia	976|Bacteroidetes	S	HAD-hyrolase-like	-	-	-	-	-	-	-	-	-	-	-	-	HAD_2
BYD3_k127_3021115_34	1185876.BN8_06110	0.0004185	44.0	COG3509@1|root,COG3509@2|Bacteria,4NHFS@976|Bacteroidetes,47JDJ@768503|Cytophagia	976|Bacteroidetes	Q	Phospholipase/Carboxylesterase	-	-	-	ko:K03932	-	-	-	-	ko00000	-	CE1	-	Abhydrolase_2,Esterase_phd
BYD3_k127_3021115_25	1250232.JQNJ01000001_gene472	1.315e-36	141.0	COG0561@1|root,COG0561@2|Bacteria,4PKHD@976|Bacteroidetes,1IJ90@117743|Flavobacteriia	976|Bacteroidetes	S	SusD family	-	-	-	ko:K21572	-	-	-	-	ko00000,ko02000	8.A.46.1,8.A.46.3	-	-	SusD-like_3,SusD_RagB
BYD3_k127_3021115_2	1123057.P872_02175	6.19e-264	820.0	COG0823@1|root,COG0823@2|Bacteria,4NG4S@976|Bacteroidetes,47KMG@768503|Cytophagia	976|Bacteroidetes	U	WD40-like Beta Propeller Repeat	-	-	-	-	-	-	-	-	-	-	-	-	PD40
BYD3_k127_3021115_29	1122931.AUAE01000016_gene2723	1.019e-17	86.0	COG0642@1|root,COG0745@1|root,COG3292@1|root,COG0745@2|Bacteria,COG2205@2|Bacteria,COG3292@2|Bacteria,4NDXU@976|Bacteroidetes,2FM2N@200643|Bacteroidia,22W84@171551|Porphyromonadaceae	976|Bacteroidetes	T	histidine kinase DNA gyrase B	-	-	-	-	-	-	-	-	-	-	-	-	HATPase_c,HTH_18,HisKA,Reg_prop,Response_reg,Y_Y_Y
BYD3_k127_3021115_33	1203611.KB894541_gene1568	1.979e-06	49.0	COG0745@1|root,COG2207@1|root,COG3292@1|root,COG5002@1|root,COG0745@2|Bacteria,COG2207@2|Bacteria,COG3292@2|Bacteria,COG5002@2|Bacteria,4P0IA@976|Bacteroidetes,2FWSR@200643|Bacteroidia	976|Bacteroidetes	T	ATPase histidine kinase DNA gyrase B HSP90 domain protein	-	-	-	-	-	-	-	-	-	-	-	-	HATPase_c,HTH_18,HisKA,Reg_prop,Response_reg,Y_Y_Y
BYD3_k127_3021115_1	452637.Oter_4535	2.867e-285	902.0	COG3525@1|root,COG4733@1|root,COG3525@2|Bacteria,COG4733@2|Bacteria,46UX5@74201|Verrucomicrobia,3K8TM@414999|Opitutae	414999|Opitutae	G	Glycosyl hydrolase, family 20, catalytic domain	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_3021115_11	700598.Niako_0254	5.453e-107	360.0	COG3503@1|root,COG3503@2|Bacteria,4NFAF@976|Bacteroidetes,1IVK9@117747|Sphingobacteriia	976|Bacteroidetes	S	Protein of unknown function (DUF1624)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1624
BYD3_k127_3021115_31	765698.Mesci_3762	8.709e-15	81.0	2BK89@1|root,32EN9@2|Bacteria,1RM63@1224|Proteobacteria,2UBED@28211|Alphaproteobacteria,43QDR@69277|Phyllobacteriaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	DUF1772
BYD3_k127_3021115_5	1089547.KB913013_gene414	1.188e-179	569.0	COG0673@1|root,COG0673@2|Bacteria,4NIH0@976|Bacteroidetes,47JXQ@768503|Cytophagia	976|Bacteroidetes	S	Oxidoreductase family, C-terminal alpha/beta domain	-	-	-	-	-	-	-	-	-	-	-	-	GFO_IDH_MocA,GFO_IDH_MocA_C
BYD3_k127_3021115_16	1270193.JARP01000001_gene2420	3.092e-89	306.0	COG4714@1|root,COG4714@2|Bacteria,4NEVY@976|Bacteroidetes,1I1US@117743|Flavobacteriia,2NV7U@237|Flavobacterium	976|Bacteroidetes	S	Protein of unknown function (DUF2167)	-	-	-	-	-	-	-	-	-	-	-	-	DUF2167
BYD3_k127_3021115_0	1279009.ADICEAN_02289	7.299e-309	951.0	COG0488@1|root,COG0488@2|Bacteria,4NG1W@976|Bacteroidetes,47JG7@768503|Cytophagia	976|Bacteroidetes	S	COGs COG0488 ATPase components of ABC transporter with duplicated ATPase domains	-	-	-	ko:K06158	-	-	-	-	ko00000,ko03012	-	-	-	ABC_tran,ABC_tran_Xtn
BYD3_k127_3021115_22	1250232.JQNJ01000001_gene3874	7.276e-50	183.0	COG0664@1|root,COG0664@2|Bacteria,4NNIX@976|Bacteroidetes,1I247@117743|Flavobacteriia	976|Bacteroidetes	T	CRP FNR family transcriptional regulator	-	-	-	-	-	-	-	-	-	-	-	-	cNMP_binding
BYD3_k127_3021115_23	313603.FB2170_14273	6.012e-44	167.0	COG2318@1|root,COG2318@2|Bacteria,4NP2C@976|Bacteroidetes,1I23S@117743|Flavobacteriia	976|Bacteroidetes	S	DinB superfamily	-	-	-	-	-	-	-	-	-	-	-	-	DinB_2
BYD3_k127_3021115_26	1246484.D479_13128	9.051e-36	138.0	COG0202@1|root,COG0202@2|Bacteria,1VD02@1239|Firmicutes,4HKNS@91061|Bacilli	91061|Bacilli	K	COG0202 DNA-directed RNA polymerase, alpha subunit 40 kD subunit	-	-	-	-	-	-	-	-	-	-	-	-	RNA_pol_A_CTD
BYD3_k127_3021115_21	1123248.KB893359_gene2183	3.799e-67	234.0	COG3201@1|root,COG3201@2|Bacteria,4NFJI@976|Bacteroidetes,1ISA7@117747|Sphingobacteriia	976|Bacteroidetes	H	TIGRFAM Nicotinamide mononucleotide transporter PnuC	pnuC	-	-	ko:K03811	-	-	-	-	ko00000,ko02000	4.B.1.1	-	-	NMN_transporter
BYD3_k127_3021115_13	1406840.Q763_10770	2.024e-98	333.0	COG1960@1|root,COG1960@2|Bacteria,4NJ9S@976|Bacteroidetes,1HZRP@117743|Flavobacteriia	976|Bacteroidetes	I	COG1960 Acyl-CoA	-	-	1.14.13.235	ko:K22027	-	-	-	-	ko00000,ko01000	-	-	-	Acyl-CoA_dh_2,Acyl-CoA_dh_N
BYD3_k127_3021115_7	700598.Niako_7207	1.447e-154	493.0	COG4977@1|root,COG4977@2|Bacteria,4NGSR@976|Bacteroidetes,1IP57@117747|Sphingobacteriia	976|Bacteroidetes	K	Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain	-	-	-	-	-	-	-	-	-	-	-	-	DJ-1_PfpI,HTH_18
BYD3_k127_3021115_30	714943.Mucpa_6548	7.078e-15	77.0	COG0500@1|root,COG0500@2|Bacteria,4NVGC@976|Bacteroidetes,1IU64@117747|Sphingobacteriia	976|Bacteroidetes	Q	methyltransferase	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_3021115_8	1237149.C900_05572	8.707e-147	473.0	COG2114@1|root,COG2114@2|Bacteria,4NG5A@976|Bacteroidetes,47QPA@768503|Cytophagia	976|Bacteroidetes	T	Adenylate and Guanylate cyclase catalytic domain	-	-	4.6.1.1	ko:K01768	ko00230,ko02025,ko04113,ko04213,map00230,map02025,map04113,map04213	M00695	R00089,R00434	RC00295	ko00000,ko00001,ko00002,ko01000	-	-	-	Guanylate_cyc
BYD3_k127_3021115_28	1121904.ARBP01000001_gene5402	7.593e-21	96.0	COG4948@1|root,COG4948@2|Bacteria	2|Bacteria	M	carboxylic acid catabolic process	-	-	-	-	-	-	-	-	-	-	-	-	MR_MLE_C,MR_MLE_N
BYD3_k127_3021115_27	1123057.P872_23590	2.062e-33	132.0	COG2005@1|root,COG2005@2|Bacteria,4NUSR@976|Bacteroidetes,47RBD@768503|Cytophagia	976|Bacteroidetes	S	Bacterial regulatory helix-turn-helix protein, lysR family	-	-	-	ko:K02019	-	-	-	-	ko00000,ko03000	-	-	-	HTH_1
BYD3_k127_3021115_18	1121887.AUDK01000009_gene1276	1.721e-83	282.0	COG4149@1|root,COG4149@2|Bacteria,4NIXK@976|Bacteroidetes,1I0Y9@117743|Flavobacteriia,2NTMU@237|Flavobacterium	976|Bacteroidetes	U	Pfam Binding-protein-dependent transport system inner membrane component	modB	-	-	ko:K02018	ko02010,map02010	M00189	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.8	-	-	BPD_transp_1
BYD3_k127_3021115_20	616991.JPOO01000001_gene3487	1.941e-77	267.0	COG3842@1|root,COG3842@2|Bacteria,4NEZ6@976|Bacteroidetes,1HZDP@117743|Flavobacteriia,23HVK@178469|Arenibacter	976|Bacteroidetes	E	ATPases associated with a variety of cellular activities	potA	-	3.6.3.29,3.6.3.30,3.6.3.31	ko:K02010,ko:K02017,ko:K10112,ko:K11072,ko:K11076	ko02010,map02010	M00189,M00190,M00194,M00196,M00197,M00200,M00201,M00206,M00207,M00299,M00300,M00491,M00602,M00605,M00606	-	-	ko00000,ko00001,ko00002,ko01000,ko02000	3.A.1.1,3.A.1.10,3.A.1.11.1,3.A.1.11.2,3.A.1.8	-	-	ABC_tran,TOBE_2
BYD3_k127_3021115_32	411154.GFO_0023	1.138e-07	66.0	COG1361@1|root,COG3266@1|root,COG4932@1|root,COG1361@2|Bacteria,COG3266@2|Bacteria,COG4932@2|Bacteria,4NMB8@976|Bacteroidetes,1HZAG@117743|Flavobacteriia	976|Bacteroidetes	M	C-terminal domain of CHU protein family	-	-	-	-	-	-	-	-	-	-	-	-	CHU_C,DUF11
BYD3_k127_3021115_14	269798.CHU_2852	1.018e-95	352.0	COG3405@1|root,COG5295@1|root,COG3405@2|Bacteria,COG5295@2|Bacteria,4NF6Q@976|Bacteroidetes,47KN7@768503|Cytophagia	976|Bacteroidetes	GUW	candidate b-glycosidase, glycoside hydrolase family 8 protein	-	-	-	-	-	-	-	-	-	-	-	-	Beta_helix,Big_3_3,M60-like_N,NosD,Peptidase_M60
BYD3_k127_3021115_17	251229.Chro_0789	1.513e-87	327.0	COG3420@1|root,COG3420@2|Bacteria,1GPUW@1117|Cyanobacteria,3VJI4@52604|Pleurocapsales	1117|Cyanobacteria	P	Right handed beta helix region	-	-	-	-	-	-	-	-	-	-	-	-	Beta_helix
BYD3_k127_3021115_24	1237149.C900_05457	1.912e-41	159.0	2CD9I@1|root,32WZN@2|Bacteria,4NSXQ@976|Bacteroidetes,47R4I@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_3021115_15	1237149.C900_05456	1.865e-94	313.0	28N54@1|root,2ZBAD@2|Bacteria,4NM2U@976|Bacteroidetes,47JA1@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_3021115_10	1237149.C900_05455	5.896e-111	364.0	28Y2X@1|root,2ZJYG@2|Bacteria,4NN0R@976|Bacteroidetes,47PI8@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_3021115_3	1237149.C900_05454	3.166e-239	764.0	COG4886@1|root,COG4886@2|Bacteria,4NKMV@976|Bacteroidetes,47XBF@768503|Cytophagia	976|Bacteroidetes	S	Leucine-rich repeat (LRR) protein	-	-	-	ko:K13730	ko05100,map05100	-	-	-	ko00000,ko00001	-	-	-	COR,LRR_4,Roc,TIR_2
BYD3_k127_3021115_9	1237149.C900_00350	1.574e-113	382.0	COG2885@1|root,COG2885@2|Bacteria,4PIU2@976|Bacteroidetes,47SAQ@768503|Cytophagia	976|Bacteroidetes	M	Pfam:DUF3308	-	-	-	-	-	-	-	-	-	-	-	-	PorP_SprF
BYD3_k127_3021115_6	926549.KI421517_gene2617	8.374e-157	507.0	COG0438@1|root,COG0438@2|Bacteria,4NGU7@976|Bacteroidetes,47P3E@768503|Cytophagia	976|Bacteroidetes	M	Glycosyl transferases group 1	-	-	-	ko:K03208	-	-	-	-	ko00000	-	GT4	-	Glyco_trans_1_4,Glyco_trans_4_4,Glyco_transf_4,Glycos_transf_1
BYD3_k127_3021115_19	1123057.P872_11480	3.456e-81	278.0	COG1596@1|root,COG1596@2|Bacteria,4NNJT@976|Bacteroidetes,47PCB@768503|Cytophagia	976|Bacteroidetes	M	Polysaccharide biosynthesis/export protein	-	-	-	ko:K01991	ko02026,map02026	-	-	-	ko00000,ko00001,ko02000	1.B.18	-	-	Poly_export,SLBB
BYD3_k127_3021115_4	1124780.ANNU01000038_gene172	1.883e-238	760.0	COG0489@1|root,COG3206@1|root,COG0489@2|Bacteria,COG3206@2|Bacteria,4NEXU@976|Bacteroidetes,47JQC@768503|Cytophagia	976|Bacteroidetes	DM	TIGRFAM capsular exopolysaccharide family	-	-	-	-	-	-	-	-	-	-	-	-	AAA_31,CbiA,GNVR,Wzz
BYD3_k127_3021115_12	1150600.ADIARSV_3998	6.11e-102	342.0	COG2244@1|root,COG2244@2|Bacteria,4PK42@976|Bacteroidetes,1IX4X@117747|Sphingobacteriia	976|Bacteroidetes	S	polysaccharide biosynthetic process	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_3064514_24	926549.KI421517_gene3206	4.969e-162	514.0	COG4948@1|root,COG4948@2|Bacteria,4NEPP@976|Bacteroidetes,47M8J@768503|Cytophagia	976|Bacteroidetes	M	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain	-	-	-	-	-	-	-	-	-	-	-	-	MR_MLE_C,MR_MLE_N
BYD3_k127_3064514_79	1121904.ARBP01000012_gene1264	1.461e-36	143.0	COG0517@1|root,COG0517@2|Bacteria,4NNFS@976|Bacteroidetes	976|Bacteroidetes	S	CBS domain	-	-	-	-	-	-	-	-	-	-	-	-	CBS
BYD3_k127_3064514_80	1279009.ADICEAN_03797	1.019e-34	138.0	COG0517@1|root,COG0517@2|Bacteria,4NNFS@976|Bacteroidetes	976|Bacteroidetes	S	CBS domain	-	-	-	-	-	-	-	-	-	-	-	-	CBS
BYD3_k127_3064514_62	411154.GFO_0037	3.035e-64	233.0	COG2114@1|root,COG2114@2|Bacteria,4NG5A@976|Bacteroidetes,1HYY0@117743|Flavobacteriia	976|Bacteroidetes	T	Adenylate and Guanylate cyclase catalytic domain	-	-	4.6.1.1	ko:K01768	ko00230,ko02025,ko04113,ko04213,map00230,map02025,map04113,map04213	M00695	R00089,R00434	RC00295	ko00000,ko00001,ko00002,ko01000	-	-	-	Guanylate_cyc
BYD3_k127_3064514_85	382464.ABSI01000005_gene1272	4.451e-27	120.0	COG2318@1|root,COG2318@2|Bacteria,46WMK@74201|Verrucomicrobia	74201|Verrucomicrobia	S	DinB superfamily	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_3064514_98	1358423.N180_06695	1.263e-08	64.0	2E6GS@1|root,3313Z@2|Bacteria,4P87X@976|Bacteroidetes,1IZMD@117747|Sphingobacteriia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_3064514_86	1123248.KB893348_gene190	5.227e-27	119.0	COG2353@1|root,COG2353@2|Bacteria,4NSJH@976|Bacteroidetes	976|Bacteroidetes	S	Belongs to the UPF0312 family	-	-	-	-	-	-	-	-	-	-	-	-	YceI
BYD3_k127_3064514_93	935840.JAEQ01000002_gene3277	5.276e-15	80.0	2E5IZ@1|root,330AA@2|Bacteria,1N9JX@1224|Proteobacteria,2UVN3@28211|Alphaproteobacteria,43QQP@69277|Phyllobacteriaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_3064514_34	1121373.KB903643_gene3578	1.426e-136	439.0	COG3865@1|root,COG3865@2|Bacteria,4NE70@976|Bacteroidetes,47PVI@768503|Cytophagia	976|Bacteroidetes	S	3-demethylubiquinone-9 3-methyltransferase	-	-	-	-	-	-	-	-	-	-	-	-	3-dmu-9_3-mt
BYD3_k127_3064514_53	1121373.KB903643_gene3577	6.653e-86	291.0	COG2207@1|root,COG2207@2|Bacteria,4NHYH@976|Bacteroidetes,47PS3@768503|Cytophagia	976|Bacteroidetes	K	helix_turn_helix, arabinose operon control protein	-	-	-	-	-	-	-	-	-	-	-	-	HTH_18
BYD3_k127_3064514_40	700598.Niako_7343	8.932e-121	394.0	COG0583@1|root,COG0583@2|Bacteria,4NGZ5@976|Bacteroidetes,1INST@117747|Sphingobacteriia	976|Bacteroidetes	K	transcriptional regulator	oxyR	-	-	ko:K04761	ko02026,map02026	-	-	-	ko00000,ko00001,ko03000	-	-	-	HTH_1,LysR_substrate
BYD3_k127_3064514_2	1185876.BN8_01381	0.0	1273.0	COG0376@1|root,COG0376@2|Bacteria,4NG30@976|Bacteroidetes,47KR2@768503|Cytophagia	976|Bacteroidetes	P	Bifunctional enzyme with both catalase and broad- spectrum peroxidase activity	katG	-	1.11.1.21	ko:K03782	ko00360,ko00380,ko00940,ko00983,ko01100,ko01110,map00360,map00380,map00940,map00983,map01100,map01110	-	R00602,R00698,R02596,R02670,R03919,R04007,R07443,R11906	RC00034,RC00213,RC00767,RC02141	ko00000,ko00001,ko01000	-	-	-	peroxidase
BYD3_k127_3064514_101	888059.HMPREF9071_0575	5.068e-05	54.0	COG3209@1|root,COG3209@2|Bacteria,4PEJ3@976|Bacteroidetes,1IF4S@117743|Flavobacteriia,1ESAT@1016|Capnocytophaga	976|Bacteroidetes	M	COG3209 Rhs family protein	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_3064514_63	760192.Halhy_5322	9.836e-63	224.0	COG4106@1|root,COG4106@2|Bacteria,4NN4V@976|Bacteroidetes	976|Bacteroidetes	S	Methyltransferase domain	-	-	-	-	-	-	-	-	-	-	-	-	Methyltransf_25
BYD3_k127_3064514_89	1267535.KB906767_gene4385	1.553e-23	104.0	2CK96@1|root,3346F@2|Bacteria,3Y5N2@57723|Acidobacteria,2JJZD@204432|Acidobacteriia	204432|Acidobacteriia	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_3064514_65	1120966.AUBU01000006_gene3431	1.568e-59	214.0	28HQQ@1|root,2Z7YB@2|Bacteria,4NJCY@976|Bacteroidetes,47QT8@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_3064514_52	1288963.ADIS_2849	3.167e-90	310.0	COG2133@1|root,COG2133@2|Bacteria,4PMM3@976|Bacteroidetes,47NGM@768503|Cytophagia	976|Bacteroidetes	G	Methane oxygenase PmoA	-	-	-	-	-	-	-	-	-	-	-	-	PmoA
BYD3_k127_3064514_0	153721.MYP_3027	0.0	1742.0	COG1201@1|root,COG1201@2|Bacteria,4NGQ0@976|Bacteroidetes,47NAU@768503|Cytophagia	976|Bacteroidetes	L	DEAD DEAH box helicase	lhr	-	-	ko:K03724	-	-	-	-	ko00000,ko01000,ko03400	-	-	-	DEAD,DEAD_assoc,Helicase_C
BYD3_k127_3064514_57	1121930.AQXG01000017_gene3159	7.506e-70	249.0	COG0726@1|root,COG0726@2|Bacteria,4NKYS@976|Bacteroidetes	976|Bacteroidetes	G	PFAM Polysaccharide deacetylase	pgdA	-	-	-	-	-	-	-	-	-	-	-	Polysacc_deac_1
BYD3_k127_3064514_31	1185876.BN8_03448	3.217e-145	469.0	COG2114@1|root,COG2114@2|Bacteria,4NG5A@976|Bacteroidetes,47QPA@768503|Cytophagia	976|Bacteroidetes	T	Adenylate and Guanylate cyclase catalytic domain	-	-	4.6.1.1	ko:K01768	ko00230,ko02025,ko04113,ko04213,map00230,map02025,map04113,map04213	M00695	R00089,R00434	RC00295	ko00000,ko00001,ko00002,ko01000	-	-	-	Guanylate_cyc
BYD3_k127_3064514_25	929703.KE386491_gene1532	2.279e-160	511.0	COG1028@1|root,COG1028@2|Bacteria,4NHSE@976|Bacteroidetes,47N8M@768503|Cytophagia	976|Bacteroidetes	IQ	Enoyl-(Acyl carrier protein) reductase	-	-	-	-	-	-	-	-	-	-	-	-	adh_short
BYD3_k127_3064514_38	700598.Niako_4265	1.232e-123	401.0	COG2207@1|root,COG2207@2|Bacteria,4NGWC@976|Bacteroidetes,1IR95@117747|Sphingobacteriia	976|Bacteroidetes	K	SMART helix-turn-helix- domain containing protein AraC type	-	-	-	-	-	-	-	-	-	-	-	-	HTH_18
BYD3_k127_3064514_41	509635.N824_20015	1.171e-118	407.0	COG4886@1|root,COG4886@2|Bacteria,4NG07@976|Bacteroidetes,1IPTR@117747|Sphingobacteriia	976|Bacteroidetes	S	Planctomycete cytochrome C	-	-	-	-	-	-	-	-	-	-	-	-	CHB_HEX_C_1,Fn3_assoc,PSCyt1
BYD3_k127_3064514_11	1288963.ADIS_1215	5.249e-233	728.0	COG4102@1|root,COG4102@2|Bacteria,4NE73@976|Bacteroidetes,47KYW@768503|Cytophagia	976|Bacteroidetes	S	Protein of unknown function (DUF1501)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1501
BYD3_k127_3064514_6	1286632.P278_22600	3.005e-283	889.0	COG2010@1|root,COG2010@2|Bacteria,4NEPV@976|Bacteroidetes,1HWYF@117743|Flavobacteriia	976|Bacteroidetes	C	Protein of unknown function (DUF1549)	-	-	-	-	-	-	-	-	-	-	-	-	Laminin_G_3,PSCyt1,PSCyt2,PSD1
BYD3_k127_3064514_60	616991.JPOO01000003_gene52	6.483e-68	256.0	COG3458@1|root,COG3458@2|Bacteria,4NJMX@976|Bacteroidetes,1IFA0@117743|Flavobacteriia,23HR9@178469|Arenibacter	976|Bacteroidetes	Q	Acetyl xylan esterase (AXE1)	-	-	-	-	-	-	-	-	-	-	-	-	AXE1
BYD3_k127_3064514_17	1123057.P872_07745	5.123e-190	602.0	COG1305@1|root,COG1305@2|Bacteria,4NKII@976|Bacteroidetes,47KZ3@768503|Cytophagia	976|Bacteroidetes	E	Transglutaminase-like superfamily	-	-	-	-	-	-	-	-	-	-	-	-	Transglut_core
BYD3_k127_3064514_88	926560.KE387025_gene4075	3.095e-25	111.0	2B5RU@1|root,31YMF@2|Bacteria	2|Bacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	Hemerythrin
BYD3_k127_3064514_16	926549.KI421517_gene1608	1.384e-191	605.0	COG0657@1|root,COG0657@2|Bacteria,4NKWE@976|Bacteroidetes,47UDA@768503|Cytophagia	976|Bacteroidetes	G	alpha/beta hydrolase fold	-	-	-	-	-	-	-	-	-	-	-	-	Abhydrolase_3
BYD3_k127_3064514_61	760192.Halhy_4294	6.624e-67	234.0	COG0666@1|root,COG0666@2|Bacteria,4P2SK@976|Bacteroidetes	976|Bacteroidetes	S	Ankyrin repeat	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_3064514_87	926562.Oweho_3353	5.344e-27	113.0	COG3070@1|root,COG3070@2|Bacteria,4NSGZ@976|Bacteroidetes,1I4CE@117743|Flavobacteriia,2PC3K@246874|Cryomorphaceae	976|Bacteroidetes	K	TfoX N-terminal domain	-	-	-	-	-	-	-	-	-	-	-	-	TfoX_N
BYD3_k127_3064514_95	305900.GV64_10025	7.295e-12	71.0	COG3832@1|root,COG3832@2|Bacteria,1QYM8@1224|Proteobacteria	1224|Proteobacteria	S	Polyketide cyclase / dehydrase and lipid transport	-	-	-	-	-	-	-	-	-	-	-	-	Polyketide_cyc2
BYD3_k127_3064514_75	1453505.JASY01000005_gene1503	9.155e-40	151.0	COG1733@1|root,COG1733@2|Bacteria,4NSVE@976|Bacteroidetes,1I4YH@117743|Flavobacteriia,2NWXC@237|Flavobacterium	976|Bacteroidetes	K	Transcriptional regulator	-	-	-	-	-	-	-	-	-	-	-	-	HxlR
BYD3_k127_3064514_67	1121896.JMLU01000024_gene2558	3.205e-58	212.0	COG0730@1|root,COG0730@2|Bacteria,4NFWP@976|Bacteroidetes,1HWSW@117743|Flavobacteriia,2NSXA@237|Flavobacterium	976|Bacteroidetes	S	membrane transporter protein	-	-	-	ko:K07090	-	-	-	-	ko00000	-	-	-	TauE
BYD3_k127_3064514_55	1250232.JQNJ01000001_gene2672	4.021e-83	282.0	COG1416@1|root,COG1416@2|Bacteria,4NH85@976|Bacteroidetes	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_3064514_35	1237149.C900_02163	2.427e-131	429.0	2C2F5@1|root,32WND@2|Bacteria,4NNJR@976|Bacteroidetes	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_3064514_43	1237149.C900_02164	8.044e-116	376.0	COG1136@1|root,COG1136@2|Bacteria,4NE5N@976|Bacteroidetes,47PZY@768503|Cytophagia	976|Bacteroidetes	V	ATPases associated with a variety of cellular activities	-	-	-	ko:K02003	-	M00258	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	ABC_tran
BYD3_k127_3064514_36	1237149.C900_02165	1.163e-127	419.0	COG4591@1|root,COG4591@2|Bacteria,4NHBR@976|Bacteroidetes	976|Bacteroidetes	M	ABC-type transport system involved in lipoprotein release permease component	-	-	-	-	-	-	-	-	-	-	-	-	FtsX,MacB_PCD
BYD3_k127_3064514_21	468059.AUHA01000007_gene2661	9.508e-172	547.0	COG4591@1|root,COG4591@2|Bacteria,4NGJ3@976|Bacteroidetes,1IVEI@117747|Sphingobacteriia	976|Bacteroidetes	M	MacB-like periplasmic core domain	-	-	-	-	-	-	-	-	-	-	-	-	FtsX,MacB_PCD
BYD3_k127_3064514_45	1123248.KB893316_gene4665	1.481e-110	364.0	COG2834@1|root,COG2834@2|Bacteria,4NIT5@976|Bacteroidetes,1IWMK@117747|Sphingobacteriia	976|Bacteroidetes	M	Outer membrane lipoprotein-sorting protein	-	-	-	-	-	-	-	-	-	-	-	-	LolA_like
BYD3_k127_3064514_12	1120968.AUBX01000010_gene919	8.333e-233	745.0	COG0577@1|root,COG0577@2|Bacteria,4NDUK@976|Bacteroidetes,47JJN@768503|Cytophagia	976|Bacteroidetes	V	FtsX-like permease family	-	-	-	ko:K02004	-	M00258	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	FtsX,MacB_PCD
BYD3_k127_3064514_81	1250232.JQNJ01000001_gene1409	9.003e-34	145.0	2FJ84@1|root,34AY5@2|Bacteria,4P6PW@976|Bacteroidetes,1IA6I@117743|Flavobacteriia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_3064514_28	761193.Runsl_4708	1.027e-153	496.0	2CD20@1|root,2ZA3P@2|Bacteria,4NHWK@976|Bacteroidetes,47N3B@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_3064514_74	189753.AXAS01000043_gene5038	7.562e-43	161.0	COG2764@1|root,COG2764@2|Bacteria,1RF5T@1224|Proteobacteria,2U922@28211|Alphaproteobacteria,3JY6M@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily	-	-	-	ko:K04750	-	-	-	-	ko00000	-	-	-	Glyoxalase
BYD3_k127_3064514_56	1237149.C900_05029	9.671e-82	278.0	COG2114@1|root,COG2114@2|Bacteria,4NR9E@976|Bacteroidetes,47V42@768503|Cytophagia	976|Bacteroidetes	T	Adenylyl- / guanylyl cyclase, catalytic domain	-	-	-	-	-	-	-	-	-	-	-	-	Fer2,Guanylate_cyc
BYD3_k127_3064514_5	504472.Slin_3637	1.4e-322	1011.0	COG0577@1|root,COG0577@2|Bacteria,4P1B0@976|Bacteroidetes,47U89@768503|Cytophagia	976|Bacteroidetes	V	MacB-like periplasmic core domain	-	-	-	-	-	-	-	-	-	-	-	-	MacB_PCD
BYD3_k127_3064514_76	504472.Slin_0945	1.047e-38	147.0	COG1695@1|root,COG1695@2|Bacteria,4NS5H@976|Bacteroidetes,47QMA@768503|Cytophagia	976|Bacteroidetes	K	Transcriptional regulator PadR-like family	-	-	-	-	-	-	-	-	-	-	-	-	PadR
BYD3_k127_3064514_66	746697.Aeqsu_0432	6.419e-59	212.0	COG3279@1|root,COG3279@2|Bacteria,4NIJQ@976|Bacteroidetes,1IIN1@117743|Flavobacteriia	976|Bacteroidetes	KT	cheY-homologous receiver domain	-	-	-	-	-	-	-	-	-	-	-	-	LytTR,Response_reg
BYD3_k127_3064514_32	760192.Halhy_0059	1.876e-144	465.0	COG2972@1|root,COG2972@2|Bacteria,4NRI4@976|Bacteroidetes,1IV8I@117747|Sphingobacteriia	976|Bacteroidetes	T	Histidine kinase	-	-	-	-	-	-	-	-	-	-	-	-	His_kinase
BYD3_k127_3064514_15	760192.Halhy_0058	1.64e-192	611.0	COG0671@1|root,COG0671@2|Bacteria,4NIUA@976|Bacteroidetes,1IUZC@117747|Sphingobacteriia	976|Bacteroidetes	I	PAP2 superfamily	-	-	-	-	-	-	-	-	-	-	-	-	PAP2
BYD3_k127_3064514_91	1237149.C900_03262	3.467e-18	93.0	COG3468@1|root,COG3468@2|Bacteria,4NEVR@976|Bacteroidetes	976|Bacteroidetes	MU	outer membrane autotransporter barrel domain protein	-	-	-	-	-	-	-	-	-	-	-	-	OMP_b-brl_2
BYD3_k127_3064514_9	1121904.ARBP01000017_gene5109	5.247e-252	785.0	COG5476@1|root,COG5476@2|Bacteria,4NG23@976|Bacteroidetes,47NWD@768503|Cytophagia	976|Bacteroidetes	S	MlrC C-terminus	-	-	-	-	-	-	-	-	-	-	-	-	DUF1485,MlrC_C
BYD3_k127_3064514_10	388413.ALPR1_17058	1.711e-247	771.0	COG4948@1|root,COG4948@2|Bacteria,4NE9A@976|Bacteroidetes,47NDY@768503|Cytophagia	976|Bacteroidetes	M	Mandelate racemase / muconate lactonizing enzyme, N-terminal domain	-	-	-	-	-	-	-	-	-	-	-	-	MR_MLE_C,MR_MLE_N
BYD3_k127_3064514_71	1123248.KB893359_gene2202	1.619e-54	196.0	29EPR@1|root,301MK@2|Bacteria,4NQPA@976|Bacteroidetes	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_3064514_54	1144275.COCOR_02829	3.716e-84	287.0	COG3315@1|root,COG3315@2|Bacteria	2|Bacteria	Q	Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity	yktD	GO:0002682,GO:0002684,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0008150,GO:0009605,GO:0009607,GO:0016020,GO:0030312,GO:0035821,GO:0043207,GO:0044003,GO:0044403,GO:0044419,GO:0044424,GO:0044444,GO:0044464,GO:0048518,GO:0048583,GO:0048584,GO:0050776,GO:0050778,GO:0050789,GO:0050896,GO:0051701,GO:0051704,GO:0051707,GO:0051817,GO:0052031,GO:0052173,GO:0052200,GO:0052255,GO:0052552,GO:0052553,GO:0052555,GO:0052556,GO:0052564,GO:0052572,GO:0065007,GO:0071944,GO:0075136	-	ko:K16038	ko01051,ko01052,ko01130,map01051,map01052,map01130	-	R09856	RC00003,RC02842	ko00000,ko00001,ko01000	-	-	-	LCM
BYD3_k127_3064514_29	1121481.AUAS01000002_gene3332	1.331e-148	488.0	COG1680@1|root,COG1680@2|Bacteria,4NEEP@976|Bacteroidetes,47KW2@768503|Cytophagia	976|Bacteroidetes	V	Beta-lactamase	-	-	-	-	-	-	-	-	-	-	-	-	Beta-lactamase
BYD3_k127_3064514_96	1121904.ARBP01000004_gene930	1.157e-11	74.0	2FHAT@1|root,34951@2|Bacteria,4P567@976|Bacteroidetes,47VPY@768503|Cytophagia	976|Bacteroidetes	S	Mechanosensitive ion channel	-	-	-	-	-	-	-	-	-	-	-	-	MS_channel
BYD3_k127_3064514_1	1121904.ARBP01000004_gene929	0.0	1308.0	COG0470@1|root,COG0531@1|root,COG0470@2|Bacteria,COG0531@2|Bacteria,4NFFX@976|Bacteroidetes,47KCI@768503|Cytophagia	976|Bacteroidetes	E	Amino acid permease	-	-	-	-	-	-	-	-	-	-	-	-	AA_permease,SLC12
BYD3_k127_3064514_37	1121904.ARBP01000004_gene928	9.148e-127	417.0	COG0025@1|root,COG0025@2|Bacteria,4NK07@976|Bacteroidetes,47NVA@768503|Cytophagia	976|Bacteroidetes	P	PFAM sodium hydrogen exchanger	-	-	-	-	-	-	-	-	-	-	-	-	Na_H_Exchanger
BYD3_k127_3064514_49	1121481.AUAS01000005_gene1989	2.682e-103	346.0	COG3021@1|root,COG3021@2|Bacteria,4NGD4@976|Bacteroidetes,47KVB@768503|Cytophagia	976|Bacteroidetes	S	Endonuclease Exonuclease phosphatase	-	-	-	-	-	-	-	-	-	-	-	-	Exo_endo_phos
BYD3_k127_3064514_58	616991.JPOO01000001_gene3360	3.14e-69	244.0	COG2207@1|root,COG2207@2|Bacteria,4PI6R@976|Bacteroidetes,1IG3A@117743|Flavobacteriia,23IGX@178469|Arenibacter	976|Bacteroidetes	K	helix_turn_helix, arabinose operon control protein	-	-	-	-	-	-	-	-	-	-	-	-	HTH_18
BYD3_k127_3064514_42	1267535.KB906767_gene1337	5.863e-117	387.0	COG1073@1|root,COG1073@2|Bacteria	2|Bacteria	S	thiolester hydrolase activity	ytaP	-	-	-	-	-	-	-	-	-	-	-	AXE1,Abhydrolase_7,DLH,Peptidase_S15,Peptidase_S9
BYD3_k127_3064514_70	1273538.G159_02260	9.327e-55	199.0	COG0604@1|root,COG0604@2|Bacteria,1TSWF@1239|Firmicutes,4HANV@91061|Bacilli,26I9G@186818|Planococcaceae	91061|Bacilli	C	Zinc-binding dehydrogenase	-	-	-	-	-	-	-	-	-	-	-	-	ADH_N,ADH_zinc_N,ADH_zinc_N_2
BYD3_k127_3064514_97	316274.Haur_1504	1.449e-10	66.0	COG0604@1|root,COG0604@2|Bacteria,2G84Q@200795|Chloroflexi	200795|Chloroflexi	C	PFAM Alcohol dehydrogenase zinc-binding domain protein	-	-	-	-	-	-	-	-	-	-	-	-	ADH_N,ADH_zinc_N_2
BYD3_k127_3064514_99	574375.BAGA_18610	5.359e-08	57.0	COG0604@1|root,COG0604@2|Bacteria,1TSWF@1239|Firmicutes,4HANV@91061|Bacilli,1ZPZP@1386|Bacillus	91061|Bacilli	C	Zinc-binding dehydrogenase	-	-	-	-	-	-	-	-	-	-	-	-	ADH_N,ADH_zinc_N,ADH_zinc_N_2
BYD3_k127_3064514_13	886377.Murru_1827	2.572e-209	657.0	COG3508@1|root,COG3508@2|Bacteria,4NEYZ@976|Bacteroidetes,1HYHK@117743|Flavobacteriia	976|Bacteroidetes	Q	homogentisate 12-dioxygenase	hmgA	-	1.13.11.5	ko:K00451	ko00350,ko00643,ko01100,ko01120,map00350,map00643,map01100,map01120	M00044	R02519	RC00737	ko00000,ko00001,ko00002,ko01000	-	-	-	HgmA
BYD3_k127_3064514_19	1120965.AUBV01000007_gene2535	3.191e-188	593.0	COG3185@1|root,COG3185@2|Bacteria,4NFI7@976|Bacteroidetes,47KCH@768503|Cytophagia	976|Bacteroidetes	E	PFAM Glyoxalase bleomycin resistance protein dioxygenase	hppD	-	1.13.11.27	ko:K00457	ko00130,ko00350,ko00360,ko01100,map00130,map00350,map00360,map01100	M00044	R01372,R02521	RC00505,RC00738	ko00000,ko00001,ko00002,ko01000,ko04147	-	-	-	Glyoxalase,Glyoxalase_5
BYD3_k127_3064514_26	1237149.C900_04904	3.042e-159	512.0	COG0179@1|root,COG0179@2|Bacteria,4NGI0@976|Bacteroidetes,47KTT@768503|Cytophagia	976|Bacteroidetes	Q	fumarylacetoacetate (FAA) hydrolase	fahA	-	3.7.1.2	ko:K01555	ko00350,ko00643,ko01100,ko01120,map00350,map00643,map01100,map01120	M00044	R01364	RC00326,RC00446	ko00000,ko00001,ko00002,ko01000,ko04147	-	-	-	FAA_hydrolase,FAA_hydrolase_N
BYD3_k127_3064514_48	1237149.C900_04903	4.642e-104	346.0	COG1853@1|root,COG1853@2|Bacteria,4NF4H@976|Bacteroidetes,47KXZ@768503|Cytophagia	976|Bacteroidetes	S	PFAM Flavin reductase like domain	-	-	-	-	-	-	-	-	-	-	-	-	Flavin_Reduct
BYD3_k127_3064514_18	1094466.KQS_10995	6.286e-190	609.0	COG3186@1|root,COG3186@2|Bacteria,4NEX5@976|Bacteroidetes,1HX7H@117743|Flavobacteriia,2NT3Z@237|Flavobacterium	976|Bacteroidetes	E	Phenylalanine 4-monooxygenase	phhA	-	1.14.16.1	ko:K00500	ko00360,ko00400,ko00790,ko01100,ko01230,map00360,map00400,map00790,map01100,map01230	-	R01795,R07211	RC00490	ko00000,ko00001,ko01000	-	-	-	Biopterin_H
BYD3_k127_3064514_3	1501230.ET33_15710	0.0	1191.0	COG0178@1|root,COG0178@2|Bacteria,1TR1H@1239|Firmicutes,4H9RE@91061|Bacilli,26QI4@186822|Paenibacillaceae	91061|Bacilli	L	ABC transporter	-	-	-	-	-	-	-	-	-	-	-	-	ABC_tran
BYD3_k127_3064514_59	1173028.ANKO01000094_gene2611	6.03e-68	246.0	COG1680@1|root,COG1680@2|Bacteria,1G6GD@1117|Cyanobacteria,1HBFP@1150|Oscillatoriales	1117|Cyanobacteria	V	Beta-lactamase	-	-	3.4.16.4	ko:K01286	-	-	-	-	ko00000,ko01000	-	-	-	Beta-lactamase
BYD3_k127_3064514_4	760192.Halhy_5008	0.0	1095.0	COG1680@1|root,COG3394@1|root,COG1680@2|Bacteria,COG3394@2|Bacteria,4NEVS@976|Bacteroidetes	976|Bacteroidetes	V	COG1680 Beta-lactamase class C and other penicillin binding	-	-	-	-	-	-	-	-	-	-	-	-	Beta-lactamase,YdjC
BYD3_k127_3064514_82	313606.M23134_05928	3.234e-32	126.0	COG0614@1|root,COG0614@2|Bacteria,4NQ88@976|Bacteroidetes,47QDM@768503|Cytophagia	976|Bacteroidetes	P	PD-(D/E)XK nuclease superfamily	-	-	-	-	-	-	-	-	-	-	-	-	PDDEXK_3
BYD3_k127_3064514_100	269798.CHU_0701	7.89e-08	55.0	COG0614@1|root,COG0614@2|Bacteria,4NQ88@976|Bacteroidetes,47QDM@768503|Cytophagia	976|Bacteroidetes	P	PD-(D/E)XK nuclease superfamily	-	-	-	-	-	-	-	-	-	-	-	-	PDDEXK_3
BYD3_k127_3064514_20	929703.KE386491_gene540	1.008e-176	577.0	COG1529@1|root,COG1529@2|Bacteria,4NFFU@976|Bacteroidetes,47N2K@768503|Cytophagia	976|Bacteroidetes	C	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain	-	-	1.3.99.16	ko:K07303	-	-	-	-	ko00000,ko01000	-	-	-	Ald_Xan_dh_C,Ald_Xan_dh_C2
BYD3_k127_3064514_46	1123276.KB893275_gene2320	7.493e-107	362.0	COG0671@1|root,COG0671@2|Bacteria,4NF9W@976|Bacteroidetes,47M2K@768503|Cytophagia	976|Bacteroidetes	I	PFAM Phosphatidic acid phosphatase type 2 haloperoxidase	-	-	-	-	-	-	-	-	-	-	-	-	PAP2
BYD3_k127_3064514_47	700598.Niako_1749	1.186e-106	350.0	COG3828@1|root,COG3828@2|Bacteria,4NRZF@976|Bacteroidetes,1IVGZ@117747|Sphingobacteriia	976|Bacteroidetes	S	Trehalose utilisation	-	-	-	ko:K09992	-	-	-	-	ko00000	-	-	-	ThuA
BYD3_k127_3064514_73	306281.AJLK01000161_gene239	3.458e-47	190.0	COG0457@1|root,COG0457@2|Bacteria	306281.AJLK01000161_gene239|-	S	peptidyl-tyrosine sulfation	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_3064514_90	880070.Cycma_0053	1.733e-23	110.0	COG2207@1|root,COG2207@2|Bacteria,4NHA5@976|Bacteroidetes,47RXM@768503|Cytophagia	976|Bacteroidetes	K	Helix-turn-helix domain	-	-	-	-	-	-	-	-	-	-	-	-	HTH_18
BYD3_k127_3064514_92	1385517.N800_08015	4.206e-18	94.0	2CDA1@1|root,32RXD@2|Bacteria,1N4A5@1224|Proteobacteria,1SC27@1236|Gammaproteobacteria,1X7DZ@135614|Xanthomonadales	135614|Xanthomonadales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_3064514_51	1237149.C900_05696	3.355e-91	326.0	COG1520@1|root,COG1520@2|Bacteria,4NMP7@976|Bacteroidetes	976|Bacteroidetes	S	PQQ-like domain	-	-	-	-	-	-	-	-	-	-	-	-	PQQ_2
BYD3_k127_3064514_30	234267.Acid_5969	2.369e-146	477.0	COG0076@1|root,COG0076@2|Bacteria,3Y365@57723|Acidobacteria	57723|Acidobacteria	E	Pyridoxal-dependent decarboxylase conserved domain	-	-	-	-	-	-	-	-	-	-	-	-	Pyridoxal_deC
BYD3_k127_3064514_102	632245.CLP_2119	0.0005303	44.0	COG0642@1|root,COG3292@1|root,COG2205@2|Bacteria,COG3292@2|Bacteria,1TQMV@1239|Firmicutes,247SE@186801|Clostridia,36ERF@31979|Clostridiaceae	186801|Clostridia	T	Histidine kinase	-	-	-	-	-	-	-	-	-	-	-	-	HATPase_c,HisKA,PAS_4,PAS_9,Reg_prop,Response_reg,Y_Y_Y
BYD3_k127_3064514_68	929556.Solca_0076	8.695e-58	206.0	COG0251@1|root,COG0251@2|Bacteria,4NSCT@976|Bacteroidetes,1IU0X@117747|Sphingobacteriia	976|Bacteroidetes	J	endoribonuclease L-PSP	-	-	-	-	-	-	-	-	-	-	-	-	Ribonuc_L-PSP
BYD3_k127_3064514_33	1121957.ATVL01000009_gene880	3.204e-140	458.0	COG4225@1|root,COG4225@2|Bacteria,4NH7G@976|Bacteroidetes,47N5K@768503|Cytophagia	976|Bacteroidetes	G	Glycosyl Hydrolase Family 88	yteR_9	-	-	-	-	-	-	-	-	-	-	-	Glyco_hydro_88,Lipase_GDSL_2
BYD3_k127_3064514_94	411483.FAEPRAA2165_00112	1.064e-12	78.0	COG1752@1|root,COG1752@2|Bacteria,1UBYN@1239|Firmicutes,247V3@186801|Clostridia,3WJ3G@541000|Ruminococcaceae	186801|Clostridia	S	Psort location Cytoplasmic, score 8.96	-	-	-	ko:K07001	-	-	-	-	ko00000	-	-	-	Patatin
BYD3_k127_3064514_14	929556.Solca_0108	1.271e-196	628.0	COG0457@1|root,COG0457@2|Bacteria,4NFMI@976|Bacteroidetes,1IV5V@117747|Sphingobacteriia	976|Bacteroidetes	S	Tetratricopeptide repeat	-	-	-	-	-	-	-	-	-	-	-	-	TPR_8
BYD3_k127_3064514_7	1304284.L21TH_1164	1.188e-270	840.0	COG0058@1|root,COG0058@2|Bacteria,1TQAJ@1239|Firmicutes,248E1@186801|Clostridia,36E5W@31979|Clostridiaceae	186801|Clostridia	G	Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties	glgP2	-	2.4.1.1	ko:K00688	ko00500,ko01100,ko01110,ko02026,ko04217,ko04910,ko04922,ko04931,map00500,map01100,map01110,map02026,map04217,map04910,map04922,map04931	-	R02111	-	ko00000,ko00001,ko01000	-	GT35	-	DUF3417,Glyco_transf_5,Phosphorylase
BYD3_k127_3064514_78	1122605.KB893643_gene850	8.352e-38	145.0	COG2764@1|root,COG2764@2|Bacteria	2|Bacteria	E	glyoxalase bleomycin resistance protein dioxygenase	-	-	-	ko:K04750	-	-	-	-	ko00000	-	-	-	Glyoxalase
BYD3_k127_3064514_22	468059.AUHA01000003_gene1801	8.047e-167	531.0	COG4850@1|root,COG4850@2|Bacteria,4NFZ6@976|Bacteroidetes,1IT86@117747|Sphingobacteriia	976|Bacteroidetes	S	Uncharacterized conserved protein (DUF2183)	-	-	-	-	-	-	-	-	-	-	-	-	DUF2183
BYD3_k127_3064514_8	468059.AUHA01000006_gene3015	4.404e-252	783.0	COG0534@1|root,COG0534@2|Bacteria,4NDUF@976|Bacteroidetes,1IQJT@117747|Sphingobacteriia	976|Bacteroidetes	V	Mate efflux family protein	-	-	-	ko:K03327	-	-	-	-	ko00000,ko02000	2.A.66.1	-	-	MatE
BYD3_k127_3064514_77	1121924.ATWH01000034_gene203	1.347e-38	149.0	COG4319@1|root,COG4319@2|Bacteria,2II1S@201174|Actinobacteria	201174|Actinobacteria	E	SnoaL-like domain	-	-	-	-	-	-	-	-	-	-	-	-	SnoaL_3
BYD3_k127_3064514_27	760192.Halhy_4416	2.201e-158	511.0	COG2311@1|root,COG2311@2|Bacteria	2|Bacteria	S	Protein of unknown function (DUF418)	-	-	-	ko:K07148	-	-	-	-	ko00000	-	-	-	DUF418
BYD3_k127_3064514_39	1124780.ANNU01000013_gene3786	3.911e-122	421.0	COG0577@1|root,COG0577@2|Bacteria,4NDUK@976|Bacteroidetes,47JJN@768503|Cytophagia	976|Bacteroidetes	V	FtsX-like permease family	-	-	-	-	-	-	-	-	-	-	-	-	FtsX,MacB_PCD
BYD3_k127_3064514_23	1123248.KB893359_gene2216	4.784e-165	549.0	COG1629@1|root,COG1629@2|Bacteria,4P4MW@976|Bacteroidetes,1IRHX@117747|Sphingobacteriia	976|Bacteroidetes	P	Outer membrane protein beta-barrel family	-	-	-	-	-	-	-	-	-	-	-	-	CarbopepD_reg_2,CarboxypepD_reg,OMP_b-brl_3,Plug
BYD3_k127_3064514_44	1296416.JACB01000001_gene3301	1.173e-114	392.0	COG0457@1|root,COG2207@1|root,COG5616@1|root,COG0457@2|Bacteria,COG2207@2|Bacteria,COG5616@2|Bacteria,4NFW7@976|Bacteroidetes,1HZQR@117743|Flavobacteriia	976|Bacteroidetes	K	COGs COG5616 integral membrane protein	-	-	-	-	-	-	-	-	-	-	-	-	ANAPC3,Guanylate_cyc,HTH_18,TPR_8
BYD3_k127_3064514_50	313606.M23134_00717	4.313e-103	351.0	COG1167@1|root,COG1167@2|Bacteria,4NG85@976|Bacteroidetes,47KRC@768503|Cytophagia	976|Bacteroidetes	K	Transcriptional regulator, GntR family with aminotransferase domain	-	-	-	ko:K00375	-	-	-	-	ko00000,ko03000	-	-	-	Aminotran_1_2,GntR
BYD3_k127_3064514_84	929703.KE386491_gene3188	9.001e-31	123.0	COG3813@1|root,COG3813@2|Bacteria,4NTD7@976|Bacteroidetes	976|Bacteroidetes	S	Protein of unknown function (DUF1272)	-	-	-	ko:K09984	-	-	-	-	ko00000	-	-	-	DUF1272
BYD3_k127_3064514_64	376686.Fjoh_3183	3.917e-60	215.0	2D579@1|root,32TID@2|Bacteria,4NNEQ@976|Bacteroidetes,1IIE9@117743|Flavobacteriia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_3064514_83	1089547.KB913013_gene1918	3.49e-32	131.0	COG1595@1|root,COG1595@2|Bacteria,4NETF@976|Bacteroidetes,47QDK@768503|Cytophagia	976|Bacteroidetes	K	Belongs to the sigma-70 factor family. ECF subfamily	sigG	-	-	ko:K03088	-	-	-	-	ko00000,ko03021	-	-	-	Sigma70_r2,Sigma70_r4_2
BYD3_k127_3064514_72	1185876.BN8_00216	2.545e-47	177.0	2FJ50@1|root,34AV7@2|Bacteria,4P5VV@976|Bacteroidetes,47W0N@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_3068975_27	1185876.BN8_00258	1.331e-59	217.0	28I8D@1|root,2Z8B7@2|Bacteria,4NM23@976|Bacteroidetes,47NIB@768503|Cytophagia	976|Bacteroidetes	S	Domain of unknown function (DUF4249)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4249
BYD3_k127_3068975_1	1185876.BN8_00257	0.0	1140.0	COG1629@1|root,COG4771@2|Bacteria,4NF4B@976|Bacteroidetes,47K68@768503|Cytophagia	976|Bacteroidetes	P	PFAM TonB-dependent Receptor Plug	-	-	-	-	-	-	-	-	-	-	-	-	CarbopepD_reg_2,Plug,TonB_dep_Rec
BYD3_k127_3068975_35	1279009.ADICEAN_03404	2.849e-41	161.0	2E4RS@1|root,32ZKA@2|Bacteria,4NVN5@976|Bacteroidetes,47RDU@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_3068975_5	1237149.C900_04994	3.573e-254	792.0	COG1418@1|root,COG1418@2|Bacteria,4NE3V@976|Bacteroidetes,47KJE@768503|Cytophagia	976|Bacteroidetes	S	Endoribonuclease that initiates mRNA decay	rny	-	-	ko:K18682	ko03018,map03018	-	-	-	ko00000,ko00001,ko01000,ko03019	-	-	-	DUF3552,HD,KH_1
BYD3_k127_3068975_37	1237149.C900_04992	3.598e-35	136.0	COG3027@1|root,COG3027@2|Bacteria,4NSA5@976|Bacteroidetes,47S0D@768503|Cytophagia	976|Bacteroidetes	D	Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division	zapA	-	-	ko:K09888	-	-	-	-	ko00000,ko03036	-	-	-	ZapA
BYD3_k127_3068975_43	1237149.C900_04991	2.482e-27	114.0	2DSW7@1|root,33HNN@2|Bacteria,4NY8S@976|Bacteroidetes,47SU0@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_3068975_4	1237149.C900_04990	1.825e-310	970.0	COG0072@1|root,COG0073@1|root,COG0072@2|Bacteria,COG0073@2|Bacteria,4NF5B@976|Bacteroidetes,47JAK@768503|Cytophagia	976|Bacteroidetes	J	Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily	pheT	GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006432,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009328,GO:0009987,GO:0010467,GO:0016070,GO:0019538,GO:0019752,GO:0032991,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:1901360,GO:1901564,GO:1901566,GO:1901576,GO:1902494	6.1.1.20	ko:K01890	ko00970,map00970	M00359,M00360	R03660	RC00055,RC00523	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	-	-	-	B3_4,B5,FDX-ACB,tRNA_bind
BYD3_k127_3068975_30	388413.ALPR1_18453	2.669e-54	197.0	COG3358@1|root,COG3358@2|Bacteria,4NNWJ@976|Bacteroidetes,47Q5N@768503|Cytophagia	976|Bacteroidetes	S	Protein of unknown function (DUF1684)	-	-	-	ko:K09164	-	-	-	-	ko00000	-	-	-	DUF1684
BYD3_k127_3068975_20	760192.Halhy_0905	3.79e-101	344.0	COG1680@1|root,COG1680@2|Bacteria,4NFUI@976|Bacteroidetes,1INWP@117747|Sphingobacteriia	976|Bacteroidetes	V	COGs COG1680 Beta-lactamase class C and other penicillin binding protein	-	-	3.5.2.6	ko:K01467	ko01501,ko02020,map01501,map02020	M00628	R06363	RC01499	ko00000,ko00001,ko00002,ko01000	-	-	-	Beta-lactamase
BYD3_k127_3068975_22	1121904.ARBP01000001_gene5955	3.647e-93	310.0	COG2003@1|root,COG2003@2|Bacteria,4NFBF@976|Bacteroidetes,47KTY@768503|Cytophagia	976|Bacteroidetes	E	Belongs to the UPF0758 family	radC	-	-	ko:K03630	-	-	-	-	ko00000	-	-	-	RadC
BYD3_k127_3068975_41	1288963.ADIS_3739	5.874e-29	117.0	COG0268@1|root,COG0268@2|Bacteria,4NSB1@976|Bacteroidetes,47R98@768503|Cytophagia	976|Bacteroidetes	J	Binds directly to 16S ribosomal RNA	rpsT	-	-	ko:K02968	ko03010,map03010	M00178	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_S20p
BYD3_k127_3068975_16	1237149.C900_04984	1.621e-121	398.0	28JI8@1|root,2Z9BM@2|Bacteria,4NE5E@976|Bacteroidetes,47JAX@768503|Cytophagia	976|Bacteroidetes	S	S1 P1 nuclease	-	-	-	-	-	-	-	-	-	-	-	-	S1-P1_nuclease,Zn_dep_PLPC
BYD3_k127_3068975_39	472759.Nhal_0840	4.634e-30	121.0	2C4KB@1|root,32YM4@2|Bacteria,1N74A@1224|Proteobacteria,1SH6J@1236|Gammaproteobacteria,1X1WN@135613|Chromatiales	135613|Chromatiales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_3068975_38	929556.Solca_0474	5.55e-32	132.0	COG2318@1|root,COG2318@2|Bacteria,4NNW4@976|Bacteroidetes,1IT5S@117747|Sphingobacteriia	976|Bacteroidetes	S	DinB superfamily	-	-	-	-	-	-	-	-	-	-	-	-	DinB_2
BYD3_k127_3068975_7	1121904.ARBP01000001_gene5864	8.619e-214	671.0	COG3669@1|root,COG3669@2|Bacteria,4NE74@976|Bacteroidetes,47KQM@768503|Cytophagia	976|Bacteroidetes	G	Alpha-L-fucosidase	fucA	-	3.2.1.51	ko:K01206	ko00511,map00511	-	-	-	ko00000,ko00001,ko01000,ko04147	-	GH29	-	Alpha_L_fucos
BYD3_k127_3068975_11	1237149.C900_04979	1.107e-188	597.0	COG0006@1|root,COG0006@2|Bacteria,4NG40@976|Bacteroidetes,47MAV@768503|Cytophagia	976|Bacteroidetes	E	Belongs to the peptidase M24B family	pepP	-	3.4.11.9	ko:K01262	-	-	-	-	ko00000,ko01000,ko01002	-	-	-	AMP_N,Peptidase_M24
BYD3_k127_3068975_40	886293.Sinac_6575	8.732e-30	129.0	COG5266@1|root,COG5266@2|Bacteria	2|Bacteria	P	PFAM Nickel transport complex, NikM subunit, transmembrane	-	-	-	-	-	-	-	-	-	-	-	-	DUF4198
BYD3_k127_3068975_26	1237149.C900_04977	1.228e-64	223.0	COG0251@1|root,COG0251@2|Bacteria,4NMHF@976|Bacteroidetes,47PT2@768503|Cytophagia	976|Bacteroidetes	J	Endoribonuclease L-PSP	-	-	3.5.99.5	ko:K15067	ko00380,map00380	-	R03887	RC01015	ko00000,ko00001,ko01000	-	-	-	Ribonuc_L-PSP
BYD3_k127_3068975_32	643867.Ftrac_1573	8.62e-54	190.0	COG0316@1|root,COG0316@2|Bacteria,4NQC8@976|Bacteroidetes,47QAX@768503|Cytophagia	976|Bacteroidetes	S	Belongs to the HesB IscA family	iscA	-	-	ko:K13628	-	-	-	-	ko00000,ko03016	-	-	-	Fe-S_biosyn
BYD3_k127_3068975_29	643867.Ftrac_1574	1.196e-57	203.0	2BJ0K@1|root,32D95@2|Bacteria,4NQN9@976|Bacteroidetes,47QR4@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_3068975_31	1122225.AULQ01000002_gene765	4.228e-54	193.0	COG0346@1|root,COG0346@2|Bacteria,4NNGG@976|Bacteroidetes,1I1YS@117743|Flavobacteriia	976|Bacteroidetes	E	Glyoxalase bleomycin resistance protein dioxygenase	mce	-	5.1.99.1	ko:K05606	ko00280,ko00630,ko00640,ko00720,ko01100,ko01120,ko01200,map00280,map00630,map00640,map00720,map01100,map01120,map01200	M00373,M00375,M00376,M00741	R02765,R09979	RC00780,RC02739	ko00000,ko00001,ko00002,ko01000	-	-	-	Glyoxalase_4
BYD3_k127_3068975_14	643867.Ftrac_1576	4.19e-154	494.0	COG0611@1|root,COG0611@2|Bacteria,4NDUT@976|Bacteroidetes,47JR7@768503|Cytophagia	976|Bacteroidetes	H	Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1	thiL	-	2.7.4.16	ko:K00946	ko00730,ko01100,map00730,map01100	M00127	R00617	RC00002	ko00000,ko00001,ko00002,ko01000	-	-	-	AIRS,AIRS_C
BYD3_k127_3068975_33	1237149.C900_04970	4.977e-52	186.0	2BXI1@1|root,32R1C@2|Bacteria,4NR9I@976|Bacteroidetes,47QU5@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_3068975_28	1121904.ARBP01000003_gene6230	1.065e-57	206.0	COG3124@1|root,COG3124@2|Bacteria,4NHQK@976|Bacteroidetes,47QV5@768503|Cytophagia	976|Bacteroidetes	S	Acyl carrier protein phosphodiesterase	acpH	-	-	-	-	-	-	-	-	-	-	-	ACP_PD
BYD3_k127_3068975_44	643867.Ftrac_1600	2.41e-21	98.0	COG4103@1|root,COG4103@2|Bacteria,4NUAN@976|Bacteroidetes,47R5X@768503|Cytophagia	976|Bacteroidetes	S	Tellurite resistance protein TerB	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_3068975_12	1237149.C900_04965	1.485e-187	595.0	COG1228@1|root,COG1228@2|Bacteria,4NFI3@976|Bacteroidetes,47MWF@768503|Cytophagia	976|Bacteroidetes	Q	Amidohydrolase family	-	-	-	-	-	-	-	-	-	-	-	-	Amidohydro_1
BYD3_k127_3068975_3	926549.KI421517_gene3734	1.014e-318	982.0	COG0481@1|root,COG0481@2|Bacteria,4NEJ9@976|Bacteroidetes,47K4P@768503|Cytophagia	976|Bacteroidetes	M	Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner	lepA	-	-	ko:K03596	ko05134,map05134	-	-	-	ko00000,ko00001	-	-	-	EFG_C,GTP_EFTU,GTP_EFTU_D2,LepA_C
BYD3_k127_3068975_18	1237149.C900_04961	4.576e-115	377.0	COG0190@1|root,COG0190@2|Bacteria,4NEJP@976|Bacteroidetes,47K0S@768503|Cytophagia	976|Bacteroidetes	F	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate	folD	GO:0003674,GO:0003824,GO:0004477,GO:0004488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006730,GO:0008150,GO:0008152,GO:0009987,GO:0016491,GO:0016645,GO:0016646,GO:0016787,GO:0016810,GO:0016814,GO:0019238,GO:0044237,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0055114	1.5.1.5,3.5.4.9	ko:K01491	ko00670,ko00720,ko01100,ko01120,ko01200,map00670,map00720,map01100,map01120,map01200	M00140,M00377	R01220,R01655	RC00202,RC00578	ko00000,ko00001,ko00002,ko01000	-	-	-	THF_DHG_CYH,THF_DHG_CYH_C
BYD3_k127_3068975_23	153721.MYP_4653	1.603e-91	305.0	COG0602@1|root,COG0602@2|Bacteria,4NESC@976|Bacteroidetes,47MB1@768503|Cytophagia	976|Bacteroidetes	H	Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7- carboxy-7-deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds	queE	-	4.3.99.3	ko:K10026	ko00790,ko01100,map00790,map01100	-	R10002	RC02989	ko00000,ko00001,ko01000,ko03016	-	-	-	Fer4_14,Radical_SAM
BYD3_k127_3068975_21	929703.KE386491_gene1805	2.959e-99	334.0	COG0147@1|root,COG0147@2|Bacteria,4NFKB@976|Bacteroidetes,47N8A@768503|Cytophagia	976|Bacteroidetes	EH	chorismate binding enzyme	pabB	-	2.6.1.85	ko:K01665	ko00790,map00790	-	R01716	RC00010,RC01418	ko00000,ko00001,ko01000	-	-	-	Chorismate_bind
BYD3_k127_3068975_34	720554.Clocl_1791	4.867e-45	170.0	COG0115@1|root,COG0115@2|Bacteria,1VFIB@1239|Firmicutes,24T0A@186801|Clostridia,3WNY4@541000|Ruminococcaceae	186801|Clostridia	H	Amino-transferase class IV	-	-	4.1.3.38	ko:K02619	ko00790,map00790	-	R05553	RC01843,RC02148	ko00000,ko00001,ko01000	-	-	-	Aminotran_4
BYD3_k127_3068975_9	1124780.ANNU01000019_gene1733	9.133e-200	642.0	COG0823@1|root,COG2885@1|root,COG0823@2|Bacteria,COG2885@2|Bacteria,4NE6G@976|Bacteroidetes,47MTM@768503|Cytophagia	976|Bacteroidetes	MU	Belongs to the ompA family	-	-	-	-	-	-	-	-	-	-	-	-	OmpA,PD40,TPR_16,TPR_2,TPR_8
BYD3_k127_3068975_0	1434325.AZQN01000003_gene2376	0.0	1223.0	COG4206@1|root,COG4206@2|Bacteria,4NZWU@976|Bacteroidetes,47JVR@768503|Cytophagia	976|Bacteroidetes	H	TIGRFAM TonB-dependent outer membrane receptor, SusC RagA subfamily, signature region	-	-	-	-	-	-	-	-	-	-	-	-	CarbopepD_reg_2,Plug,TonB_dep_Rec
BYD3_k127_3068975_15	1434325.AZQN01000003_gene2377	1.692e-139	458.0	COG4198@1|root,COG4198@2|Bacteria,4NFUK@976|Bacteroidetes,47MHZ@768503|Cytophagia	976|Bacteroidetes	S	Starch-binding associating with outer membrane	-	-	-	-	-	-	-	-	-	-	-	-	SusD-like_2
BYD3_k127_3068975_8	1237149.C900_02818	1.769e-212	689.0	COG1629@1|root,COG4771@2|Bacteria,4NF4B@976|Bacteroidetes,47K68@768503|Cytophagia	976|Bacteroidetes	P	PFAM TonB-dependent Receptor Plug	-	-	-	-	-	-	-	-	-	-	-	-	CarbopepD_reg_2,Plug,TonB_dep_Rec
BYD3_k127_3068975_45	1121904.ARBP01000011_gene1504	1.535e-14	85.0	28I8D@1|root,2Z8B7@2|Bacteria,4NM23@976|Bacteroidetes,47NIB@768503|Cytophagia	976|Bacteroidetes	S	Domain of unknown function (DUF4249)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4249
BYD3_k127_3068975_25	1279009.ADICEAN_01464	2.295e-73	249.0	COG0720@1|root,COG0720@2|Bacteria,4NNY0@976|Bacteroidetes,47PVC@768503|Cytophagia	976|Bacteroidetes	H	TIGRFAM 6-pyruvoyl tetrahydropterin synthase QueD family protein	-	-	4.1.2.50,4.2.3.12	ko:K01737	ko00790,ko01100,map00790,map01100	M00842,M00843	R04286,R09959	RC01117,RC02846,RC02847	ko00000,ko00001,ko00002,ko01000,ko03016	-	-	-	PTPS
BYD3_k127_3068975_17	1237149.C900_00199	9.559e-117	386.0	COG0763@1|root,COG0763@2|Bacteria,4NDW3@976|Bacteroidetes,47JDC@768503|Cytophagia	976|Bacteroidetes	M	Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell	lpxB	-	2.4.1.182	ko:K00748	ko00540,ko01100,map00540,map01100	M00060	R04606	RC00005,RC00059	ko00000,ko00001,ko00002,ko01000,ko01003,ko01005	-	GT19	-	LpxB
BYD3_k127_3068975_6	1237149.C900_00196	3.231e-225	702.0	COG1219@1|root,COG1219@2|Bacteria,4NE1B@976|Bacteroidetes,47JDR@768503|Cytophagia	976|Bacteroidetes	O	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP	clpX	GO:0000166,GO:0003674,GO:0003824,GO:0004176,GO:0005488,GO:0005524,GO:0006508,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008233,GO:0009056,GO:0009057,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0019538,GO:0030163,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0042623,GO:0043167,GO:0043168,GO:0043170,GO:0044238,GO:0051301,GO:0070011,GO:0071704,GO:0097159,GO:0097367,GO:0140096,GO:1901265,GO:1901363,GO:1901564,GO:1901565,GO:1901575	-	ko:K03544	ko04112,map04112	-	-	-	ko00000,ko00001,ko03110	-	-	-	AAA_2,ClpB_D2-small,zf-C4_ClpX
BYD3_k127_3068975_19	1237149.C900_00195	8.193e-106	347.0	COG0740@1|root,COG0740@2|Bacteria,4NE20@976|Bacteroidetes,47K60@768503|Cytophagia	976|Bacteroidetes	OU	Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins	clpP	-	3.4.21.92	ko:K01358	ko04112,ko04212,map04112,map04212	-	-	-	ko00000,ko00001,ko01000,ko01002	-	-	-	CLP_protease
BYD3_k127_3068975_13	1237149.C900_00194	3.958e-155	501.0	COG0544@1|root,COG0544@2|Bacteria,4NE99@976|Bacteroidetes,47KTD@768503|Cytophagia	976|Bacteroidetes	O	Trigger factor	tig	-	-	ko:K03545	-	-	-	-	ko00000	-	-	-	Trigger_C,Trigger_N
BYD3_k127_3068975_2	1237149.C900_00193	0.0	1111.0	COG0317@1|root,COG0317@2|Bacteria,4NESY@976|Bacteroidetes,47JQ8@768503|Cytophagia	976|Bacteroidetes	KT	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance	relA	-	2.7.6.5,3.1.7.2	ko:K00951,ko:K01139	ko00230,map00230	-	R00336,R00429	RC00002,RC00078	ko00000,ko00001,ko01000,ko03009	-	-	-	ACT_4,HD_4,RelA_SpoT,TGS
BYD3_k127_3068975_24	1121859.KB890760_gene2098	2.834e-86	287.0	COG0735@1|root,COG0735@2|Bacteria,4NM8S@976|Bacteroidetes,47P99@768503|Cytophagia	976|Bacteroidetes	P	Belongs to the Fur family	fur	-	-	ko:K03711	-	-	-	-	ko00000,ko03000	-	-	-	FUR
BYD3_k127_3068975_36	1237149.C900_00191	6.937e-36	140.0	COG1366@1|root,COG1366@2|Bacteria,4NTNE@976|Bacteroidetes,47R73@768503|Cytophagia	976|Bacteroidetes	T	Belongs to the anti-sigma-factor antagonist family	-	-	-	ko:K04749	-	-	-	-	ko00000,ko03021	-	-	-	STAS
BYD3_k127_3068975_10	1237149.C900_00190	9.517e-200	629.0	COG0104@1|root,COG0104@2|Bacteria,4NGRZ@976|Bacteroidetes,47JQ0@768503|Cytophagia	976|Bacteroidetes	F	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP	purA	GO:0003674,GO:0003824,GO:0004019,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006163,GO:0006164,GO:0006167,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044208,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046033,GO:0046040,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576	6.3.4.4	ko:K01939	ko00230,ko00250,ko01100,map00230,map00250,map01100	M00049	R01135	RC00458,RC00459	ko00000,ko00001,ko00002,ko01000	-	-	-	Adenylsucc_synt
BYD3_k127_3069299_3	153721.MYP_757	1.476e-92	318.0	COG2133@1|root,COG3291@1|root,COG2133@2|Bacteria,COG3291@2|Bacteria,4NIJA@976|Bacteroidetes,47NB2@768503|Cytophagia	976|Bacteroidetes	G	Glucose / Sorbosone dehydrogenase	-	-	-	-	-	-	-	-	-	-	-	-	CBM9_1,GSDH,I-set,Ig_3
BYD3_k127_3069299_6	395961.Cyan7425_2202	2.255e-55	198.0	COG3542@1|root,COG3542@2|Bacteria,1G6JR@1117|Cyanobacteria	1117|Cyanobacteria	S	Cupin superfamily (DUF985)	-	-	-	ko:K09705	-	-	-	-	ko00000	-	-	-	Cupin_5
BYD3_k127_3069299_2	1237149.C900_04937	4.609e-117	383.0	COG0584@1|root,COG0584@2|Bacteria,4NGI1@976|Bacteroidetes,47MFN@768503|Cytophagia	976|Bacteroidetes	C	PFAM Glycerophosphoryl diester phosphodiesterase	glpQ	-	3.1.4.46	ko:K01126	ko00564,map00564	-	R01030,R01470	RC00017,RC00425	ko00000,ko00001,ko01000	-	-	-	GDPD,Phytase-like
BYD3_k127_3069299_1	1237149.C900_04938	6.591e-135	437.0	COG0524@1|root,COG0524@2|Bacteria,4NIHI@976|Bacteroidetes,47NUW@768503|Cytophagia	976|Bacteroidetes	G	Belongs to the carbohydrate kinase PfkB family	-	-	-	-	-	-	-	-	-	-	-	-	PfkB
BYD3_k127_3069299_8	866536.Belba_1807	2.944e-16	79.0	COG0230@1|root,COG0230@2|Bacteria,4NUTV@976|Bacteroidetes,47RUZ@768503|Cytophagia	976|Bacteroidetes	J	Belongs to the bacterial ribosomal protein bL34 family	rpmH	-	-	ko:K02914	ko03010,map03010	M00178	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_L34
BYD3_k127_3069299_7	1237149.C900_04943	4.316e-30	123.0	COG0594@1|root,COG0594@2|Bacteria,4NUMM@976|Bacteroidetes,47S3A@768503|Cytophagia	976|Bacteroidetes	J	RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme	rnpA	-	3.1.26.5	ko:K03536	-	-	-	-	ko00000,ko01000,ko03016	-	-	-	Ribonuclease_P
BYD3_k127_3069299_0	1237149.C900_04944	4.303e-194	619.0	COG0793@1|root,COG0793@2|Bacteria,4NDWU@976|Bacteroidetes,47JTG@768503|Cytophagia	976|Bacteroidetes	M	Belongs to the peptidase S41A family	prc	-	3.4.21.102	ko:K03797	-	-	-	-	ko00000,ko01000,ko01002	-	-	-	PDZ_2,Peptidase_S41
BYD3_k127_3069299_4	679191.HMPREF9018_0193	2.433e-66	233.0	COG1214@1|root,COG1214@2|Bacteria,4NDUR@976|Bacteroidetes,2FPYK@200643|Bacteroidia	976|Bacteroidetes	O	Universal bacterial protein YeaZ	yeaZ	-	-	ko:K14742	-	-	-	-	ko00000,ko03016	-	-	-	Peptidase_M22
BYD3_k127_3069299_5	929562.Emtol_1474	4.623e-64	224.0	28NIX@1|root,2ZBK6@2|Bacteria,4NMEI@976|Bacteroidetes,47MBS@768503|Cytophagia	976|Bacteroidetes	S	Protein of unknown function (DUF2480)	-	-	-	-	-	-	-	-	-	-	-	-	DUF2480
BYD3_k127_3104706_2	1123057.P872_23630	8.838e-198	626.0	COG5297@1|root,COG5297@2|Bacteria,4NG19@976|Bacteroidetes,47KXX@768503|Cytophagia	976|Bacteroidetes	G	Protein of unknown function (DUF1593)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1593
BYD3_k127_3104706_7	485918.Cpin_0314	6.516e-11	74.0	2A7XN@1|root,30WXF@2|Bacteria,4PA9Z@976|Bacteroidetes,1IXZW@117747|Sphingobacteriia	485918.Cpin_0314|-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_3104706_1	1237149.C900_00171	5.063e-223	716.0	COG0577@1|root,COG0577@2|Bacteria	2|Bacteria	V	efflux transmembrane transporter activity	-	-	-	ko:K02004	-	M00258	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	FtsX,MacB_PCD
BYD3_k127_3104706_8	742766.HMPREF9455_00945	0.0003474	51.0	2EJGS@1|root,33D7P@2|Bacteria,4NXUK@976|Bacteroidetes,2FZZG@200643|Bacteroidia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_3104706_5	379066.GAU_0174	1.466e-91	308.0	COG3340@1|root,COG3340@2|Bacteria,1ZUA9@142182|Gemmatimonadetes	142182|Gemmatimonadetes	E	Peptidase family S51	-	-	-	-	-	-	-	-	-	-	-	-	Peptidase_S51
BYD3_k127_3104706_3	1121904.ARBP01000015_gene179	1.832e-183	602.0	COG0577@1|root,COG0577@2|Bacteria,4NDUK@976|Bacteroidetes,47NTJ@768503|Cytophagia	976|Bacteroidetes	V	MacB-like periplasmic core domain	-	-	-	ko:K02004	-	M00258	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	FtsX,MacB_PCD
BYD3_k127_3104706_0	1317122.ATO12_23885	3.48e-266	845.0	COG0577@1|root,COG0577@2|Bacteria,4NDUK@976|Bacteroidetes,1HX0V@117743|Flavobacteriia,2YGR0@290174|Aquimarina	976|Bacteroidetes	V	MacB-like periplasmic core domain	-	-	-	ko:K02004	-	M00258	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	FtsX,MacB_PCD
BYD3_k127_3104706_6	1121904.ARBP01000004_gene1023	3.885e-30	122.0	COG1695@1|root,COG1695@2|Bacteria,4NQJP@976|Bacteroidetes,47QWB@768503|Cytophagia	2|Bacteria	K	Transcriptional regulator PadR-like family	-	-	-	-	-	-	-	-	-	-	-	-	PadR
BYD3_k127_3104706_4	468059.AUHA01000004_gene2373	2.68e-138	450.0	COG2220@1|root,COG2220@2|Bacteria,4NENZ@976|Bacteroidetes,1IURI@117747|Sphingobacteriia	976|Bacteroidetes	S	COGs COG2220 Zn-dependent hydrolase of the beta-lactamase fold	-	-	-	-	-	-	-	-	-	-	-	-	Lactamase_B_2
BYD3_k127_3150750_8	1123057.P872_02615	1.55e-53	199.0	COG1396@1|root,COG1396@2|Bacteria,4NPYD@976|Bacteroidetes,47PQQ@768503|Cytophagia	976|Bacteroidetes	K	Helix-turn-helix XRE-family like proteins	-	-	-	-	-	-	-	-	-	-	-	-	HTH_3
BYD3_k127_3150750_12	1121904.ARBP01000028_gene1707	8.442e-22	101.0	COG0457@1|root,COG0457@2|Bacteria	1121904.ARBP01000028_gene1707|-	S	peptidyl-tyrosine sulfation	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_3150750_0	1237149.C900_02981	4.342e-192	610.0	COG1690@1|root,COG1690@2|Bacteria,4NG8T@976|Bacteroidetes,47N9X@768503|Cytophagia	976|Bacteroidetes	S	tRNA-splicing ligase RtcB	-	-	6.5.1.3	ko:K14415	-	-	-	-	ko00000,ko01000,ko03016	-	-	-	RtcB
BYD3_k127_3150750_4	1121904.ARBP01000002_gene6731	1.843e-120	434.0	COG0642@1|root,COG0745@1|root,COG3292@1|root,COG0745@2|Bacteria,COG2205@2|Bacteria,COG3292@2|Bacteria,4NDXU@976|Bacteroidetes,47JBS@768503|Cytophagia	976|Bacteroidetes	T	Two component regulator propeller	-	-	-	-	-	-	-	-	-	-	-	-	HATPase_c,HTH_18,HisKA,Reg_prop,Response_reg,Y_Y_Y
BYD3_k127_3150750_3	1341155.FSS13T_17060	2.429e-123	406.0	COG1858@1|root,COG1858@2|Bacteria,4NJGU@976|Bacteroidetes,1I0GT@117743|Flavobacteriia,2P00U@237|Flavobacterium	976|Bacteroidetes	C	Di-haem cytochrome c peroxidase	-	-	1.11.1.5	ko:K00428	-	-	-	-	ko00000,ko01000	-	-	-	CCP_MauG
BYD3_k127_3150750_15	926560.KE387023_gene1439	9.01e-11	71.0	2C3FA@1|root,32Y72@2|Bacteria,1WN3G@1297|Deinococcus-Thermus	1297|Deinococcus-Thermus	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_3150750_10	743722.Sph21_2173	1.294e-44	167.0	COG2323@1|root,COG2323@2|Bacteria,4NNDP@976|Bacteroidetes,1IUPV@117747|Sphingobacteriia	976|Bacteroidetes	S	Protein of unknown function (DUF421)	-	-	-	-	-	-	-	-	-	-	-	-	DUF421
BYD3_k127_3150750_5	1123248.KB893328_gene934	2.284e-95	320.0	COG1082@1|root,COG1082@2|Bacteria,4NJ3Z@976|Bacteroidetes	976|Bacteroidetes	G	Xylose isomerase	-	-	-	-	-	-	-	-	-	-	-	-	AP_endonuc_2
BYD3_k127_3150750_11	926549.KI421517_gene1665	1.745e-39	148.0	COG0702@1|root,COG0702@2|Bacteria,4NEJF@976|Bacteroidetes,47MFP@768503|Cytophagia	976|Bacteroidetes	GM	epimerase	-	-	-	-	-	-	-	-	-	-	-	-	DUF2867,Epimerase,NAD_binding_10
BYD3_k127_3150750_14	926549.KI421517_gene1665	7.487e-17	80.0	COG0702@1|root,COG0702@2|Bacteria,4NEJF@976|Bacteroidetes,47MFP@768503|Cytophagia	976|Bacteroidetes	GM	epimerase	-	-	-	-	-	-	-	-	-	-	-	-	DUF2867,Epimerase,NAD_binding_10
BYD3_k127_3150750_7	1317122.ATO12_07065	5.5e-67	233.0	COG0664@1|root,COG0664@2|Bacteria,4NFIS@976|Bacteroidetes,1HXJ2@117743|Flavobacteriia	976|Bacteroidetes	K	CRP FNR family transcriptional regulator	-	-	-	ko:K01420	-	-	-	-	ko00000,ko03000	-	-	-	HTH_Crp_2,cNMP_binding
BYD3_k127_3150750_9	1123276.KB893261_gene4347	7.483e-49	178.0	COG2044@1|root,COG2044@2|Bacteria,4NNYE@976|Bacteroidetes,47PVV@768503|Cytophagia	976|Bacteroidetes	S	DsrE/DsrF-like family	-	-	-	-	-	-	-	-	-	-	-	-	DrsE
BYD3_k127_3150750_13	1122179.KB890480_gene3150	6.66e-19	87.0	295U4@1|root,2ZT58@2|Bacteria,4PQ2P@976|Bacteroidetes	976|Bacteroidetes	S	Protein of unknown function (DUF1059)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1059
BYD3_k127_3150750_1	1121904.ARBP01000004_gene882	1.093e-185	587.0	COG4198@1|root,COG4198@2|Bacteria,4NGQH@976|Bacteroidetes,47NI5@768503|Cytophagia	976|Bacteroidetes	S	Protein of unknown function (DUF1015)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1015
BYD3_k127_3150750_6	760192.Halhy_3107	2.124e-89	302.0	2AC8D@1|root,311T2@2|Bacteria,4NXA6@976|Bacteroidetes	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_3150750_2	700598.Niako_4055	1.045e-144	466.0	COG2267@1|root,COG2267@2|Bacteria,4NFIJ@976|Bacteroidetes,1IQBD@117747|Sphingobacteriia	976|Bacteroidetes	I	Serine aminopeptidase, S33	fpaP	-	3.4.11.5	ko:K01259	ko00330,map00330	-	R00135	-	ko00000,ko00001,ko01000,ko01002	-	-	-	Abhydrolase_1
BYD3_k127_320427_9	1239962.C943_01002	1.387e-165	525.0	COG0841@1|root,COG0841@2|Bacteria,4NDZG@976|Bacteroidetes,47JGB@768503|Cytophagia	976|Bacteroidetes	V	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family	-	-	-	ko:K03296	-	-	-	-	ko00000	2.A.6.2	-	-	ACR_tran
BYD3_k127_320427_6	1239962.C943_01003	1.76e-191	608.0	COG1538@1|root,COG1538@2|Bacteria,4NDZK@976|Bacteroidetes,47KN4@768503|Cytophagia	976|Bacteroidetes	MU	TIGRFAM efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family	-	-	-	ko:K18139,ko:K18300	ko01501,ko02024,map01501,map02024	M00641,M00642,M00643,M00647,M00718,M00768,M00822	-	-	ko00000,ko00001,ko00002,ko01504,ko02000	1.B.17,2.A.6.2	-	-	OEP
BYD3_k127_320427_10	1492737.FEM08_00400	1.041e-158	504.0	COG2326@1|root,COG2326@2|Bacteria,4NFJ5@976|Bacteroidetes,1HWS5@117743|Flavobacteriia,2NSVT@237|Flavobacterium	976|Bacteroidetes	S	nucleotide phosphotransferase	-	-	-	-	-	-	-	-	-	-	-	-	PPK2
BYD3_k127_320427_4	1492737.FEM08_24380	3.666e-198	628.0	COG4580@1|root,COG4580@2|Bacteria,4NHB0@976|Bacteroidetes,1ICN1@117743|Flavobacteriia,2NTIX@237|Flavobacterium	976|Bacteroidetes	G	LamB porin	-	-	-	ko:K02024	-	-	-	-	ko00000,ko02000	1.B.3.1.1	-	-	LamB
BYD3_k127_320427_7	1120965.AUBV01000001_gene3534	1.768e-179	569.0	COG0282@1|root,COG0282@2|Bacteria,4NFI0@976|Bacteroidetes,47NZB@768503|Cytophagia	976|Bacteroidetes	C	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction	ackA	-	2.7.2.1	ko:K00925	ko00430,ko00620,ko00640,ko00680,ko00720,ko01100,ko01120,ko01200,map00430,map00620,map00640,map00680,map00720,map01100,map01120,map01200	M00357,M00579	R00315,R01353	RC00002,RC00043	ko00000,ko00001,ko00002,ko01000	-	-	-	Acetate_kinase
BYD3_k127_320427_0	1124780.ANNU01000032_gene1208	2.199e-291	909.0	COG0280@1|root,COG0857@1|root,COG0280@2|Bacteria,COG0857@2|Bacteria,4NGX5@976|Bacteroidetes,47KUW@768503|Cytophagia	976|Bacteroidetes	C	belongs to the CobB CobQ family	pta	-	2.3.1.8	ko:K00625,ko:K13788	ko00430,ko00620,ko00640,ko00680,ko00720,ko01100,ko01120,ko01200,map00430,map00620,map00640,map00680,map00720,map01100,map01120,map01200	M00357,M00579	R00230,R00921	RC00004,RC02746,RC02816	ko00000,ko00001,ko00002,ko01000	-	-	-	AAA_26,DRTGG,PTA_PTB
BYD3_k127_320427_16	1237149.C900_05257	5.694e-35	145.0	29N3N@1|root,33SHJ@2|Bacteria,4P1XQ@976|Bacteroidetes,47TMQ@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_320427_19	1237149.C900_05257	2.929e-13	80.0	29N3N@1|root,33SHJ@2|Bacteria,4P1XQ@976|Bacteroidetes,47TMQ@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_320427_18	1239962.C943_00133	1.824e-26	116.0	COG1309@1|root,COG1309@2|Bacteria	2|Bacteria	K	transcriptional regulator	MA20_20735	-	-	-	-	-	-	-	-	-	-	-	TetR_N
BYD3_k127_320427_11	1239962.C943_03147	2.462e-120	392.0	COG1611@1|root,COG1611@2|Bacteria,4NF20@976|Bacteroidetes,47M0E@768503|Cytophagia	976|Bacteroidetes	S	Belongs to the LOG family	-	-	3.2.2.10	ko:K06966	ko00230,ko00240,map00230,map00240	-	R00182,R00510	RC00063,RC00318	ko00000,ko00001,ko01000	-	-	-	Lysine_decarbox
BYD3_k127_320427_8	1239962.C943_00984	5.821e-168	539.0	COG3746@1|root,COG3746@2|Bacteria,4NK5I@976|Bacteroidetes	976|Bacteroidetes	P	phosphate-selective porin O and P	-	-	-	ko:K07221	-	-	-	-	ko00000,ko02000	1.B.5.1	-	-	Porin_O_P
BYD3_k127_320427_3	1239962.C943_00985	2.581e-215	672.0	COG3637@1|root,COG3637@2|Bacteria,4NGSV@976|Bacteroidetes	976|Bacteroidetes	M	Phosphate-selective porin O and P	-	-	-	-	-	-	-	-	-	-	-	-	Porin_O_P
BYD3_k127_320427_1	1239962.C943_00986	5.611e-284	876.0	COG1027@1|root,COG1027@2|Bacteria,4P1PR@976|Bacteroidetes,47M4Z@768503|Cytophagia	976|Bacteroidetes	E	Fumarase C C-terminus	-	-	4.3.1.1	ko:K01744	ko00250,ko01100,map00250,map01100	-	R00490	RC00316,RC02799	ko00000,ko00001,ko01000	-	-	-	FumaraseC_C,Lyase_1
BYD3_k127_320427_5	1239962.C943_00987	3.184e-195	612.0	COG0252@1|root,COG0252@2|Bacteria,4NFKG@976|Bacteroidetes,47MY9@768503|Cytophagia	976|Bacteroidetes	EJ	Asparaginase	ansB	-	3.5.1.1	ko:K01424	ko00250,ko00460,ko01100,ko01110,map00250,map00460,map01100,map01110	-	R00485	RC00010,RC02798	ko00000,ko00001,ko01000	-	-	-	Asparaginase
BYD3_k127_320427_2	1239962.C943_00988	1.438e-219	687.0	COG2704@1|root,COG2704@2|Bacteria,4NGDF@976|Bacteroidetes,47T5H@768503|Cytophagia	976|Bacteroidetes	S	Anaerobic c4-dicarboxylate membrane transporter	-	-	-	ko:K07791,ko:K07792	ko02020,map02020	-	-	-	ko00000,ko00001,ko02000	2.A.13.1	-	-	DcuA_DcuB
BYD3_k127_320427_13	1499967.BAYZ01000167_gene6760	1.999e-110	383.0	COG2204@1|root,COG3829@1|root,COG2204@2|Bacteria,COG3829@2|Bacteria	2|Bacteria	T	transcription factor binding	-	-	-	ko:K15836	-	-	-	-	ko00000,ko03000	-	-	-	GAF_2,HTH_8,PAS_9,Response_reg,Sigma54_activat
BYD3_k127_320427_14	1239962.C943_01292	2.944e-66	237.0	2E3FB@1|root,32YE4@2|Bacteria,4P77I@976|Bacteroidetes	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_320427_15	366394.Smed_5191	9.826e-43	165.0	COG1814@1|root,COG1814@2|Bacteria,1R469@1224|Proteobacteria,2U4KR@28211|Alphaproteobacteria,4BCYP@82115|Rhizobiaceae	28211|Alphaproteobacteria	S	VIT family	-	-	-	-	-	-	-	-	-	-	-	-	VIT1
BYD3_k127_320427_12	880072.Desac_2382	2.703e-116	385.0	COG0387@1|root,COG0387@2|Bacteria,1N1MR@1224|Proteobacteria,42MUQ@68525|delta/epsilon subdivisions	1224|Proteobacteria	P	Sodium calcium exchanger membrane	-	-	-	ko:K07300	-	-	-	-	ko00000,ko02000	2.A.19	-	-	Na_Ca_ex
BYD3_k127_3256060_7	1121377.KB906436_gene921	3.741e-150	506.0	COG2909@1|root,COG2909@2|Bacteria	2|Bacteria	K	trisaccharide binding	-	-	-	-	-	-	-	-	-	-	-	-	AAA_16,GerE
BYD3_k127_3256060_20	1279009.ADICEAN_02689	3.953e-33	130.0	2C82G@1|root,32RK9@2|Bacteria,4NSXV@976|Bacteroidetes,47SF4@768503|Cytophagia	976|Bacteroidetes	S	Protein of unknown function (DUF4242)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4242
BYD3_k127_3256060_18	929556.Solca_3838	1.508e-50	186.0	COG2114@1|root,COG2207@1|root,COG2114@2|Bacteria,COG2207@2|Bacteria	2|Bacteria	K	Transcriptional regulator	-	-	4.6.1.1	ko:K01768	ko00230,ko02025,ko04113,ko04213,map00230,map02025,map04113,map04213	M00695	R00089,R00434	RC00295	ko00000,ko00001,ko00002,ko01000	-	-	-	Cupin_6,GAF,Guanylate_cyc,HDOD,HTH_18,PAS_4,PAS_9
BYD3_k127_3256060_22	391603.FBALC1_11242	2.621e-25	113.0	2E3HM@1|root,32YG7@2|Bacteria,4NW2A@976|Bacteroidetes,1I5PX@117743|Flavobacteriia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_3256060_16	153721.MYP_4374	1.706e-63	222.0	COG1225@1|root,COG1225@2|Bacteria,4NNGK@976|Bacteroidetes,47V6G@768503|Cytophagia	976|Bacteroidetes	O	Redoxin	bcp	-	1.11.1.15	ko:K03564	-	-	-	-	ko00000,ko01000	-	-	-	AhpC-TSA
BYD3_k127_3256060_4	616991.JPOO01000001_gene2930	6.075e-179	575.0	COG4315@1|root,COG4315@2|Bacteria,4NI3N@976|Bacteroidetes,1HYWK@117743|Flavobacteriia	976|Bacteroidetes	S	Secreted repeat of unknown function	-	-	-	-	-	-	-	-	-	-	-	-	Lipoprotein_15
BYD3_k127_3256060_17	991.IW20_17870	7.544e-52	190.0	COG0526@1|root,COG0526@2|Bacteria,4NPJ9@976|Bacteroidetes,1ICU2@117743|Flavobacteriia,2NUT1@237|Flavobacterium	976|Bacteroidetes	CO	AhpC/TSA family	-	-	-	-	-	-	-	-	-	-	-	-	AhpC-TSA,Thioredoxin_2
BYD3_k127_3256060_15	1121904.ARBP01000008_gene3384	2.188e-64	233.0	COG0642@1|root,COG2203@1|root,COG2203@2|Bacteria,COG2205@2|Bacteria,4P2BP@976|Bacteroidetes	976|Bacteroidetes	T	signal transduction histidine kinase	-	-	-	-	-	-	-	-	-	-	-	-	HATPase_c,HisKA
BYD3_k127_3256060_23	1492737.FEM08_14220	2.794e-12	70.0	COG1476@1|root,COG1476@2|Bacteria,4PPVF@976|Bacteroidetes	976|Bacteroidetes	K	TRANSCRIPTIONal	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_3256060_5	1047013.AQSP01000134_gene1348	5.833e-173	571.0	COG0577@1|root,COG0577@2|Bacteria	2|Bacteria	V	efflux transmembrane transporter activity	-	-	-	ko:K02004	-	M00258	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	FtsX,MacB_PCD
BYD3_k127_3256060_11	1123277.KB893193_gene3844	7.192e-104	344.0	COG1131@1|root,COG1131@2|Bacteria,4NJ0D@976|Bacteroidetes,47K40@768503|Cytophagia	976|Bacteroidetes	V	ATPases associated with a variety of cellular activities	-	-	-	ko:K01990	-	M00254	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	ABC_tran
BYD3_k127_3256060_12	504472.Slin_5366	2.788e-102	353.0	28HMX@1|root,2Z7WB@2|Bacteria,4NFY2@976|Bacteroidetes,47MX8@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_3256060_21	1237149.C900_01364	6.268e-29	117.0	COG4095@1|root,COG4095@2|Bacteria,4NUQW@976|Bacteroidetes,47R6D@768503|Cytophagia	976|Bacteroidetes	S	Repeated motif present between transmembrane helices in cystinosin, yeast ERS1p, mannose-P-dolichol utilization defect 1, and other hypothetical proteins.	-	-	-	ko:K15383	-	-	-	-	ko00000,ko02000	9.A.58.2	-	-	MtN3_slv,PQ-loop
BYD3_k127_3256060_3	700598.Niako_5315	6.186e-191	606.0	COG1167@1|root,COG1167@2|Bacteria,4NGKQ@976|Bacteroidetes,1IPKF@117747|Sphingobacteriia	976|Bacteroidetes	K	Transcriptional regulator	-	-	-	-	-	-	-	-	-	-	-	-	Aminotran_1_2,GntR
BYD3_k127_3256060_13	153721.MYP_2732	8.608e-74	254.0	COG2197@1|root,COG2197@2|Bacteria,4NKX7@976|Bacteroidetes,47QZF@768503|Cytophagia	976|Bacteroidetes	K	helix_turn_helix, Lux Regulon	-	-	-	-	-	-	-	-	-	-	-	-	GerE,Response_reg
BYD3_k127_3256060_8	153721.MYP_2731	2.847e-141	470.0	COG4585@1|root,COG4585@2|Bacteria,4NJN6@976|Bacteroidetes,47PJ6@768503|Cytophagia	976|Bacteroidetes	T	Histidine kinase	-	-	-	-	-	-	-	-	-	-	-	-	HATPase_c,HisKA_3
BYD3_k127_3256060_6	1270196.JCKI01000001_gene3886	2.584e-151	486.0	COG3693@1|root,COG3693@2|Bacteria,4NE5Z@976|Bacteroidetes,1IRC2@117747|Sphingobacteriia	976|Bacteroidetes	G	SMART glycoside hydrolase family 10	-	-	3.2.1.8	ko:K01181	-	-	-	-	ko00000,ko01000	-	-	-	Glyco_hydro_10
BYD3_k127_3256060_10	1123248.KB893326_gene1542	7.441e-114	374.0	COG3970@1|root,COG3970@2|Bacteria,4NGTH@976|Bacteroidetes,1IQ0W@117747|Sphingobacteriia	976|Bacteroidetes	S	COGs COG3970 Fumarylacetoacetate (FAA) hydrolase family protein	-	-	4.2.1.141	ko:K14259	ko00040,map00040	-	R09186	RC00429	ko00000,ko00001,ko01000	-	-	-	FAA_hydrolase
BYD3_k127_3256060_2	1250232.JQNJ01000001_gene2254	6.858e-202	640.0	COG1012@1|root,COG1012@2|Bacteria,4NEKG@976|Bacteroidetes,1HX1F@117743|Flavobacteriia	976|Bacteroidetes	C	Aldehyde	aldH	-	1.2.1.26,1.2.1.4	ko:K13877,ko:K14519	ko00040,ko00053,ko00930,ko01100,ko01120,ko01220,map00040,map00053,map00930,map01100,map01120,map01220	-	R00264,R05099	RC00080	ko00000,ko00001,ko01000	-	-	-	Aldedh
BYD3_k127_3256060_0	1123248.KB893326_gene1541	9.606e-318	979.0	COG0129@1|root,COG0129@2|Bacteria,4NEKY@976|Bacteroidetes,1IQEN@117747|Sphingobacteriia	976|Bacteroidetes	EG	Belongs to the IlvD Edd family	-	-	-	-	-	-	-	-	-	-	-	-	ILVD_EDD
BYD3_k127_3256060_19	204669.Acid345_1386	1.546e-34	138.0	2EDAV@1|root,33776@2|Bacteria,3Y8RG@57723|Acidobacteria,2JNHN@204432|Acidobacteriia	204432|Acidobacteriia	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_3256060_9	204669.Acid345_1385	2.199e-123	399.0	COG0479@1|root,COG0479@2|Bacteria,3Y70A@57723|Acidobacteria,2JM7N@204432|Acidobacteriia	204432|Acidobacteriia	C	2Fe-2S iron-sulfur cluster binding domain	-	-	1.3.5.1,1.3.5.4	ko:K00240	ko00020,ko00190,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00190,map00650,map00720,map01100,map01110,map01120,map01130,map01200	M00009,M00011,M00149,M00173,M00374,M00376	R02164	RC00045	ko00000,ko00001,ko00002,ko01000	-	-	-	Fer2_3,Fer4_8
BYD3_k127_3256060_1	204669.Acid345_1384	1.445e-289	900.0	COG1053@1|root,COG1053@2|Bacteria,3Y6IU@57723|Acidobacteria,2JKAD@204432|Acidobacteriia	204432|Acidobacteriia	C	Fumarate reductase flavoprotein C-term	-	-	1.3.5.1,1.3.5.4	ko:K00239	ko00020,ko00190,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko05134,map00020,map00190,map00650,map00720,map01100,map01110,map01120,map01130,map01200,map05134	M00009,M00011,M00149,M00173,M00374,M00376	R02164	RC00045	ko00000,ko00001,ko00002,ko01000	-	-	-	FAD_binding_2,Succ_DH_flav_C
BYD3_k127_3256060_14	656024.FsymDg_1434	1.891e-67	238.0	2CEY7@1|root,2Z8CG@2|Bacteria,2GKI0@201174|Actinobacteria,4ES2J@85013|Frankiales	201174|Actinobacteria	S	membrane	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_3257216_9	498211.CJA_0127	3.021e-198	664.0	COG3209@1|root,COG3210@1|root,COG3209@2|Bacteria,COG3210@2|Bacteria,1MVV1@1224|Proteobacteria,1RMPT@1236|Gammaproteobacteria,1FI4C@10|Cellvibrio	1236|Gammaproteobacteria	M	Insecticide toxin TcdB middle/N-terminal region	-	-	-	-	-	-	-	-	-	-	-	-	RHS_repeat,SpvB,TcdB_toxin_midN,VCBS
BYD3_k127_3257216_53	1237149.C900_01983	2.76e-26	128.0	COG3291@1|root,COG4625@1|root,COG3291@2|Bacteria,COG4625@2|Bacteria	2|Bacteria	T	pathogenesis	rhgB	-	4.2.2.23	ko:K07004,ko:K18195	-	-	-	-	ko00000,ko01000	-	PL4	-	CBM-like,CHU_C,He_PIG,PKD,RhgB_N,fn3_3
BYD3_k127_3257216_8	869213.JCM21142_72630	2.209e-199	629.0	COG0004@1|root,COG0004@2|Bacteria,4NDV2@976|Bacteroidetes,47K09@768503|Cytophagia	976|Bacteroidetes	P	Ammonium Transporter	-	-	-	ko:K03320	-	-	-	-	ko00000,ko02000	1.A.11	-	-	Ammonium_transp
BYD3_k127_3257216_48	1168289.AJKI01000001_gene3662	2.26e-38	146.0	COG0347@1|root,COG0347@2|Bacteria,4NQG9@976|Bacteroidetes	976|Bacteroidetes	K	Belongs to the P(II) protein family	-	-	-	ko:K04751	ko02020,map02020	-	-	-	ko00000,ko00001	-	-	-	P-II
BYD3_k127_3257216_10	926549.KI421517_gene2441	9.568e-194	615.0	COG4784@1|root,COG4784@2|Bacteria,4PM59@976|Bacteroidetes,47MK2@768503|Cytophagia	976|Bacteroidetes	S	Peptidase family M48	-	-	-	-	-	-	-	-	-	-	-	-	Peptidase_M48
BYD3_k127_3257216_38	1120966.AUBU01000003_gene1440	1.837e-74	252.0	COG0652@1|root,COG0652@2|Bacteria,4NKQ7@976|Bacteroidetes,47P72@768503|Cytophagia	976|Bacteroidetes	O	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides	ppiB	-	5.2.1.8	ko:K03767,ko:K03768	ko01503,ko04217,map01503,map04217	-	-	-	ko00000,ko00001,ko01000,ko03110,ko04147	-	-	-	Pro_isomerase
BYD3_k127_3257216_21	471854.Dfer_0298	1.281e-141	456.0	COG0627@1|root,COG0627@2|Bacteria,4NGI8@976|Bacteroidetes,47M5Z@768503|Cytophagia	976|Bacteroidetes	S	Putative esterase	xynZ	-	-	-	-	-	-	-	-	-	-	-	Esterase
BYD3_k127_3257216_28	1121481.AUAS01000001_gene4801	2.252e-99	331.0	COG1273@1|root,COG1273@2|Bacteria,4NHHQ@976|Bacteroidetes,47PE5@768503|Cytophagia	976|Bacteroidetes	L	With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD	ku	-	-	ko:K10979	ko03450,map03450	-	-	-	ko00000,ko00001,ko03400	-	-	-	Ku
BYD3_k127_3257216_23	1122621.ATZA01000012_gene3116	1.052e-119	393.0	COG1793@1|root,COG3285@1|root,COG1793@2|Bacteria,COG3285@2|Bacteria,4NESR@976|Bacteroidetes,1IQI9@117747|Sphingobacteriia	976|Bacteroidetes	L	DNA ligase	-	-	6.5.1.1	ko:K01971	ko03450,map03450	-	R00381	RC00005	ko00000,ko00001,ko01000,ko03400	-	-	-	DNA_ligase_A_C,DNA_ligase_A_M,LigD_N
BYD3_k127_3257216_27	1237149.C900_02172	1.796e-99	342.0	COG0642@1|root,COG2205@2|Bacteria,4NG0Y@976|Bacteroidetes,47JUV@768503|Cytophagia	976|Bacteroidetes	T	Histidine kinase	-	-	-	-	-	-	-	-	-	-	-	-	HATPase_c,HisKA,PAS,PAS_9,Response_reg
BYD3_k127_3257216_15	1237149.C900_02173	5.48e-168	534.0	COG0664@1|root,COG0745@1|root,COG0664@2|Bacteria,COG0745@2|Bacteria,4NFB1@976|Bacteroidetes,47JY7@768503|Cytophagia	976|Bacteroidetes	K	Transcriptional regulator, Crp Fnr family	crp	-	-	-	-	-	-	-	-	-	-	-	HTH_Crp_2,Response_reg,cNMP_binding
BYD3_k127_3257216_14	1237149.C900_02438	4.068e-173	554.0	COG2148@1|root,COG2148@2|Bacteria,4NER4@976|Bacteroidetes,47N5W@768503|Cytophagia	976|Bacteroidetes	M	sugar transferase	wcaJ_2	-	2.7.8.6	ko:K00996,ko:K03606	ko05111,map05111	-	-	-	ko00000,ko00001,ko01000,ko01005	-	-	-	Bac_transf,CoA_binding_3
BYD3_k127_3257216_11	1150600.ADIARSV_2156	6.462e-191	605.0	COG4091@1|root,COG4091@2|Bacteria,4NKWV@976|Bacteroidetes	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	NAD_binding_3,Shikimate_DH
BYD3_k127_3257216_12	1124780.ANNU01000002_gene1614	1.892e-181	575.0	COG0579@1|root,COG0579@2|Bacteria,4NE0B@976|Bacteroidetes,47JS1@768503|Cytophagia	976|Bacteroidetes	S	PFAM FAD dependent oxidoreductase	lhgO	-	-	ko:K15736	-	-	-	-	ko00000,ko01000	-	-	-	DAO
BYD3_k127_3257216_7	1150600.ADIARSV_2156	2.235e-205	647.0	COG4091@1|root,COG4091@2|Bacteria,4NKWV@976|Bacteroidetes	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	NAD_binding_3,Shikimate_DH
BYD3_k127_3257216_35	1150600.ADIARSV_2157	1.921e-77	262.0	COG1898@1|root,COG1898@2|Bacteria,4NP11@976|Bacteroidetes,1IT0N@117747|Sphingobacteriia	976|Bacteroidetes	M	Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4- hexulose	-	-	5.1.3.13	ko:K01790	ko00521,ko00523,ko01130,map00521,map00523,map01130	M00793	R06514	RC01531	ko00000,ko00001,ko00002,ko01000	-	-	-	dTDP_sugar_isom
BYD3_k127_3257216_20	1123368.AUIS01000027_gene1348	1.858e-148	477.0	COG0451@1|root,COG0451@2|Bacteria,1PB4Y@1224|Proteobacteria,1RZTV@1236|Gammaproteobacteria	1236|Gammaproteobacteria	M	epimerase dehydratase	-	-	-	-	-	-	-	-	-	-	-	-	Epimerase
BYD3_k127_3257216_22	272123.Anacy_0296	5.544e-126	407.0	COG1208@1|root,COG1208@2|Bacteria,1G00Y@1117|Cyanobacteria,1HIZY@1161|Nostocales	1117|Cyanobacteria	JM	TIGRFAM Glucose-1-phosphate cytidylyltransferase	rfbF	-	2.7.7.33	ko:K00978	ko00500,ko00520,ko01100,map00500,map00520,map01100	-	R00956	RC00002	ko00000,ko00001,ko01000	-	-	-	NTP_transferase
BYD3_k127_3257216_13	760192.Halhy_5448	3.169e-178	567.0	COG2227@1|root,COG2227@2|Bacteria,4NK04@976|Bacteroidetes	976|Bacteroidetes	H	C-methyltransferase C-terminal domain	-	-	-	-	-	-	-	-	-	-	-	-	Methyltransf_13,Methyltransf_14,Methyltransf_23
BYD3_k127_3257216_43	929556.Solca_3097	3.083e-54	193.0	COG2905@1|root,COG2905@2|Bacteria,4NP1Y@976|Bacteroidetes,1ISY1@117747|Sphingobacteriia	976|Bacteroidetes	T	PFAM CBS domain	-	-	-	-	-	-	-	-	-	-	-	-	CBS
BYD3_k127_3257216_24	714943.Mucpa_3117	1.03e-115	387.0	COG1007@1|root,COG1007@2|Bacteria,4NF94@976|Bacteroidetes,1IP5V@117747|Sphingobacteriia	976|Bacteroidetes	C	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient	nuoN	-	1.6.5.3	ko:K00343	ko00190,ko01100,map00190,map01100	M00144	R11945	RC00061	ko00000,ko00001,ko00002,ko01000	3.D.1	-	-	Proton_antipo_M
BYD3_k127_3257216_17	153721.MYP_728	6.936e-166	535.0	COG1008@1|root,COG1008@2|Bacteria,4NEJ1@976|Bacteroidetes,47KUB@768503|Cytophagia	976|Bacteroidetes	C	proton-translocating NADH-quinone oxidoreductase, chain M	-	-	1.6.5.3	ko:K00342	ko00190,ko01100,map00190,map01100	M00144	R11945	RC00061	ko00000,ko00001,ko00002,ko01000	3.D.1	-	-	Oxidored_q5_N,Proton_antipo_M
BYD3_k127_3257216_5	929556.Solca_3729	1.765e-213	680.0	COG1009@1|root,COG1009@2|Bacteria,4NEBM@976|Bacteroidetes,1IQ9D@117747|Sphingobacteriia	976|Bacteroidetes	CP	COG1009 NADH ubiquinone oxidoreductase subunit 5 (chain L) Multisubunit Na H antiporter MnhA subunit	nuoL	-	1.6.5.3	ko:K00341	ko00190,ko01100,map00190,map01100	M00144	R11945	RC00061	ko00000,ko00001,ko00002,ko01000	3.D.1	-	-	Proton_antipo_C,Proton_antipo_M,Proton_antipo_N
BYD3_k127_3257216_50	485917.Phep_4072	7.46e-37	141.0	COG0713@1|root,COG0713@2|Bacteria,4NTBP@976|Bacteroidetes,1ITKQ@117747|Sphingobacteriia	976|Bacteroidetes	C	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient	nuoK	-	1.6.5.3	ko:K00340	ko00190,ko01100,map00190,map01100	M00144	R11945	RC00061	ko00000,ko00001,ko00002,ko01000	3.D.1	-	-	Oxidored_q2
BYD3_k127_3257216_44	153721.MYP_731	1.145e-46	173.0	COG0839@1|root,COG0839@2|Bacteria,4NP2V@976|Bacteroidetes,47PS7@768503|Cytophagia	976|Bacteroidetes	C	PFAM NADH-ubiquinone plastoquinone oxidoreductase chain 6	nuoJ	-	1.6.5.3	ko:K00339	ko00190,ko01100,map00190,map01100	M00144	R11945	RC00061	ko00000,ko00001,ko00002,ko01000	3.D.1	-	-	Oxidored_q3
BYD3_k127_3257216_34	755732.Fluta_1965	1.684e-77	263.0	COG1143@1|root,COG1143@2|Bacteria,4NI9I@976|Bacteroidetes,1I2F9@117743|Flavobacteriia	976|Bacteroidetes	C	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient	nuoI	-	1.6.5.3	ko:K00338	ko00190,ko01100,map00190,map01100	M00144	R11945	RC00061	ko00000,ko00001,ko00002,ko01000	3.D.1	-	-	Fer4
BYD3_k127_3257216_19	269798.CHU_1375	1.805e-159	508.0	COG1005@1|root,COG1005@2|Bacteria,4NGK7@976|Bacteroidetes,47K9J@768503|Cytophagia	976|Bacteroidetes	C	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone	nuoH	-	1.6.5.3	ko:K00337	ko00190,ko01100,map00190,map01100	M00144	R11945	RC00061	ko00000,ko00001,ko00002,ko01000	3.D.1	-	-	NADHdh
BYD3_k127_3257216_18	153721.MYP_734	3.016e-161	513.0	COG1034@1|root,COG1034@2|Bacteria,4NH3P@976|Bacteroidetes,47K4R@768503|Cytophagia	976|Bacteroidetes	C	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region	nuoG	-	1.6.5.3	ko:K00336	ko00190,ko01100,map00190,map01100	M00144	R11945	RC00061	ko00000,ko00001,ko00002,ko01000	3.D.1	-	-	Fer2_4,NADH-G_4Fe-4S_3
BYD3_k127_3257216_46	1237149.C900_04403	5.335e-43	161.0	COG0399@1|root,COG0399@2|Bacteria,4NS7A@976|Bacteroidetes,47X4X@768503|Cytophagia	976|Bacteroidetes	J	23S rRNA-intervening sequence protein	-	-	-	-	-	-	-	-	-	-	-	-	23S_rRNA_IVP
BYD3_k127_3257216_2	926549.KI421517_gene1952	3.942e-241	749.0	COG1894@1|root,COG1894@2|Bacteria,4NFB5@976|Bacteroidetes,47NNF@768503|Cytophagia	976|Bacteroidetes	C	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain	nuoF	-	1.12.1.3,1.6.5.3	ko:K00335,ko:K18331	ko00190,ko01100,map00190,map01100	M00144	R11945	RC00061	ko00000,ko00001,ko00002,ko01000	3.D.1	-	-	2Fe-2S_thioredx,Complex1_51K,Fer4,NADH_4Fe-4S,SLBB
BYD3_k127_3257216_39	700598.Niako_7066	5.93e-69	237.0	COG1905@1|root,COG1905@2|Bacteria,4NHIQ@976|Bacteroidetes,1IS1Q@117747|Sphingobacteriia	976|Bacteroidetes	C	NADH-quinone oxidoreductase, E subunit	nuoE	-	1.6.5.3	ko:K00334	ko00190,ko01100,map00190,map01100	M00144	R11945	RC00061	ko00000,ko00001,ko00002,ko01000	3.D.1	-	-	2Fe-2S_thioredx
BYD3_k127_3257216_6	153721.MYP_737	1.406e-212	665.0	COG0649@1|root,COG0649@2|Bacteria,4NF02@976|Bacteroidetes,47KBK@768503|Cytophagia	976|Bacteroidetes	C	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient	nuoD	-	1.6.5.3	ko:K00333	ko00190,ko01100,map00190,map01100	M00144	R11945	RC00061	ko00000,ko00001,ko00002,ko01000	3.D.1	-	-	Complex1_49kDa
BYD3_k127_3257216_42	929556.Solca_3738	3.687e-55	198.0	COG0852@1|root,COG0852@2|Bacteria,4NPZH@976|Bacteroidetes,1ISEW@117747|Sphingobacteriia	976|Bacteroidetes	C	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient	nuoC	-	1.6.5.3	ko:K00332	ko00190,ko01100,map00190,map01100	M00144	R11945	RC00061	ko00000,ko00001,ko00002,ko01000	3.D.1	-	-	Complex1_30kDa
BYD3_k127_3257216_31	929556.Solca_3739	1.272e-94	312.0	COG0377@1|root,COG0377@2|Bacteria,4NFKT@976|Bacteroidetes,1INQ8@117747|Sphingobacteriia	976|Bacteroidetes	C	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient	nuoB	-	1.6.5.3	ko:K00331	ko00190,ko01100,map00190,map01100	M00144	R11945	RC00061	ko00000,ko00001,ko00002,ko01000	3.D.1	-	-	Oxidored_q6
BYD3_k127_3257216_45	1434325.AZQN01000003_gene2099	4.121e-45	166.0	COG0838@1|root,COG0838@2|Bacteria,4NQJB@976|Bacteroidetes,47Q47@768503|Cytophagia	976|Bacteroidetes	C	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient	nuoA	-	1.6.5.3	ko:K00330	ko00190,ko01100,map00190,map01100	M00144	R11945	RC00061	ko00000,ko00001,ko00002,ko01000	3.D.1	-	-	Oxidored_q4
BYD3_k127_3257216_40	714943.Mucpa_3116	3.101e-58	208.0	COG0586@1|root,COG0586@2|Bacteria,4NMBP@976|Bacteroidetes,1IRXI@117747|Sphingobacteriia	976|Bacteroidetes	S	PFAM SNARE associated Golgi protein	-	-	-	ko:K03975	-	-	-	-	ko00000	-	-	-	SNARE_assoc
BYD3_k127_3257216_36	1550091.JROE01000008_gene3367	3.598e-76	270.0	COG1520@1|root,COG1520@2|Bacteria,4NFA9@976|Bacteroidetes,1ITHY@117747|Sphingobacteriia	976|Bacteroidetes	S	PQQ-like domain	-	-	-	-	-	-	-	-	-	-	-	-	PQQ,PQQ_2,PQQ_3
BYD3_k127_3257216_49	1089547.KB913013_gene4731	2.394e-38	151.0	COG1556@1|root,COG1556@2|Bacteria,4NQSF@976|Bacteroidetes,47QGX@768503|Cytophagia	976|Bacteroidetes	S	LUD domain	lutC	-	-	ko:K00782	-	-	-	-	ko00000	-	-	-	LUD_dom
BYD3_k127_3257216_3	391596.PBAL39_19404	8.589e-233	728.0	COG1139@1|root,COG1139@2|Bacteria,4NEBT@976|Bacteroidetes,1IR6B@117747|Sphingobacteriia	976|Bacteroidetes	C	4Fe-4S ferredoxin	-	-	-	ko:K18929	-	-	-	-	ko00000	-	-	-	DUF3390,Fer4_8,LUD_dom
BYD3_k127_3257216_25	485917.Phep_2946	6.938e-114	371.0	COG0247@1|root,COG0247@2|Bacteria,4NIMP@976|Bacteroidetes,1INN8@117747|Sphingobacteriia	976|Bacteroidetes	C	Fe-S oxidoreductase	-	-	-	ko:K18928	-	-	-	-	ko00000	-	-	-	CCG
BYD3_k127_3257216_30	1237149.C900_04190	4.805e-96	328.0	COG0457@1|root,COG0457@2|Bacteria,4NFHT@976|Bacteroidetes,47PQF@768503|Cytophagia	976|Bacteroidetes	S	Tetratricopeptide repeat	-	-	-	-	-	-	-	-	-	-	-	-	TPR_1,TPR_11,TPR_16,TPR_17,TPR_19,TPR_2,TPR_8
BYD3_k127_3257216_0	1237149.C900_04189	0.0	1319.0	COG0188@1|root,COG0188@2|Bacteria,4NDWQ@976|Bacteroidetes,47K30@768503|Cytophagia	976|Bacteroidetes	L	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner	gyrA	-	5.99.1.3	ko:K02469	-	-	-	-	ko00000,ko01000,ko03032,ko03400	-	-	-	DNA_gyraseA_C,DNA_topoisoIV
BYD3_k127_3257216_29	1237149.C900_01235	1.095e-98	332.0	2EG6T@1|root,339YP@2|Bacteria,4NXNK@976|Bacteroidetes,47T48@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_3257216_16	1237149.C900_01232	2.149e-167	538.0	COG3014@1|root,COG3014@2|Bacteria,4NIIU@976|Bacteroidetes,47K7B@768503|Cytophagia	976|Bacteroidetes	S	protein conserved in bacteria	-	-	-	ko:K09859	-	-	-	-	ko00000	-	-	-	TPR_2
BYD3_k127_3257216_37	1237149.C900_01231	3.99e-76	261.0	COG3417@1|root,COG3417@2|Bacteria,4NFXF@976|Bacteroidetes,47Q1R@768503|Cytophagia	976|Bacteroidetes	M	Peptidoglycan-synthase activator LpoB	-	-	-	ko:K07337	-	-	-	-	ko00000	-	-	-	LpoB
BYD3_k127_3257216_32	641524.ADICYQ_5617	2.686e-88	296.0	COG0036@1|root,COG0036@2|Bacteria,4NDXB@976|Bacteroidetes,47N3P@768503|Cytophagia	976|Bacteroidetes	G	Belongs to the ribulose-phosphate 3-epimerase family	rpe	-	5.1.3.1	ko:K01783	ko00030,ko00040,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00040,map00710,map01100,map01110,map01120,map01130,map01200,map01230	M00004,M00007	R01529	RC00540	ko00000,ko00001,ko00002,ko01000	-	-	-	Ribul_P_3_epim
BYD3_k127_3257216_26	1237149.C900_01228	5.971e-112	380.0	COG1404@1|root,COG1404@2|Bacteria,4NEIJ@976|Bacteroidetes,47KS3@768503|Cytophagia	976|Bacteroidetes	O	Peptidase S8 and S53 subtilisin kexin sedolisin	aprN	-	-	-	-	-	-	-	-	-	-	-	Peptidase_S8
BYD3_k127_3257216_47	1237149.C900_01227	3.546e-40	157.0	298K1@1|root,2ZVQX@2|Bacteria,4NNNX@976|Bacteroidetes,47Q8A@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_3257216_51	1166018.FAES_3799	5.871e-30	126.0	COG0135@1|root,COG0135@2|Bacteria,4NMKY@976|Bacteroidetes,47PJ8@768503|Cytophagia	976|Bacteroidetes	E	isomerase	-	-	5.3.1.24	ko:K01817	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	M00023	R03509	RC00945	ko00000,ko00001,ko00002,ko01000	-	-	-	PRAI
BYD3_k127_3257216_4	761193.Runsl_2857	1.631e-214	679.0	COG3119@1|root,COG3119@2|Bacteria,4NHH7@976|Bacteroidetes,47JYR@768503|Cytophagia	976|Bacteroidetes	P	PFAM sulfatase	mdsA	-	-	-	-	-	-	-	-	-	-	-	DUF4976,Sulfatase
BYD3_k127_3257216_1	700598.Niako_3938	1.084e-316	978.0	COG0405@1|root,COG0405@2|Bacteria,4NG3X@976|Bacteroidetes,1IPXR@117747|Sphingobacteriia	976|Bacteroidetes	E	Gamma-glutamyltranspeptidase	-	-	2.3.2.2,3.4.19.13	ko:K00681	ko00430,ko00460,ko00480,ko01100,map00430,map00460,map00480,map01100	-	R00494,R01262,R01687,R03867,R03916,R03970,R03971,R04935	RC00064,RC00090,RC00096	ko00000,ko00001,ko01000,ko01002	-	-	-	G_glu_transpept
BYD3_k127_3257216_33	1123276.KB893301_gene4301	4.243e-81	274.0	28NN4@1|root,2ZBNJ@2|Bacteria,4NMVI@976|Bacteroidetes,47PGF@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_3257216_41	1121904.ARBP01000006_gene3887	4.117e-56	212.0	COG4421@1|root,COG4421@2|Bacteria,4NY2Z@976|Bacteroidetes,47SQY@768503|Cytophagia	976|Bacteroidetes	G	Protein of unknown function (DUF563)	-	-	-	-	-	-	-	-	-	-	-	-	DUF563
BYD3_k127_3257216_52	641524.ADICYQ_0152	1.052e-27	124.0	COG3291@1|root,COG3291@2|Bacteria,4PBYJ@976|Bacteroidetes,47WIS@768503|Cytophagia	976|Bacteroidetes	S	Di-glucose binding within endoplasmic reticulum	-	-	-	-	-	-	-	-	-	-	-	-	Malectin
BYD3_k127_3304008_19	1168034.FH5T_07990	7.707e-57	202.0	COG1943@1|root,COG1943@2|Bacteria,4NQTF@976|Bacteroidetes	976|Bacteroidetes	L	Transposase	-	-	-	-	-	-	-	-	-	-	-	-	Y1_Tnp
BYD3_k127_3304008_8	760192.Halhy_1439	1.715e-153	496.0	COG0671@1|root,COG0671@2|Bacteria,4NF9W@976|Bacteroidetes,1IV2I@117747|Sphingobacteriia	976|Bacteroidetes	I	PAP2 superfamily	-	-	-	-	-	-	-	-	-	-	-	-	PAP2
BYD3_k127_3304008_1	760192.Halhy_1438	0.0	1358.0	COG4888@1|root,COG4888@2|Bacteria,4NEE8@976|Bacteroidetes	976|Bacteroidetes	S	PFAM ASPIC and UnbV	-	-	-	-	-	-	-	-	-	-	-	-	UnbV_ASPIC,VCBS
BYD3_k127_3304008_14	1122918.KB907280_gene254	7.048e-78	282.0	COG3934@1|root,COG3934@2|Bacteria,1VUFZ@1239|Firmicutes	1239|Firmicutes	G	Domain of unknown function (DUF5060)	-	-	-	-	-	-	-	-	-	-	-	-	DUF5060
BYD3_k127_3304008_6	313603.FB2170_14288	4.26e-196	623.0	COG3419@1|root,COG3419@2|Bacteria,4NGV9@976|Bacteroidetes	976|Bacteroidetes	NU	Tfp pilus assembly protein tip-associated adhesin	-	-	-	-	-	-	-	-	-	-	-	-	PQQ,PQQ_2
BYD3_k127_3304008_13	382464.ABSI01000012_gene2185	2.681e-84	289.0	COG1082@1|root,COG1082@2|Bacteria	2|Bacteria	G	myo-inosose-2 dehydratase activity	-	-	-	-	-	-	-	-	-	-	-	-	AP_endonuc_2,Copper-bind,Cytochrom_C,Laminin_G_3
BYD3_k127_3304008_5	1123277.KB893206_gene3445	6.443e-223	711.0	COG3525@1|root,COG3525@2|Bacteria,4NH5U@976|Bacteroidetes	976|Bacteroidetes	G	domain, Protein	-	-	-	-	-	-	-	-	-	-	-	-	Glyco_hydro_20b
BYD3_k127_3304008_3	1124780.ANNU01000025_gene3330	5.735e-251	798.0	COG5009@1|root,COG5009@2|Bacteria,4NECJ@976|Bacteroidetes,47MZQ@768503|Cytophagia	976|Bacteroidetes	M	Transglycosylase	-	-	2.4.1.129,3.4.16.4	ko:K05366	ko00550,ko01100,ko01501,map00550,map01100,map01501	-	-	-	ko00000,ko00001,ko01000,ko01003,ko01011	-	GT51	-	Transgly,Transpeptidase
BYD3_k127_3304008_0	1121481.AUAS01000005_gene2027	0.0	1684.0	COG0366@1|root,COG3281@1|root,COG0366@2|Bacteria,COG3281@2|Bacteria,4NFE4@976|Bacteroidetes,47Y5G@768503|Cytophagia	976|Bacteroidetes	G	Maltogenic Amylase, C-terminal domain	-	-	3.2.1.1,5.4.99.16	ko:K05343	ko00500,ko01100,map00500,map01100	-	R01557,R02108,R02112,R11262	RC01816	ko00000,ko00001,ko01000	-	GH13	-	Alpha-amylase,Malt_amylase_C
BYD3_k127_3304008_11	616991.JPOO01000003_gene119	2.595e-123	404.0	COG2159@1|root,COG2159@2|Bacteria,4NG9U@976|Bacteroidetes,1HYFP@117743|Flavobacteriia,23GX1@178469|Arenibacter	976|Bacteroidetes	S	Amidohydrolase	-	-	-	-	-	-	-	-	-	-	-	-	Amidohydro_2
BYD3_k127_3304008_9	929713.NIASO_00660	9.18e-153	490.0	COG4299@1|root,COG4299@2|Bacteria,4NH8T@976|Bacteroidetes,1INPE@117747|Sphingobacteriia	976|Bacteroidetes	S	COGs COG4299 conserved	-	-	-	-	-	-	-	-	-	-	-	-	DUF5009
BYD3_k127_3304008_24	436308.Nmar_0389	4.491e-09	63.0	arCOG02709@1|root,arCOG02709@2157|Archaea	2157|Archaea	S	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily	-	-	4.4.1.5	ko:K01759	ko00620,map00620	-	R02530	RC00004,RC00740	ko00000,ko00001,ko01000	-	-	-	Glyoxalase
BYD3_k127_3304008_7	926549.KI421517_gene3714	7.15e-192	608.0	COG1252@1|root,COG1252@2|Bacteria,4NE0H@976|Bacteroidetes,47K1Q@768503|Cytophagia	976|Bacteroidetes	C	PFAM FAD-dependent pyridine nucleotide-disulphide oxidoreductase	-	-	1.6.99.3	ko:K03885	ko00190,map00190	-	-	-	ko00000,ko00001,ko01000	-	-	-	Pyr_redox_2
BYD3_k127_3304008_23	1237149.C900_00151	1.134e-11	72.0	COG0642@1|root,COG2205@2|Bacteria	1237149.C900_00151|-	T	PhoQ Sensor	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_3304008_10	1279009.ADICEAN_02619	9.283e-145	481.0	COG1629@1|root,COG4771@2|Bacteria	2|Bacteria	P	TonB-dependent receptor	-	-	-	ko:K02014	-	-	-	-	ko00000,ko02000	1.B.14	-	-	Plug
BYD3_k127_3304008_20	997346.HMPREF9374_0812	8.162e-50	180.0	COG2764@1|root,COG2764@2|Bacteria	2|Bacteria	E	glyoxalase bleomycin resistance protein dioxygenase	-	-	-	-	-	-	-	-	-	-	-	-	Glyoxalase
BYD3_k127_3304008_21	269798.CHU_1584	6.474e-29	116.0	COG1942@1|root,COG1942@2|Bacteria,4NV4Q@976|Bacteroidetes,47SGK@768503|Cytophagia	976|Bacteroidetes	S	Tautomerase enzyme	-	-	5.3.2.6	ko:K01821	ko00362,ko00621,ko00622,ko01100,ko01120,ko01220,map00362,map00621,map00622,map01100,map01120,map01220	M00569	R03966,R05389	RC01040,RC01355	ko00000,ko00001,ko00002,ko01000	-	-	-	Tautomerase
BYD3_k127_3304008_26	1117318.PRUB_20564	1.239e-06	59.0	2EBHR@1|root,32TFF@2|Bacteria,1R3P0@1224|Proteobacteria,1S9WH@1236|Gammaproteobacteria,2Q34D@267888|Pseudoalteromonadaceae	1236|Gammaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_3304008_27	391603.FBALC1_16832	0.000541	51.0	2BXJ3@1|root,32JAR@2|Bacteria,4NQKG@976|Bacteroidetes,1I4MR@117743|Flavobacteriia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	Lipocalin_5
BYD3_k127_3304008_22	485917.Phep_1487	3.226e-20	95.0	COG4430@1|root,COG4430@2|Bacteria,4NNT1@976|Bacteroidetes,1IXI0@117747|Sphingobacteriia	976|Bacteroidetes	S	Domain of unknown function (DUF1905)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1905,OmdA
BYD3_k127_3304008_12	1123248.KB893338_gene2304	7.846e-97	327.0	COG3595@1|root,COG3595@2|Bacteria,4NJCC@976|Bacteroidetes,1IRTV@117747|Sphingobacteriia	976|Bacteroidetes	S	Putative adhesin	-	-	-	-	-	-	-	-	-	-	-	-	DUF4097
BYD3_k127_3304008_18	1392498.JQLH01000001_gene1343	7.817e-62	219.0	COG4339@1|root,COG4339@2|Bacteria,4NP5E@976|Bacteroidetes,1I2GP@117743|Flavobacteriia	976|Bacteroidetes	S	protein conserved in bacteria	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_3304008_16	1469557.JSWF01000024_gene1804	1.894e-66	233.0	COG3279@1|root,COG3279@2|Bacteria,4NI3K@976|Bacteroidetes,1HZ0N@117743|Flavobacteriia	976|Bacteroidetes	T	Response regulator of the LytR AlgR family	-	-	-	ko:K02477	-	-	-	-	ko00000,ko02022	-	-	-	LytTR,Response_reg
BYD3_k127_3304008_17	313606.M23134_05437	1.697e-65	236.0	COG2972@1|root,COG2972@2|Bacteria,4NH1Q@976|Bacteroidetes,47QMN@768503|Cytophagia	976|Bacteroidetes	T	Histidine kinase	-	-	-	-	-	-	-	-	-	-	-	-	HATPase_c_5,His_kinase
BYD3_k127_3304008_25	1123037.AUDE01000014_gene342	5.596e-07	56.0	COG0811@1|root,COG0811@2|Bacteria,4NVQH@976|Bacteroidetes,1I40C@117743|Flavobacteriia	976|Bacteroidetes	U	MotA/TolQ/ExbB proton channel family	-	-	-	-	-	-	-	-	-	-	-	-	MotA_ExbB
BYD3_k127_3304008_4	1239962.C943_00386	8.448e-238	759.0	COG0577@1|root,COG0577@2|Bacteria,4NDUK@976|Bacteroidetes,47JJN@768503|Cytophagia	976|Bacteroidetes	V	FtsX-like permease family	-	-	-	-	-	-	-	-	-	-	-	-	FtsX,MacB_PCD
BYD3_k127_3304008_2	926549.KI421517_gene3299	0.0	1212.0	COG1874@1|root,COG1874@2|Bacteria,4NQBQ@976|Bacteroidetes,47QIS@768503|Cytophagia	976|Bacteroidetes	G	Hypothetical glycosyl hydrolase 6	-	-	-	-	-	-	-	-	-	-	-	-	GHL6,Glyco_hydro_42M
BYD3_k127_3304008_15	714943.Mucpa_6418	2.751e-69	238.0	COG1943@1|root,COG1943@2|Bacteria,4NQTF@976|Bacteroidetes,1ISSF@117747|Sphingobacteriia	976|Bacteroidetes	L	PFAM Transposase IS200 like	-	-	-	-	-	-	-	-	-	-	-	-	Y1_Tnp
BYD3_k127_3306248_13	991.IW20_22775	1.368e-102	377.0	COG4932@1|root,COG5184@1|root,COG4932@2|Bacteria,COG5184@2|Bacteria,4PKBH@976|Bacteroidetes,1IAJ4@117743|Flavobacteriia,2P0JQ@237|Flavobacterium	2|Bacteria	DZ	regulator of chromosome condensation, RCC1	sprB	-	-	-	-	-	-	-	-	-	-	-	Big_2,CHU_C,DUF11,SprB
BYD3_k127_3306248_45	1229487.AMYW01000001_gene3932	0.0005687	47.0	COG1520@1|root,COG3391@1|root,COG1520@2|Bacteria,COG3391@2|Bacteria,4PMIF@976|Bacteroidetes,1IJU9@117743|Flavobacteriia,2P0NC@237|Flavobacterium	976|Bacteroidetes	O	amine dehydrogenase activity	-	-	-	-	-	-	-	-	-	-	-	-	SprB
BYD3_k127_3306248_0	1237149.C900_03347	0.0	1522.0	COG1196@1|root,COG1196@2|Bacteria,4NHWQ@976|Bacteroidetes,47JHP@768503|Cytophagia	976|Bacteroidetes	D	Required for chromosome condensation and partitioning	smc	-	-	ko:K03529	-	-	-	-	ko00000,ko03036	-	-	-	SMC_N,SMC_hinge
BYD3_k127_3306248_23	1237149.C900_02543	7.794e-69	241.0	COG0745@1|root,COG0745@2|Bacteria,4NG7D@976|Bacteroidetes,47MJ5@768503|Cytophagia	976|Bacteroidetes	T	Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain	phoP	-	-	ko:K07657,ko:K07658	ko02020,map02020	M00434	-	-	ko00000,ko00001,ko00002,ko02022	-	-	-	Response_reg,Trans_reg_C
BYD3_k127_3306248_12	1237149.C900_02544	9.018e-124	404.0	COG1819@1|root,COG1819@2|Bacteria,4NFYF@976|Bacteroidetes,47XWY@768503|Cytophagia	976|Bacteroidetes	CG	Glycosyl transferase family 1	-	-	-	-	-	-	-	-	-	-	-	-	Glyco_trans_1_3
BYD3_k127_3306248_10	1237149.C900_02545	1.398e-139	449.0	COG2908@1|root,COG2908@2|Bacteria,4NFD8@976|Bacteroidetes,47MNV@768503|Cytophagia	976|Bacteroidetes	S	Calcineurin-like phosphoesterase superfamily domain	-	-	-	-	-	-	-	-	-	-	-	-	Metallophos,Metallophos_2
BYD3_k127_3306248_34	1519464.HY22_00575	6.274e-47	174.0	COG4783@1|root,COG4783@2|Bacteria	2|Bacteria	L	chaperone-mediated protein folding	-	-	-	-	-	-	-	-	-	-	-	-	TPR_14,TPR_16,TPR_19,TPR_8
BYD3_k127_3306248_18	1237149.C900_03416	1.102e-82	279.0	COG0220@1|root,COG0220@2|Bacteria,4NG4V@976|Bacteroidetes,47JY6@768503|Cytophagia	976|Bacteroidetes	J	Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA	trmB	GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008176,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016423,GO:0016740,GO:0016741,GO:0030488,GO:0032259,GO:0032991,GO:0034470,GO:0034641,GO:0034660,GO:0034708,GO:0036265,GO:0043170,GO:0043412,GO:0043414,GO:0043527,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0106004,GO:0140098,GO:0140101,GO:1901360,GO:1902494,GO:1990234	2.1.1.33	ko:K03439	-	-	-	-	ko00000,ko01000,ko03016	-	-	-	Methyltransf_4
BYD3_k127_3306248_6	866536.Belba_3019	2.605e-153	496.0	COG0285@1|root,COG0285@2|Bacteria,4NES8@976|Bacteroidetes,47K0F@768503|Cytophagia	976|Bacteroidetes	H	Belongs to the folylpolyglutamate synthase family	folC	-	6.3.2.12,6.3.2.17	ko:K11754	ko00790,ko01100,map00790,map01100	M00126,M00841	R00942,R02237,R04241	RC00064,RC00090,RC00162	ko00000,ko00001,ko00002,ko01000	-	-	-	Mur_ligase_M
BYD3_k127_3306248_41	1185876.BN8_00750	8.846e-15	76.0	2EBEV@1|root,335FG@2|Bacteria,4NWFJ@976|Bacteroidetes,47S0U@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_3306248_27	1237149.C900_03418	2.197e-60	220.0	COG3170@1|root,COG3170@2|Bacteria,4PKQP@976|Bacteroidetes,47JDN@768503|Cytophagia	976|Bacteroidetes	NU	Tfp pilus assembly protein FimV	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_3306248_35	1237149.C900_03419	6.454e-46	168.0	COG0848@1|root,COG0848@2|Bacteria,4NNI6@976|Bacteroidetes,47R2X@768503|Cytophagia	976|Bacteroidetes	U	Biopolymer transport protein ExbD TolR	exbD	-	-	ko:K03559	-	-	-	-	ko00000,ko02000	1.A.30.2.1	-	-	ExbD
BYD3_k127_3306248_16	1237149.C900_03420	2.917e-93	310.0	COG0811@1|root,COG0811@2|Bacteria,4NFIX@976|Bacteroidetes,47N0M@768503|Cytophagia	976|Bacteroidetes	U	PFAM MotA TolQ ExbB proton channel	exbB	-	-	ko:K03561	-	-	-	-	ko00000,ko02000	1.A.30.2.1	-	-	MotA_ExbB
BYD3_k127_3306248_37	1237149.C900_03421	9.272e-44	170.0	COG3087@1|root,COG3087@2|Bacteria,4NVU5@976|Bacteroidetes,47S99@768503|Cytophagia	976|Bacteroidetes	D	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides	-	-	-	-	-	-	-	-	-	-	-	-	SPOR
BYD3_k127_3306248_9	1237149.C900_03422	3.285e-144	476.0	COG4206@1|root,COG4206@2|Bacteria,4NGYD@976|Bacteroidetes,47JSU@768503|Cytophagia	976|Bacteroidetes	H	Psort location OuterMembrane, score	-	-	-	-	-	-	-	-	-	-	-	-	TonB_dep_Rec
BYD3_k127_3306248_1	1237149.C900_03423	5.384e-307	972.0	COG0457@1|root,COG1729@1|root,COG0457@2|Bacteria,COG1729@2|Bacteria,4NE4W@976|Bacteroidetes,47JS4@768503|Cytophagia	976|Bacteroidetes	S	Tetratricopeptide repeat	-	-	-	-	-	-	-	-	-	-	-	-	TPR_16,TPR_2,TPR_21,TPR_6,TPR_8
BYD3_k127_3306248_11	1237149.C900_03424	1.172e-124	407.0	COG1466@1|root,COG1466@2|Bacteria,4NEIB@976|Bacteroidetes,47M1Q@768503|Cytophagia	976|Bacteroidetes	L	TIGRFAM DNA polymerase III, delta subunit	holA	-	2.7.7.7	ko:K02340	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	M00260	R00375,R00376,R00377,R00378	RC02795	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	-	-	-	DNA_pol3_delta
BYD3_k127_3306248_29	1237149.C900_03426	7.854e-60	213.0	COG0705@1|root,COG0705@2|Bacteria,4NGT3@976|Bacteroidetes,47R0S@768503|Cytophagia	976|Bacteroidetes	S	Rhomboid family	-	-	-	-	-	-	-	-	-	-	-	-	Rhomboid
BYD3_k127_3306248_3	1237149.C900_03428	6.34e-224	701.0	COG2204@1|root,COG2204@2|Bacteria,4NE89@976|Bacteroidetes,47NKU@768503|Cytophagia	976|Bacteroidetes	T	Sigma-54 interaction domain	-	-	-	-	-	-	-	-	-	-	-	-	Response_reg,Sigma54_activat
BYD3_k127_3306248_4	1237149.C900_03429	1.888e-213	681.0	COG0642@1|root,COG0642@2|Bacteria,4NJVF@976|Bacteroidetes,47Y2W@768503|Cytophagia	976|Bacteroidetes	T	His Kinase A (phosphoacceptor) domain	-	-	-	-	-	-	-	-	-	-	-	-	HATPase_c,HisKA,Hpt,Reg_prop,Response_reg
BYD3_k127_3306248_33	1237149.C900_04357	2.488e-49	178.0	COG3682@1|root,COG3682@2|Bacteria,4NNVM@976|Bacteroidetes,47Q5Z@768503|Cytophagia	976|Bacteroidetes	K	PFAM Penicillinase repressor	-	-	-	-	-	-	-	-	-	-	-	-	Penicillinase_R
BYD3_k127_3306248_25	1237149.C900_04356	2.979e-67	249.0	COG0810@1|root,COG4219@1|root,COG0810@2|Bacteria,COG4219@2|Bacteria,4NDWS@976|Bacteroidetes,47M7Q@768503|Cytophagia	976|Bacteroidetes	KMT	PFAM BlaR1 peptidase M56	-	-	-	-	-	-	-	-	-	-	-	-	CarbopepD_reg_2,Peptidase_M56,Plug,TonB_C
BYD3_k127_3306248_32	1123248.KB893317_gene4274	7.899e-51	186.0	COG3832@1|root,COG3832@2|Bacteria,4NST9@976|Bacteroidetes,1ISQV@117747|Sphingobacteriia	976|Bacteroidetes	S	PFAM Activator of Hsp90 ATPase	-	-	-	-	-	-	-	-	-	-	-	-	AHSA1
BYD3_k127_3306248_36	1123248.KB893317_gene4273	1.374e-44	164.0	COG0640@1|root,COG0640@2|Bacteria,4NTCN@976|Bacteroidetes,1IYA0@117747|Sphingobacteriia	976|Bacteroidetes	K	regulatory protein, arsR	-	-	-	-	-	-	-	-	-	-	-	-	HTH_20,HTH_5
BYD3_k127_3306248_39	655815.ZPR_1891	5.85e-24	106.0	COG0784@1|root,COG0784@2|Bacteria,4NUT5@976|Bacteroidetes,1I463@117743|Flavobacteriia	976|Bacteroidetes	T	response regulator, receiver	-	-	-	-	-	-	-	-	-	-	-	-	Response_reg
BYD3_k127_3306248_22	760192.Halhy_2201	7.478e-73	254.0	COG0693@1|root,COG0693@2|Bacteria,4NMW8@976|Bacteroidetes,1ITDF@117747|Sphingobacteriia	976|Bacteroidetes	S	COGs COG4977 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain	-	-	4.2.1.103	ko:K18199	ko00930,map00930	-	R05771	RC01467	ko00000,ko00001,ko01000,ko01002	-	-	-	DJ-1_PfpI,YHS
BYD3_k127_3306248_14	1185876.BN8_01450	4.985e-99	338.0	2C34F@1|root,2ZA5Y@2|Bacteria,4NGPA@976|Bacteroidetes,47MYC@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_3306248_42	1120949.KB903322_gene2771	2.548e-10	68.0	2BBWP@1|root,325F2@2|Bacteria,2HAKI@201174|Actinobacteria	201174|Actinobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_3306248_38	1121285.AUFK01000018_gene713	1.229e-37	147.0	COG2350@1|root,COG2350@2|Bacteria,4NR5W@976|Bacteroidetes,1I5PD@117743|Flavobacteriia,3ZURT@59732|Chryseobacterium	976|Bacteroidetes	S	Protein conserved in bacteria	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_3306248_26	760192.Halhy_0882	7.845e-63	226.0	COG2207@1|root,COG2207@2|Bacteria,4NHA5@976|Bacteroidetes,1IWNM@117747|Sphingobacteriia	976|Bacteroidetes	K	helix_turn_helix, arabinose operon control protein	-	-	-	-	-	-	-	-	-	-	-	-	HTH_18
BYD3_k127_3306248_44	471854.Dfer_2354	1.681e-05	48.0	COG3279@1|root,COG3279@2|Bacteria,4NH5N@976|Bacteroidetes,47N4M@768503|Cytophagia	976|Bacteroidetes	K	LytTr DNA-binding domain	-	-	-	-	-	-	-	-	-	-	-	-	LytTR,Response_reg
BYD3_k127_3306248_24	926549.KI421517_gene665	2.485e-68	237.0	COG4430@1|root,COG4430@2|Bacteria,4NNH0@976|Bacteroidetes,47PYG@768503|Cytophagia	976|Bacteroidetes	S	Bacteriocin-protection, YdeI or OmpD-Associated	-	-	-	-	-	-	-	-	-	-	-	-	DUF1801,OmdA
BYD3_k127_3306248_30	1278073.MYSTI_04943	2.504e-56	205.0	COG0596@1|root,COG0596@2|Bacteria,1R4N4@1224|Proteobacteria,434SV@68525|delta/epsilon subdivisions,2WZ3Y@28221|Deltaproteobacteria,2Z19T@29|Myxococcales	28221|Deltaproteobacteria	S	Hydrolase	-	-	-	-	-	-	-	-	-	-	-	-	Abhydrolase_1,Abhydrolase_6
BYD3_k127_3306248_28	1237149.C900_00553	2.799e-60	216.0	COG3637@1|root,COG3637@2|Bacteria,4NN3F@976|Bacteroidetes,47XR1@768503|Cytophagia	976|Bacteroidetes	M	Outer membrane protein beta-barrel domain	-	-	-	-	-	-	-	-	-	-	-	-	OMP_b-brl,OMP_b-brl_2
BYD3_k127_3306248_2	929556.Solca_3818	1.122e-293	913.0	COG0457@1|root,COG2114@1|root,COG5616@1|root,COG0457@2|Bacteria,COG2114@2|Bacteria,COG5616@2|Bacteria,4NFW7@976|Bacteroidetes,1IR3J@117747|Sphingobacteriia	976|Bacteroidetes	K	Tetratricopeptide repeat	-	-	-	-	-	-	-	-	-	-	-	-	Guanylate_cyc,HTH_18,TPR_16,TPR_2,TPR_8
BYD3_k127_3306248_15	471870.BACINT_03054	1.664e-93	316.0	COG0451@1|root,COG0451@2|Bacteria,4PHT4@976|Bacteroidetes,2FNQG@200643|Bacteroidia,4APQW@815|Bacteroidaceae	976|Bacteroidetes	M	COG0451 Nucleoside-diphosphate-sugar	-	-	5.1.3.26	ko:K19997	-	-	-	-	ko00000,ko01000	-	-	-	Epimerase
BYD3_k127_3306248_21	216432.CA2559_02945	1.892e-74	254.0	COG0110@1|root,COG0110@2|Bacteria,4NMZ2@976|Bacteroidetes,1I1H0@117743|Flavobacteriia	976|Bacteroidetes	S	acetyltransferase, isoleucine patch superfamily	wcaF	-	-	ko:K03818	-	-	-	-	ko00000,ko01000	-	-	-	Hexapep
BYD3_k127_3306248_5	926549.KI421517_gene2623	5.808e-154	496.0	COG0438@1|root,COG0438@2|Bacteria,4NI3I@976|Bacteroidetes,47MKE@768503|Cytophagia	976|Bacteroidetes	M	PFAM Glycosyl transferase, group 1	-	-	-	-	-	-	-	-	-	-	-	-	Glyco_trans_4_4,Glyco_transf_4,Glycos_transf_1
BYD3_k127_3306248_8	1123248.KB893325_gene1197	1.368e-146	473.0	COG0438@1|root,COG0438@2|Bacteria,4NJQU@976|Bacteroidetes,1IPJM@117747|Sphingobacteriia	976|Bacteroidetes	M	Glycosyl transferases group 1	-	-	-	-	-	-	-	-	-	-	-	-	Glyco_trans_1_4,Glyco_transf_4,Glycos_transf_1
BYD3_k127_3306248_7	1150600.ADIARSV_3999	9.843e-147	482.0	2ADQ2@1|root,313F9@2|Bacteria,4NI26@976|Bacteroidetes,1IWNY@117747|Sphingobacteriia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_3306248_19	143224.JQMD01000002_gene2561	9.322e-82	282.0	COG2755@1|root,COG2755@2|Bacteria,4NPD5@976|Bacteroidetes,1I7SX@117743|Flavobacteriia	976|Bacteroidetes	E	lipolytic protein G-D-S-L family	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_3306248_20	1150600.ADIARSV_4003	1.351e-80	280.0	COG1215@1|root,COG1215@2|Bacteria	2|Bacteria	M	transferase activity, transferring glycosyl groups	-	-	-	-	-	-	-	-	-	-	-	-	Glyco_tranf_2_5,Glycos_transf_2
BYD3_k127_3306248_17	1150600.ADIARSV_4003	3.021e-87	300.0	COG1215@1|root,COG1215@2|Bacteria	2|Bacteria	M	transferase activity, transferring glycosyl groups	-	-	-	-	-	-	-	-	-	-	-	-	Glyco_tranf_2_5,Glycos_transf_2
BYD3_k127_3306248_31	1150600.ADIARSV_3998	2.299e-55	200.0	COG2244@1|root,COG2244@2|Bacteria,4PK42@976|Bacteroidetes,1IX4X@117747|Sphingobacteriia	976|Bacteroidetes	S	polysaccharide biosynthetic process	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_3314246_0	1166018.FAES_1435	5.434e-58	207.0	2F5F6@1|root,33Y0W@2|Bacteria,4P3AY@976|Bacteroidetes,47V7G@768503|Cytophagia	976|Bacteroidetes	S	Protein of unknown function (DUF664)	-	-	-	-	-	-	-	-	-	-	-	-	DinB_2
BYD3_k127_3314246_1	1185876.BN8_03452	3.617e-35	140.0	COG0790@1|root,COG0790@2|Bacteria,4PPS3@976|Bacteroidetes,47TGJ@768503|Cytophagia	976|Bacteroidetes	S	Protein of unknown function (DUF2911)	-	-	-	-	-	-	-	-	-	-	-	-	DUF2911
BYD3_k127_3360240_27	471854.Dfer_3985	2.697e-64	224.0	COG0591@1|root,COG0591@2|Bacteria,4NEN8@976|Bacteroidetes,47KPI@768503|Cytophagia	976|Bacteroidetes	E	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family	-	-	-	ko:K03307	-	-	-	-	ko00000	2.A.21	-	-	SSF
BYD3_k127_3360240_16	1150600.ADIARSV_0117	9.534e-121	393.0	COG0500@1|root,COG2226@2|Bacteria,4NEUC@976|Bacteroidetes,1IP66@117747|Sphingobacteriia	976|Bacteroidetes	Q	Methylase involved in ubiquinone menaquinone biosynthesis	arsM	-	2.1.1.137	ko:K07755	-	-	-	-	ko00000,ko01000	-	-	-	Methyltransf_11,Methyltransf_31
BYD3_k127_3360240_31	153721.MYP_3341	2.67e-39	148.0	COG0640@1|root,COG0640@2|Bacteria,4NQK3@976|Bacteroidetes,47R2A@768503|Cytophagia	976|Bacteroidetes	K	PFAM Bacterial regulatory protein, arsR family	-	-	-	-	-	-	-	-	-	-	-	-	HTH_20,HTH_5
BYD3_k127_3360240_21	1168034.FH5T_06410	3.309e-84	286.0	COG3279@1|root,COG3279@2|Bacteria,4NGBF@976|Bacteroidetes,2FMKB@200643|Bacteroidia	976|Bacteroidetes	KT	COG3279 Response regulator of the LytR AlgR family	-	-	-	-	-	-	-	-	-	-	-	-	LytTR,Response_reg
BYD3_k127_3360240_24	1408473.JHXO01000005_gene1679	9.073e-78	273.0	COG2972@1|root,COG2972@2|Bacteria,4NFDP@976|Bacteroidetes,2FPUC@200643|Bacteroidia	976|Bacteroidetes	T	Histidine kinase	-	-	-	-	-	-	-	-	-	-	-	-	His_kinase
BYD3_k127_3360240_26	927658.AJUM01000034_gene89	2.006e-70	247.0	2ACWU@1|root,312I8@2|Bacteria,4PHHH@976|Bacteroidetes,2G1D3@200643|Bacteroidia,3XKVE@558415|Marinilabiliaceae	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_3360240_22	880070.Cycma_4443	6.847e-83	281.0	COG2199@1|root,COG3706@2|Bacteria,4NPU1@976|Bacteroidetes	976|Bacteroidetes	T	Psort location Cytoplasmic, score 8.96	-	-	-	-	-	-	-	-	-	-	-	-	CBM9_2
BYD3_k127_3360240_11	880070.Cycma_2270	3.055e-163	522.0	COG1921@1|root,COG1921@2|Bacteria,4NIIG@976|Bacteroidetes,47NJD@768503|Cytophagia	976|Bacteroidetes	E	L-seryl-tRNA selenium transferase	-	-	2.9.1.1	ko:K01042	ko00450,ko00970,map00450,map00970	-	R08219	RC01246	ko00000,ko00001,ko01000	-	-	-	Aminotran_5,SelA
BYD3_k127_3360240_5	1288963.ADIS_4349	1.65e-245	771.0	COG2010@1|root,COG2133@1|root,COG2010@2|Bacteria,COG2133@2|Bacteria,4NDV1@976|Bacteroidetes,47JGM@768503|Cytophagia	976|Bacteroidetes	G	COGs COG2133 Glucose sorbosone dehydrogenase	-	-	-	-	-	-	-	-	-	-	-	-	Cytochrome_CBB3,GSDH
BYD3_k127_3360240_29	929556.Solca_0588	5.226e-43	164.0	COG3506@1|root,COG3506@2|Bacteria,4NKFW@976|Bacteroidetes,1IUQD@117747|Sphingobacteriia	976|Bacteroidetes	S	Protein of unknown function (DUF1349)	-	-	-	ko:K09702	-	-	-	-	ko00000	-	-	-	DUF1349
BYD3_k127_3360240_8	1123278.KB893615_gene5184	1.867e-168	534.0	COG0667@1|root,COG0667@2|Bacteria,4NEDK@976|Bacteroidetes,47KXI@768503|Cytophagia	976|Bacteroidetes	C	PFAM aldo keto reductase	-	-	-	-	-	-	-	-	-	-	-	-	Aldo_ket_red
BYD3_k127_3360240_12	641524.ADICYQ_1797	9.697e-163	524.0	COG3964@1|root,COG3964@2|Bacteria,4NI4W@976|Bacteroidetes,47U1T@768503|Cytophagia	976|Bacteroidetes	S	Amidohydrolase family	-	-	3.5.2.3	ko:K01465	ko00240,ko01100,map00240,map01100	M00051	R01993	RC00632	ko00000,ko00001,ko00002,ko01000	-	-	-	Amidohydro_1
BYD3_k127_3360240_7	1121481.AUAS01000018_gene474	1.949e-195	617.0	COG3964@1|root,COG3964@2|Bacteria,4NI4W@976|Bacteroidetes,47M3B@768503|Cytophagia	976|Bacteroidetes	S	Amidohydrolase family	-	-	3.5.2.3	ko:K01465	ko00240,ko01100,map00240,map01100	M00051	R01993	RC00632	ko00000,ko00001,ko00002,ko01000	-	-	-	Amidohydro_1,Amidohydro_3
BYD3_k127_3360240_6	1121481.AUAS01000004_gene1503	2.001e-240	753.0	COG0520@1|root,COG0520@2|Bacteria,4NI5J@976|Bacteroidetes,47NW7@768503|Cytophagia	976|Bacteroidetes	E	Cys/Met metabolism PLP-dependent enzyme	-	-	-	-	-	-	-	-	-	-	-	-	Aminotran_5
BYD3_k127_3360240_30	1123276.KB893251_gene3599	1.832e-40	160.0	2EBPD@1|root,335PG@2|Bacteria,4NW88@976|Bacteroidetes	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_3360240_18	929703.KE386491_gene3312	1.391e-103	345.0	COG1082@1|root,COG1082@2|Bacteria,4NG1K@976|Bacteroidetes,47JT7@768503|Cytophagia	976|Bacteroidetes	G	Xylose isomerase-like TIM barrel	-	-	-	-	-	-	-	-	-	-	-	-	AP_endonuc_2
BYD3_k127_3360240_15	1237149.C900_05572	1.022e-136	443.0	COG2114@1|root,COG2114@2|Bacteria,4NG5A@976|Bacteroidetes,47QPA@768503|Cytophagia	976|Bacteroidetes	T	Adenylate and Guanylate cyclase catalytic domain	-	-	4.6.1.1	ko:K01768	ko00230,ko02025,ko04113,ko04213,map00230,map02025,map04113,map04213	M00695	R00089,R00434	RC00295	ko00000,ko00001,ko00002,ko01000	-	-	-	Guanylate_cyc
BYD3_k127_3360240_9	1123248.KB893314_gene3562	4.763e-167	535.0	COG1030@1|root,COG1030@2|Bacteria,4NGGV@976|Bacteroidetes,1IPJY@117747|Sphingobacteriia	976|Bacteroidetes	O	NfeD-like C-terminal, partner-binding	-	-	-	ko:K07403	-	-	-	-	ko00000	-	-	-	CLP_protease,NfeD
BYD3_k127_3360240_17	1123248.KB893314_gene3563	3.382e-120	390.0	COG0330@1|root,COG0330@2|Bacteria,4NFPK@976|Bacteroidetes,1IRDU@117747|Sphingobacteriia	976|Bacteroidetes	O	PFAM SPFH domain Band 7 family	-	-	-	-	-	-	-	-	-	-	-	-	Band_7
BYD3_k127_3360240_14	880070.Cycma_4201	2.352e-137	451.0	COG1538@1|root,COG1538@2|Bacteria,4NDZK@976|Bacteroidetes	976|Bacteroidetes	MU	Efflux transporter, outer membrane factor	-	-	-	ko:K18139	ko01501,ko02024,map01501,map02024	M00642,M00643,M00647,M00718,M00768,M00822	-	-	ko00000,ko00001,ko00002,ko01504,ko02000	1.B.17,2.A.6.2	-	-	OEP
BYD3_k127_3360240_13	880070.Cycma_4202	1.977e-142	464.0	COG0845@1|root,COG0845@2|Bacteria,4NF0X@976|Bacteroidetes	976|Bacteroidetes	M	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family	-	-	-	-	-	-	-	-	-	-	-	-	HlyD_3,HlyD_D23
BYD3_k127_3360240_0	641524.ADICYQ_4951	0.0	1600.0	COG0841@1|root,COG0841@2|Bacteria,4NDZG@976|Bacteroidetes,47NPA@768503|Cytophagia	976|Bacteroidetes	V	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family	-	-	-	-	-	-	-	-	-	-	-	-	ACR_tran
BYD3_k127_3360240_1	1492737.FEM08_05370	0.0	1046.0	COG0210@1|root,COG0210@2|Bacteria,4NDWN@976|Bacteroidetes,1HWYD@117743|Flavobacteriia,2NSEZ@237|Flavobacterium	976|Bacteroidetes	L	Helicase	-	-	3.6.4.12	ko:K03657,ko:K03658	ko03420,ko03430,map03420,map03430	-	-	-	ko00000,ko00001,ko01000,ko03400	-	-	-	UvrD-helicase,UvrD_C
BYD3_k127_3360240_4	929703.KE386491_gene1730	1.304e-270	854.0	COG0577@1|root,COG0577@2|Bacteria,4NDUK@976|Bacteroidetes,47MYR@768503|Cytophagia	976|Bacteroidetes	V	MacB-like periplasmic core domain	-	-	-	-	-	-	-	-	-	-	-	-	FtsX,MacB_PCD
BYD3_k127_3360240_2	1237149.C900_01563	0.0	1024.0	COG0577@1|root,COG0577@2|Bacteria,4NDUK@976|Bacteroidetes,47NTJ@768503|Cytophagia	976|Bacteroidetes	V	MacB-like periplasmic core domain	-	-	-	ko:K02004	-	M00258	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	FtsX,MacB_PCD
BYD3_k127_3360240_23	1279009.ADICEAN_01791	1.415e-78	270.0	28JI1@1|root,2Z9BG@2|Bacteria,4NMDW@976|Bacteroidetes,47Q2P@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_3360240_19	406552.NJ7G_2116	8.344e-99	331.0	COG1653@1|root,arCOG00151@2157|Archaea,2Y2AY@28890|Euryarchaeota,23Z4Y@183963|Halobacteria	183963|Halobacteria	G	COG1653 ABC-type sugar transport system, periplasmic component	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_3360240_10	926562.Oweho_1713	1.24e-164	531.0	COG0642@1|root,COG5000@1|root,COG2205@2|Bacteria,COG5000@2|Bacteria	2|Bacteria	T	phosphorelay sensor kinase activity	-	-	-	-	-	-	-	-	-	-	-	-	GAF,GAF_3,HAMP,HATPase_c,HisKA,PAS_8,PAS_9,Response_reg
BYD3_k127_3360240_20	1121904.ARBP01000006_gene3875	8.489e-99	328.0	COG0745@1|root,COG0745@2|Bacteria,4NIQC@976|Bacteroidetes,47PDQ@768503|Cytophagia	976|Bacteroidetes	T	Transcriptional regulatory protein, C terminal	-	-	-	ko:K07667	ko02020,ko02024,map02020,map02024	M00454	-	-	ko00000,ko00001,ko00002,ko02022	-	-	-	Response_reg,Trans_reg_C
BYD3_k127_3360240_25	344747.PM8797T_09229	5.452e-72	252.0	COG1595@1|root,COG1595@2|Bacteria,2IYFG@203682|Planctomycetes	203682|Planctomycetes	K	COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog	-	-	-	-	-	-	-	-	-	-	-	-	Sigma70_r2
BYD3_k127_3360240_28	1237149.C900_01840	2.389e-43	162.0	COG4319@1|root,COG4319@2|Bacteria,4P78S@976|Bacteroidetes	976|Bacteroidetes	S	Domain of unknown function (DUF4440)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4440
BYD3_k127_3360240_3	616991.JPOO01000001_gene3939	1.73e-311	970.0	COG2091@1|root,COG2091@2|Bacteria,4NFQ6@976|Bacteroidetes,1HX4Y@117743|Flavobacteriia	976|Bacteroidetes	H	lysine biosynthetic process via aminoadipic acid	-	-	-	-	-	-	-	-	-	-	-	-	CBM9_1
BYD3_k127_3360240_32	935261.JAGL01000034_gene3862	8.425e-13	72.0	COG5470@1|root,COG5470@2|Bacteria,1N7JA@1224|Proteobacteria,2UBQW@28211|Alphaproteobacteria,43RMS@69277|Phyllobacteriaceae	28211|Alphaproteobacteria	S	Domain of unknown function (DUF1330)	MA20_24570	-	-	-	-	-	-	-	-	-	-	-	DUF1330
BYD3_k127_3360240_33	929556.Solca_0465	7.846e-11	64.0	COG2318@1|root,COG2318@2|Bacteria,4NRSP@976|Bacteroidetes,1IYQJ@117747|Sphingobacteriia	976|Bacteroidetes	S	DinB family	-	-	-	-	-	-	-	-	-	-	-	-	DinB
BYD3_k127_337131_2	471854.Dfer_0119	3.739e-57	209.0	COG0662@1|root,COG0662@2|Bacteria,4NPEE@976|Bacteroidetes,47Y5F@768503|Cytophagia	976|Bacteroidetes	G	Cupin domain	-	-	-	-	-	-	-	-	-	-	-	-	Cupin_2
BYD3_k127_337131_5	1121895.Q765_17630	1.56e-25	112.0	2DTJJ@1|root,33KNE@2|Bacteria,4NYVC@976|Bacteroidetes,1I6I8@117743|Flavobacteriia	976|Bacteroidetes	S	Domain of unknown function (DUF1772)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1772
BYD3_k127_337131_3	1121481.AUAS01000004_gene1370	2.385e-43	166.0	COG1309@1|root,COG1309@2|Bacteria,4NWG5@976|Bacteroidetes,47SV5@768503|Cytophagia	976|Bacteroidetes	K	Bacterial transcriptional repressor	-	-	-	-	-	-	-	-	-	-	-	-	TetR,TetR_N
BYD3_k127_337131_1	929562.Emtol_3171	5.863e-97	326.0	COG0657@1|root,COG0657@2|Bacteria,4NIQ0@976|Bacteroidetes,47JK6@768503|Cytophagia	976|Bacteroidetes	I	alpha/beta hydrolase fold	-	-	-	-	-	-	-	-	-	-	-	-	Abhydrolase_3,Peptidase_S9
BYD3_k127_337131_0	1305737.JAFX01000001_gene2475	5.25e-195	626.0	COG2866@1|root,COG2866@2|Bacteria,4NF5T@976|Bacteroidetes,47M7Z@768503|Cytophagia	976|Bacteroidetes	E	Zinc carboxypeptidase	-	-	-	-	-	-	-	-	-	-	-	-	Peptidase_M14
BYD3_k127_337131_4	1233951.IO90_09520	1.284e-27	117.0	2A9A2@1|root,30YEZ@2|Bacteria,4NW1Z@976|Bacteroidetes,1IC4Q@117743|Flavobacteriia,3HJ3E@358033|Chryseobacterium	976|Bacteroidetes	S	DoxX-like family	-	-	-	-	-	-	-	-	-	-	-	-	DoxX_2
BYD3_k127_3418284_8	1123248.KB893326_gene1435	2.982e-41	155.0	COG2843@1|root,COG2843@2|Bacteria,4NI9W@976|Bacteroidetes,1J0CU@117747|Sphingobacteriia	976|Bacteroidetes	M	Bacterial capsule synthesis protein PGA_cap	-	-	-	ko:K07282	-	-	-	-	ko00000	-	-	-	PGA_cap
BYD3_k127_3418284_5	1237149.C900_02420	7.661e-83	280.0	COG1926@1|root,COG1926@2|Bacteria,4NRU7@976|Bacteroidetes,47QIG@768503|Cytophagia	976|Bacteroidetes	S	Phosphoribosyl transferase domain	-	-	-	ko:K07100	-	-	-	-	ko00000	-	-	-	Pribosyltran
BYD3_k127_3418284_3	1237149.C900_02421	7.507e-124	406.0	COG2187@1|root,COG2187@2|Bacteria,4P2MP@976|Bacteroidetes,47UQI@768503|Cytophagia	976|Bacteroidetes	S	AAA domain	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_3418284_2	1237149.C900_02422	9.547e-140	451.0	COG0462@1|root,COG0462@2|Bacteria,4NJ7E@976|Bacteroidetes,47UHS@768503|Cytophagia	976|Bacteroidetes	EF	Phosphoribosyl synthetase-associated domain	-	-	2.7.6.1	ko:K00948	ko00030,ko00230,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00230,map01100,map01110,map01120,map01130,map01200,map01230	M00005	R01049	RC00002,RC00078	ko00000,ko00001,ko00002,ko01000	-	-	-	Pribosyl_synth,Pribosyltran_N
BYD3_k127_3418284_1	1123248.KB893316_gene4614	1.154e-189	601.0	COG2312@1|root,COG2312@2|Bacteria,4NF9R@976|Bacteroidetes,1IV2U@117747|Sphingobacteriia	976|Bacteroidetes	S	Erythromycin esterase	-	-	-	ko:K06880	-	-	-	-	ko00000,ko01000,ko01504	-	-	-	Erythro_esteras
BYD3_k127_3418284_4	1237149.C900_03081	7.952e-88	294.0	COG0500@1|root,COG2226@2|Bacteria,4NPPQ@976|Bacteroidetes,47VKM@768503|Cytophagia	976|Bacteroidetes	Q	Methyltransferase domain	-	-	-	-	-	-	-	-	-	-	-	-	Methyltransf_11,Methyltransf_23
BYD3_k127_3418284_7	1237149.C900_02150	5.734e-50	181.0	COG0071@1|root,COG0071@2|Bacteria,4NQXY@976|Bacteroidetes,47R7Q@768503|Cytophagia	976|Bacteroidetes	O	Belongs to the small heat shock protein (HSP20) family	-	-	-	ko:K13993	ko04141,map04141	-	-	-	ko00000,ko00001,ko03110	-	-	-	HSP20
BYD3_k127_3418284_9	1237149.C900_03825	1.724e-39	153.0	COG3685@1|root,COG3685@2|Bacteria	2|Bacteria	S	cellular response to DNA damage stimulus	yciF	GO:0006950,GO:0006974,GO:0008150,GO:0009987,GO:0033554,GO:0050896,GO:0051716	-	-	-	-	-	-	-	-	-	-	DUF892
BYD3_k127_3418284_10	1123057.P872_20480	2.026e-30	125.0	COG5502@1|root,COG5502@2|Bacteria,4NN8N@976|Bacteroidetes,47W5C@768503|Cytophagia	976|Bacteroidetes	S	Uncharacterized conserved protein (DUF2267)	-	-	-	-	-	-	-	-	-	-	-	-	DUF2267
BYD3_k127_3418284_12	1237149.C900_02153	5.994e-19	89.0	COG1544@1|root,COG1544@2|Bacteria	2|Bacteria	J	regulation of translation	hpf	-	-	ko:K03733,ko:K05808,ko:K05809	-	-	-	-	ko00000,ko03009,ko03036	-	-	-	Ribosom_S30AE_C,Ribosomal_S30AE
BYD3_k127_3418284_11	1120965.AUBV01000010_gene2847	1.94e-19	98.0	COG0589@1|root,COG0589@2|Bacteria,4NHBB@976|Bacteroidetes,47XGM@768503|Cytophagia	976|Bacteroidetes	T	Universal stress protein family	uspA	-	-	-	-	-	-	-	-	-	-	-	DUF2007,Usp
BYD3_k127_3418284_0	1237149.C900_03824	1.451e-199	635.0	COG1283@1|root,COG1283@2|Bacteria,4NHMY@976|Bacteroidetes,47NEB@768503|Cytophagia	976|Bacteroidetes	P	Na+/Pi-cotransporter	-	-	-	ko:K03324	-	-	-	-	ko00000,ko02000	2.A.58.2	-	-	Na_Pi_cotrans
BYD3_k127_3418284_6	1237149.C900_00541	7.935e-51	192.0	COG0589@1|root,COG0589@2|Bacteria,4NFZ5@976|Bacteroidetes,47PIA@768503|Cytophagia	976|Bacteroidetes	T	Universal stress protein	-	-	-	-	-	-	-	-	-	-	-	-	Usp
BYD3_k127_342679_17	1123278.KB893614_gene5278	4.504e-145	475.0	COG0793@1|root,COG0793@2|Bacteria,4NGGJ@976|Bacteroidetes,47R1W@768503|Cytophagia	976|Bacteroidetes	M	Peptidase family S41	-	-	-	-	-	-	-	-	-	-	-	-	Peptidase_S41
BYD3_k127_342679_29	296591.Bpro_2645	2.989e-94	315.0	COG0500@1|root,COG2226@2|Bacteria,1MVXN@1224|Proteobacteria,2VQVG@28216|Betaproteobacteria,4AFGR@80864|Comamonadaceae	28216|Betaproteobacteria	Q	Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT)	arsM	-	2.1.1.137	ko:K07755	-	-	-	-	ko00000,ko01000	-	-	-	Methyltransf_31
BYD3_k127_342679_49	1120973.AQXL01000121_gene96	1.4e-21	102.0	COG0526@1|root,COG0526@2|Bacteria,1VAPY@1239|Firmicutes,4HIQ3@91061|Bacilli,27ANI@186823|Alicyclobacillaceae	91061|Bacilli	CO	Glutathione peroxidase	resA	-	-	-	-	-	-	-	-	-	-	-	AhpC-TSA
BYD3_k127_342679_53	1340493.JNIF01000003_gene4260	2.67e-12	72.0	COG4233@1|root,COG4233@2|Bacteria	2|Bacteria	CO	Disulphide bond corrector protein DsbC	dsbD	-	1.8.1.8	ko:K04084,ko:K06888	-	-	-	-	ko00000,ko01000,ko03110	5.A.1.1	-	-	DsbC,DsbD,Thioredoxin_7
BYD3_k127_342679_33	929704.Myrod_0469	3.771e-73	252.0	COG0607@1|root,COG0640@1|root,COG0607@2|Bacteria,COG0640@2|Bacteria,4NNU0@976|Bacteroidetes,1I2KC@117743|Flavobacteriia	976|Bacteroidetes	KP	helix_turn_helix, Arsenical Resistance Operon Repressor	-	-	-	-	-	-	-	-	-	-	-	-	HTH_20,HTH_5,Rhodanese
BYD3_k127_342679_24	1218108.KB908298_gene3562	1.16e-120	399.0	COG0491@1|root,COG0607@1|root,COG0491@2|Bacteria,COG0607@2|Bacteria,4NKJ6@976|Bacteroidetes,1I1VH@117743|Flavobacteriia	976|Bacteroidetes	P	Metallo-beta-lactamase superfamily	-	-	-	-	-	-	-	-	-	-	-	-	Lactamase_B,Rhodanese
BYD3_k127_342679_11	866536.Belba_1137	1.729e-186	590.0	COG0477@1|root,COG2814@2|Bacteria,4NEN9@976|Bacteroidetes,47KR8@768503|Cytophagia	976|Bacteroidetes	EGP	Major Facilitator Superfamily	-	-	-	-	-	-	-	-	-	-	-	-	MFS_1
BYD3_k127_342679_30	1123278.KB893393_gene5611	3.504e-92	309.0	COG2820@1|root,COG2820@2|Bacteria	2|Bacteria	F	uridine phosphorylase activity	-	-	2.4.2.3	ko:K00757	ko00240,ko00983,ko01100,map00240,map00983,map01100	-	R01876,R02484,R08229	RC00063	ko00000,ko00001,ko01000	-	-	-	PNP_UDP_1
BYD3_k127_342679_19	1279009.ADICEAN_03840	1.305e-136	439.0	COG3000@1|root,COG3000@2|Bacteria,4NEYE@976|Bacteroidetes,47N4V@768503|Cytophagia	976|Bacteroidetes	I	PFAM Fatty acid hydroxylase superfamily	-	-	-	-	-	-	-	-	-	-	-	-	FA_hydroxylase
BYD3_k127_342679_4	471854.Dfer_5545	1.004e-255	811.0	COG0577@1|root,COG0577@2|Bacteria,4NDUK@976|Bacteroidetes,47JJN@768503|Cytophagia	976|Bacteroidetes	V	FtsX-like permease family	-	-	-	-	-	-	-	-	-	-	-	-	FtsX,MacB_PCD
BYD3_k127_342679_54	1202532.FF52_15364	1.044e-11	67.0	COG3967@1|root,COG3967@2|Bacteria,4NJDN@976|Bacteroidetes,1I3AJ@117743|Flavobacteriia,2P0FC@237|Flavobacterium	976|Bacteroidetes	M	Belongs to the short-chain dehydrogenases reductases (SDR) family	-	-	-	ko:K14189	-	-	-	-	ko00000,ko01000	-	-	-	adh_short
BYD3_k127_342679_42	1123277.KB893195_gene5619	5.666e-46	169.0	COG3631@1|root,COG3631@2|Bacteria,4NPEK@976|Bacteroidetes	976|Bacteroidetes	S	Ketosteroid isomerase-related protein	-	-	-	-	-	-	-	-	-	-	-	-	SnoaL,SnoaL_2
BYD3_k127_342679_18	926549.KI421517_gene714	4.875e-139	451.0	COG0584@1|root,COG0584@2|Bacteria,4NMGN@976|Bacteroidetes,47NRY@768503|Cytophagia	976|Bacteroidetes	C	PFAM Glycerophosphoryl diester phosphodiesterase	-	-	3.1.4.46	ko:K01126	ko00564,map00564	-	R01030,R01470	RC00017,RC00425	ko00000,ko00001,ko01000	-	-	-	GDPD
BYD3_k127_342679_48	883126.HMPREF9710_00863	3.844e-32	129.0	2CK8Q@1|root,31PVK@2|Bacteria,1RIRH@1224|Proteobacteria,2VUMH@28216|Betaproteobacteria	28216|Betaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_342679_44	471854.Dfer_0113	4.675e-41	156.0	2AE1C@1|root,313U2@2|Bacteria,4NPTV@976|Bacteroidetes,47V6Y@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_342679_27	1185876.BN8_03075	1.324e-100	342.0	COG4948@1|root,COG4948@2|Bacteria,4NKDF@976|Bacteroidetes,47U6R@768503|Cytophagia	976|Bacteroidetes	M	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain	-	-	-	-	-	-	-	-	-	-	-	-	MR_MLE_C
BYD3_k127_342679_34	1237149.C900_02503	3.121e-67	236.0	COG1234@1|root,COG1234@2|Bacteria,4P3FZ@976|Bacteroidetes	976|Bacteroidetes	S	Metallo-beta-lactamase superfamily	-	-	-	-	-	-	-	-	-	-	-	-	Lactamase_B_2
BYD3_k127_342679_39	1107311.Q767_14675	2.97e-54	197.0	COG0702@1|root,COG0702@2|Bacteria,4NMI5@976|Bacteroidetes,1IJ1D@117743|Flavobacteriia	976|Bacteroidetes	GM	NmrA-like family	-	-	-	-	-	-	-	-	-	-	-	-	NAD_binding_10
BYD3_k127_342679_40	485918.Cpin_5858	6.186e-51	185.0	COG1881@1|root,COG1881@2|Bacteria,4NH14@976|Bacteroidetes	976|Bacteroidetes	S	TIGRFAM Raf kinase inhibitor-like protein, YbhB YbcL family	-	-	-	ko:K06910	-	-	-	-	ko00000	-	-	-	PBP
BYD3_k127_342679_36	118163.Ple7327_3335	6.125e-63	222.0	COG0235@1|root,COG0235@2|Bacteria,1G59N@1117|Cyanobacteria,3VMQZ@52604|Pleurocapsales	1117|Cyanobacteria	G	Class II Aldolase and Adducin N-terminal domain	-	-	-	-	-	-	-	-	-	-	-	-	Aldolase_II
BYD3_k127_342679_15	670487.Ocepr_0368	1.069e-153	493.0	COG0182@1|root,COG0182@2|Bacteria,1WI3U@1297|Deinococcus-Thermus	2|Bacteria	E	Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P)	mtnA	GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0006082,GO:0006520,GO:0006555,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009066,GO:0009067,GO:0009086,GO:0009987,GO:0016053,GO:0016853,GO:0016860,GO:0016861,GO:0017144,GO:0019509,GO:0019752,GO:0043094,GO:0043102,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0046394,GO:0046523,GO:0071265,GO:0071267,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607	5.3.1.23	ko:K08963	ko00270,ko01100,map00270,map01100	M00034	R04420	RC01151	ko00000,ko00001,ko00002,ko01000	-	-	-	IF-2B
BYD3_k127_342679_45	1270196.JCKI01000004_gene1143	1.675e-38	145.0	COG3118@1|root,COG3118@2|Bacteria,4NS6N@976|Bacteroidetes,1J0R1@117747|Sphingobacteriia	976|Bacteroidetes	O	Thioredoxin-like domain	-	-	-	ko:K03671	ko04621,ko05418,map04621,map05418	-	-	-	ko00000,ko00001,ko03110	-	-	-	Thioredoxin
BYD3_k127_342679_43	929562.Emtol_0586	1.274e-44	163.0	COG0607@1|root,COG0607@2|Bacteria,4NSD1@976|Bacteroidetes,47R62@768503|Cytophagia	976|Bacteroidetes	P	PFAM Rhodanese-like domain	-	-	-	-	-	-	-	-	-	-	-	-	Rhodanese
BYD3_k127_342679_52	643867.Ftrac_2337	5.793e-20	91.0	2DI4K@1|root,3020V@2|Bacteria,4NV1J@976|Bacteroidetes,47S4A@768503|Cytophagia	976|Bacteroidetes	S	Protein of unknown function (DUF2892)	-	-	-	-	-	-	-	-	-	-	-	-	DUF2892
BYD3_k127_342679_51	1168034.FH5T_20200	3.763e-21	94.0	COG0607@1|root,31225@2|Bacteria,4PGX1@976|Bacteroidetes,2FW1F@200643|Bacteroidia	976|Bacteroidetes	P	Protein of unknown function (DUF2892)	-	-	-	-	-	-	-	-	-	-	-	-	DUF2892
BYD3_k127_342679_50	700598.Niako_0840	1.703e-21	98.0	2DZT3@1|root,32VI6@2|Bacteria,4NSPZ@976|Bacteroidetes	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_342679_0	714943.Mucpa_1942	0.0	1624.0	COG0841@1|root,COG0841@2|Bacteria,4NDZG@976|Bacteroidetes,1IPSY@117747|Sphingobacteriia	976|Bacteroidetes	V	Protein export membrane protein	-	-	-	-	-	-	-	-	-	-	-	-	ACR_tran
BYD3_k127_342679_25	1150600.ADIARSV_3460	4.996e-112	372.0	COG0845@1|root,COG0845@2|Bacteria,4NF23@976|Bacteroidetes,1IU9I@117747|Sphingobacteriia	976|Bacteroidetes	M	Biotin-lipoyl like	-	-	-	-	-	-	-	-	-	-	-	-	HlyD_D23
BYD3_k127_342679_21	1150600.ADIARSV_3461	2.145e-131	432.0	COG1538@1|root,COG1538@2|Bacteria,4NE4S@976|Bacteroidetes,1IR82@117747|Sphingobacteriia	976|Bacteroidetes	MU	Outer membrane efflux protein	-	-	-	-	-	-	-	-	-	-	-	-	OEP
BYD3_k127_342679_38	1123057.P872_21225	2.631e-62	221.0	COG3047@1|root,COG3047@2|Bacteria,4NQHT@976|Bacteroidetes	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	OMP_b-brl
BYD3_k127_342679_22	1123248.KB893386_gene1916	4.749e-126	413.0	COG0845@1|root,COG0845@2|Bacteria,4NITE@976|Bacteroidetes,1ISHH@117747|Sphingobacteriia	976|Bacteroidetes	M	SPTR Efflux transporter, RND family, MFP subunit	-	-	-	ko:K02005	-	-	-	-	ko00000	-	-	-	HlyD_3,HlyD_D23
BYD3_k127_342679_12	925409.KI911562_gene1768	2.366e-184	585.0	COG4591@1|root,COG4591@2|Bacteria,4NHBR@976|Bacteroidetes,1IRPD@117747|Sphingobacteriia	976|Bacteroidetes	M	COGs COG4591 ABC-type transport system involved in lipoprotein release permease component	lolC	-	-	ko:K09808	ko02010,map02010	M00255	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.125	-	-	FtsX,MacB_PCD
BYD3_k127_342679_28	925409.KI911562_gene1767	1.659e-96	320.0	COG1136@1|root,COG1136@2|Bacteria,4NFCG@976|Bacteroidetes,1IQMZ@117747|Sphingobacteriia	976|Bacteroidetes	V	ATPases associated with a variety of cellular activities	-	-	-	ko:K09810	ko02010,map02010	M00255	-	-	ko00000,ko00001,ko00002,ko01000,ko02000	3.A.1.125	-	-	ABC_tran
BYD3_k127_342679_31	1237149.C900_04656	1.162e-89	307.0	COG4188@1|root,COG4188@2|Bacteria,4NHAZ@976|Bacteroidetes,47MNK@768503|Cytophagia	976|Bacteroidetes	S	Platelet-activating factor acetylhydrolase, isoform II	-	-	-	-	-	-	-	-	-	-	-	-	PAF-AH_p_II
BYD3_k127_342679_47	1121287.AUMU01000003_gene2800	2.147e-34	143.0	COG2207@1|root,COG2207@2|Bacteria,4NHA5@976|Bacteroidetes,1I053@117743|Flavobacteriia,3ZUEU@59732|Chryseobacterium	976|Bacteroidetes	K	helix_turn_helix, arabinose operon control protein	-	-	-	-	-	-	-	-	-	-	-	-	HTH_18
BYD3_k127_342679_55	443218.AS9A_2127	0.0001088	51.0	COG0346@1|root,COG0346@2|Bacteria,2ISP0@201174|Actinobacteria	201174|Actinobacteria	E	Glyoxalase-like domain	-	-	4.4.1.5	ko:K01759	ko00620,map00620	-	R02530	RC00004,RC00740	ko00000,ko00001,ko01000	-	-	-	Glyoxalase,Glyoxalase_2
BYD3_k127_342679_3	761193.Runsl_2734	2.901e-312	972.0	COG3292@1|root,COG3292@2|Bacteria,4NE4U@976|Bacteroidetes,47JHS@768503|Cytophagia	976|Bacteroidetes	T	Two component regulator propeller	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_342679_16	1121904.ARBP01000043_gene2122	2.037e-145	470.0	COG4299@1|root,COG4299@2|Bacteria,4NDZF@976|Bacteroidetes,47JVV@768503|Cytophagia	976|Bacteroidetes	S	Protein of unknown function (DUF1624)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1624,DUF5009
BYD3_k127_342679_2	504472.Slin_6586	0.0	1092.0	COG3525@1|root,COG3525@2|Bacteria,4NE08@976|Bacteroidetes,47JFD@768503|Cytophagia	976|Bacteroidetes	G	PFAM Glycoside hydrolase, family 20, catalytic core	-	-	3.2.1.52	ko:K12373	ko00511,ko00513,ko00520,ko00531,ko00603,ko00604,ko01100,ko04142,map00511,map00513,map00520,map00531,map00603,map00604,map01100,map04142	M00079	R00022,R06004,R11316	RC00049	ko00000,ko00001,ko00002,ko01000,ko03110	-	GH20	-	CHB_HEX,CHB_HEX_C,Glyco_hydro_20,Glyco_hydro_20b
BYD3_k127_342679_26	1123277.KB893244_gene5160	1.961e-105	349.0	COG1940@1|root,COG1940@2|Bacteria,4NJ71@976|Bacteroidetes,47MF1@768503|Cytophagia	976|Bacteroidetes	GK	PFAM ROK family	-	-	2.7.1.2	ko:K00845	ko00010,ko00052,ko00500,ko00520,ko00521,ko00524,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00052,map00500,map00520,map00521,map00524,map01100,map01110,map01120,map01130,map01200	M00001,M00549	R00299,R01600,R01786	RC00002,RC00017	ko00000,ko00001,ko00002,ko01000	-	-	-	ROK
BYD3_k127_342679_1	761193.Runsl_2739	0.0	1459.0	COG4206@1|root,COG4774@1|root,COG4206@2|Bacteria,COG4774@2|Bacteria,4NZWU@976|Bacteroidetes	976|Bacteroidetes	H	TonB-linked outer membrane protein, SusC RagA family	-	-	-	-	-	-	-	-	-	-	-	-	CarbopepD_reg_2,Plug,STN,TonB_dep_Rec
BYD3_k127_342679_5	761193.Runsl_2740	2.716e-214	679.0	COG0521@1|root,COG4198@1|root,COG0521@2|Bacteria,COG4198@2|Bacteria,4NEQC@976|Bacteroidetes,47N95@768503|Cytophagia	976|Bacteroidetes	H	Starch-binding associating with outer membrane	-	-	-	-	-	-	-	-	-	-	-	-	SusD-like_2
BYD3_k127_342679_8	1121904.ARBP01000018_gene2701	1.278e-199	630.0	COG1409@1|root,COG1409@2|Bacteria,4NEYU@976|Bacteroidetes,47KM8@768503|Cytophagia	976|Bacteroidetes	S	PFAM metallophosphoesterase	-	-	-	-	-	-	-	-	-	-	-	-	Metallophos,Pur_ac_phosph_N
BYD3_k127_342679_23	700598.Niako_0932	1.677e-122	403.0	COG0329@1|root,COG0329@2|Bacteria,4NFCZ@976|Bacteroidetes,1IR3S@117747|Sphingobacteriia	976|Bacteroidetes	EM	Belongs to the DapA family	-	-	4.3.3.7	ko:K01714	ko00261,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00261,map00300,map01100,map01110,map01120,map01130,map01230	M00016,M00525,M00526,M00527	R10147	RC03062,RC03063	ko00000,ko00001,ko00002,ko01000	-	-	-	DHDPS
BYD3_k127_342679_7	504472.Slin_6614	1.169e-203	642.0	COG4287@1|root,COG4287@2|Bacteria,4NI0U@976|Bacteroidetes,47KB9@768503|Cytophagia	976|Bacteroidetes	S	PhoPQ-activated pathogenicity-related protein	-	-	-	-	-	-	-	-	-	-	-	-	PhoPQ_related
BYD3_k127_342679_32	471854.Dfer_3215	1.575e-85	291.0	COG0584@1|root,COG0584@2|Bacteria,4NGNU@976|Bacteroidetes,47PD9@768503|Cytophagia	976|Bacteroidetes	C	PFAM Glycerophosphoryl diester phosphodiesterase	-	-	3.1.4.46	ko:K01126	ko00564,map00564	-	R01030,R01470	RC00017,RC00425	ko00000,ko00001,ko01000	-	-	-	DUF4996,GDPD,PKD
BYD3_k127_342679_9	1121904.ARBP01000018_gene2704	2.291e-189	601.0	COG4409@1|root,COG4409@2|Bacteria,4NIJX@976|Bacteroidetes,47MH2@768503|Cytophagia	976|Bacteroidetes	G	BNR repeat-like domain	-	-	-	-	-	-	-	-	-	-	-	-	BNR_2
BYD3_k127_342679_20	1121904.ARBP01000013_gene303	3.378e-134	439.0	28KPG@1|root,2ZA7K@2|Bacteria,4NFWJ@976|Bacteroidetes,47MDA@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_342679_46	1226325.HMPREF1548_06016	4.967e-38	155.0	COG0673@1|root,COG0673@2|Bacteria,1TSCE@1239|Firmicutes,24BFP@186801|Clostridia,36WM9@31979|Clostridiaceae	186801|Clostridia	S	Oxidoreductase family, NAD-binding Rossmann fold	-	-	-	-	-	-	-	-	-	-	-	-	GFO_IDH_MocA,GFO_IDH_MocA_C
BYD3_k127_342679_6	1121904.ARBP01000060_gene1915	2.815e-209	655.0	COG0399@1|root,COG0399@2|Bacteria,4NE4B@976|Bacteroidetes,47M1Z@768503|Cytophagia	976|Bacteroidetes	E	DegT/DnrJ/EryC1/StrS aminotransferase family	-	-	-	-	-	-	-	-	-	-	-	-	DegT_DnrJ_EryC1
BYD3_k127_342679_10	1434325.AZQN01000006_gene3334	8.489e-187	590.0	COG1609@1|root,COG4977@1|root,COG1609@2|Bacteria,COG4977@2|Bacteria,4NGPU@976|Bacteroidetes,47MD7@768503|Cytophagia	976|Bacteroidetes	K	Transcriptional regulator, AraC family	-	-	-	ko:K02529	-	-	-	-	ko00000,ko03000	-	-	-	HTH_18,Peripla_BP_3
BYD3_k127_342679_37	1267211.KI669560_gene1067	2.195e-62	227.0	COG0329@1|root,COG0329@2|Bacteria,4NHBA@976|Bacteroidetes,1IR29@117747|Sphingobacteriia	976|Bacteroidetes	EM	Belongs to the DapA family	-	-	4.1.3.3,4.2.1.41,4.3.3.7	ko:K01639,ko:K01707,ko:K01714	ko00053,ko00261,ko00300,ko00520,ko01100,ko01110,ko01120,ko01130,ko01230,map00053,map00261,map00300,map00520,map01100,map01110,map01120,map01130,map01230	M00016,M00525,M00526,M00527	R01811,R02279,R10147	RC00159,RC00600,RC00678,RC03062,RC03063	ko00000,ko00001,ko00002,ko01000	-	-	-	DHDPS
BYD3_k127_342679_35	1123278.KB893455_gene769	1.75e-64	231.0	COG4977@1|root,COG4977@2|Bacteria,4PKXD@976|Bacteroidetes,47Y72@768503|Cytophagia	976|Bacteroidetes	K	AraC-like ligand binding domain	-	-	-	-	-	-	-	-	-	-	-	-	AraC_binding,HTH_AraC
BYD3_k127_342679_14	1121481.AUAS01000008_gene3004	1.839e-172	550.0	COG0738@1|root,COG0738@2|Bacteria,4NEB2@976|Bacteroidetes,47KY1@768503|Cytophagia	976|Bacteroidetes	G	PFAM Major Facilitator Superfamily	-	-	-	-	-	-	-	-	-	-	-	-	MFS_1
BYD3_k127_342679_13	471854.Dfer_3985	1.24e-178	565.0	COG0591@1|root,COG0591@2|Bacteria,4NEN8@976|Bacteroidetes,47KPI@768503|Cytophagia	976|Bacteroidetes	E	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family	-	-	-	ko:K03307	-	-	-	-	ko00000	2.A.21	-	-	SSF
BYD3_k127_3438056_3	1237149.C900_04001	1.334e-93	313.0	COG0204@1|root,COG0204@2|Bacteria,4NG5R@976|Bacteroidetes,47JI7@768503|Cytophagia	976|Bacteroidetes	I	TIGRFAM 1-acyl-sn-glycerol-3-phosphate acyltransferases	plsC	-	2.3.1.51	ko:K00655	ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110	M00089	R02241,R09381	RC00004,RC00037,RC00039	ko00000,ko00001,ko00002,ko01000,ko01004	-	-	-	Acyltransferase
BYD3_k127_3438056_1	1270196.JCKI01000003_gene2230	1.79e-146	476.0	COG3004@1|root,COG3004@2|Bacteria,4NFC4@976|Bacteroidetes,1INUT@117747|Sphingobacteriia	976|Bacteroidetes	P	) H( ) antiporter that extrudes sodium in exchange for external protons	nhaA	-	-	ko:K03313	-	-	-	-	ko00000,ko02000	2.A.33.1	-	-	Na_H_antiport_1
BYD3_k127_3438056_0	1237149.C900_03999	5.617e-201	660.0	COG0457@1|root,COG0457@2|Bacteria,4NGQ7@976|Bacteroidetes,47KHQ@768503|Cytophagia	976|Bacteroidetes	U	Tetratricopeptide repeat	-	-	-	-	-	-	-	-	-	-	-	-	TPR_2,TPR_8
BYD3_k127_3438056_9	700598.Niako_5254	1.572e-50	184.0	COG2940@1|root,COG2940@2|Bacteria,4NQ3D@976|Bacteroidetes	976|Bacteroidetes	S	SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain	-	-	-	ko:K07117	-	-	-	-	ko00000	-	-	-	SET
BYD3_k127_3438056_5	1121285.AUFK01000001_gene2008	2.442e-68	240.0	COG3595@1|root,COG3595@2|Bacteria,4NT4J@976|Bacteroidetes,1I4N5@117743|Flavobacteriia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_3438056_7	1218108.KB908302_gene2742	3.629e-62	223.0	COG3595@1|root,COG3595@2|Bacteria,4NKSN@976|Bacteroidetes,1I2JR@117743|Flavobacteriia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	DUF4097
BYD3_k127_3438056_4	1233951.IO90_14015	9.836e-75	260.0	COG3595@1|root,COG3595@2|Bacteria,4NKSN@976|Bacteroidetes,1I2JR@117743|Flavobacteriia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	DUF4097
BYD3_k127_3438056_10	1237149.C900_05478	1.454e-41	162.0	COG1413@1|root,COG1413@2|Bacteria,4NY24@976|Bacteroidetes	976|Bacteroidetes	C	lyase activity	-	-	-	-	-	-	-	-	-	-	-	-	HEAT_2
BYD3_k127_3438056_8	1237149.C900_05477	1.684e-57	205.0	COG1595@1|root,COG1595@2|Bacteria,4NMYQ@976|Bacteroidetes,47PII@768503|Cytophagia	976|Bacteroidetes	K	TIGRFAM RNA polymerase sigma factor, sigma-70 family	-	-	-	ko:K03088	-	-	-	-	ko00000,ko03021	-	-	-	Sigma70_r2,Sigma70_r4_2
BYD3_k127_3438056_12	1434325.AZQN01000003_gene1982	8.678e-18	93.0	COG2968@1|root,COG2968@2|Bacteria,4NQGC@976|Bacteroidetes,47QHN@768503|Cytophagia	976|Bacteroidetes	S	Protein of unknown function (DUF541)	-	-	-	ko:K09807	-	-	-	-	ko00000	-	-	-	SIMPL
BYD3_k127_3438056_2	926556.Echvi_3936	8.467e-141	454.0	COG1052@1|root,COG1052@2|Bacteria,4NF1R@976|Bacteroidetes,47KBU@768503|Cytophagia	976|Bacteroidetes	CH	D-isomer specific 2-hydroxyacid dehydrogenase	ldhA	-	1.1.1.28	ko:K03778	ko00620,ko01120,map00620,map01120	-	R00704	RC00044	ko00000,ko00001,ko01000	-	-	-	2-Hacid_dh,2-Hacid_dh_C
BYD3_k127_3438056_11	1506583.JQJY01000004_gene3017	8.376e-18	83.0	COG1943@1|root,COG1943@2|Bacteria,4NQTF@976|Bacteroidetes,1I250@117743|Flavobacteriia,2P0IC@237|Flavobacterium	976|Bacteroidetes	L	Transposase IS200 like	-	-	-	-	-	-	-	-	-	-	-	-	Y1_Tnp
BYD3_k127_3438056_6	1046627.BZARG_2806	3.868e-64	223.0	COG1943@1|root,COG1943@2|Bacteria,4NQTF@976|Bacteroidetes,1I250@117743|Flavobacteriia	976|Bacteroidetes	L	Transposase IS200 like	-	-	-	-	-	-	-	-	-	-	-	-	Y1_Tnp
BYD3_k127_3465672_6	1210884.HG799463_gene9619	2.74e-142	480.0	COG3829@1|root,COG3829@2|Bacteria	2|Bacteria	T	transcription factor binding	-	-	-	ko:K15836	-	-	-	-	ko00000,ko03000	-	-	-	GAF_2,HTH_8,PAS,PAS_4,PAS_9,Sigma54_activat
BYD3_k127_3465672_11	1227739.Hsw_0296	5.143e-71	242.0	COG0229@1|root,COG0229@2|Bacteria,4NQEY@976|Bacteroidetes,47PZ4@768503|Cytophagia	976|Bacteroidetes	O	peptide methionine sulfoxide reductase	msrB	-	1.8.4.12	ko:K07305	-	-	-	-	ko00000,ko01000	-	-	-	PMSR,SelR
BYD3_k127_3465672_13	991.IW20_21410	1.818e-37	149.0	COG0664@1|root,COG0664@2|Bacteria,4NKW5@976|Bacteroidetes,1I3BU@117743|Flavobacteriia,2NV2W@237|Flavobacterium	976|Bacteroidetes	K	CRP FNR family transcriptional regulator	-	-	-	ko:K10914	ko02020,ko02024,ko02025,ko02026,ko05111,map02020,map02024,map02025,map02026,map05111	-	-	-	ko00000,ko00001,ko03000	-	-	-	HTH_Crp_2,cNMP_binding
BYD3_k127_3465672_8	925409.KI911562_gene176	2.094e-116	379.0	COG1028@1|root,COG1028@2|Bacteria,4NH1Y@976|Bacteroidetes,1ISQU@117747|Sphingobacteriia	976|Bacteroidetes	IQ	KR domain	-	-	1.1.1.47	ko:K00034	ko00030,ko01120,ko01200,map00030,map01120,map01200	-	R01520,R01521	RC00066	ko00000,ko00001,ko01000	-	-	-	adh_short_C2
BYD3_k127_3465672_0	945713.IALB_1959	0.0	1325.0	COG2334@1|root,COG2334@2|Bacteria	2|Bacteria	S	homoserine kinase activity	-	-	2.7.1.39	ko:K02204	ko00260,ko01100,ko01110,ko01120,ko01230,map00260,map01100,map01110,map01120,map01230	M00018	R01771	RC00002,RC00017	ko00000,ko00001,ko00002,ko01000	-	-	-	APH,Glyco_hydro_63
BYD3_k127_3465672_1	1121373.KB903620_gene2082	5.287e-217	692.0	COG3408@1|root,COG3408@2|Bacteria,4NF09@976|Bacteroidetes,47M96@768503|Cytophagia	976|Bacteroidetes	G	Glycogen debranching enzyme	-	-	-	-	-	-	-	-	-	-	-	-	GDE_C,GDE_N
BYD3_k127_3465672_12	696747.NIES39_A04160	3.091e-54	198.0	COG0572@1|root,COG0572@2|Bacteria,1G67K@1117|Cyanobacteria,1HC0C@1150|Oscillatoriales	1117|Cyanobacteria	F	uridine kinase	-	-	2.7.1.48	ko:K00876	ko00240,ko00983,ko01100,map00240,map00983,map01100	-	R00513,R00516,R00517,R00962,R00964,R00967,R00968,R00970,R01548,R01549,R01880,R02091,R02096,R02097,R02327,R02332,R02371,R02372,R08232	RC00002,RC00017	ko00000,ko00001,ko01000	-	-	-	PRK
BYD3_k127_3465672_10	211165.AJLN01000133_gene5922	7.185e-78	269.0	COG0580@1|root,COG0580@2|Bacteria,1G3MJ@1117|Cyanobacteria	1117|Cyanobacteria	U	Belongs to the MIP aquaporin (TC 1.A.8) family	-	-	-	ko:K06188	-	-	-	-	ko00000,ko02000	1.A.8	-	-	MIP
BYD3_k127_3465672_3	504472.Slin_2515	8.095e-200	634.0	COG2303@1|root,COG2303@2|Bacteria,4NEF2@976|Bacteroidetes,47U8K@768503|Cytophagia	976|Bacteroidetes	E	GMC oxidoreductase	-	-	-	-	-	-	-	-	-	-	-	-	FAD_binding_2,GMC_oxred_C,GMC_oxred_N,NAD_binding_8
BYD3_k127_3465672_17	709986.Deima_1565	4.006e-20	94.0	COG4828@1|root,COG4828@2|Bacteria	2|Bacteria	S	Protein of unknown function (DUF1622)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1622
BYD3_k127_3465672_7	1519464.HY22_02900	7.288e-136	440.0	COG0346@1|root,COG0346@2|Bacteria	2|Bacteria	E	lactoylglutathione lyase activity	-	-	-	-	-	-	-	-	-	-	-	-	Glyoxalase
BYD3_k127_3465672_16	1205908.AKXW01000069_gene3563	2.793e-24	113.0	COG3350@1|root,COG3350@2|Bacteria,1N0GC@1224|Proteobacteria,1S846@1236|Gammaproteobacteria,1XY38@135623|Vibrionales	135623|Vibrionales	S	YHS domain	-	-	-	-	-	-	-	-	-	-	-	-	YHS
BYD3_k127_3465672_15	929562.Emtol_3558	4.612e-27	122.0	COG3350@1|root,COG3350@2|Bacteria,4NS9P@976|Bacteroidetes,47Q9E@768503|Cytophagia	976|Bacteroidetes	S	monooxygenase activity	-	-	-	-	-	-	-	-	-	-	-	-	YHS
BYD3_k127_3465672_14	1185876.BN8_02798	3.533e-33	134.0	COG3193@1|root,COG3193@2|Bacteria,4NP80@976|Bacteroidetes,47SA6@768503|Cytophagia	976|Bacteroidetes	S	Haem-degrading	-	-	-	-	-	-	-	-	-	-	-	-	Haem_degrading
BYD3_k127_3465672_2	504472.Slin_2519	6.376e-212	671.0	COG3386@1|root,COG3386@2|Bacteria,4NS13@976|Bacteroidetes,47UF3@768503|Cytophagia	976|Bacteroidetes	G	SMP-30/Gluconolaconase/LRE-like region	-	-	3.1.1.17	ko:K01053	ko00030,ko00053,ko00930,ko01100,ko01110,ko01120,ko01130,ko01200,ko01220,map00030,map00053,map00930,map01100,map01110,map01120,map01130,map01200,map01220	M00129	R01519,R02933,R03751	RC00537,RC00983	ko00000,ko00001,ko00002,ko01000,ko04147	-	-	-	SGL
BYD3_k127_3465672_4	929703.KE386491_gene2861	1.043e-188	598.0	COG0015@1|root,COG0015@2|Bacteria,4NFY8@976|Bacteroidetes,47KAQ@768503|Cytophagia	976|Bacteroidetes	F	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily	purB	-	4.3.2.2	ko:K01756	ko00230,ko00250,ko01100,ko01110,ko01130,map00230,map00250,map01100,map01110,map01130	M00048,M00049	R01083,R04559	RC00379,RC00444,RC00445	ko00000,ko00001,ko00002,ko01000	-	-	-	ADSL_C,ASL_C,Lyase_1
BYD3_k127_3465672_5	1237149.C900_05610	7.092e-172	546.0	COG1018@1|root,COG1018@2|Bacteria,4NF24@976|Bacteroidetes,47KY6@768503|Cytophagia	976|Bacteroidetes	C	PFAM 2Fe-2S iron-sulfur cluster binding domain	dmpP	-	-	ko:K02613	ko00360,ko01120,map00360,map01120	-	R09838	RC02690	ko00000,ko00001	-	-	-	FAD_binding_6,Fer2,NAD_binding_1
BYD3_k127_3465672_9	1434325.AZQN01000001_gene14	6.987e-91	304.0	COG3669@1|root,COG3669@2|Bacteria,4NEDX@976|Bacteroidetes,47JNA@768503|Cytophagia	976|Bacteroidetes	G	Coagulation factor 5 8 type domain protein	-	-	3.2.1.51	ko:K01206	ko00511,map00511	-	-	-	ko00000,ko00001,ko01000,ko04147	-	GH29	-	Alpha_L_fucos,F5_F8_type_C
BYD3_k127_3498274_2	1121904.ARBP01000012_gene1193	2.214e-72	253.0	COG0577@1|root,COG0577@2|Bacteria,4NDUK@976|Bacteroidetes,47JJN@768503|Cytophagia	976|Bacteroidetes	V	FtsX-like permease family	-	-	-	-	-	-	-	-	-	-	-	-	FtsX,MacB_PCD
BYD3_k127_3498274_1	1121904.ARBP01000027_gene759	9.878e-223	714.0	COG0577@1|root,COG0577@2|Bacteria,4NDUK@976|Bacteroidetes,47KMJ@768503|Cytophagia	976|Bacteroidetes	V	FtsX-like permease family	-	-	-	-	-	-	-	-	-	-	-	-	FtsX,MacB_PCD
BYD3_k127_3498274_4	471854.Dfer_2631	2.331e-38	155.0	2F8CU@1|root,340RS@2|Bacteria,4P4UA@976|Bacteroidetes,47VFG@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_3498274_3	1185876.BN8_00858	1.724e-53	198.0	2DBZX@1|root,2ZC4A@2|Bacteria,4NMEW@976|Bacteroidetes,47UX0@768503|Cytophagia	976|Bacteroidetes	S	Putative auto-transporter adhesin, head GIN domain	-	-	-	-	-	-	-	-	-	-	-	-	DUF2807
BYD3_k127_3498274_0	1124780.ANNU01000051_gene2088	5.743e-303	949.0	COG1643@1|root,COG1643@2|Bacteria,4NFJ7@976|Bacteroidetes,47KRZ@768503|Cytophagia	976|Bacteroidetes	L	DEAD DEAH box helicase	-	-	3.6.4.13	ko:K03579	-	-	-	-	ko00000,ko01000	-	-	-	DEAD,HA2,Helicase_C,HrpB_C
BYD3_k127_3578248_2	1237149.C900_04111	7.317e-105	343.0	COG1309@1|root,COG1309@2|Bacteria,4NEUA@976|Bacteroidetes,47P97@768503|Cytophagia	976|Bacteroidetes	K	Bacterial regulatory proteins, tetR family	-	-	-	-	-	-	-	-	-	-	-	-	TetR_N
BYD3_k127_3578248_11	1403819.BATR01000183_gene6334	3.694e-12	73.0	COG0400@1|root,COG0400@2|Bacteria,46VTC@74201|Verrucomicrobia	74201|Verrucomicrobia	S	carboxylic ester hydrolase activity	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_3578248_12	595460.RRSWK_01426	2.094e-06	58.0	COG0400@1|root,COG1629@1|root,COG0400@2|Bacteria,COG1629@2|Bacteria	2|Bacteria	P	transport	XK27_00220	-	-	ko:K06999	-	-	-	-	ko00000	-	-	-	Abhydrolase_5,CarbopepD_reg_2,DUF4139
BYD3_k127_3578248_0	504472.Slin_0947	8.739e-168	556.0	COG0577@1|root,COG0577@2|Bacteria,4NDUK@976|Bacteroidetes,47NWV@768503|Cytophagia	976|Bacteroidetes	V	MacB-like periplasmic core domain	-	-	-	ko:K02004	-	M00258	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	FtsX,MacB_PCD
BYD3_k127_3578248_10	517418.Ctha_2510	2.799e-27	119.0	COG3258@1|root,COG3258@2|Bacteria	2|Bacteria	C	Cytochrome c	-	-	-	ko:K08738	ko00920,ko01100,ko01120,ko01524,ko02020,ko04115,ko04210,ko04214,ko04215,ko04932,ko05010,ko05012,ko05014,ko05016,ko05134,ko05145,ko05152,ko05161,ko05164,ko05167,ko05168,ko05200,ko05210,ko05222,ko05416,map00920,map01100,map01120,map01524,map02020,map04115,map04210,map04214,map04215,map04932,map05010,map05012,map05014,map05016,map05134,map05145,map05152,map05161,map05164,map05167,map05168,map05200,map05210,map05222,map05416	M00595	R10151	RC03151,RC03152	ko00000,ko00001,ko00002	3.D.4.6	-	-	Cytochrome_CBB3,DUF3365
BYD3_k127_3578248_7	1237149.C900_03068	5.224e-69	244.0	2CDET@1|root,2ZBN1@2|Bacteria,4NN6D@976|Bacteroidetes	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_3578248_5	1237149.C900_03067	5.758e-84	287.0	28M39@1|root,2ZAHI@2|Bacteria,4NM3I@976|Bacteroidetes	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_3578248_13	195522.BD01_0500	9.961e-06	56.0	COG1107@1|root,arCOG01312@1|root,arCOG00429@2157|Archaea,arCOG01312@2157|Archaea	2157|Archaea	L	COG1107 Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain	-	-	-	-	-	-	-	-	-	-	-	-	ABC_transp_aux,CarboxypepD_reg,DDOST_48kD
BYD3_k127_3578248_1	1123276.KB893255_gene1874	2.261e-154	516.0	COG0577@1|root,COG0577@2|Bacteria,4NDUK@976|Bacteroidetes,47JJN@768503|Cytophagia	976|Bacteroidetes	V	FtsX-like permease family	-	-	-	-	-	-	-	-	-	-	-	-	FtsX,MacB_PCD
BYD3_k127_3578248_9	1034807.FBFL15_0432	3.352e-52	195.0	COG0596@1|root,COG0596@2|Bacteria,4NJSG@976|Bacteroidetes,1I209@117743|Flavobacteriia,2NVAY@237|Flavobacterium	976|Bacteroidetes	S	Alpha beta	-	-	-	-	-	-	-	-	-	-	-	-	Abhydrolase_1,CarbopepD_reg_2
BYD3_k127_3578248_8	700598.Niako_3472	3.922e-60	210.0	COG0640@1|root,COG0640@2|Bacteria,4NSDX@976|Bacteroidetes,1IXWT@117747|Sphingobacteriia	976|Bacteroidetes	K	PFAM Bacterial regulatory protein, arsR family	-	-	-	-	-	-	-	-	-	-	-	-	HTH_20
BYD3_k127_3578248_4	485917.Phep_2387	1.291e-88	293.0	COG3832@1|root,COG3832@2|Bacteria,4P25C@976|Bacteroidetes,1IV33@117747|Sphingobacteriia	976|Bacteroidetes	S	PFAM Activator of Hsp90 ATPase homolog 1-like protein	-	-	-	-	-	-	-	-	-	-	-	-	AHSA1
BYD3_k127_3578248_15	471854.Dfer_5547	0.0005948	42.0	2EA47@1|root,33E4W@2|Bacteria	2|Bacteria	S	Protein of unknown function (DUF1579)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1579
BYD3_k127_3578248_14	471854.Dfer_5547	2.443e-05	47.0	2EA47@1|root,33E4W@2|Bacteria	2|Bacteria	S	Protein of unknown function (DUF1579)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1579
BYD3_k127_3578248_3	616991.JPOO01000003_gene1720	5.631e-100	328.0	COG0262@1|root,COG0262@2|Bacteria,4NPM3@976|Bacteroidetes,1I665@117743|Flavobacteriia	976|Bacteroidetes	H	RibD C-terminal domain	-	-	1.5.1.3	ko:K00287	ko00670,ko00790,ko01100,ko01523,map00670,map00790,map01100,map01523	M00126,M00840	R00936,R00937,R00939,R00940,R02235,R02236,R11765	RC00109,RC00110,RC00158	ko00000,ko00001,ko00002,ko01000	-	-	-	RibD_C
BYD3_k127_3578248_6	1121904.ARBP01000008_gene3264	6.503e-78	263.0	COG2382@1|root,COG3386@1|root,COG2382@2|Bacteria,COG3386@2|Bacteria,4NK15@976|Bacteroidetes,47MMH@768503|Cytophagia	976|Bacteroidetes	P	Putative esterase	-	-	-	ko:K07214	-	-	-	-	ko00000	-	-	-	Esterase,SGL
BYD3_k127_365061_2	1267534.KB906756_gene343	5.345e-197	624.0	COG0412@1|root,COG0412@2|Bacteria,3Y2PZ@57723|Acidobacteria,2JKJA@204432|Acidobacteriia	204432|Acidobacteriia	Q	Dienelactone hydrolase	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_365061_1	1185876.BN8_04107	4.215e-198	626.0	COG0673@1|root,COG0673@2|Bacteria,4NG5T@976|Bacteroidetes,47MFM@768503|Cytophagia	976|Bacteroidetes	S	Putative oxidoreductase C terminal domain	-	-	-	-	-	-	-	-	-	-	-	-	GFO_IDH_MocA,Oxidoreduct_C
BYD3_k127_365061_4	926549.KI421517_gene1667	1.982e-76	264.0	COG3257@1|root,COG3257@2|Bacteria,4NKCS@976|Bacteroidetes,47M25@768503|Cytophagia	976|Bacteroidetes	L	Cupin domain	-	-	3.5.3.26	ko:K14977	ko00230,ko01120,map00230,map01120	-	R05554	RC01419	ko00000,ko00001,ko01000	-	-	-	AraC_binding,Cupin_2
BYD3_k127_365061_0	926549.KI421517_gene1668	1.117e-240	749.0	COG0673@1|root,COG0673@2|Bacteria,4NGHJ@976|Bacteroidetes,47NH0@768503|Cytophagia	976|Bacteroidetes	S	Oxidoreductase family, NAD-binding Rossmann fold	-	-	-	-	-	-	-	-	-	-	-	-	GFO_IDH_MocA
BYD3_k127_365061_3	509635.N824_15670	2.439e-141	453.0	COG3828@1|root,COG3828@2|Bacteria,4NEWH@976|Bacteroidetes,1IR1M@117747|Sphingobacteriia	976|Bacteroidetes	S	Methane oxygenase PmoA	-	-	-	-	-	-	-	-	-	-	-	-	PmoA
BYD3_k127_3684215_2	1237149.C900_01875	7.486e-78	264.0	COG0028@1|root,COG0028@2|Bacteria,4NENG@976|Bacteroidetes,47KS8@768503|Cytophagia	976|Bacteroidetes	EH	TIGRFAM acetolactate synthase, large subunit, biosynthetic type	ilvB	-	2.2.1.6	ko:K01652	ko00290,ko00650,ko00660,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00290,map00650,map00660,map00770,map01100,map01110,map01130,map01210,map01230	M00019,M00570	R00006,R00014,R00226,R03050,R04672,R04673,R08648	RC00027,RC00106,RC01192,RC02744,RC02893	ko00000,ko00001,ko00002,ko01000	-	-	-	TPP_enzyme_C,TPP_enzyme_M,TPP_enzyme_N
BYD3_k127_3684215_0	1237149.C900_01877	2.606e-186	586.0	COG0059@1|root,COG0059@2|Bacteria,4NFYV@976|Bacteroidetes,47KF1@768503|Cytophagia	976|Bacteroidetes	EH	Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate	ilvC	-	1.1.1.86	ko:K00053	ko00290,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00290,map00770,map01100,map01110,map01130,map01210,map01230	M00019,M00570	R03051,R04439,R04440,R05068,R05069,R05071	RC00726,RC00836,RC00837,RC01726	ko00000,ko00001,ko00002,ko01000	-	-	-	IlvC,IlvN
BYD3_k127_3684215_1	700598.Niako_0107	4.37e-181	575.0	COG1171@1|root,COG1171@2|Bacteria,4NEY2@976|Bacteroidetes,1INNU@117747|Sphingobacteriia	976|Bacteroidetes	E	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA	ilvA	-	4.3.1.19	ko:K01754	ko00260,ko00290,ko01100,ko01110,ko01130,ko01200,ko01230,map00260,map00290,map01100,map01110,map01130,map01200,map01230	M00570	R00220,R00996	RC00418,RC02600	ko00000,ko00001,ko00002,ko01000	-	-	-	PALP,Thr_dehydrat_C
BYD3_k127_3685542_0	1124780.ANNU01000006_gene2891	0.0	1536.0	COG0060@1|root,COG0060@2|Bacteria,4NEYT@976|Bacteroidetes,47JWU@768503|Cytophagia	976|Bacteroidetes	J	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)	ileS	GO:0003674,GO:0003824,GO:0004812,GO:0004822,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006428,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576	6.1.1.5	ko:K01870	ko00970,map00970	M00359,M00360	R03656	RC00055,RC00523	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	-	-	-	Anticodon_1,tRNA-synt_1
BYD3_k127_3685542_6	1237149.C900_03145	7.027e-78	266.0	COG0597@1|root,COG0597@2|Bacteria,4NEZN@976|Bacteroidetes,47MEJ@768503|Cytophagia	976|Bacteroidetes	M	This protein specifically catalyzes the removal of signal peptides from prolipoproteins	lspA	-	3.4.23.36	ko:K03101	ko03060,map03060	-	-	-	ko00000,ko00001,ko01000,ko01002	-	-	-	Peptidase_A8
BYD3_k127_3685542_2	1121904.ARBP01000006_gene4054	4.114e-257	802.0	COG1115@1|root,COG1115@2|Bacteria,4NDX7@976|Bacteroidetes,47UI6@768503|Cytophagia	976|Bacteroidetes	U	Sodium:alanine symporter family	-	-	-	ko:K03310	-	-	-	-	ko00000	2.A.25	-	-	Na_Ala_symp
BYD3_k127_3685542_3	929556.Solca_0665	7.122e-219	687.0	COG0531@1|root,COG0531@2|Bacteria,4NDU2@976|Bacteroidetes,1IPK3@117747|Sphingobacteriia	976|Bacteroidetes	E	amino acid	-	-	-	ko:K03294	-	-	-	-	ko00000	2.A.3.2	-	-	AA_permease,AA_permease_2
BYD3_k127_3685542_5	1237149.C900_04521	4.236e-83	281.0	COG0745@1|root,COG0745@2|Bacteria,4NM5Q@976|Bacteroidetes,47PED@768503|Cytophagia	976|Bacteroidetes	K	Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain	-	-	-	-	-	-	-	-	-	-	-	-	Response_reg,Trans_reg_C
BYD3_k127_3685542_4	1237149.C900_04522	3.438e-156	503.0	COG5002@1|root,COG5002@2|Bacteria,4PKBV@976|Bacteroidetes,47M71@768503|Cytophagia	976|Bacteroidetes	T	Signal transduction histidine kinase	rprX	-	2.7.13.3	ko:K07636	ko02020,map02020	M00434	-	-	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	-	-	-	HATPase_c,HisKA
BYD3_k127_3685542_7	761193.Runsl_3819	2.442e-26	113.0	2CG1Y@1|root,333IH@2|Bacteria,4NVMK@976|Bacteroidetes,47RKN@768503|Cytophagia	976|Bacteroidetes	S	Protein of unknown function (DUF1573)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1573
BYD3_k127_3685542_1	880070.Cycma_2870	6.396e-275	861.0	COG2352@1|root,COG2352@2|Bacteria,4NFC0@976|Bacteroidetes,47NF0@768503|Cytophagia	976|Bacteroidetes	C	Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle	ppc	-	4.1.1.31	ko:K01595	ko00620,ko00680,ko00710,ko00720,ko01100,ko01120,ko01200,map00620,map00680,map00710,map00720,map01100,map01120,map01200	M00168,M00170,M00171,M00172,M00173,M00346,M00374	R00345	RC02741	ko00000,ko00001,ko00002,ko01000	-	-	-	PEPcase
BYD3_k127_3726818_5	485918.Cpin_4061	6.917e-134	461.0	COG1752@1|root,COG1752@2|Bacteria,4NIDR@976|Bacteroidetes,1IUTY@117747|Sphingobacteriia	976|Bacteroidetes	S	Esterase of the alpha-beta hydrolase superfamily	-	-	-	-	-	-	-	-	-	-	-	-	Patatin
BYD3_k127_3726818_23	373994.Riv7116_6288	4.548e-44	169.0	COG0262@1|root,COG0262@2|Bacteria,1G4ME@1117|Cyanobacteria,1HU9I@1161|Nostocales	1117|Cyanobacteria	H	PFAM RibD C-terminal domain	-	-	-	-	-	-	-	-	-	-	-	-	RibD_C
BYD3_k127_3726818_29	1158294.JOMI01000009_gene1243	1.255e-34	136.0	COG1652@1|root,COG1652@2|Bacteria,4NNRS@976|Bacteroidetes	976|Bacteroidetes	S	LysM domain	-	-	-	-	-	-	-	-	-	-	-	-	LysM
BYD3_k127_3726818_32	929556.Solca_3050	4.927e-25	112.0	COG2823@1|root,COG2823@2|Bacteria,4NUHM@976|Bacteroidetes,1ITPV@117747|Sphingobacteriia	976|Bacteroidetes	S	BON domain	-	-	-	-	-	-	-	-	-	-	-	-	BON
BYD3_k127_3726818_31	1123278.KB893422_gene1601	2.36e-25	107.0	COG3360@1|root,COG3360@2|Bacteria,4NURJ@976|Bacteroidetes,47SWS@768503|Cytophagia	976|Bacteroidetes	S	Dodecin	-	-	-	ko:K09165	-	-	-	-	ko00000	-	-	-	Dodecin
BYD3_k127_3726818_1	468059.AUHA01000008_gene2763	8.191e-196	623.0	COG3653@1|root,COG3653@2|Bacteria,4NHDD@976|Bacteroidetes,1IR8Z@117747|Sphingobacteriia	976|Bacteroidetes	Q	PFAM D-aminoacylase, C-terminal region	-	-	3.5.1.81	ko:K06015	-	-	R02192	RC00064,RC00328	ko00000,ko01000	-	-	-	Amidohydro_3
BYD3_k127_3726818_28	1123248.KB893348_gene331	4.942e-36	141.0	COG3631@1|root,COG3631@2|Bacteria,4NVWJ@976|Bacteroidetes,1IZGC@117747|Sphingobacteriia	976|Bacteroidetes	S	SnoaL-like domain	-	-	-	-	-	-	-	-	-	-	-	-	SnoaL_4
BYD3_k127_3726818_37	1122611.KB903981_gene3376	3.375e-16	84.0	COG1846@1|root,COG1846@2|Bacteria,2INEU@201174|Actinobacteria	201174|Actinobacteria	K	Winged helix DNA-binding domain	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_3726818_33	1123242.JH636434_gene3961	9.235e-25	109.0	COG0662@1|root,COG0662@2|Bacteria,2IZVR@203682|Planctomycetes	203682|Planctomycetes	G	Cupin	-	-	-	-	-	-	-	-	-	-	-	-	Cupin_2
BYD3_k127_3726818_40	926549.KI421517_gene2948	1.998e-07	55.0	2DFUX@1|root,2ZT8Y@2|Bacteria,4P92B@976|Bacteroidetes,47WV3@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_3726818_18	926556.Echvi_1553	4.924e-52	194.0	COG0478@1|root,COG0478@2|Bacteria,4PMVC@976|Bacteroidetes	976|Bacteroidetes	T	Lipopolysaccharide kinase (Kdo/WaaP) family	-	-	-	-	-	-	-	-	-	-	-	-	Kdo
BYD3_k127_3726818_12	1123008.KB905696_gene2996	1.466e-91	308.0	COG0596@1|root,COG0596@2|Bacteria,4NN2I@976|Bacteroidetes	976|Bacteroidetes	S	Alpha/beta hydrolase family	-	-	-	-	-	-	-	-	-	-	-	-	Abhydrolase_6
BYD3_k127_3726818_17	1121939.L861_17310	1.667e-67	233.0	COG3865@1|root,COG3865@2|Bacteria,1N7IY@1224|Proteobacteria,1S25M@1236|Gammaproteobacteria,1XNFA@135619|Oceanospirillales	135619|Oceanospirillales	S	3-demethylubiquinone-9 3-methyltransferase	-	-	-	-	-	-	-	-	-	-	-	-	3-dmu-9_3-mt
BYD3_k127_3726818_24	1408813.AYMG01000017_gene5623	1.745e-39	148.0	COG2350@1|root,COG2350@2|Bacteria,4NVI4@976|Bacteroidetes,1IUFS@117747|Sphingobacteriia	976|Bacteroidetes	S	YCII-related domain	-	-	-	-	-	-	-	-	-	-	-	-	YCII
BYD3_k127_3726818_11	1121481.AUAS01000009_gene196	8.57e-96	322.0	COG2897@1|root,COG2897@2|Bacteria,4NF85@976|Bacteroidetes,47PN4@768503|Cytophagia	976|Bacteroidetes	P	Rhodanese Homology Domain	sseA	-	2.8.1.1,2.8.1.2	ko:K01011	ko00270,ko00920,ko01100,ko01120,ko04122,map00270,map00920,map01100,map01120,map04122	-	R01931,R03105,R03106	RC00214	ko00000,ko00001,ko01000	-	-	-	Rhodanese
BYD3_k127_3726818_25	426117.M446_0542	8.971e-38	147.0	COG3193@1|root,COG3193@2|Bacteria,1RGUD@1224|Proteobacteria,2VA9A@28211|Alphaproteobacteria,1JYVB@119045|Methylobacteriaceae	28211|Alphaproteobacteria	S	Haem-degrading	-	-	-	-	-	-	-	-	-	-	-	-	Haem_degrading
BYD3_k127_3726818_2	700598.Niako_6201	1.76e-172	545.0	COG0667@1|root,COG0667@2|Bacteria,4NEB0@976|Bacteroidetes,1IRC6@117747|Sphingobacteriia	976|Bacteroidetes	C	aldo keto reductase	-	-	-	-	-	-	-	-	-	-	-	-	Aldo_ket_red
BYD3_k127_3726818_9	485917.Phep_1339	6.041e-108	355.0	COG1028@1|root,COG1028@2|Bacteria,4NHDB@976|Bacteroidetes,1INQP@117747|Sphingobacteriia	976|Bacteroidetes	IQ	Short-chain dehydrogenase reductase SDR	-	-	-	-	-	-	-	-	-	-	-	-	adh_short_C2
BYD3_k127_3726818_0	1048983.EL17_08400	1.046e-224	722.0	COG0577@1|root,COG0577@2|Bacteria,4NDUK@976|Bacteroidetes,47NTJ@768503|Cytophagia	976|Bacteroidetes	V	MacB-like periplasmic core domain	-	-	-	ko:K02004	-	M00258	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	FtsX,MacB_PCD
BYD3_k127_3726818_26	1121898.Q766_08120	5.839e-37	145.0	COG3832@1|root,COG3832@2|Bacteria,4NPAB@976|Bacteroidetes,1I2GF@117743|Flavobacteriia,2NVZA@237|Flavobacterium	976|Bacteroidetes	J	glyoxalase III activity	-	-	-	-	-	-	-	-	-	-	-	-	AHSA1
BYD3_k127_3726818_36	1408473.JHXO01000002_gene3904	5.903e-18	91.0	2AU1F@1|root,31JMK@2|Bacteria,4NQUW@976|Bacteroidetes	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_3726818_21	926549.KI421517_gene1175	1.165e-47	175.0	COG0071@1|root,COG0071@2|Bacteria,4NQXY@976|Bacteroidetes,47R7Q@768503|Cytophagia	976|Bacteroidetes	O	Belongs to the small heat shock protein (HSP20) family	-	-	-	ko:K13993	ko04141,map04141	-	-	-	ko00000,ko00001,ko03110	-	-	-	HSP20
BYD3_k127_3726818_4	313606.M23134_01800	1.04e-136	440.0	COG1131@1|root,COG1131@2|Bacteria,4NEH0@976|Bacteroidetes,47TXK@768503|Cytophagia	976|Bacteroidetes	V	ATPases associated with a variety of cellular activities	gldA	-	-	ko:K01990	-	M00254	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	ABC_tran
BYD3_k127_3726818_10	1408473.JHXO01000016_gene1933	7.759e-98	324.0	COG1277@1|root,COG1277@2|Bacteria,4NG5G@976|Bacteroidetes,2FT12@200643|Bacteroidia	976|Bacteroidetes	S	ABC-2 family transporter protein	-	-	-	ko:K01992	-	M00254	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	ABC2_membrane_2
BYD3_k127_3726818_3	869213.JCM21142_401	9.616e-151	493.0	COG3225@1|root,COG3225@2|Bacteria,4NF62@976|Bacteroidetes,47UYK@768503|Cytophagia	976|Bacteroidetes	N	transport system involved in gliding motility, auxiliary component	-	-	-	-	-	-	-	-	-	-	-	-	ABC_transp_aux
BYD3_k127_3726818_34	869213.JCM21142_400	9.998e-23	109.0	2D6WA@1|root,32TMZ@2|Bacteria,4NU16@976|Bacteroidetes,47VUX@768503|Cytophagia	976|Bacteroidetes	S	Domain of unknown function (DUF4340)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4340
BYD3_k127_3726818_13	994573.T472_0200300	6.724e-91	314.0	COG1593@1|root,COG1593@2|Bacteria,1TPNU@1239|Firmicutes,248BY@186801|Clostridia,36G8D@31979|Clostridiaceae	186801|Clostridia	G	Trap dicarboxylate transporter, dctm subunit	-	-	-	-	-	-	-	-	-	-	-	-	DctM
BYD3_k127_3726818_38	333138.LQ50_19480	5.485e-11	70.0	COG3090@1|root,COG3090@2|Bacteria,1V3PZ@1239|Firmicutes,4HI3P@91061|Bacilli,1ZFMD@1386|Bacillus	91061|Bacilli	G	Tripartite ATP-independent periplasmic transporters, DctQ component	-	-	-	-	-	-	-	-	-	-	-	-	DctQ
BYD3_k127_3726818_20	1211035.CD30_05670	3.766e-48	187.0	COG1638@1|root,COG1638@2|Bacteria,1UCYF@1239|Firmicutes,4HB3D@91061|Bacilli	91061|Bacilli	G	C4-dicarboxylate ABC transporter, substrate-binding protein	-	-	-	-	-	-	-	-	-	-	-	-	DctP
BYD3_k127_3726818_14	742733.HMPREF9469_05920	3.882e-86	300.0	COG1228@1|root,COG1228@2|Bacteria,1TQQ0@1239|Firmicutes,25CAE@186801|Clostridia	186801|Clostridia	Q	Amidohydrolase family	-	-	-	-	-	-	-	-	-	-	-	-	Amidohydro_1
BYD3_k127_3726818_30	487316.BBNM01000004_gene437	2.156e-29	128.0	COG2084@1|root,COG2084@2|Bacteria,1RA7F@1224|Proteobacteria,1RMMY@1236|Gammaproteobacteria,3NKEJ@468|Moraxellaceae	1236|Gammaproteobacteria	I	Belongs to the 3-hydroxyisobutyrate dehydrogenase family	mmsB	-	1.1.1.31	ko:K00020	ko00280,ko01100,map00280,map01100	-	R05066	RC00099	ko00000,ko00001,ko01000	-	-	-	NAD_binding_11,NAD_binding_2
BYD3_k127_3726818_19	871963.Desdi_0799	1.129e-50	191.0	COG1143@1|root,COG1143@2|Bacteria,1UIF0@1239|Firmicutes,25EKC@186801|Clostridia,2657D@186807|Peptococcaceae	186801|Clostridia	C	4Fe-4S dicluster domain	-	-	-	-	-	-	-	-	-	-	-	-	Fer4
BYD3_k127_3726818_27	401526.TcarDRAFT_2289	9.862e-37	148.0	2AV93@1|root,31M00@2|Bacteria,1V94N@1239|Firmicutes,4H7KF@909932|Negativicutes	909932|Negativicutes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_3726818_8	1210884.HG799464_gene10793	8.692e-118	394.0	COG1052@1|root,COG1052@2|Bacteria,2IXB3@203682|Planctomycetes	203682|Planctomycetes	CH	PFAM D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain	-	-	-	ko:K04496	ko04310,ko04330,ko05200,ko05220,map04310,map04330,map05200,map05220	-	-	-	ko00000,ko00001,ko04131	-	-	-	2-Hacid_dh,2-Hacid_dh_C
BYD3_k127_3726818_7	1191523.MROS_2634	5.808e-124	409.0	2B7NJ@1|root,32VIJ@2|Bacteria	2|Bacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_3726818_35	485918.Cpin_5259	7.392e-22	102.0	2C0BR@1|root,32RD6@2|Bacteria,4PQ1A@976|Bacteroidetes	976|Bacteroidetes	S	Protein of unknown function (DUF4255)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4255
BYD3_k127_3726818_6	445961.IW15_17120	3.201e-133	439.0	COG3497@1|root,COG3497@2|Bacteria,4NEKK@976|Bacteroidetes,1HZQA@117743|Flavobacteriia,3ZR4Z@59732|Chryseobacterium	976|Bacteroidetes	S	Phage tail sheath C-terminal domain	-	-	-	ko:K06907	-	-	-	-	ko00000	-	-	-	Phage_sheath_1,Phage_sheath_1C
BYD3_k127_3726818_16	376686.Fjoh_3151	4.375e-68	233.0	2DB76@1|root,2Z7JZ@2|Bacteria,4NQDC@976|Bacteroidetes,1I2ER@117743|Flavobacteriia,2NSQE@237|Flavobacterium	976|Bacteroidetes	S	T4-like virus tail tube protein gp19	-	-	-	-	-	-	-	-	-	-	-	-	Phage_T4_gp19
BYD3_k127_3726818_22	1122176.KB903539_gene1420	3.014e-46	170.0	2DMQT@1|root,32T2H@2|Bacteria,4NN19@976|Bacteroidetes,1ISWP@117747|Sphingobacteriia	976|Bacteroidetes	S	PFAM T4-like virus tail tube protein gp19	-	-	-	-	-	-	-	-	-	-	-	-	Phage_T4_gp19
BYD3_k127_3726818_15	1469607.KK073769_gene5931	3.501e-70	244.0	COG1652@1|root,COG1652@2|Bacteria,1G8DU@1117|Cyanobacteria,1HJIB@1161|Nostocales	1117|Cyanobacteria	S	LysM domain	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_3732925_0	1265505.ATUG01000002_gene1789	8.682e-276	856.0	COG2303@1|root,COG2303@2|Bacteria,1MV19@1224|Proteobacteria,42N4C@68525|delta/epsilon subdivisions,2WJIH@28221|Deltaproteobacteria,2MJAH@213118|Desulfobacterales	28221|Deltaproteobacteria	E	GMC oxidoreductase	-	-	1.1.99.1	ko:K00108	ko00260,ko01100,map00260,map01100	M00555	R01025	RC00087	ko00000,ko00001,ko00002,ko01000	-	-	-	GMC_oxred_C,GMC_oxred_N
BYD3_k127_3732925_2	1237149.C900_02949	8.875e-79	265.0	COG0782@1|root,COG0782@2|Bacteria,4P5Y7@976|Bacteroidetes,47VW6@768503|Cytophagia	976|Bacteroidetes	J	Transcription elongation factor, GreA/GreB, C-term	-	-	-	-	-	-	-	-	-	-	-	-	GreA_GreB
BYD3_k127_3732925_1	1168034.FH5T_04335	3.035e-124	404.0	COG2273@1|root,COG2273@2|Bacteria,4P1QX@976|Bacteroidetes	976|Bacteroidetes	G	Glycosyl hydrolases family 16	-	-	-	-	-	-	-	-	-	-	-	-	Glyco_hydro_16
BYD3_k127_3930040_25	1237149.C900_05853	6.697e-82	276.0	COG2065@1|root,COG2065@2|Bacteria,4NFI1@976|Bacteroidetes,47MTK@768503|Cytophagia	976|Bacteroidetes	F	Pyrimidine operon attenuation protein uracil phosphoribosyltransferase	pyrR	-	2.4.2.9	ko:K02825	ko00240,ko01100,map00240,map01100	-	R00966	RC00063	ko00000,ko00001,ko01000,ko03000	-	-	-	Pribosyltran
BYD3_k127_3930040_10	269798.CHU_0084	5.068e-171	540.0	COG0540@1|root,COG0540@2|Bacteria,4NFIU@976|Bacteroidetes,47KS2@768503|Cytophagia	976|Bacteroidetes	F	Belongs to the ATCase OTCase family	pyrB	GO:0003674,GO:0003824,GO:0004070,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006220,GO:0006221,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009165,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0016740,GO:0016741,GO:0016743,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576	2.1.3.2	ko:K00609	ko00240,ko00250,ko01100,map00240,map00250,map01100	M00051	R01397	RC00064,RC02850	ko00000,ko00001,ko00002,ko01000	-	-	-	OTCace,OTCace_N
BYD3_k127_3930040_4	1237149.C900_05850	1.614e-246	766.0	COG0031@1|root,COG0031@2|Bacteria,4NDZ9@976|Bacteroidetes,47K1B@768503|Cytophagia	976|Bacteroidetes	E	Cystathionine beta-synthase	-	-	4.2.1.22	ko:K01697	ko00260,ko00270,ko01100,ko01130,ko01230,map00260,map00270,map01100,map01130,map01230	M00035,M00338	R00891,R01290,R04942	RC00056,RC00069,RC00256,RC00489,RC01246	ko00000,ko00001,ko00002,ko01000	-	-	-	CBS,PALP
BYD3_k127_3930040_32	1237149.C900_05848	4.555e-61	230.0	COG0457@1|root,COG3437@1|root,COG0457@2|Bacteria,COG3437@2|Bacteria	2|Bacteria	T	response regulator, receiver	-	-	2.7.13.3,2.7.7.65,4.6.1.1	ko:K01768,ko:K03415,ko:K07777,ko:K18967	ko00230,ko02020,ko02025,ko02030,ko04113,ko04213,map00230,map02020,map02025,map02030,map04113,map04213	M00478,M00506,M00695	R00089,R00434	RC00295	ko00000,ko00001,ko00002,ko01000,ko01001,ko02000,ko02022,ko02035	9.B.34.1.1	-	-	5TM-5TMR_LYT,CheW,GGDEF,PAS_3,PAS_9,Response_reg
BYD3_k127_3930040_27	1237149.C900_01882	2.693e-77	274.0	COG2885@1|root,COG2885@2|Bacteria	2|Bacteria	M	chlorophyll binding	-	-	-	-	-	-	-	-	-	-	-	-	OmpA
BYD3_k127_3930040_2	1237149.C900_01880	2.639e-298	934.0	COG4953@1|root,COG4953@2|Bacteria,4NEG5@976|Bacteroidetes,47KYC@768503|Cytophagia	976|Bacteroidetes	M	penicillin-binding protein 1C	pbpC	-	2.4.1.129	ko:K05367	ko00550,map00550	-	-	-	ko00000,ko00001,ko01000,ko01003,ko01011	-	GT51	-	BiPBP_C,Transgly,Transpeptidase
BYD3_k127_3930040_0	1237149.C900_05488	0.0	1994.0	COG2373@1|root,COG2373@2|Bacteria,4NEW9@976|Bacteroidetes,47MDC@768503|Cytophagia	976|Bacteroidetes	S	Alpha-2-Macroglobulin	-	-	-	ko:K06894	-	-	-	-	ko00000	-	-	-	A2M,A2M_N,A2M_N_2,MG1,Thiol-ester_cl
BYD3_k127_3930040_45	272562.CA_C2939	3.309e-29	125.0	COG2197@1|root,COG2197@2|Bacteria,1TRXG@1239|Firmicutes,24FZX@186801|Clostridia,36IJ0@31979|Clostridiaceae	186801|Clostridia	K	helix_turn_helix, Lux Regulon	-	-	-	-	-	-	-	-	-	-	-	-	GerE,Response_reg
BYD3_k127_3930040_47	552811.Dehly_0705	1.061e-21	104.0	COG4585@1|root,COG4585@2|Bacteria,2G8PE@200795|Chloroflexi,34CQA@301297|Dehalococcoidia	301297|Dehalococcoidia	T	Histidine kinase	-	-	-	-	-	-	-	-	-	-	-	-	HATPase_c,HisKA_3
BYD3_k127_3930040_16	1237149.C900_03534	3.725e-132	430.0	COG0668@1|root,COG0668@2|Bacteria,4NHU7@976|Bacteroidetes,47P5J@768503|Cytophagia	976|Bacteroidetes	M	Mechanosensitive ion channel	-	-	-	ko:K16052	-	-	-	-	ko00000,ko02000	1.A.23.4	-	-	MS_channel
BYD3_k127_3930040_29	1469557.JSWF01000016_gene2190	1.681e-70	246.0	COG3034@1|root,COG3034@2|Bacteria,4NNK3@976|Bacteroidetes	976|Bacteroidetes	M	ErfK YbiS YcfS YnhG family protein	-	-	-	-	-	-	-	-	-	-	-	-	TonB_C,YkuD
BYD3_k127_3930040_17	1121957.ATVL01000006_gene2932	1.353e-130	439.0	COG1305@1|root,COG1305@2|Bacteria,4PMBI@976|Bacteroidetes,47YQ0@768503|Cytophagia	976|Bacteroidetes	E	Domain of Unknown Function with PDB structure (DUF3857)	-	-	-	-	-	-	-	-	-	-	-	-	DUF3857
BYD3_k127_3930040_12	1279009.ADICEAN_00907	2.24e-169	553.0	COG1305@1|root,COG1305@2|Bacteria,4NI6P@976|Bacteroidetes,47KR7@768503|Cytophagia	976|Bacteroidetes	E	Transglutaminase-like superfamily	-	-	-	-	-	-	-	-	-	-	-	-	DUF3857,Transglut_core
BYD3_k127_3930040_11	1279009.ADICEAN_04037	3.539e-170	541.0	COG2876@1|root,COG2876@2|Bacteria,4NDU4@976|Bacteroidetes,47K32@768503|Cytophagia	976|Bacteroidetes	E	chorismate mutase	pheB	-	5.4.99.5	ko:K04516	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	M00024,M00025	R01715	RC03116	ko00000,ko00001,ko00002,ko01000	-	-	-	CM_2,DAHP_synth_1
BYD3_k127_3930040_21	1279009.ADICEAN_04036	4.931e-100	334.0	COG0287@1|root,COG0287@2|Bacteria,4NEKF@976|Bacteroidetes,47N0Z@768503|Cytophagia	976|Bacteroidetes	E	Prephenate dehydrogenase	tyrA	-	1.3.1.12	ko:K04517	ko00400,ko00401,ko01100,ko01110,ko01130,ko01230,map00400,map00401,map01100,map01110,map01130,map01230	M00025	R01728	RC00125	ko00000,ko00001,ko00002,ko01000	-	-	-	PDH
BYD3_k127_3930040_14	643867.Ftrac_0292	1.08e-144	469.0	COG0436@1|root,COG0436@2|Bacteria,4NF2E@976|Bacteroidetes,47KXG@768503|Cytophagia	976|Bacteroidetes	E	PFAM Aminotransferase class I and II	dapL	-	2.6.1.83	ko:K10206,ko:K14261	ko00300,ko01100,ko01110,ko01130,ko01230,map00300,map01100,map01110,map01130,map01230	M00527	R07613	RC00006,RC01847	ko00000,ko00001,ko00002,ko01000,ko01007	-	-	-	Aminotran_1_2
BYD3_k127_3930040_22	468059.AUHA01000004_gene2387	9.987e-89	302.0	COG0077@1|root,COG0077@2|Bacteria,4NEEK@976|Bacteroidetes,1IQJU@117747|Sphingobacteriia	976|Bacteroidetes	E	Prephenate dehydratase	pheA	-	4.2.1.51	ko:K04518	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	M00024	R00691,R01373	RC00360	ko00000,ko00001,ko00002,ko01000	-	-	-	PDT
BYD3_k127_3930040_49	643867.Ftrac_3376	3.485e-12	72.0	2EG8H@1|root,33A0B@2|Bacteria,4NY1M@976|Bacteroidetes,47SNZ@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_3930040_7	866536.Belba_1887	5.903e-180	597.0	COG4886@1|root,COG4886@2|Bacteria	2|Bacteria	S	regulation of response to stimulus	-	-	-	-	-	-	-	-	-	-	-	-	LRR_6,LRR_8
BYD3_k127_3930040_8	1237149.C900_03998	7.366e-176	557.0	COG0404@1|root,COG0404@2|Bacteria,4NF7S@976|Bacteroidetes,47MN7@768503|Cytophagia	976|Bacteroidetes	E	The glycine cleavage system catalyzes the degradation of glycine	gcvT	-	2.1.2.10	ko:K00605	ko00260,ko00630,ko00670,ko01100,ko01110,ko01130,ko01200,map00260,map00630,map00670,map01100,map01110,map01130,map01200	M00532	R01221,R02300,R04125	RC00022,RC00069,RC00183,RC02834	ko00000,ko00001,ko00002,ko01000	-	-	-	GCV_T,GCV_T_C
BYD3_k127_3930040_50	153721.MYP_4697	3.57e-09	66.0	COG0457@1|root,COG0457@2|Bacteria,4NGGZ@976|Bacteroidetes,47JWQ@768503|Cytophagia	976|Bacteroidetes	S	TPR repeat-containing protein	-	-	-	-	-	-	-	-	-	-	-	-	TPR_1,TPR_11,TPR_16,TPR_2,TPR_8
BYD3_k127_3930040_24	1121373.KB903664_gene2550	9.167e-84	283.0	COG2045@1|root,COG2045@2|Bacteria,4NG1A@976|Bacteroidetes,47M1W@768503|Cytophagia	976|Bacteroidetes	H	Belongs to the ComB family	comB	-	3.1.3.71	ko:K05979	ko00680,ko01120,map00680,map01120	M00358	R05789	RC00428	ko00000,ko00001,ko00002,ko01000	-	-	-	2-ph_phosp
BYD3_k127_3930040_40	504472.Slin_3481	2.884e-48	174.0	COG1694@1|root,COG1694@2|Bacteria,4NQ3H@976|Bacteroidetes,47QEV@768503|Cytophagia	976|Bacteroidetes	S	PFAM MazG nucleotide pyrophosphohydrolase	ypjD	-	-	-	-	-	-	-	-	-	-	-	MazG
BYD3_k127_3930040_46	1123290.AUDQ01000001_gene2844	2.523e-26	124.0	COG0860@1|root,COG3103@1|root,COG0860@2|Bacteria,COG3103@2|Bacteria,1TR6H@1239|Firmicutes,4H9U6@91061|Bacilli,26CTR@186818|Planococcaceae	91061|Bacilli	M	N-acetylmuramoyl-L-alanine amidase	lytC_1	GO:0005575,GO:0005623,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0044464	3.5.1.28	ko:K01448	ko01503,map01503	M00727	R04112	RC00064,RC00141	ko00000,ko00001,ko00002,ko01000,ko01011,ko03036	-	-	-	Amidase_3,SH3_3,SLH
BYD3_k127_3930040_35	1408473.JHXO01000009_gene3265	2.168e-53	206.0	COG0739@1|root,COG4219@1|root,COG0739@2|Bacteria,COG4219@2|Bacteria,4NMKI@976|Bacteroidetes,2FYAB@200643|Bacteroidia	976|Bacteroidetes	KT	BlaR1 peptidase M56	-	-	-	-	-	-	-	-	-	-	-	-	POTRA,Peptidase_M23,Peptidase_M56
BYD3_k127_3930040_41	1408473.JHXO01000009_gene3264	4.317e-47	172.0	COG3682@1|root,COG3682@2|Bacteria,4NP4S@976|Bacteroidetes,2FUPG@200643|Bacteroidia	976|Bacteroidetes	K	Penicillinase repressor	-	-	-	-	-	-	-	-	-	-	-	-	Penicillinase_R
BYD3_k127_3930040_42	1237149.C900_05879	6.81e-47	172.0	COG0824@1|root,COG0824@2|Bacteria,4NT54@976|Bacteroidetes,47RRM@768503|Cytophagia	976|Bacteroidetes	S	Thioesterase-like superfamily	-	-	-	-	-	-	-	-	-	-	-	-	4HBT_2
BYD3_k127_3930040_26	981383.AEWH01000026_gene2846	6.981e-81	278.0	COG0122@1|root,COG0122@2|Bacteria,1TQAF@1239|Firmicutes,4HBYM@91061|Bacilli	91061|Bacilli	L	COG0122 3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase	alkA	-	3.2.2.21	ko:K01247,ko:K13529	ko03410,map03410	-	-	-	ko00000,ko00001,ko01000,ko03000,ko03400	-	-	-	AlkA_N,HhH-GPD,OGG_N
BYD3_k127_3930040_23	1406840.Q763_15430	2.869e-85	287.0	COG3826@1|root,COG3826@2|Bacteria,4NHVC@976|Bacteroidetes,1HYDK@117743|Flavobacteriia,2NU9R@237|Flavobacterium	976|Bacteroidetes	S	Oxygenase, catalysing oxidative methylation of damaged DNA	-	-	-	ko:K09990	-	-	-	-	ko00000	-	-	-	Oxygenase-NA
BYD3_k127_3930040_48	1144672.F966_01738	9.883e-19	88.0	COG2169@1|root,COG2169@2|Bacteria,1NBKB@1224|Proteobacteria,1SDGM@1236|Gammaproteobacteria,3NPG3@468|Moraxellaceae	1236|Gammaproteobacteria	F	Metal binding domain of Ada	-	-	-	-	-	-	-	-	-	-	-	-	Ada_Zn_binding
BYD3_k127_3930040_28	1042377.AFPJ01000051_gene33	1.306e-75	264.0	COG0491@1|root,COG0491@2|Bacteria,1MX4H@1224|Proteobacteria,1RYRB@1236|Gammaproteobacteria,46479@72275|Alteromonadaceae	1236|Gammaproteobacteria	S	COG0491 Zn-dependent hydrolases, including glyoxylases	-	-	-	-	-	-	-	-	-	-	-	-	Lactamase_B
BYD3_k127_3930040_20	929556.Solca_1220	3.54e-105	349.0	COG0350@1|root,COG2207@1|root,COG0350@2|Bacteria,COG2207@2|Bacteria,4NFYC@976|Bacteroidetes,1IP7V@117747|Sphingobacteriia	976|Bacteroidetes	K	6-O-methylguanine DNA methyltransferase, DNA binding domain	ada	-	2.1.1.63	ko:K10778	-	-	-	-	ko00000,ko01000,ko03000,ko03400	-	-	-	DNA_binding_1,HTH_18,Methyltransf_1N
BYD3_k127_3930040_39	1121904.ARBP01000005_gene4869	3.795e-49	182.0	2CDAN@1|root,3134Z@2|Bacteria,4NNX4@976|Bacteroidetes,47XNP@768503|Cytophagia	976|Bacteroidetes	S	Gluconate 2-dehydrogenase subunit 3	-	-	-	-	-	-	-	-	-	-	-	-	Gluconate_2-dh3
BYD3_k127_3930040_3	1121904.ARBP01000005_gene4868	7.712e-258	805.0	COG2303@1|root,COG2303@2|Bacteria,4NEF2@976|Bacteroidetes,47JQ2@768503|Cytophagia	976|Bacteroidetes	E	PFAM glucose-methanol-choline oxidoreductase	-	-	-	-	-	-	-	-	-	-	-	-	FAD_binding_2,GMC_oxred_C,GMC_oxred_N
BYD3_k127_3930040_5	1121904.ARBP01000002_gene7252	4.386e-244	779.0	COG0577@1|root,COG0577@2|Bacteria,4NDUK@976|Bacteroidetes,47JJN@768503|Cytophagia	976|Bacteroidetes	V	FtsX-like permease family	-	-	-	ko:K02004	-	M00258	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	FtsX,MacB_PCD
BYD3_k127_3930040_18	509635.N824_07005	1.035e-124	403.0	2BZ6M@1|root,2Z7HW@2|Bacteria,4NDZE@976|Bacteroidetes,1INP8@117747|Sphingobacteriia	976|Bacteroidetes	S	Domain of Unknown Function (DUF1080)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1080
BYD3_k127_3930040_9	1123248.KB893348_gene322	2.099e-174	555.0	COG2133@1|root,COG2133@2|Bacteria,4NF0B@976|Bacteroidetes	976|Bacteroidetes	G	glucose sorbosone	-	-	-	-	-	-	-	-	-	-	-	-	CBM_6,GSDH,Ig_2,Malectin,PKD,VCBS,fn3
BYD3_k127_3930040_33	1296416.JACB01000017_gene5141	1.443e-60	218.0	COG0500@1|root,COG2226@2|Bacteria,4PH0U@976|Bacteroidetes,1IHRF@117743|Flavobacteriia,2YIT4@290174|Aquimarina	976|Bacteroidetes	Q	Hypothetical methyltransferase	-	-	-	-	-	-	-	-	-	-	-	-	Methyltransf_11
BYD3_k127_3930040_34	1408433.JHXV01000015_gene1803	1.102e-55	211.0	COG0330@1|root,COG0330@2|Bacteria,4NHJA@976|Bacteroidetes,1HZ37@117743|Flavobacteriia	976|Bacteroidetes	O	SPFH domain / Band 7 family	-	-	-	-	-	-	-	-	-	-	-	-	Band_7
BYD3_k127_3930040_31	1157490.EL26_03330	1.131e-61	221.0	COG4886@1|root,COG4886@2|Bacteria,1UZ0W@1239|Firmicutes,4HEG3@91061|Bacilli	91061|Bacilli	S	Leucine Rich Repeat	-	-	-	-	-	-	-	-	-	-	-	-	LRR_8
BYD3_k127_3930040_19	761193.Runsl_0412	1.815e-109	358.0	2DB9P@1|root,2Z7Y1@2|Bacteria,4NHQN@976|Bacteroidetes,47M0R@768503|Cytophagia	976|Bacteroidetes	S	Domain of Unknown Function (DUF1080)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1080
BYD3_k127_3930040_51	643867.Ftrac_1599	3.294e-08	55.0	2BV0E@1|root,32QD0@2|Bacteria,4PBZ5@976|Bacteroidetes,47WJJ@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_3930040_30	926549.KI421517_gene521	9.019e-62	216.0	COG0346@1|root,COG0346@2|Bacteria,4NSC9@976|Bacteroidetes,47RDB@768503|Cytophagia	976|Bacteroidetes	E	Glyoxalase-like domain	-	-	4.4.1.5	ko:K01759	ko00620,map00620	-	R02530	RC00004,RC00740	ko00000,ko00001,ko01000	-	-	-	Glyoxalase
BYD3_k127_3930040_36	1267534.KB906758_gene2483	3.607e-53	193.0	COG2318@1|root,COG2318@2|Bacteria,3Y51S@57723|Acidobacteria,2JJG3@204432|Acidobacteriia	204432|Acidobacteriia	S	DinB superfamily	-	-	-	-	-	-	-	-	-	-	-	-	DinB_2
BYD3_k127_3930040_38	641143.HMPREF9331_00535	2.033e-52	192.0	COG0596@1|root,COG0596@2|Bacteria,4PKKR@976|Bacteroidetes,1IJBZ@117743|Flavobacteriia,1ERUP@1016|Capnocytophaga	976|Bacteroidetes	S	Alpha/beta hydrolase family	-	-	-	-	-	-	-	-	-	-	-	-	Abhydrolase_6,UPF0227
BYD3_k127_3930040_43	761193.Runsl_2513	5.382e-43	160.0	COG2755@1|root,COG2755@2|Bacteria,4NQAK@976|Bacteroidetes,47QQ7@768503|Cytophagia	976|Bacteroidetes	E	Stress responsive A/B Barrel Domain	-	-	-	-	-	-	-	-	-	-	-	-	Dabb
BYD3_k127_3930040_15	929562.Emtol_0722	5.347e-138	444.0	COG1082@1|root,COG1082@2|Bacteria,4NJ3Z@976|Bacteroidetes,47NJ6@768503|Cytophagia	976|Bacteroidetes	G	Xylose isomerase domain protein TIM barrel	-	-	-	-	-	-	-	-	-	-	-	-	AP_endonuc_2,TAT_signal
BYD3_k127_3930040_6	1356852.N008_14405	3.991e-232	732.0	COG0438@1|root,COG0438@2|Bacteria,4PKQN@976|Bacteroidetes,47K56@768503|Cytophagia	976|Bacteroidetes	M	PFAM glycogen synthase	-	-	2.4.1.11	ko:K00693	ko00500,ko01100,ko04151,ko04152,ko04910,ko04922,ko04931,map00500,map01100,map04151,map04152,map04910,map04922,map04931	-	R00292	RC00005	ko00000,ko00001,ko01000,ko01003	-	GT3	-	Glycogen_syn
BYD3_k127_3930040_1	1237149.C900_05882	0.0	1338.0	COG0542@1|root,COG0542@2|Bacteria,4NGEM@976|Bacteroidetes,47KA7@768503|Cytophagia	976|Bacteroidetes	O	Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE	clpB	-	-	ko:K03695	ko04213,map04213	-	-	-	ko00000,ko00001,ko03110	-	-	-	AAA,AAA_2,ClpB_D2-small,Clp_N
BYD3_k127_3930040_13	1048983.EL17_22865	5.321e-146	474.0	COG3746@1|root,COG3746@2|Bacteria,4NH24@976|Bacteroidetes,47K0B@768503|Cytophagia	976|Bacteroidetes	P	Phosphate-selective porin O and P	-	-	-	-	-	-	-	-	-	-	-	-	Porin_O_P
BYD3_k127_3930040_44	485918.Cpin_6204	2.056e-35	138.0	COG3682@1|root,COG3682@2|Bacteria,4NSQR@976|Bacteroidetes,1ISTV@117747|Sphingobacteriia	976|Bacteroidetes	K	Transcriptional repressor, CopY family	-	-	-	-	-	-	-	-	-	-	-	-	Penicillinase_R
BYD3_k127_3930040_37	1121904.ARBP01000009_gene4328	6.871e-53	199.0	COG4219@1|root,COG4219@2|Bacteria,4NKKC@976|Bacteroidetes,47JQV@768503|Cytophagia	976|Bacteroidetes	KT	PFAM Peptidase M56, BlaR1	-	-	-	-	-	-	-	-	-	-	-	-	Peptidase_M56
BYD3_k127_3939611_0	1144313.PMI10_02672	3.689e-281	877.0	COG3534@1|root,COG3534@2|Bacteria,4NGKW@976|Bacteroidetes,1HZE9@117743|Flavobacteriia,2NV03@237|Flavobacterium	976|Bacteroidetes	G	Alpha-L-arabinofuranosidase	-	-	-	-	-	-	-	-	-	-	-	-	Alpha-L-AF_C,CBM_4_9
BYD3_k127_3939611_2	925409.KI911562_gene241	4.205e-107	351.0	COG1051@1|root,COG1051@2|Bacteria,4NH28@976|Bacteroidetes,1IP93@117747|Sphingobacteriia	976|Bacteroidetes	F	Nudix hydrolase	-	-	-	-	-	-	-	-	-	-	-	-	NUDIX
BYD3_k127_3939611_1	1191523.MROS_0031	6.75e-216	676.0	COG4146@1|root,COG4146@2|Bacteria	2|Bacteria	S	symporter activity	-	-	-	ko:K03307	-	-	-	-	ko00000	2.A.21	-	-	SSF
BYD3_k127_4018929_0	1121875.KB907551_gene970	1.724e-155	499.0	COG1649@1|root,COG1649@2|Bacteria	2|Bacteria	F	PFAM Uncharacterised BCR, COG1649	-	-	-	-	-	-	-	-	-	-	-	-	GHL10,Polysacc_deac_1
BYD3_k127_4018929_1	1506583.JQJY01000009_gene881	9.007e-52	187.0	COG2764@1|root,COG2764@2|Bacteria,4NQD7@976|Bacteroidetes,1I2AQ@117743|Flavobacteriia,2NW94@237|Flavobacterium	976|Bacteroidetes	S	Glyoxalase	-	-	-	ko:K04750	-	-	-	-	ko00000	-	-	-	3-dmu-9_3-mt
BYD3_k127_4018929_2	1202532.FF52_13571	6.656e-14	78.0	2EIJH@1|root,33CAU@2|Bacteria,4PD0M@976|Bacteroidetes,1IDIN@117743|Flavobacteriia,2NYIG@237|Flavobacterium	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_4048778_4	1185876.BN8_01430	1.661e-24	110.0	COG0577@1|root,COG0577@2|Bacteria,4NDUK@976|Bacteroidetes,47JJN@768503|Cytophagia	976|Bacteroidetes	V	FtsX-like permease family	-	-	-	-	-	-	-	-	-	-	-	-	FtsX,MacB_PCD
BYD3_k127_4048778_3	626887.J057_00070	3.025e-28	123.0	COG0500@1|root,COG2226@2|Bacteria	2|Bacteria	Q	methyltransferase	-	-	2.1.1.163,2.1.1.201	ko:K03183	ko00130,ko01100,ko01110,map00130,map01100,map01110	M00116,M00117	R04990,R04993,R06859,R08774,R09736	RC00003,RC01253,RC01662	ko00000,ko00001,ko00002,ko01000	-	-	-	Methyltransf_11,Methyltransf_25
BYD3_k127_4048778_0	1239962.C943_00386	2.049e-268	848.0	COG0577@1|root,COG0577@2|Bacteria,4NDUK@976|Bacteroidetes,47JJN@768503|Cytophagia	976|Bacteroidetes	V	FtsX-like permease family	-	-	-	-	-	-	-	-	-	-	-	-	FtsX,MacB_PCD
BYD3_k127_4048778_1	714943.Mucpa_2156	7.031e-186	608.0	COG0577@1|root,COG0577@2|Bacteria,4NDUK@976|Bacteroidetes,1IPB0@117747|Sphingobacteriia	976|Bacteroidetes	V	ABC-type antimicrobial peptide transport system, permease component	-	-	-	ko:K02004	-	M00258	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	FtsX,MacB_PCD
BYD3_k127_4048778_6	1210884.HG799465_gene11728	2.762e-10	61.0	COG0491@1|root,COG0491@2|Bacteria,2J1E5@203682|Planctomycetes	203682|Planctomycetes	S	Metallo-beta-lactamase superfamily	-	-	-	-	-	-	-	-	-	-	-	-	Lactamase_B
BYD3_k127_4048778_2	1131730.BAVI_14801	5.135e-100	335.0	COG0673@1|root,COG0673@2|Bacteria,1UZRV@1239|Firmicutes,4HEWB@91061|Bacilli,1ZE5A@1386|Bacillus	91061|Bacilli	S	dehydrogenases and related proteins	ysjB	-	-	ko:K03810	-	-	-	-	ko00000	-	-	-	GFO_IDH_MocA
BYD3_k127_4048778_5	1123276.KB893255_gene1812	1.127e-22	97.0	COG1472@1|root,COG1472@2|Bacteria,4NE90@976|Bacteroidetes,47KIX@768503|Cytophagia	976|Bacteroidetes	G	Glycosyl hydrolase family 3 C-terminal domain	-	-	3.2.1.21	ko:K05349	ko00460,ko00500,ko00940,ko01100,ko01110,map00460,map00500,map00940,map01100,map01110	-	R00026,R02558,R02887,R02985,R03527,R04949,R04998,R10035,R10039,R10040	RC00049,RC00059,RC00171,RC00262,RC00397,RC00451,RC00714,RC00746,RC01248	ko00000,ko00001,ko01000	-	GH3	-	F5_F8_type_C,Fn3-like,Glyco_hydro_3,Glyco_hydro_3_C,fn3
BYD3_k127_4142466_0	1047013.AQSP01000113_gene740	4.382e-158	507.0	COG1472@1|root,COG1472@2|Bacteria,2NNR4@2323|unclassified Bacteria	2|Bacteria	G	Fibronectin type III-like domain	-	-	3.2.1.21	ko:K05349	ko00460,ko00500,ko00940,ko01100,ko01110,map00460,map00500,map00940,map01100,map01110	-	R00026,R02558,R02887,R02985,R03527,R04949,R04998,R10035,R10039,R10040	RC00049,RC00059,RC00171,RC00262,RC00397,RC00451,RC00714,RC00746,RC01248	ko00000,ko00001,ko01000	-	GH3	-	Fn3-like,Glyco_hydro_3,Glyco_hydro_3_C,PA14
BYD3_k127_4142466_1	153721.MYP_276	7.168e-28	119.0	COG0784@1|root,COG0784@2|Bacteria,4PKNR@976|Bacteroidetes,47XXN@768503|Cytophagia	976|Bacteroidetes	T	cheY-homologous receiver domain	-	-	-	-	-	-	-	-	-	-	-	-	Response_reg
BYD3_k127_4142466_2	929556.Solca_0435	2.95e-12	69.0	2BWZA@1|root,32RGQ@2|Bacteria,4NQBI@976|Bacteroidetes,1ITP6@117747|Sphingobacteriia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_4153149_4	1227739.Hsw_1327	6.579e-08	54.0	COG0154@1|root,COG0154@2|Bacteria,4NF8C@976|Bacteroidetes,47MMB@768503|Cytophagia	976|Bacteroidetes	J	Amidase	gatA	-	3.5.1.4	ko:K01426	ko00330,ko00360,ko00380,ko00627,ko00643,ko01120,map00330,map00360,map00380,map00627,map00643,map01120	-	R02540,R03096,R03180,R03909,R05551,R05590	RC00010,RC00100,RC00950,RC01025	ko00000,ko00001,ko01000	-	-	-	Amidase
BYD3_k127_4153149_3	1408433.JHXV01000014_gene3681	1.461e-10	66.0	COG2849@1|root,COG2849@2|Bacteria,4PC8C@976|Bacteroidetes,1IMSS@117743|Flavobacteriia,2PC0R@246874|Cryomorphaceae	976|Bacteroidetes	S	repeat protein	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_4153149_0	926549.KI421517_gene76	0.0	1013.0	COG4993@1|root,COG4993@2|Bacteria,4NINH@976|Bacteroidetes,47MZW@768503|Cytophagia	976|Bacteroidetes	G	PQQ-like domain	-	-	1.1.5.2	ko:K00117	ko00030,ko01100,ko01110,ko01130,map00030,map01100,map01110,map01130	-	R06620	RC00066	ko00000,ko00001,ko01000	-	-	-	Cytochrome_CBB3,PQQ,PQQ_2
BYD3_k127_4153149_2	761193.Runsl_2277	3.636e-93	317.0	COG3325@1|root,COG3325@2|Bacteria,4NNUM@976|Bacteroidetes,47PUW@768503|Cytophagia	976|Bacteroidetes	G	Glycoside hydrolase family	-	-	3.2.1.14	ko:K01183	ko00520,ko01100,map00520,map01100	-	R01206,R02334	RC00467	ko00000,ko00001,ko01000	-	GH18	-	Glyco_hydro_18
BYD3_k127_4153149_1	113395.AXAI01000053_gene2640	1.712e-309	985.0	COG0507@1|root,COG1112@1|root,COG2251@1|root,COG0507@2|Bacteria,COG1112@2|Bacteria,COG2251@2|Bacteria,1MWW9@1224|Proteobacteria,2TTSD@28211|Alphaproteobacteria,3JQNN@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	L	AAA domain	-	-	-	-	-	-	-	-	-	-	-	-	AAA_11,AAA_12,AAA_30,RNase_H_2
BYD3_k127_4235153_3	1124780.ANNU01000040_gene398	1.568e-43	160.0	COG2877@1|root,COG2877@2|Bacteria,4NENN@976|Bacteroidetes,47M8B@768503|Cytophagia	976|Bacteroidetes	M	Belongs to the KdsA family	kdsA	-	2.5.1.55	ko:K01627	ko00540,ko01100,map00540,map01100	M00063	R03254	RC00435	ko00000,ko00001,ko00002,ko01000,ko01005	-	-	-	DAHP_synth_1
BYD3_k127_4235153_0	1288963.ADIS_0290	5.469e-167	543.0	COG0471@1|root,COG0569@1|root,COG0471@2|Bacteria,COG0569@2|Bacteria,4NF52@976|Bacteroidetes,47NEH@768503|Cytophagia	976|Bacteroidetes	P	COGs COG0471 Di- and tricarboxylate transporter	-	-	-	-	-	-	-	-	-	-	-	-	CitMHS,TrkA_C
BYD3_k127_4235153_2	1305737.JAFX01000001_gene770	1.496e-74	256.0	COG0529@1|root,COG0529@2|Bacteria,4NGCU@976|Bacteroidetes,47NAS@768503|Cytophagia	976|Bacteroidetes	P	Catalyzes the synthesis of activated sulfate	cysC	GO:0003674,GO:0003824,GO:0004020,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0044237	2.7.1.25	ko:K00860	ko00230,ko00920,ko01100,ko01120,map00230,map00920,map01100,map01120	M00176	R00509,R04928	RC00002,RC00078	ko00000,ko00001,ko00002,ko01000	-	-	-	APS_kinase
BYD3_k127_4235153_1	1288963.ADIS_0288	3.472e-164	519.0	COG0175@1|root,COG0175@2|Bacteria,4NEPD@976|Bacteroidetes,47JCC@768503|Cytophagia	976|Bacteroidetes	EH	TIGRFAM sulfate adenylyltransferase, small subunit	cysD	-	2.7.7.4	ko:K00957	ko00230,ko00261,ko00450,ko00920,ko01100,ko01120,ko01130,map00230,map00261,map00450,map00920,map01100,map01120,map01130	M00176,M00596	R00529,R04929	RC02809,RC02889	ko00000,ko00001,ko00002,ko01000	-	-	-	PAPS_reduct
BYD3_k127_4264583_0	1305737.JAFX01000001_gene772	1.084e-178	564.0	COG2895@1|root,COG2895@2|Bacteria,4NETI@976|Bacteroidetes,47KGK@768503|Cytophagia	976|Bacteroidetes	P	Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN NodQ subfamily	cysN	-	2.7.1.25,2.7.7.4	ko:K00955,ko:K00956	ko00230,ko00261,ko00450,ko00920,ko01100,ko01120,ko01130,map00230,map00261,map00450,map00920,map01100,map01120,map01130	M00176,M00596	R00509,R00529,R04928,R04929	RC00002,RC00078,RC02809,RC02889	ko00000,ko00001,ko00002,ko01000	-	-	-	GTP_EFTU
BYD3_k127_4264583_2	1121904.ARBP01000003_gene6602	4.044e-88	297.0	COG1218@1|root,COG1218@2|Bacteria,4NFHY@976|Bacteroidetes,47PAU@768503|Cytophagia	976|Bacteroidetes	P	Inositol monophosphatase family	cysQ	-	3.1.3.7	ko:K01082	ko00920,ko01100,ko01120,ko01130,map00920,map01100,map01120,map01130	-	R00188,R00508	RC00078	ko00000,ko00001,ko01000,ko03016	-	-	-	Inositol_P
BYD3_k127_4264583_3	929713.NIASO_07090	1.972e-54	194.0	COG1943@1|root,COG1943@2|Bacteria,4NNFK@976|Bacteroidetes,1ITJ7@117747|Sphingobacteriia	976|Bacteroidetes	L	Transposase IS200 like	-	-	-	-	-	-	-	-	-	-	-	-	Y1_Tnp
BYD3_k127_4264583_1	391596.PBAL39_11972	4.37e-139	449.0	COG0451@1|root,COG0451@2|Bacteria,4NDV4@976|Bacteroidetes,1IQ44@117747|Sphingobacteriia	976|Bacteroidetes	GM	Catalyzes the two-step NADP-dependent conversion of GDP- 4-dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction	fcl	-	1.1.1.271	ko:K02377	ko00051,ko00520,ko01100,map00051,map00520,map01100	-	R05692	RC01014	ko00000,ko00001,ko01000	-	-	-	Epimerase
BYD3_k127_4264583_4	153721.MYP_999	9.082e-51	181.0	COG1089@1|root,COG1089@2|Bacteria,4NEB6@976|Bacteroidetes,47K8D@768503|Cytophagia	976|Bacteroidetes	M	Catalyzes the conversion of GDP-D-mannose to GDP-4- dehydro-6-deoxy-D-mannose	gmd	-	4.2.1.47	ko:K01711	ko00051,ko00520,ko01100,map00051,map00520,map01100	-	R00888	RC00402	ko00000,ko00001,ko01000	-	-	-	GDP_Man_Dehyd
BYD3_k127_4298989_32	153721.MYP_3400	1.168e-55	205.0	COG0671@1|root,COG0671@2|Bacteria,4NJEX@976|Bacteroidetes,47QUQ@768503|Cytophagia	976|Bacteroidetes	I	Acid phosphatase homologues	-	-	-	-	-	-	-	-	-	-	-	-	PAP2
BYD3_k127_4298989_13	1121904.ARBP01000004_gene799	1.704e-173	554.0	COG3211@1|root,COG3211@2|Bacteria,4NKFU@976|Bacteroidetes,47P4I@768503|Cytophagia	976|Bacteroidetes	S	Bacterial protein of unknown function (DUF839)	-	-	-	ko:K07093	-	-	-	-	ko00000	-	-	-	DUF839
BYD3_k127_4298989_22	869213.JCM21142_73000	7.068e-98	331.0	COG0607@1|root,COG0607@2|Bacteria,4PKKB@976|Bacteroidetes,47KX1@768503|Cytophagia	976|Bacteroidetes	P	Phosphoinositide phospholipase C, Ca2+-dependent	-	-	-	-	-	-	-	-	-	-	-	-	PI-PLC-C1
BYD3_k127_4298989_11	1123277.KB893175_gene1416	6.308e-188	602.0	COG2010@1|root,COG2133@1|root,COG2010@2|Bacteria,COG2133@2|Bacteria,4NIKG@976|Bacteroidetes,47MEK@768503|Cytophagia	976|Bacteroidetes	C	Glucose / Sorbosone dehydrogenase	-	-	-	-	-	-	-	-	-	-	-	-	Cytochrom_C,GSDH
BYD3_k127_4298989_38	388413.ALPR1_05395	3.031e-28	122.0	COG1266@1|root,COG1266@2|Bacteria,4NPEG@976|Bacteroidetes	976|Bacteroidetes	S	CAAX protease self-immunity	-	-	-	ko:K07052	-	-	-	-	ko00000	-	-	-	Abi
BYD3_k127_4298989_0	1288963.ADIS_1943	0.0	1347.0	COG0247@1|root,COG0277@1|root,COG0247@2|Bacteria,COG0277@2|Bacteria,4NEK3@976|Bacteroidetes,47JNC@768503|Cytophagia	976|Bacteroidetes	C	FAD linked oxidases, C-terminal domain	-	-	-	-	-	-	-	-	-	-	-	-	CCG,FAD-oxidase_C,FAD_binding_4,Fer4_17,Fer4_8
BYD3_k127_4298989_6	1123278.KB893574_gene6159	8.873e-275	854.0	COG1620@1|root,COG1620@2|Bacteria,4NHVH@976|Bacteroidetes,47Q1C@768503|Cytophagia	976|Bacteroidetes	C	L-lactate permease	lctP	-	-	ko:K03303	-	-	-	-	ko00000,ko02000	2.A.14	-	-	Lactate_perm
BYD3_k127_4298989_3	1123277.KB893176_gene3687	1.548e-320	989.0	COG2225@1|root,COG2225@2|Bacteria,4NF5H@976|Bacteroidetes,47JKU@768503|Cytophagia	976|Bacteroidetes	C	Malate synthase	-	-	2.3.3.9	ko:K01638	ko00620,ko00630,ko01100,ko01110,ko01120,ko01200,map00620,map00630,map01100,map01110,map01120,map01200	M00012	R00472	RC00004,RC00308,RC02747	ko00000,ko00001,ko00002,ko01000	-	-	-	Malate_synthase
BYD3_k127_4298989_23	471854.Dfer_1353	1.98e-96	320.0	COG0262@1|root,COG0262@2|Bacteria,4NPV0@976|Bacteroidetes,47QWD@768503|Cytophagia	976|Bacteroidetes	H	RibD C-terminal domain	-	-	-	-	-	-	-	-	-	-	-	-	RibD_C
BYD3_k127_4298989_15	1434325.AZQN01000009_gene4000	6.443e-135	438.0	COG4409@1|root,COG4692@1|root,COG4409@2|Bacteria,COG4692@2|Bacteria,4NE1P@976|Bacteroidetes,47TDC@768503|Cytophagia	976|Bacteroidetes	G	BNR repeat-like domain	-	-	-	-	-	-	-	-	-	-	-	-	BNR_2
BYD3_k127_4298989_42	1150600.ADIARSV_4202	8.736e-08	62.0	2EIW1@1|root,33CMB@2|Bacteria,4NZ48@976|Bacteroidetes,1IUIK@117747|Sphingobacteriia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_4298989_16	497964.CfE428DRAFT_4785	8.153e-129	442.0	COG1680@1|root,COG1680@2|Bacteria,46T7M@74201|Verrucomicrobia	74201|Verrucomicrobia	V	Beta-lactamase	-	-	-	-	-	-	-	-	-	-	-	-	Beta-lactamase
BYD3_k127_4298989_9	714943.Mucpa_7156	4.171e-203	643.0	COG1524@1|root,COG1524@2|Bacteria	2|Bacteria	S	mannose-ethanolamine phosphotransferase activity	-	-	-	-	-	-	-	-	-	-	-	-	Phosphodiest
BYD3_k127_4298989_27	471854.Dfer_2053	5.688e-81	280.0	COG0226@1|root,COG0226@2|Bacteria,4NHTF@976|Bacteroidetes,47UTM@768503|Cytophagia	976|Bacteroidetes	P	Part of the ABC transporter complex PstSACB involved in phosphate import	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_4298989_1	485918.Cpin_2250	0.0	1292.0	COG4774@1|root,COG4774@2|Bacteria,4PKB8@976|Bacteroidetes,1J0MI@117747|Sphingobacteriia	976|Bacteroidetes	P	TonB dependent receptor	-	-	-	ko:K02014	-	-	-	-	ko00000,ko02000	1.B.14	-	-	CarbopepD_reg_2,Plug,TonB_dep_Rec
BYD3_k127_4298989_7	56107.Cylst_2852	9.144e-240	756.0	COG1523@1|root,COG1523@2|Bacteria,1GQ8U@1117|Cyanobacteria,1HQVF@1161|Nostocales	1117|Cyanobacteria	G	alpha amylase, C-terminal all-beta	-	-	-	-	-	-	-	-	-	-	-	-	Alpha-amylase
BYD3_k127_4298989_40	1124780.ANNU01000069_gene1089	4.393e-20	104.0	COG0526@1|root,COG0526@2|Bacteria,4NH2A@976|Bacteroidetes,47QY9@768503|Cytophagia	976|Bacteroidetes	CO	Redoxin	-	-	-	-	-	-	-	-	-	-	-	-	AhpC-TSA,DUF4369,Redoxin,Thioredoxin_8
BYD3_k127_4298989_39	869210.Marky_1921	2.447e-27	117.0	COG0517@1|root,COG5485@1|root,COG0517@2|Bacteria,COG5485@2|Bacteria,1WK3F@1297|Deinococcus-Thermus	1297|Deinococcus-Thermus	S	Domain in cystathionine beta-synthase and other proteins.	-	-	-	-	-	-	-	-	-	-	-	-	CBS
BYD3_k127_4298989_21	616991.JPOO01000001_gene3360	2.919e-98	329.0	COG2207@1|root,COG2207@2|Bacteria,4PI6R@976|Bacteroidetes,1IG3A@117743|Flavobacteriia,23IGX@178469|Arenibacter	976|Bacteroidetes	K	helix_turn_helix, arabinose operon control protein	-	-	-	-	-	-	-	-	-	-	-	-	HTH_18
BYD3_k127_4298989_34	880071.Fleli_0987	6.927e-41	157.0	COG3205@1|root,COG3205@2|Bacteria,4NV6E@976|Bacteroidetes,47SXF@768503|Cytophagia	976|Bacteroidetes	S	Predicted membrane protein (DUF2061)	-	-	-	-	-	-	-	-	-	-	-	-	DUF2061
BYD3_k127_4298989_37	1034807.FBFL15_0838	5.97e-29	121.0	2DNSK@1|root,32YXM@2|Bacteria,4P2C6@976|Bacteroidetes,1I8TN@117743|Flavobacteriia	976|Bacteroidetes	S	Domain of unknown function (DUF4259)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4259
BYD3_k127_4298989_12	926549.KI421517_gene1815	4.149e-181	575.0	COG1680@1|root,COG1680@2|Bacteria,4NGZR@976|Bacteroidetes,47M6K@768503|Cytophagia	976|Bacteroidetes	V	Beta-lactamase class C and other penicillin binding	-	-	-	-	-	-	-	-	-	-	-	-	Beta-lactamase
BYD3_k127_4298989_4	1123248.KB893348_gene328	1.532e-305	943.0	COG2303@1|root,COG2303@2|Bacteria,4NEHP@976|Bacteroidetes	976|Bacteroidetes	E	Oxidoreductase	-	-	-	-	-	-	-	-	-	-	-	-	FAD_binding_2,GMC_oxred_C,GMC_oxred_N
BYD3_k127_4298989_33	1121007.AUML01000001_gene1306	1.69e-42	168.0	COG1506@1|root,COG1506@2|Bacteria,4NKM9@976|Bacteroidetes,1I0MY@117743|Flavobacteriia,2YKM2@290174|Aquimarina	976|Bacteroidetes	E	X-Pro dipeptidyl-peptidase (S15 family)	-	-	-	-	-	-	-	-	-	-	-	-	Peptidase_S9
BYD3_k127_4298989_35	504472.Slin_0933	6.979e-31	124.0	COG1695@1|root,COG1695@2|Bacteria,4NQJP@976|Bacteroidetes,47QZJ@768503|Cytophagia	976|Bacteroidetes	K	Transcriptional regulator PadR-like family	-	-	-	-	-	-	-	-	-	-	-	-	PadR
BYD3_k127_4298989_19	1123277.KB893173_gene1676	5.636e-115	402.0	COG0577@1|root,COG0577@2|Bacteria,4NDUK@976|Bacteroidetes,47JJN@768503|Cytophagia	976|Bacteroidetes	V	FtsX-like permease family	-	-	-	-	-	-	-	-	-	-	-	-	FtsX,MacB_PCD
BYD3_k127_4298989_25	1033810.HLPCO_002522	1.392e-90	307.0	arCOG06802@1|root,31EN6@2|Bacteria,2NRUP@2323|unclassified Bacteria	2|Bacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_4298989_17	1121904.ARBP01000014_gene137	2.19e-123	404.0	COG3802@1|root,COG3802@2|Bacteria,4NGIM@976|Bacteroidetes,47TKS@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_4298989_14	1166018.FAES_3514	6.099e-138	452.0	COG0671@1|root,COG0671@2|Bacteria,4NF9W@976|Bacteroidetes,47M2K@768503|Cytophagia	976|Bacteroidetes	I	PFAM Phosphatidic acid phosphatase type 2 haloperoxidase	-	-	-	-	-	-	-	-	-	-	-	-	PAP2
BYD3_k127_4298989_5	714943.Mucpa_0160	3.354e-298	922.0	COG0129@1|root,COG0129@2|Bacteria,4NEKY@976|Bacteroidetes,1IQEN@117747|Sphingobacteriia	976|Bacteroidetes	EG	Belongs to the IlvD Edd family	-	-	-	-	-	-	-	-	-	-	-	-	ILVD_EDD
BYD3_k127_4298989_28	1341155.FSS13T_16960	2.282e-77	261.0	COG0454@1|root,COG0456@2|Bacteria,4NMCW@976|Bacteroidetes,1I2KA@117743|Flavobacteriia,2NUZ9@237|Flavobacterium	976|Bacteroidetes	K	Acetyltransferase (GNAT) domain	-	-	-	-	-	-	-	-	-	-	-	-	Acetyltransf_1,Acetyltransf_10
BYD3_k127_4298989_24	929556.Solca_3586	3.614e-94	316.0	COG0596@1|root,COG0596@2|Bacteria,4NJSG@976|Bacteroidetes,1IPDV@117747|Sphingobacteriia	976|Bacteroidetes	S	Alpha beta hydrolase	-	-	-	-	-	-	-	-	-	-	-	-	Abhydrolase_1
BYD3_k127_4298989_10	929713.NIASO_04530	1.177e-202	636.0	COG3876@1|root,COG3876@2|Bacteria,4NEXD@976|Bacteroidetes,1INZD@117747|Sphingobacteriia	976|Bacteroidetes	S	PFAM Uncharacterised conserved protein UCP016719	-	-	-	-	-	-	-	-	-	-	-	-	DUF1343
BYD3_k127_4298989_18	1237149.C900_05943	9.26e-123	405.0	COG0681@1|root,COG0681@2|Bacteria,4NFTP@976|Bacteroidetes,47JH7@768503|Cytophagia	976|Bacteroidetes	U	Belongs to the peptidase S26 family	lepB	-	3.4.21.89	ko:K03100	ko02024,ko03060,map02024,map03060	-	-	-	ko00000,ko00001,ko01000,ko01002	-	-	-	Peptidase_S24,Peptidase_S26
BYD3_k127_4298989_31	388413.ALPR1_02310	9.059e-57	209.0	COG3485@1|root,COG3485@2|Bacteria,4NDXN@976|Bacteroidetes,47M90@768503|Cytophagia	976|Bacteroidetes	Q	Protocatechuate 3,4-dioxygenase beta subunit N terminal	-	-	1.13.11.3	ko:K00449	ko00362,ko00624,ko01100,ko01120,ko01220,map00362,map00624,map01100,map01120,map01220	-	R01631,R03549	RC00388,RC00953	br01602,ko00000,ko00001,ko01000	-	-	-	Dioxygenase_C,PCDO_beta_N
BYD3_k127_4298989_2	926549.KI421517_gene8	0.0	1050.0	COG0612@1|root,COG0612@2|Bacteria,4NDXM@976|Bacteroidetes,47JU2@768503|Cytophagia	976|Bacteroidetes	S	Belongs to the peptidase M16 family	-	-	-	-	-	-	-	-	-	-	-	-	Peptidase_M16,Peptidase_M16_C
BYD3_k127_4298989_8	1341181.FLJC2902T_25260	3.278e-232	742.0	COG0421@1|root,COG0421@2|Bacteria,4NTHI@976|Bacteroidetes,1IDKX@117743|Flavobacteriia,2NYQ7@237|Flavobacterium	976|Bacteroidetes	E	Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_4298989_26	1107311.Q767_08845	7.676e-87	293.0	COG2518@1|root,COG2518@2|Bacteria,4NMTP@976|Bacteroidetes,1I1EU@117743|Flavobacteriia,2NYPM@237|Flavobacterium	976|Bacteroidetes	J	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins	-	-	2.1.1.77	ko:K00573	-	-	-	-	ko00000,ko01000	-	-	-	PCMT
BYD3_k127_4298989_20	926549.KI421517_gene1735	6.243e-101	331.0	28KW5@1|root,2ZACI@2|Bacteria,4P15K@976|Bacteroidetes	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_4298989_41	1492737.FEM08_21720	6.942e-13	78.0	2FD2D@1|root,3454V@2|Bacteria,4P66V@976|Bacteroidetes,1IDWK@117743|Flavobacteriia,2NZD3@237|Flavobacterium	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_4298989_36	760192.Halhy_0057	1.357e-30	123.0	2FCGD@1|root,344JU@2|Bacteria,4P6KV@976|Bacteroidetes,1IZ55@117747|Sphingobacteriia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_4298989_30	697282.Mettu_3960	1.177e-57	212.0	COG0596@1|root,COG0596@2|Bacteria,1PGPS@1224|Proteobacteria,1RX1V@1236|Gammaproteobacteria,1XGS4@135618|Methylococcales	135618|Methylococcales	S	PFAM Alpha beta hydrolase fold-1	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_4298989_29	743722.Sph21_1288	6.725e-67	238.0	COG2819@1|root,COG2819@2|Bacteria,4NGNJ@976|Bacteroidetes,1IZNR@117747|Sphingobacteriia	976|Bacteroidetes	S	Putative esterase	-	-	-	ko:K07017	-	-	-	-	ko00000	-	-	-	Esterase
BYD3_k127_4357263_3	1237149.C900_00383	7.494e-80	271.0	COG0086@1|root,COG0086@2|Bacteria,4NG2I@976|Bacteroidetes,47Y4X@768503|Cytophagia	976|Bacteroidetes	K	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates	-	-	-	-	-	-	-	-	-	-	-	-	OMP_b-brl_2
BYD3_k127_4357263_1	1237149.C900_04820	2.048e-88	295.0	COG1309@1|root,COG1309@2|Bacteria,4NMN2@976|Bacteroidetes	976|Bacteroidetes	K	transcriptional regulator	-	-	-	-	-	-	-	-	-	-	-	-	TetR_C_4,TetR_C_5,TetR_N
BYD3_k127_4357263_6	714943.Mucpa_4533	5.764e-32	130.0	COG0454@1|root,COG0456@2|Bacteria,4NURB@976|Bacteroidetes,1IU7H@117747|Sphingobacteriia	976|Bacteroidetes	K	DinB superfamily	-	-	-	-	-	-	-	-	-	-	-	-	DinB_2
BYD3_k127_4357263_7	1124780.ANNU01000021_gene3021	4.691e-12	75.0	2EKQA@1|root,33EE3@2|Bacteria,4NYQM@976|Bacteroidetes,47T4Z@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_4357263_0	1123248.KB893359_gene2071	1.078e-114	376.0	COG1432@1|root,COG1432@2|Bacteria,4NGF1@976|Bacteroidetes,1IRKK@117747|Sphingobacteriia	976|Bacteroidetes	S	OST-HTH/LOTUS domain	-	-	-	-	-	-	-	-	-	-	-	-	NYN,OST-HTH
BYD3_k127_4357263_2	1237149.C900_02210	1.347e-82	287.0	COG1388@1|root,COG1388@2|Bacteria,4NG96@976|Bacteroidetes,47NR5@768503|Cytophagia	976|Bacteroidetes	M	PFAM LysM domain	lysM	-	-	-	-	-	-	-	-	-	-	-	ANF_receptor,LysM,Peripla_BP_6
BYD3_k127_4357263_5	313606.M23134_03042	1.65e-36	148.0	2DJDC@1|root,32UCS@2|Bacteria,4NTR3@976|Bacteroidetes,47RMX@768503|Cytophagia	976|Bacteroidetes	S	Domain of unknown function (DUF4905)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4905
BYD3_k127_4357263_4	1237149.C900_02212	4.436e-39	149.0	COG1030@1|root,COG1030@2|Bacteria,4NGGV@976|Bacteroidetes,47MQR@768503|Cytophagia	976|Bacteroidetes	O	Membrane-bound serine protease (ClpP class)	-	-	-	ko:K07403	-	-	-	-	ko00000	-	-	-	NfeD,Peptidase_S49,SDH_sah
BYD3_k127_441881_33	926549.KI421517_gene806	1.358e-40	150.0	COG0662@1|root,COG3837@1|root,COG0662@2|Bacteria,COG3837@2|Bacteria,4NHX8@976|Bacteroidetes,47UCJ@768503|Cytophagia	976|Bacteroidetes	G	Cupin domain	-	-	-	-	-	-	-	-	-	-	-	-	Cupin_2
BYD3_k127_441881_23	1120965.AUBV01000015_gene1058	4.283e-58	217.0	COG5337@1|root,COG5337@2|Bacteria,4P3EE@976|Bacteroidetes	976|Bacteroidetes	M	CotH kinase protein	-	-	-	ko:K06330	-	-	-	-	ko00000	-	-	-	CotH
BYD3_k127_441881_14	1121007.AUML01000008_gene1038	8.831e-113	370.0	COG2207@1|root,COG2207@2|Bacteria,4NMQR@976|Bacteroidetes,1I1QC@117743|Flavobacteriia,2YITV@290174|Aquimarina	976|Bacteroidetes	K	helix_turn_helix, arabinose operon control protein	-	-	-	-	-	-	-	-	-	-	-	-	AraC_binding,HTH_18
BYD3_k127_441881_37	485918.Cpin_5627	1.575e-19	89.0	COG3224@1|root,COG3224@2|Bacteria,4P7R6@976|Bacteroidetes,1IZSY@117747|Sphingobacteriia	976|Bacteroidetes	S	Antibiotic biosynthesis monooxygenase	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_441881_9	760192.Halhy_2667	5.66e-145	465.0	COG0492@1|root,COG0492@2|Bacteria,4NEC8@976|Bacteroidetes,1IR3C@117747|Sphingobacteriia	976|Bacteroidetes	C	PFAM FAD-dependent pyridine nucleotide-disulphide oxidoreductase	-	-	-	-	-	-	-	-	-	-	-	-	Pyr_redox_2
BYD3_k127_441881_12	886379.AEWI01000014_gene1422	1.798e-125	415.0	COG4908@1|root,COG4908@2|Bacteria,4P25W@976|Bacteroidetes,2FWM2@200643|Bacteroidia,3XIQK@558415|Marinilabiliaceae	976|Bacteroidetes	S	Psort location Cytoplasmic, score	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_441881_38	1469948.JPNB01000001_gene1027	1.12e-12	77.0	2EFH0@1|root,2ZA40@2|Bacteria,1V0W1@1239|Firmicutes,24BY4@186801|Clostridia,36RF8@31979|Clostridiaceae	186801|Clostridia	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_441881_19	1122621.ATZA01000040_gene2477	1.49e-84	289.0	COG0657@1|root,COG0657@2|Bacteria,4NHZZ@976|Bacteroidetes,1IZ0F@117747|Sphingobacteriia	976|Bacteroidetes	I	Steryl acetyl hydrolase	-	-	3.1.1.83	ko:K14731	ko00903,ko00930,ko01220,map00903,map00930,map01220	-	R03751,R06390,R06391,R06392,R06393	RC00713,RC00983,RC01505	ko00000,ko00001,ko01000	-	-	-	Abhydrolase_3
BYD3_k127_441881_26	1144313.PMI10_02213	3.503e-50	184.0	2CMS6@1|root,32SFE@2|Bacteria,4NWI0@976|Bacteroidetes,1IAQW@117743|Flavobacteriia,2NWVT@237|Flavobacterium	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	DinB_2
BYD3_k127_441881_27	1121904.ARBP01000008_gene3332	3.62e-50	179.0	COG1695@1|root,COG1695@2|Bacteria	2|Bacteria	K	negative regulation of transcription, DNA-templated	-	-	-	-	-	-	-	-	-	-	-	-	PadR
BYD3_k127_441881_1	1123277.KB893195_gene5691	3.541e-297	936.0	COG0577@1|root,COG0577@2|Bacteria,4NDUK@976|Bacteroidetes,47NE2@768503|Cytophagia	976|Bacteroidetes	V	MacB-like periplasmic core domain	-	-	-	-	-	-	-	-	-	-	-	-	FtsX,MacB_PCD
BYD3_k127_441881_4	1237149.C900_03950	9.412e-262	831.0	COG0577@1|root,COG0577@2|Bacteria,4NDUK@976|Bacteroidetes,47JJN@768503|Cytophagia	976|Bacteroidetes	V	FtsX-like permease family	-	-	-	-	-	-	-	-	-	-	-	-	FtsX,MacB_PCD
BYD3_k127_441881_2	1123277.KB893201_gene6431	3.522e-272	864.0	COG0577@1|root,COG0577@2|Bacteria,4NDUK@976|Bacteroidetes	976|Bacteroidetes	V	permease	-	-	-	-	-	-	-	-	-	-	-	-	FtsX,MacB_PCD
BYD3_k127_441881_3	1123277.KB893195_gene5691	8.502e-272	861.0	COG0577@1|root,COG0577@2|Bacteria,4NDUK@976|Bacteroidetes,47NE2@768503|Cytophagia	976|Bacteroidetes	V	MacB-like periplasmic core domain	-	-	-	-	-	-	-	-	-	-	-	-	FtsX,MacB_PCD
BYD3_k127_441881_41	1121904.ARBP01000008_gene3331	3.716e-07	51.0	COG0577@1|root,COG0577@2|Bacteria,4NDUK@976|Bacteroidetes,47JJN@768503|Cytophagia	976|Bacteroidetes	V	FtsX-like permease family	-	-	-	ko:K02004	-	M00258	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	FtsX,MacB_PCD
BYD3_k127_441881_36	1185876.BN8_02090	4.238e-25	108.0	COG0491@1|root,COG0491@2|Bacteria,4NQCT@976|Bacteroidetes,47QDG@768503|Cytophagia	976|Bacteroidetes	S	Metallo-beta-lactamase superfamily	-	-	-	-	-	-	-	-	-	-	-	-	Lactamase_B
BYD3_k127_441881_35	153721.MYP_4621	2.157e-25	109.0	COG0491@1|root,COG0491@2|Bacteria,4NQCT@976|Bacteroidetes,47QDG@768503|Cytophagia	976|Bacteroidetes	S	Metallo-beta-lactamase superfamily	-	-	-	-	-	-	-	-	-	-	-	-	Lactamase_B
BYD3_k127_441881_22	1178825.ALIH01000001_gene2454	2.453e-66	235.0	28HRC@1|root,2Z7YT@2|Bacteria,4NKDD@976|Bacteroidetes,1HYNI@117743|Flavobacteriia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_441881_40	1121373.KB903620_gene2120	1.996e-08	65.0	COG0457@1|root,COG0457@2|Bacteria,4PP7B@976|Bacteroidetes,47WME@768503|Cytophagia	976|Bacteroidetes	S	Tetratricopeptide repeat	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_441881_5	551275.KB899544_gene1767	1.902e-209	674.0	COG4993@1|root,COG4993@2|Bacteria,1MUQX@1224|Proteobacteria,2TS2Q@28211|Alphaproteobacteria,43X6D@69657|Hyphomonadaceae	28211|Alphaproteobacteria	CG	alcohol dehydrogenase	-	-	1.1.9.1	ko:K17760	-	-	-	-	ko00000,ko01000	-	-	-	Cytochrome_CBB3,PQQ,PQQ_2
BYD3_k127_441881_25	1501230.ET33_17595	3.427e-53	192.0	COG1247@1|root,COG1247@2|Bacteria,1VJ3A@1239|Firmicutes,4HRVQ@91061|Bacilli	91061|Bacilli	M	Acetyltransferase (GNAT) family	-	-	-	-	-	-	-	-	-	-	-	-	Acetyltransf_1
BYD3_k127_441881_10	153721.MYP_3248	1.708e-136	439.0	COG0604@1|root,COG0604@2|Bacteria,4NHHT@976|Bacteroidetes,47N64@768503|Cytophagia	976|Bacteroidetes	C	COGs COG0604 NADPH quinone reductase and related Zn-dependent oxidoreductase	-	-	-	-	-	-	-	-	-	-	-	-	ADH_N,ADH_N_2,ADH_zinc_N_2
BYD3_k127_441881_16	1185876.BN8_06457	1.378e-111	369.0	COG2207@1|root,COG2207@2|Bacteria,4NRBA@976|Bacteroidetes,47S2G@768503|Cytophagia	976|Bacteroidetes	K	Arabinose-binding domain of AraC transcription regulator, N-term	-	-	-	-	-	-	-	-	-	-	-	-	Arabinose_bd,HTH_18
BYD3_k127_441881_15	1499689.CCNN01000007_gene865	5.964e-112	379.0	COG1680@1|root,COG1680@2|Bacteria,1TRPT@1239|Firmicutes,2495H@186801|Clostridia,36WDR@31979|Clostridiaceae	186801|Clostridia	V	Beta-lactamase	-	-	-	-	-	-	-	-	-	-	-	-	ABC_tran,Beta-lactamase,DUF302
BYD3_k127_441881_31	991.IW20_08320	5.891e-44	163.0	COG3631@1|root,COG3631@2|Bacteria,4NSBA@976|Bacteroidetes,1I5KV@117743|Flavobacteriia,2NZ3X@237|Flavobacterium	976|Bacteroidetes	S	Ketosteroid isomerase-related protein	-	-	-	-	-	-	-	-	-	-	-	-	SnoaL_2
BYD3_k127_441881_24	1163671.JAGI01000003_gene932	3.282e-53	192.0	COG0262@1|root,COG0262@2|Bacteria,1TRY1@1239|Firmicutes,25CP0@186801|Clostridia,36WYJ@31979|Clostridiaceae	186801|Clostridia	H	RibD C-terminal domain	-	-	-	-	-	-	-	-	-	-	-	-	RibD_C
BYD3_k127_441881_30	1034807.FBFL15_2432	7.299e-46	172.0	COG1670@1|root,COG1670@2|Bacteria,4NTJQ@976|Bacteroidetes,1I9IW@117743|Flavobacteriia,2NXBR@237|Flavobacterium	976|Bacteroidetes	J	Acetyltransferase (GNAT) domain	-	-	-	-	-	-	-	-	-	-	-	-	Acetyltransf_1,Acetyltransf_3
BYD3_k127_441881_28	1313301.AUGC01000004_gene2206	1.826e-48	194.0	COG4251@1|root,COG4251@2|Bacteria,4NI5R@976|Bacteroidetes	976|Bacteroidetes	T	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase	-	-	-	-	-	-	-	-	-	-	-	-	HATPase_c,HisKA,PAS_9
BYD3_k127_441881_6	1237149.C900_05293	3.044e-203	659.0	COG0577@1|root,COG0577@2|Bacteria,4NKYD@976|Bacteroidetes,47MU6@768503|Cytophagia	976|Bacteroidetes	V	MacB-like periplasmic core domain	-	-	-	-	-	-	-	-	-	-	-	-	FtsX,MacB_PCD
BYD3_k127_441881_29	1250232.JQNJ01000001_gene2301	1.679e-47	174.0	COG0454@1|root,COG0456@2|Bacteria,4NQ82@976|Bacteroidetes,1I2X6@117743|Flavobacteriia	976|Bacteroidetes	K	acetyltransferase	-	-	-	-	-	-	-	-	-	-	-	-	Acetyltransf_1
BYD3_k127_441881_32	1286632.P278_27590	2.408e-42	162.0	COG2318@1|root,COG2318@2|Bacteria,4PKC6@976|Bacteroidetes,1IJ77@117743|Flavobacteriia	976|Bacteroidetes	S	DinB superfamily	-	-	-	-	-	-	-	-	-	-	-	-	DinB_2
BYD3_k127_441881_18	1408473.JHXO01000005_gene1676	4.16e-85	288.0	COG1051@1|root,COG1051@2|Bacteria,4PMRX@976|Bacteroidetes	976|Bacteroidetes	F	NUDIX domain	-	-	-	-	-	-	-	-	-	-	-	-	NUDIX
BYD3_k127_441881_8	468059.AUHA01000005_gene2429	3.819e-160	548.0	COG0642@1|root,COG3292@1|root,COG0642@2|Bacteria,COG2205@2|Bacteria,COG3292@2|Bacteria,4NDXU@976|Bacteroidetes,1IRJZ@117747|Sphingobacteriia	976|Bacteroidetes	T	His Kinase A (phosphoacceptor) domain	-	-	-	-	-	-	-	-	-	-	-	-	7TMR-DISM_7TM,HATPase_c,HisKA,PAS_9,Reg_prop,Response_reg,Y_Y_Y
BYD3_k127_441881_7	1237149.C900_05493	2.3e-161	514.0	COG1186@1|root,COG1186@2|Bacteria,4NEN1@976|Bacteroidetes,47KHU@768503|Cytophagia	976|Bacteroidetes	J	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA	prfB	-	-	ko:K02836	-	-	-	-	ko00000,ko03012	-	-	-	PCRF,RF-1
BYD3_k127_441881_11	1124780.ANNU01000005_gene2460	1.516e-126	417.0	COG0477@1|root,COG2814@2|Bacteria,4NE7F@976|Bacteroidetes,47MD0@768503|Cytophagia	976|Bacteroidetes	EGP	PFAM Major Facilitator Superfamily	-	-	-	-	-	-	-	-	-	-	-	-	MFS_1,Sugar_tr
BYD3_k127_441881_39	866536.Belba_0560	1.351e-12	77.0	2DS2Z@1|root,33EAC@2|Bacteria,4P46N@976|Bacteroidetes,47T75@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_441881_17	1123248.KB893333_gene2815	1.875e-89	297.0	COG2128@1|root,COG2128@2|Bacteria,4NMGS@976|Bacteroidetes,1IXMN@117747|Sphingobacteriia	976|Bacteroidetes	S	Carboxymuconolactone decarboxylase family	-	-	-	-	-	-	-	-	-	-	-	-	CMD
BYD3_k127_441881_0	1123278.KB893418_gene4054	0.0	1150.0	COG1629@1|root,COG4771@2|Bacteria,4NDX3@976|Bacteroidetes,47Y1Q@768503|Cytophagia	976|Bacteroidetes	P	Carboxypeptidase regulatory-like domain	-	-	-	-	-	-	-	-	-	-	-	-	CarbopepD_reg_2,Plug,TonB_dep_Rec
BYD3_k127_441881_13	1123248.KB893333_gene2814	2.594e-124	410.0	COG0477@1|root,COG2814@2|Bacteria,4NEY4@976|Bacteroidetes,1IV9Q@117747|Sphingobacteriia	976|Bacteroidetes	EGP	Sugar (and other) transporter	-	-	-	-	-	-	-	-	-	-	-	-	MFS_1
BYD3_k127_441881_21	760192.Halhy_0025	3.521e-72	247.0	COG2128@1|root,COG2128@2|Bacteria,4NNYF@976|Bacteroidetes,1IT75@117747|Sphingobacteriia	976|Bacteroidetes	S	Carboxymuconolactone decarboxylase family	-	-	-	-	-	-	-	-	-	-	-	-	CMD
BYD3_k127_441881_20	760192.Halhy_0024	1.154e-74	254.0	COG2128@1|root,COG2128@2|Bacteria,4NNHK@976|Bacteroidetes,1IWPA@117747|Sphingobacteriia	976|Bacteroidetes	S	Carboxymuconolactone decarboxylase family	-	-	-	-	-	-	-	-	-	-	-	-	CMD
BYD3_k127_443443_24	1121904.ARBP01000004_gene927	2.099e-218	702.0	COG1629@1|root,COG1629@2|Bacteria,4PKVH@976|Bacteroidetes,47K3W@768503|Cytophagia	976|Bacteroidetes	P	PFAM TonB-dependent Receptor Plug	-	-	-	-	-	-	-	-	-	-	-	-	CarbopepD_reg_2,Plug
BYD3_k127_443443_96	1341181.FLJC2902T_06480	4.746e-49	186.0	COG0300@1|root,COG0300@2|Bacteria,4NKNE@976|Bacteroidetes,1IMIN@117743|Flavobacteriia,2NTWH@237|Flavobacterium	976|Bacteroidetes	S	Belongs to the short-chain dehydrogenases reductases (SDR) family	-	-	-	ko:K07124	-	-	-	-	ko00000	-	-	-	adh_short
BYD3_k127_443443_122	760192.Halhy_3044	1.372e-16	89.0	COG1266@1|root,COG1266@2|Bacteria,4P5RH@976|Bacteroidetes	976|Bacteroidetes	S	CAAX protease self-immunity	-	-	-	-	-	-	-	-	-	-	-	-	Abi
BYD3_k127_443443_73	313606.M23134_04250	2.899e-87	300.0	COG0451@1|root,COG0451@2|Bacteria,4NEMN@976|Bacteroidetes,47KEU@768503|Cytophagia	976|Bacteroidetes	GM	NmrA-like family	dfrA	-	1.1.1.219	ko:K00091	-	-	-	-	ko00000,ko01000	-	-	-	Epimerase
BYD3_k127_443443_89	929556.Solca_1230	3.715e-58	224.0	COG3000@1|root,COG3000@2|Bacteria,4NI60@976|Bacteroidetes,1IRF9@117747|Sphingobacteriia	976|Bacteroidetes	I	Fatty acid hydroxylase superfamily	-	-	-	-	-	-	-	-	-	-	-	-	FA_hydroxylase
BYD3_k127_443443_83	1123248.KB893320_gene3894	4.223e-63	222.0	COG2197@1|root,COG2197@2|Bacteria	2|Bacteria	K	response regulator	-	-	-	-	-	-	-	-	-	-	-	-	GerE,Response_reg
BYD3_k127_443443_102	1123278.KB893409_gene31	1.877e-44	173.0	COG4585@1|root,COG4585@2|Bacteria,4NNE1@976|Bacteroidetes,47PFT@768503|Cytophagia	976|Bacteroidetes	T	Histidine kinase-like ATPases	-	-	-	-	-	-	-	-	-	-	-	-	HATPase_c,HisKA_3
BYD3_k127_443443_126	1296416.JACB01000006_gene571	7.721e-10	68.0	2ECA3@1|root,3368F@2|Bacteria,4NW35@976|Bacteroidetes,1IM9X@117743|Flavobacteriia,2YITU@290174|Aquimarina	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_443443_90	1237149.C900_01961	5.136e-58	206.0	COG0454@1|root,COG0454@2|Bacteria,4PN0S@976|Bacteroidetes	976|Bacteroidetes	K	Acetyltransferase (GNAT) family	-	-	-	-	-	-	-	-	-	-	-	-	Acetyltransf_1
BYD3_k127_443443_118	1189612.A33Q_1257	2.068e-26	113.0	COG1393@1|root,COG1393@2|Bacteria,4NXD1@976|Bacteroidetes,47SWP@768503|Cytophagia	976|Bacteroidetes	P	ArsC family	-	-	1.20.4.1	ko:K00537	-	-	-	-	ko00000,ko01000	-	-	-	ArsC
BYD3_k127_443443_49	105559.Nwat_1913	7.569e-133	438.0	COG1007@1|root,COG1007@2|Bacteria,1MV56@1224|Proteobacteria,1RPJB@1236|Gammaproteobacteria,1WW6G@135613|Chromatiales	135613|Chromatiales	C	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient	-	-	1.6.5.3	ko:K00343	ko00190,ko01100,map00190,map01100	M00144	R11945	RC00061	ko00000,ko00001,ko00002,ko01000	3.D.1	-	-	Proton_antipo_M
BYD3_k127_443443_29	1434325.AZQN01000003_gene2181	5.899e-200	636.0	COG1008@1|root,COG1008@2|Bacteria,4NEJ1@976|Bacteroidetes,47MKB@768503|Cytophagia	976|Bacteroidetes	C	TIGRFAM proton-translocating NADH-quinone oxidoreductase, chain M	-	-	1.6.5.3	ko:K00342	ko00190,ko01100,map00190,map01100	M00144	R11945	RC00061	ko00000,ko00001,ko00002,ko01000	3.D.1	-	-	Proton_antipo_M
BYD3_k127_443443_16	1123368.AUIS01000006_gene665	2.704e-237	749.0	COG1009@1|root,COG1009@2|Bacteria,1MW2M@1224|Proteobacteria,1RNKN@1236|Gammaproteobacteria,2NCNU@225057|Acidithiobacillales	225057|Acidithiobacillales	CP	NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus	-	-	1.6.5.3	ko:K00341	ko00190,ko01100,map00190,map01100	M00144	R11945	RC00061	ko00000,ko00001,ko00002,ko01000	3.D.1	-	-	Proton_antipo_M,Proton_antipo_N
BYD3_k127_443443_112	706587.Desti_4753	3.962e-37	141.0	COG0713@1|root,COG0713@2|Bacteria,1RH0S@1224|Proteobacteria,42VAT@68525|delta/epsilon subdivisions,2WRE5@28221|Deltaproteobacteria	28221|Deltaproteobacteria	C	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient	nuoK-2	GO:0003674,GO:0003824,GO:0003954,GO:0005575,GO:0005623,GO:0005886,GO:0008137,GO:0008150,GO:0008152,GO:0016020,GO:0016491,GO:0016651,GO:0016655,GO:0030964,GO:0032991,GO:0044425,GO:0044459,GO:0044464,GO:0045271,GO:0045272,GO:0050136,GO:0055114,GO:0070469,GO:0070470,GO:0071944,GO:0098796,GO:0098797,GO:0098803,GO:1902494,GO:1990204	1.6.5.3	ko:K00340	ko00190,ko01100,map00190,map01100	M00144	R11945	RC00061	ko00000,ko00001,ko00002,ko01000	3.D.1	-	-	Oxidored_q2
BYD3_k127_443443_93	323261.Noc_1119	2.38e-50	184.0	COG0839@1|root,COG0839@2|Bacteria,1MWJV@1224|Proteobacteria,1S65T@1236|Gammaproteobacteria	1236|Gammaproteobacteria	C	Belongs to the complex I subunit 6 family	nuoJ	GO:0003674,GO:0003824,GO:0003954,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0008137,GO:0008150,GO:0008152,GO:0016020,GO:0016021,GO:0016491,GO:0016651,GO:0016655,GO:0030964,GO:0031224,GO:0031226,GO:0032991,GO:0044425,GO:0044459,GO:0044464,GO:0045271,GO:0045272,GO:0050136,GO:0055114,GO:0070469,GO:0070470,GO:0071944,GO:0098796,GO:0098797,GO:0098803,GO:1902494,GO:1990204	1.6.5.3	ko:K00339	ko00190,ko01100,map00190,map01100	M00144	R11945	RC00061	ko00000,ko00001,ko00002,ko01000	3.D.1	-	e_coli_core.b2280,iAF1260.b2280,iAPECO1_1312.APECO1_4285,iB21_1397.B21_02165,iBWG_1329.BWG_2054,iE2348C_1286.E2348C_2420,iEC042_1314.EC042_2521,iEC55989_1330.EC55989_2524,iECABU_c1320.ECABU_c26120,iECBD_1354.ECBD_1381,iECB_1328.ECB_02205,iECDH10B_1368.ECDH10B_2442,iECDH1ME8569_1439.ECDH1ME8569_2217,iECD_1391.ECD_02205,iECED1_1282.ECED1_2744,iECH74115_1262.ECH74115_3419,iECIAI1_1343.ECIAI1_2354,iECIAI39_1322.ECIAI39_2427,iECNA114_1301.ECNA114_2370,iECO103_1326.ECO103_2744,iECO111_1330.ECO111_3028,iECO26_1355.ECO26_3268,iECOK1_1307.ECOK1_2513,iECP_1309.ECP_2319,iECS88_1305.ECS88_2427,iECSE_1348.ECSE_2537,iECSF_1327.ECSF_2157,iECSP_1301.ECSP_3154,iECUMN_1333.ECUMN_2619,iECW_1372.ECW_m2468,iECs_1301.ECs3164,iEKO11_1354.EKO11_1487,iETEC_1333.ETEC_2415,iEcDH1_1363.EcDH1_1377,iEcE24377_1341.EcE24377A_2573,iEcHS_1320.EcHS_A2429,iEcSMS35_1347.EcSMS35_2434,iEcolC_1368.EcolC_1372,iJO1366.b2280,iJR904.b2280,iLF82_1304.LF82_1547,iNRG857_1313.NRG857_11545,iSBO_1134.SBO_2313,iSDY_1059.SDY_2476,iSFV_1184.SFV_2347,iSF_1195.SF2356,iSFxv_1172.SFxv_2600,iSSON_1240.SSON_2337,iS_1188.S2491,iSbBS512_1146.SbBS512_E2656,iUMN146_1321.UM146_05415,iUMNK88_1353.UMNK88_2830,iUTI89_1310.UTI89_C2560,iWFL_1372.ECW_m2468,iY75_1357.Y75_RS11955,iZ_1308.Z3539,ic_1306.c2821	Oxidored_q3
BYD3_k127_443443_70	929556.Solca_3107	3.198e-94	310.0	COG1143@1|root,COG1143@2|Bacteria,4NK9I@976|Bacteroidetes,1IV59@117747|Sphingobacteriia	976|Bacteroidetes	C	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient	-	-	1.6.5.3	ko:K00338	ko00190,ko01100,map00190,map01100	M00144	R11945	RC00061	ko00000,ko00001,ko00002,ko01000	3.D.1	-	-	Fer4,Fer4_4
BYD3_k127_443443_43	929556.Solca_3106	2.818e-153	489.0	COG1005@1|root,COG1005@2|Bacteria,4NGK7@976|Bacteroidetes,1IVA3@117747|Sphingobacteriia	976|Bacteroidetes	C	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone	nuoH	-	1.6.5.3	ko:K00337	ko00190,ko01100,map00190,map01100	M00144	R11945	RC00061	ko00000,ko00001,ko00002,ko01000	3.D.1	-	-	NADHdh
BYD3_k127_443443_2	1266925.JHVX01000004_gene1249	0.0	1084.0	COG1034@1|root,COG1034@2|Bacteria,1P8MN@1224|Proteobacteria,2VJYV@28216|Betaproteobacteria,373XN@32003|Nitrosomonadales	28216|Betaproteobacteria	C	Molybdopterin oxidoreductase Fe4S4 domain	-	-	1.6.5.3	ko:K00336	ko00190,ko01100,map00190,map01100	M00144	R11945	RC00061	ko00000,ko00001,ko00002,ko01000	3.D.1	-	-	Fer2_4,Molybdop_Fe4S4,Molybdopterin,NADH-G_4Fe-4S_3
BYD3_k127_443443_25	1123248.KB893322_gene648	2.723e-215	674.0	COG1894@1|root,COG1894@2|Bacteria,4NHD2@976|Bacteroidetes,1IVX2@117747|Sphingobacteriia	976|Bacteroidetes	C	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain	-	-	1.6.5.3	ko:K00335	ko00190,ko01100,map00190,map01100	M00144	R11945	RC00061	ko00000,ko00001,ko00002,ko01000	3.D.1	-	-	Complex1_51K,NADH_4Fe-4S,SLBB
BYD3_k127_443443_86	929556.Solca_3103	6.823e-61	213.0	COG1905@1|root,COG1905@2|Bacteria,4NNV1@976|Bacteroidetes,1IXJV@117747|Sphingobacteriia	976|Bacteroidetes	C	Thioredoxin-like [2Fe-2S] ferredoxin	-	-	1.6.5.3	ko:K00334	ko00190,ko01100,map00190,map01100	M00144	R11945	RC00061	ko00000,ko00001,ko00002,ko01000	3.D.1	-	-	2Fe-2S_thioredx
BYD3_k127_443443_6	929556.Solca_3102	8.445e-314	968.0	COG0649@1|root,COG0852@1|root,COG0649@2|Bacteria,COG0852@2|Bacteria,4NF02@976|Bacteroidetes,1IVFN@117747|Sphingobacteriia	976|Bacteroidetes	C	Belongs to the complex I 30 kDa subunit family	-	-	1.6.5.3	ko:K13378	ko00190,ko01100,map00190,map01100	M00144	R11945	RC00061	ko00000,ko00001,ko00002,ko01000	3.D.1	-	-	Complex1_30kDa,Complex1_49kDa
BYD3_k127_443443_57	929556.Solca_3099	6.241e-115	372.0	COG0377@1|root,COG0377@2|Bacteria,4NZUK@976|Bacteroidetes,1IV9I@117747|Sphingobacteriia	976|Bacteroidetes	C	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient	-	-	1.6.5.3	ko:K00331	ko00190,ko01100,map00190,map01100	M00144	R11945	RC00061	ko00000,ko00001,ko00002,ko01000	3.D.1	-	-	Oxidored_q6
BYD3_k127_443443_98	929556.Solca_3098	1.171e-47	175.0	COG0838@1|root,COG0838@2|Bacteria,4NRGH@976|Bacteroidetes,1IXZP@117747|Sphingobacteriia	976|Bacteroidetes	C	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient	-	-	1.6.5.3	ko:K00330	ko00190,ko01100,map00190,map01100	M00144	R11945	RC00061	ko00000,ko00001,ko00002,ko01000	3.D.1	-	-	Oxidored_q4
BYD3_k127_443443_21	1408813.AYMG01000008_gene3911	3.013e-227	723.0	COG0855@1|root,COG0855@2|Bacteria,4NE3P@976|Bacteroidetes,1IP1X@117747|Sphingobacteriia	976|Bacteroidetes	H	Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)	ppk	-	2.7.4.1	ko:K00937	ko00190,ko03018,map00190,map03018	-	-	-	ko00000,ko00001,ko01000,ko03019	-	-	-	PP_kinase,PP_kinase_C,PP_kinase_N
BYD3_k127_443443_15	1123276.KB893245_gene1444	2.023e-240	766.0	COG0577@1|root,COG0577@2|Bacteria,4NDUK@976|Bacteroidetes,47JYF@768503|Cytophagia	976|Bacteroidetes	V	MacB-like periplasmic core domain	-	-	-	-	-	-	-	-	-	-	-	-	FtsX,MacB_PCD
BYD3_k127_443443_106	935840.JAEQ01000002_gene3498	1.107e-41	164.0	COG0346@1|root,COG0346@2|Bacteria,1PKTJ@1224|Proteobacteria,2UZFD@28211|Alphaproteobacteria,43PU2@69277|Phyllobacteriaceae	28211|Alphaproteobacteria	E	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily	-	-	-	-	-	-	-	-	-	-	-	-	Glyoxalase
BYD3_k127_443443_115	883078.HMPREF9695_02297	1.58e-34	143.0	COG2764@1|root,COG2764@2|Bacteria,1RF5T@1224|Proteobacteria,2U922@28211|Alphaproteobacteria,3JY6M@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily	-	-	-	ko:K04750	-	-	-	-	ko00000	-	-	-	Glyoxalase
BYD3_k127_443443_51	1123277.KB893206_gene3464	1.41e-128	421.0	COG0685@1|root,COG0685@2|Bacteria,4NJPU@976|Bacteroidetes,47PWJ@768503|Cytophagia	976|Bacteroidetes	E	Methylenetetrahydrofolate reductase	-	-	-	-	-	-	-	-	-	-	-	-	MTHFR
BYD3_k127_443443_117	1005048.CFU_0231	2.641e-27	116.0	COG4319@1|root,COG4319@2|Bacteria,1NCJR@1224|Proteobacteria,2VURJ@28216|Betaproteobacteria,477EQ@75682|Oxalobacteraceae	28216|Betaproteobacteria	S	Domain of unknown function (DUF4440)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4440
BYD3_k127_443443_17	1158294.JOMI01000001_gene1849	4.667e-237	750.0	COG3533@1|root,COG3533@2|Bacteria,4NG7T@976|Bacteroidetes,2FPXE@200643|Bacteroidia	976|Bacteroidetes	S	protein conserved in bacteria	-	-	-	-	-	-	-	-	-	-	-	-	Glyco_hydro_127
BYD3_k127_443443_75	1166018.FAES_0032	1.131e-84	287.0	COG3485@1|root,COG3485@2|Bacteria,4NFYS@976|Bacteroidetes,47KW0@768503|Cytophagia	976|Bacteroidetes	Q	Dioxygenase	-	-	-	-	-	-	-	-	-	-	-	-	Dioxygenase_C
BYD3_k127_443443_108	761193.Runsl_2704	2.067e-41	160.0	COG1741@1|root,COG1741@2|Bacteria,4NGJ5@976|Bacteroidetes,47Q2V@768503|Cytophagia	976|Bacteroidetes	S	Belongs to the pirin family	-	-	-	ko:K06911	-	-	-	-	ko00000	-	-	-	Pirin
BYD3_k127_443443_69	926549.KI421517_gene3169	2.203e-95	314.0	COG0110@1|root,COG0110@2|Bacteria,4NNWE@976|Bacteroidetes,47KBH@768503|Cytophagia	976|Bacteroidetes	S	Maltose acetyltransferase	maa	-	2.3.1.79	ko:K00661	-	-	-	-	ko00000,ko01000	-	-	-	Hexapep,Hexapep_2,Mac
BYD3_k127_443443_4	504472.Slin_1880	0.0	1047.0	COG2133@1|root,COG3241@1|root,COG2133@2|Bacteria,COG3241@2|Bacteria,4NEMM@976|Bacteroidetes,47KGJ@768503|Cytophagia	976|Bacteroidetes	CG	PFAM Blue (type 1) copper domain	-	-	-	-	-	-	-	-	-	-	-	-	Copper-bind
BYD3_k127_443443_14	504472.Slin_1879	3.284e-241	762.0	COG2010@1|root,COG3291@1|root,COG2010@2|Bacteria,COG3291@2|Bacteria,4NEJ0@976|Bacteroidetes,47NVV@768503|Cytophagia	976|Bacteroidetes	C	Domain of Unknown Function (DUF1080)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1080,PA14
BYD3_k127_443443_10	700598.Niako_4610	3.551e-281	875.0	COG0737@1|root,COG0737@2|Bacteria,4NESM@976|Bacteroidetes,1IVAT@117747|Sphingobacteriia	976|Bacteroidetes	F	COGs COG0737 5'-nucleotidase 2' 3'-cyclic phosphodiesterase and related esterase	-	-	3.1.3.5,3.6.1.45	ko:K01081,ko:K11751	ko00230,ko00240,ko00760,ko01100,ko01110,map00230,map00240,map00760,map01100,map01110	-	R00183,R00511,R00963,R01126,R01227,R01569,R01664,R01968,R02088,R02102,R02323,R02719,R03346	RC00017	ko00000,ko00001,ko01000	-	-	-	5_nucleotid_C,Metallophos
BYD3_k127_443443_99	1131812.JQMS01000001_gene1669	3.903e-47	174.0	COG0346@1|root,COG0346@2|Bacteria,4NSC9@976|Bacteroidetes,1I32P@117743|Flavobacteriia	976|Bacteroidetes	E	Glyoxalase bleomycin resistance protein dioxygenase	-	-	-	-	-	-	-	-	-	-	-	-	Glyoxalase
BYD3_k127_443443_84	926556.Echvi_1503	6.321e-63	220.0	COG4276@1|root,COG4276@2|Bacteria,4NQJG@976|Bacteroidetes,47QN0@768503|Cytophagia	976|Bacteroidetes	S	SRPBCC domain-containing protein	-	-	-	-	-	-	-	-	-	-	-	-	Polyketide_cyc
BYD3_k127_443443_19	471854.Dfer_0140	7.636e-235	751.0	COG0577@1|root,COG0577@2|Bacteria,4NDUK@976|Bacteroidetes,47NTJ@768503|Cytophagia	976|Bacteroidetes	V	MacB-like periplasmic core domain	-	-	-	ko:K02004	-	M00258	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	FtsX,MacB_PCD
BYD3_k127_443443_8	700598.Niako_2199	2.224e-302	933.0	COG2987@1|root,COG2987@2|Bacteria,4NF2P@976|Bacteroidetes,1IR41@117747|Sphingobacteriia	976|Bacteroidetes	E	Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate	hutU	-	4.2.1.49	ko:K01712	ko00340,ko01100,map00340,map01100	M00045	R02914	RC00804	ko00000,ko00001,ko00002,ko01000	-	-	-	Urocanase,Urocanase_C,Urocanase_N
BYD3_k127_443443_39	700598.Niako_2196	1.334e-176	562.0	COG1228@1|root,COG1228@2|Bacteria,4NE6C@976|Bacteroidetes,1IP1S@117747|Sphingobacteriia	976|Bacteroidetes	Q	COG1228 Imidazolonepropionase and related	hutI	-	3.5.2.7	ko:K01468	ko00340,ko01100,map00340,map01100	M00045	R02288	RC00683	ko00000,ko00001,ko00002,ko01000	-	-	-	Amidohydro_1,Amidohydro_3
BYD3_k127_443443_72	700598.Niako_2194	1.531e-93	318.0	COG0010@1|root,COG0010@2|Bacteria,4NEFA@976|Bacteroidetes,1IRUU@117747|Sphingobacteriia	976|Bacteroidetes	E	Belongs to the arginase family	hutG	-	3.5.3.7,3.5.3.8	ko:K01479,ko:K12255	ko00330,ko00340,ko01100,map00330,map00340,map01100	M00045	R01990,R02285	RC00024,RC00221,RC00329,RC00681	ko00000,ko00001,ko00002,ko01000	-	-	-	Arginase
BYD3_k127_443443_85	195253.Syn6312_3518	1.589e-62	222.0	COG2227@1|root,COG2227@2|Bacteria,1G9UR@1117|Cyanobacteria	1117|Cyanobacteria	H	Methionine biosynthesis protein MetW	-	-	-	ko:K20444	-	-	-	-	ko00000,ko01000,ko01005,ko02000	4.D.1.3	GT2,GT4	-	Glyco_trans_1_2,Methyltransf_23
BYD3_k127_443443_97	1279009.ADICEAN_00477	7.065e-49	189.0	COG3063@1|root,COG3063@2|Bacteria	2|Bacteria	NU	photosynthesis	-	-	-	ko:K20543	-	-	-	-	ko00000,ko02000	1.B.55.3	-	-	BCSC_C,DUF560,TPR_16,TPR_19,TPR_8
BYD3_k127_443443_114	1123248.KB893325_gene1138	6.638e-36	140.0	2E3B3@1|root,32YAM@2|Bacteria,4NW81@976|Bacteroidetes,1ITTZ@117747|Sphingobacteriia	976|Bacteroidetes	S	Protein of Unknown function (DUF2784)	-	-	-	-	-	-	-	-	-	-	-	-	DUF2784
BYD3_k127_443443_60	661478.OP10G_0780	7.482e-108	368.0	COG0366@1|root,COG0366@2|Bacteria	2|Bacteria	G	hydrolase activity, hydrolyzing O-glycosyl compounds	-	-	3.2.1.1	ko:K01176	ko00500,ko01100,ko04973,map00500,map01100,map04973	-	R02108,R02112,R11262	-	ko00000,ko00001,ko01000	-	GH13	-	Alpha-amylase,Malt_amylase_C
BYD3_k127_443443_79	1123277.KB893228_gene2012	2.894e-77	272.0	COG1696@1|root,COG1696@2|Bacteria,4NFK5@976|Bacteroidetes	976|Bacteroidetes	M	Membrane protein involved in D-alanine export	-	-	-	-	-	-	-	-	-	-	-	-	MBOAT
BYD3_k127_443443_47	1121373.KB903626_gene3321	4.05e-139	463.0	COG0318@1|root,COG0318@2|Bacteria,4NFPF@976|Bacteroidetes,47NTH@768503|Cytophagia	976|Bacteroidetes	IQ	AMP-binding enzyme C-terminal domain	-	-	6.2.1.3	ko:K01897,ko:K18660	ko00061,ko00071,ko00280,ko01100,ko01212,ko02024,ko03320,ko04146,ko04216,ko04714,ko04920,map00061,map00071,map00280,map01100,map01212,map02024,map03320,map04146,map04216,map04714,map04920	M00086	R01280,R03383	RC00004,RC00014,RC00137	ko00000,ko00001,ko00002,ko01000,ko01004,ko04147	4.C.1.1	-	-	AMP-binding,AMP-binding_C
BYD3_k127_443443_103	388413.ALPR1_11430	2.475e-43	160.0	COG1695@1|root,COG1695@2|Bacteria,4NTYF@976|Bacteroidetes,47R1G@768503|Cytophagia	976|Bacteroidetes	K	Transcriptional regulator PadR-like family	-	-	-	-	-	-	-	-	-	-	-	-	PadR
BYD3_k127_443443_12	929703.KE386491_gene1720	3.991e-273	865.0	COG0577@1|root,COG0577@2|Bacteria,4NDUK@976|Bacteroidetes	976|Bacteroidetes	V	permease	-	-	-	-	-	-	-	-	-	-	-	-	FtsX,MacB_PCD
BYD3_k127_443443_116	589873.EP13_05755	9.44e-29	119.0	2FH9E@1|root,3493R@2|Bacteria	2|Bacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_443443_124	742767.HMPREF9456_00068	4.267e-16	82.0	COG3795@1|root,COG3795@2|Bacteria,4NUTR@976|Bacteroidetes	976|Bacteroidetes	S	YCII-related domain	-	-	-	-	-	-	-	-	-	-	-	-	YCII
BYD3_k127_443443_61	616991.JPOO01000003_gene972	2.172e-107	355.0	COG2207@1|root,COG2207@2|Bacteria,4NEVG@976|Bacteroidetes,1HX26@117743|Flavobacteriia,23GX4@178469|Arenibacter	976|Bacteroidetes	K	helix_turn_helix, arabinose operon control protein	-	-	-	-	-	-	-	-	-	-	-	-	AraC_binding,HTH_18
BYD3_k127_443443_0	616991.JPOO01000003_gene971	0.0	1520.0	COG1413@1|root,COG2133@1|root,COG3241@1|root,COG3250@1|root,COG3828@1|root,COG1413@2|Bacteria,COG2133@2|Bacteria,COG3241@2|Bacteria,COG3250@2|Bacteria,COG3828@2|Bacteria,4NQ6P@976|Bacteroidetes,1I34Z@117743|Flavobacteriia	976|Bacteroidetes	C	PFAM Copper binding proteins, plastocyanin azurin family	-	-	-	-	-	-	-	-	-	-	-	-	BetaGal_dom4_5,Copper-bind,ThuA
BYD3_k127_443443_50	616991.JPOO01000003_gene970	5.96e-129	417.0	COG1082@1|root,COG1082@2|Bacteria,4NHGW@976|Bacteroidetes,1I08E@117743|Flavobacteriia,23GCU@178469|Arenibacter	976|Bacteroidetes	G	Xylose isomerase-like TIM barrel	-	-	5.1.3.30,5.1.3.31	ko:K18910	-	-	R10817,R10818	RC03111,RC03283	ko00000,ko01000	-	-	-	AP_endonuc_2
BYD3_k127_443443_26	616991.JPOO01000003_gene969	1.012e-211	662.0	COG0673@1|root,COG0673@2|Bacteria,4NEJM@976|Bacteroidetes,1HZQQ@117743|Flavobacteriia	976|Bacteroidetes	S	Oxidoreductase family, NAD-binding Rossmann fold	-	-	-	-	-	-	-	-	-	-	-	-	GFO_IDH_MocA
BYD3_k127_443443_62	1121904.ARBP01000011_gene1522	2.86e-107	364.0	2DBP2@1|root,2ZA71@2|Bacteria,4NFFI@976|Bacteroidetes,47NDZ@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_443443_42	643867.Ftrac_0196	3.806e-158	512.0	COG3104@1|root,COG3104@2|Bacteria,4NE8R@976|Bacteroidetes,47JX4@768503|Cytophagia	976|Bacteroidetes	E	TIGRFAM amino acid peptide transporter (Peptide H symporter), bacterial	-	-	-	ko:K03305	-	-	-	-	ko00000	2.A.17	-	-	PTR2
BYD3_k127_443443_52	1288963.ADIS_1970	1.127e-126	412.0	COG0329@1|root,COG0329@2|Bacteria,4NF2Z@976|Bacteroidetes,47MUZ@768503|Cytophagia	976|Bacteroidetes	EM	Belongs to the DapA family	-	-	3.5.4.22,4.3.3.7	ko:K01714,ko:K21062	ko00261,ko00300,ko00330,ko01100,ko01110,ko01120,ko01130,ko01230,map00261,map00300,map00330,map01100,map01110,map01120,map01130,map01230	M00016,M00525,M00526,M00527	R02280,R10147	RC00679,RC03062,RC03063	ko00000,ko00001,ko00002,ko01000	-	-	-	DHDPS
BYD3_k127_443443_37	1185876.BN8_05503	1.972e-181	571.0	COG3938@1|root,COG3938@2|Bacteria,4NHJZ@976|Bacteroidetes,47KV9@768503|Cytophagia	976|Bacteroidetes	E	Belongs to the proline racemase family	-	-	5.1.1.8	ko:K12658	ko00330,map00330	-	R03296	RC00479	ko00000,ko00001,ko01000	-	-	-	Pro_racemase
BYD3_k127_443443_44	1123278.KB893433_gene687	8.93e-150	484.0	COG0665@1|root,COG0665@2|Bacteria,4NEUE@976|Bacteroidetes,47K8K@768503|Cytophagia	976|Bacteroidetes	E	PFAM FAD dependent oxidoreductase	dadA	-	1.4.5.1	ko:K00285	ko00360,map00360	-	R01374,R09493	RC00006,RC00025	ko00000,ko00001,ko01000	-	-	-	DAO
BYD3_k127_443443_18	929562.Emtol_2348	3.734e-236	741.0	COG0308@1|root,COG0308@2|Bacteria,4NGUB@976|Bacteroidetes,47K4K@768503|Cytophagia	976|Bacteroidetes	E	Peptidase M1, membrane alanine aminopeptidase	-	-	-	-	-	-	-	-	-	-	-	-	Peptidase_M1
BYD3_k127_443443_125	411477.PARMER_04312	1.646e-14	75.0	COG1826@1|root,COG1826@2|Bacteria,4NUNH@976|Bacteroidetes,2FUYY@200643|Bacteroidia,230Y9@171551|Porphyromonadaceae	976|Bacteroidetes	U	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system	tatA	-	-	ko:K03116	ko03060,ko03070,map03060,map03070	M00336	-	-	ko00000,ko00001,ko00002,ko02044	2.A.64	-	-	MttA_Hcf106
BYD3_k127_443443_58	1131812.JQMS01000001_gene3234	5.632e-112	368.0	COG2267@1|root,COG2267@2|Bacteria,4NFDA@976|Bacteroidetes,1HYMF@117743|Flavobacteriia,2NTJE@237|Flavobacterium	976|Bacteroidetes	I	Arylesterase	-	-	3.4.11.5	ko:K01259	ko00330,map00330	-	R00135	-	ko00000,ko00001,ko01000,ko01002	-	-	-	Abhydrolase_1
BYD3_k127_443443_28	269798.CHU_1246	1.521e-206	647.0	COG1063@1|root,COG1063@2|Bacteria,4NE11@976|Bacteroidetes,47JMX@768503|Cytophagia	976|Bacteroidetes	E	Alcohol dehydrogenase GroES domain protein	-	-	1.1.1.1	ko:K00001	ko00010,ko00071,ko00350,ko00625,ko00626,ko00830,ko00980,ko00982,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00625,map00626,map00830,map00980,map00982,map01100,map01110,map01120,map01130,map01220	-	R00623,R00754,R02124,R04805,R04880,R05233,R05234,R06917,R06927,R07105,R08281,R08306,R08310	RC00050,RC00087,RC00088,RC00099,RC00116,RC00649,RC01734,RC02273	ko00000,ko00001,ko01000	-	-	-	ADH_N,ADH_N_assoc,ADH_zinc_N
BYD3_k127_443443_105	700598.Niako_3472	1.209e-42	159.0	COG0640@1|root,COG0640@2|Bacteria,4NSDX@976|Bacteroidetes,1IXWT@117747|Sphingobacteriia	976|Bacteroidetes	K	PFAM Bacterial regulatory protein, arsR family	-	-	-	-	-	-	-	-	-	-	-	-	HTH_20
BYD3_k127_443443_111	1121382.JQKG01000021_gene1949	1.576e-37	147.0	COG3832@1|root,COG3832@2|Bacteria	2|Bacteria	J	glyoxalase III activity	gstF	-	2.5.1.18	ko:K00799	ko00480,ko00980,ko00982,ko00983,ko01524,ko05200,ko05204,ko05225,ko05418,map00480,map00980,map00982,map00983,map01524,map05200,map05204,map05225,map05418	-	R03522,R07002,R07003,R07004,R07023,R07024,R07025,R07026,R07069,R07070,R07083,R07084,R07091,R07092,R07093,R07094,R07100,R07113,R07116,R08280,R09409,R11905	RC00004,RC00069,RC00840,RC00948,RC01704,RC01705,RC01706,RC01758,RC01759,RC01765,RC01767,RC01769,RC02243,RC02527,RC02939,RC02940,RC02942,RC02943,RC02944	ko00000,ko00001,ko01000,ko02000	1.A.12.2.2,1.A.12.3.2	-	-	AHSA1,GST_C,GST_N_3
BYD3_k127_443443_91	468059.AUHA01000002_gene379	5.564e-54	197.0	COG0262@1|root,COG0262@2|Bacteria,4NPJF@976|Bacteroidetes,1J056@117747|Sphingobacteriia	976|Bacteroidetes	H	RibD C-terminal domain	-	-	-	-	-	-	-	-	-	-	-	-	RibD_C
BYD3_k127_443443_104	485918.Cpin_5873	2.674e-43	164.0	COG0500@1|root,COG0500@2|Bacteria,4PN8K@976|Bacteroidetes	976|Bacteroidetes	H	Methyltransferase domain	-	-	-	-	-	-	-	-	-	-	-	-	Methyltransf_11
BYD3_k127_443443_67	1227739.Hsw_PA0176	2.73e-96	343.0	COG0793@1|root,COG0793@2|Bacteria,4NEK8@976|Bacteroidetes,47MAF@768503|Cytophagia	976|Bacteroidetes	M	Peptidase family S41	-	-	-	-	-	-	-	-	-	-	-	-	Peptidase_S41
BYD3_k127_443443_71	700598.Niako_4615	1.406e-93	314.0	2CAD1@1|root,2Z81J@2|Bacteria,4NJ4C@976|Bacteroidetes,1IXXS@117747|Sphingobacteriia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_443443_63	616991.JPOO01000003_gene648	2.407e-105	347.0	COG5285@1|root,COG5285@2|Bacteria,4NFFH@976|Bacteroidetes	976|Bacteroidetes	Q	COG5285 Protein involved in biosynthesis of mitomycin antibiotics polyketide fumonisin	-	-	-	-	-	-	-	-	-	-	-	-	PhyH
BYD3_k127_443443_127	641524.ADICYQ_4744	2.856e-09	58.0	COG1357@1|root,COG1357@2|Bacteria,4NQ3B@976|Bacteroidetes,47QB7@768503|Cytophagia	976|Bacteroidetes	S	PFAM Pentapeptide repeats (8 copies)	-	-	-	-	-	-	-	-	-	-	-	-	Pentapeptide,Pentapeptide_4
BYD3_k127_443443_76	1443665.JACA01000024_gene3377	1.229e-83	285.0	COG2021@1|root,COG2021@2|Bacteria,4NWJC@976|Bacteroidetes,1IIHA@117743|Flavobacteriia,2YM3X@290174|Aquimarina	976|Bacteroidetes	E	Alpha/beta hydrolase family	-	-	-	-	-	-	-	-	-	-	-	-	Abhydrolase_1
BYD3_k127_443443_9	1185876.BN8_04944	8.933e-288	891.0	COG2303@1|root,COG2303@2|Bacteria,4NHJT@976|Bacteroidetes,47JIT@768503|Cytophagia	976|Bacteroidetes	E	GMC oxidoreductase	-	-	-	-	-	-	-	-	-	-	-	-	GMC_oxred_C,GMC_oxred_N
BYD3_k127_443443_120	760192.Halhy_3108	1.097e-21	99.0	COG5646@1|root,COG5646@2|Bacteria,4NW3X@976|Bacteroidetes,1IZMU@117747|Sphingobacteriia	976|Bacteroidetes	S	Domain of unknown function (DU1801)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1801
BYD3_k127_443443_130	1279009.ADICEAN_03532	0.0004082	44.0	COG2311@1|root,COG2311@2|Bacteria,4NG01@976|Bacteroidetes,47P3T@768503|Cytophagia	976|Bacteroidetes	S	Protein of unknown function (DUF418)	-	-	-	ko:K07148	-	-	-	-	ko00000	-	-	-	DUF418
BYD3_k127_443443_65	247490.KSU1_C1712	2.732e-100	344.0	2DBP2@1|root,2ZA71@2|Bacteria	2|Bacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_443443_5	616991.JPOO01000003_gene39	0.0	1022.0	COG1529@1|root,COG1529@2|Bacteria,4NFFU@976|Bacteroidetes,1HXJS@117743|Flavobacteriia	976|Bacteroidetes	C	COG1529 Aerobic-type carbon monoxide dehydrogenase large subunit CoxL CutL homologs	-	-	1.3.99.16	ko:K07303	-	-	-	-	ko00000,ko01000	-	-	-	Ald_Xan_dh_C,Ald_Xan_dh_C2
BYD3_k127_443443_82	313606.M23134_07067	2.466e-67	231.0	COG2080@1|root,COG2080@2|Bacteria,4NM72@976|Bacteroidetes,47XN3@768503|Cytophagia	976|Bacteroidetes	C	[2Fe-2S] binding domain	iorA5	-	1.3.99.16	ko:K07302	-	-	-	-	ko00000,ko01000	-	-	-	Fer2,Fer2_2
BYD3_k127_443443_113	926569.ANT_06330	4.011e-36	147.0	COG0500@1|root,COG2226@2|Bacteria	2|Bacteria	Q	methyltransferase	-	-	-	-	-	-	-	-	-	-	-	-	Methyltransf_11,Methyltransf_25
BYD3_k127_443443_123	1122919.KB905640_gene397	1.879e-16	85.0	COG5528@1|root,COG5528@2|Bacteria,1VW9Q@1239|Firmicutes,4HWSC@91061|Bacilli,26YQB@186822|Paenibacillaceae	91061|Bacilli	S	Predicted integral membrane protein (DUF2269)	-	-	-	-	-	-	-	-	-	-	-	-	DUF2269
BYD3_k127_443443_32	1123248.KB893325_gene1149	3.742e-190	604.0	COG0412@1|root,COG0412@2|Bacteria,4NIXW@976|Bacteroidetes,1IXE7@117747|Sphingobacteriia	976|Bacteroidetes	Q	COG COG1073 Hydrolases of the alpha beta superfamily	-	-	-	-	-	-	-	-	-	-	-	-	Abhydrolase_7,Pec_lyase,Peptidase_S9
BYD3_k127_443443_22	1123248.KB893381_gene968	3.12e-226	709.0	COG0673@1|root,COG0673@2|Bacteria,4NF3G@976|Bacteroidetes,1IRDK@117747|Sphingobacteriia	976|Bacteroidetes	S	PFAM Oxidoreductase family, NAD-binding Rossmann fold	-	-	-	-	-	-	-	-	-	-	-	-	GFO_IDH_MocA
BYD3_k127_443443_100	1286632.P278_00790	2.957e-46	169.0	COG3070@1|root,COG3070@2|Bacteria,4NSGZ@976|Bacteroidetes,1I4CE@117743|Flavobacteriia	976|Bacteroidetes	K	TfoX N-terminal domain	-	-	-	-	-	-	-	-	-	-	-	-	TfoX_N
BYD3_k127_443443_110	929713.NIASO_01850	1.195e-38	148.0	COG3631@1|root,COG3631@2|Bacteria,4NPEK@976|Bacteroidetes	976|Bacteroidetes	S	Ketosteroid isomerase-related protein	-	-	-	-	-	-	-	-	-	-	-	-	SnoaL,SnoaL_2
BYD3_k127_443443_46	1033734.CAET01000012_gene1768	2.891e-142	460.0	COG2021@1|root,COG2021@2|Bacteria,1TQSV@1239|Firmicutes,4HBNC@91061|Bacilli,1ZE4K@1386|Bacillus	91061|Bacilli	E	alpha/beta hydrolase fold	metX	-	2.3.1.31	ko:K00641	ko00270,ko01100,ko01130,map00270,map01100,map01130	-	R01776	RC00004,RC00041	ko00000,ko00001,ko01000	-	-	-	Abhydrolase_1
BYD3_k127_443443_81	616991.JPOO01000001_gene3360	5.224e-69	244.0	COG2207@1|root,COG2207@2|Bacteria,4PI6R@976|Bacteroidetes,1IG3A@117743|Flavobacteriia,23IGX@178469|Arenibacter	976|Bacteroidetes	K	helix_turn_helix, arabinose operon control protein	-	-	-	-	-	-	-	-	-	-	-	-	HTH_18
BYD3_k127_443443_68	1123276.KB893275_gene2320	3.111e-96	331.0	COG0671@1|root,COG0671@2|Bacteria,4NF9W@976|Bacteroidetes,47M2K@768503|Cytophagia	976|Bacteroidetes	I	PFAM Phosphatidic acid phosphatase type 2 haloperoxidase	-	-	-	-	-	-	-	-	-	-	-	-	PAP2
BYD3_k127_443443_40	945713.IALB_3182	3.26e-176	603.0	COG0745@1|root,COG3291@1|root,COG3292@1|root,COG5002@1|root,COG0745@2|Bacteria,COG3291@2|Bacteria,COG3292@2|Bacteria,COG5002@2|Bacteria	2|Bacteria	T	protein histidine kinase activity	-	-	-	-	-	-	-	-	-	-	-	-	HAMP,HATPase_c,HTH_18,HisKA,PAS_4,PKD,Reg_prop,Response_reg,Y_Y_Y
BYD3_k127_443443_64	700598.Niako_6696	1.439e-100	339.0	2CEJ5@1|root,2Z7RK@2|Bacteria,4NGWQ@976|Bacteroidetes,1IS7V@117747|Sphingobacteriia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	Phenol_MetA_deg
BYD3_k127_443443_87	1250232.JQNJ01000001_gene2672	3.61e-60	215.0	COG1416@1|root,COG1416@2|Bacteria,4NH85@976|Bacteroidetes	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_443443_77	760192.Halhy_2655	5.082e-83	282.0	COG0454@1|root,COG0456@2|Bacteria,4NPYR@976|Bacteroidetes	976|Bacteroidetes	K	Acetyltransferase (GNAT) domain	-	-	-	-	-	-	-	-	-	-	-	-	Acetyltransf_10
BYD3_k127_443443_7	1279009.ADICEAN_00128	5.412e-307	966.0	COG0642@1|root,COG0745@1|root,COG1879@1|root,COG0745@2|Bacteria,COG1879@2|Bacteria,COG2205@2|Bacteria,4NDXU@976|Bacteroidetes,47M6S@768503|Cytophagia	976|Bacteroidetes	T	Periplasmic binding protein domain	-	-	-	-	-	-	-	-	-	-	-	-	HATPase_c,HTH_18,HisKA,Peripla_BP_4,Response_reg
BYD3_k127_443443_30	1121904.ARBP01000050_gene4425	5.921e-193	612.0	COG0477@1|root,COG2814@2|Bacteria,4NE09@976|Bacteroidetes,47MBV@768503|Cytophagia	976|Bacteroidetes	EGP	Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family	xylE	-	-	-	-	-	-	-	-	-	-	-	Sugar_tr
BYD3_k127_443443_1	1123248.KB893315_gene3199	0.0	1286.0	COG1629@1|root,COG4771@2|Bacteria,4P1Z5@976|Bacteroidetes,1J0YK@117747|Sphingobacteriia	976|Bacteroidetes	P	TonB dependent receptor	-	-	-	-	-	-	-	-	-	-	-	-	CarbopepD_reg_2,Plug,TonB_dep_Rec
BYD3_k127_443443_11	1123248.KB893315_gene3198	7.433e-275	854.0	COG0446@1|root,COG0446@2|Bacteria,4NE3A@976|Bacteroidetes,1IQUY@117747|Sphingobacteriia	976|Bacteroidetes	S	SusD family	-	-	-	ko:K21572	-	-	-	-	ko00000,ko02000	8.A.46.1,8.A.46.3	-	-	SusD-like_3,SusD_RagB
BYD3_k127_443443_13	504472.Slin_1912	1.004e-244	764.0	COG0823@1|root,COG0823@2|Bacteria,4NG4S@976|Bacteroidetes,47KMG@768503|Cytophagia	976|Bacteroidetes	U	WD40-like Beta Propeller Repeat	-	-	-	-	-	-	-	-	-	-	-	-	PD40
BYD3_k127_443443_31	1123248.KB893315_gene3197	6.399e-193	619.0	COG1621@1|root,COG1621@2|Bacteria,4NEYI@976|Bacteroidetes,1IVXV@117747|Sphingobacteriia	976|Bacteroidetes	G	Glycosyl hydrolases family 32	-	-	3.2.1.80	ko:K03332	ko00051,map00051	-	R00879	-	ko00000,ko00001,ko01000	-	-	-	DUF4980,Glyco_hydro_32C,Glyco_hydro_32N
BYD3_k127_443443_36	497964.CfE428DRAFT_0570	1.399e-183	592.0	COG1621@1|root,COG1621@2|Bacteria,46WGP@74201|Verrucomicrobia	74201|Verrucomicrobia	G	Belongs to the glycosyl hydrolase 32 family	-	-	3.2.1.80	ko:K03332	ko00051,map00051	-	R00879	-	ko00000,ko00001,ko01000	-	-	-	Glyco_hydro_32C,Glyco_hydro_32N
BYD3_k127_443443_33	497964.CfE428DRAFT_0570	3.552e-189	607.0	COG1621@1|root,COG1621@2|Bacteria,46WGP@74201|Verrucomicrobia	74201|Verrucomicrobia	G	Belongs to the glycosyl hydrolase 32 family	-	-	3.2.1.80	ko:K03332	ko00051,map00051	-	R00879	-	ko00000,ko00001,ko01000	-	-	-	Glyco_hydro_32C,Glyco_hydro_32N
BYD3_k127_443443_27	497964.CfE428DRAFT_0570	4.19e-210	666.0	COG1621@1|root,COG1621@2|Bacteria,46WGP@74201|Verrucomicrobia	74201|Verrucomicrobia	G	Belongs to the glycosyl hydrolase 32 family	-	-	3.2.1.80	ko:K03332	ko00051,map00051	-	R00879	-	ko00000,ko00001,ko01000	-	-	-	Glyco_hydro_32C,Glyco_hydro_32N
BYD3_k127_443443_88	797209.ZOD2009_14571	4.433e-60	228.0	COG1621@1|root,arCOG08134@2157|Archaea,2XUXA@28890|Euryarchaeota,23UA6@183963|Halobacteria	183963|Halobacteria	G	COG1621 Beta-fructosidases (levanase invertase)	-	-	-	-	-	-	-	-	-	-	-	-	Glyco_hydro_32C,Glyco_hydro_32N
BYD3_k127_443443_45	761193.Runsl_1190	2.11e-147	479.0	COG0477@1|root,COG2814@2|Bacteria,4NE09@976|Bacteroidetes,47MBV@768503|Cytophagia	976|Bacteroidetes	EGP	Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family	-	-	-	-	-	-	-	-	-	-	-	-	Sugar_tr
BYD3_k127_443443_131	509635.N824_08815	0.0006651	43.0	COG1621@1|root,COG1621@2|Bacteria,4NIK3@976|Bacteroidetes,1ITEA@117747|Sphingobacteriia	976|Bacteroidetes	G	Glycosyl hydrolases family 32 N-terminal domain	-	-	-	-	-	-	-	-	-	-	-	-	Glyco_hydro_32N
BYD3_k127_443443_20	761193.Runsl_4865	3.647e-234	738.0	COG2272@1|root,COG2272@2|Bacteria,4NG5B@976|Bacteroidetes,47JGD@768503|Cytophagia	976|Bacteroidetes	I	Belongs to the type-B carboxylesterase lipase family	-	-	-	ko:K03929	-	-	-	-	ko00000,ko01000	-	CE10	-	COesterase
BYD3_k127_443443_38	1121904.ARBP01000050_gene4429	5.284e-177	568.0	COG1621@1|root,COG1621@2|Bacteria,4NEYI@976|Bacteroidetes,47KIP@768503|Cytophagia	976|Bacteroidetes	G	Belongs to the glycosyl hydrolase 32 family	-	-	3.2.1.80	ko:K03332	ko00051,map00051	-	R00879	-	ko00000,ko00001,ko01000	-	-	-	Glyco_hydro_32C,Glyco_hydro_32N
BYD3_k127_443443_78	1279009.ADICEAN_00119	1.621e-80	278.0	COG0524@1|root,COG0524@2|Bacteria,4NGFK@976|Bacteroidetes,47VAC@768503|Cytophagia	976|Bacteroidetes	G	pfkB family carbohydrate kinase	ydjH_1	-	2.7.1.4	ko:K00847	ko00051,ko00500,ko00520,ko01100,map00051,map00500,map00520,map01100	-	R00760,R00867,R03920	RC00002,RC00017	ko00000,ko00001,ko01000	-	-	-	PfkB
BYD3_k127_443443_121	760192.Halhy_2705	2.238e-18	99.0	COG0457@1|root,COG0457@2|Bacteria	760192.Halhy_2705|-	S	peptidyl-tyrosine sulfation	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_443443_101	452637.Oter_1824	6.919e-45	182.0	COG0823@1|root,COG0823@2|Bacteria	2|Bacteria	U	Involved in the tonB-independent uptake of proteins	-	-	-	-	-	-	-	-	-	-	-	-	OmpA,PD40
BYD3_k127_443443_54	760192.Halhy_4312	1.476e-118	387.0	COG2220@1|root,COG2220@2|Bacteria,4PBVG@976|Bacteroidetes,1IZA4@117747|Sphingobacteriia	976|Bacteroidetes	S	Beta-lactamase superfamily domain	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_443443_35	760192.Halhy_4313	5.426e-187	589.0	COG0620@1|root,COG0620@2|Bacteria,4NF5S@976|Bacteroidetes,1IQYW@117747|Sphingobacteriia	976|Bacteroidetes	E	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation	metE	-	2.1.1.14	ko:K00549	ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230	M00017	R04405,R09365	RC00035,RC00113,RC01241	ko00000,ko00001,ko00002,ko01000	-	-	-	Meth_synt_1,Meth_synt_2
BYD3_k127_443443_53	1185876.BN8_00276	1.117e-122	398.0	COG4821@1|root,COG4821@2|Bacteria,4NHQW@976|Bacteroidetes,47MJI@768503|Cytophagia	976|Bacteroidetes	S	SIS domain	-	-	-	-	-	-	-	-	-	-	-	-	SIS_2
BYD3_k127_443443_119	2423.NA23_0203080	1.936e-25	117.0	COG1940@1|root,COG1940@2|Bacteria,2GCCT@200918|Thermotogae	200918|Thermotogae	G	PFAM ROK family	-	-	2.7.1.2	ko:K00845	ko00010,ko00052,ko00500,ko00520,ko00521,ko00524,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00052,map00500,map00520,map00521,map00524,map01100,map01110,map01120,map01130,map01200	M00001,M00549	R00299,R01600,R01786	RC00002,RC00017	ko00000,ko00001,ko00002,ko01000	-	-	-	ROK
BYD3_k127_443443_56	1121904.ARBP01000026_gene692	4.271e-115	376.0	COG1028@1|root,COG1028@2|Bacteria,4NJKA@976|Bacteroidetes,47KN3@768503|Cytophagia	976|Bacteroidetes	IQ	Short-chain dehydrogenase reductase SDR	-	-	-	-	-	-	-	-	-	-	-	-	adh_short_C2
BYD3_k127_443443_55	760192.Halhy_5822	8.439e-116	380.0	COG1082@1|root,COG1082@2|Bacteria,4NJ3Z@976|Bacteroidetes	976|Bacteroidetes	G	Xylose isomerase	-	-	-	-	-	-	-	-	-	-	-	-	AP_endonuc_2
BYD3_k127_443443_48	929556.Solca_1500	6.149e-133	428.0	COG2207@1|root,COG4275@1|root,COG2207@2|Bacteria,COG4275@2|Bacteria,4NIZN@976|Bacteroidetes,1IQES@117747|Sphingobacteriia	976|Bacteroidetes	K	Chromate resistance exported protein	-	-	-	-	-	-	-	-	-	-	-	-	Chrome_Resist,HTH_18
BYD3_k127_443443_80	929556.Solca_1499	1.112e-71	244.0	COG4275@1|root,COG4275@2|Bacteria,4PKPP@976|Bacteroidetes,1IX8W@117747|Sphingobacteriia	976|Bacteroidetes	S	PFAM Chromate resistance exported protein	-	-	-	-	-	-	-	-	-	-	-	-	Chrome_Resist
BYD3_k127_443443_41	269798.CHU_2155	4.442e-175	555.0	COG2059@1|root,COG2059@2|Bacteria,4NNZ1@976|Bacteroidetes,47M3J@768503|Cytophagia	976|Bacteroidetes	P	TIGRFAM chromate transporter, chromate ion transporter (CHR) family	-	-	-	ko:K07240	-	-	-	-	ko00000,ko02000	2.A.51.1	-	-	Chromate_transp
BYD3_k127_443443_23	1492738.FEM21_10870	2.113e-223	700.0	COG1233@1|root,COG1233@2|Bacteria,4NF31@976|Bacteroidetes,1HYWT@117743|Flavobacteriia,2NY9G@237|Flavobacterium	976|Bacteroidetes	Q	FAD dependent oxidoreductase	pys	-	-	-	-	-	-	-	-	-	-	-	Amino_oxidase,NAD_binding_8
BYD3_k127_443443_66	485917.Phep_1339	3.476e-100	334.0	COG1028@1|root,COG1028@2|Bacteria,4NHDB@976|Bacteroidetes,1INQP@117747|Sphingobacteriia	976|Bacteroidetes	IQ	Short-chain dehydrogenase reductase SDR	-	-	-	-	-	-	-	-	-	-	-	-	adh_short_C2
BYD3_k127_443443_74	1123057.P872_23585	1.504e-86	292.0	COG0725@1|root,COG0725@2|Bacteria,4NMPV@976|Bacteroidetes,47PBN@768503|Cytophagia	976|Bacteroidetes	P	TIGRFAM molybdenum ABC transporter, periplasmic molybdate-binding protein	modA	-	-	ko:K02020	ko02010,map02010	M00189	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.8	-	-	SBP_bac_11
BYD3_k127_443443_109	471854.Dfer_5339	1.648e-40	155.0	COG2041@1|root,COG2041@2|Bacteria,4NSHC@976|Bacteroidetes,47QZ1@768503|Cytophagia	976|Bacteroidetes	S	Oxidoreductase molybdopterin binding domain	-	-	-	-	-	-	-	-	-	-	-	-	Oxidored_molyb
BYD3_k127_443443_3	531844.FIC_01273	0.0	1060.0	COG0474@1|root,COG0474@2|Bacteria,4NERM@976|Bacteroidetes,1HY67@117743|Flavobacteriia	976|Bacteroidetes	P	TIGRFAM ATPase, P-type, K Mg Cd Cu Zn Na Ca Na H-transporter	-	-	3.6.3.8	ko:K01537	-	-	-	-	ko00000,ko01000	3.A.3.2	-	-	Cation_ATPase_C,Cation_ATPase_N,E1-E2_ATPase,Hydrolase,Hydrolase_3
BYD3_k127_443443_34	388413.ALPR1_01095	1.197e-187	611.0	COG2207@1|root,COG2207@2|Bacteria	2|Bacteria	K	Transcriptional regulator	-	-	-	-	-	-	-	-	-	-	-	-	AraC_binding,HTH_18
BYD3_k127_443443_95	388413.ALPR1_01090	1.545e-49	180.0	2E4PM@1|root,32P93@2|Bacteria,4NRUB@976|Bacteroidetes,47VK6@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_443443_107	1121875.KB907549_gene1914	1.146e-41	158.0	COG0657@1|root,COG0657@2|Bacteria,4NUK2@976|Bacteroidetes	976|Bacteroidetes	I	acetylesterase activity	-	-	-	-	-	-	-	-	-	-	-	-	DUF4440
BYD3_k127_443443_128	1037409.BJ6T_48100	2.776e-07	61.0	2A35S@1|root,2Z970@2|Bacteria,1QYFG@1224|Proteobacteria,2TXQN@28211|Alphaproteobacteria,3K6UK@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	L-2-amino-thiazoline-4-carboxylic acid hydrolase	-	-	-	-	-	-	-	-	-	-	-	-	ATC_hydrolase
BYD3_k127_443443_59	485918.Cpin_3456	3.365e-108	353.0	COG1018@1|root,COG1018@2|Bacteria,4NM4J@976|Bacteroidetes,1IV3S@117747|Sphingobacteriia	976|Bacteroidetes	C	Oxidoreductase FAD-binding domain	-	-	-	-	-	-	-	-	-	-	-	-	FAD_binding_6,FAD_binding_8,NAD_binding_1
BYD3_k127_443443_94	880070.Cycma_3864	1.01e-49	182.0	COG0457@1|root,COG2114@1|root,COG2207@1|root,COG5616@1|root,COG0457@2|Bacteria,COG2114@2|Bacteria,COG2207@2|Bacteria,COG5616@2|Bacteria,4NFW7@976|Bacteroidetes,47N72@768503|Cytophagia	976|Bacteroidetes	K	helix_turn_helix, arabinose operon control protein	-	-	-	-	-	-	-	-	-	-	-	-	ANAPC3,Guanylate_cyc,HTH_18,TPR_19,TPR_8
BYD3_k127_443443_92	1380391.JIAS01000012_gene4124	5.655e-54	203.0	COG2114@1|root,COG2114@2|Bacteria,1ND4Q@1224|Proteobacteria,2U51W@28211|Alphaproteobacteria,2JXWG@204441|Rhodospirillales	204441|Rhodospirillales	T	Protein of unknown function (DUF2652)	-	-	-	-	-	-	-	-	-	-	-	-	DUF2652
BYD3_k127_4483170_8	1237149.C900_01494	2.164e-70	244.0	COG0577@1|root,COG0577@2|Bacteria,4NDW7@976|Bacteroidetes,47N35@768503|Cytophagia	976|Bacteroidetes	V	FtsX-like permease family	-	-	-	-	-	-	-	-	-	-	-	-	FtsX,MacB_PCD
BYD3_k127_4483170_1	1121012.AUKX01000004_gene3551	3.735e-161	518.0	COG1680@1|root,COG1680@2|Bacteria,4NGZR@976|Bacteroidetes,1HXEI@117743|Flavobacteriia,23H58@178469|Arenibacter	976|Bacteroidetes	V	Beta-lactamase	-	-	-	-	-	-	-	-	-	-	-	-	Beta-lactamase
BYD3_k127_4483170_5	1237149.C900_05017	7.073e-92	309.0	COG2207@1|root,COG2207@2|Bacteria,4NHA5@976|Bacteroidetes,47Y9A@768503|Cytophagia	976|Bacteroidetes	K	Helix-turn-helix domain	-	-	-	-	-	-	-	-	-	-	-	-	HTH_18
BYD3_k127_4483170_12	1237149.C900_05018	5.333e-58	204.0	COG1917@1|root,COG1917@2|Bacteria	2|Bacteria	L	Cupin 2, conserved barrel domain protein	-	-	-	-	-	-	-	-	-	-	-	-	AraC_binding,Cupin_2,Cupin_7,DUF4440,HTH_18
BYD3_k127_4483170_3	468059.AUHA01000002_gene990	9.388e-108	357.0	COG0861@1|root,COG0861@2|Bacteria,4NH7P@976|Bacteroidetes,1IQW6@117747|Sphingobacteriia	976|Bacteroidetes	P	Integral membrane protein TerC	-	-	-	ko:K05794	-	-	-	-	ko00000	-	-	-	TerC
BYD3_k127_4483170_0	1121957.ATVL01000006_gene3422	1.297e-293	914.0	COG3973@1|root,COG3973@2|Bacteria,4NITV@976|Bacteroidetes,47SRT@768503|Cytophagia	976|Bacteroidetes	L	UvrD-like helicase C-terminal domain	helD	-	3.6.4.12	ko:K03657	ko03420,ko03430,map03420,map03430	-	-	-	ko00000,ko00001,ko01000,ko03400	-	-	-	AAA_19,UvrD-helicase,UvrD_C,UvrD_C_2
BYD3_k127_4483170_7	313606.M23134_00219	3.814e-74	263.0	COG2972@1|root,COG2972@2|Bacteria,4NH1Q@976|Bacteroidetes,47PMI@768503|Cytophagia	976|Bacteroidetes	T	Histidine kinase	-	-	-	-	-	-	-	-	-	-	-	-	His_kinase
BYD3_k127_4483170_6	313606.M23134_00218	3.557e-89	301.0	COG3279@1|root,COG3279@2|Bacteria,4NI3K@976|Bacteroidetes,47PDV@768503|Cytophagia	976|Bacteroidetes	T	LytTr DNA-binding domain	-	-	-	-	-	-	-	-	-	-	-	-	LytTR,Response_reg
BYD3_k127_4483170_2	1185876.BN8_02035	1.246e-145	488.0	COG1529@1|root,COG1529@2|Bacteria,4P0U8@976|Bacteroidetes,47T8N@768503|Cytophagia	976|Bacteroidetes	C	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain	-	-	-	-	-	-	-	-	-	-	-	-	Ald_Xan_dh_C2
BYD3_k127_4483170_9	509635.N824_00485	1.631e-63	222.0	COG2080@1|root,COG2080@2|Bacteria,4NMVV@976|Bacteroidetes,1IRWY@117747|Sphingobacteriia	976|Bacteroidetes	C	[2Fe-2S] binding domain	-	-	1.3.99.16	ko:K07302	-	-	-	-	ko00000,ko01000	-	-	-	Fer2,Fer2_2
BYD3_k127_4483170_11	1336803.PHEL49_1628	6.819e-60	211.0	COG0590@1|root,COG0590@2|Bacteria,4NNMU@976|Bacteroidetes,1I1ZI@117743|Flavobacteriia,3VW7P@52959|Polaribacter	976|Bacteroidetes	FJ	MafB19-like deaminase	guaD	-	3.5.4.3	ko:K01487	ko00230,ko01100,map00230,map01100	-	R01676	RC00204	ko00000,ko00001,ko01000	-	-	-	dCMP_cyt_deam_1
BYD3_k127_4483170_13	1286170.RORB6_05920	1.992e-05	49.0	COG0262@1|root,COG0262@2|Bacteria,1R5UU@1224|Proteobacteria,1SEMI@1236|Gammaproteobacteria	1236|Gammaproteobacteria	H	RibD C-terminal domain	-	-	-	-	-	-	-	-	-	-	-	-	RibD_C
BYD3_k127_4483170_4	761193.Runsl_1742	1.446e-97	329.0	COG1735@1|root,COG1735@2|Bacteria,4NJYF@976|Bacteroidetes,47NZQ@768503|Cytophagia	976|Bacteroidetes	S	Phosphotriesterase family	php	-	-	ko:K07048	-	-	-	-	ko00000	-	-	-	PTE
BYD3_k127_4567349_0	1121904.ARBP01000017_gene5093	2.793e-158	519.0	COG1409@1|root,COG1409@2|Bacteria,4NFAP@976|Bacteroidetes,47V4E@768503|Cytophagia	976|Bacteroidetes	S	Calcineurin-like phosphoesterase	-	-	-	-	-	-	-	-	-	-	-	-	Fn3_assoc,Metallophos,PA14
BYD3_k127_4567349_2	391587.KAOT1_18622	2.619e-44	164.0	2E79R@1|root,331TA@2|Bacteria,4NVS3@976|Bacteroidetes	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_4567349_1	395961.Cyan7425_1930	3.934e-154	515.0	COG1413@1|root,COG1413@2|Bacteria,1G1H5@1117|Cyanobacteria,3KKAR@43988|Cyanothece	1117|Cyanobacteria	C	Domain of unknown function (DUF4132)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4132
BYD3_k127_457599_8	1121897.AUGO01000006_gene750	2.886e-134	432.0	COG4977@1|root,COG4977@2|Bacteria,4PMWI@976|Bacteroidetes,1IJZW@117743|Flavobacteriia,2P0UG@237|Flavobacterium	976|Bacteroidetes	K	helix_turn_helix, arabinose operon control protein	-	-	-	-	-	-	-	-	-	-	-	-	HTH_18
BYD3_k127_457599_12	1131812.JQMS01000001_gene1009	1.215e-109	362.0	COG1028@1|root,COG1028@2|Bacteria,4NFU6@976|Bacteroidetes,1HYGK@117743|Flavobacteriia,2NT6H@237|Flavobacterium	976|Bacteroidetes	IQ	short-chain dehydrogenase	-	-	-	-	-	-	-	-	-	-	-	-	adh_short_C2
BYD3_k127_457599_18	929562.Emtol_2185	4.588e-09	57.0	COG0008@1|root,COG0008@2|Bacteria,4NFCC@976|Bacteroidetes,47MT0@768503|Cytophagia	976|Bacteroidetes	J	PFAM Glutamyl glutaminyl-tRNA synthetase, class Ic, catalytic domain	glnS	-	6.1.1.18	ko:K01886	ko00970,ko01100,map00970,map01100	M00359,M00360	R03652	RC00055,RC00523	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	-	-	-	tRNA-synt_1c,tRNA-synt_1c_C
BYD3_k127_457599_13	1121904.ARBP01000009_gene4352	2.321e-53	190.0	COG3682@1|root,COG3682@2|Bacteria,4NT4V@976|Bacteroidetes,47R2Y@768503|Cytophagia	976|Bacteroidetes	K	Penicillinase repressor	-	-	-	-	-	-	-	-	-	-	-	-	Penicillinase_R
BYD3_k127_457599_6	1121904.ARBP01000009_gene4351	9.632e-174	559.0	COG0810@1|root,COG1629@1|root,COG0810@2|Bacteria,COG4771@2|Bacteria,4NW2E@976|Bacteroidetes,47YB7@768503|Cytophagia	976|Bacteroidetes	M	Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins	-	-	-	ko:K03832	-	-	-	-	ko00000,ko02000	2.C.1.1	-	-	Peptidase_M56,TonB_C
BYD3_k127_457599_17	903818.KI912268_gene838	2.697e-17	84.0	COG2110@1|root,COG2110@2|Bacteria	2|Bacteria	P	phosphatase homologous to the C-terminal domain of histone macroH2A1	-	-	-	-	-	-	-	-	-	-	-	-	Macro
BYD3_k127_457599_10	1380355.JNIJ01000037_gene5323	6.174e-117	384.0	COG1878@1|root,COG1878@2|Bacteria,1MVWU@1224|Proteobacteria,2TUQ1@28211|Alphaproteobacteria,3JRVC@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Putative cyclase	-	-	-	-	-	-	-	-	-	-	-	-	Cyclase
BYD3_k127_457599_19	1123033.ARNF01000052_gene1018	5.898e-07	53.0	COG0477@1|root,COG2814@2|Bacteria,1NGB4@1224|Proteobacteria,1RZ75@1236|Gammaproteobacteria,3NSX2@468|Moraxellaceae	1236|Gammaproteobacteria	EGP	MFS/sugar transport protein	phlE	-	-	-	-	-	-	-	-	-	-	-	MFS_1,Sugar_tr
BYD3_k127_457599_20	760192.Halhy_5000	1.225e-06	51.0	COG0183@1|root,COG0183@2|Bacteria,4NE3Q@976|Bacteroidetes,1IVK0@117747|Sphingobacteriia	976|Bacteroidetes	I	Belongs to the thiolase family	-	-	-	-	-	-	-	-	-	-	-	-	Thiolase_C,Thiolase_N
BYD3_k127_457599_5	1185876.BN8_03564	4.451e-190	599.0	COG1312@1|root,COG1312@2|Bacteria,4NIMS@976|Bacteroidetes,47JVK@768503|Cytophagia	976|Bacteroidetes	G	D-mannonate dehydratase (UxuA)	-	-	4.2.1.8	ko:K01686	ko00040,ko01100,map00040,map01100	M00061	R05606	RC00543	ko00000,ko00001,ko00002,ko01000	-	-	-	UxuA
BYD3_k127_457599_16	266748.HY04_00670	1.13e-19	91.0	COG2827@1|root,COG2827@2|Bacteria,4NUYX@976|Bacteroidetes,1I4DQ@117743|Flavobacteriia,3ZSN0@59732|Chryseobacterium	976|Bacteroidetes	L	GIY-YIG catalytic domain	-	-	-	ko:K07461	-	-	-	-	ko00000	-	-	-	GIY-YIG
BYD3_k127_457599_14	1168034.FH5T_02255	4.398e-27	111.0	COG1506@1|root,COG1506@2|Bacteria,4PN2U@976|Bacteroidetes	976|Bacteroidetes	E	peptidase	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_457599_21	1189612.A33Q_3946	0.0004082	44.0	COG0627@1|root,COG4188@1|root,COG0627@2|Bacteria,COG4188@2|Bacteria,4NIU8@976|Bacteroidetes,47NUH@768503|Cytophagia	976|Bacteroidetes	E	Putative esterase	-	-	-	-	-	-	-	-	-	-	-	-	Esterase
BYD3_k127_457599_1	1185876.BN8_00286	9.489e-262	814.0	COG3507@1|root,COG3507@2|Bacteria,4NHSR@976|Bacteroidetes,47N9N@768503|Cytophagia	976|Bacteroidetes	G	Ricin-type beta-trefoil lectin domain-like	-	-	3.2.1.99	ko:K06113	-	-	-	-	ko00000,ko01000	-	GH43	-	Glyco_hydro_43,RicinB_lectin_2
BYD3_k127_457599_11	504472.Slin_6082	7.779e-117	380.0	COG3507@1|root,COG3507@2|Bacteria,4NKNH@976|Bacteroidetes,47K70@768503|Cytophagia	976|Bacteroidetes	G	Belongs to the glycosyl hydrolase 43 family	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_457599_4	762903.Pedsa_2823	7.564e-191	607.0	COG1070@1|root,COG1070@2|Bacteria,4NFBG@976|Bacteroidetes,1IPCF@117747|Sphingobacteriia	976|Bacteroidetes	G	Belongs to the FGGY kinase family	-	-	2.7.1.12	ko:K00851	ko00030,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map01100,map01110,map01120,map01130,map01200	-	R01737	RC00002,RC00017	ko00000,ko00001,ko01000	-	-	-	FGGY_C,FGGY_N
BYD3_k127_457599_7	762903.Pedsa_2822	7.562e-158	503.0	COG1052@1|root,COG1052@2|Bacteria,4PKE3@976|Bacteroidetes	976|Bacteroidetes	CH	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family	-	-	1.1.1.399,1.1.1.95	ko:K00058	ko00260,ko00680,ko01100,ko01120,ko01130,ko01200,ko01230,map00260,map00680,map01100,map01120,map01130,map01200,map01230	M00020	R01513	RC00031	ko00000,ko00001,ko00002,ko01000,ko04147	-	-	-	2-Hacid_dh,2-Hacid_dh_C
BYD3_k127_457599_3	1237149.C900_01307	3.465e-236	756.0	COG0577@1|root,COG0577@2|Bacteria,4NDUK@976|Bacteroidetes,47UC8@768503|Cytophagia	976|Bacteroidetes	V	MacB-like periplasmic core domain	-	-	-	-	-	-	-	-	-	-	-	-	FtsX,MacB_PCD
BYD3_k127_457599_9	1185876.BN8_02027	4.207e-124	408.0	COG3292@1|root,COG3292@2|Bacteria,4NI2T@976|Bacteroidetes,47KG1@768503|Cytophagia	976|Bacteroidetes	T	PFAM Two component regulator propeller	-	-	-	-	-	-	-	-	-	-	-	-	Reg_prop,YceI
BYD3_k127_457599_2	391603.FBALC1_04537	1.589e-242	773.0	COG0577@1|root,COG0577@2|Bacteria,4NDUK@976|Bacteroidetes,1I08U@117743|Flavobacteriia	976|Bacteroidetes	V	COG0577 ABC-type antimicrobial peptide transport system permease component	-	-	-	-	-	-	-	-	-	-	-	-	FtsX,MacB_PCD
BYD3_k127_457599_15	414684.RC1_2763	7.548e-26	117.0	COG4757@1|root,COG4757@2|Bacteria,1Q1V6@1224|Proteobacteria,2U1QB@28211|Alphaproteobacteria,2JWYS@204441|Rhodospirillales	204441|Rhodospirillales	S	Serine aminopeptidase, S33	-	-	-	-	-	-	-	-	-	-	-	-	Hydrolase_4
BYD3_k127_457599_0	1121904.ARBP01000008_gene3264	4.397e-321	989.0	COG2382@1|root,COG3386@1|root,COG2382@2|Bacteria,COG3386@2|Bacteria,4NK15@976|Bacteroidetes,47MMH@768503|Cytophagia	976|Bacteroidetes	P	Putative esterase	-	-	-	ko:K07214	-	-	-	-	ko00000	-	-	-	Esterase,SGL
BYD3_k127_4612321_37	247490.KSU1_D0100	4.905e-13	70.0	COG0614@1|root,COG0614@2|Bacteria,2J06G@203682|Planctomycetes	2|Bacteria	P	PD-(D/E)XK nuclease superfamily	-	-	-	-	-	-	-	-	-	-	-	-	PDDEXK_3
BYD3_k127_4612321_38	531844.FIC_00673	4.777e-11	63.0	COG0614@1|root,COG0614@2|Bacteria,4NQQ6@976|Bacteroidetes,1I4E1@117743|Flavobacteriia	976|Bacteroidetes	P	GxxExxY protein	-	-	-	-	-	-	-	-	-	-	-	-	PDDEXK_3
BYD3_k127_4612321_14	1123278.KB893433_gene631	1.95e-159	509.0	28K3C@1|root,2Z9SH@2|Bacteria,4NKA2@976|Bacteroidetes,47NBG@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_4612321_20	1123278.KB893433_gene630	5.26e-85	294.0	28PTH@1|root,2ZCER@2|Bacteria,4NN6T@976|Bacteroidetes,47PQ4@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_4612321_7	1121904.ARBP01000019_gene2778	2.719e-203	644.0	COG3419@1|root,COG3419@2|Bacteria,4NGV9@976|Bacteroidetes,47MMR@768503|Cytophagia	976|Bacteroidetes	NU	Tfp pilus assembly protein tip-associated adhesin	-	-	-	-	-	-	-	-	-	-	-	-	PQQ,PQQ_2
BYD3_k127_4612321_6	1121904.ARBP01000019_gene2779	7.34e-206	653.0	COG4198@1|root,COG4198@2|Bacteria,4NEAX@976|Bacteroidetes,47M4K@768503|Cytophagia	976|Bacteroidetes	S	Starch-binding associating with outer membrane	-	-	-	-	-	-	-	-	-	-	-	-	SusD-like,SusD-like_2
BYD3_k127_4612321_0	1121904.ARBP01000019_gene2780	0.0	1514.0	COG1629@1|root,COG4771@2|Bacteria,4NDU8@976|Bacteroidetes,47M35@768503|Cytophagia	976|Bacteroidetes	P	PFAM TonB-dependent Receptor Plug	-	-	-	-	-	-	-	-	-	-	-	-	CarbopepD_reg_2,Plug,TonB_dep_Rec
BYD3_k127_4612321_5	1185876.BN8_03277	3.267e-219	697.0	COG3158@1|root,COG3158@2|Bacteria,4NET9@976|Bacteroidetes,47K58@768503|Cytophagia	976|Bacteroidetes	P	Transport of potassium into the cell	kup	-	-	ko:K03549	-	-	-	-	ko00000,ko02000	2.A.72	-	-	K_trans
BYD3_k127_4612321_13	313606.M23134_05264	1.106e-166	534.0	COG1252@1|root,COG1252@2|Bacteria,4NE0H@976|Bacteroidetes,47K1Q@768503|Cytophagia	976|Bacteroidetes	C	PFAM FAD-dependent pyridine nucleotide-disulphide oxidoreductase	-	-	1.6.99.3	ko:K03885	ko00190,map00190	-	-	-	ko00000,ko00001,ko01000	-	-	-	Pyr_redox_2
BYD3_k127_4612321_16	760192.Halhy_3095	7.14e-140	456.0	COG1253@1|root,COG1253@2|Bacteria,4NDZ7@976|Bacteroidetes,1IQ0A@117747|Sphingobacteriia	976|Bacteroidetes	S	PFAM CBS domain	-	-	-	-	-	-	-	-	-	-	-	-	CBS,CorC_HlyC,DUF21
BYD3_k127_4612321_19	1237149.C900_04890	1.665e-120	395.0	COG0598@1|root,COG0598@2|Bacteria,4NG3C@976|Bacteroidetes,47JWS@768503|Cytophagia	976|Bacteroidetes	P	Mediates influx of magnesium ions	corA	-	-	ko:K03284	-	-	-	-	ko00000,ko02000	1.A.35.1,1.A.35.3	-	-	CorA
BYD3_k127_4612321_15	1237149.C900_04887	1.287e-151	485.0	COG0142@1|root,COG0142@2|Bacteria,4NET2@976|Bacteroidetes,47KFN@768503|Cytophagia	976|Bacteroidetes	H	Belongs to the FPP GGPP synthase family	ispB	-	2.5.1.90	ko:K02523	ko00900,ko01110,map00900,map01110	-	R09248	RC00279	ko00000,ko00001,ko01000,ko01006	-	-	-	polyprenyl_synt
BYD3_k127_4612321_12	1237149.C900_04882	3.782e-177	567.0	COG0526@1|root,COG0526@2|Bacteria,4NHEC@976|Bacteroidetes,47JHV@768503|Cytophagia	976|Bacteroidetes	CO	alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen	-	-	-	-	-	-	-	-	-	-	-	-	AhpC-TSA,DUF4369,DUF5106,Thioredoxin_8
BYD3_k127_4612321_18	153721.MYP_2216	3.792e-121	396.0	COG1131@1|root,COG1131@2|Bacteria,4NEH0@976|Bacteroidetes,47KF6@768503|Cytophagia	976|Bacteroidetes	V	TIGRFAM Gliding motility-associated ABC transporter ATP-binding subunit GldA	gldA	-	-	ko:K01990	-	M00254	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	ABC_tran
BYD3_k127_4612321_25	1454007.JAUG01000016_gene1722	1.214e-73	255.0	COG1277@1|root,COG1277@2|Bacteria,4NG5G@976|Bacteroidetes,1IRI4@117747|Sphingobacteriia	976|Bacteroidetes	S	TIGRFAM Gliding motility-associated ABC transporter permease protein GldF	gldF	-	-	ko:K01992	-	M00254	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	ABC2_membrane_2,ABC2_membrane_3
BYD3_k127_4612321_9	1237149.C900_04875	4.844e-196	627.0	COG3225@1|root,COG3225@2|Bacteria,4NF62@976|Bacteroidetes,47JZF@768503|Cytophagia	976|Bacteroidetes	N	ABC transporter substrate-binding component GldG	gldG	-	-	ko:K01992	-	M00254	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	ABC2_membrane_2,ABC_transp_aux
BYD3_k127_4612321_33	1237149.C900_04874	8.713e-45	175.0	2E7J5@1|root,3321E@2|Bacteria	2|Bacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	DUF4340
BYD3_k127_4612321_10	1237149.C900_04873	2.526e-192	606.0	COG0592@1|root,COG0592@2|Bacteria,4NESB@976|Bacteroidetes,47M1J@768503|Cytophagia	976|Bacteroidetes	L	Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria	dnaN	-	2.7.7.7	ko:K02338	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	M00260	R00375,R00376,R00377,R00378	RC02795	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	-	-	-	DNA_pol3_beta,DNA_pol3_beta_2,DNA_pol3_beta_3
BYD3_k127_4612321_24	761193.Runsl_4178	2.821e-75	255.0	COG0622@1|root,COG0622@2|Bacteria,4NM4G@976|Bacteroidetes,47QNZ@768503|Cytophagia	976|Bacteroidetes	S	TIGRFAM phosphoesterase, MJ0936 family	-	-	-	ko:K07095	-	-	-	-	ko00000	-	-	-	Metallophos_2
BYD3_k127_4612321_26	1237149.C900_02500	3.773e-72	250.0	COG2085@1|root,COG2085@2|Bacteria,4NQ1G@976|Bacteroidetes,47Q30@768503|Cytophagia	976|Bacteroidetes	S	NADP oxidoreductase coenzyme F420-dependent	-	-	1.5.1.40	ko:K06988	-	-	-	-	ko00000,ko01000	-	-	-	F420_oxidored
BYD3_k127_4612321_8	926549.KI421517_gene286	3.881e-198	637.0	COG1305@1|root,COG1305@2|Bacteria,4NEKT@976|Bacteroidetes,47NCY@768503|Cytophagia	976|Bacteroidetes	E	Domain of Unknown Function with PDB structure (DUF3857)	-	-	-	-	-	-	-	-	-	-	-	-	DUF3857,DUF3858,Transglut_core
BYD3_k127_4612321_36	1237149.C900_01259	1.77e-19	96.0	28P8J@1|root,2ZC2G@2|Bacteria,4NTQZ@976|Bacteroidetes,47SAC@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_4612321_28	1237149.C900_00393	9.25e-65	227.0	COG1595@1|root,COG1595@2|Bacteria,4NMYQ@976|Bacteroidetes,47PII@768503|Cytophagia	976|Bacteroidetes	K	TIGRFAM RNA polymerase sigma factor, sigma-70 family	-	-	-	ko:K03088	-	-	-	-	ko00000,ko03021	-	-	-	Sigma70_r2,Sigma70_r4_2
BYD3_k127_4612321_30	1237149.C900_00392	1.372e-53	198.0	COG5343@1|root,COG5343@2|Bacteria,4PNQ9@976|Bacteroidetes,47YF0@768503|Cytophagia	976|Bacteroidetes	S	HEAT repeats	-	-	-	-	-	-	-	-	-	-	-	-	HEAT_2
BYD3_k127_4612321_27	1237149.C900_00391	8.343e-69	244.0	COG3595@1|root,COG3595@2|Bacteria,4NJBA@976|Bacteroidetes,47MRP@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_4612321_22	1237149.C900_00390	1.658e-81	279.0	COG3595@1|root,COG3595@2|Bacteria,4NGRU@976|Bacteroidetes,47MSM@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	DUF4097
BYD3_k127_4612321_3	1237149.C900_01121	8.328e-258	811.0	COG2885@1|root,COG2885@2|Bacteria,4NHWF@976|Bacteroidetes,47MMG@768503|Cytophagia	976|Bacteroidetes	M	OmpA family	-	-	-	-	-	-	-	-	-	-	-	-	OmpA,PD40
BYD3_k127_4612321_1	1237149.C900_01122	0.0	1251.0	COG0466@1|root,COG0466@2|Bacteria,4NE1G@976|Bacteroidetes,47M84@768503|Cytophagia	976|Bacteroidetes	O	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner	lon	-	3.4.21.53	ko:K01338	ko04112,map04112	-	-	-	ko00000,ko00001,ko01000,ko01002	-	-	-	AAA,LON_substr_bdg,Lon_C
BYD3_k127_4612321_4	1124780.ANNU01000008_gene2631	3.535e-220	691.0	COG1220@1|root,COG1220@2|Bacteria,4NFI2@976|Bacteroidetes,47JSG@768503|Cytophagia	976|Bacteroidetes	O	this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis	hslU	-	-	ko:K03667	-	-	-	-	ko00000,ko03110	-	-	-	AAA_2,ClpB_D2-small
BYD3_k127_4612321_32	1237149.C900_01127	6.598e-45	168.0	COG2062@1|root,COG2062@2|Bacteria,4NQFM@976|Bacteroidetes,47R7I@768503|Cytophagia	976|Bacteroidetes	T	PFAM Phosphoglycerate mutase	sixA	-	-	ko:K08296	-	-	-	-	ko00000,ko01000	-	-	-	His_Phos_1
BYD3_k127_4612321_23	1239962.C943_02416	1.376e-78	273.0	COG1560@1|root,COG1560@2|Bacteria,4NQEF@976|Bacteroidetes	976|Bacteroidetes	M	Bacterial lipid A biosynthesis acyltransferase	-	-	2.3.1.241	ko:K02517	ko00540,ko01100,map00540,map01100	M00060	R05146	RC00037,RC00039	ko00000,ko00001,ko00002,ko01000,ko01005	-	-	-	Lip_A_acyltrans
BYD3_k127_4612321_29	1048983.EL17_04780	6.979e-56	198.0	COG3169@1|root,COG3169@2|Bacteria,4NQH4@976|Bacteroidetes,47QJ9@768503|Cytophagia	976|Bacteroidetes	S	Putative member of DMT superfamily (DUF486)	-	-	-	ko:K09922	-	-	-	-	ko00000	-	-	-	DMT_6
BYD3_k127_4612321_2	1237149.C900_01133	7.112e-306	943.0	COG0488@1|root,COG0488@2|Bacteria,4NES5@976|Bacteroidetes,47M5V@768503|Cytophagia	976|Bacteroidetes	S	ABC transporter	-	-	-	-	-	-	-	-	-	-	-	-	ABC_tran,ABC_tran_Xtn
BYD3_k127_4612321_34	1123276.KB893246_gene817	5.553e-43	157.0	2C8VT@1|root,32RN1@2|Bacteria,4NS78@976|Bacteroidetes,47R0I@768503|Cytophagia	976|Bacteroidetes	S	Protein of unknown function (DUF2795)	-	-	-	-	-	-	-	-	-	-	-	-	DUF2795
BYD3_k127_4612321_21	1237149.C900_01135	9.93e-85	287.0	COG1211@1|root,COG1211@2|Bacteria,4NMB5@976|Bacteroidetes,47P6K@768503|Cytophagia	976|Bacteroidetes	I	Catalyzes the formation of 4-diphosphocytidyl-2-C- methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4- phosphate (MEP)	ispD	GO:0003674,GO:0003824,GO:0016740,GO:0016772,GO:0016779,GO:0050518,GO:0070567	2.7.7.60	ko:K00991	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	M00096	R05633	RC00002	ko00000,ko00001,ko00002,ko01000	-	-	-	IspD
BYD3_k127_4612321_11	1279009.ADICEAN_03136	5.73e-178	562.0	COG0809@1|root,COG0809@2|Bacteria,4NF2T@976|Bacteroidetes,47J9B@768503|Cytophagia	976|Bacteroidetes	J	Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)	queA	-	2.4.99.17	ko:K07568	-	-	-	-	ko00000,ko01000,ko03016	-	-	-	Queuosine_synth
BYD3_k127_4612321_17	1237149.C900_01138	2.007e-123	401.0	COG0577@1|root,COG0577@2|Bacteria,4NECN@976|Bacteroidetes,47J9P@768503|Cytophagia	976|Bacteroidetes	V	ABC-type antimicrobial peptide transport system, permease component	-	-	-	ko:K02004	-	M00258	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	FtsX,MacB_PCD
BYD3_k127_4616147_46	1338011.BD94_1135	6.807e-42	164.0	COG1285@1|root,COG1285@2|Bacteria,4NN0A@976|Bacteroidetes,1I5ZJ@117743|Flavobacteriia,34Q31@308865|Elizabethkingia	976|Bacteroidetes	S	MgtC family	-	-	-	ko:K07507	-	-	-	-	ko00000,ko02000	9.B.20	-	-	MgtC
BYD3_k127_4616147_50	1227739.Hsw_0214	6.358e-28	123.0	COG3595@1|root,COG3595@2|Bacteria,4NSAQ@976|Bacteroidetes,47RTK@768503|Cytophagia	976|Bacteroidetes	S	Putative auto-transporter adhesin, head GIN domain	-	-	-	-	-	-	-	-	-	-	-	-	DUF2807
BYD3_k127_4616147_37	1048983.EL17_02965	4.025e-60	215.0	COG1739@1|root,COG1739@2|Bacteria,4NF0D@976|Bacteroidetes,47P9D@768503|Cytophagia	976|Bacteroidetes	S	PFAM Uncharacterised protein family UPF0029, Impact, N-terminal	yigZ	-	-	-	-	-	-	-	-	-	-	-	UPF0029
BYD3_k127_4616147_11	1123277.KB893181_gene2250	2.266e-170	544.0	COG0477@1|root,COG2814@2|Bacteria,4NFM7@976|Bacteroidetes,47N08@768503|Cytophagia	976|Bacteroidetes	EGP	Major facilitator superfamily	tetA	-	-	ko:K08151	-	M00668	-	-	ko00000,ko00002,ko01504,ko02000	2.A.1.2.38,2.A.1.2.39,2.A.1.2.4,2.A.1.2.41,2.A.1.2.68,2.A.1.2.75	-	-	MFS_1,Sugar_tr
BYD3_k127_4616147_28	762903.Pedsa_2935	6.12e-84	285.0	COG3279@1|root,COG3279@2|Bacteria,4NFWA@976|Bacteroidetes,1J04K@117747|Sphingobacteriia	976|Bacteroidetes	T	LytTr DNA-binding domain	-	-	-	ko:K02477	-	-	-	-	ko00000,ko02022	-	-	-	LytTR,Response_reg
BYD3_k127_4616147_25	1150600.ADIARSV_3836	1.626e-94	320.0	COG2972@1|root,COG2972@2|Bacteria,4NHG3@976|Bacteroidetes,1INSV@117747|Sphingobacteriia	976|Bacteroidetes	T	Histidine kinase	-	-	-	-	-	-	-	-	-	-	-	-	HATPase_c_5,His_kinase
BYD3_k127_4616147_52	1123248.KB893326_gene1333	4.47e-21	97.0	2EC7G@1|root,33661@2|Bacteria,4NWXP@976|Bacteroidetes,1IU01@117747|Sphingobacteriia	976|Bacteroidetes	S	Domain of unknown function (DUF4288)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4288
BYD3_k127_4616147_35	925409.KI911562_gene1783	5.513e-67	237.0	COG4758@1|root,COG4758@2|Bacteria,4NQRE@976|Bacteroidetes,1ISAD@117747|Sphingobacteriia	976|Bacteroidetes	S	membrane protein (DUF2154)	-	-	-	-	-	-	-	-	-	-	-	-	DUF2154
BYD3_k127_4616147_30	743722.Sph21_3744	1.244e-80	273.0	COG2197@1|root,COG2197@2|Bacteria,4NMX5@976|Bacteroidetes,1IXU1@117747|Sphingobacteriia	976|Bacteroidetes	K	SMART Signal transduction response regulator, receiver	-	-	-	-	-	-	-	-	-	-	-	-	GerE,Response_reg
BYD3_k127_4616147_17	743722.Sph21_3745	4.73e-147	486.0	COG4585@1|root,COG4585@2|Bacteria,4NG0M@976|Bacteroidetes,1IV2W@117747|Sphingobacteriia	976|Bacteroidetes	T	Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor	narQ	-	-	-	-	-	-	-	-	-	-	-	HATPase_c,HisKA_3,PAS_9,PilJ
BYD3_k127_4616147_41	1121859.KB890739_gene2206	7.256e-53	190.0	COG2146@1|root,COG2146@2|Bacteria,4NQQ8@976|Bacteroidetes,47QJ5@768503|Cytophagia	976|Bacteroidetes	P	TIGRFAM nitrite reductase NAD(P)H , small subunit	-	-	1.7.1.15	ko:K00363	ko00910,ko01120,map00910,map01120	M00530	R00787	RC00176	ko00000,ko00001,ko00002,ko01000	-	-	-	Rieske_2
BYD3_k127_4616147_1	926556.Echvi_1901	0.0	1224.0	COG1251@1|root,COG1251@2|Bacteria,4NE44@976|Bacteroidetes,47M7X@768503|Cytophagia	976|Bacteroidetes	C	Nitrite and sulphite reductase 4Fe-4S	-	-	1.7.1.15	ko:K00362	ko00910,ko01120,map00910,map01120	M00530	R00787	RC00176	ko00000,ko00001,ko00002,ko01000	-	-	-	Fer2_BFD,NIR_SIR,NIR_SIR_ferr,Pyr_redox_2
BYD3_k127_4616147_40	1392498.JQLH01000001_gene104	4.622e-58	208.0	COG1670@1|root,COG1670@2|Bacteria,4NMRH@976|Bacteroidetes,1I1FG@117743|Flavobacteriia,2PI7B@252356|Maribacter	976|Bacteroidetes	J	Domain of unknown function (DUF4202)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4202
BYD3_k127_4616147_44	1189612.A33Q_4430	1.996e-46	173.0	COG0394@1|root,COG0394@2|Bacteria,4NNQZ@976|Bacteroidetes,47R52@768503|Cytophagia	976|Bacteroidetes	T	Low molecular weight phosphotyrosine protein phosphatase	ptpA	-	3.1.3.48	ko:K01104	-	-	-	-	ko00000,ko01000	-	-	-	LMWPc
BYD3_k127_4616147_33	1237149.C900_03740	9.89e-77	269.0	28J2U@1|root,2Z8Z5@2|Bacteria,4NHYM@976|Bacteroidetes,47RCK@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_4616147_18	1237149.C900_03737	1.955e-141	460.0	COG1519@1|root,COG1519@2|Bacteria,4NESA@976|Bacteroidetes,47MDG@768503|Cytophagia	976|Bacteroidetes	M	PFAM 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase)	waaA	-	2.4.99.12,2.4.99.13,2.4.99.14,2.4.99.15	ko:K02527	ko00540,ko01100,map00540,map01100	M00060,M00080	R04658,R05074,R09763	RC00009,RC00077,RC00247	ko00000,ko00001,ko00002,ko01000,ko01003,ko01005	-	GT30	-	Glycos_transf_N
BYD3_k127_4616147_22	1237149.C900_03736	4.41e-110	364.0	COG1162@1|root,COG1162@2|Bacteria,4NE5H@976|Bacteroidetes,47JC5@768503|Cytophagia	976|Bacteroidetes	S	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit	rsgA	-	3.1.3.100	ko:K06949	ko00730,ko01100,map00730,map01100	-	R00615,R02135	RC00002,RC00017	ko00000,ko00001,ko01000,ko03009	-	-	-	RsgA_GTPase,RsgA_N
BYD3_k127_4616147_51	388413.ALPR1_05535	7.286e-28	123.0	COG1566@1|root,COG1566@2|Bacteria,4NVBT@976|Bacteroidetes,47VR7@768503|Cytophagia	976|Bacteroidetes	V	Protein of unknown function (DUF3667)	-	-	-	-	-	-	-	-	-	-	-	-	DUF3667
BYD3_k127_4616147_29	1237149.C900_04066	1.331e-82	283.0	COG1216@1|root,COG1216@2|Bacteria,4NJQR@976|Bacteroidetes,47MWK@768503|Cytophagia	976|Bacteroidetes	S	PFAM Glycosyl transferase family 2	-	-	-	-	-	-	-	-	-	-	-	-	Glycos_transf_2
BYD3_k127_4616147_48	1237149.C900_04061	1.93e-38	155.0	COG5653@1|root,COG5653@2|Bacteria,4NKJS@976|Bacteroidetes,47NWT@768503|Cytophagia	976|Bacteroidetes	M	Protein involved in cellulose biosynthesis	-	-	-	-	-	-	-	-	-	-	-	-	Acetyltransf_6,FemAB
BYD3_k127_4616147_49	1237149.C900_04060	3.663e-32	130.0	COG1898@1|root,COG1898@2|Bacteria,4PKN3@976|Bacteroidetes,47RJ6@768503|Cytophagia	976|Bacteroidetes	M	WxcM-like, C-terminal	-	-	-	-	-	-	-	-	-	-	-	-	FdtA
BYD3_k127_4616147_34	1237149.C900_04059	3.552e-75	255.0	COG4539@1|root,COG4539@2|Bacteria,4NQIX@976|Bacteroidetes,47Q6B@768503|Cytophagia	976|Bacteroidetes	S	Protein of unknown function (DUF962)	-	-	-	-	-	-	-	-	-	-	-	-	DUF962
BYD3_k127_4616147_36	1237149.C900_04058	2.952e-64	224.0	COG2050@1|root,COG2050@2|Bacteria,4P2ZC@976|Bacteroidetes	976|Bacteroidetes	Q	Domain of unknown function (DUF4442)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4442
BYD3_k127_4616147_13	1121904.ARBP01000005_gene4880	1.39e-157	504.0	COG1748@1|root,COG1748@2|Bacteria,4NFM8@976|Bacteroidetes	976|Bacteroidetes	E	Saccharopine dehydrogenase	-	-	-	-	-	-	-	-	-	-	-	-	Sacchrp_dh_C,Sacchrp_dh_NADP
BYD3_k127_4616147_7	761193.Runsl_1508	2.768e-245	767.0	COG0531@1|root,COG0531@2|Bacteria,4NDU2@976|Bacteroidetes,47JF7@768503|Cytophagia	976|Bacteroidetes	E	PFAM amino acid permease-associated region	-	-	-	ko:K03294	-	-	-	-	ko00000	2.A.3.2	-	-	AA_permease_2,AA_permease_C
BYD3_k127_4616147_42	1168289.AJKI01000031_gene1095	1.952e-52	192.0	COG0349@1|root,COG0349@2|Bacteria,4NP3B@976|Bacteroidetes,2FN2U@200643|Bacteroidia,3XJDC@558415|Marinilabiliaceae	976|Bacteroidetes	J	3'-5' exonuclease	rnd	-	-	-	-	-	-	-	-	-	-	-	DNA_pol_A_exo1
BYD3_k127_4616147_2	485917.Phep_3887	0.0	1150.0	COG3408@1|root,COG3408@2|Bacteria,4NESP@976|Bacteroidetes,1INWR@117747|Sphingobacteriia	976|Bacteroidetes	G	PFAM Bacterial alpha-L-rhamnosidase	-	-	3.2.1.40	ko:K05989	-	-	-	-	ko00000,ko01000	-	-	-	Bac_rhamnosid,Bac_rhamnosid6H,Bac_rhamnosid_C,Bac_rhamnosid_N
BYD3_k127_4616147_27	1237149.C900_05503	4.168e-93	312.0	28JIP@1|root,2Z82C@2|Bacteria,4NFN9@976|Bacteroidetes,47PJT@768503|Cytophagia	976|Bacteroidetes	S	S1 P1 nuclease	-	-	-	-	-	-	-	-	-	-	-	-	S1-P1_nuclease
BYD3_k127_4616147_43	1237149.C900_03851	2.137e-51	191.0	COG1723@1|root,COG1723@2|Bacteria,4NFED@976|Bacteroidetes	976|Bacteroidetes	S	Uncharacterised ACR, YagE family COG1723	-	-	-	-	-	-	-	-	-	-	-	-	DUF155
BYD3_k127_4616147_32	1237149.C900_03853	6.373e-79	271.0	COG3271@1|root,COG3271@2|Bacteria,4NN8E@976|Bacteroidetes	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	Peptidase_C39_2
BYD3_k127_4616147_10	1237149.C900_03854	3.695e-177	567.0	COG0189@1|root,COG0189@2|Bacteria,4NF2R@976|Bacteroidetes,47P1C@768503|Cytophagia	976|Bacteroidetes	HJ	RimK-like ATPgrasp N-terminal domain	-	-	-	-	-	-	-	-	-	-	-	-	Acetyltransf_1,Dala_Dala_lig_C,RLAN,RimK
BYD3_k127_4616147_16	1237149.C900_03855	3.712e-147	476.0	COG2170@1|root,COG2170@2|Bacteria,4NGA3@976|Bacteroidetes	976|Bacteroidetes	S	Glutamate-cysteine ligase family 2(GCS2)	-	-	-	ko:K06048	-	-	-	-	ko00000,ko01000	-	-	-	GCS2
BYD3_k127_4616147_39	1123234.AUKI01000023_gene1960	3.633e-59	212.0	COG3931@1|root,COG3931@2|Bacteria,4NMA3@976|Bacteroidetes,1I1FX@117743|Flavobacteriia	976|Bacteroidetes	E	N-formylglutamate amidohydrolase	-	-	-	-	-	-	-	-	-	-	-	-	FGase
BYD3_k127_4616147_45	1338011.BD94_3358	2.814e-45	171.0	COG1595@1|root,COG1595@2|Bacteria,4NETF@976|Bacteroidetes,1HXWP@117743|Flavobacteriia,34QDV@308865|Elizabethkingia	976|Bacteroidetes	K	Belongs to the sigma-70 factor family. ECF subfamily	sigG	-	-	ko:K03088	-	-	-	-	ko00000,ko03021	-	-	-	Sigma70_r2,Sigma70_r4_2
BYD3_k127_4616147_4	761193.Runsl_3384	9.564e-267	827.0	COG3534@1|root,COG3534@2|Bacteria,4NECK@976|Bacteroidetes,47JK0@768503|Cytophagia	976|Bacteroidetes	G	Alpha-L-arabinofuranosidase C-terminus	-	-	3.2.1.55	ko:K01209	ko00520,map00520	-	R01762	-	ko00000,ko00001,ko01000	-	GH51	-	Alpha-L-AF_C
BYD3_k127_4616147_14	1237149.C900_05504	2.231e-155	501.0	COG0373@1|root,COG0373@2|Bacteria,4NFTY@976|Bacteroidetes,47JF5@768503|Cytophagia	976|Bacteroidetes	H	Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA)	hemA	-	1.2.1.70	ko:K02492	ko00860,ko01100,ko01110,ko01120,map00860,map01100,map01110,map01120	M00121	R04109	RC00055,RC00149	ko00000,ko00001,ko00002,ko01000	-	-	-	GlutR_N,GlutR_dimer,Shikimate_DH
BYD3_k127_4616147_38	926549.KI421517_gene155	9.201e-60	218.0	COG1555@1|root,COG1555@2|Bacteria,4NK4K@976|Bacteroidetes,47KXV@768503|Cytophagia	976|Bacteroidetes	L	Helix-hairpin-helix motif	comEA	-	-	-	-	-	-	-	-	-	-	-	HHH_3
BYD3_k127_4616147_0	1237149.C900_05507	0.0	1505.0	COG1061@1|root,COG1112@1|root,COG1061@2|Bacteria,COG1112@2|Bacteria,4NF2S@976|Bacteroidetes,47KY5@768503|Cytophagia	976|Bacteroidetes	L	Superfamily I DNA and RNA	-	-	-	-	-	-	-	-	-	-	-	-	AAA_11,AAA_12,DUF4011
BYD3_k127_4616147_31	1237149.C900_04007	3.464e-79	269.0	COG2940@1|root,COG2940@2|Bacteria,4NM5I@976|Bacteroidetes	976|Bacteroidetes	S	SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain	-	-	-	-	-	-	-	-	-	-	-	-	SET
BYD3_k127_4616147_8	1121904.ARBP01000002_gene6913	8.72e-198	619.0	COG0174@1|root,COG0174@2|Bacteria,4NGG2@976|Bacteroidetes,47JHR@768503|Cytophagia	976|Bacteroidetes	E	PFAM glutamine synthetase catalytic region	glnII	-	6.3.1.2	ko:K01915	ko00220,ko00250,ko00630,ko00910,ko01100,ko01120,ko01230,ko02020,ko04217,ko04724,ko04727,map00220,map00250,map00630,map00910,map01100,map01120,map01230,map02020,map04217,map04724,map04727	-	R00253	RC00010,RC02798	ko00000,ko00001,ko01000,ko04147	-	-	-	Gln-synt_C,Gln-synt_N
BYD3_k127_4616147_23	388413.ALPR1_05045	1.267e-107	361.0	28IEX@1|root,2Z8GX@2|Bacteria,4NGBY@976|Bacteroidetes,47NK3@768503|Cytophagia	976|Bacteroidetes	S	Putative beta-barrel porin-2, OmpL-like. bbp2	-	-	-	-	-	-	-	-	-	-	-	-	BBP2
BYD3_k127_4616147_9	1185876.BN8_00761	9.237e-196	619.0	COG0004@1|root,COG0004@2|Bacteria,4NDV2@976|Bacteroidetes,47K09@768503|Cytophagia	976|Bacteroidetes	P	Ammonium Transporter	-	-	-	ko:K03320	-	-	-	-	ko00000,ko02000	1.A.11	-	-	Ammonium_transp
BYD3_k127_4616147_5	1237149.C900_01149	2.127e-266	833.0	COG0367@1|root,COG0367@2|Bacteria,4NFQ3@976|Bacteroidetes,47JSF@768503|Cytophagia	976|Bacteroidetes	E	Asparagine synthase	asnB	-	6.3.5.4	ko:K01953	ko00250,ko01100,ko01110,map00250,map01100,map01110	-	R00578	RC00010	ko00000,ko00001,ko01000,ko01002	-	-	-	Asn_synthase,GATase_7
BYD3_k127_4616147_20	658187.LDG_6498	1.471e-122	404.0	COG2170@1|root,COG2170@2|Bacteria,1MX4N@1224|Proteobacteria,1RRZ1@1236|Gammaproteobacteria,1JCFE@118969|Legionellales	118969|Legionellales	H	ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity	-	-	-	ko:K06048	-	-	-	-	ko00000,ko01000	-	-	-	GCS2
BYD3_k127_4616147_56	525373.HMPREF0766_10895	2.84e-06	54.0	2ES5S@1|root,33JQJ@2|Bacteria,4NZ72@976|Bacteroidetes,1IY1Z@117747|Sphingobacteriia	976|Bacteroidetes	S	Domain of unknown function (DUF4359)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4359
BYD3_k127_4616147_47	1124780.ANNU01000006_gene2820	1.147e-41	163.0	COG0791@1|root,COG0791@2|Bacteria,4NSZJ@976|Bacteroidetes,47PEH@768503|Cytophagia	976|Bacteroidetes	M	Cell wall-associated hydrolase (invasion-associated protein)	spr	-	-	ko:K13695	-	-	-	-	ko00000,ko01002	-	-	-	LysM,NLPC_P60
BYD3_k127_4616147_19	1450525.JATV01000006_gene1124	6.352e-139	448.0	COG1446@1|root,COG1446@2|Bacteria,4NE3D@976|Bacteroidetes,1HXFB@117743|Flavobacteriia,2NTK7@237|Flavobacterium	976|Bacteroidetes	E	Asparaginase	aspG	GO:0005575,GO:0005623,GO:0042597,GO:0044464	3.4.19.5,3.5.1.26	ko:K01444,ko:K13051	ko00511,ko04142,map00511,map04142	-	-	-	ko00000,ko00001,ko01000,ko01002	-	-	-	Asparaginase_2
BYD3_k127_4616147_21	1237149.C900_04118	1.388e-110	363.0	COG3142@1|root,COG3142@2|Bacteria,4NINY@976|Bacteroidetes,47NRE@768503|Cytophagia	976|Bacteroidetes	P	Participates in the control of copper homeostasis	cutC	-	-	ko:K06201	-	-	-	-	ko00000	-	-	-	CutC
BYD3_k127_4616147_3	926549.KI421517_gene2843	1.718e-291	923.0	COG4206@1|root,COG4206@2|Bacteria,4PKNV@976|Bacteroidetes,47XXQ@768503|Cytophagia	976|Bacteroidetes	H	Outer membrane protein beta-barrel family	-	-	-	-	-	-	-	-	-	-	-	-	CarbopepD_reg_2,CarboxypepD_reg,OMP_b-brl_3,Plug
BYD3_k127_4616147_15	926549.KI421517_gene2842	1.704e-154	495.0	COG2972@1|root,COG2972@2|Bacteria,4NH1Q@976|Bacteroidetes,47ME5@768503|Cytophagia	976|Bacteroidetes	T	Histidine kinase	-	-	-	-	-	-	-	-	-	-	-	-	His_kinase
BYD3_k127_4616147_24	926549.KI421517_gene2841	1.92e-98	326.0	COG3279@1|root,COG3279@2|Bacteria,4NIXU@976|Bacteroidetes,47M0C@768503|Cytophagia	976|Bacteroidetes	T	LytTr DNA-binding domain	-	-	-	-	-	-	-	-	-	-	-	-	LytTR,Response_reg
BYD3_k127_4616147_12	1166018.FAES_5466	6.796e-168	537.0	COG0500@1|root,COG0500@2|Bacteria,4PPPH@976|Bacteroidetes	976|Bacteroidetes	Q	Putative zinc binding domain	-	-	-	-	-	-	-	-	-	-	-	-	Methyltransf_13,Methyltransf_14,Methyltransf_23
BYD3_k127_4616147_26	504472.Slin_5717	1.904e-94	318.0	COG0451@1|root,COG0451@2|Bacteria,4NG8Y@976|Bacteroidetes,47N8X@768503|Cytophagia	976|Bacteroidetes	GM	NAD dependent epimerase/dehydratase family	-	-	-	-	-	-	-	-	-	-	-	-	Epimerase
BYD3_k127_4616147_6	1237149.C900_03967	3.038e-260	809.0	COG0606@1|root,COG0606@2|Bacteria,4NE0G@976|Bacteroidetes,47MUV@768503|Cytophagia	976|Bacteroidetes	O	magnesium chelatase	comM	-	-	ko:K07391	-	-	-	-	ko00000	-	-	-	ChlI,Mg_chelatase,Mg_chelatase_C
BYD3_k127_4616147_55	1279009.ADICEAN_04193	2.39e-08	55.0	COG1132@1|root,COG1132@2|Bacteria,4NE2D@976|Bacteroidetes,47JQI@768503|Cytophagia	976|Bacteroidetes	V	ABC transporter transmembrane region	msbA	-	-	ko:K06147,ko:K11085	ko02010,map02010	-	-	-	ko00000,ko00001,ko01000,ko02000	3.A.1.106,3.A.1.109,3.A.1.21	-	-	ABC_membrane,ABC_tran
BYD3_k127_4633417_15	1150600.ADIARSV_3742	1.062e-15	82.0	2CDBH@1|root,2ZXF6@2|Bacteria,4P77Q@976|Bacteroidetes	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_4633417_8	1237149.C900_02080	3.292e-60	217.0	COG4585@1|root,COG4585@2|Bacteria,4NNE1@976|Bacteroidetes,47PFT@768503|Cytophagia	976|Bacteroidetes	T	Histidine kinase-like ATPases	-	-	-	-	-	-	-	-	-	-	-	-	HATPase_c,HisKA_3
BYD3_k127_4633417_6	1237149.C900_02079	2.364e-84	285.0	COG2197@1|root,COG2197@2|Bacteria,4NJW3@976|Bacteroidetes,47NG7@768503|Cytophagia	976|Bacteroidetes	KT	Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain	-	-	-	-	-	-	-	-	-	-	-	-	GerE,Response_reg
BYD3_k127_4633417_2	1123278.KB893435_gene591	1.425e-98	328.0	COG0726@1|root,COG0726@2|Bacteria,4NJK7@976|Bacteroidetes,47MUF@768503|Cytophagia	976|Bacteroidetes	G	Polysaccharide deacetylase	-	-	-	-	-	-	-	-	-	-	-	-	Polysacc_deac_1
BYD3_k127_4633417_3	1123277.KB893174_gene5928	2.383e-95	320.0	COG3279@1|root,COG3279@2|Bacteria,4NFPV@976|Bacteroidetes,47PTI@768503|Cytophagia	976|Bacteroidetes	T	Response regulator of the LytR AlgR family	-	-	-	ko:K02477	-	-	-	-	ko00000,ko02022	-	-	-	LytTR,Response_reg
BYD3_k127_4633417_1	700598.Niako_2037	4.044e-104	364.0	COG0457@1|root,COG2972@1|root,COG0457@2|Bacteria,COG2972@2|Bacteria,4NF45@976|Bacteroidetes,1IXAB@117747|Sphingobacteriia	976|Bacteroidetes	T	Signal transduction histidine kinase, LytS	-	-	-	-	-	-	-	-	-	-	-	-	7TMR-DISMED2,7TMR-DISM_7TM,His_kinase,TPR_10,TPR_12,TPR_7,TPR_8
BYD3_k127_4633417_0	1123276.KB893275_gene2320	4.769e-119	398.0	COG0671@1|root,COG0671@2|Bacteria,4NF9W@976|Bacteroidetes,47M2K@768503|Cytophagia	976|Bacteroidetes	I	PFAM Phosphatidic acid phosphatase type 2 haloperoxidase	-	-	-	-	-	-	-	-	-	-	-	-	PAP2
BYD3_k127_4633417_14	1202532.FF52_08374	1.143e-17	85.0	COG2827@1|root,COG2827@2|Bacteria,4NUW1@976|Bacteroidetes,1I5HH@117743|Flavobacteriia	976|Bacteroidetes	L	GIY-YIG catalytic domain	-	-	-	ko:K07461	-	-	-	-	ko00000	-	-	-	GIY-YIG
BYD3_k127_4633417_11	760192.Halhy_5034	2.736e-34	136.0	2E5WH@1|root,30K07@2|Bacteria,4P5HE@976|Bacteroidetes	976|Bacteroidetes	J	23S rRNA-intervening sequence protein	-	-	-	-	-	-	-	-	-	-	-	-	23S_rRNA_IVP
BYD3_k127_4633417_7	929556.Solca_4384	1.029e-70	248.0	COG1670@1|root,COG1670@2|Bacteria,4NM3W@976|Bacteroidetes,1IRVJ@117747|Sphingobacteriia	976|Bacteroidetes	J	Acetyltransferase (GNAT) domain	-	-	-	-	-	-	-	-	-	-	-	-	Acetyltransf_3
BYD3_k127_4633417_12	1121904.ARBP01000001_gene5886	7.828e-33	138.0	COG0589@1|root,COG0589@2|Bacteria	2|Bacteria	T	AMP binding	uspA	-	-	-	-	-	-	-	-	-	-	-	DUF2007,Usp
BYD3_k127_4633417_4	1279009.ADICEAN_01644	2.853e-86	291.0	COG2085@1|root,COG2085@2|Bacteria,4NPSZ@976|Bacteroidetes,47UK8@768503|Cytophagia	976|Bacteroidetes	S	NADP oxidoreductase coenzyme F420-dependent	-	-	1.5.1.40	ko:K06988	-	-	-	-	ko00000,ko01000	-	-	-	F420_oxidored
BYD3_k127_4633417_9	468059.AUHA01000005_gene2615	1.465e-46	171.0	COG1733@1|root,COG1733@2|Bacteria,4NPDU@976|Bacteroidetes	976|Bacteroidetes	K	HxlR-like helix-turn-helix	-	-	-	-	-	-	-	-	-	-	-	-	HxlR
BYD3_k127_4633417_5	1107311.Q767_15730	8.585e-86	288.0	COG0053@1|root,COG0053@2|Bacteria,4NJRM@976|Bacteroidetes,1HXI5@117743|Flavobacteriia	976|Bacteroidetes	P	Cation efflux family	-	-	-	-	-	-	-	-	-	-	-	-	Cation_efflux
BYD3_k127_4633417_16	761193.Runsl_4416	0.0005623	44.0	COG5646@1|root,COG5646@2|Bacteria,4NSDH@976|Bacteroidetes,47R0R@768503|Cytophagia	976|Bacteroidetes	S	Domain of unknown function (DU1801)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1801
BYD3_k127_4633417_13	1536770.R50345_17540	1.301e-18	88.0	COG5646@1|root,COG5646@2|Bacteria,1V6QB@1239|Firmicutes,4HINV@91061|Bacilli,26YRN@186822|Paenibacillaceae	91061|Bacilli	S	Domain of unknown function (DU1801)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1801
BYD3_k127_4633417_10	485918.Cpin_6764	9.965e-38	145.0	COG0640@1|root,COG0640@2|Bacteria,4NTCN@976|Bacteroidetes,1IYA0@117747|Sphingobacteriia	976|Bacteroidetes	K	regulatory protein, arsR	-	-	-	-	-	-	-	-	-	-	-	-	HTH_20,HTH_5
BYD3_k127_4697900_0	1121904.ARBP01000002_gene7293	6.314e-240	765.0	COG0577@1|root,COG0577@2|Bacteria,4NDUK@976|Bacteroidetes,47JJN@768503|Cytophagia	976|Bacteroidetes	V	FtsX-like permease family	-	-	-	ko:K02004	-	M00258	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	FtsX,MacB_PCD
BYD3_k127_4697900_7	888059.HMPREF9071_2043	6.555e-15	89.0	COG4447@1|root,COG4447@2|Bacteria,4NESU@976|Bacteroidetes,1HXIG@117743|Flavobacteriia,1ER4Y@1016|Capnocytophaga	976|Bacteroidetes	G	BNR Asp-box repeat protein	-	-	-	-	-	-	-	-	-	-	-	-	BNR,BNR_6,Sortilin-Vps10
BYD3_k127_4697900_8	700598.Niako_0682	2.621e-14	87.0	COG3291@1|root,COG3291@2|Bacteria,4PN6M@976|Bacteroidetes,1IW1H@117747|Sphingobacteriia	976|Bacteroidetes	S	Chondroitinase B	-	-	-	-	-	-	-	-	-	-	-	-	Chondroitinas_B
BYD3_k127_4697900_3	1434325.AZQN01000004_gene1899	2.364e-74	265.0	2BQ9X@1|root,32J4V@2|Bacteria	2|Bacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_4697900_1	760192.Halhy_0728	8.631e-164	519.0	COG0684@1|root,COG0684@2|Bacteria,4NF3M@976|Bacteroidetes,1IR2I@117747|Sphingobacteriia	976|Bacteroidetes	H	SPTR Demethylmenaquinone methyltransferase-like protein	-	-	-	-	-	-	-	-	-	-	-	-	RraA-like
BYD3_k127_4697900_4	1462527.CCDM010000003_gene3864	2.004e-59	209.0	COG3324@1|root,COG3324@2|Bacteria	2|Bacteria	E	translation initiation factor activity	-	-	-	ko:K06996	-	-	-	-	ko00000	-	-	-	Glyoxalase
BYD3_k127_4697900_5	1005058.UMN179_00748	3.552e-29	119.0	COG1733@1|root,COG1733@2|Bacteria,1MZ6G@1224|Proteobacteria,1S941@1236|Gammaproteobacteria,1YAWC@135625|Pasteurellales	135625|Pasteurellales	K	HxlR-like helix-turn-helix	-	-	-	-	-	-	-	-	-	-	-	-	HxlR
BYD3_k127_4697900_2	153721.MYP_3327	2.489e-93	314.0	COG0702@1|root,COG0702@2|Bacteria,4NGMK@976|Bacteroidetes,47M3G@768503|Cytophagia	976|Bacteroidetes	GM	NmrA-like family	-	-	-	-	-	-	-	-	-	-	-	-	NAD_binding_10,NmrA
BYD3_k127_4721917_20	700598.Niako_6312	6.472e-89	299.0	COG0744@1|root,COG0744@2|Bacteria,4NF90@976|Bacteroidetes,1IRZ0@117747|Sphingobacteriia	976|Bacteroidetes	M	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors	mtgA	-	2.4.1.129	ko:K03814	ko00550,map00550	-	-	-	ko00000,ko00001,ko01000,ko01003,ko01011	-	GT51	-	Transgly
BYD3_k127_4721917_43	1123277.KB893228_gene2104	1.583e-43	161.0	COG3254@1|root,COG3254@2|Bacteria,4NQAA@976|Bacteroidetes,47QI3@768503|Cytophagia	976|Bacteroidetes	S	L-rhamnose mutarotase	-	-	5.1.3.32	ko:K03534	-	-	R10819	RC00563	ko00000,ko01000	-	-	-	rhaM
BYD3_k127_4721917_13	1123248.KB893318_gene4095	5.753e-125	406.0	COG3618@1|root,COG3618@2|Bacteria,4NFGB@976|Bacteroidetes,1INSJ@117747|Sphingobacteriia	976|Bacteroidetes	S	PFAM amidohydrolase	-	-	-	ko:K07046	ko00051,ko01120,map00051,map01120	-	R10689	RC00537	ko00000,ko00001,ko01000	-	-	-	Amidohydro_2
BYD3_k127_4721917_12	1123277.KB893217_gene4603	1.667e-133	430.0	COG1028@1|root,COG1028@2|Bacteria,4NH6R@976|Bacteroidetes,47KYG@768503|Cytophagia	976|Bacteroidetes	IQ	Enoyl-(Acyl carrier protein) reductase	-	-	-	ko:K18333	ko00051,ko01120,map00051,map01120	-	R08926	RC00066	ko00000,ko00001	-	-	-	adh_short_C2
BYD3_k127_4721917_26	1229487.AMYW01000007_gene3208	1.702e-80	284.0	COG4487@1|root,COG4487@2|Bacteria,4NGZ9@976|Bacteroidetes,1HZ50@117743|Flavobacteriia,2NV85@237|Flavobacterium	976|Bacteroidetes	S	Uncharacterized protein conserved in bacteria (DUF2130)	-	-	-	-	-	-	-	-	-	-	-	-	DUF2130
BYD3_k127_4721917_35	1120965.AUBV01000013_gene1318	1.275e-58	214.0	COG2378@1|root,COG2378@2|Bacteria,4NN6R@976|Bacteroidetes,47QC2@768503|Cytophagia	976|Bacteroidetes	K	WYL domain	-	-	-	-	-	-	-	-	-	-	-	-	HTH_11,WYL
BYD3_k127_4721917_2	926549.KI421517_gene1657	6.11e-220	687.0	COG4952@1|root,COG4952@2|Bacteria,4NFWW@976|Bacteroidetes,47KMM@768503|Cytophagia	976|Bacteroidetes	M	TIGRFAM L-rhamnose catabolism isomerase, Pseudomonas stutzeri subtype	-	-	5.3.1.14	ko:K01820	ko00040,ko00051,ko01120,map00040,map00051,map01120	-	R01906,R02437,R06589	RC00376,RC00434,RC00516	ko00000,ko00001,ko01000	-	-	-	-
BYD3_k127_4721917_0	700598.Niako_3660	0.0	1197.0	COG3347@1|root,COG4221@1|root,COG3347@2|Bacteria,COG4221@2|Bacteria,4NEM0@976|Bacteroidetes,1IQ2J@117747|Sphingobacteriia	976|Bacteroidetes	IQ	rhamnulose-1-phosphate aldolase alcohol dehydrogenase	-	-	-	-	-	-	-	-	-	-	-	-	Aldolase_II,adh_short,adh_short_C2
BYD3_k127_4721917_46	1123248.KB893314_gene3565	5.479e-33	132.0	COG0784@1|root,COG0784@2|Bacteria	1123248.KB893314_gene3565|-	T	Response regulator, receiver	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_4721917_1	1279009.ADICEAN_02781	1.771e-264	858.0	COG0642@1|root,COG1352@1|root,COG2201@1|root,COG1352@2|Bacteria,COG2201@2|Bacteria,COG2205@2|Bacteria,4PKNJ@976|Bacteroidetes,47JHY@768503|Cytophagia	976|Bacteroidetes	NT	protein-glutamate methylesterase	-	-	2.1.1.80,3.1.1.61	ko:K00575,ko:K13924	ko02020,ko02030,map02020,map02030	M00506	-	-	ko00000,ko00001,ko00002,ko01000,ko02022,ko02035	-	-	-	CheB_methylest,CheR,CheR_N,HATPase_c,HisKA,PAS_10,PAS_3,PAS_4,PAS_8,PAS_9,Response_reg
BYD3_k127_4721917_17	1123248.KB893328_gene869	2.123e-108	359.0	COG0327@1|root,COG0327@2|Bacteria,4NFJ3@976|Bacteroidetes,1IYFQ@117747|Sphingobacteriia	976|Bacteroidetes	S	NIF3 (NGG1p interacting factor 3)	-	-	-	-	-	-	-	-	-	-	-	-	NIF3
BYD3_k127_4721917_14	1123248.KB893319_gene4001	5.106e-122	397.0	COG0657@1|root,COG0657@2|Bacteria,4NKQT@976|Bacteroidetes,1IVD0@117747|Sphingobacteriia	976|Bacteroidetes	I	alpha/beta hydrolase fold	-	-	-	-	-	-	-	-	-	-	-	-	Abhydrolase_3
BYD3_k127_4721917_16	1123248.KB893348_gene172	1.602e-109	363.0	COG0491@1|root,COG0491@2|Bacteria,4NF10@976|Bacteroidetes,1IS5K@117747|Sphingobacteriia	976|Bacteroidetes	S	Metallo-beta-lactamase superfamily	-	-	-	-	-	-	-	-	-	-	-	-	Lactamase_B
BYD3_k127_4721917_4	1121904.ARBP01000015_gene179	8.932e-195	635.0	COG0577@1|root,COG0577@2|Bacteria,4NDUK@976|Bacteroidetes,47NTJ@768503|Cytophagia	976|Bacteroidetes	V	MacB-like periplasmic core domain	-	-	-	ko:K02004	-	M00258	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	FtsX,MacB_PCD
BYD3_k127_4721917_48	1279009.ADICEAN_01481	6.411e-29	127.0	28M3Z@1|root,32ZEY@2|Bacteria,4NUZS@976|Bacteroidetes,47SGM@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_4721917_18	1185876.BN8_05055	2.193e-95	321.0	COG3705@1|root,COG3705@2|Bacteria,4NPDC@976|Bacteroidetes,47QQG@768503|Cytophagia	976|Bacteroidetes	E	Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_4721917_15	1134474.O59_001270	1.987e-113	374.0	COG1295@1|root,COG1295@2|Bacteria,1R9UY@1224|Proteobacteria,1S11F@1236|Gammaproteobacteria,1FI1D@10|Cellvibrio	1236|Gammaproteobacteria	S	Virulence factor BrkB	-	-	-	ko:K07058	-	-	-	-	ko00000	-	-	-	Virul_fac_BrkB
BYD3_k127_4721917_52	929703.KE386491_gene3761	3.746e-10	68.0	COG3637@1|root,COG3637@2|Bacteria,4NV08@976|Bacteroidetes,47RYI@768503|Cytophagia	976|Bacteroidetes	M	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety	-	-	-	-	-	-	-	-	-	-	-	-	OMP_b-brl
BYD3_k127_4721917_21	468059.AUHA01000002_gene847	3.695e-88	295.0	COG0225@1|root,COG0225@2|Bacteria,4NMAJ@976|Bacteroidetes,1IXDR@117747|Sphingobacteriia	976|Bacteroidetes	O	Peptide methionine sulfoxide reductase	msrA1	-	1.8.4.11	ko:K07304	-	-	-	-	ko00000,ko01000	-	-	-	PMSR
BYD3_k127_4721917_40	761193.Runsl_1039	2.462e-44	166.0	COG0784@1|root,COG0784@2|Bacteria,4NR3J@976|Bacteroidetes,47QYW@768503|Cytophagia	976|Bacteroidetes	T	cheY-homologous receiver domain	-	-	-	-	-	-	-	-	-	-	-	-	Response_reg
BYD3_k127_4721917_36	471854.Dfer_3182	4.71e-57	206.0	COG3652@1|root,COG3652@2|Bacteria,4NQE9@976|Bacteroidetes,47QZE@768503|Cytophagia	976|Bacteroidetes	S	Domain of unknown function (DUF4142)	-	-	-	ko:K08995	-	-	-	-	ko00000	-	-	-	DUF4142
BYD3_k127_4721917_49	1123277.KB893180_gene2342	2.316e-28	120.0	2E32R@1|root,32Y2Y@2|Bacteria,4NVIY@976|Bacteroidetes	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_4721917_47	251229.Chro_5576	4.123e-30	131.0	COG2207@1|root,COG2207@2|Bacteria,1G0TY@1117|Cyanobacteria,3VKYM@52604|Pleurocapsales	1117|Cyanobacteria	K	COGs COG4977 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain	-	-	-	ko:K07506	-	-	-	-	ko00000,ko03000	-	-	-	HTH_18
BYD3_k127_4721917_31	700598.Niako_6798	6.051e-67	236.0	COG3279@1|root,COG3279@2|Bacteria,4NIJQ@976|Bacteroidetes,1IS76@117747|Sphingobacteriia	976|Bacteroidetes	K	SMART Signal transduction response regulator, receiver	-	-	-	-	-	-	-	-	-	-	-	-	LytTR,Response_reg
BYD3_k127_4721917_34	1237149.C900_03864	1.519e-59	220.0	COG2972@1|root,COG2972@2|Bacteria,4NH1Q@976|Bacteroidetes,47PMI@768503|Cytophagia	976|Bacteroidetes	T	Histidine kinase	-	-	-	-	-	-	-	-	-	-	-	-	His_kinase
BYD3_k127_4721917_22	1279009.ADICEAN_01623	5.258e-86	293.0	COG1073@1|root,COG1073@2|Bacteria,4NGDK@976|Bacteroidetes,47Q3Y@768503|Cytophagia	976|Bacteroidetes	S	Alpha/beta hydrolase family	-	-	-	-	-	-	-	-	-	-	-	-	Abhydrolase_1,Abhydrolase_4,Abhydrolase_6,Hydrolase_4
BYD3_k127_4721917_37	1048983.EL17_00425	2.224e-52	192.0	COG1309@1|root,COG1309@2|Bacteria,4NH7V@976|Bacteroidetes,47X8X@768503|Cytophagia	976|Bacteroidetes	K	Bacterial regulatory proteins, tetR family	-	-	-	-	-	-	-	-	-	-	-	-	TetR_C_13,TetR_C_4,TetR_N
BYD3_k127_4721917_29	760192.Halhy_1393	1.744e-67	238.0	COG3279@1|root,COG3279@2|Bacteria,4NHDT@976|Bacteroidetes	976|Bacteroidetes	T	Two component transcriptional regulator, lyttr family	-	-	-	-	-	-	-	-	-	-	-	-	LytTR,Response_reg
BYD3_k127_4721917_33	760192.Halhy_1394	2.083e-66	241.0	COG2972@1|root,COG2972@2|Bacteria,4NFDP@976|Bacteroidetes,1ISFM@117747|Sphingobacteriia	976|Bacteroidetes	T	Histidine kinase	-	-	-	-	-	-	-	-	-	-	-	-	His_kinase
BYD3_k127_4721917_51	929556.Solca_1770	1.522e-24	103.0	2DPXY@1|root,333V8@2|Bacteria,4NX4Y@976|Bacteroidetes,1IUB1@117747|Sphingobacteriia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_4721917_41	929703.KE386491_gene2218	5.777e-44	166.0	COG1595@1|root,COG1595@2|Bacteria,4NNBY@976|Bacteroidetes,47PH5@768503|Cytophagia	976|Bacteroidetes	K	RNA polymerase sigma factor, sigma-70 family	-	-	-	ko:K03088	-	-	-	-	ko00000,ko03021	-	-	-	Sigma70_r2,Sigma70_r4_2
BYD3_k127_4721917_45	504472.Slin_2374	2.257e-39	160.0	COG3712@1|root,COG3712@2|Bacteria,4NMA2@976|Bacteroidetes,47PEK@768503|Cytophagia	976|Bacteroidetes	PT	Domain of unknown function (DUF4974)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4974,FecR
BYD3_k127_4721917_5	1237149.C900_00263	2.525e-194	643.0	COG1404@1|root,COG3291@1|root,COG1404@2|Bacteria,COG3291@2|Bacteria,4NGRJ@976|Bacteroidetes,47JD6@768503|Cytophagia	976|Bacteroidetes	O	PFAM Pregnancy-associated plasma protein-A	fpp2	-	-	-	-	-	-	-	-	-	-	-	Peptidase_M43
BYD3_k127_4721917_23	929556.Solca_2910	6.941e-85	287.0	COG3279@1|root,COG3279@2|Bacteria,4NI3K@976|Bacteroidetes,1J04E@117747|Sphingobacteriia	976|Bacteroidetes	K	Response regulator of the LytR AlgR family	-	-	-	-	-	-	-	-	-	-	-	-	LytTR,Response_reg
BYD3_k127_4721917_32	485918.Cpin_5597	1.326e-66	240.0	COG2972@1|root,COG2972@2|Bacteria,4NHM5@976|Bacteroidetes,1IRRM@117747|Sphingobacteriia	976|Bacteroidetes	T	PFAM histidine kinase	-	-	-	-	-	-	-	-	-	-	-	-	HATPase_c_5,His_kinase
BYD3_k127_4721917_19	1121904.ARBP01000008_gene3398	7.537e-93	315.0	COG3055@1|root,COG3055@2|Bacteria,4NG50@976|Bacteroidetes,47K6N@768503|Cytophagia	976|Bacteroidetes	DZ	Galactose oxidase, central domain	nanM	-	-	-	-	-	-	-	-	-	-	-	Kelch_1,Kelch_3,Kelch_4,Kelch_6
BYD3_k127_4721917_42	1250005.PHEL85_1126	6.06e-44	177.0	28J4T@1|root,2Z90P@2|Bacteria,4NHUC@976|Bacteroidetes,1HZE4@117743|Flavobacteriia	976|Bacteroidetes	S	Domain of unknown function (DUF4270)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4270
BYD3_k127_4721917_44	203275.BFO_3039	2.962e-42	170.0	COG2067@1|root,COG2067@2|Bacteria,4NEP1@976|Bacteroidetes,2FN33@200643|Bacteroidia,22W7P@171551|Porphyromonadaceae	976|Bacteroidetes	I	Psort location OuterMembrane, score	-	-	-	-	-	-	-	-	-	-	-	-	Toluene_X
BYD3_k127_4721917_10	1336243.JAEA01000014_gene3655	8.369e-146	469.0	COG2141@1|root,COG2141@2|Bacteria,1MUTJ@1224|Proteobacteria,2TTZI@28211|Alphaproteobacteria,1JU1Z@119045|Methylobacteriaceae	28211|Alphaproteobacteria	C	Luciferase-like monooxygenase	-	-	-	-	-	-	-	-	-	-	-	-	Bac_luciferase
BYD3_k127_4721917_30	1150600.ADIARSV_3181	3.966e-67	234.0	COG0664@1|root,COG0664@2|Bacteria,4NMCS@976|Bacteroidetes,1IRT5@117747|Sphingobacteriia	976|Bacteroidetes	T	COGs COG0664 cAMP-binding protein - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase	-	-	-	-	-	-	-	-	-	-	-	-	cNMP_binding
BYD3_k127_4721917_25	1123057.P872_08075	3.564e-82	277.0	COG2860@1|root,COG2860@2|Bacteria,4NEXS@976|Bacteroidetes,47KVV@768503|Cytophagia	976|Bacteroidetes	S	UPF0126 domain	-	-	-	-	-	-	-	-	-	-	-	-	UPF0126
BYD3_k127_4721917_39	153721.MYP_1402	4.056e-46	168.0	COG1917@1|root,COG1917@2|Bacteria,4NQ6V@976|Bacteroidetes	976|Bacteroidetes	S	Cupin 2, conserved barrel domain protein	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_4721917_24	485918.Cpin_5017	2.882e-84	283.0	COG0400@1|root,COG0400@2|Bacteria,4NF4I@976|Bacteroidetes,1IS39@117747|Sphingobacteriia	976|Bacteroidetes	S	PFAM phospholipase Carboxylesterase	-	-	-	ko:K06999	-	-	-	-	ko00000	-	-	-	Abhydrolase_2
BYD3_k127_4721917_50	1121897.AUGO01000006_gene566	3.577e-25	108.0	COG2388@1|root,COG2388@2|Bacteria,4NWXW@976|Bacteroidetes,1II9X@117743|Flavobacteriia,2NWWR@237|Flavobacterium	976|Bacteroidetes	S	GCN5-related N-acetyl-transferase	-	-	-	ko:K06975	-	-	-	-	ko00000	-	-	-	Acetyltransf_CG
BYD3_k127_4721917_11	1250278.JQNQ01000001_gene414	2.014e-135	437.0	COG0346@1|root,COG0346@2|Bacteria,4NGE0@976|Bacteroidetes,1I0JY@117743|Flavobacteriia	976|Bacteroidetes	E	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily	-	-	-	ko:K15975	-	-	-	-	ko00000	-	-	-	Glyoxalase
BYD3_k127_4721917_27	1406840.Q763_15165	4.762e-71	245.0	COG2353@1|root,COG2353@2|Bacteria,4NNMD@976|Bacteroidetes,1I18S@117743|Flavobacteriia,2NSUY@237|Flavobacterium	976|Bacteroidetes	S	Belongs to the UPF0312 family	-	-	-	-	-	-	-	-	-	-	-	-	YceI
BYD3_k127_4721917_3	926549.KI421517_gene2442	1.002e-200	629.0	COG0673@1|root,COG0673@2|Bacteria,4NE75@976|Bacteroidetes,47JGE@768503|Cytophagia	976|Bacteroidetes	S	Oxidoreductase domain protein	-	-	-	-	-	-	-	-	-	-	-	-	GFO_IDH_MocA,GFO_IDH_MocA_C
BYD3_k127_4721917_38	1237149.C900_03809	1.399e-46	171.0	COG0614@1|root,COG0614@2|Bacteria,4NQQ6@976|Bacteroidetes,47R7B@768503|Cytophagia	976|Bacteroidetes	P	PD-(D/E)XK nuclease superfamily	-	-	-	-	-	-	-	-	-	-	-	-	PDDEXK_3
BYD3_k127_4721917_6	1185876.BN8_06488	8.189e-183	578.0	COG0673@1|root,COG0673@2|Bacteria,4NENY@976|Bacteroidetes	976|Bacteroidetes	S	Oxidoreductase family, NAD-binding Rossmann fold	-	-	-	-	-	-	-	-	-	-	-	-	GFO_IDH_MocA
BYD3_k127_4721917_9	1237149.C900_05201	8.434e-147	476.0	COG1524@1|root,COG1524@2|Bacteria,4NFRQ@976|Bacteroidetes,47JI2@768503|Cytophagia	976|Bacteroidetes	S	PFAM type I phosphodiesterase nucleotide pyrophosphatase	-	-	-	-	-	-	-	-	-	-	-	-	Phosphodiest
BYD3_k127_4721917_28	1286632.P278_10570	1.546e-69	245.0	2A5V5@1|root,30UKY@2|Bacteria,4NPBN@976|Bacteroidetes,1I2Q6@117743|Flavobacteriia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_4721917_8	1392488.JHZY01000002_gene1270	2.145e-167	539.0	COG0521@1|root,COG0521@2|Bacteria,4PKID@976|Bacteroidetes,1IJFB@117743|Flavobacteriia,2XJW7@283735|Leeuwenhoekiella	976|Bacteroidetes	H	Starch-binding associating with outer membrane	-	-	-	-	-	-	-	-	-	-	-	-	SusD-like_2
BYD3_k127_4721917_7	1286632.P278_10550	1.769e-171	548.0	COG4206@1|root,COG4206@2|Bacteria,4NZWU@976|Bacteroidetes,1I86Y@117743|Flavobacteriia	976|Bacteroidetes	H	TonB-linked outer membrane protein, SusC RagA family	-	-	-	-	-	-	-	-	-	-	-	-	CarbopepD_reg_2,Plug,STN,TonB_dep_Rec
BYD3_k127_4736594_38	471854.Dfer_5739	7.093e-118	398.0	COG0179@1|root,COG0179@2|Bacteria,4NFMZ@976|Bacteroidetes,47N4F@768503|Cytophagia	976|Bacteroidetes	Q	PFAM fumarylacetoacetate (FAA) hydrolase	-	-	-	-	-	-	-	-	-	-	-	-	FAA_hydrolase
BYD3_k127_4736594_24	1123057.P872_16700	3.151e-149	483.0	COG0667@1|root,COG0667@2|Bacteria,4NEB0@976|Bacteroidetes,47JBA@768503|Cytophagia	976|Bacteroidetes	C	PFAM aldo keto reductase	-	-	-	-	-	-	-	-	-	-	-	-	Aldo_ket_red,TAT_signal
BYD3_k127_4736594_59	1121904.ARBP01000053_gene472	1.558e-78	264.0	COG2207@1|root,COG2207@2|Bacteria,4NEHD@976|Bacteroidetes,47KBW@768503|Cytophagia	976|Bacteroidetes	K	Transcriptional regulator, AraC family	-	-	-	-	-	-	-	-	-	-	-	-	HTH_18
BYD3_k127_4736594_73	700598.Niako_4637	7.316e-63	229.0	2CYFR@1|root,32T44@2|Bacteria,4P6IN@976|Bacteroidetes,1IZDY@117747|Sphingobacteriia	976|Bacteroidetes	S	Protein of unknown function (DUF998)	-	-	-	-	-	-	-	-	-	-	-	-	DUF998
BYD3_k127_4736594_27	1123248.KB893328_gene933	3.665e-141	461.0	COG0657@1|root,COG0657@2|Bacteria,4NIQ0@976|Bacteroidetes	976|Bacteroidetes	I	esterase	-	-	-	-	-	-	-	-	-	-	-	-	Abhydrolase_3,Peptidase_S9
BYD3_k127_4736594_91	1408473.JHXO01000012_gene298	4.229e-45	168.0	2DX1N@1|root,32V2J@2|Bacteria,4NT61@976|Bacteroidetes,2FTUX@200643|Bacteroidia	976|Bacteroidetes	S	Protein of unknown function (DUF3788)	-	-	-	-	-	-	-	-	-	-	-	-	DUF3788
BYD3_k127_4736594_37	666686.B1NLA3E_08530	1.661e-118	389.0	2C1EG@1|root,2Z7MZ@2|Bacteria,1V7SD@1239|Firmicutes,4HSP4@91061|Bacilli	91061|Bacilli	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_4736594_9	700598.Niako_4920	1.633e-219	692.0	COG0025@1|root,COG0025@2|Bacteria,4NFHG@976|Bacteroidetes,1IQTM@117747|Sphingobacteriia	976|Bacteroidetes	P	Na H antiporter	-	-	-	ko:K03316	-	-	-	-	ko00000	2.A.36	-	-	Na_H_Exchanger
BYD3_k127_4736594_35	641524.ADICYQ_4391	3.144e-122	396.0	COG0500@1|root,COG2226@2|Bacteria,4NJR0@976|Bacteroidetes,47PVG@768503|Cytophagia	976|Bacteroidetes	Q	Nodulation protein S (NodS)	-	-	-	-	-	-	-	-	-	-	-	-	Methyltransf_31
BYD3_k127_4736594_96	1040986.ATYO01000039_gene4526	1.149e-40	156.0	2FBK1@1|root,343R7@2|Bacteria,1NY88@1224|Proteobacteria,2UTP6@28211|Alphaproteobacteria	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_4736594_124	452637.Oter_3066	1.197e-05	58.0	COG2911@1|root,COG3209@1|root,COG2911@2|Bacteria,COG3209@2|Bacteria	2|Bacteria	M	self proteolysis	-	-	-	ko:K21449	-	-	-	-	ko00000,ko02000	1.B.40.2	-	-	DctA-YdbH
BYD3_k127_4736594_82	545695.TREAZ_1104	4.332e-56	215.0	COG5563@1|root,COG5563@2|Bacteria	2|Bacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	Big_2
BYD3_k127_4736594_14	1123248.KB893338_gene2308	1.732e-198	646.0	COG0577@1|root,COG0577@2|Bacteria,4NDUK@976|Bacteroidetes,1IPB0@117747|Sphingobacteriia	976|Bacteroidetes	V	ABC-type antimicrobial peptide transport system, permease component	-	-	-	ko:K02004	-	M00258	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	FtsX,MacB_PCD
BYD3_k127_4736594_85	700598.Niako_7091	4.887e-50	184.0	COG1309@1|root,COG1309@2|Bacteria,4NN5H@976|Bacteroidetes	976|Bacteroidetes	K	tetR family	-	-	-	ko:K16137	-	-	-	-	ko00000,ko03000	-	-	-	TetR_C_13,TetR_N
BYD3_k127_4736594_66	504472.Slin_6223	8.565e-70	241.0	COG2128@1|root,COG2128@2|Bacteria,4NH2M@976|Bacteroidetes,47PX1@768503|Cytophagia	976|Bacteroidetes	S	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity	-	-	-	-	-	-	-	-	-	-	-	-	CMD
BYD3_k127_4736594_44	313596.RB2501_14179	7.01e-100	351.0	COG2203@1|root,COG3604@1|root,COG5000@1|root,COG2203@2|Bacteria,COG3604@2|Bacteria,COG5000@2|Bacteria,4PMAT@976|Bacteroidetes,1IJPS@117743|Flavobacteriia	976|Bacteroidetes	KT	Sigma-54 interaction domain	-	-	-	ko:K02584	ko02020,map02020	-	-	-	ko00000,ko00001,ko03000	-	-	-	GAF,GAF_2,GAF_3,HTH_8,PAS_9,Response_reg,Sigma54_activat
BYD3_k127_4736594_21	1202532.FF52_04270	1.686e-155	499.0	28IAE@1|root,2Z8D0@2|Bacteria,4NFWC@976|Bacteroidetes,1I0D2@117743|Flavobacteriia,2NTN6@237|Flavobacterium	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_4736594_83	926556.Echvi_2579	7.586e-55	199.0	COG3047@1|root,COG3047@2|Bacteria	2|Bacteria	-	-	-	-	-	ko:K07275	-	-	-	-	ko00000	-	-	-	OMP_b-brl,OmpW
BYD3_k127_4736594_10	1121373.KB903664_gene2651	1.786e-217	695.0	COG3087@1|root,COG3087@2|Bacteria,4PNV5@976|Bacteroidetes	976|Bacteroidetes	D	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_4736594_75	929556.Solca_2785	1.166e-61	218.0	2C7HJ@1|root,31BFZ@2|Bacteria,4NRGQ@976|Bacteroidetes,1IXYY@117747|Sphingobacteriia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	OMP_b-brl
BYD3_k127_4736594_101	1121912.AUHD01000006_gene1464	1.361e-32	133.0	2C852@1|root,32YB2@2|Bacteria,4NM63@976|Bacteroidetes,1I1C4@117743|Flavobacteriia	976|Bacteroidetes	S	Domain of unknown function (DUF4136)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4136
BYD3_k127_4736594_122	1123277.KB893239_gene1261	3.02e-06	52.0	COG5297@1|root,COG5297@2|Bacteria,4NG19@976|Bacteroidetes,47TTP@768503|Cytophagia	976|Bacteroidetes	G	Protein of unknown function (DUF1593)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1593
BYD3_k127_4736594_64	153721.MYP_2685	9.293e-72	249.0	COG3832@1|root,COG3832@2|Bacteria,4NNTR@976|Bacteroidetes,47X4F@768503|Cytophagia	976|Bacteroidetes	S	Pfam Activator of Hsp90 ATPase	-	-	-	-	-	-	-	-	-	-	-	-	AHSA1
BYD3_k127_4736594_78	760192.Halhy_4086	5.957e-60	211.0	COG3832@1|root,COG3832@2|Bacteria,4NRGI@976|Bacteroidetes,1ITIV@117747|Sphingobacteriia	976|Bacteroidetes	S	PFAM Activator of Hsp90 ATPase homolog 1-like protein	-	-	-	-	-	-	-	-	-	-	-	-	AHSA1
BYD3_k127_4736594_112	1410674.JNKU01000008_gene1270	2.378e-14	83.0	COG0484@1|root,COG0484@2|Bacteria,1TP00@1239|Firmicutes,4H9KA@91061|Bacilli,3F490@33958|Lactobacillaceae	91061|Bacilli	O	ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins	dnaJ	-	-	ko:K03686	-	-	-	-	ko00000,ko03029,ko03110	-	-	-	DnaJ,DnaJ_C,DnaJ_CXXCXGXG
BYD3_k127_4736594_50	760192.Halhy_5684	1.112e-92	307.0	COG2207@1|root,COG2207@2|Bacteria,4NM5G@976|Bacteroidetes,1ISDK@117747|Sphingobacteriia	976|Bacteroidetes	K	PFAM Bacterial regulatory helix-turn-helix proteins, AraC family	-	-	-	-	-	-	-	-	-	-	-	-	HTH_18
BYD3_k127_4736594_89	1121899.Q764_12145	4.335e-47	172.0	COG1917@1|root,COG1917@2|Bacteria,4PA9I@976|Bacteroidetes,1IE47@117743|Flavobacteriia,2NZU1@237|Flavobacterium	976|Bacteroidetes	S	Cupin 2, conserved barrel domain protein	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_4736594_109	1218108.KB908298_gene3541	3.875e-16	80.0	2ENFE@1|root,33G2U@2|Bacteria,4NYZ4@976|Bacteroidetes,1I6C9@117743|Flavobacteriia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_4736594_63	1123276.KB893248_gene54	3.22e-73	259.0	COG0628@1|root,COG0628@2|Bacteria,4NFHZ@976|Bacteroidetes,47KDN@768503|Cytophagia	976|Bacteroidetes	S	AI-2E family transporter	-	-	-	-	-	-	-	-	-	-	-	-	AI-2E_transport
BYD3_k127_4736594_90	485917.Phep_1702	5.433e-46	183.0	COG1793@1|root,COG3285@1|root,COG1793@2|Bacteria,COG3285@2|Bacteria,4NESR@976|Bacteroidetes,1IVYH@117747|Sphingobacteriia	976|Bacteroidetes	L	DNA polymerase Ligase (LigD)	-	-	6.5.1.1	ko:K01971	ko03450,map03450	-	R00381	RC00005	ko00000,ko00001,ko01000,ko03400	-	-	-	DNA_ligase_A_C,DNA_ligase_A_M,LigD_N
BYD3_k127_4736594_93	1089547.KB913013_gene4434	4.195e-44	172.0	COG0457@1|root,COG0457@2|Bacteria,4P246@976|Bacteroidetes,47PGN@768503|Cytophagia	976|Bacteroidetes	S	Protein of unknown function (DUF2911)	-	-	-	-	-	-	-	-	-	-	-	-	DUF2911
BYD3_k127_4736594_120	1189619.pgond44_14503	5.049e-08	61.0	COG4219@1|root,COG4219@2|Bacteria,4PNPA@976|Bacteroidetes,1IKA3@117743|Flavobacteriia	976|Bacteroidetes	KT	Gram-negative bacterial TonB protein C-terminal	-	-	-	-	-	-	-	-	-	-	-	-	TonB_C
BYD3_k127_4736594_113	1124780.ANNU01000002_gene1469	1.029e-10	76.0	COG1361@1|root,COG2706@1|root,COG1361@2|Bacteria,COG2706@2|Bacteria,4PPMM@976|Bacteroidetes	976|Bacteroidetes	M	C-terminal domain of CHU protein family	-	-	-	-	-	-	-	-	-	-	-	-	CHU_C
BYD3_k127_4736594_106	1353529.M899_1446	2e-22	115.0	COG2304@1|root,COG3055@1|root,COG3203@1|root,COG4733@1|root,COG2304@2|Bacteria,COG3055@2|Bacteria,COG3203@2|Bacteria,COG4733@2|Bacteria,1PDQV@1224|Proteobacteria,43CYI@68525|delta/epsilon subdivisions,2X86P@28221|Deltaproteobacteria	28221|Deltaproteobacteria	M	SMART Integrin alpha beta-propellor repeat protein	-	-	-	-	-	-	-	-	-	-	-	-	FG-GAP_2
BYD3_k127_4736594_107	7029.ACYPI003499-PA	2.392e-21	109.0	COG4886@1|root,KOG0617@2759|Eukaryota,38EQ6@33154|Opisthokonta,3BDU4@33208|Metazoa,3CTI1@33213|Bilateria,41TEG@6656|Arthropoda,3SH3T@50557|Insecta,3E9V9@33342|Paraneoptera	33208|Metazoa	T	Leucine-rich repeats, typical (most populated) subfamily	RSU1	GO:0001932,GO:0001933,GO:0002009,GO:0002165,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005912,GO:0005924,GO:0005925,GO:0006469,GO:0007154,GO:0007165,GO:0007166,GO:0007229,GO:0007264,GO:0007265,GO:0007275,GO:0007444,GO:0007472,GO:0007475,GO:0007476,GO:0007552,GO:0007560,GO:0008150,GO:0008284,GO:0008587,GO:0009653,GO:0009791,GO:0009886,GO:0009887,GO:0009888,GO:0009892,GO:0009966,GO:0009968,GO:0009987,GO:0010563,GO:0010605,GO:0010646,GO:0010648,GO:0010810,GO:0010811,GO:0019220,GO:0019222,GO:0023051,GO:0023052,GO:0023057,GO:0030054,GO:0030055,GO:0030155,GO:0031323,GO:0031324,GO:0031399,GO:0031400,GO:0032268,GO:0032269,GO:0032501,GO:0032502,GO:0032872,GO:0032873,GO:0033673,GO:0035107,GO:0035114,GO:0035120,GO:0035220,GO:0035239,GO:0035295,GO:0035556,GO:0042127,GO:0042325,GO:0042326,GO:0043085,GO:0043086,GO:0043087,GO:0043405,GO:0043407,GO:0043408,GO:0043409,GO:0043506,GO:0043508,GO:0043547,GO:0043549,GO:0044092,GO:0044093,GO:0044424,GO:0044444,GO:0044464,GO:0045785,GO:0045859,GO:0045936,GO:0046328,GO:0046329,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048563,GO:0048569,GO:0048583,GO:0048585,GO:0048707,GO:0048729,GO:0048731,GO:0048736,GO:0048737,GO:0048856,GO:0050789,GO:0050790,GO:0050794,GO:0050896,GO:0051171,GO:0051172,GO:0051174,GO:0051246,GO:0051248,GO:0051336,GO:0051338,GO:0051345,GO:0051348,GO:0051716,GO:0060255,GO:0060429,GO:0060562,GO:0065007,GO:0065009,GO:0070161,GO:0070302,GO:0070303,GO:0071900,GO:0071901,GO:0080090,GO:0080134,GO:0080135,GO:1902531,GO:1902532,GO:2000177,GO:2000179	-	-	-	-	-	-	-	-	-	-	LRR_8
BYD3_k127_4736594_104	760192.Halhy_3237	1.454e-26	125.0	COG0810@1|root,COG4219@1|root,COG0810@2|Bacteria,COG4219@2|Bacteria,4NDWS@976|Bacteroidetes,1IRNZ@117747|Sphingobacteriia	976|Bacteroidetes	KMT	BlaR1 peptidase M56	-	-	-	-	-	-	-	-	-	-	-	-	CarbopepD_reg_2,Peptidase_M56,Plug,TonB_C
BYD3_k127_4736594_128	269798.CHU_3203	0.0002425	44.0	COG1943@1|root,COG1943@2|Bacteria,4NQR4@976|Bacteroidetes,47QSX@768503|Cytophagia	976|Bacteroidetes	L	Transposase IS200 like	-	-	-	-	-	-	-	-	-	-	-	-	Y1_Tnp
BYD3_k127_4736594_98	1121286.AUMT01000024_gene3422	1.985e-40	162.0	COG3055@1|root,COG3055@2|Bacteria,4NG50@976|Bacteroidetes,1HY2Q@117743|Flavobacteriia,3ZT53@59732|Chryseobacterium	976|Bacteroidetes	S	Galactose oxidase, central domain	nanM	-	-	-	-	-	-	-	-	-	-	-	Kelch_1,Kelch_3,Kelch_4,Kelch_6
BYD3_k127_4736594_26	509635.N824_00860	3.111e-144	466.0	COG2114@1|root,COG2114@2|Bacteria,4NKWT@976|Bacteroidetes,1IV7B@117747|Sphingobacteriia	976|Bacteroidetes	T	Protein of unknown function (DUF2652)	-	-	-	-	-	-	-	-	-	-	-	-	DUF2652
BYD3_k127_4736594_94	1237149.C900_01308	1.797e-41	155.0	COG1695@1|root,COG1695@2|Bacteria	2|Bacteria	K	negative regulation of transcription, DNA-templated	-	-	-	-	-	-	-	-	-	-	-	-	PadR
BYD3_k127_4736594_0	1123057.P872_15730	0.0	1103.0	COG0577@1|root,COG0577@2|Bacteria,4NDUK@976|Bacteroidetes,47JJN@768503|Cytophagia	976|Bacteroidetes	V	FtsX-like permease family	-	-	-	ko:K02004	-	M00258	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	FtsX,MacB_PCD
BYD3_k127_4736594_86	1123278.KB893427_gene1234	2.651e-49	185.0	2EZJ3@1|root,33SQ9@2|Bacteria,4P1YA@976|Bacteroidetes,47TJ1@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_4736594_95	224325.AF_1476	2.455e-41	156.0	COG0346@1|root,arCOG02706@2157|Archaea,2Y0N9@28890|Euryarchaeota	28890|Euryarchaeota	E	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily	-	-	-	-	-	-	-	-	-	-	-	-	Glyoxalase
BYD3_k127_4736594_76	497964.CfE428DRAFT_3517	3.555e-61	222.0	COG0329@1|root,COG0329@2|Bacteria,46UHJ@74201|Verrucomicrobia	74201|Verrucomicrobia	EM	Dihydrodipicolinate synthetase family	-	-	4.1.3.3	ko:K01639	ko00520,map00520	-	R01811	RC00159,RC00600	ko00000,ko00001,ko01000	-	-	-	DHDPS
BYD3_k127_4736594_81	484018.BACPLE_02844	1.133e-56	209.0	2DMDD@1|root,32PHX@2|Bacteria,4P3AJ@976|Bacteroidetes,2FQEJ@200643|Bacteroidia,4APHQ@815|Bacteroidaceae	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_4736594_22	1120965.AUBV01000007_gene2631	1.606e-154	496.0	COG4299@1|root,COG4299@2|Bacteria,4NGKU@976|Bacteroidetes,47M78@768503|Cytophagia	976|Bacteroidetes	S	Domain of unknown function (DUF5009)	-	-	-	-	-	-	-	-	-	-	-	-	DUF5009
BYD3_k127_4736594_34	1123248.KB893327_gene789	2.529e-123	400.0	2957S@1|root,2ZSK8@2|Bacteria	2|Bacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_4736594_15	1122605.KB893631_gene3957	7.864e-195	634.0	COG0577@1|root,COG0577@2|Bacteria,4NDUK@976|Bacteroidetes,1IRGG@117747|Sphingobacteriia	976|Bacteroidetes	V	MacB-like periplasmic core domain	-	-	-	-	-	-	-	-	-	-	-	-	FtsX,MacB_PCD
BYD3_k127_4736594_47	1385935.N836_19965	1.079e-95	323.0	COG0604@1|root,COG0604@2|Bacteria,1G0N4@1117|Cyanobacteria,1H9U9@1150|Oscillatoriales	1117|Cyanobacteria	C	NADPH quinone reductase	-	-	-	-	-	-	-	-	-	-	-	-	ADH_N,ADH_zinc_N_2
BYD3_k127_4736594_7	468059.AUHA01000005_gene2446	6.395e-239	745.0	COG0491@1|root,COG0607@1|root,COG0491@2|Bacteria,COG0607@2|Bacteria,4NE2Y@976|Bacteroidetes,1IUW3@117747|Sphingobacteriia	976|Bacteroidetes	P	Rhodanese Homology Domain	-	-	3.1.2.6	ko:K01069	ko00620,map00620	-	R01736	RC00004,RC00137	ko00000,ko00001,ko01000	-	-	-	Lactamase_B,Rhodanese
BYD3_k127_4736594_102	1288963.ADIS_3395	1.885e-29	120.0	COG0607@1|root,COG0607@2|Bacteria,4NUPH@976|Bacteroidetes,47RS4@768503|Cytophagia	976|Bacteroidetes	P	Rhodanese Homology Domain	-	-	-	-	-	-	-	-	-	-	-	-	Rhodanese
BYD3_k127_4736594_80	1237149.C900_04499	5.596e-57	204.0	COG1280@1|root,COG1280@2|Bacteria,4NUV7@976|Bacteroidetes,47SDU@768503|Cytophagia	976|Bacteroidetes	E	LysE type translocator	-	-	-	-	-	-	-	-	-	-	-	-	LysE
BYD3_k127_4736594_51	938709.AUSH02000031_gene1321	9.961e-90	302.0	COG0730@1|root,COG0730@2|Bacteria,4NFWP@976|Bacteroidetes	976|Bacteroidetes	S	membrane transporter protein	-	-	-	ko:K07090	-	-	-	-	ko00000	-	-	-	TauE
BYD3_k127_4736594_71	755732.Fluta_2871	2.379e-64	226.0	COG0664@1|root,COG0664@2|Bacteria,4NFIS@976|Bacteroidetes,1HXJ2@117743|Flavobacteriia	976|Bacteroidetes	K	CRP FNR family transcriptional regulator	-	-	-	ko:K01420	-	-	-	-	ko00000,ko03000	-	-	-	HTH_Crp_2,cNMP_binding
BYD3_k127_4736594_111	1034807.FBFL15_1141	1.142e-15	80.0	COG2149@1|root,COG2149@2|Bacteria,4NW0X@976|Bacteroidetes,1ID2S@117743|Flavobacteriia,2NX2P@237|Flavobacterium	976|Bacteroidetes	S	Domain of unknown function (DUF202)	-	-	-	ko:K00389	-	-	-	-	ko00000	-	-	-	DUF202
BYD3_k127_4736594_1	1123277.KB893186_gene5455	2.814e-304	959.0	COG2133@1|root,COG3291@1|root,COG4654@1|root,COG2133@2|Bacteria,COG3291@2|Bacteria,COG4654@2|Bacteria,4NKBN@976|Bacteroidetes,47JFX@768503|Cytophagia	976|Bacteroidetes	C	Glucose / Sorbosone dehydrogenase	-	-	-	ko:K08738	ko00920,ko01100,ko01120,ko01524,ko02020,ko04115,ko04210,ko04214,ko04215,ko04932,ko05010,ko05012,ko05014,ko05016,ko05134,ko05145,ko05152,ko05161,ko05164,ko05167,ko05168,ko05200,ko05210,ko05222,ko05416,map00920,map01100,map01120,map01524,map02020,map04115,map04210,map04214,map04215,map04932,map05010,map05012,map05014,map05016,map05134,map05145,map05152,map05161,map05164,map05167,map05168,map05200,map05210,map05222,map05416	M00595	R10151	RC03151,RC03152	ko00000,ko00001,ko00002	3.D.4.6	-	-	CBM_6,Cytochrom_C,GSDH,PKD
BYD3_k127_4736594_48	1123276.KB893245_gene1498	1.668e-95	320.0	COG1262@1|root,COG1262@2|Bacteria,4NEUZ@976|Bacteroidetes	976|Bacteroidetes	KLT	PFAM Formylglycine-generating sulfatase enzyme	-	-	-	-	-	-	-	-	-	-	-	-	BNR_2,Big_2,FGE-sulfatase
BYD3_k127_4736594_45	1123278.KB893622_gene2701	1.405e-98	326.0	COG3828@1|root,COG3828@2|Bacteria,4P588@976|Bacteroidetes	976|Bacteroidetes	S	Domain of Unknown Function (DUF1080)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1080
BYD3_k127_4736594_121	226186.BT_3482	1.339e-07	60.0	COG3391@1|root,COG3391@2|Bacteria,4NFK2@976|Bacteroidetes,2FQ7Z@200643|Bacteroidia,4AP65@815|Bacteroidaceae	2|Bacteria	S	IPT TIG domain protein	-	-	-	-	-	-	-	-	-	-	-	-	NHL,SLH,TIG
BYD3_k127_4736594_62	700598.Niako_1733	2.317e-75	259.0	COG2197@1|root,COG2197@2|Bacteria,4NN4D@976|Bacteroidetes	976|Bacteroidetes	T	COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain	-	-	-	-	-	-	-	-	-	-	-	-	GerE,Response_reg
BYD3_k127_4736594_8	1267211.KI669560_gene463	2.281e-221	698.0	COG0657@1|root,COG4099@1|root,COG0657@2|Bacteria,COG4099@2|Bacteria,4PKKH@976|Bacteroidetes,1J0WF@117747|Sphingobacteriia	976|Bacteroidetes	I	alpha/beta hydrolase fold	-	-	-	ko:K07214	-	-	-	-	ko00000	-	-	-	Abhydrolase_3,DLH
BYD3_k127_4736594_29	743722.Sph21_0906	3.703e-137	441.0	COG0596@1|root,COG0596@2|Bacteria,4NFBJ@976|Bacteroidetes	976|Bacteroidetes	S	Alpha beta hydrolase	-	-	-	-	-	-	-	-	-	-	-	-	Abhydrolase_1
BYD3_k127_4736594_19	1121904.ARBP01000004_gene1059	6.845e-162	538.0	COG0577@1|root,COG0577@2|Bacteria,4NDUK@976|Bacteroidetes,47NTJ@768503|Cytophagia	976|Bacteroidetes	V	MacB-like periplasmic core domain	-	-	-	ko:K02004	-	M00258	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	FtsX,MacB_PCD
BYD3_k127_4736594_32	1123248.KB893327_gene788	2.376e-127	413.0	COG0258@1|root,COG0258@2|Bacteria	2|Bacteria	L	nuclease activity	polA	GO:0003674,GO:0003676,GO:0003677,GO:0003824,GO:0003887,GO:0004518,GO:0004527,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006281,GO:0006284,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008408,GO:0008409,GO:0009058,GO:0009059,GO:0009987,GO:0016740,GO:0016772,GO:0016779,GO:0016787,GO:0016788,GO:0018130,GO:0019438,GO:0033554,GO:0034061,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0071897,GO:0090304,GO:0090305,GO:0097159,GO:0140097,GO:1901360,GO:1901362,GO:1901363,GO:1901576	2.7.7.7	ko:K02335	ko00230,ko00240,ko01100,ko03030,ko03410,ko03420,ko03440,map00230,map00240,map01100,map03030,map03410,map03420,map03440	-	R00375,R00376,R00377,R00378	RC02795	ko00000,ko00001,ko01000,ko03032,ko03400	-	-	-	5_3_exonuc,5_3_exonuc_N,DNA_pol_A,DNA_pol_A_exo1
BYD3_k127_4736594_99	376686.Fjoh_4305	6.05e-35	137.0	COG2259@1|root,31TV8@2|Bacteria,4NQJ7@976|Bacteroidetes,1I6FE@117743|Flavobacteriia,2NWFZ@237|Flavobacterium	976|Bacteroidetes	S	DoxX-like family	-	-	-	-	-	-	-	-	-	-	-	-	DoxX_2
BYD3_k127_4736594_61	349521.HCH_03204	1.062e-76	260.0	COG3832@1|root,COG3832@2|Bacteria,1REFR@1224|Proteobacteria	1224|Proteobacteria	S	Activator of Hsp90 ATPase homolog 1-like protein	-	-	-	-	-	-	-	-	-	-	-	-	AHSA1
BYD3_k127_4736594_126	616991.JPOO01000003_gene282	0.0001028	45.0	COG0640@1|root,COG0640@2|Bacteria,4NQCU@976|Bacteroidetes,1I3US@117743|Flavobacteriia	976|Bacteroidetes	K	Bacterial regulatory protein, arsR family	-	-	-	-	-	-	-	-	-	-	-	-	HTH_20,HTH_5
BYD3_k127_4736594_87	616991.JPOO01000003_gene282	5.428e-48	173.0	COG0640@1|root,COG0640@2|Bacteria,4NQCU@976|Bacteroidetes,1I3US@117743|Flavobacteriia	976|Bacteroidetes	K	Bacterial regulatory protein, arsR family	-	-	-	-	-	-	-	-	-	-	-	-	HTH_20,HTH_5
BYD3_k127_4736594_33	1237149.C900_04236	5.358e-127	411.0	COG0568@1|root,COG0568@2|Bacteria,4NEBF@976|Bacteroidetes,47JZ7@768503|Cytophagia	976|Bacteroidetes	K	Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released	rpoD	-	-	ko:K03086	-	-	-	-	ko00000,ko03021	-	-	-	Sigma70_r1_2,Sigma70_r2,Sigma70_r3,Sigma70_r4
BYD3_k127_4736594_2	1120968.AUBX01000010_gene919	1.317e-266	848.0	COG0577@1|root,COG0577@2|Bacteria,4NDUK@976|Bacteroidetes,47JJN@768503|Cytophagia	976|Bacteroidetes	V	FtsX-like permease family	-	-	-	ko:K02004	-	M00258	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	FtsX,MacB_PCD
BYD3_k127_4736594_97	1237149.C900_04653	1.185e-40	152.0	COG1695@1|root,COG1695@2|Bacteria,4NQBA@976|Bacteroidetes	976|Bacteroidetes	K	transcriptional regulator	-	-	-	-	-	-	-	-	-	-	-	-	PadR
BYD3_k127_4736594_3	880073.Calab_0998	1.88e-258	811.0	COG1506@1|root,COG1506@2|Bacteria,2NQR2@2323|unclassified Bacteria	2|Bacteria	E	Alpha/beta hydrolase family	ptpA	-	-	-	-	-	-	-	-	-	-	-	Peptidase_S9
BYD3_k127_4736594_4	880073.Calab_0998	2.806e-250	786.0	COG1506@1|root,COG1506@2|Bacteria,2NQR2@2323|unclassified Bacteria	2|Bacteria	E	Alpha/beta hydrolase family	ptpA	-	-	-	-	-	-	-	-	-	-	-	Peptidase_S9
BYD3_k127_4736594_100	1279009.ADICEAN_00035	1.495e-33	136.0	COG2133@1|root,COG2133@2|Bacteria	2|Bacteria	G	pyrroloquinoline quinone binding	-	-	-	-	-	-	-	-	-	-	-	-	CHRD,Malectin
BYD3_k127_4736594_40	1379698.RBG1_1C00001G1070	8.521e-111	362.0	COG2085@1|root,COG2085@2|Bacteria	2|Bacteria	S	NADP oxidoreductase coenzyme F420-dependent	-	-	1.5.1.40	ko:K06988	-	-	-	-	ko00000,ko01000	-	-	-	F420_oxidored
BYD3_k127_4736594_31	1122179.KB890440_gene1026	1.144e-127	416.0	COG3781@1|root,COG3781@2|Bacteria,4NGJ0@976|Bacteroidetes,1IVFH@117747|Sphingobacteriia	976|Bacteroidetes	S	Bestrophin, RFP-TM, chloride channel	-	-	-	ko:K08994	-	-	-	-	ko00000,ko02000	1.A.46.2	-	-	Bestrophin
BYD3_k127_4736594_23	1237149.C900_01475	1.365e-152	503.0	COG0642@1|root,COG2205@2|Bacteria,4NN26@976|Bacteroidetes	976|Bacteroidetes	T	7TM diverse intracellular signalling	-	-	-	-	-	-	-	-	-	-	-	-	7TMR-DISM_7TM,HATPase_c,HisKA
BYD3_k127_4736594_30	1122223.KB890696_gene75	4.009e-133	433.0	COG4638@1|root,COG4638@2|Bacteria	2|Bacteria	P	Rieske (2fe-2S)	-	-	1.14.15.7	ko:K00499	ko00260,map00260	-	R07409	RC00087	ko00000,ko00001,ko01000	-	-	-	Rieske,Ring_hydroxyl_A
BYD3_k127_4736594_20	925409.KI911562_gene1119	6.714e-160	518.0	COG0531@1|root,COG0531@2|Bacteria,4NJPZ@976|Bacteroidetes,1IRQU@117747|Sphingobacteriia	976|Bacteroidetes	E	Amino acid permease	-	-	-	ko:K03294	-	-	-	-	ko00000	2.A.3.2	-	-	AA_permease_2
BYD3_k127_4736594_41	1121904.ARBP01000004_gene1059	1.261e-109	384.0	COG0577@1|root,COG0577@2|Bacteria,4NDUK@976|Bacteroidetes,47NTJ@768503|Cytophagia	976|Bacteroidetes	V	MacB-like periplasmic core domain	-	-	-	ko:K02004	-	M00258	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	FtsX,MacB_PCD
BYD3_k127_4736594_25	1122605.KB893626_gene2600	2.463e-148	473.0	COG2227@1|root,COG2227@2|Bacteria	2|Bacteria	H	3-demethylubiquinone-9 3-O-methyltransferase activity	-	-	-	-	-	-	-	-	-	-	-	-	Methyltransf_11,Methyltransf_23,Methyltransf_25
BYD3_k127_4736594_70	865937.Gilli_0793	8.971e-66	244.0	COG1228@1|root,COG1228@2|Bacteria,4NEV0@976|Bacteroidetes,1IH9T@117743|Flavobacteriia,2P7KS@244698|Gillisia	976|Bacteroidetes	Q	Amidohydrolase family	-	-	-	-	-	-	-	-	-	-	-	-	Amidohydro_1
BYD3_k127_4736594_84	1237149.C900_04106	1.371e-52	187.0	COG0640@1|root,COG0640@2|Bacteria,4NQ33@976|Bacteroidetes,47QAK@768503|Cytophagia	976|Bacteroidetes	K	helix_turn_helix, Arsenical Resistance Operon Repressor	-	-	-	-	-	-	-	-	-	-	-	-	HTH_20,HTH_5
BYD3_k127_4736594_60	760192.Halhy_4088	1.137e-77	261.0	COG3832@1|root,COG3832@2|Bacteria,4NM7P@976|Bacteroidetes,1ISPW@117747|Sphingobacteriia	976|Bacteroidetes	S	PFAM Activator of Hsp90 ATPase	-	-	-	-	-	-	-	-	-	-	-	-	AHSA1
BYD3_k127_4736594_77	991.IW20_21560	3.655e-60	209.0	COG2259@1|root,31BQE@2|Bacteria,4NQH2@976|Bacteroidetes,1I2VX@117743|Flavobacteriia,2NWSB@237|Flavobacterium	976|Bacteroidetes	S	DoxX-like family	-	-	-	-	-	-	-	-	-	-	-	-	DoxX_2
BYD3_k127_4736594_56	926562.Oweho_2478	2.243e-81	276.0	COG4430@1|root,COG4430@2|Bacteria,4NG4C@976|Bacteroidetes,1HXYY@117743|Flavobacteriia,2PAUZ@246874|Cryomorphaceae	976|Bacteroidetes	S	Bacteriocin-protection, YdeI or OmpD-Associated	-	-	-	-	-	-	-	-	-	-	-	-	DUF1801,OmdA
BYD3_k127_4736594_49	743719.PaelaDRAFT_3761	4.316e-93	308.0	28H95@1|root,2Z7KY@2|Bacteria,1TQTR@1239|Firmicutes,4HB82@91061|Bacilli,26UCG@186822|Paenibacillaceae	91061|Bacilli	S	Protein of unknown function (DUF4256)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4256
BYD3_k127_4736594_117	471854.Dfer_0761	9.192e-09	57.0	COG1520@1|root,COG1520@2|Bacteria	2|Bacteria	S	amino acid activation for nonribosomal peptide biosynthetic process	-	-	-	-	-	-	-	-	-	-	-	-	PQQ_2,PQQ_3
BYD3_k127_4736594_127	929713.NIASO_19920	0.0001351	46.0	COG3509@1|root,COG3509@2|Bacteria,4NHFS@976|Bacteroidetes,1ITGP@117747|Sphingobacteriia	976|Bacteroidetes	Q	Esterase PHB depolymerase	-	-	-	ko:K03932	-	-	-	-	ko00000	-	CE1	-	Abhydrolase_2,Esterase_phd
BYD3_k127_4736594_67	1198114.AciX9_0562	1.027e-67	232.0	COG1917@1|root,COG1917@2|Bacteria,3Y4HX@57723|Acidobacteria,2JJ92@204432|Acidobacteriia	204432|Acidobacteriia	S	PFAM Cupin 2, conserved barrel	-	-	-	-	-	-	-	-	-	-	-	-	Cupin_2
BYD3_k127_4736594_55	760192.Halhy_3635	8.897e-83	285.0	COG1131@1|root,COG1131@2|Bacteria,4NFNM@976|Bacteroidetes,1IUZA@117747|Sphingobacteriia	976|Bacteroidetes	V	AAA domain, putative AbiEii toxin, Type IV TA system	-	-	-	ko:K20459	ko02010,map02010	M00813	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.124.3,3.A.1.124.4,3.A.1.124.5	-	-	ABC_tran
BYD3_k127_4736594_103	1124780.ANNU01000002_gene1503	1.962e-28	124.0	COG4200@1|root,COG4200@2|Bacteria,4NSB7@976|Bacteroidetes,47S9M@768503|Cytophagia	976|Bacteroidetes	S	ABC-2 family transporter protein	-	-	-	ko:K20461	ko02010,map02010	M00813	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.124.3,3.A.1.124.4,3.A.1.124.5	-	-	ABC2_membrane_4
BYD3_k127_4736594_18	509635.N824_26440	2.679e-163	518.0	COG2267@1|root,COG2267@2|Bacteria,4PN25@976|Bacteroidetes	976|Bacteroidetes	I	PFAM Alpha Beta hydrolase	-	-	-	-	-	-	-	-	-	-	-	-	Abhydrolase_1
BYD3_k127_4736594_12	391603.FBALC1_04537	1.994e-207	670.0	COG0577@1|root,COG0577@2|Bacteria,4NDUK@976|Bacteroidetes,1I08U@117743|Flavobacteriia	976|Bacteroidetes	V	COG0577 ABC-type antimicrobial peptide transport system permease component	-	-	-	-	-	-	-	-	-	-	-	-	FtsX,MacB_PCD
BYD3_k127_4736594_16	1123276.KB893301_gene4189	7.408e-179	570.0	COG0277@1|root,COG0277@2|Bacteria,4NHFC@976|Bacteroidetes,47M51@768503|Cytophagia	976|Bacteroidetes	C	Berberine and berberine like	-	-	-	-	-	-	-	-	-	-	-	-	BBE,DUF805,FAD_binding_4
BYD3_k127_4736594_36	1185876.BN8_02240	3.787e-119	398.0	COG0671@1|root,COG0671@2|Bacteria,4NF9W@976|Bacteroidetes,47M2K@768503|Cytophagia	976|Bacteroidetes	I	PFAM Phosphatidic acid phosphatase type 2 haloperoxidase	-	-	-	-	-	-	-	-	-	-	-	-	PAP2
BYD3_k127_4736594_74	714943.Mucpa_1801	7.244e-62	223.0	COG2207@1|root,COG2207@2|Bacteria,4NGWC@976|Bacteroidetes,1ITYF@117747|Sphingobacteriia	976|Bacteroidetes	K	helix_turn_helix, arabinose operon control protein	-	-	-	-	-	-	-	-	-	-	-	-	HTH_18
BYD3_k127_4736594_39	153721.MYP_1717	4.169e-112	369.0	COG1131@1|root,COG1131@2|Bacteria,4NMN9@976|Bacteroidetes,47VAE@768503|Cytophagia	976|Bacteroidetes	V	ATPases associated with a variety of cellular activities	-	-	-	ko:K01990	-	M00254	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	ABC_tran
BYD3_k127_4736594_52	742767.HMPREF9456_02316	1.872e-88	303.0	COG0842@1|root,COG0842@2|Bacteria,4NKB0@976|Bacteroidetes,2FW5E@200643|Bacteroidia	976|Bacteroidetes	V	ABC-2 type transporter	-	-	-	ko:K01992	-	M00254	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	ABC2_membrane,ABC2_membrane_3
BYD3_k127_4736594_79	1123248.KB893333_gene2824	8.357e-58	202.0	2AY99@1|root,31QBJ@2|Bacteria,4NNSA@976|Bacteroidetes	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	GIY-YIG
BYD3_k127_4736594_54	1121904.ARBP01000008_gene3425	2.678e-83	294.0	28K3C@1|root,2Z9SH@2|Bacteria,4NKA2@976|Bacteroidetes,47NBG@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_4736594_125	1203550.HMPREF1475_01613	7.468e-05	55.0	COG1305@1|root,COG1305@2|Bacteria,4NGQ2@976|Bacteroidetes,2FMDR@200643|Bacteroidia	976|Bacteroidetes	E	Transglutaminase-like superfamily	-	-	-	-	-	-	-	-	-	-	-	-	LRR_5,Transglut_core
BYD3_k127_4736594_68	234267.Acid_2730	3.318e-67	243.0	28PTH@1|root,2ZCER@2|Bacteria,3Y860@57723|Acidobacteria	57723|Acidobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_4736594_46	1123057.P872_16720	1.924e-98	326.0	COG0664@1|root,COG0664@2|Bacteria,4NJRX@976|Bacteroidetes,47QTJ@768503|Cytophagia	976|Bacteroidetes	T	Cyclic nucleotide-binding domain	-	-	-	-	-	-	-	-	-	-	-	-	cNMP_binding
BYD3_k127_4736594_58	1270193.JARP01000001_gene2281	4.584e-80	272.0	COG2085@1|root,COG2085@2|Bacteria,4NEC7@976|Bacteroidetes,1I1WM@117743|Flavobacteriia,2NW2K@237|Flavobacterium	976|Bacteroidetes	S	Shikimate / quinate 5-dehydrogenase	-	-	1.5.1.40	ko:K06988	-	-	-	-	ko00000,ko01000	-	-	-	F420_oxidored
BYD3_k127_4736594_57	760192.Halhy_1983	3.666e-81	275.0	COG3403@1|root,COG3403@2|Bacteria,4NHNG@976|Bacteroidetes,1IUTP@117747|Sphingobacteriia	976|Bacteroidetes	S	YqcI/YcgG family	-	-	-	-	-	-	-	-	-	-	-	-	DUF1080
BYD3_k127_4736594_43	362418.IW19_02450	2.036e-100	332.0	COG1028@1|root,COG1028@2|Bacteria,4NI46@976|Bacteroidetes	976|Bacteroidetes	IQ	with different specificities (related to short-chain alcohol	-	-	-	-	-	-	-	-	-	-	-	-	adh_short
BYD3_k127_4736594_92	1123276.KB893267_gene5063	1.058e-44	165.0	COG1359@1|root,COG1359@2|Bacteria,4NTAS@976|Bacteroidetes,47RZE@768503|Cytophagia	976|Bacteroidetes	S	Antibiotic biosynthesis monooxygenase	-	-	-	-	-	-	-	-	-	-	-	-	ABM,Amidohydro_2,CMD
BYD3_k127_4736594_116	504472.Slin_1951	8.755e-09	60.0	COG1917@1|root,COG1917@2|Bacteria,4NQHB@976|Bacteroidetes,47UWK@768503|Cytophagia	976|Bacteroidetes	S	Cupin domain	-	-	-	-	-	-	-	-	-	-	-	-	Cupin_2
BYD3_k127_4736594_13	1123248.KB893324_gene1714	1.507e-201	631.0	COG1064@1|root,COG1064@2|Bacteria,4NFGP@976|Bacteroidetes,1IWZ5@117747|Sphingobacteriia	976|Bacteroidetes	S	Alcohol dehydrogenase GroES-like domain	-	-	-	ko:K13979	-	-	-	-	ko00000,ko01000	-	-	-	ADH_N,ADH_zinc_N
BYD3_k127_4736594_17	1144313.PMI10_03061	3.186e-170	542.0	COG1073@1|root,COG1073@2|Bacteria,4NFJZ@976|Bacteroidetes,1HZ29@117743|Flavobacteriia,2NUH0@237|Flavobacterium	976|Bacteroidetes	S	X-Pro dipeptidyl-peptidase (S15 family)	-	-	-	ko:K06889	-	-	-	-	ko00000	-	-	-	AXE1,DLH,Peptidase_S15
BYD3_k127_4736594_28	471854.Dfer_0769	4.54e-140	449.0	COG2207@1|root,COG2207@2|Bacteria,4NEHD@976|Bacteroidetes,47KI7@768503|Cytophagia	976|Bacteroidetes	K	Transcriptional regulator, AraC family	-	-	-	-	-	-	-	-	-	-	-	-	HTH_18
BYD3_k127_4736594_53	1121904.ARBP01000030_gene1944	4.976e-86	287.0	COG0110@1|root,COG0110@2|Bacteria,4NH27@976|Bacteroidetes,47PKD@768503|Cytophagia	976|Bacteroidetes	S	Hexapeptide repeat of succinyl-transferase	-	-	-	-	-	-	-	-	-	-	-	-	Hexapep,Hexapep_2
BYD3_k127_4736594_6	1089547.KB913013_gene4772	6.32e-245	766.0	COG1231@1|root,COG1231@2|Bacteria,4PMAQ@976|Bacteroidetes,47N7X@768503|Cytophagia	976|Bacteroidetes	E	Protein of unknown function (DUF1593)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1593
BYD3_k127_4736594_119	1392490.JHZX01000001_gene1699	4.045e-08	55.0	2AY99@1|root,31QBJ@2|Bacteria,4NNSA@976|Bacteroidetes,1I2AG@117743|Flavobacteriia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	GIY-YIG
BYD3_k127_4736594_115	1089547.KB913013_gene3700	1.348e-09	65.0	COG4430@1|root,COG4430@2|Bacteria,4NW07@976|Bacteroidetes,47RVU@768503|Cytophagia	976|Bacteroidetes	S	Bacteriocin-protection, YdeI or OmpD-Associated	-	-	-	-	-	-	-	-	-	-	-	-	DUF1905,OmdA
BYD3_k127_4736594_114	1358423.N180_19230	3.064e-10	61.0	COG2207@1|root,COG2207@2|Bacteria,4NDYY@976|Bacteroidetes	976|Bacteroidetes	K	transcriptional regulator (AraC family)	-	-	-	-	-	-	-	-	-	-	-	-	HTH_18
BYD3_k127_4736594_105	204669.Acid345_3876	4.844e-23	103.0	COG5580@1|root,COG5580@2|Bacteria,3Y90D@57723|Acidobacteria,2JNT0@204432|Acidobacteriia	204432|Acidobacteriia	O	Activator of Hsp90 ATPase homolog 1-like protein	-	-	-	-	-	-	-	-	-	-	-	-	AHSA1
BYD3_k127_4736594_72	1506583.JQJY01000001_gene576	6.456e-63	225.0	COG1028@1|root,COG1028@2|Bacteria,4NF7M@976|Bacteroidetes,1HYQX@117743|Flavobacteriia,2NV91@237|Flavobacterium	976|Bacteroidetes	IQ	short-chain dehydrogenase	-	-	-	-	-	-	-	-	-	-	-	-	adh_short_C2
BYD3_k127_4736594_69	376686.Fjoh_4007	8.631e-67	235.0	COG1028@1|root,COG1028@2|Bacteria,4NF7M@976|Bacteroidetes,1HYQX@117743|Flavobacteriia,2NV91@237|Flavobacterium	976|Bacteroidetes	IQ	short-chain dehydrogenase	-	-	-	-	-	-	-	-	-	-	-	-	adh_short_C2
BYD3_k127_4736594_118	1500281.JQKZ01000028_gene3347	1.91e-08	60.0	COG1028@1|root,COG1028@2|Bacteria,4NF7M@976|Bacteroidetes,1HYQX@117743|Flavobacteriia,3ZREP@59732|Chryseobacterium	976|Bacteroidetes	IQ	KR domain	-	-	-	-	-	-	-	-	-	-	-	-	adh_short_C2
BYD3_k127_4736594_11	760192.Halhy_0730	1.4e-207	649.0	COG2382@1|root,COG2382@2|Bacteria,4NF50@976|Bacteroidetes,1IQGP@117747|Sphingobacteriia	976|Bacteroidetes	P	Putative esterase	-	-	-	-	-	-	-	-	-	-	-	-	Esterase,Glyco_hydro_10
BYD3_k127_4736594_5	1237149.C900_04113	9.094e-249	776.0	COG0659@1|root,COG0659@2|Bacteria,4NE9G@976|Bacteroidetes,47MPC@768503|Cytophagia	976|Bacteroidetes	P	COGs COG0659 Sulfate permease and related transporter (MFS superfamily)	-	-	-	ko:K03321	-	-	-	-	ko00000,ko02000	2.A.53.3	-	-	Sulfate_transp
BYD3_k127_4736594_42	1237149.C900_04112	7.897e-107	350.0	COG0288@1|root,COG0288@2|Bacteria,4NH0X@976|Bacteroidetes,47PCP@768503|Cytophagia	976|Bacteroidetes	P	Reversible hydration of carbon dioxide	-	-	4.2.1.1	ko:K01673	ko00910,map00910	-	R00132,R10092	RC02807	ko00000,ko00001,ko01000	-	-	-	Pro_CA
BYD3_k127_4736594_108	1237149.C900_04111	5.793e-20	91.0	COG1309@1|root,COG1309@2|Bacteria,4NEUA@976|Bacteroidetes,47P97@768503|Cytophagia	976|Bacteroidetes	K	Bacterial regulatory proteins, tetR family	-	-	-	-	-	-	-	-	-	-	-	-	TetR_N
BYD3_k127_4909515_88	1237149.C900_00528	1.399e-64	226.0	COG0664@1|root,COG0664@2|Bacteria,4NKW5@976|Bacteroidetes,47N83@768503|Cytophagia	976|Bacteroidetes	K	Crp-like helix-turn-helix domain	-	-	-	ko:K10914	ko02020,ko02024,ko02025,ko02026,ko05111,map02020,map02024,map02025,map02026,map05111	-	-	-	ko00000,ko00001,ko03000	-	-	-	HTH_Crp_2,cNMP_binding
BYD3_k127_4909515_68	929703.KE386491_gene3799	2.976e-82	281.0	COG3217@1|root,COG3217@2|Bacteria,4NG33@976|Bacteroidetes,47PMH@768503|Cytophagia	976|Bacteroidetes	S	beta barrel domain	-	-	-	ko:K07140	-	-	-	-	ko00000	-	-	-	MOSC,MOSC_N
BYD3_k127_4909515_90	1237149.C900_00530	8.129e-63	221.0	COG1981@1|root,COG1981@2|Bacteria,4NEWG@976|Bacteroidetes,47PXS@768503|Cytophagia	976|Bacteroidetes	S	PFAM Uncharacterised protein family (UPF0093)	-	-	-	ko:K08973	-	-	-	-	ko00000	-	-	-	UPF0093
BYD3_k127_4909515_70	1237149.C900_00531	5.023e-81	275.0	COG1999@1|root,COG1999@2|Bacteria,4NFH2@976|Bacteroidetes,47NK1@768503|Cytophagia	976|Bacteroidetes	S	protein SCO1 SenC PrrC involved in biogenesis of respiratory and photosynthetic systems	-	-	-	ko:K07152	-	-	-	-	ko00000,ko03029	-	-	-	SCO1-SenC
BYD3_k127_4909515_114	1237149.C900_00532	3.296e-37	145.0	COG2010@1|root,COG2010@2|Bacteria,4NTWV@976|Bacteroidetes,47REP@768503|Cytophagia	976|Bacteroidetes	C	Cytochrome c, class I	aniA	-	-	-	-	-	-	-	-	-	-	-	Cytochrom_C,Cytochrome_CBB3
BYD3_k127_4909515_121	1450525.JATV01000006_gene1044	6.545e-24	106.0	COG4704@1|root,COG4704@2|Bacteria,4NUS8@976|Bacteroidetes,1I45Z@117743|Flavobacteriia,2NX3W@237|Flavobacterium	976|Bacteroidetes	S	Uncharacterized protein conserved in bacteria (DUF2141)	-	-	-	-	-	-	-	-	-	-	-	-	DUF2141
BYD3_k127_4909515_80	700598.Niako_0548	2.922e-73	249.0	COG2080@1|root,COG2080@2|Bacteria,4NMVV@976|Bacteroidetes,1IXEY@117747|Sphingobacteriia	976|Bacteroidetes	C	COGs COG2080 Aerobic-type carbon monoxide dehydrogenase small subunit CoxS CutS homologs	-	-	1.3.99.16	ko:K07302	-	-	-	-	ko00000,ko01000	-	-	-	Fer2,Fer2_2
BYD3_k127_4909515_9	925409.KI911562_gene991	3.417e-318	989.0	COG1529@1|root,COG1529@2|Bacteria,4NFFU@976|Bacteroidetes,1IR1H@117747|Sphingobacteriia	976|Bacteroidetes	C	PFAM Aldehyde oxidase xanthine dehydrogenase, molybdopterin binding	-	-	1.3.99.16	ko:K07303	-	-	-	-	ko00000,ko01000	-	-	-	Ald_Xan_dh_C2
BYD3_k127_4909515_111	313606.M23134_07852	6.413e-42	158.0	COG2010@1|root,COG2010@2|Bacteria,4NEXP@976|Bacteroidetes,47R7P@768503|Cytophagia	976|Bacteroidetes	C	Cytochrome C oxidase, cbb3-type, subunit III	-	-	-	ko:K00405	ko00190,ko01100,ko02020,map00190,map01100,map02020	M00156	-	-	ko00000,ko00001,ko00002	3.D.4.3	-	-	Cytochrom_C,Cytochrome_CBB3
BYD3_k127_4909515_40	1237149.C900_00538	8.85e-137	446.0	COG1975@1|root,COG1975@2|Bacteria,4NG02@976|Bacteroidetes,47JA8@768503|Cytophagia	976|Bacteroidetes	O	Xanthine and CO dehydrogenases maturation factor, XdhC CoxF family	-	-	-	ko:K07402	-	-	-	-	ko00000	-	-	-	XdhC_C,XdhC_CoxI
BYD3_k127_4909515_10	1121904.ARBP01000005_gene4592	3.833e-281	881.0	COG4993@1|root,COG4993@2|Bacteria,4NFK0@976|Bacteroidetes,47KDI@768503|Cytophagia	976|Bacteroidetes	G	Pyrrolo-quinoline quinone	-	-	1.1.5.2	ko:K00117	ko00030,ko01100,ko01110,ko01130,map00030,map01100,map01110,map01130	-	R06620	RC00066	ko00000,ko00001,ko01000	-	-	-	Cytochrome_CBB3,PQQ,PQQ_2
BYD3_k127_4909515_108	761193.Runsl_4804	1.256e-44	169.0	COG2068@1|root,COG2068@2|Bacteria,4NQNF@976|Bacteroidetes,47PUQ@768503|Cytophagia	976|Bacteroidetes	S	MobA-like NTP transferase domain	-	-	2.7.7.76	ko:K07141	ko00790,map00790	-	R11582	-	ko00000,ko00001,ko01000	-	-	-	NTP_transf_3
BYD3_k127_4909515_97	1121904.ARBP01000001_gene5730	1.095e-54	192.0	COG0051@1|root,COG0051@2|Bacteria,4NQ65@976|Bacteroidetes,47Q8W@768503|Cytophagia	976|Bacteroidetes	J	Involved in the binding of tRNA to the ribosomes	rpsJ	GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904	-	ko:K02946	ko03010,map03010	M00178,M00179	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_S10
BYD3_k127_4909515_3	1279009.ADICEAN_00794	0.0	1200.0	COG0480@1|root,COG0480@2|Bacteria,4NE9X@976|Bacteroidetes,47M8E@768503|Cytophagia	976|Bacteroidetes	J	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome	fusA	-	-	ko:K02355	-	-	-	-	ko00000,ko03012,ko03029	-	-	-	EFG_C,EFG_II,EFG_IV,GTP_EFTU,GTP_EFTU_D2
BYD3_k127_4909515_72	1237149.C900_04679	2.458e-79	266.0	COG0049@1|root,COG0049@2|Bacteria,4NEEM@976|Bacteroidetes,47P7P@768503|Cytophagia	976|Bacteroidetes	J	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA	rpsG	GO:0000028,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904	-	ko:K02992	ko03010,map03010	M00178,M00179	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_S7
BYD3_k127_4909515_81	1121373.KB903663_gene1157	2.306e-72	245.0	COG0048@1|root,COG0048@2|Bacteria,4NM3Y@976|Bacteroidetes,47PCE@768503|Cytophagia	976|Bacteroidetes	J	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit	rpsL	GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904	-	ko:K02950	ko03010,map03010	M00178,M00179	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosom_S12_S23
BYD3_k127_4909515_103	153721.MYP_4173	3.797e-50	179.0	COG4191@1|root,COG4191@2|Bacteria,4NSNP@976|Bacteroidetes,47R37@768503|Cytophagia	976|Bacteroidetes	T	Protein of unknown function (DUF3467)	-	-	-	-	-	-	-	-	-	-	-	-	DUF3467
BYD3_k127_4909515_1	1237149.C900_04676	0.0	2498.0	COG0086@1|root,COG0086@2|Bacteria,4NEMW@976|Bacteroidetes,47JP0@768503|Cytophagia	976|Bacteroidetes	K	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates	rpoC	GO:0000428,GO:0005575,GO:0005622,GO:0005623,GO:0030880,GO:0032991,GO:0044424,GO:0044464,GO:0061695,GO:1902494,GO:1990234	2.7.7.6	ko:K03046	ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020	M00183	R00435,R00441,R00442,R00443	RC02795	br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400	-	-	-	RNA_pol_Rpb1_1,RNA_pol_Rpb1_2,RNA_pol_Rpb1_3,RNA_pol_Rpb1_4,RNA_pol_Rpb1_5
BYD3_k127_4909515_2	1237149.C900_04675	0.0	2259.0	COG0085@1|root,COG0085@2|Bacteria,4NF8D@976|Bacteroidetes,47JXH@768503|Cytophagia	976|Bacteroidetes	K	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates	rpoB	GO:0000428,GO:0005575,GO:0005622,GO:0005623,GO:0030880,GO:0032991,GO:0044424,GO:0044464,GO:0061695,GO:1902494,GO:1990234	2.7.7.6	ko:K03043	ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020	M00183	R00435,R00441,R00442,R00443	RC02795	br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400	-	-	-	RNA_pol_Rpb2_1,RNA_pol_Rpb2_2,RNA_pol_Rpb2_3,RNA_pol_Rpb2_45,RNA_pol_Rpb2_6,RNA_pol_Rpb2_7
BYD3_k127_4909515_102	1237149.C900_04674	5.676e-51	183.0	COG0222@1|root,COG0222@2|Bacteria,4NQAQ@976|Bacteroidetes,47PSQ@768503|Cytophagia	976|Bacteroidetes	J	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation	rplL	-	-	ko:K02935	ko03010,map03010	M00178	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_L12,Ribosomal_L12_N
BYD3_k127_4909515_87	1123057.P872_23055	1.723e-65	228.0	COG0244@1|root,COG0244@2|Bacteria,4NFFK@976|Bacteroidetes,47JGP@768503|Cytophagia	976|Bacteroidetes	J	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors	rplJ	-	-	ko:K02864	ko03010,map03010	M00178,M00179	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_L10
BYD3_k127_4909515_47	153721.MYP_4168	2.296e-111	363.0	COG0081@1|root,COG0081@2|Bacteria,4NEIC@976|Bacteroidetes,47JJZ@768503|Cytophagia	976|Bacteroidetes	J	Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release	rplA	GO:0000470,GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006139,GO:0006364,GO:0006396,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016070,GO:0016072,GO:0019538,GO:0022613,GO:0022625,GO:0022626,GO:0032991,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0042254,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904	-	ko:K02863	ko03010,map03010	M00178,M00179	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_L1
BYD3_k127_4909515_73	1237149.C900_04671	3.959e-78	262.0	COG0080@1|root,COG0080@2|Bacteria,4NM60@976|Bacteroidetes,47PEZ@768503|Cytophagia	976|Bacteroidetes	J	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors	rplK	GO:0000027,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904	-	ko:K02867	ko03010,map03010	M00178,M00179	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_L11,Ribosomal_L11_N
BYD3_k127_4909515_51	1237149.C900_04670	2.621e-104	340.0	COG0250@1|root,COG0250@2|Bacteria,4NF2X@976|Bacteroidetes,47KBF@768503|Cytophagia	976|Bacteroidetes	K	Participates in transcription elongation, termination and antitermination	nusG	-	-	ko:K02601	-	-	-	-	ko00000,ko03009,ko03021	-	-	-	KOW,NusG
BYD3_k127_4909515_122	1237149.C900_04669	2.333e-20	91.0	COG0690@1|root,COG0690@2|Bacteria,4NX53@976|Bacteroidetes,47RVC@768503|Cytophagia	976|Bacteroidetes	U	Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation	secE	-	-	ko:K03073	ko02024,ko03060,ko03070,map02024,map03060,map03070	M00335	-	-	ko00000,ko00001,ko00002,ko02044	3.A.5.1,3.A.5.2	-	-	SecE
BYD3_k127_4909515_17	1166018.FAES_1088	3.614e-229	712.0	COG0050@1|root,COG0050@2|Bacteria,4NEWS@976|Bacteroidetes,47JYT@768503|Cytophagia	976|Bacteroidetes	J	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis	tuf	-	-	ko:K02358	-	-	-	-	ko00000,ko03012,ko03029,ko04147	-	-	-	GTP_EFTU,GTP_EFTU_D2,GTP_EFTU_D3
BYD3_k127_4909515_134	1158294.JOMI01000009_gene919	1.943e-06	49.0	2DR8D@1|root,33ANQ@2|Bacteria,4NYGG@976|Bacteroidetes,2FVPJ@200643|Bacteroidia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_4909515_133	1122971.BAME01000045_gene3896	3.08e-07	53.0	293V0@1|root,2ZRA7@2|Bacteria,4P8QC@976|Bacteroidetes,2FVS2@200643|Bacteroidia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_4909515_120	1237149.C900_04667	1.516e-25	108.0	COG5512@1|root,COG5512@2|Bacteria,4NXIK@976|Bacteroidetes,47S8C@768503|Cytophagia	976|Bacteroidetes	S	Protein of unknown function (DUF721)	-	-	-	-	-	-	-	-	-	-	-	-	DUF721
BYD3_k127_4909515_48	1124780.ANNU01000006_gene2886	2.406e-109	365.0	COG1195@1|root,COG1195@2|Bacteria,4NFHN@976|Bacteroidetes,47JMB@768503|Cytophagia	976|Bacteroidetes	L	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP	recF	GO:0000731,GO:0006139,GO:0006259,GO:0006281,GO:0006302,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0018130,GO:0019438,GO:0033554,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0071897,GO:0090304,GO:1901360,GO:1901362,GO:1901576	-	ko:K03629	ko03440,map03440	-	-	-	ko00000,ko00001,ko03400	-	-	-	AAA_15,SMC_N
BYD3_k127_4909515_25	504472.Slin_5509	5.28e-169	537.0	COG1071@1|root,COG1071@2|Bacteria,4NF2J@976|Bacteroidetes,47M0Z@768503|Cytophagia	976|Bacteroidetes	C	The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2)	pdhA	-	1.2.4.1	ko:K00161	ko00010,ko00020,ko00620,ko01100,ko01110,ko01120,ko01130,ko01200,ko04066,ko04922,ko05230,map00010,map00020,map00620,map01100,map01110,map01120,map01130,map01200,map04066,map04922,map05230	M00307	R00014,R00209,R01699,R03270	RC00004,RC00027,RC00627,RC02742,RC02744,RC02882	br01601,ko00000,ko00001,ko00002,ko01000	-	-	-	E1_dh
BYD3_k127_4909515_64	1237149.C900_04663	2.897e-86	290.0	COG1729@1|root,COG1729@2|Bacteria,4NEM2@976|Bacteroidetes,47PPQ@768503|Cytophagia	976|Bacteroidetes	S	Tetratricopeptide repeat	-	-	-	-	-	-	-	-	-	-	-	-	TPR_16,TPR_21,TPR_6,TPR_7,TPR_8
BYD3_k127_4909515_89	926556.Echvi_1219	3.669e-64	222.0	COG0054@1|root,COG0054@2|Bacteria,4NNUC@976|Bacteroidetes,47PCJ@768503|Cytophagia	976|Bacteroidetes	H	Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin	ribH	GO:0000906,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006766,GO:0006767,GO:0006771,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009231,GO:0009987,GO:0016740,GO:0016765,GO:0017144,GO:0018130,GO:0034641,GO:0042364,GO:0042726,GO:0042727,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576	2.5.1.78	ko:K00794	ko00740,ko01100,ko01110,map00740,map01100,map01110	M00125	R04457	RC00960	ko00000,ko00001,ko00002,ko01000	-	-	-	DMRL_synthase
BYD3_k127_4909515_19	1313301.AUGC01000001_gene1409	6.645e-225	701.0	COG0538@1|root,COG0538@2|Bacteria,4PKW6@976|Bacteroidetes	976|Bacteroidetes	C	Isocitrate dehydrogenase	icd	-	1.1.1.42	ko:K00031	ko00020,ko00480,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01210,ko01230,ko04146,map00020,map00480,map00720,map01100,map01110,map01120,map01130,map01200,map01210,map01230,map04146	M00009,M00010,M00173,M00740	R00267,R00268,R01899	RC00001,RC00084,RC00114,RC00626,RC02801	br01601,ko00000,ko00001,ko00002,ko01000	-	-	-	Iso_dh
BYD3_k127_4909515_77	1237149.C900_02945	4.31e-76	259.0	COG2340@1|root,COG2340@2|Bacteria,4NRNN@976|Bacteroidetes,47RRN@768503|Cytophagia	976|Bacteroidetes	S	Cysteine-rich secretory protein family	-	-	-	-	-	-	-	-	-	-	-	-	CAP
BYD3_k127_4909515_30	1279009.ADICEAN_02496	7.817e-162	514.0	COG0074@1|root,COG0074@2|Bacteria,4NE6B@976|Bacteroidetes,47K03@768503|Cytophagia	976|Bacteroidetes	C	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit	sucD	-	6.2.1.5	ko:K01902	ko00020,ko00640,ko00660,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00640,map00660,map00720,map01100,map01110,map01120,map01130,map01200	M00009,M00011,M00173,M00374,M00620	R00405,R02404	RC00004,RC00014	ko00000,ko00001,ko00002,ko01000	-	-	-	CoA_binding,Ligase_CoA,Succ_CoA_lig
BYD3_k127_4909515_79	1237149.C900_03796	2.853e-73	258.0	2BHR8@1|root,32BUM@2|Bacteria,4NR4P@976|Bacteroidetes,47QNP@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_4909515_58	1237149.C900_03796	8.443e-93	313.0	2BHR8@1|root,32BUM@2|Bacteria,4NR4P@976|Bacteroidetes,47QNP@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_4909515_46	1237149.C900_03797	3.019e-123	408.0	COG4252@1|root,COG4252@2|Bacteria,4NMM6@976|Bacteroidetes,47PFU@768503|Cytophagia	976|Bacteroidetes	T	CHASE2 domain	-	-	-	-	-	-	-	-	-	-	-	-	CHASE2
BYD3_k127_4909515_56	929556.Solca_3067	5.088e-100	336.0	COG1703@1|root,COG1703@2|Bacteria,4NE7Y@976|Bacteroidetes,1IQ92@117747|Sphingobacteriia	976|Bacteroidetes	E	LAO AO transport system ATPase	argK	-	-	ko:K07588	-	-	-	-	ko00000,ko01000	-	-	-	ArgK
BYD3_k127_4909515_83	1237149.C900_03799	3.307e-71	250.0	COG2102@1|root,COG2102@2|Bacteria,4NFQ4@976|Bacteroidetes,47Q0E@768503|Cytophagia	976|Bacteroidetes	S	Diphthamide synthase	-	-	-	-	-	-	-	-	-	-	-	-	Diphthami_syn_2
BYD3_k127_4909515_100	1185876.BN8_00264	4.514e-52	208.0	COG4206@1|root,COG4206@2|Bacteria,4NHH8@976|Bacteroidetes,47PMZ@768503|Cytophagia	976|Bacteroidetes	H	TonB dependent receptor	btuB	-	-	ko:K16092	-	-	-	-	ko00000,ko02000	1.B.14.3	-	-	Plug,TonB_dep_Rec
BYD3_k127_4909515_36	1237149.C900_03808	1.425e-145	472.0	COG0614@1|root,COG0614@2|Bacteria,4NH9F@976|Bacteroidetes,47MZX@768503|Cytophagia	976|Bacteroidetes	P	PFAM periplasmic binding protein	btuF	-	-	ko:K02016	ko02010,map02010	M00240	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.14	-	-	Peripla_BP_2
BYD3_k127_4909515_21	1237149.C900_02885	4.748e-213	669.0	COG0491@1|root,COG2897@1|root,COG0491@2|Bacteria,COG2897@2|Bacteria,4NE2Y@976|Bacteroidetes,47KD4@768503|Cytophagia	976|Bacteroidetes	P	COGs COG0491 Zn-dependent hydrolase including glyoxylase	-	-	-	-	-	-	-	-	-	-	-	-	Lactamase_B,Rhodanese
BYD3_k127_4909515_35	1237149.C900_02886	4.439e-146	487.0	COG0515@1|root,COG0515@2|Bacteria	1237149.C900_02886|-	KLT	protein kinase activity	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_4909515_33	643867.Ftrac_3711	1.395e-155	496.0	COG4864@1|root,COG4864@2|Bacteria,4NGG6@976|Bacteroidetes,47KKM@768503|Cytophagia	976|Bacteroidetes	S	UPF0365 protein	-	-	-	-	-	-	-	-	-	-	-	-	YdfA_immunity
BYD3_k127_4909515_110	1237149.C900_02887	2.167e-43	164.0	COG1030@1|root,COG1030@2|Bacteria,4NW09@976|Bacteroidetes,47S4B@768503|Cytophagia	976|Bacteroidetes	O	NfeD-like C-terminal, partner-binding	-	-	-	-	-	-	-	-	-	-	-	-	NfeD
BYD3_k127_4909515_14	926551.KB900704_gene668	9.63e-249	774.0	COG0442@1|root,COG0442@2|Bacteria,4NEAF@976|Bacteroidetes,1HXK2@117743|Flavobacteriia,1ER4P@1016|Capnocytophaga	976|Bacteroidetes	J	Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro)	proS	-	6.1.1.15	ko:K01881	ko00970,map00970	M00359,M00360	R03661	RC00055,RC00523	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	-	-	-	HGTP_anticodon,ProRS-C_1,tRNA-synt_2b
BYD3_k127_4909515_128	1237149.C900_04730	1.239e-13	82.0	2CJG0@1|root,332HN@2|Bacteria,4NM27@976|Bacteroidetes,47M0N@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_4909515_62	1123057.P872_15110	3.461e-88	310.0	COG2067@1|root,COG2067@2|Bacteria,4NFS7@976|Bacteroidetes,47K28@768503|Cytophagia	976|Bacteroidetes	I	PFAM Outer membrane protein transport protein (OMPP1 FadL TodX)	-	-	-	-	-	-	-	-	-	-	-	-	Toluene_X
BYD3_k127_4909515_115	1288963.ADIS_4481	7.367e-36	141.0	COG0703@1|root,COG0703@2|Bacteria,4NQ73@976|Bacteroidetes,47QWF@768503|Cytophagia	976|Bacteroidetes	F	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate	aroK	GO:0000287,GO:0003674,GO:0003824,GO:0004765,GO:0005488,GO:0006082,GO:0006520,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009987,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019438,GO:0019632,GO:0019752,GO:0032787,GO:0043167,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046872,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901615	2.7.1.71	ko:K00891	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	M00022	R02412	RC00002,RC00078	ko00000,ko00001,ko00002,ko01000	-	-	-	SKI
BYD3_k127_4909515_42	1237149.C900_04727	5.568e-135	439.0	COG2259@1|root,COG2259@2|Bacteria,4NGNF@976|Bacteroidetes,47JTZ@768503|Cytophagia	976|Bacteroidetes	S	DoxX family	doxX	-	-	-	-	-	-	-	-	-	-	-	DoxX
BYD3_k127_4909515_65	1237149.C900_04726	2.992e-85	285.0	28HFG@1|root,2Z7RJ@2|Bacteria,4NFNY@976|Bacteroidetes,47PDT@768503|Cytophagia	976|Bacteroidetes	S	Domain of Unknown Function (DUF1599)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1599
BYD3_k127_4909515_54	391603.FBALC1_04087	1.875e-100	337.0	COG0294@1|root,COG0294@2|Bacteria,4NEYJ@976|Bacteroidetes,1HXJ4@117743|Flavobacteriia	976|Bacteroidetes	H	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives	folP	-	2.5.1.15	ko:K00796	ko00790,ko01100,map00790,map01100	M00126,M00841	R03066,R03067	RC00121,RC00842	ko00000,ko00001,ko00002,ko01000	-	-	-	Pterin_bind
BYD3_k127_4909515_49	1237149.C900_04724	2.584e-107	355.0	COG1624@1|root,COG1624@2|Bacteria,4NG3Z@976|Bacteroidetes,47JT6@768503|Cytophagia	976|Bacteroidetes	S	Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria	dacA	-	-	-	-	-	-	-	-	-	-	-	DisA_N
BYD3_k127_4909515_6	153721.MYP_3768	0.0	1027.0	COG2319@1|root,COG4249@1|root,COG2319@2|Bacteria,COG4249@2|Bacteria,4NKC3@976|Bacteroidetes,47NP5@768503|Cytophagia	976|Bacteroidetes	S	Caspase domain	-	-	-	-	-	-	-	-	-	-	-	-	Peptidase_C14,WD40
BYD3_k127_4909515_137	866536.Belba_0095	0.0002708	49.0	28WX7@1|root,2ZIWD@2|Bacteria,4P8MZ@976|Bacteroidetes,47WMD@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_4909515_23	1237149.C900_04723	6.043e-204	640.0	COG0156@1|root,COG0156@2|Bacteria,4NFBU@976|Bacteroidetes,47MGP@768503|Cytophagia	976|Bacteroidetes	H	Catalyzes the cleavage of 2-amino-3-ketobutyrate to glycine and acetyl-CoA	kbl	-	2.3.1.29	ko:K00639	ko00260,map00260	-	R00371	RC00004,RC00394	ko00000,ko00001,ko01000,ko01007	-	-	-	Aminotran_1_2
BYD3_k127_4909515_125	1237149.C900_04722	1.858e-15	79.0	2EHKD@1|root,33BC6@2|Bacteria,4NXIJ@976|Bacteroidetes,47SW0@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_4909515_43	1237149.C900_04719	9.506e-133	430.0	COG0451@1|root,COG0451@2|Bacteria,4NE3U@976|Bacteroidetes,47JUZ@768503|Cytophagia	976|Bacteroidetes	M	PFAM NAD dependent epimerase dehydratase family	ltd	-	-	-	-	-	-	-	-	-	-	-	Epimerase
BYD3_k127_4909515_119	1237149.C900_04718	8.242e-28	126.0	COG2353@1|root,COG2353@2|Bacteria,4PP17@976|Bacteroidetes,47YSH@768503|Cytophagia	976|Bacteroidetes	G	YceI-like domain	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_4909515_59	1237149.C900_04716	2.157e-91	308.0	COG1024@1|root,COG1024@2|Bacteria,4NFEM@976|Bacteroidetes,47JUC@768503|Cytophagia	976|Bacteroidetes	I	Belongs to the enoyl-CoA hydratase isomerase family	crt	-	4.2.1.17	ko:K01715	ko00650,ko01200,map00650,map01200	-	R03026	RC00831	ko00000,ko00001,ko01000	-	-	-	ECH_1
BYD3_k127_4909515_41	1124780.ANNU01000028_gene992	1.754e-135	446.0	COG2244@1|root,COG2244@2|Bacteria,4NDZ0@976|Bacteroidetes,47MQE@768503|Cytophagia	976|Bacteroidetes	S	Polysaccharide biosynthesis protein	cap	-	-	-	-	-	-	-	-	-	-	-	Polysacc_synt,Polysacc_synt_3,Polysacc_synt_C
BYD3_k127_4909515_37	1124780.ANNU01000028_gene994	6.016e-143	460.0	COG1208@1|root,COG1208@2|Bacteria,4NE97@976|Bacteroidetes,47ND5@768503|Cytophagia	976|Bacteroidetes	JM	Nucleotidyl transferase	rffH	-	2.7.7.24	ko:K00973	ko00521,ko00523,ko00525,ko01130,map00521,map00523,map00525,map01130	M00793	R02328	RC00002	ko00000,ko00001,ko00002,ko01000	-	-	-	Hexapep,NTP_transferase
BYD3_k127_4909515_29	1237149.C900_04713	2.021e-163	533.0	COG0457@1|root,COG0457@2|Bacteria,4NDVW@976|Bacteroidetes,47KE1@768503|Cytophagia	976|Bacteroidetes	S	PFAM Tetratricopeptide	-	-	-	-	-	-	-	-	-	-	-	-	TPR_16,TPR_19,TPR_2,TPR_6,TPR_8
BYD3_k127_4909515_109	761193.Runsl_0815	3.848e-44	170.0	COG2834@1|root,COG2834@2|Bacteria,4NFYQ@976|Bacteroidetes,47N94@768503|Cytophagia	976|Bacteroidetes	M	Domain of unknown function (DUF4292)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4292
BYD3_k127_4909515_44	1237149.C900_04711	3.02e-128	422.0	COG4942@1|root,COG4942@2|Bacteria,4NH2T@976|Bacteroidetes,47JWJ@768503|Cytophagia	976|Bacteroidetes	D	Peptidase, M23	envC	-	-	-	-	-	-	-	-	-	-	-	Peptidase_M23
BYD3_k127_4909515_127	761193.Runsl_3018	3.169e-14	75.0	COG1826@1|root,COG1826@2|Bacteria,4NUNH@976|Bacteroidetes,47S09@768503|Cytophagia	976|Bacteroidetes	U	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system	tatA	-	-	ko:K03116	ko03060,ko03070,map03060,map03070	M00336	-	-	ko00000,ko00001,ko00002,ko02044	2.A.64	-	-	MttA_Hcf106
BYD3_k127_4909515_20	1237149.C900_04709	1.106e-213	672.0	COG0154@1|root,COG0154@2|Bacteria,4NF8C@976|Bacteroidetes,47JDQ@768503|Cytophagia	976|Bacteroidetes	J	Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln)	gatA	-	6.3.5.6,6.3.5.7	ko:K02433	ko00970,ko01100,map00970,map01100	-	R03905,R04212	RC00010	ko00000,ko00001,ko01000,ko03029	-	-	-	Amidase
BYD3_k127_4909515_24	1237149.C900_04708	2.811e-181	579.0	COG0741@1|root,COG1388@1|root,COG0741@2|Bacteria,COG1388@2|Bacteria,4NEKW@976|Bacteroidetes,47KJK@768503|Cytophagia	976|Bacteroidetes	M	PFAM Transglycosylase SLT domain	mltD	-	-	ko:K08307	-	-	-	-	ko00000,ko01000,ko01011	-	-	-	LysM,SLT
BYD3_k127_4909515_63	1237149.C900_04707	1.88e-87	301.0	COG0322@1|root,COG0322@2|Bacteria,4NGEV@976|Bacteroidetes,47NDQ@768503|Cytophagia	976|Bacteroidetes	L	Domain of unknown function (DUF4837)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4837
BYD3_k127_4909515_92	643867.Ftrac_2626	1.982e-61	232.0	COG4251@1|root,COG4372@1|root,COG4251@2|Bacteria,COG4372@2|Bacteria,4NP5A@976|Bacteroidetes,47PX4@768503|Cytophagia	976|Bacteroidetes	T	7TM diverse intracellular signalling	-	-	-	-	-	-	-	-	-	-	-	-	7TMR-DISMED2,7TMR-DISM_7TM,HATPase_c
BYD3_k127_4909515_4	1237149.C900_04706	0.0	1154.0	COG0280@1|root,COG0281@1|root,COG0280@2|Bacteria,COG0281@2|Bacteria,4NFUJ@976|Bacteroidetes,47JSR@768503|Cytophagia	976|Bacteroidetes	C	Phosphate acetyl butaryl transferase	maeB	-	1.1.1.38,1.1.1.40	ko:K00027,ko:K00029	ko00620,ko00710,ko01100,ko01120,ko01200,ko02020,map00620,map00710,map01100,map01120,map01200,map02020	M00169,M00172	R00214,R00216	RC00105	ko00000,ko00001,ko00002,ko01000	-	-	-	Malic_M,PTA_PTB,malic
BYD3_k127_4909515_85	1237149.C900_04705	2.739e-69	240.0	COG0632@1|root,COG0632@2|Bacteria,4NF4E@976|Bacteroidetes,47N8D@768503|Cytophagia	976|Bacteroidetes	L	The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB	ruvA	-	3.6.4.12	ko:K03550	ko03440,map03440	-	-	-	ko00000,ko00001,ko01000,ko03400	-	-	-	HHH_5,RuvA_C,RuvA_N
BYD3_k127_4909515_0	1237149.C900_04704	0.0	2765.0	COG4797@1|root,COG4797@2|Bacteria,4PKQS@976|Bacteroidetes,47K4H@768503|Cytophagia	976|Bacteroidetes	D	Motility related/secretion protein	sprA	-	-	-	-	-	-	-	-	-	-	-	SprA_N
BYD3_k127_4909515_98	762903.Pedsa_3278	2.296e-53	190.0	COG0509@1|root,COG0509@2|Bacteria,4NQ35@976|Bacteroidetes,1IT1E@117747|Sphingobacteriia	976|Bacteroidetes	E	The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein	gcvH	-	-	ko:K02437	ko00260,ko00630,ko01100,ko01110,ko01130,ko01200,map00260,map00630,map01100,map01110,map01130,map01200	M00532	R01221	RC00022,RC02834	ko00000,ko00001,ko00002	-	-	-	GCV_H
BYD3_k127_4909515_28	1237149.C900_01774	3.167e-164	519.0	COG0320@1|root,COG0320@2|Bacteria,4NEB5@976|Bacteroidetes,47JGZ@768503|Cytophagia	976|Bacteroidetes	H	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives	lipA	-	2.8.1.8	ko:K03644	ko00785,ko01100,map00785,map01100	-	R07767,R07768	RC01978	ko00000,ko00001,ko01000	-	-	-	LIAS_N,Radical_SAM
BYD3_k127_4909515_112	1237149.C900_02852	1.495e-39	152.0	2E0QA@1|root,32W90@2|Bacteria,4NUC6@976|Bacteroidetes,47RSZ@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_4909515_138	247639.MGP2080_10388	0.0002799	46.0	COG0491@1|root,COG0491@2|Bacteria,1PHBX@1224|Proteobacteria	1224|Proteobacteria	S	COG0491 Zn-dependent hydrolases, including glyoxylases	attM	-	3.1.1.81	ko:K13075	ko02024,map02024	-	R08970	RC00713	ko00000,ko00001,ko01000	-	-	-	Lactamase_B
BYD3_k127_4909515_131	1353276.JADR01000002_gene2021	4.258e-09	59.0	COG0491@1|root,COG0491@2|Bacteria,4NJZR@976|Bacteroidetes,1HZBW@117743|Flavobacteriia	976|Bacteroidetes	S	Metallo-beta-lactamase superfamily	-	-	-	-	-	-	-	-	-	-	-	-	Lactamase_B
BYD3_k127_4909515_123	1270196.JCKI01000008_gene1478	3.989e-20	93.0	COG1254@1|root,COG1254@2|Bacteria,4NVB4@976|Bacteroidetes,1ITWQ@117747|Sphingobacteriia	976|Bacteroidetes	C	Belongs to the acylphosphatase family	acyP	-	3.6.1.7	ko:K01512	ko00620,ko00627,ko01120,map00620,map00627,map01120	-	R00317,R01421,R01515	RC00043	ko00000,ko00001,ko01000	-	-	-	Acylphosphatase
BYD3_k127_4909515_12	378806.STAUR_3216	4.433e-256	799.0	COG1012@1|root,COG1012@2|Bacteria,1R3TA@1224|Proteobacteria,42PG8@68525|delta/epsilon subdivisions,2WKCP@28221|Deltaproteobacteria,2YXAX@29|Myxococcales	28221|Deltaproteobacteria	C	Aldehyde dehydrogenase family	-	-	1.2.1.9	ko:K00131	ko00010,ko00030,ko01100,ko01120,ko01200,map00010,map00030,map01100,map01120,map01200	M00308,M00633	R01058	RC00242	ko00000,ko00001,ko00002,ko01000	-	-	-	Aldedh
BYD3_k127_4909515_66	1237149.C900_02850	1.059e-83	282.0	COG0274@1|root,COG0274@2|Bacteria,4NGE3@976|Bacteroidetes,47NPE@768503|Cytophagia	976|Bacteroidetes	F	Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate	deoC	GO:0003674,GO:0003824,GO:0004139,GO:0005975,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009117,GO:0009166,GO:0009262,GO:0009264,GO:0009987,GO:0016052,GO:0016829,GO:0016830,GO:0016832,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0046434,GO:0046483,GO:0046700,GO:0055086,GO:0071704,GO:1901135,GO:1901136,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901575,GO:1901576	4.1.2.4	ko:K01619	ko00030,map00030	-	R01066	RC00436,RC00437	ko00000,ko00001,ko01000	-	-	-	DeoC
BYD3_k127_4909515_118	1237149.C900_02848	1.059e-28	122.0	COG1525@1|root,COG1525@2|Bacteria,4NT3S@976|Bacteroidetes,47RZB@768503|Cytophagia	976|Bacteroidetes	L	Staphylococcal nuclease homologues	-	-	3.1.31.1	ko:K01174	-	-	-	-	ko00000,ko01000	-	-	-	SNase
BYD3_k127_4909515_11	1237149.C900_00497	5.911e-264	853.0	COG0457@1|root,COG0457@2|Bacteria,4NGGZ@976|Bacteroidetes	976|Bacteroidetes	S	tetratricopeptide repeat	-	-	-	-	-	-	-	-	-	-	-	-	TPR_1,TPR_11,TPR_16,TPR_8
BYD3_k127_4909515_101	643867.Ftrac_3317	1.756e-51	192.0	COG5343@1|root,COG5343@2|Bacteria,4NI2H@976|Bacteroidetes,47M55@768503|Cytophagia	976|Bacteroidetes	S	PFAM Anti-sigma-K factor RskA	-	-	-	-	-	-	-	-	-	-	-	-	RskA
BYD3_k127_4909515_96	643867.Ftrac_3318	7.02e-55	201.0	COG1595@1|root,COG1595@2|Bacteria,4NMIY@976|Bacteroidetes,47QEF@768503|Cytophagia	976|Bacteroidetes	K	Belongs to the sigma-70 factor family. ECF subfamily	-	-	-	ko:K03088	-	-	-	-	ko00000,ko03021	-	-	-	Sigma70_r2,Sigma70_r4,Sigma70_r4_2
BYD3_k127_4909515_78	1131812.JQMS01000001_gene2336	5.955e-74	254.0	29ZMS@1|root,30MNA@2|Bacteria,4NGT7@976|Bacteroidetes,1HZ2K@117743|Flavobacteriia,2NSNA@237|Flavobacterium	976|Bacteroidetes	S	Domain of unknown function (DUF4331)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4331
BYD3_k127_4909515_91	1122176.KB903532_gene2649	6.002e-62	217.0	28IYJ@1|root,2Z8W9@2|Bacteria,4NJ8H@976|Bacteroidetes,1IXX5@117747|Sphingobacteriia	976|Bacteroidetes	S	Domain of unknown function (DUF4331)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4331
BYD3_k127_4909515_67	1392490.JHZX01000001_gene2793	2.402e-82	291.0	COG3063@1|root,COG3063@2|Bacteria,4PM8F@976|Bacteroidetes,1IJMN@117743|Flavobacteriia	976|Bacteroidetes	NU	Tetratricopeptide repeat	-	-	-	-	-	-	-	-	-	-	-	-	TPR_12,TPR_19,TPR_8
BYD3_k127_4909515_15	1237149.C900_00494	1.084e-244	776.0	COG4206@1|root,COG4206@2|Bacteria,4PKCR@976|Bacteroidetes,47Y24@768503|Cytophagia	976|Bacteroidetes	H	TonB dependent receptor	-	-	-	-	-	-	-	-	-	-	-	-	CarbopepD_reg_2,Plug,TonB_dep_Rec
BYD3_k127_4909515_53	1237149.C900_02858	5.877e-101	335.0	COG2227@1|root,COG2227@2|Bacteria,4NFHE@976|Bacteroidetes,47JIB@768503|Cytophagia	976|Bacteroidetes	H	Methionine biosynthesis protein MetW	-	-	-	-	-	-	-	-	-	-	-	-	Methyltransf_11
BYD3_k127_4909515_99	1237149.C900_02857	2.781e-52	200.0	28H6U@1|root,2Z7J5@2|Bacteria,4NHUU@976|Bacteroidetes,47JR6@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_4909515_55	313606.M23134_07699	3.202e-100	331.0	COG0313@1|root,COG0313@2|Bacteria,4NFQM@976|Bacteroidetes,47JDW@768503|Cytophagia	976|Bacteroidetes	H	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA	rsmI	-	2.1.1.198	ko:K07056	-	-	-	-	ko00000,ko01000,ko03009	-	-	-	TP_methylase
BYD3_k127_4909515_136	485918.Cpin_6937	3.609e-05	55.0	COG0815@1|root,COG0815@2|Bacteria,4NG4X@976|Bacteroidetes,1IQGK@117747|Sphingobacteriia	976|Bacteroidetes	M	apolipoprotein N-acyltransferase	lnt	-	-	ko:K03820	-	-	-	-	ko00000,ko01000	-	GT2	-	CN_hydrolase
BYD3_k127_4909515_52	1237149.C900_01733	5.829e-104	344.0	COG0483@1|root,COG0483@2|Bacteria,4NI6D@976|Bacteroidetes,47K2K@768503|Cytophagia	976|Bacteroidetes	G	Inositol monophosphatase	suhB	-	3.1.3.25	ko:K01092	ko00521,ko00562,ko01100,ko04070,map00521,map00562,map01100,map04070	M00131	R01185,R01186,R01187	RC00078	ko00000,ko00001,ko00002,ko01000	-	-	-	Inositol_P
BYD3_k127_4909515_8	29581.BW37_01453	4e-323	1013.0	COG0612@1|root,COG0612@2|Bacteria,1Q9S9@1224|Proteobacteria,2WBVP@28216|Betaproteobacteria,476J2@75682|Oxalobacteraceae	28216|Betaproteobacteria	S	Insulinase (Peptidase family M16)	pqqL	-	-	ko:K07263	-	-	-	-	ko00000,ko01000,ko01002	-	-	-	Peptidase_M16,Peptidase_M16_C
BYD3_k127_4909515_7	1237149.C900_04468	0.0	1020.0	COG0449@1|root,COG0449@2|Bacteria,4NE8Q@976|Bacteroidetes,47KVG@768503|Cytophagia	976|Bacteroidetes	M	Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source	glmS	GO:0003674,GO:0003824,GO:0004360,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006002,GO:0006040,GO:0006047,GO:0006139,GO:0006464,GO:0006486,GO:0006487,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008483,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009225,GO:0009987,GO:0016740,GO:0016769,GO:0019538,GO:0019637,GO:0034641,GO:0034645,GO:0036211,GO:0043170,GO:0043412,GO:0043413,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0055086,GO:0070085,GO:0070548,GO:0071704,GO:1901135,GO:1901137,GO:1901360,GO:1901564,GO:1901566,GO:1901576	2.6.1.16	ko:K00820	ko00250,ko00520,ko01100,ko01130,ko04931,map00250,map00520,map01100,map01130,map04931	-	R00768	RC00010,RC00163,RC02752	ko00000,ko00001,ko01000,ko01002	-	-	-	GATase_6,SIS
BYD3_k127_4909515_124	1131812.JQMS01000001_gene1402	3.079e-19	102.0	28J4T@1|root,2Z90P@2|Bacteria,4NHUC@976|Bacteroidetes,1HZE4@117743|Flavobacteriia,2NUFS@237|Flavobacterium	976|Bacteroidetes	S	Domain of unknown function (DUF4270)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4270
BYD3_k127_4909515_38	1237149.C900_04466	2.414e-140	450.0	COG0297@1|root,COG0297@2|Bacteria,4NFP8@976|Bacteroidetes,47KUD@768503|Cytophagia	976|Bacteroidetes	G	PFAM Starch synthase catalytic domain	glgA	-	2.4.1.21	ko:K00703	ko00500,ko01100,ko01110,ko02026,map00500,map01100,map01110,map02026	M00565	R02421	RC00005	ko00000,ko00001,ko00002,ko01000,ko01003	-	GT5	-	Glyco_transf_5
BYD3_k127_4909515_61	1237149.C900_04465	5.246e-89	302.0	COG0414@1|root,COG0414@2|Bacteria,4NFT9@976|Bacteroidetes,47MNB@768503|Cytophagia	976|Bacteroidetes	H	Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate	panC	GO:0003674,GO:0003824,GO:0004592,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006573,GO:0006575,GO:0006732,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009081,GO:0009108,GO:0009110,GO:0009987,GO:0015939,GO:0015940,GO:0016053,GO:0016874,GO:0016879,GO:0016881,GO:0019752,GO:0032787,GO:0033317,GO:0034641,GO:0042364,GO:0042398,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0051186,GO:0051188,GO:0071704,GO:0072330,GO:1901564,GO:1901566,GO:1901576,GO:1901605	6.3.2.1	ko:K01918	ko00410,ko00770,ko01100,ko01110,map00410,map00770,map01100,map01110	M00119	R02473	RC00096,RC00141	ko00000,ko00001,ko00002,ko01000	-	-	-	Pantoate_ligase
BYD3_k127_4909515_95	1237149.C900_04464	3.533e-56	197.0	COG0853@1|root,COG0853@2|Bacteria,4NQ42@976|Bacteroidetes,47QA8@768503|Cytophagia	976|Bacteroidetes	H	Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine	panD	-	4.1.1.11	ko:K01579	ko00410,ko00770,ko01100,ko01110,map00410,map00770,map01100,map01110	M00119	R00489	RC00299	ko00000,ko00001,ko00002,ko01000	-	-	-	Asp_decarbox
BYD3_k127_4909515_69	1237149.C900_04463	2.604e-81	282.0	COG0392@1|root,COG0392@2|Bacteria,4NGPD@976|Bacteroidetes,47JZY@768503|Cytophagia	976|Bacteroidetes	S	PFAM Uncharacterised protein family (UPF0104)	-	-	-	ko:K07027	-	-	-	-	ko00000,ko02000	4.D.2	-	-	LPG_synthase_TM
BYD3_k127_4909515_71	1237149.C900_01023	1.066e-80	277.0	COG0382@1|root,COG0382@2|Bacteria,4NGNA@976|Bacteroidetes,47MCK@768503|Cytophagia	976|Bacteroidetes	H	PFAM UbiA prenyltransferase	ubiA	-	2.5.1.39	ko:K03179	ko00130,ko01100,ko01110,map00130,map01100,map01110	M00117	R05000,R05615	RC00209,RC02895	ko00000,ko00001,ko00002,ko01000,ko01006	-	-	-	UbiA
BYD3_k127_4909515_93	1237149.C900_01024	3.701e-61	217.0	COG0299@1|root,COG0299@2|Bacteria,4NNZP@976|Bacteroidetes,47KTP@768503|Cytophagia	976|Bacteroidetes	F	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate	purN	-	2.1.2.2	ko:K11175	ko00230,ko00670,ko01100,ko01110,ko01130,map00230,map00670,map01100,map01110,map01130	M00048	R04325,R04326	RC00026,RC00197,RC01128	ko00000,ko00001,ko00002,ko01000	-	-	-	Formyl_trans_N
BYD3_k127_4909515_105	1250232.JQNJ01000001_gene2944	5.705e-46	175.0	COG0463@1|root,COG0463@2|Bacteria,4NX3Y@976|Bacteroidetes	976|Bacteroidetes	M	Glycosyl transferase family 2	-	-	-	-	-	-	-	-	-	-	-	-	Glycos_transf_2,Methyltransf_24
BYD3_k127_4909515_18	1237149.C900_01742	1.07e-228	719.0	COG0793@1|root,COG0793@2|Bacteria,4NEGV@976|Bacteroidetes,47JP7@768503|Cytophagia	976|Bacteroidetes	M	Belongs to the peptidase S41A family	ctp	-	3.4.21.102	ko:K03797	-	-	-	-	ko00000,ko01000,ko01002	-	-	-	PDZ_2,Peptidase_S41
BYD3_k127_4909515_60	1237149.C900_01741	9.961e-90	302.0	COG2846@1|root,COG2846@2|Bacteria,4NPQ7@976|Bacteroidetes,47PY2@768503|Cytophagia	976|Bacteroidetes	D	Di-iron-containing protein involved in the repair of iron-sulfur clusters	-	-	-	ko:K07322	-	-	-	-	ko00000	-	-	-	Hemerythrin
BYD3_k127_4909515_106	761193.Runsl_1328	1.189e-45	171.0	COG0262@1|root,COG0262@2|Bacteria,4NJIQ@976|Bacteroidetes,47PHT@768503|Cytophagia	976|Bacteroidetes	H	RibD C-terminal domain	-	-	1.5.1.3	ko:K00287	ko00670,ko00790,ko01100,ko01523,map00670,map00790,map01100,map01523	M00126,M00840	R00936,R00937,R00939,R00940,R02235,R02236,R11765	RC00109,RC00110,RC00158	ko00000,ko00001,ko00002,ko01000	-	-	-	RibD_C
BYD3_k127_4909515_129	926556.Echvi_4189	2.366e-12	72.0	COG2963@1|root,COG2963@2|Bacteria,4NP72@976|Bacteroidetes	976|Bacteroidetes	L	Transposase	-	-	-	-	-	-	-	-	-	-	-	-	HTH_Tnp_1
BYD3_k127_4909515_76	1348583.ATLH01000013_gene2724	2.273e-76	265.0	COG2801@1|root,COG2801@2|Bacteria,4NM64@976|Bacteroidetes,1HZ28@117743|Flavobacteriia,1FADJ@104264|Cellulophaga	976|Bacteroidetes	L	COGs COG2801 Transposase and inactivated derivatives	-	-	-	-	-	-	-	-	-	-	-	-	rve
BYD3_k127_4909515_107	1124780.ANNU01000069_gene1076	3.603e-45	167.0	COG0816@1|root,COG0816@2|Bacteria,4NQ8B@976|Bacteroidetes,47QCM@768503|Cytophagia	976|Bacteroidetes	L	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA	ruvX	GO:0000966,GO:0000967,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0022613,GO:0034470,GO:0034471,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:1901360	-	ko:K07447	-	-	-	-	ko00000,ko01000	-	-	-	RuvX
BYD3_k127_4909515_74	1237149.C900_01739	5.961e-78	264.0	COG0242@1|root,COG0242@2|Bacteria,4NFB4@976|Bacteroidetes,47JIG@768503|Cytophagia	976|Bacteroidetes	J	Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions	def	-	3.5.1.88	ko:K01462	-	-	-	-	ko00000,ko01000	-	-	-	Pep_deformylase
BYD3_k127_4909515_117	391596.PBAL39_02447	4.95e-31	126.0	2CH3Z@1|root,32RP9@2|Bacteria,4NQUA@976|Bacteroidetes,1IU8M@117747|Sphingobacteriia	976|Bacteroidetes	S	Protein of unknown function (DUF2721)	-	-	-	-	-	-	-	-	-	-	-	-	DUF2721
BYD3_k127_4909515_39	153721.MYP_4138	1.838e-139	454.0	COG2270@1|root,COG2270@2|Bacteria,4PKPY@976|Bacteroidetes	976|Bacteroidetes	S	Transmembrane secretion effector	-	-	-	-	-	-	-	-	-	-	-	-	MFS_3
BYD3_k127_4909515_94	485918.Cpin_0719	1.384e-59	211.0	COG3172@1|root,COG3172@2|Bacteria,4NFNZ@976|Bacteroidetes,1ISIF@117747|Sphingobacteriia	976|Bacteroidetes	H	ATPase kinase involved in NAD metabolism	nadR	-	-	-	-	-	-	-	-	-	-	-	AAA_28
BYD3_k127_4909515_86	313606.M23134_02140	1.015e-68	252.0	COG1231@1|root,COG1231@2|Bacteria,4NP86@976|Bacteroidetes,47PVH@768503|Cytophagia	976|Bacteroidetes	E	Flavin containing amine oxidoreductase	-	-	-	-	-	-	-	-	-	-	-	-	Amino_oxidase
BYD3_k127_4909515_75	1392490.JHZX01000001_gene2961	2.446e-77	267.0	COG0730@1|root,COG0730@2|Bacteria,4NFWP@976|Bacteroidetes,1HWSW@117743|Flavobacteriia	976|Bacteroidetes	S	membrane transporter protein	-	-	-	ko:K07090	-	-	-	-	ko00000	-	-	-	TauE
BYD3_k127_4909515_82	643867.Ftrac_1853	3.209e-71	248.0	COG0797@1|root,COG0797@2|Bacteria,4NSF1@976|Bacteroidetes,47RE3@768503|Cytophagia	976|Bacteroidetes	M	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides	rlpA	-	-	ko:K03642	-	-	-	-	ko00000	-	-	-	DPBB_1,SPOR
BYD3_k127_4909515_16	1237149.C900_03138	2.121e-238	748.0	COG0516@1|root,COG0517@1|root,COG0516@2|Bacteria,COG0517@2|Bacteria,4NDXQ@976|Bacteroidetes,47KQV@768503|Cytophagia	976|Bacteroidetes	F	Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth	guaB	-	1.1.1.205	ko:K00088	ko00230,ko00983,ko01100,ko01110,map00230,map00983,map01100,map01110	M00050	R01130,R08240	RC00143,RC02207	ko00000,ko00001,ko00002,ko01000,ko04147	-	-	-	CBS,IMPDH
BYD3_k127_4909515_13	1237149.C900_03128	4.006e-255	805.0	COG2208@1|root,COG2208@2|Bacteria,4NJMJ@976|Bacteroidetes,47JNJ@768503|Cytophagia	976|Bacteroidetes	KT	PFAM Stage II sporulation protein E (SpoIIE)	-	-	-	-	-	-	-	-	-	-	-	-	GAF_2,SpoIIE
BYD3_k127_4909515_113	1237149.C900_03127	1.092e-37	144.0	COG1366@1|root,COG1366@2|Bacteria,4NVHQ@976|Bacteroidetes,47RVX@768503|Cytophagia	976|Bacteroidetes	T	Belongs to the anti-sigma-factor antagonist family	-	-	-	ko:K04749	-	-	-	-	ko00000,ko03021	-	-	-	STAS
BYD3_k127_4909515_116	1121904.ARBP01000012_gene1187	1.032e-34	137.0	COG2172@1|root,COG2172@2|Bacteria,4NV3J@976|Bacteroidetes,47RU2@768503|Cytophagia	976|Bacteroidetes	T	PFAM Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase	-	-	2.7.11.1	ko:K04757	-	-	-	-	ko00000,ko01000,ko01001,ko03021	-	-	-	HATPase_c_2
BYD3_k127_4909515_26	1237149.C900_03125	1.338e-166	545.0	COG0760@1|root,COG0760@2|Bacteria,4NGIR@976|Bacteroidetes,47K78@768503|Cytophagia	976|Bacteroidetes	O	peptidyl-prolyl isomerase	-	-	5.2.1.8	ko:K03771	-	-	-	-	ko00000,ko01000,ko03110	-	-	-	Rotamase,Rotamase_2,Rotamase_3
BYD3_k127_4909515_50	1237149.C900_03124	1.566e-104	347.0	COG0760@1|root,COG0760@2|Bacteria,4NG2P@976|Bacteroidetes,47NE3@768503|Cytophagia	976|Bacteroidetes	O	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation	-	-	-	-	-	-	-	-	-	-	-	-	Rotamase_2
BYD3_k127_4909515_27	1237149.C900_03123	2.765e-166	535.0	COG0760@1|root,COG0760@2|Bacteria,4NEW0@976|Bacteroidetes,47JPW@768503|Cytophagia	976|Bacteroidetes	O	peptidyl-prolyl isomerase	surA	-	5.2.1.8	ko:K03771	-	-	-	-	ko00000,ko01000,ko03110	-	-	-	Rotamase,SurA_N_3
BYD3_k127_4909515_32	1237149.C900_03122	5.426e-156	497.0	COG0714@1|root,COG0714@2|Bacteria,4NDVZ@976|Bacteroidetes,47KTK@768503|Cytophagia	976|Bacteroidetes	S	PFAM ATPase associated with various cellular activities	moxR	-	-	ko:K03924	-	-	-	-	ko00000,ko01000	-	-	-	AAA_3
BYD3_k127_4909515_5	1237149.C900_02790	0.0	1135.0	COG1138@1|root,COG1138@2|Bacteria,4NGXI@976|Bacteroidetes,47M2N@768503|Cytophagia	976|Bacteroidetes	O	PFAM Cytochrome c assembly protein	ccmF	-	-	ko:K02198	-	-	-	-	ko00000,ko02000	9.B.14.1	-	-	CcmF_C,Cytochrom_C_asm
BYD3_k127_4909515_104	1237149.C900_02791	8.542e-48	174.0	COG2332@1|root,COG2332@2|Bacteria,4NN85@976|Bacteroidetes,47PIE@768503|Cytophagia	976|Bacteroidetes	O	Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH	-	-	-	ko:K02197	-	-	-	-	ko00000	-	-	-	CcmE
BYD3_k127_4909515_132	509635.N824_17785	3.618e-08	58.0	2BZQ6@1|root,339SI@2|Bacteria,4NXJG@976|Bacteroidetes,1IU7C@117747|Sphingobacteriia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_4909515_57	1237149.C900_02793	9.179e-96	317.0	COG0755@1|root,COG0755@2|Bacteria,4NFUS@976|Bacteroidetes,47MYQ@768503|Cytophagia	976|Bacteroidetes	O	PFAM Cytochrome c assembly protein	ccmC	-	-	ko:K02195	ko02010,map02010	M00259	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.107	-	-	Cytochrom_C_asm
BYD3_k127_4909515_84	866536.Belba_0720	1.561e-69	241.0	COG2386@1|root,COG2386@2|Bacteria,4NFQV@976|Bacteroidetes,47K0P@768503|Cytophagia	976|Bacteroidetes	O	ABC-type transport system involved in cytochrome c biogenesis permease component	ccmB	-	-	ko:K02194	ko02010,map02010	M00259	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.107	-	-	CcmB
BYD3_k127_4909515_130	313606.M23134_03416	3.222e-12	76.0	2A7E3@1|root,30WBH@2|Bacteria,4P9R0@976|Bacteroidetes,47RWQ@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_4909515_31	1237149.C900_02796	1.342e-161	514.0	COG0451@1|root,COG0451@2|Bacteria,4NEKA@976|Bacteroidetes,47JU9@768503|Cytophagia	976|Bacteroidetes	M	PFAM NAD dependent epimerase dehydratase family	-	-	5.1.3.6	ko:K08679	ko00520,ko01100,map00520,map01100	-	R01385	RC00289	ko00000,ko00001,ko01000	-	-	-	Epimerase,GDP_Man_Dehyd
BYD3_k127_4909515_22	1237149.C900_02797	8.742e-205	643.0	COG0677@1|root,COG0677@2|Bacteria,4NDTW@976|Bacteroidetes,47JKM@768503|Cytophagia	976|Bacteroidetes	M	Belongs to the UDP-glucose GDP-mannose dehydrogenase family	-	-	1.1.1.136	ko:K02474,ko:K13015	ko00520,map00520	-	R00421,R06894	RC00291	ko00000,ko00001,ko01000,ko01005	-	-	-	UDPG_MGDP_dh,UDPG_MGDP_dh_C,UDPG_MGDP_dh_N
BYD3_k127_4909515_45	1279009.ADICEAN_01106	8.795e-124	405.0	COG1087@1|root,COG1087@2|Bacteria,4NEM9@976|Bacteroidetes,47JM5@768503|Cytophagia	976|Bacteroidetes	M	PFAM NAD dependent epimerase dehydratase family	galE	-	5.1.3.2	ko:K01784	ko00052,ko00520,ko01100,map00052,map00520,map01100	M00361,M00362,M00632	R00291,R02984	RC00289	ko00000,ko00001,ko00002,ko01000	-	-	-	Epimerase,GDP_Man_Dehyd
BYD3_k127_4909515_34	1121129.KB903360_gene3628	6.151e-154	496.0	COG0399@1|root,COG0399@2|Bacteria,4NEBI@976|Bacteroidetes,2FPAJ@200643|Bacteroidia,22WTH@171551|Porphyromonadaceae	976|Bacteroidetes	E	Belongs to the DegT DnrJ EryC1 family	degT	-	-	-	-	-	-	-	-	-	-	-	DegT_DnrJ_EryC1
BYD3_k127_4940835_36	504472.Slin_5653	3.174e-45	171.0	COG4888@1|root,COG4888@2|Bacteria,4NEE8@976|Bacteroidetes,47JJ5@768503|Cytophagia	976|Bacteroidetes	S	ASPIC and UnbV	-	-	-	-	-	-	-	-	-	-	-	-	UnbV_ASPIC,VCBS
BYD3_k127_4940835_12	1288963.ADIS_3856	1.718e-153	490.0	COG0657@1|root,COG0657@2|Bacteria,4PKKH@976|Bacteroidetes,47P2Y@768503|Cytophagia	976|Bacteroidetes	I	alpha/beta hydrolase fold	-	-	-	-	-	-	-	-	-	-	-	-	Abhydrolase_3
BYD3_k127_4940835_22	925409.KI911562_gene241	5.111e-90	301.0	COG1051@1|root,COG1051@2|Bacteria,4NH28@976|Bacteroidetes,1IP93@117747|Sphingobacteriia	976|Bacteroidetes	F	Nudix hydrolase	-	-	-	-	-	-	-	-	-	-	-	-	NUDIX
BYD3_k127_4940835_8	1121904.ARBP01000002_gene7252	4.61e-218	703.0	COG0577@1|root,COG0577@2|Bacteria,4NDUK@976|Bacteroidetes,47JJN@768503|Cytophagia	976|Bacteroidetes	V	FtsX-like permease family	-	-	-	ko:K02004	-	M00258	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	FtsX,MacB_PCD
BYD3_k127_4940835_10	1237149.C900_05801	2.502e-197	625.0	COG0486@1|root,COG0486@2|Bacteria,4NECT@976|Bacteroidetes,47JRR@768503|Cytophagia	976|Bacteroidetes	S	Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34	mnmE	-	-	ko:K03650	-	-	R08701	RC00053,RC00209,RC00870	ko00000,ko01000,ko03016	-	-	-	MMR_HSR1,MnmE_helical,TrmE_N
BYD3_k127_4940835_5	1341181.FLJC2902T_03730	6.708e-254	797.0	COG0589@1|root,COG1914@1|root,COG0589@2|Bacteria,COG1914@2|Bacteria,4NENE@976|Bacteroidetes,1HXXF@117743|Flavobacteriia,2NTC3@237|Flavobacterium	976|Bacteroidetes	PT	H( )-stimulated, divalent metal cation uptake system	mntH	-	-	ko:K03322	-	-	-	-	ko00000,ko02000	2.A.55.2.6,2.A.55.3	-	-	Nramp,Usp
BYD3_k127_4940835_30	1237149.C900_05811	5.396e-75	258.0	COG1321@1|root,COG1321@2|Bacteria,4NGUP@976|Bacteroidetes,47JSQ@768503|Cytophagia	976|Bacteroidetes	K	Iron dependent repressor, metal binding and dimerisation domain	-	-	-	ko:K03709	-	-	-	-	ko00000,ko03000	-	-	-	Fe_dep_repr_C,Fe_dep_repress,FeoA
BYD3_k127_4940835_25	1237149.C900_05813	8.574e-88	302.0	COG0438@1|root,COG0438@2|Bacteria,4NMMT@976|Bacteroidetes,47PDF@768503|Cytophagia	976|Bacteroidetes	M	PFAM Glycosyl transferases group 1	-	-	-	-	-	-	-	-	-	-	-	-	Glyco_trans_1_4,Glycos_transf_1
BYD3_k127_4940835_15	1233951.IO90_12600	1.838e-140	450.0	COG2171@1|root,COG2171@2|Bacteria,4NEWD@976|Bacteroidetes,1HWTI@117743|Flavobacteriia,3HH92@358033|Chryseobacterium	976|Bacteroidetes	E	Belongs to the transferase hexapeptide repeat family	dapD	-	2.3.1.117	ko:K00674	ko00300,ko01100,ko01120,ko01230,map00300,map01100,map01120,map01230	M00016	R04365	RC00004,RC01136	ko00000,ko00001,ko00002,ko01000	-	-	-	Hexapep,Hexapep_2,THDPS_N_2
BYD3_k127_4940835_21	1237149.C900_05815	5.629e-96	321.0	2DBU8@1|root,2ZB4S@2|Bacteria,4PKQU@976|Bacteroidetes,47Y2Z@768503|Cytophagia	976|Bacteroidetes	S	Protein of unknown function (DUF3108)	-	-	-	-	-	-	-	-	-	-	-	-	DUF3108
BYD3_k127_4940835_45	926562.Oweho_1017	4.873e-33	132.0	COG0784@1|root,COG0784@2|Bacteria,4NUT5@976|Bacteroidetes,1IBHY@117743|Flavobacteriia	976|Bacteroidetes	T	response regulator, receiver	-	-	-	-	-	-	-	-	-	-	-	-	Response_reg
BYD3_k127_4940835_23	1004149.AFOE01000042_gene2736	9.215e-90	324.0	COG2202@1|root,COG4251@1|root,COG2202@2|Bacteria,COG4251@2|Bacteria,4NFC3@976|Bacteroidetes,1HWUK@117743|Flavobacteriia	976|Bacteroidetes	T	Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase	-	-	-	-	-	-	-	-	-	-	-	-	HATPase_c,PAS,PAS_3,PAS_4,PAS_9
BYD3_k127_4940835_34	925409.KI911562_gene1449	3.504e-51	184.0	COG1970@1|root,COG1970@2|Bacteria,4NQ49@976|Bacteroidetes,1ISTF@117747|Sphingobacteriia	976|Bacteroidetes	M	Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell	mscL	-	-	ko:K03282	-	-	-	-	ko00000,ko02000	1.A.22.1	-	-	MscL
BYD3_k127_4940835_17	1237149.C900_05818	5.556e-132	426.0	COG1250@1|root,COG1250@2|Bacteria,4NGU8@976|Bacteroidetes,47NRU@768503|Cytophagia	976|Bacteroidetes	I	3-hydroxyacyl-CoA dehydrogenase, C-terminal domain	hbd	-	1.1.1.157	ko:K00074	ko00360,ko00362,ko00650,ko01100,ko01120,map00360,map00362,map00650,map01100,map01120	-	R01976,R05576,R06941	RC00029,RC00117	ko00000,ko00001,ko01000	-	-	-	3HCDH,3HCDH_N
BYD3_k127_4940835_52	1123057.P872_04640	2.337e-16	84.0	2C5P8@1|root,32U6D@2|Bacteria,4NSY7@976|Bacteroidetes,47R86@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_4940835_13	1237149.C900_05825	6.251e-150	484.0	COG3000@1|root,COG3000@2|Bacteria,4NFWX@976|Bacteroidetes,47KXY@768503|Cytophagia	976|Bacteroidetes	I	PFAM Fatty acid hydroxylase	-	-	-	-	-	-	-	-	-	-	-	-	FA_hydroxylase
BYD3_k127_4940835_2	1237149.C900_05827	4.544e-316	977.0	COG0187@1|root,COG0187@2|Bacteria,4NF18@976|Bacteroidetes,47JS9@768503|Cytophagia	976|Bacteroidetes	L	Type IIA topoisomerase (DNA gyrase topo II topoisomerase IV) B subunit	parE	-	-	ko:K02622	-	-	-	-	ko00000,ko01000,ko02048,ko03032,ko03036	-	-	-	DNA_gyraseB,DNA_gyraseB_C,HATPase_c,Toprim
BYD3_k127_4940835_0	1237149.C900_05830	0.0	1227.0	COG0188@1|root,COG0188@2|Bacteria,4NERI@976|Bacteroidetes,47JQZ@768503|Cytophagia	976|Bacteroidetes	L	Belongs to the type II topoisomerase GyrA ParC subunit family	parC	-	-	ko:K02621	-	-	-	-	ko00000,ko01000,ko02048,ko03032,ko03036	-	-	-	DNA_topoisoIV
BYD3_k127_4940835_39	1237149.C900_00748	2.135e-42	163.0	COG2885@1|root,COG2885@2|Bacteria,4NEND@976|Bacteroidetes,47KG7@768503|Cytophagia	976|Bacteroidetes	M	Belongs to the ompA family	-	-	-	-	-	-	-	-	-	-	-	-	CarboxypepD_reg,OmpA,PD40,RicinB_lectin_2
BYD3_k127_4940835_16	1185876.BN8_06214	8.59e-136	441.0	COG2706@1|root,COG2706@2|Bacteria,4NE87@976|Bacteroidetes,47KQB@768503|Cytophagia	976|Bacteroidetes	G	PFAM 3-carboxy-cis,cis-muconate lactonizing enzyme	-	-	3.1.1.31	ko:K07404	ko00030,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map01100,map01110,map01120,map01130,map01200	M00004,M00006,M00008	R02035	RC00537	ko00000,ko00001,ko00002,ko01000	-	-	-	Lactonase
BYD3_k127_4940835_19	1122176.KB903538_gene1574	1.033e-117	391.0	COG2723@1|root,COG2723@2|Bacteria,4NEE2@976|Bacteroidetes	2|Bacteria	G	beta-glucosidase	bglB	-	3.2.1.21	ko:K05350	ko00460,ko00500,ko00940,ko01100,ko01110,map00460,map00500,map00940,map01100,map01110	-	R00026,R02558,R02887,R02985,R03527,R04949,R04998,R10035,R10039,R10040	RC00049,RC00059,RC00171,RC00262,RC00397,RC00451,RC00714,RC00746,RC01248	ko00000,ko00001,ko01000	-	-	-	Glyco_hydro_1
BYD3_k127_4940835_54	1196029.ALIM01000014_gene3381	7.253e-15	85.0	COG1876@1|root,COG3409@1|root,COG1876@2|Bacteria,COG3409@2|Bacteria,1VC9C@1239|Firmicutes,4HNA4@91061|Bacilli,1ZGE1@1386|Bacillus	91061|Bacilli	M	D-alanyl-D-alanine carboxypeptidase	-	-	-	ko:K17733	-	-	-	-	ko00000,ko01000,ko01002,ko01011	-	-	-	PG_binding_1,Peptidase_M15_4
BYD3_k127_4940835_49	1121904.ARBP01000002_gene7268	1.486e-23	106.0	2BZCX@1|root,33XUD@2|Bacteria,4P3BB@976|Bacteroidetes,47V4G@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_4940835_26	1191523.MROS_2252	1.008e-87	304.0	COG3104@1|root,COG3104@2|Bacteria	2|Bacteria	E	oligopeptide transport	-	-	-	ko:K03305	-	-	-	-	ko00000	2.A.17	-	-	MFS_1,PTR2
BYD3_k127_4940835_3	1123248.KB893323_gene1631	2.18e-295	919.0	COG1297@1|root,COG1297@2|Bacteria,4NEIY@976|Bacteroidetes,1IP8J@117747|Sphingobacteriia	976|Bacteroidetes	S	OPT oligopeptide transporter protein	-	-	-	-	-	-	-	-	-	-	-	-	OPT
BYD3_k127_4940835_4	1237149.C900_05125	5.848e-277	859.0	COG0459@1|root,COG0459@2|Bacteria,4NDZM@976|Bacteroidetes,47JYW@768503|Cytophagia	976|Bacteroidetes	O	Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions	groL	GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006457,GO:0006458,GO:0008150,GO:0009987,GO:0016465,GO:0032991,GO:0044183,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0051082,GO:0061077,GO:0101031,GO:1990220	-	ko:K04077	ko03018,ko04212,ko04940,ko05134,ko05152,map03018,map04212,map04940,map05134,map05152	-	-	-	ko00000,ko00001,ko03019,ko03029,ko03110,ko04147	-	-	-	Cpn60_TCP1
BYD3_k127_4940835_40	643867.Ftrac_0860	5.853e-40	149.0	COG0234@1|root,COG0234@2|Bacteria,4NS7D@976|Bacteroidetes,47QCW@768503|Cytophagia	976|Bacteroidetes	O	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter	groS	GO:0003674,GO:0005488,GO:0005515,GO:0006457,GO:0006458,GO:0006950,GO:0006986,GO:0008150,GO:0009987,GO:0010033,GO:0035966,GO:0042221,GO:0043167,GO:0043169,GO:0046872,GO:0050896,GO:0051082,GO:0051084,GO:0051085,GO:0051087,GO:0061077	-	ko:K04078	-	-	-	-	ko00000,ko03029,ko03110	-	-	-	Cpn10
BYD3_k127_4940835_28	1237149.C900_05123	1.452e-85	289.0	28KKN@1|root,2ZA5E@2|Bacteria,4NMKH@976|Bacteroidetes,47PT5@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_4940835_46	1237149.C900_05122	2.472e-30	123.0	COG1314@1|root,COG1314@2|Bacteria,4NUYQ@976|Bacteroidetes,47SC6@768503|Cytophagia	976|Bacteroidetes	U	PFAM Preprotein translocase SecG subunit	secG	-	-	ko:K03075	ko02024,ko03060,ko03070,map02024,map03060,map03070	M00335	-	-	ko00000,ko00001,ko00002,ko02044	3.A.5.1,3.A.5.2	-	-	SecG
BYD3_k127_4940835_48	1237149.C900_05121	4.508e-25	116.0	2ECXC@1|root,336UI@2|Bacteria,4NV8T@976|Bacteroidetes,47RWP@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_4940835_42	1237149.C900_05120	1.321e-36	146.0	2CADI@1|root,32RR7@2|Bacteria,4NP51@976|Bacteroidetes,47P8C@768503|Cytophagia	976|Bacteroidetes	S	Lipopolysaccharide-assembly	lptE	-	-	-	-	-	-	-	-	-	-	-	LptE
BYD3_k127_4940835_9	1237149.C900_05119	1.654e-200	631.0	COG2204@1|root,COG2204@2|Bacteria,4NDWI@976|Bacteroidetes,47JXW@768503|Cytophagia	976|Bacteroidetes	K	sigma54 specific, transcriptional regulator, Fis family	fhlA	-	-	-	-	-	-	-	-	-	-	-	HTH_8,Sigma54_activat
BYD3_k127_4940835_7	1237149.C900_05118	1.975e-226	710.0	COG0621@1|root,COG0621@2|Bacteria,4NDU6@976|Bacteroidetes,47MGS@768503|Cytophagia	976|Bacteroidetes	J	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine	miaB	-	2.8.4.3	ko:K06168	-	-	R10645,R10646,R10647	RC00003,RC00980,RC03221,RC03222	ko00000,ko01000,ko03016	-	-	-	Radical_SAM,TRAM,UPF0004
BYD3_k127_4940835_29	1239962.C943_04432	3.485e-81	273.0	COG0663@1|root,COG0663@2|Bacteria,4NG6R@976|Bacteroidetes,47PIB@768503|Cytophagia	976|Bacteroidetes	S	carbonic anhydrase acetyltransferase	dapH	-	-	-	-	-	-	-	-	-	-	-	Hexapep
BYD3_k127_4940835_31	1237149.C900_05111	1.059e-67	235.0	28Q4Y@1|root,2ZCN1@2|Bacteria,4NRPX@976|Bacteroidetes,47P9K@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_4940835_33	1237149.C900_05109	4.086e-52	191.0	COG2825@1|root,COG2825@2|Bacteria,4NQGG@976|Bacteroidetes,47MRT@768503|Cytophagia	976|Bacteroidetes	M	PFAM Outer membrane chaperone Skp (OmpH)	-	-	-	ko:K06142	-	-	-	-	ko00000	-	-	-	OmpH
BYD3_k127_4940835_1	1237149.C900_05108	0.0	1040.0	COG1413@1|root,COG1413@2|Bacteria,4PKPI@976|Bacteroidetes,47NQS@768503|Cytophagia	976|Bacteroidetes	C	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein	-	-	-	-	-	-	-	-	-	-	-	-	HEAT_2,cNMP_binding
BYD3_k127_4940835_56	1120968.AUBX01000009_gene568	1.596e-09	60.0	2DDKA@1|root,2ZIEQ@2|Bacteria,4P85D@976|Bacteroidetes	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_4940835_50	1237149.C900_01969	3.485e-21	97.0	COG3291@1|root,COG3291@2|Bacteria,4NV3K@976|Bacteroidetes,47W7K@768503|Cytophagia	976|Bacteroidetes	C	Pkd domain containing protein	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_4940835_35	926556.Echvi_2894	7.502e-49	180.0	COG2353@1|root,COG2353@2|Bacteria,4NSJH@976|Bacteroidetes,47QHY@768503|Cytophagia	976|Bacteroidetes	S	Belongs to the UPF0312 family	-	-	-	-	-	-	-	-	-	-	-	-	YceI
BYD3_k127_4940835_37	1237149.C900_01970	6.464e-44	166.0	COG2353@1|root,COG2353@2|Bacteria,4NSJH@976|Bacteroidetes,47QHY@768503|Cytophagia	976|Bacteroidetes	S	Belongs to the UPF0312 family	-	-	-	-	-	-	-	-	-	-	-	-	YceI
BYD3_k127_4940835_27	1237149.C900_01971	1.098e-85	292.0	COG3637@1|root,COG3637@2|Bacteria,4NE33@976|Bacteroidetes,47NZ9@768503|Cytophagia	976|Bacteroidetes	M	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_4940835_14	1239962.C943_02211	8.907e-150	486.0	COG0591@1|root,COG0591@2|Bacteria,4NH7H@976|Bacteroidetes,47JA4@768503|Cytophagia	976|Bacteroidetes	E	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family	-	-	-	ko:K03307,ko:K14387	ko04725,ko05231,map04725,map05231	-	-	-	ko00000,ko00001,ko02000	2.A.21,2.A.21.8	-	-	HD_4,SSF
BYD3_k127_4940835_44	929713.NIASO_06790	8.948e-35	137.0	COG1765@1|root,COG1765@2|Bacteria,4NNTY@976|Bacteroidetes,1IT1R@117747|Sphingobacteriia	976|Bacteroidetes	O	redox protein regulator of disulfide bond formation	-	-	-	ko:K07397	-	-	-	-	ko00000	-	-	-	OsmC
BYD3_k127_4940835_11	1237149.C900_05467	1.654e-190	601.0	COG0626@1|root,COG0626@2|Bacteria,4PKE6@976|Bacteroidetes,47KC8@768503|Cytophagia	976|Bacteroidetes	E	Catalyzes the formation of L-homocysteine from O- succinyl-L-homoserine (OSHS) and hydrogen sulfide	metZ	-	-	ko:K10764	ko00270,ko00920,ko01100,map00270,map00920,map01100	-	R01288	RC00020,RC02848	ko00000,ko00001,ko01000	-	-	-	Cys_Met_Meta_PP
BYD3_k127_4940835_38	1237149.C900_01348	3.472e-43	159.0	COG0476@1|root,COG0476@2|Bacteria,4NFUD@976|Bacteroidetes,47KG8@768503|Cytophagia	976|Bacteroidetes	H	MoeZ MoeB domain	moeZ	-	2.7.7.80,2.8.1.11	ko:K21029,ko:K21147	ko04122,map04122	-	R07459,R07461	RC00043	ko00000,ko00001,ko01000	-	-	-	Rhodanese,ThiF
BYD3_k127_4940835_24	1237149.C900_03711	9.944e-90	305.0	COG0121@1|root,COG0121@2|Bacteria	2|Bacteria	S	cellular modified histidine biosynthetic process	egtC	-	-	ko:K18802	-	-	-	-	ko00000	-	-	-	GATase_4
BYD3_k127_4940835_32	1237149.C900_01352	2.544e-58	208.0	COG0229@1|root,COG0229@2|Bacteria,4NQEY@976|Bacteroidetes,47PZ4@768503|Cytophagia	976|Bacteroidetes	O	peptide methionine sulfoxide reductase	msrB	-	1.8.4.12	ko:K07305	-	-	-	-	ko00000,ko01000	-	-	-	SelR
BYD3_k127_4940835_43	1124780.ANNU01000015_gene1999	3.983e-35	142.0	2E3CB@1|root,32YBM@2|Bacteria,4NU80@976|Bacteroidetes,47Y2T@768503|Cytophagia	976|Bacteroidetes	S	Domain of unknown function (DUF4154)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4154
BYD3_k127_4940835_6	1237149.C900_01354	1.223e-250	788.0	COG2203@1|root,COG2203@2|Bacteria,4NICW@976|Bacteroidetes,47NI3@768503|Cytophagia	976|Bacteroidetes	T	Domain present in phytochromes and cGMP-specific phosphodiesterases.	-	-	-	-	-	-	-	-	-	-	-	-	GAF_2,PAS_9
BYD3_k127_4940835_20	1237149.C900_05060	3.238e-108	354.0	COG2884@1|root,COG2884@2|Bacteria,4NEP2@976|Bacteroidetes,47MP4@768503|Cytophagia	976|Bacteroidetes	D	PFAM ABC transporter	ftsE	-	-	ko:K09812	ko02010,map02010	M00256	-	-	ko00000,ko00001,ko00002,ko02000,ko03036	3.A.1.140	-	-	ABC_tran
BYD3_k127_4940835_18	1279009.ADICEAN_03209	1.827e-120	389.0	COG0176@1|root,COG0176@2|Bacteria,4NFVZ@976|Bacteroidetes,47JX6@768503|Cytophagia	976|Bacteroidetes	G	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway	tal	-	2.2.1.2	ko:K00616,ko:K08314	ko00030,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map01100,map01110,map01120,map01130,map01200,map01230	M00004,M00007	R01827	RC00439,RC00604	ko00000,ko00001,ko00002,ko01000	-	-	-	TAL_FSA
BYD3_k127_4940835_47	1144343.PMI41_00509	4.291e-30	126.0	COG1670@1|root,COG1670@2|Bacteria,1RABT@1224|Proteobacteria,2U6PR@28211|Alphaproteobacteria	28211|Alphaproteobacteria	J	Acetyltransferases, including N-acetylases of ribosomal proteins	-	-	-	-	-	-	-	-	-	-	-	-	Acetyltransf_3
BYD3_k127_4940835_41	388413.ALPR1_17093	5.663e-39	153.0	COG1595@1|root,COG1595@2|Bacteria,4NMEC@976|Bacteroidetes,47PHA@768503|Cytophagia	976|Bacteroidetes	K	Sigma-70, region 4	-	-	-	-	-	-	-	-	-	-	-	-	Sigma70_r2,Sigma70_r4,Sigma70_r4_2
BYD3_k127_4940835_55	1121859.KB890755_gene1165	2.633e-13	73.0	COG3712@1|root,COG3712@2|Bacteria,4P19K@976|Bacteroidetes	976|Bacteroidetes	PT	Domain of unknown function (DUF4974)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4974,FecR
BYD3_k127_4941100_4	1237149.C900_00383	2.235e-07	59.0	COG0086@1|root,COG0086@2|Bacteria,4NG2I@976|Bacteroidetes,47Y4X@768503|Cytophagia	976|Bacteroidetes	K	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates	-	-	-	-	-	-	-	-	-	-	-	-	OMP_b-brl_2
BYD3_k127_4941100_5	1123057.P872_02340	1.81e-05	55.0	2EG8W@1|root,33A0P@2|Bacteria,4NXXY@976|Bacteroidetes,47T68@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_4941100_2	1237149.C900_00381	1.908e-68	237.0	COG1595@1|root,COG1595@2|Bacteria,4NQCH@976|Bacteroidetes,47PTY@768503|Cytophagia	976|Bacteroidetes	K	TIGRFAM RNA polymerase sigma factor, sigma-70 family	-	-	-	ko:K03088	-	-	-	-	ko00000,ko03021	-	-	-	Sigma70_r2,Sigma70_r4_2
BYD3_k127_4941100_1	1237149.C900_05629	1.961e-214	691.0	COG1983@1|root,COG1983@2|Bacteria,4NG3T@976|Bacteroidetes,47M43@768503|Cytophagia	976|Bacteroidetes	KT	PFAM PspC domain	-	-	-	ko:K03973	-	-	-	-	ko00000,ko02048,ko03000	-	-	-	DUF2807,PspC
BYD3_k127_4941100_3	1237149.C900_05630	8.201e-51	181.0	COG1695@1|root,COG1695@2|Bacteria,4NSI4@976|Bacteroidetes,47Q8F@768503|Cytophagia	976|Bacteroidetes	K	Transcriptional regulator	-	-	-	ko:K10947	-	-	-	-	ko00000,ko03000	-	-	-	PadR
BYD3_k127_4941100_0	1237149.C900_05632	5.622e-309	974.0	COG1572@1|root,COG1572@2|Bacteria,4NFAX@976|Bacteroidetes,47K9M@768503|Cytophagia	976|Bacteroidetes	S	Peptidase family C25	-	-	-	-	-	-	-	-	-	-	-	-	CARDB,FlgD_ig,ILEI,Peptidase_C25
BYD3_k127_4950028_1	1237149.C900_01371	0.0	1236.0	COG1410@1|root,COG1410@2|Bacteria,4PKI8@976|Bacteroidetes,47XZT@768503|Cytophagia	976|Bacteroidetes	E	B12 binding domain	metH	-	2.1.1.13	ko:K00548	ko00270,ko00450,ko00670,ko01100,ko01110,ko01230,map00270,map00450,map00670,map01100,map01110,map01230	M00017	R00946,R09365	RC00035,RC00113,RC01241	ko00000,ko00001,ko00002,ko01000	-	-	-	B12-binding,B12-binding_2,DUF559,Met_synt_B12,Pterin_bind
BYD3_k127_4950028_36	1317122.ATO12_20040	5.302e-43	159.0	2AR54@1|root,31GER@2|Bacteria,4NSCR@976|Bacteroidetes,1I3DE@117743|Flavobacteriia,2YM3A@290174|Aquimarina	976|Bacteroidetes	J	30S ribosomal protein S23	-	-	-	-	-	-	-	-	-	-	-	-	23S_rRNA_IVP
BYD3_k127_4950028_15	1237149.C900_00621	1.004e-169	538.0	COG0646@1|root,COG0646@2|Bacteria,4NFRF@976|Bacteroidetes,47KPH@768503|Cytophagia	976|Bacteroidetes	E	Homocysteine S-methyltransferase	metH	-	2.1.1.13	ko:K00548	ko00270,ko00450,ko00670,ko01100,ko01110,ko01230,map00270,map00450,map00670,map01100,map01110,map01230	M00017	R00946,R09365	RC00035,RC00113,RC01241	ko00000,ko00001,ko00002,ko01000	-	-	-	B12-binding,B12-binding_2,Met_synt_B12,Pterin_bind,S-methyl_trans
BYD3_k127_4950028_20	1237149.C900_00622	6.469e-114	374.0	COG0248@1|root,COG0248@2|Bacteria,4NEI0@976|Bacteroidetes,47KHJ@768503|Cytophagia	976|Bacteroidetes	FP	PFAM Ppx GppA phosphatase	ppx	-	3.6.1.11,3.6.1.40	ko:K01524	ko00230,map00230	-	R03409	RC00002	ko00000,ko00001,ko01000	-	-	-	Ppx-GppA
BYD3_k127_4950028_26	1237149.C900_01221	4.214e-90	312.0	COG2885@1|root,COG2885@2|Bacteria	2|Bacteria	M	chlorophyll binding	-	-	-	-	-	-	-	-	-	-	-	-	PorP_SprF,SPOR
BYD3_k127_4950028_4	1237149.C900_01220	2.89e-237	770.0	COG3291@1|root,COG3291@2|Bacteria	2|Bacteria	S	metallopeptidase activity	-	-	-	-	-	-	-	-	-	-	-	-	CHU_C,IgGFc_binding,PKD,Peptidase_M43,fn3
BYD3_k127_4950028_0	1237149.C900_01219	0.0	1853.0	COG4932@1|root,COG5644@1|root,COG4932@2|Bacteria,COG5644@2|Bacteria,4NN56@976|Bacteroidetes,47Q8D@768503|Cytophagia	976|Bacteroidetes	M	amine dehydrogenase activity	-	-	-	-	-	-	-	-	-	-	-	-	CHU_C,VCBS
BYD3_k127_4950028_24	643867.Ftrac_3145	1.826e-99	335.0	COG3064@1|root,COG3064@2|Bacteria,4NEVD@976|Bacteroidetes,47KE6@768503|Cytophagia	976|Bacteroidetes	M	TIGRFAM Bacteroidetes-specific	-	-	-	-	-	-	-	-	-	-	-	-	PorP_SprF
BYD3_k127_4950028_3	1237149.C900_01447	1.33e-322	1003.0	COG0855@1|root,COG0855@2|Bacteria,4NE3P@976|Bacteroidetes,47KMU@768503|Cytophagia	976|Bacteroidetes	P	Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)	ppk	-	2.7.4.1	ko:K00937	ko00190,ko03018,map00190,map03018	-	-	-	ko00000,ko00001,ko01000,ko03019	-	-	-	PP_kinase,PP_kinase_C,PP_kinase_N
BYD3_k127_4950028_2	153721.MYP_2242	0.0	1073.0	COG0187@1|root,COG0187@2|Bacteria,4NE0P@976|Bacteroidetes,47K1X@768503|Cytophagia	976|Bacteroidetes	L	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner	gyrB	-	5.99.1.3	ko:K02470	-	-	-	-	ko00000,ko01000,ko03032,ko03400	-	-	-	DNA_gyraseB,DNA_gyraseB_C,HATPase_c,Toprim
BYD3_k127_4950028_22	1121373.KB903637_gene946	1.068e-107	357.0	COG2326@1|root,COG2326@2|Bacteria,4NFJ5@976|Bacteroidetes,47JG3@768503|Cytophagia	976|Bacteroidetes	S	TIGRFAM polyphosphate nucleotide phosphotransferase, PPK2 family	-	-	-	-	-	-	-	-	-	-	-	-	PPK2
BYD3_k127_4950028_35	1124780.ANNU01000032_gene1264	2e-45	167.0	COG1832@1|root,COG1832@2|Bacteria,4NSE8@976|Bacteroidetes,47RGM@768503|Cytophagia	976|Bacteroidetes	S	CoA binding domain	-	-	-	ko:K06929	-	-	-	-	ko00000	-	-	-	CoA_binding_2
BYD3_k127_4950028_5	1237149.C900_00885	4.766e-234	739.0	COG3975@1|root,COG3975@2|Bacteria,4NE4D@976|Bacteroidetes,47NWB@768503|Cytophagia	976|Bacteroidetes	S	M61 glycyl aminopeptidase	-	-	-	-	-	-	-	-	-	-	-	-	Peptidase_M61
BYD3_k127_4950028_8	1121904.ARBP01000012_gene1240	2.175e-222	700.0	COG2509@1|root,COG2509@2|Bacteria,4NEUQ@976|Bacteroidetes,47K0W@768503|Cytophagia	976|Bacteroidetes	S	FAD dependent oxidoreductase	-	-	-	ko:K07137	-	-	-	-	ko00000	-	-	-	FAD_binding_2,FAD_binding_3,GIDA,HI0933_like,Pyr_redox_2
BYD3_k127_4950028_12	1237149.C900_05078	3.05e-204	653.0	COG2849@1|root,COG2849@2|Bacteria,4NMDX@976|Bacteroidetes,47JEK@768503|Cytophagia	976|Bacteroidetes	S	MORN repeat variant	-	-	-	-	-	-	-	-	-	-	-	-	MORN_2
BYD3_k127_4950028_19	1237149.C900_05077	1.114e-121	398.0	COG3483@1|root,COG3483@2|Bacteria,4NFG4@976|Bacteroidetes,47KCQ@768503|Cytophagia	976|Bacteroidetes	E	Tryptophan 2,3-dioxygenase	kynA	-	1.13.11.11	ko:K00453	ko00380,ko01100,map00380,map01100	M00038	R00678	RC00356	ko00000,ko00001,ko00002,ko01000	-	-	-	Trp_dioxygenase
BYD3_k127_4950028_6	1237149.C900_05076	2.62e-227	707.0	COG1960@1|root,COG1960@2|Bacteria,4NEKJ@976|Bacteroidetes,47KQK@768503|Cytophagia	976|Bacteroidetes	I	acyl-CoA dehydrogenase	gcdH	-	1.3.8.6	ko:K00252	ko00071,ko00310,ko00362,ko00380,ko01100,ko01120,ko01130,map00071,map00310,map00362,map00380,map01100,map01120,map01130	M00032	R02487,R02488,R10074	RC00052,RC00156	ko00000,ko00001,ko00002,ko01000	-	-	-	Acyl-CoA_dh_1,Acyl-CoA_dh_M,Acyl-CoA_dh_N
BYD3_k127_4950028_25	1237149.C900_03719	1.125e-93	319.0	2CG1Y@1|root,2Z9QX@2|Bacteria,4NJI6@976|Bacteroidetes,47PFJ@768503|Cytophagia	976|Bacteroidetes	S	Protein of unknown function (DUF1573)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1573
BYD3_k127_4950028_16	1124780.ANNU01000032_gene1270	1.762e-156	499.0	COG0180@1|root,COG0180@2|Bacteria,4NETX@976|Bacteroidetes,47JNM@768503|Cytophagia	976|Bacteroidetes	J	Belongs to the class-I aminoacyl-tRNA synthetase family	trpS	-	6.1.1.2	ko:K01867	ko00970,map00970	M00359,M00360	R03664	RC00055,RC00523	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	-	-	-	tRNA-synt_1b
BYD3_k127_4950028_39	1237149.C900_05647	2.784e-36	141.0	2DN0J@1|root,32UI3@2|Bacteria,4NT4U@976|Bacteroidetes,47R55@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_4950028_11	1237149.C900_05646	7.452e-208	661.0	COG1109@1|root,COG1109@2|Bacteria,4NFU7@976|Bacteroidetes,47KI8@768503|Cytophagia	976|Bacteroidetes	G	Phosphoglucomutase phosphomannomutase alpha beta alpha domain I	pgcA	-	5.4.2.2	ko:K01835	ko00010,ko00030,ko00052,ko00230,ko00500,ko00520,ko00521,ko01100,ko01110,ko01120,ko01130,map00010,map00030,map00052,map00230,map00500,map00520,map00521,map01100,map01110,map01120,map01130	M00549	R00959,R01057,R08639	RC00408	ko00000,ko00001,ko00002,ko01000	-	-	-	PGM_PMM_I,PGM_PMM_II,PGM_PMM_III,PGM_PMM_IV
BYD3_k127_4950028_34	1121286.AUMT01000002_gene1298	6.662e-46	170.0	COG2318@1|root,COG2318@2|Bacteria,4NQEI@976|Bacteroidetes,1I2T3@117743|Flavobacteriia,3ZS40@59732|Chryseobacterium	976|Bacteroidetes	S	Protein of unknown function (DUF1572)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1572
BYD3_k127_4950028_10	1237149.C900_03608	7.101e-212	665.0	COG0621@1|root,COG0621@2|Bacteria,4NE0R@976|Bacteroidetes,47MPX@768503|Cytophagia	976|Bacteroidetes	J	TIGRFAM MiaB-like tRNA modifying enzyme	yqeV	-	2.8.4.5	ko:K18707	-	-	R10649	RC00003,RC03221	ko00000,ko01000,ko03016	-	-	-	Radical_SAM,UPF0004
BYD3_k127_4950028_27	1185876.BN8_01492	5.51e-88	295.0	COG1136@1|root,COG1136@2|Bacteria,4NGDU@976|Bacteroidetes,47JS7@768503|Cytophagia	976|Bacteroidetes	V	Part of the ABC transporter complex LolCDE involved in the translocation of	lolD	-	-	ko:K09810	ko02010,map02010	M00255	-	-	ko00000,ko00001,ko00002,ko01000,ko02000	3.A.1.125	-	-	ABC_tran
BYD3_k127_4950028_9	1237149.C900_03605	1.085e-218	683.0	COG0045@1|root,COG0045@2|Bacteria,4NFHA@976|Bacteroidetes,47JZU@768503|Cytophagia	976|Bacteroidetes	C	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit	sucC	-	6.2.1.5	ko:K01903	ko00020,ko00640,ko00660,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00640,map00660,map00720,map01100,map01110,map01120,map01130,map01200	M00009,M00011,M00173,M00374,M00620	R00405,R02404	RC00004,RC00014	ko00000,ko00001,ko00002,ko01000	-	-	-	ATP-grasp_2,Ligase_CoA
BYD3_k127_4950028_32	1237149.C900_03604	1.533e-65	234.0	COG2067@1|root,COG2067@2|Bacteria,4NVCH@976|Bacteroidetes,47SCX@768503|Cytophagia	976|Bacteroidetes	I	long-chain fatty acid transport protein	-	-	-	-	-	-	-	-	-	-	-	-	OMP_b-brl
BYD3_k127_4950028_17	153721.MYP_2562	4.611e-132	429.0	COG1077@1|root,COG1077@2|Bacteria,4P0IR@976|Bacteroidetes,47TJZ@768503|Cytophagia	976|Bacteroidetes	D	MreB/Mbl protein	-	-	-	-	-	-	-	-	-	-	-	-	MreB_Mbl
BYD3_k127_4950028_13	1250232.JQNJ01000001_gene473	3.519e-178	569.0	COG0673@1|root,COG0673@2|Bacteria,4NF4Q@976|Bacteroidetes,1HZG2@117743|Flavobacteriia	976|Bacteroidetes	S	Oxidoreductase family, NAD-binding Rossmann fold	-	-	-	-	-	-	-	-	-	-	-	-	GFO_IDH_MocA
BYD3_k127_4950028_21	1237149.C900_01581	2.723e-110	362.0	COG0330@1|root,COG0330@2|Bacteria,4NFNB@976|Bacteroidetes,47MT6@768503|Cytophagia	976|Bacteroidetes	O	PFAM SPFH domain Band 7 family	-	-	-	-	-	-	-	-	-	-	-	-	Band_7
BYD3_k127_4950028_7	926556.Echvi_3057	1.316e-224	701.0	COG0372@1|root,COG0372@2|Bacteria,4NFXK@976|Bacteroidetes,47JIN@768503|Cytophagia	976|Bacteroidetes	C	Belongs to the citrate synthase family	gltA	-	2.3.3.1	ko:K01647	ko00020,ko00630,ko01100,ko01110,ko01120,ko01130,ko01200,ko01210,ko01230,map00020,map00630,map01100,map01110,map01120,map01130,map01200,map01210,map01230	M00009,M00010,M00012,M00740	R00351	RC00004,RC00067	br01601,ko00000,ko00001,ko00002,ko01000	-	-	-	Citrate_synt
BYD3_k127_4950028_40	643867.Ftrac_0876	4.115e-30	121.0	COG4281@1|root,COG4281@2|Bacteria,4NVK0@976|Bacteroidetes,47RZ1@768503|Cytophagia	976|Bacteroidetes	I	Acyl CoA binding protein	-	-	-	-	-	-	-	-	-	-	-	-	ACBP
BYD3_k127_4950028_31	1237149.C900_01578	1.771e-67	236.0	COG1385@1|root,COG1385@2|Bacteria,4NE2S@976|Bacteroidetes,47PRE@768503|Cytophagia	976|Bacteroidetes	J	Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit	rsmE	-	2.1.1.193	ko:K09761	-	-	-	-	ko00000,ko01000,ko03009	-	-	-	Methyltrans_RNA
BYD3_k127_4950028_14	1237149.C900_01576	3.448e-172	549.0	COG0700@1|root,COG2715@1|root,COG0700@2|Bacteria,COG2715@2|Bacteria,4NFUN@976|Bacteroidetes,47JSE@768503|Cytophagia	976|Bacteroidetes	S	PFAM Nucleoside recognition	spmA	-	-	ko:K06373	-	-	-	-	ko00000	-	-	-	Gate
BYD3_k127_4950028_29	1237149.C900_01575	4.567e-82	275.0	2C4H4@1|root,32CX0@2|Bacteria,4NRZ7@976|Bacteroidetes,47SG5@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_4950028_38	1237149.C900_01572	8.97e-40	155.0	COG0526@1|root,COG0526@2|Bacteria,4NI00@976|Bacteroidetes,47QR6@768503|Cytophagia	976|Bacteroidetes	CO	Thioredoxin-like	-	-	-	-	-	-	-	-	-	-	-	-	AhpC-TSA,Redoxin
BYD3_k127_4950028_41	1121875.KB907550_gene655	1.742e-08	66.0	COG4447@1|root,COG4447@2|Bacteria,4NESU@976|Bacteroidetes,1HXIG@117743|Flavobacteriia	976|Bacteroidetes	G	BNR Asp-box repeat	-	-	-	-	-	-	-	-	-	-	-	-	Sortilin-Vps10
BYD3_k127_4950028_28	269798.CHU_2792	7.17e-87	305.0	COG4623@1|root,COG4623@2|Bacteria,4NHFW@976|Bacteroidetes,47NX6@768503|Cytophagia	976|Bacteroidetes	M	soluble lytic transglycosylase fused to an ABC-type amino acid-binding protein	mltF	-	-	ko:K18691	-	-	-	-	ko00000,ko01000,ko01011	-	-	-	SBP_bac_3,SLT
BYD3_k127_4950028_30	1254432.SCE1572_32535	3.476e-79	272.0	COG1028@1|root,COG1028@2|Bacteria,1MW9A@1224|Proteobacteria,42ZSX@68525|delta/epsilon subdivisions,2WV17@28221|Deltaproteobacteria,2YZ2N@29|Myxococcales	28221|Deltaproteobacteria	IQ	reductase	-	-	1.1.1.100	ko:K00059	ko00061,ko00333,ko00780,ko01040,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01040,map01100,map01130,map01212	M00083,M00572	R04533,R04534,R04536,R04543,R04566,R04953,R04964,R07759,R07763,R10116,R10120,R11671	RC00029,RC00117	ko00000,ko00001,ko00002,ko01000,ko01004	-	-	-	adh_short_C2
BYD3_k127_4950028_37	1144305.PMI02_05025	5.623e-42	162.0	COG2227@1|root,COG3774@1|root,COG2227@2|Bacteria,COG3774@2|Bacteria,1MYZP@1224|Proteobacteria,2VFKP@28211|Alphaproteobacteria,2KDX1@204457|Sphingomonadales	204457|Sphingomonadales	M	Glycosyltransferase sugar-binding region containing DXD motif	-	-	-	-	-	-	-	-	-	-	-	-	Gly_transf_sug
BYD3_k127_4950028_23	1150600.ADIARSV_3894	1.214e-106	357.0	COG0673@1|root,COG0673@2|Bacteria,4NE75@976|Bacteroidetes,1IPB6@117747|Sphingobacteriia	976|Bacteroidetes	S	Glucose--fructose oxidoreductase	gfo	-	1.1.99.28	ko:K00118	-	-	-	-	ko00000,ko01000	-	-	-	GFO_IDH_MocA,GFO_IDH_MocA_C
BYD3_k127_4957449_0	1185876.BN8_06600	1.585e-249	775.0	COG4948@1|root,COG4948@2|Bacteria,4NI24@976|Bacteroidetes,47N24@768503|Cytophagia	976|Bacteroidetes	M	mandelate racemase muconate lactonizing	-	-	4.2.1.8	ko:K08323	ko00040,ko01100,map00040,map01100	M00061	R05606	RC00543	ko00000,ko00001,ko00002,ko01000	-	-	-	MR_MLE_C,MR_MLE_N
BYD3_k127_4957449_6	1121481.AUAS01000015_gene2258	1.347e-53	193.0	COG2197@1|root,COG2197@2|Bacteria,4NQSY@976|Bacteroidetes,47QHW@768503|Cytophagia	976|Bacteroidetes	KT	helix_turn_helix, Lux Regulon	-	-	-	-	-	-	-	-	-	-	-	-	GerE
BYD3_k127_4957449_5	1121481.AUAS01000015_gene2259	9.073e-59	209.0	2CB8S@1|root,30PE6@2|Bacteria,4NU1E@976|Bacteroidetes,47RMQ@768503|Cytophagia	976|Bacteroidetes	S	Protein of unknown function (DUF4199)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4199
BYD3_k127_4957449_1	929556.Solca_3065	6.921e-131	422.0	COG2267@1|root,COG2267@2|Bacteria,4NGV3@976|Bacteroidetes,1IQWQ@117747|Sphingobacteriia	976|Bacteroidetes	I	Alpha/beta hydrolase family	-	-	-	-	-	-	-	-	-	-	-	-	Abhydrolase_6
BYD3_k127_4957449_3	929556.Solca_1659	5.008e-86	288.0	COG0702@1|root,COG0702@2|Bacteria,4NMI5@976|Bacteroidetes,1ISKB@117747|Sphingobacteriia	976|Bacteroidetes	GM	PFAM NAD-dependent epimerase dehydratase	-	-	-	-	-	-	-	-	-	-	-	-	NAD_binding_10
BYD3_k127_4957449_4	509635.N824_19370	1.408e-80	276.0	COG2207@1|root,COG2207@2|Bacteria,4NHYH@976|Bacteroidetes,1IPGH@117747|Sphingobacteriia	976|Bacteroidetes	K	PFAM helix-turn-helix- domain containing protein AraC type	-	-	-	-	-	-	-	-	-	-	-	-	HTH_18
BYD3_k127_4957449_7	204669.Acid345_2280	3.224e-32	129.0	COG0346@1|root,COG0346@2|Bacteria,3Y7U4@57723|Acidobacteria,2JN3V@204432|Acidobacteriia	204432|Acidobacteriia	E	lactoylglutathione lyase activity	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_4957449_2	926549.KI421517_gene776	1.418e-115	379.0	COG3509@1|root,COG3509@2|Bacteria,4NHFS@976|Bacteroidetes,47JDJ@768503|Cytophagia	976|Bacteroidetes	Q	Phospholipase/Carboxylesterase	-	-	-	ko:K03932	-	-	-	-	ko00000	-	CE1	-	Abhydrolase_2,Esterase_phd
BYD3_k127_4957449_8	655815.ZPR_4389	8.505e-15	77.0	COG1629@1|root,COG4771@2|Bacteria,4P1Z5@976|Bacteroidetes,1I04A@117743|Flavobacteriia	976|Bacteroidetes	P	Outer membrane receptor	-	-	-	-	-	-	-	-	-	-	-	-	CarbopepD_reg_2,Plug,STN,TonB_dep_Rec
BYD3_k127_4994743_25	1237149.C900_03147	6.401e-273	861.0	COG1033@1|root,COG1033@2|Bacteria,4NE0M@976|Bacteroidetes,47JQA@768503|Cytophagia	976|Bacteroidetes	S	COGs COG1033 exporter of the RND superfamily protein	-	-	-	ko:K07003	-	-	-	-	ko00000	-	-	-	MMPL
BYD3_k127_4994743_217	643867.Ftrac_2626	1.116e-60	229.0	COG4251@1|root,COG4372@1|root,COG4251@2|Bacteria,COG4372@2|Bacteria,4NP5A@976|Bacteroidetes,47PX4@768503|Cytophagia	976|Bacteroidetes	T	7TM diverse intracellular signalling	-	-	-	-	-	-	-	-	-	-	-	-	7TMR-DISMED2,7TMR-DISM_7TM,HATPase_c
BYD3_k127_4994743_79	1237149.C900_03148	4.758e-164	527.0	COG0232@1|root,COG0232@2|Bacteria,4NENM@976|Bacteroidetes,47KD3@768503|Cytophagia	976|Bacteroidetes	F	Deoxyguanosinetriphosphate triphosphohydrolase-like protein	dgt	-	3.1.5.1	ko:K01129	ko00230,map00230	-	R01856	RC00017	ko00000,ko00001,ko01000	-	-	-	HD,HD_assoc
BYD3_k127_4994743_189	1237149.C900_00377	9.004e-74	256.0	COG3228@1|root,COG3228@2|Bacteria,4NMII@976|Bacteroidetes,47QA7@768503|Cytophagia	976|Bacteroidetes	S	Glucose-regulated metallo-peptidase M90	-	-	-	ko:K09933	-	-	-	-	ko00000,ko01002	-	-	-	Peptidase_M90
BYD3_k127_4994743_27	1237149.C900_00375	3.518e-266	827.0	COG0423@1|root,COG0423@2|Bacteria,4NE1C@976|Bacteroidetes,47MCS@768503|Cytophagia	976|Bacteroidetes	J	Belongs to the class-II aminoacyl-tRNA synthetase family	glyQS	-	6.1.1.14	ko:K01880	ko00970,map00970	M00359,M00360	R03654	RC00055,RC00523	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029	-	-	-	HGTP_anticodon,tRNA-synt_2b
BYD3_k127_4994743_195	1237149.C900_00374	3.281e-69	252.0	COG2202@1|root,COG4251@1|root,COG2202@2|Bacteria,COG4251@2|Bacteria	2|Bacteria	T	photoreceptor activity	-	-	-	-	-	-	-	-	-	-	-	-	HATPase_c,HisKA,PAS,PAS_3,PAS_9,Reg_prop,Response_reg,STAS,Y_Y_Y
BYD3_k127_4994743_165	1237149.C900_00956	1.487e-87	300.0	COG0589@1|root,COG0589@2|Bacteria,4NGG8@976|Bacteroidetes,47T99@768503|Cytophagia	976|Bacteroidetes	T	Universal stress protein family	-	-	-	-	-	-	-	-	-	-	-	-	Usp
BYD3_k127_4994743_67	1189612.A33Q_0255	2.566e-176	560.0	COG0475@1|root,COG0475@2|Bacteria,4NFPE@976|Bacteroidetes,47NZK@768503|Cytophagia	976|Bacteroidetes	P	Sodium/hydrogen exchanger family	-	-	-	-	-	-	-	-	-	-	-	-	Na_H_Exchanger
BYD3_k127_4994743_103	1237149.C900_00373	6.765e-128	413.0	COG1694@1|root,COG3956@2|Bacteria,4NEA3@976|Bacteroidetes,47K4M@768503|Cytophagia	976|Bacteroidetes	S	PFAM MazG nucleotide pyrophosphohydrolase	mazG	-	3.6.1.66	ko:K02428	ko00230,map00230	-	R00426,R00720,R01855,R02100,R02720,R03531	RC00002	ko00000,ko00001,ko01000	-	-	-	MazG
BYD3_k127_4994743_280	1120965.AUBV01000008_gene2105	1.718e-21	95.0	2E5GR@1|root,3308C@2|Bacteria,4NUPC@976|Bacteroidetes,47S69@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_4994743_49	1120966.AUBU01000006_gene3433	2.196e-218	686.0	COG1109@1|root,COG1109@2|Bacteria,4NG3H@976|Bacteroidetes,47KR9@768503|Cytophagia	976|Bacteroidetes	G	Phosphoglucomutase phosphomannomutase alpha beta alpha domain I	glmM	-	5.4.2.8	ko:K01840	ko00051,ko00520,ko01100,ko01110,ko01130,map00051,map00520,map01100,map01110,map01130	M00114	R01818	RC00408	ko00000,ko00001,ko00002,ko01000	-	-	-	PGM_PMM_I,PGM_PMM_II,PGM_PMM_III,PGM_PMM_IV
BYD3_k127_4994743_83	1237149.C900_00369	1.071e-159	511.0	COG1104@1|root,COG1104@2|Bacteria,4NFF6@976|Bacteroidetes,47MAZ@768503|Cytophagia	976|Bacteroidetes	E	PFAM aminotransferase class V	iscS	-	2.8.1.7	ko:K04487	ko00730,ko01100,ko04122,map00730,map01100,map04122	-	R07460,R11528,R11529	RC01789,RC02313	ko00000,ko00001,ko01000,ko02048,ko03016,ko03029	-	-	-	Aminotran_5
BYD3_k127_4994743_108	272559.BF9343_3867	1.501e-121	411.0	COG0249@1|root,COG0249@2|Bacteria,4NE6X@976|Bacteroidetes,2FM62@200643|Bacteroidia,4AKJC@815|Bacteroidaceae	976|Bacteroidetes	L	DNA mismatch repair protein MutS	mutS_2	-	-	-	-	-	-	-	-	-	-	-	MutS_III,MutS_V
BYD3_k127_4994743_201	1048983.EL17_13060	7.371e-67	231.0	COG1956@1|root,COG1956@2|Bacteria,4NM6D@976|Bacteroidetes,47PCM@768503|Cytophagia	976|Bacteroidetes	T	GAF domain-containing protein	msrC	-	1.8.4.14	ko:K08968	ko00270,map00270	-	R02025	RC00639	ko00000,ko00001,ko01000	-	-	-	GAF,GAF_2
BYD3_k127_4994743_230	1121897.AUGO01000009_gene2966	1.066e-51	185.0	COG0662@1|root,COG0662@2|Bacteria,4NS6V@976|Bacteroidetes,1I30K@117743|Flavobacteriia,2NX8A@237|Flavobacterium	976|Bacteroidetes	G	Cupin domain	-	-	-	-	-	-	-	-	-	-	-	-	Cupin_2
BYD3_k127_4994743_214	1500281.JQKZ01000018_gene255	5.045e-61	218.0	COG0504@1|root,COG0504@2|Bacteria,4PH1C@976|Bacteroidetes,1IMA9@117743|Flavobacteriia,3ZR4F@59732|Chryseobacterium	976|Bacteroidetes	F	Glutamine amidotransferase class-I	-	-	-	-	-	-	-	-	-	-	-	-	GATase
BYD3_k127_4994743_100	1237149.C900_02785	1.219e-133	434.0	COG0117@1|root,COG1985@1|root,COG0117@2|Bacteria,COG1985@2|Bacteria,4NFJE@976|Bacteroidetes,47KBG@768503|Cytophagia	976|Bacteroidetes	H	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate	ribD	-	1.1.1.193,3.5.4.26	ko:K11752	ko00740,ko01100,ko01110,ko02024,map00740,map01100,map01110,map02024	M00125	R03458,R03459	RC00204,RC00933	ko00000,ko00001,ko00002,ko01000	-	-	-	RibD_C,dCMP_cyt_deam_1
BYD3_k127_4994743_206	1121904.ARBP01000003_gene6438	4.003e-64	229.0	COG2890@1|root,COG2890@2|Bacteria,4NDZB@976|Bacteroidetes,47PXV@768503|Cytophagia	976|Bacteroidetes	J	Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif	prmC	GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0008152,GO:0008168,GO:0008757,GO:0016740,GO:0016741,GO:0032259,GO:0044424,GO:0044444,GO:0044464	2.1.1.297	ko:K02493	-	-	R10806	RC00003,RC03279	ko00000,ko01000,ko03012	-	-	-	MTS
BYD3_k127_4994743_151	1237149.C900_02789	2.558e-92	310.0	COG5495@1|root,COG5495@2|Bacteria,4NI4M@976|Bacteroidetes,47MAX@768503|Cytophagia	976|Bacteroidetes	S	NADP oxidoreductase coenzyme F420-dependent	-	-	-	-	-	-	-	-	-	-	-	-	DUF2520,F420_oxidored,Rossmann-like
BYD3_k127_4994743_84	1120965.AUBV01000005_gene1543	1.153e-159	508.0	COG0113@1|root,COG0113@2|Bacteria,4NFW6@976|Bacteroidetes,47K34@768503|Cytophagia	976|Bacteroidetes	H	Belongs to the ALAD family	hemB	-	4.2.1.24	ko:K01698	ko00860,ko01100,ko01110,ko01120,map00860,map01100,map01110,map01120	M00121	R00036	RC00918,RC01781	ko00000,ko00001,ko00002,ko01000,ko04147	-	-	-	ALAD
BYD3_k127_4994743_215	1519464.HY22_12460	5.573e-61	235.0	COG4191@1|root,COG4191@2|Bacteria	2|Bacteria	T	Histidine kinase	phcR	-	2.7.13.3	ko:K02484,ko:K07649,ko:K10819,ko:K19622,ko:K20975	ko02020,ko02025,map02020,map02025	M00457,M00820	-	-	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	-	-	-	2CSK_N,HATPase_c,HisKA,PAS_4,PAS_7,Response_reg,dCache_1
BYD3_k127_4994743_153	1239962.C943_03551	2.906e-91	313.0	COG2207@1|root,COG2207@2|Bacteria,4NHEJ@976|Bacteroidetes,47MRE@768503|Cytophagia	976|Bacteroidetes	K	helix_turn_helix, arabinose operon control protein	-	-	-	-	-	-	-	-	-	-	-	-	HTH_18
BYD3_k127_4994743_85	1239962.C943_03552	4.931e-158	507.0	COG1835@1|root,COG1835@2|Bacteria,4NHPE@976|Bacteroidetes,47JWZ@768503|Cytophagia	976|Bacteroidetes	I	Acyltransferase family	-	-	-	ko:K11941	-	-	-	-	ko00000,ko01000	-	-	-	Acyl_transf_3
BYD3_k127_4994743_65	929562.Emtol_2058	7.6e-180	567.0	COG2255@1|root,COG2255@2|Bacteria,4NEB9@976|Bacteroidetes,47M82@768503|Cytophagia	976|Bacteroidetes	L	The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing	ruvB	-	3.6.4.12	ko:K03551	ko03440,map03440	-	-	-	ko00000,ko00001,ko01000,ko03400	-	-	-	RuvB_C,RuvB_N
BYD3_k127_4994743_130	1237149.C900_02765	4.146e-107	358.0	COG1477@1|root,COG1477@2|Bacteria,4NGEK@976|Bacteroidetes,47N34@768503|Cytophagia	976|Bacteroidetes	H	Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein	apbE	-	2.7.1.180	ko:K03734	-	-	-	-	ko00000,ko01000	-	-	-	ApbE
BYD3_k127_4994743_188	1237149.C900_02763	5.665e-76	263.0	COG0428@1|root,COG0428@2|Bacteria,4NG1R@976|Bacteroidetes,47Q1F@768503|Cytophagia	976|Bacteroidetes	P	ZIP Zinc transporter	-	-	-	-	-	-	-	-	-	-	-	-	Zip
BYD3_k127_4994743_276	391587.KAOT1_19397	4.662e-25	117.0	COG0726@1|root,COG0726@2|Bacteria,4NN39@976|Bacteroidetes,1I52I@117743|Flavobacteriia	976|Bacteroidetes	G	Polysaccharide deacetylase	-	-	-	-	-	-	-	-	-	-	-	-	Polysacc_deac_1
BYD3_k127_4994743_265	1408445.JHXP01000006_gene126	3.018e-32	137.0	COG1247@1|root,COG1247@2|Bacteria,1PZ4K@1224|Proteobacteria,1T7VF@1236|Gammaproteobacteria,1JFWU@118969|Legionellales	118969|Legionellales	M	Acetyltransferase (GNAT) domain	-	-	-	-	-	-	-	-	-	-	-	-	Acetyltransf_9
BYD3_k127_4994743_156	1237149.C900_03820	6.281e-91	312.0	COG0859@1|root,COG0859@2|Bacteria,4P2TG@976|Bacteroidetes	976|Bacteroidetes	M	Glycosyltransferase family 9 (heptosyltransferase)	-	-	-	-	-	-	-	-	-	-	-	-	Glyco_transf_9
BYD3_k127_4994743_277	925775.XVE_2298	3.333e-23	112.0	COG0438@1|root,COG0438@2|Bacteria,1PDQY@1224|Proteobacteria,1SE53@1236|Gammaproteobacteria,1X59A@135614|Xanthomonadales	135614|Xanthomonadales	M	Hexosyltransferase	-	-	-	-	-	-	-	-	-	-	-	-	Glyco_trans_4_4,Glyco_transf_4,Glycos_transf_1
BYD3_k127_4994743_181	1237149.C900_03822	9.68e-82	284.0	COG1216@1|root,COG1216@2|Bacteria	2|Bacteria	V	Glycosyl transferase, family 2	-	-	-	-	-	-	-	-	-	-	-	-	Glyco_tranf_2_3,Glycos_transf_2
BYD3_k127_4994743_261	755732.Fluta_0717	7.792e-35	145.0	COG2520@1|root,COG2520@2|Bacteria,4NVH3@976|Bacteroidetes,1IKD5@117743|Flavobacteriia	976|Bacteroidetes	J	Methyltransferase FkbM domain	-	-	-	-	-	-	-	-	-	-	-	-	Methyltransf_21
BYD3_k127_4994743_241	1237149.C900_03821	2.119e-48	187.0	COG0438@1|root,COG0438@2|Bacteria	2|Bacteria	M	transferase activity, transferring glycosyl groups	-	-	-	-	-	-	-	-	-	-	-	-	Glyco_trans_4_4,Glyco_transf_4,Glycos_transf_1,Glycos_transf_2
BYD3_k127_4994743_205	385682.AFSL01000049_gene505	2.356e-64	242.0	COG1132@1|root,COG1132@2|Bacteria,4NE2D@976|Bacteroidetes,2FMUK@200643|Bacteroidia,3XJSM@558415|Marinilabiliaceae	976|Bacteroidetes	V	ABC transporter transmembrane region	-	-	-	ko:K06147	-	-	-	-	ko00000,ko02000	3.A.1.106,3.A.1.109,3.A.1.21	-	-	ABC_membrane,ABC_tran
BYD3_k127_4994743_190	41431.PCC8801_0388	1.468e-72	251.0	COG2227@1|root,COG2227@2|Bacteria,1G4PI@1117|Cyanobacteria	1117|Cyanobacteria	H	Methyltransferase domain	-	-	-	-	-	-	-	-	-	-	-	-	Methyltransf_12
BYD3_k127_4994743_184	504472.Slin_2951	4.861e-77	268.0	COG0463@1|root,COG0463@2|Bacteria,4NGWW@976|Bacteroidetes,47P65@768503|Cytophagia	976|Bacteroidetes	M	Glycosyl transferase family 2	-	-	-	-	-	-	-	-	-	-	-	-	Glycos_transf_2
BYD3_k127_4994743_62	1237149.C900_03019	1.462e-191	608.0	COG1032@1|root,COG1032@2|Bacteria,4NKFV@976|Bacteroidetes	976|Bacteroidetes	C	Radical SAM	-	-	-	-	-	-	-	-	-	-	-	-	B12-binding,Radical_SAM
BYD3_k127_4994743_213	1237149.C900_03020	3.082e-62	224.0	COG0500@1|root,COG2226@2|Bacteria,4NICK@976|Bacteroidetes	976|Bacteroidetes	Q	Methyltransferase domain	-	-	-	-	-	-	-	-	-	-	-	-	Methyltransf_25
BYD3_k127_4994743_53	1237149.C900_03021	4.511e-208	657.0	COG1032@1|root,COG1032@2|Bacteria,4NETM@976|Bacteroidetes	976|Bacteroidetes	C	Fe-S oxidoreductase	-	-	-	-	-	-	-	-	-	-	-	-	B12-binding,Radical_SAM
BYD3_k127_4994743_172	1237149.C900_03022	1.023e-83	290.0	COG1708@1|root,COG1708@2|Bacteria,4NPRU@976|Bacteroidetes	976|Bacteroidetes	S	nucleotidyltransferase activity	-	-	-	-	-	-	-	-	-	-	-	-	NTP_transf_2
BYD3_k127_4994743_138	1237149.C900_03024	2.074e-101	337.0	COG1216@1|root,COG1216@2|Bacteria,4NGNS@976|Bacteroidetes,47UUA@768503|Cytophagia	976|Bacteroidetes	S	Glycosyltransferase like family 2	-	-	-	ko:K07011	-	-	-	-	ko00000	-	-	-	Glyco_tranf_2_3,Glycos_transf_2
BYD3_k127_4994743_18	1185876.BN8_01322	1.525e-303	941.0	COG0365@1|root,COG0365@2|Bacteria,4NEAD@976|Bacteroidetes,47JMW@768503|Cytophagia	976|Bacteroidetes	I	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA	acsA	-	6.2.1.1	ko:K01895	ko00010,ko00620,ko00640,ko00680,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00620,map00640,map00680,map00720,map01100,map01110,map01120,map01130,map01200	M00357	R00235,R00236,R00316,R00926,R01354	RC00004,RC00012,RC00043,RC00070,RC02746,RC02816	ko00000,ko00001,ko00002,ko01000,ko01004	-	-	-	ACAS_N,AMP-binding,AMP-binding_C
BYD3_k127_4994743_281	926549.KI421517_gene1026	1.984e-19	94.0	COG3584@1|root,COG3584@2|Bacteria,4PBIE@976|Bacteroidetes,47VXW@768503|Cytophagia	976|Bacteroidetes	S	3D domain protein	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_4994743_66	1237149.C900_04444	2.471e-176	560.0	COG1473@1|root,COG1473@2|Bacteria,4NGBI@976|Bacteroidetes,47KGA@768503|Cytophagia	976|Bacteroidetes	S	PFAM Peptidase family M20 M25 M40	amaA	-	-	ko:K01436	-	-	-	-	ko00000,ko01000,ko01002	-	-	-	M20_dimer,Peptidase_M20
BYD3_k127_4994743_272	1237149.C900_04443	4.377e-30	125.0	2EJD3@1|root,33D44@2|Bacteria,4NP3M@976|Bacteroidetes,47PW7@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	SPOR
BYD3_k127_4994743_1	1237149.C900_04442	0.0	1733.0	COG0653@1|root,COG0653@2|Bacteria,4NF7C@976|Bacteroidetes,47JTE@768503|Cytophagia	976|Bacteroidetes	U	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane	secA	GO:0000166,GO:0003674,GO:0003824,GO:0005215,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005887,GO:0006810,GO:0008104,GO:0008144,GO:0008150,GO:0008320,GO:0008565,GO:0015031,GO:0015399,GO:0015405,GO:0015440,GO:0015450,GO:0015462,GO:0015833,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0022804,GO:0022857,GO:0022884,GO:0030554,GO:0031224,GO:0031226,GO:0031522,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0033036,GO:0033220,GO:0035639,GO:0036094,GO:0042623,GO:0042626,GO:0042886,GO:0042887,GO:0043167,GO:0043168,GO:0043492,GO:0043952,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0045184,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071806,GO:0071944,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:1904680	-	ko:K03070	ko02024,ko03060,ko03070,map02024,map03060,map03070	M00335	-	-	ko00000,ko00001,ko00002,ko02044	3.A.5.1,3.A.5.10,3.A.5.2,3.A.5.4	-	-	Helicase_C,SEC-C,SecA_DEAD,SecA_PP_bind,SecA_SW
BYD3_k127_4994743_154	1237149.C900_04441	5.388e-91	306.0	COG0253@1|root,COG0253@2|Bacteria,4NF26@976|Bacteroidetes,47KR3@768503|Cytophagia	976|Bacteroidetes	E	Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan	dapF	GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006553,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0008837,GO:0009058,GO:0009066,GO:0009067,GO:0009085,GO:0009089,GO:0009987,GO:0016053,GO:0016853,GO:0016854,GO:0016855,GO:0019752,GO:0036361,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046451,GO:0047661,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607	5.1.1.7	ko:K01778	ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00300,map01100,map01110,map01120,map01130,map01230	M00016,M00525,M00527	R02735	RC00302	ko00000,ko00001,ko00002,ko01000	-	-	-	DAP_epimerase
BYD3_k127_4994743_2	1124780.ANNU01000051_gene2062	0.0	1607.0	COG0458@1|root,COG0458@2|Bacteria,4NEQ0@976|Bacteroidetes,47ME8@768503|Cytophagia	976|Bacteroidetes	EF	PFAM Carbamoyl-phosphate synthase L chain, ATP binding	carB	-	6.3.5.5	ko:K01955	ko00240,ko00250,ko01100,map00240,map00250,map01100	M00051	R00256,R00575,R01395,R10948,R10949	RC00002,RC00010,RC00043,RC02750,RC02798,RC03314	ko00000,ko00001,ko00002,ko01000	-	-	-	CPSase_L_D2,CPSase_L_D3,MGS
BYD3_k127_4994743_35	926549.KI421517_gene2838	5.158e-250	782.0	COG2303@1|root,COG2303@2|Bacteria,4NEF2@976|Bacteroidetes,47JQ2@768503|Cytophagia	976|Bacteroidetes	E	PFAM glucose-methanol-choline oxidoreductase	-	-	-	-	-	-	-	-	-	-	-	-	FAD_binding_2,GMC_oxred_C,GMC_oxred_N
BYD3_k127_4994743_46	1121904.ARBP01000016_gene5200	3.204e-222	731.0	COG1404@1|root,COG3291@1|root,COG1404@2|Bacteria,COG3291@2|Bacteria,4NF1M@976|Bacteroidetes	976|Bacteroidetes	O	Belongs to the peptidase S8 family	-	-	3.4.21.66	ko:K08651	-	-	-	-	ko00000,ko01000,ko01002,ko03110	-	-	-	Peptidase_S8
BYD3_k127_4994743_76	313606.M23134_03031	2.563e-165	530.0	COG1721@1|root,COG1721@2|Bacteria,4NE10@976|Bacteroidetes,47JBI@768503|Cytophagia	976|Bacteroidetes	S	Protein of unknown function DUF58	-	-	-	-	-	-	-	-	-	-	-	-	DUF58
BYD3_k127_4994743_95	761193.Runsl_1868	5.436e-137	443.0	COG0714@1|root,COG0714@2|Bacteria,4NDVZ@976|Bacteroidetes,47KX2@768503|Cytophagia	976|Bacteroidetes	S	ATPase family associated with various cellular activities (AAA)	-	-	-	ko:K03924	-	-	-	-	ko00000,ko01000	-	-	-	AAA_3
BYD3_k127_4994743_176	1124780.ANNU01000051_gene2076	1.065e-82	289.0	28IVH@1|root,2Z8TX@2|Bacteria,4NEEW@976|Bacteroidetes,47N52@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	DUF4350
BYD3_k127_4994743_263	1454007.JAUG01000004_gene2655	1.62e-33	139.0	29GF6@1|root,303CZ@2|Bacteria,4NR6I@976|Bacteroidetes,1IT48@117747|Sphingobacteriia	976|Bacteroidetes	S	Domain of unknown function (DUF4129)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4129
BYD3_k127_4994743_271	929556.Solca_4232	2.387e-30	132.0	COG1377@1|root,COG1377@2|Bacteria,4NMN3@976|Bacteroidetes,1ITYV@117747|Sphingobacteriia	976|Bacteroidetes	NU	Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_4994743_137	313606.M23134_02570	1.584e-101	340.0	COG1300@1|root,COG1300@2|Bacteria,4NG8D@976|Bacteroidetes,47MPK@768503|Cytophagia	976|Bacteroidetes	S	Stage II sporulation protein M	-	-	-	-	-	-	-	-	-	-	-	-	SpoIIM
BYD3_k127_4994743_73	760192.Halhy_4130	7.493e-168	536.0	COG2355@1|root,COG2355@2|Bacteria,4NEBG@976|Bacteroidetes,1IQAA@117747|Sphingobacteriia	976|Bacteroidetes	E	Membrane dipeptidase (Peptidase family M19)	-	-	3.4.13.19	ko:K01273	-	-	-	-	ko00000,ko00537,ko01000,ko01002,ko04147	-	-	-	Peptidase_M19
BYD3_k127_4994743_235	1124780.ANNU01000051_gene2080	2.377e-50	187.0	COG1714@1|root,COG1714@2|Bacteria,4NH7U@976|Bacteroidetes,47P9X@768503|Cytophagia	976|Bacteroidetes	S	RDD family	-	-	-	-	-	-	-	-	-	-	-	-	RDD
BYD3_k127_4994743_258	1237149.C900_01168	2.937e-36	139.0	COG4892@1|root,COG4892@2|Bacteria,4NSAM@976|Bacteroidetes,47R83@768503|Cytophagia	976|Bacteroidetes	S	PFAM Cytochrome b5-like Heme Steroid binding domain	-	-	-	-	-	-	-	-	-	-	-	-	Cyt-b5
BYD3_k127_4994743_150	1237149.C900_01166	1.714e-92	311.0	COG2971@1|root,COG2971@2|Bacteria,4NEV4@976|Bacteroidetes,47MGQ@768503|Cytophagia	976|Bacteroidetes	G	N-acetylglucosamine kinase	-	-	-	-	-	-	-	-	-	-	-	-	BcrAD_BadFG
BYD3_k127_4994743_115	926549.KI421517_gene658	2.567e-115	377.0	COG2103@1|root,COG2103@2|Bacteria,4NEPY@976|Bacteroidetes,47K6T@768503|Cytophagia	976|Bacteroidetes	G	Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate	murQ	-	4.2.1.126	ko:K07106	ko00520,ko01100,map00520,map01100	-	R08555	RC00397,RC00746	ko00000,ko00001,ko01000	-	-	-	SIS
BYD3_k127_4994743_143	1237149.C900_01164	4.768e-96	316.0	28M4Q@1|root,2ZAIK@2|Bacteria,4NJC3@976|Bacteroidetes,47P7F@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_4994743_237	1189612.A33Q_1545	1.388e-49	184.0	COG3091@1|root,COG3091@2|Bacteria,4NDXX@976|Bacteroidetes,47QAA@768503|Cytophagia	976|Bacteroidetes	S	PFAM SprT-like family	sprT	-	-	-	-	-	-	-	-	-	-	-	SprT-like
BYD3_k127_4994743_56	1279009.ADICEAN_02693	4.506e-202	636.0	COG1160@1|root,COG1160@2|Bacteria,4NE2J@976|Bacteroidetes,47K6M@768503|Cytophagia	976|Bacteroidetes	S	GTPase that plays an essential role in the late steps of ribosome biogenesis	der	-	-	ko:K03977	-	-	-	-	ko00000,ko03009	-	-	-	KH_dom-like,MMR_HSR1
BYD3_k127_4994743_131	1237149.C900_01159	5.642e-106	355.0	COG1159@1|root,COG1159@2|Bacteria,4NES2@976|Bacteroidetes,47K35@768503|Cytophagia	976|Bacteroidetes	S	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism	era	-	-	ko:K03595	-	-	-	-	ko00000,ko03009,ko03029	-	-	-	KH_2,MMR_HSR1
BYD3_k127_4994743_37	929703.KE386491_gene3361	7.38e-244	766.0	COG1132@1|root,COG1132@2|Bacteria,4NEE7@976|Bacteroidetes,47KAB@768503|Cytophagia	976|Bacteroidetes	V	ABC transporter transmembrane region	-	-	-	-	-	-	-	-	-	-	-	-	ABC_membrane,ABC_tran
BYD3_k127_4994743_275	1122621.ATZA01000006_gene682	1.43e-26	111.0	COG2827@1|root,COG2827@2|Bacteria,4NV6N@976|Bacteroidetes,1IUQV@117747|Sphingobacteriia	976|Bacteroidetes	L	GIY-YIG catalytic domain protein	-	-	-	ko:K07461	-	-	-	-	ko00000	-	-	-	GIY-YIG
BYD3_k127_4994743_256	710111.FraQA3DRAFT_3016	3.347e-40	160.0	COG2230@1|root,COG2230@2|Bacteria	2|Bacteria	M	cyclopropane-fatty-acyl-phospholipid synthase	-	-	2.1.1.79	ko:K00574	-	-	-	-	ko00000,ko01000	-	-	-	Methyltransf_23,Methyltransf_25,Methyltransf_31,Methyltransf_32
BYD3_k127_4994743_22	694427.Palpr_0339	3.027e-287	895.0	COG4948@1|root,COG4948@2|Bacteria,4PKP3@976|Bacteroidetes,2FMI4@200643|Bacteroidia,22W6G@171551|Porphyromonadaceae	976|Bacteroidetes	M	Glycosyl-hydrolase 97 C-terminal, oligomerisation	-	-	3.2.1.20	ko:K01187	ko00052,ko00500,ko01100,map00052,map00500,map01100	-	R00028,R00801,R00802,R06087,R06088	RC00028,RC00049,RC00077	ko00000,ko00001,ko01000	-	GH31	-	GH97_C,GH97_N,Glyco_hydro_97
BYD3_k127_4994743_117	1237149.C900_04572	1.146e-114	375.0	COG0005@1|root,COG0005@2|Bacteria,4NE4J@976|Bacteroidetes,47JII@768503|Cytophagia	976|Bacteroidetes	F	The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate	punA	-	2.4.2.1	ko:K03783	ko00230,ko00240,ko00760,ko01100,ko01110,map00230,map00240,map00760,map01100,map01110	-	R01561,R01863,R01969,R02147,R02294,R02295,R02297,R02484,R02557,R02748,R08368,R10244	RC00033,RC00063,RC00122	ko00000,ko00001,ko01000	-	-	-	PNP_UDP_1
BYD3_k127_4994743_121	700598.Niako_2569	3.522e-113	379.0	COG1538@1|root,COG1538@2|Bacteria,4NEMI@976|Bacteroidetes,1INTW@117747|Sphingobacteriia	976|Bacteroidetes	MU	PFAM Outer membrane efflux protein	-	-	-	-	-	-	-	-	-	-	-	-	OEP
BYD3_k127_4994743_3	700598.Niako_2568	0.0	1471.0	COG0841@1|root,COG0841@2|Bacteria,4NDZG@976|Bacteroidetes,1IP63@117747|Sphingobacteriia	976|Bacteroidetes	V	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family	bepE_4	-	-	ko:K03296,ko:K18138	ko01501,ko01503,map01501,map01503	M00647,M00699,M00718	-	-	ko00000,ko00001,ko00002,ko01504,ko02000	2.A.6.2	-	-	ACR_tran
BYD3_k127_4994743_128	700598.Niako_2567	1.097e-108	362.0	COG0845@1|root,COG0845@2|Bacteria,4NERP@976|Bacteroidetes,1IQN0@117747|Sphingobacteriia	976|Bacteroidetes	M	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family	-	-	-	ko:K03585	ko01501,ko01503,map01501,map01503	M00646,M00647,M00699,M00718	-	-	ko00000,ko00001,ko00002,ko01504,ko02000,ko03036	2.A.6.2,8.A.1.6	-	-	HlyD_D23
BYD3_k127_4994743_203	313606.M23134_00014	1.126e-65	229.0	COG0237@1|root,COG0237@2|Bacteria,4NQKS@976|Bacteroidetes,47P6S@768503|Cytophagia	976|Bacteroidetes	H	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A	coaE	GO:0003674,GO:0003824,GO:0004140,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006732,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0015936,GO:0015937,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0033865,GO:0033866,GO:0033875,GO:0034030,GO:0034032,GO:0034033,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046390,GO:0046483,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576	2.7.1.24	ko:K00859	ko00770,ko01100,map00770,map01100	M00120	R00130	RC00002,RC00078	ko00000,ko00001,ko00002,ko01000	-	-	-	CoaE
BYD3_k127_4994743_238	1124780.ANNU01000018_gene1652	2.273e-49	189.0	COG4856@1|root,COG4856@2|Bacteria,4NK5K@976|Bacteroidetes,47K4N@768503|Cytophagia	976|Bacteroidetes	S	YbbR-like protein	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_4994743_273	1237149.C900_03470	1.569e-29	120.0	COG1862@1|root,COG1862@2|Bacteria,4NUT4@976|Bacteroidetes,47R3A@768503|Cytophagia	976|Bacteroidetes	U	TIGRFAM preprotein translocase, YajC subunit	yajC	-	-	ko:K03210	ko02024,ko03060,ko03070,map02024,map03060,map03070	M00335	-	-	ko00000,ko00001,ko00002,ko02044	3.A.5.1,3.A.5.2	-	-	YajC
BYD3_k127_4994743_218	1237149.C900_03471	2.361e-60	216.0	2CG1Y@1|root,31EK1@2|Bacteria,4NUTU@976|Bacteroidetes,47XYM@768503|Cytophagia	976|Bacteroidetes	S	Protein of unknown function (DUF1573)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1573
BYD3_k127_4994743_267	1237149.C900_03472	1.301e-31	126.0	COG4980@1|root,COG4980@2|Bacteria,4NVHP@976|Bacteroidetes,47RXK@768503|Cytophagia	976|Bacteroidetes	S	YtxH-like protein	-	-	-	-	-	-	-	-	-	-	-	-	YtxH
BYD3_k127_4994743_135	1237149.C900_03473	3.373e-103	348.0	COG0781@1|root,COG0781@2|Bacteria,4NDVR@976|Bacteroidetes,47M4A@768503|Cytophagia	976|Bacteroidetes	K	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons	nusB	-	-	ko:K03625	-	-	-	-	ko00000,ko03009,ko03021	-	-	-	NusB
BYD3_k127_4994743_162	1124780.ANNU01000035_gene282	3.539e-88	295.0	COG0009@1|root,COG0009@2|Bacteria,4NDZR@976|Bacteroidetes,47KWK@768503|Cytophagia	976|Bacteroidetes	J	Belongs to the SUA5 family	yciO	-	-	-	-	-	-	-	-	-	-	-	Sua5_yciO_yrdC
BYD3_k127_4994743_96	1237149.C900_03871	2.05e-136	442.0	COG1559@1|root,COG1559@2|Bacteria,4NG17@976|Bacteroidetes,47J93@768503|Cytophagia	976|Bacteroidetes	S	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation	mltG	-	-	ko:K07082	-	-	-	-	ko00000	-	-	-	YceG
BYD3_k127_4994743_227	1237149.C900_03872	2.665e-54	193.0	COG0824@1|root,COG0824@2|Bacteria,4NQGW@976|Bacteroidetes,47Q99@768503|Cytophagia	976|Bacteroidetes	S	TIGRFAM acyl-CoA thioester hydrolase, YbgC YbaW family	ybgC	-	-	ko:K07107	-	-	-	-	ko00000,ko01000	-	-	-	4HBT,4HBT_2
BYD3_k127_4994743_124	1237149.C900_03873	2.565e-112	371.0	COG1295@1|root,COG1295@2|Bacteria,4NFY6@976|Bacteroidetes,47KA8@768503|Cytophagia	976|Bacteroidetes	S	TIGRFAM YihY family protein (not ribonuclease BN)	yfkH	-	-	ko:K07058	-	-	-	-	ko00000	-	-	-	Virul_fac_BrkB
BYD3_k127_4994743_42	1237149.C900_04608	3.17e-229	736.0	COG2982@1|root,COG2982@2|Bacteria,4NHD3@976|Bacteroidetes,47KTA@768503|Cytophagia	976|Bacteroidetes	M	AsmA-like C-terminal region	-	-	-	-	-	-	-	-	-	-	-	-	AsmA,AsmA_2,DUF3971
BYD3_k127_4994743_77	700598.Niako_4382	4.325e-165	521.0	COG0388@1|root,COG0388@2|Bacteria,4NEME@976|Bacteroidetes,1IPIY@117747|Sphingobacteriia	976|Bacteroidetes	S	PFAM Nitrilase cyanide hydratase and apolipoprotein N-acyltransferase	pabB	-	3.5.1.53,3.5.1.6	ko:K01431,ko:K12251	ko00240,ko00330,ko00410,ko00770,ko00983,ko01100,map00240,map00330,map00410,map00770,map00983,map01100	M00046	R00905,R01152,R04666,R08228	RC00096	ko00000,ko00001,ko00002,ko01000	-	-	-	CN_hydrolase
BYD3_k127_4994743_50	1237149.C900_01764	4.471e-218	685.0	COG0493@1|root,COG0493@2|Bacteria,4NG9R@976|Bacteroidetes,47M2V@768503|Cytophagia	976|Bacteroidetes	E	TIGRFAM glutamate synthases, NADH NADPH, small subunit	gltD	-	1.4.1.13,1.4.1.14	ko:K00266	ko00250,ko00910,ko01100,ko01110,ko01120,ko01130,ko01230,map00250,map00910,map01100,map01110,map01120,map01130,map01230	-	R00093,R00114,R00248	RC00006,RC00010,RC02799	ko00000,ko00001,ko01000	-	-	-	Fer4_20,Pyr_redox_2
BYD3_k127_4994743_0	880070.Cycma_1757	0.0	2126.0	COG0067@1|root,COG0069@1|root,COG0070@1|root,COG0067@2|Bacteria,COG0069@2|Bacteria,COG0070@2|Bacteria,4NFKH@976|Bacteroidetes,47JB7@768503|Cytophagia	976|Bacteroidetes	E	glutamate synthase	gltB	-	1.4.1.13,1.4.1.14,1.4.7.1	ko:K00265,ko:K00284	ko00250,ko00630,ko00910,ko01100,ko01110,ko01120,ko01130,ko01230,map00250,map00630,map00910,map01100,map01110,map01120,map01130,map01230	-	R00021,R00093,R00114,R00248,R10086	RC00006,RC00010,RC02799	ko00000,ko00001,ko01000	-	-	-	GATase_2,GXGXG,Glu_syn_central,Glu_synthase
BYD3_k127_4994743_211	1237149.C900_01766	1.66e-62	221.0	COG4121@1|root,COG4121@2|Bacteria,4NE5S@976|Bacteroidetes,47QBX@768503|Cytophagia	976|Bacteroidetes	S	S-adenosyl-L-methionine-dependent methyltransferase	mnmC	-	-	-	-	-	-	-	-	-	-	-	Methyltransf_30
BYD3_k127_4994743_202	153721.MYP_1243	4.06e-66	228.0	COG0245@1|root,COG0245@2|Bacteria,4NP0N@976|Bacteroidetes,47PDR@768503|Cytophagia	976|Bacteroidetes	I	Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP)	ispF	-	4.6.1.12	ko:K01770	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	M00096	R05637	RC00002,RC01440	ko00000,ko00001,ko00002,ko01000	-	-	-	YgbB
BYD3_k127_4994743_68	1237149.C900_01768	4.549e-175	557.0	COG0612@1|root,COG0612@2|Bacteria,4NEDZ@976|Bacteroidetes,47JGY@768503|Cytophagia	976|Bacteroidetes	S	PFAM Peptidase M16 inactive domain	-	-	-	ko:K07263	-	-	-	-	ko00000,ko01000,ko01002	-	-	-	Peptidase_M16,Peptidase_M16_C
BYD3_k127_4994743_13	1237149.C900_01769	8.117e-321	992.0	COG0022@1|root,COG1071@1|root,COG0022@2|Bacteria,COG1071@2|Bacteria,4NE71@976|Bacteroidetes,47KFY@768503|Cytophagia	976|Bacteroidetes	C	Pyruvate 2-oxoglutarate dehydrogenase complex, dehydrogenase component beta subunit	bfmBA	-	1.2.4.4	ko:K11381	ko00280,ko00640,ko01100,ko01110,ko01130,map00280,map00640,map01100,map01110,map01130	M00036	R07599,R07600,R07601,R07602,R07603,R07604,R10996,R10997	RC00027,RC00627,RC02743,RC02883,RC02949,RC02953	br01601,ko00000,ko00001,ko00002,ko01000	-	-	-	E1_dh,Transket_pyr,Transketolase_C
BYD3_k127_4994743_260	643867.Ftrac_2813	4.043e-35	136.0	COG3118@1|root,COG3118@2|Bacteria,4NSE6@976|Bacteroidetes,47R3Q@768503|Cytophagia	976|Bacteroidetes	O	TIGRFAM bacillithiol system protein YtxJ	ytxJ	-	-	-	-	-	-	-	-	-	-	-	DUF2847
BYD3_k127_4994743_173	1237149.C900_01773	1.464e-83	284.0	28MPU@1|root,2ZAYW@2|Bacteria,4NRQD@976|Bacteroidetes,47NJK@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_4994743_182	1237149.C900_04701	4.554e-80	272.0	COG0810@1|root,COG0810@2|Bacteria,4NMG7@976|Bacteroidetes,47KAX@768503|Cytophagia	976|Bacteroidetes	U	Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins	-	-	-	ko:K03832	-	-	-	-	ko00000,ko02000	2.C.1.1	-	-	TonB_C
BYD3_k127_4994743_86	1237149.C900_04691	1.278e-153	496.0	COG2059@1|root,COG2059@2|Bacteria,4NNZ1@976|Bacteroidetes,47JQS@768503|Cytophagia	976|Bacteroidetes	P	TIGRFAM chromate transporter, chromate ion transporter (CHR) family	-	-	-	ko:K07240	-	-	-	-	ko00000,ko02000	2.A.51.1	-	-	Chromate_transp
BYD3_k127_4994743_88	866536.Belba_0547	3.782e-151	484.0	COG3491@1|root,COG3491@2|Bacteria,4NED5@976|Bacteroidetes,47JDX@768503|Cytophagia	976|Bacteroidetes	C	Belongs to the iron ascorbate-dependent oxidoreductase family	-	-	-	-	-	-	-	-	-	-	-	-	2OG-FeII_Oxy,DIOX_N
BYD3_k127_4994743_149	485917.Phep_0814	7.026e-93	311.0	COG0605@1|root,COG0605@2|Bacteria,4NK61@976|Bacteroidetes,1IRYF@117747|Sphingobacteriia	976|Bacteroidetes	C	Destroys radicals which are normally produced within the cells and which are toxic to biological systems	-	-	1.15.1.1	ko:K04564	ko04013,ko04068,ko04146,ko04211,ko04212,ko04213,ko05016,map04013,map04068,map04146,map04211,map04212,map04213,map05016	-	-	-	ko00000,ko00001,ko01000	-	-	-	Sod_Fe_C,Sod_Fe_N
BYD3_k127_4994743_198	1237149.C900_01035	1.279e-68	239.0	COG1381@1|root,COG1381@2|Bacteria,4NIBQ@976|Bacteroidetes,47K9Z@768503|Cytophagia	976|Bacteroidetes	L	Involved in DNA repair and RecF pathway recombination	recO	-	-	ko:K03584	ko03440,map03440	-	-	-	ko00000,ko00001,ko03400	-	-	-	RecO_C,RecO_N
BYD3_k127_4994743_170	1237149.C900_01033	3.025e-85	286.0	COG1435@1|root,COG1435@2|Bacteria,4NE5R@976|Bacteroidetes,47JA6@768503|Cytophagia	976|Bacteroidetes	F	thymidine kinase	tdk	GO:0003674,GO:0003824,GO:0004797,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006213,GO:0006259,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009120,GO:0009123,GO:0009124,GO:0009157,GO:0009162,GO:0009165,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0018130,GO:0019136,GO:0019205,GO:0019206,GO:0019438,GO:0019637,GO:0034641,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046104,GO:0046125,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0090304,GO:0090407,GO:1901135,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901576,GO:1901657	2.7.1.21	ko:K00857	ko00240,ko00983,ko01100,map00240,map00983,map01100	-	R01567,R02099,R08233	RC00002,RC00017	ko00000,ko00001,ko01000	-	-	-	TK
BYD3_k127_4994743_220	1237149.C900_01031	2.577e-58	217.0	COG3827@1|root,COG3827@2|Bacteria,4PMMQ@976|Bacteroidetes,47Y53@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_4994743_70	1237149.C900_01030	3.134e-171	548.0	COG0772@1|root,COG0772@2|Bacteria,4NDZD@976|Bacteroidetes,47JVQ@768503|Cytophagia	976|Bacteroidetes	D	Belongs to the SEDS family	rodA	-	-	ko:K05837	-	-	-	-	ko00000,ko03036	-	-	-	FTSW_RODA_SPOVE
BYD3_k127_4994743_23	1237149.C900_01029	3.054e-278	866.0	COG0768@1|root,COG0768@2|Bacteria,4NE47@976|Bacteroidetes,47JSM@768503|Cytophagia	976|Bacteroidetes	M	Penicillin-binding protein, dimerisation domain	mrdA	-	3.4.16.4	ko:K05515	ko00550,ko01501,map00550,map01501	-	-	-	ko00000,ko00001,ko01000,ko01011	-	-	-	PBP_dimer,Transpeptidase
BYD3_k127_4994743_244	1124780.ANNU01000005_gene2405	1.786e-46	172.0	2AFDM@1|root,315DF@2|Bacteria,4NQ5K@976|Bacteroidetes,47R21@768503|Cytophagia	976|Bacteroidetes	S	rod shape-determining protein MreD	mreD	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_4994743_179	1237149.C900_01027	2.413e-82	282.0	COG1792@1|root,COG1792@2|Bacteria,4NF14@976|Bacteroidetes,47KWQ@768503|Cytophagia	976|Bacteroidetes	M	Involved in formation and maintenance of cell shape	mreC	-	-	ko:K03570	-	-	-	-	ko00000,ko03036	9.B.157.1	-	-	MreC
BYD3_k127_4994743_59	1237149.C900_01026	1.899e-193	606.0	COG1077@1|root,COG1077@2|Bacteria,4NETQ@976|Bacteroidetes,47JQ4@768503|Cytophagia	976|Bacteroidetes	D	TIGRFAM cell shape determining protein, MreB Mrl family	mreB	-	-	ko:K03569	-	-	-	-	ko00000,ko02048,ko03036,ko04812	1.A.33.1,9.B.157.1	-	-	MreB_Mbl
BYD3_k127_4994743_47	1237149.C900_01025	3.02e-221	696.0	COG0138@1|root,COG0138@2|Bacteria,4NEZD@976|Bacteroidetes,47JQT@768503|Cytophagia	976|Bacteroidetes	F	Bifunctional purine biosynthesis protein PurH	purH	-	2.1.2.3,3.5.4.10	ko:K00602	ko00230,ko00670,ko01100,ko01110,ko01130,ko01523,map00230,map00670,map01100,map01110,map01130,map01523	M00048	R01127,R04560	RC00026,RC00263,RC00456	ko00000,ko00001,ko00002,ko01000,ko04147	-	-	-	AICARFT_IMPCHas,MGS
BYD3_k127_4994743_134	1124780.ANNU01000043_gene329	1.209e-103	344.0	COG0388@1|root,COG0388@2|Bacteria,4NE37@976|Bacteroidetes,47JPF@768503|Cytophagia	976|Bacteroidetes	S	PFAM Nitrilase cyanide hydratase and apolipoprotein N-acyltransferase	yafV	-	3.5.1.3	ko:K13566	ko00250,map00250	-	R00269,R00348	RC00010	ko00000,ko00001,ko01000	-	-	-	CN_hydrolase
BYD3_k127_4994743_94	485918.Cpin_0778	1.712e-137	447.0	COG0436@1|root,COG0436@2|Bacteria,4NES3@976|Bacteroidetes,1IP0R@117747|Sphingobacteriia	976|Bacteroidetes	E	PFAM Aminotransferase class I and II	ybdL	-	2.6.1.88	ko:K14287	-	-	R08618	RC00006,RC00025	ko00000,ko01000,ko01007	-	-	-	Aminotran_1_2
BYD3_k127_4994743_81	1237149.C900_00367	2.908e-162	516.0	COG0276@1|root,COG0276@2|Bacteria,4NE83@976|Bacteroidetes,47JH0@768503|Cytophagia	976|Bacteroidetes	H	Catalyzes the ferrous insertion into protoporphyrin IX	hemH	-	4.99.1.1,4.99.1.9	ko:K01772	ko00860,ko01100,ko01110,map00860,map01100,map01110	M00121	R00310,R11329	RC01012	ko00000,ko00001,ko00002,ko01000	-	-	-	Ferrochelatase
BYD3_k127_4994743_72	1237149.C900_00365	4.034e-168	537.0	COG0454@1|root,COG0456@2|Bacteria,4NFWE@976|Bacteroidetes,47M7W@768503|Cytophagia	976|Bacteroidetes	K	Psort location Cytoplasmic, score 8.96	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_4994743_91	1237149.C900_00364	4.272e-141	468.0	COG3829@1|root,COG4251@1|root,COG3829@2|Bacteria,COG4251@2|Bacteria,4NM7H@976|Bacteroidetes,47XEC@768503|Cytophagia	976|Bacteroidetes	T	PAS domain	-	-	-	-	-	-	-	-	-	-	-	-	HATPase_c,HisKA,PAS_3,PAS_4,PAS_9
BYD3_k127_4994743_291	1499967.BAYZ01000005_gene5453	2.555e-12	74.0	2DTZ2@1|root,33N9Y@2|Bacteria	2|Bacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_4994743_285	1237149.C900_04074	2.369e-17	87.0	COG3093@1|root,COG3093@2|Bacteria,4PC9U@976|Bacteroidetes,47X26@768503|Cytophagia	976|Bacteroidetes	K	Cro/C1-type HTH DNA-binding domain	-	-	-	-	-	-	-	-	-	-	-	-	HTH_26
BYD3_k127_4994743_259	1123276.KB893252_gene3696	2.709e-35	142.0	COG0500@1|root,COG2226@2|Bacteria,4NSPB@976|Bacteroidetes,47RD0@768503|Cytophagia	976|Bacteroidetes	Q	Methyltransferase domain	-	-	-	-	-	-	-	-	-	-	-	-	Methyltransf_12,Methyltransf_2,Methyltransf_25
BYD3_k127_4994743_274	1279009.ADICEAN_02902	6.982e-29	126.0	2DBER@1|root,2Z8TN@2|Bacteria,4NK2P@976|Bacteroidetes,47P45@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_4994743_147	880071.Fleli_2977	2.026e-94	317.0	COG0224@1|root,COG0224@2|Bacteria,4NECM@976|Bacteroidetes,47JM0@768503|Cytophagia	976|Bacteroidetes	C	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex	atpG	-	-	ko:K02115	ko00190,ko00195,ko01100,map00190,map00195,map01100	M00157	-	-	ko00000,ko00001,ko00002,ko00194	3.A.2.1	-	-	ATP-synt
BYD3_k127_4994743_26	1237149.C900_04605	4.085e-272	844.0	COG0056@1|root,COG0056@2|Bacteria,4NFZW@976|Bacteroidetes,47JFI@768503|Cytophagia	976|Bacteroidetes	C	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit	atpA	-	3.6.3.14	ko:K02111	ko00190,ko00195,ko01100,map00190,map00195,map01100	M00157	-	-	ko00000,ko00001,ko00002,ko00194,ko01000	3.A.2.1	-	-	ATP-synt_ab,ATP-synt_ab_C,ATP-synt_ab_N
BYD3_k127_4994743_232	1237149.C900_04604	2.701e-51	187.0	COG0712@1|root,COG0712@2|Bacteria,4NSNF@976|Bacteroidetes,47QGS@768503|Cytophagia	976|Bacteroidetes	C	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation	atpH	-	-	ko:K02113	ko00190,ko00195,ko01100,map00190,map00195,map01100	M00157	-	-	ko00000,ko00001,ko00002,ko00194	3.A.2.1	-	-	OSCP
BYD3_k127_4994743_255	641524.ADICYQ_1286	1.312e-42	162.0	COG0711@1|root,COG0711@2|Bacteria,4NQKA@976|Bacteroidetes,47Q9K@768503|Cytophagia	976|Bacteroidetes	C	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)	atpF	-	-	ko:K02109	ko00190,ko00195,ko01100,map00190,map00195,map01100	M00157	-	-	ko00000,ko00001,ko00002,ko00194	3.A.2.1	-	-	ATP-synt_B
BYD3_k127_4994743_278	388413.ALPR1_20523	8.727e-23	99.0	COG0636@1|root,COG0636@2|Bacteria,4NURW@976|Bacteroidetes,47S5V@768503|Cytophagia	976|Bacteroidetes	C	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation	atpE	GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0008324,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015399,GO:0015405,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016462,GO:0016469,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0032991,GO:0033177,GO:0034220,GO:0034641,GO:0034654,GO:0042623,GO:0042625,GO:0042626,GO:0043492,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044464,GO:0044769,GO:0045259,GO:0045263,GO:0046034,GO:0046390,GO:0046483,GO:0046933,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0099131,GO:0099132,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600	-	ko:K02110	ko00190,ko00195,ko01100,map00190,map00195,map01100	M00157	-	-	ko00000,ko00001,ko00002,ko00194	3.A.2.1	-	-	ATP-synt_C
BYD3_k127_4994743_127	1121859.KB890738_gene2968	6.122e-109	362.0	COG0356@1|root,COG0356@2|Bacteria,4NEPK@976|Bacteroidetes,47JYV@768503|Cytophagia	976|Bacteroidetes	C	it plays a direct role in the translocation of protons across the membrane	atpB	-	-	ko:K02108	ko00190,ko00195,ko01100,map00190,map00195,map01100	M00157	-	-	ko00000,ko00001,ko00002,ko00194,ko03110	3.A.2.1	-	-	ATP-synt_A
BYD3_k127_4994743_236	1237149.C900_04598	8.221e-50	181.0	COG1664@1|root,COG1664@2|Bacteria,4NUZA@976|Bacteroidetes,47RT9@768503|Cytophagia	976|Bacteroidetes	M	Polymer-forming cytoskeletal	-	-	-	-	-	-	-	-	-	-	-	-	Bactofilin
BYD3_k127_4994743_148	1237149.C900_04597	2.116e-93	314.0	COG0739@1|root,COG0739@2|Bacteria,4NFZN@976|Bacteroidetes,47PPP@768503|Cytophagia	976|Bacteroidetes	M	PFAM Peptidase family M23	nlpD_1	-	-	-	-	-	-	-	-	-	-	-	Peptidase_M23
BYD3_k127_4994743_30	1237149.C900_04596	3.034e-255	812.0	COG0457@1|root,COG0457@2|Bacteria,4NDV9@976|Bacteroidetes,47K0V@768503|Cytophagia	976|Bacteroidetes	S	Tetratricopeptide repeats	sprE	-	-	-	-	-	-	-	-	-	-	-	TPR_16,TPR_6,TPR_8
BYD3_k127_4994743_11	1237149.C900_04595	0.0	1059.0	COG5009@1|root,COG5009@2|Bacteria,4NECJ@976|Bacteroidetes,47K6R@768503|Cytophagia	976|Bacteroidetes	M	Penicillin binding protein transpeptidase	pbpB	-	2.4.1.129,3.4.16.4	ko:K05366	ko00550,ko01100,ko01501,map00550,map01100,map01501	-	-	-	ko00000,ko00001,ko01000,ko01003,ko01011	-	GT51	-	Transgly,Transpeptidase
BYD3_k127_4994743_38	1237149.C900_04594	7.913e-244	766.0	COG0322@1|root,COG0322@2|Bacteria,4NE61@976|Bacteroidetes,47JXP@768503|Cytophagia	976|Bacteroidetes	L	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision	uvrC	GO:0005575,GO:0005622,GO:0005623,GO:0006950,GO:0006974,GO:0008150,GO:0009380,GO:0009987,GO:0032991,GO:0033554,GO:0044424,GO:0044464,GO:0050896,GO:0051716,GO:1902494,GO:1905347,GO:1905348,GO:1990391	-	ko:K03703	ko03420,map03420	-	-	-	ko00000,ko00001,ko03400	-	-	-	GIY-YIG,HHH_2,HHH_5,UVR,UvrC_HhH_N
BYD3_k127_4994743_171	1237149.C900_04593	5.995e-84	290.0	2C97B@1|root,2ZAEJ@2|Bacteria,4NEK0@976|Bacteroidetes,47MC2@768503|Cytophagia	976|Bacteroidetes	S	TIGRFAM gliding motility associated protien GldN	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_4994743_113	1237149.C900_04592	3.169e-118	398.0	28HG4@1|root,2Z7S0@2|Bacteria,4NE3G@976|Bacteroidetes,47JTS@768503|Cytophagia	976|Bacteroidetes	S	TIGRFAM Gliding motility-associated protein GldM	gldM	-	-	-	-	-	-	-	-	-	-	-	GldM_C,GldM_N
BYD3_k127_4994743_111	1237149.C900_04591	2.682e-119	388.0	28IG3@1|root,2Z8HM@2|Bacteria,4NFJR@976|Bacteroidetes,47MA3@768503|Cytophagia	976|Bacteroidetes	S	TIGRFAM gliding motility-associated protein GldL	gldL	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_4994743_54	1237149.C900_04590	7.717e-203	634.0	COG1262@1|root,COG1262@2|Bacteria,4NGY2@976|Bacteroidetes,47KHB@768503|Cytophagia	976|Bacteroidetes	S	TIGRFAM Gliding motility-associated lipoprotein GldK	gldK	-	-	-	-	-	-	-	-	-	-	-	FGE-sulfatase
BYD3_k127_4994743_116	1237149.C900_04589	2.844e-115	379.0	COG0226@1|root,COG0226@2|Bacteria,4NKND@976|Bacteroidetes,47PVA@768503|Cytophagia	976|Bacteroidetes	P	Type IX secretion system membrane protein PorP/SprF	-	-	-	-	-	-	-	-	-	-	-	-	PorP_SprF
BYD3_k127_4994743_99	1237149.C900_04588	2.606e-134	431.0	COG1587@1|root,COG1587@2|Bacteria,4NEQ3@976|Bacteroidetes,47JYP@768503|Cytophagia	976|Bacteroidetes	H	Uroporphyrinogen-III synthase	hemD	-	4.2.1.75	ko:K01719	ko00860,ko01100,ko01110,ko01120,map00860,map01100,map01110,map01120	M00121	R03165	RC01861	ko00000,ko00001,ko00002,ko01000	-	-	-	HEM4
BYD3_k127_4994743_104	452471.Aasi_0352	5.511e-127	416.0	COG0635@1|root,COG0635@2|Bacteria,4NFEE@976|Bacteroidetes,47JXR@768503|Cytophagia	976|Bacteroidetes	H	Involved in the biosynthesis of porphyrin-containing compound	hemN	-	-	-	-	-	-	-	-	-	-	-	HemN_C,Radical_SAM
BYD3_k127_4994743_254	313606.M23134_02534	4.249e-43	162.0	2D41J@1|root,32TG2@2|Bacteria,4NTNX@976|Bacteroidetes,47RJ7@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_4994743_5	880070.Cycma_2921	0.0	1388.0	COG0542@1|root,COG0542@2|Bacteria,4NE1J@976|Bacteroidetes,47JFM@768503|Cytophagia	976|Bacteroidetes	O	Belongs to the ClpA ClpB family	clpC	-	-	ko:K03696	ko01100,map01100	-	-	-	ko00000,ko03110	-	-	-	AAA,AAA_2,ClpB_D2-small,Clp_N,UVR
BYD3_k127_4994743_226	1237149.C900_03869	1.532e-54	199.0	COG0224@1|root,COG0224@2|Bacteria,4NM5H@976|Bacteroidetes,47Q4T@768503|Cytophagia	976|Bacteroidetes	C	PFAM WbqC-like protein family	-	-	-	-	-	-	-	-	-	-	-	-	WbqC
BYD3_k127_4994743_28	1237149.C900_03476	8.464e-265	827.0	COG1132@1|root,COG1132@2|Bacteria,4NDY6@976|Bacteroidetes,47JPX@768503|Cytophagia	976|Bacteroidetes	V	ABC transporter transmembrane region	mdlA	-	-	ko:K18889	ko02010,map02010	M00707	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.106.13,3.A.1.106.5	-	-	ABC_membrane,ABC_tran
BYD3_k127_4994743_19	1237149.C900_03482	2.717e-295	914.0	COG1132@1|root,COG1132@2|Bacteria,4NEAG@976|Bacteroidetes,47JVG@768503|Cytophagia	976|Bacteroidetes	V	ABC transporter transmembrane region	-	-	-	ko:K18890	ko02010,map02010	M00707	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.106.13,3.A.1.106.5	-	-	ABC_membrane,ABC_tran
BYD3_k127_4994743_178	1237149.C900_03483	1.835e-82	281.0	COG0101@1|root,COG0101@2|Bacteria,4NFDC@976|Bacteroidetes,47KUM@768503|Cytophagia	976|Bacteroidetes	J	Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs	truA	GO:0001522,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016853,GO:0016866,GO:0031119,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:1901360	5.4.99.12	ko:K06173	-	-	-	-	ko00000,ko01000,ko03016	-	-	-	PseudoU_synth_1
BYD3_k127_4994743_245	1288963.ADIS_3174	2.173e-46	171.0	29WC5@1|root,30HXS@2|Bacteria,4NNWN@976|Bacteroidetes,47SJP@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_4994743_15	1237149.C900_03488	1.013e-314	973.0	COG0326@1|root,COG0326@2|Bacteria,4NDXZ@976|Bacteroidetes,47JAZ@768503|Cytophagia	976|Bacteroidetes	O	Molecular chaperone. Has ATPase activity	htpG	-	-	ko:K04079	ko04141,ko04151,ko04217,ko04612,ko04621,ko04626,ko04657,ko04659,ko04914,ko04915,ko05200,ko05215,ko05418,map04141,map04151,map04217,map04612,map04621,map04626,map04657,map04659,map04914,map04915,map05200,map05215,map05418	-	-	-	ko00000,ko00001,ko01009,ko03029,ko03051,ko03110,ko04131,ko04147	-	-	-	HATPase_c_3,HSP90
BYD3_k127_4994743_141	1237149.C900_01531	1.927e-97	325.0	COG2849@1|root,COG2849@2|Bacteria,4NK1X@976|Bacteroidetes,47NFY@768503|Cytophagia	976|Bacteroidetes	S	repeat protein	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_4994743_120	929562.Emtol_3627	1.904e-113	374.0	COG1171@1|root,COG1171@2|Bacteria,4NEY2@976|Bacteroidetes,47KNZ@768503|Cytophagia	976|Bacteroidetes	E	Pyridoxal-phosphate dependent enzyme	ilvA	-	4.3.1.19	ko:K01754	ko00260,ko00290,ko01100,ko01110,ko01130,ko01200,ko01230,map00260,map00290,map01100,map01110,map01130,map01200,map01230	M00570	R00220,R00996	RC00418,RC02600	ko00000,ko00001,ko00002,ko01000	-	-	-	PALP
BYD3_k127_4994743_14	1237149.C900_00928	1.16e-319	994.0	COG0308@1|root,COG0308@2|Bacteria,4NE13@976|Bacteroidetes,47KCK@768503|Cytophagia	976|Bacteroidetes	E	Aminopeptidase N	-	-	-	-	-	-	-	-	-	-	-	-	Peptidase_M1
BYD3_k127_4994743_17	1237149.C900_00928	3.972e-308	960.0	COG0308@1|root,COG0308@2|Bacteria,4NE13@976|Bacteroidetes,47KCK@768503|Cytophagia	976|Bacteroidetes	E	Aminopeptidase N	-	-	-	-	-	-	-	-	-	-	-	-	Peptidase_M1
BYD3_k127_4994743_191	1237149.C900_00926	3.663e-72	248.0	COG2370@1|root,COG2370@2|Bacteria,4NMRP@976|Bacteroidetes,47MSF@768503|Cytophagia	976|Bacteroidetes	O	HupE / UreJ protein	-	-	-	-	-	-	-	-	-	-	-	-	HupE_UreJ_2
BYD3_k127_4994743_279	760192.Halhy_1493	7.732e-22	102.0	2AE6H@1|root,3140B@2|Bacteria,4NSDV@976|Bacteroidetes,1ITY6@117747|Sphingobacteriia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_4994743_122	1237149.C900_05167	5.961e-113	374.0	COG5504@1|root,COG5504@2|Bacteria,4NFZP@976|Bacteroidetes,47N7G@768503|Cytophagia	976|Bacteroidetes	O	Gliding motility protein, GldB	gldB	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_4994743_145	471854.Dfer_3869	2.995e-95	318.0	COG0149@1|root,COG0149@2|Bacteria,4NE2F@976|Bacteroidetes,47KW6@768503|Cytophagia	976|Bacteroidetes	G	Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P)	tpiA	GO:0003674,GO:0003824,GO:0004807,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006006,GO:0006066,GO:0006071,GO:0006081,GO:0006082,GO:0006090,GO:0006091,GO:0006094,GO:0006096,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0016051,GO:0016052,GO:0016053,GO:0016310,GO:0016853,GO:0016860,GO:0016861,GO:0017144,GO:0018130,GO:0019318,GO:0019319,GO:0019359,GO:0019362,GO:0019363,GO:0019400,GO:0019405,GO:0019438,GO:0019439,GO:0019563,GO:0019637,GO:0019682,GO:0019693,GO:0019751,GO:0019752,GO:0032787,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042866,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044262,GO:0044270,GO:0044271,GO:0044275,GO:0044281,GO:0044282,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046031,GO:0046034,GO:0046164,GO:0046166,GO:0046174,GO:0046184,GO:0046364,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046700,GO:0046939,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0090407,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1901615,GO:1901616	5.3.1.1	ko:K01803	ko00010,ko00051,ko00562,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00051,map00562,map00710,map01100,map01110,map01120,map01130,map01200,map01230	M00001,M00002,M00003	R01015	RC00423	ko00000,ko00001,ko00002,ko01000,ko04147	-	-	-	TIM
BYD3_k127_4994743_157	1124780.ANNU01000015_gene2053	7.784e-91	306.0	COG2264@1|root,COG2264@2|Bacteria,4NFRW@976|Bacteroidetes,47JQR@768503|Cytophagia	976|Bacteroidetes	J	Ribosomal protein L11 methyltransferase	prmA	-	-	ko:K02687	-	-	-	-	ko00000,ko01000,ko03009	-	-	-	PrmA
BYD3_k127_4994743_60	925409.KI911562_gene1598	2.775e-193	610.0	COG2211@1|root,COG2211@2|Bacteria,4NE0X@976|Bacteroidetes,1J0SK@117747|Sphingobacteriia	976|Bacteroidetes	G	Nucleoside H+ symporter	-	-	-	-	-	-	-	-	-	-	-	-	Nuc_H_symport
BYD3_k127_4994743_40	700598.Niako_2203	3.921e-234	726.0	COG0673@1|root,COG0673@2|Bacteria,4NJ92@976|Bacteroidetes,1ISF7@117747|Sphingobacteriia	976|Bacteroidetes	S	Oxidoreductase domain protein	-	-	-	-	-	-	-	-	-	-	-	-	GFO_IDH_MocA,GFO_IDH_MocA_C
BYD3_k127_4994743_140	1121373.KB903620_gene2201	4.805e-100	340.0	COG0438@1|root,COG0438@2|Bacteria,4NI16@976|Bacteroidetes,47KFJ@768503|Cytophagia	976|Bacteroidetes	M	Glycosyl transferase 4-like domain	-	-	-	-	-	-	-	-	-	-	-	-	Glyco_trans_1_4,Glyco_trans_4_4,Glyco_transf_4,Glycos_transf_1
BYD3_k127_4994743_164	929562.Emtol_1110	1.137e-87	293.0	COG2010@1|root,COG2010@2|Bacteria,4PN3J@976|Bacteroidetes,47Y8S@768503|Cytophagia	976|Bacteroidetes	C	Domain of Unknown Function (DUF1080)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1080
BYD3_k127_4994743_161	1237149.C900_01514	1.049e-88	297.0	COG1595@1|root,COG1595@2|Bacteria,4NF93@976|Bacteroidetes,47KW3@768503|Cytophagia	976|Bacteroidetes	K	Belongs to the sigma-70 factor family. ECF subfamily	rpoE	-	-	ko:K03088	-	-	-	-	ko00000,ko03021	-	-	-	Sigma70_r2,Sigma70_r4,Sigma70_r4_2
BYD3_k127_4994743_4	1237149.C900_01516	0.0	1443.0	COG0178@1|root,COG0178@2|Bacteria,4NEHM@976|Bacteroidetes,47JVJ@768503|Cytophagia	976|Bacteroidetes	L	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate	uvrA1	-	-	ko:K03701	ko03420,map03420	-	-	-	ko00000,ko00001,ko03400	-	-	-	AAA_21,ABC_tran
BYD3_k127_4994743_223	1239962.C943_02197	1.7e-56	204.0	COG0702@1|root,COG0702@2|Bacteria	2|Bacteria	GM	epimerase	-	-	-	-	-	-	-	-	-	-	-	-	NAD_binding_10
BYD3_k127_4994743_112	1237149.C900_02106	1.95e-118	391.0	COG0142@1|root,COG0142@2|Bacteria,4NEGQ@976|Bacteroidetes,47JRS@768503|Cytophagia	976|Bacteroidetes	H	Belongs to the FPP GGPP synthase family	idsA	-	2.5.1.1,2.5.1.10,2.5.1.29	ko:K13789	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	M00364,M00366	R01658,R02003,R02061	RC00279	ko00000,ko00001,ko00002,ko01000,ko01006	-	-	-	polyprenyl_synt
BYD3_k127_4994743_20	1237149.C900_02107	2.718e-293	917.0	COG0557@1|root,COG0557@2|Bacteria,4NE7T@976|Bacteroidetes,47JK7@768503|Cytophagia	976|Bacteroidetes	J	3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs	rnr	-	-	ko:K12573,ko:K12585	ko03018,map03018	M00391	-	-	ko00000,ko00001,ko00002,ko01000,ko03016,ko03019	-	-	-	OB_RNB,RNB,S1
BYD3_k127_4994743_174	1237149.C900_02108	2.55e-83	282.0	COG3298@1|root,COG3298@2|Bacteria,4NECH@976|Bacteroidetes,47Y3D@768503|Cytophagia	976|Bacteroidetes	L	Predicted 3'-5' exonuclease related to the exonuclease domain of PolB	-	-	-	ko:K07501	-	-	-	-	ko00000	-	-	-	DNA_pol_B_exo2
BYD3_k127_4994743_239	1237149.C900_02109	1.467e-48	176.0	2AGNU@1|root,316WB@2|Bacteria,4NSNZ@976|Bacteroidetes,47RK1@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_4994743_139	1237149.C900_02110	1.94e-100	332.0	COG0321@1|root,COG0321@2|Bacteria,4NE14@976|Bacteroidetes,47KKV@768503|Cytophagia	976|Bacteroidetes	H	Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate-dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate	lipB	GO:0003674,GO:0003824,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009249,GO:0009987,GO:0010467,GO:0016740,GO:0016746,GO:0016747,GO:0018065,GO:0018193,GO:0018205,GO:0019538,GO:0033819,GO:0036211,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0051604,GO:0071704,GO:1901564	2.3.1.181	ko:K03801	ko00785,ko01100,map00785,map01100	-	R07766,R07769	RC00039,RC00992,RC02867	ko00000,ko00001,ko01000	-	-	-	BPL_LplA_LipB
BYD3_k127_4994743_159	929562.Emtol_1891	1.575e-90	307.0	COG1409@1|root,COG1409@2|Bacteria,4NN8T@976|Bacteroidetes,47PD0@768503|Cytophagia	976|Bacteroidetes	S	Calcineurin-like phosphoesterase	-	-	-	-	-	-	-	-	-	-	-	-	Metallophos
BYD3_k127_4994743_144	1124780.ANNU01000006_gene2828	1.143e-95	328.0	COG2222@1|root,COG2222@2|Bacteria,4NIX0@976|Bacteroidetes,47JG5@768503|Cytophagia	976|Bacteroidetes	M	Bacterial phospho-glucose isomerase C-terminal SIS domain	-	-	5.3.1.8,5.3.1.9	ko:K15916	ko00010,ko00030,ko00051,ko00500,ko00520,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00030,map00051,map00500,map00520,map01100,map01110,map01120,map01130,map01200	M00001,M00004,M00114	R01819,R02739,R02740,R03321	RC00376,RC00563	ko00000,ko00001,ko00002,ko01000	-	-	-	SIS,bact-PGI_C
BYD3_k127_4994743_270	504472.Slin_5877	2.363e-30	123.0	COG0792@1|root,COG0792@2|Bacteria,4NS7E@976|Bacteroidetes,47QW9@768503|Cytophagia	976|Bacteroidetes	L	Belongs to the UPF0102 family	-	-	-	ko:K07460	-	-	-	-	ko00000	-	-	-	UPF0102
BYD3_k127_4994743_12	1124780.ANNU01000016_gene1858	0.0	1035.0	COG0258@1|root,COG0749@1|root,COG0258@2|Bacteria,COG0749@2|Bacteria,4NDVA@976|Bacteroidetes,47KYI@768503|Cytophagia	976|Bacteroidetes	L	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity	polA	-	2.7.7.7	ko:K02335	ko00230,ko00240,ko01100,ko03030,ko03410,ko03420,ko03440,map00230,map00240,map01100,map03030,map03410,map03420,map03440	-	R00375,R00376,R00377,R00378	RC02795	ko00000,ko00001,ko01000,ko03032,ko03400	-	-	-	5_3_exonuc,5_3_exonuc_N,DNA_pol_A,DNA_pol_A_exo1
BYD3_k127_4994743_290	1185876.BN8_01719	1.714e-12	74.0	COG4319@1|root,COG4319@2|Bacteria,4NSA0@976|Bacteroidetes,47RMW@768503|Cytophagia	976|Bacteroidetes	S	SnoaL-like domain	-	-	-	-	-	-	-	-	-	-	-	-	DUF4440
BYD3_k127_4994743_90	929703.KE386491_gene4241	9.979e-146	473.0	COG1092@1|root,COG1092@2|Bacteria,4NG9S@976|Bacteroidetes,47M5H@768503|Cytophagia	976|Bacteroidetes	J	SAM-dependent methyltransferase	rlmI	-	2.1.1.191	ko:K06969	-	-	-	-	ko00000,ko01000,ko03009	-	-	-	Methyltrans_SAM
BYD3_k127_4994743_75	1237149.C900_01547	1.385e-166	537.0	COG0265@1|root,COG0265@2|Bacteria,4NFCS@976|Bacteroidetes,47KF5@768503|Cytophagia	976|Bacteroidetes	O	PDZ domain (Also known as DHR or GLGF)	-	-	-	-	-	-	-	-	-	-	-	-	PDZ_1,PDZ_2,Trypsin_2
BYD3_k127_4994743_63	1237149.C900_00764	2.158e-190	601.0	COG0761@1|root,COG0761@2|Bacteria,4NDUX@976|Bacteroidetes,47M0Y@768503|Cytophagia	976|Bacteroidetes	C	Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis	ispH	-	1.17.7.4	ko:K03527	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	M00096	R05884,R08210	RC01137,RC01487	ko00000,ko00001,ko00002,ko01000	-	-	-	LYTB
BYD3_k127_4994743_283	1484460.JSWG01000006_gene2923	4.143e-18	85.0	2E50X@1|root,32ZUB@2|Bacteria,4NW9R@976|Bacteroidetes,1I57F@117743|Flavobacteriia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_4994743_69	929562.Emtol_2004	1.406e-172	565.0	COG4772@1|root,COG4772@2|Bacteria,4NE9I@976|Bacteroidetes,47M2B@768503|Cytophagia	976|Bacteroidetes	P	TonB-dependent receptor	-	-	-	ko:K02014	-	-	-	-	ko00000,ko02000	1.B.14	-	-	Plug,TonB_dep_Rec
BYD3_k127_4994743_177	1237149.C900_05513	1.229e-82	285.0	COG3001@1|root,COG3001@2|Bacteria,4NEQY@976|Bacteroidetes,47K5K@768503|Cytophagia	976|Bacteroidetes	G	Fructosamine kinase	-	-	-	-	-	-	-	-	-	-	-	-	Fructosamin_kin
BYD3_k127_4994743_89	1237149.C900_00782	4.106e-150	481.0	COG0492@1|root,COG0492@2|Bacteria,4NDVS@976|Bacteroidetes,47MQ3@768503|Cytophagia	976|Bacteroidetes	O	Pyridine nucleotide-disulphide oxidoreductase	ypdA	-	1.8.1.9	ko:K00384	ko00450,map00450	-	R02016,R03596,R09372	RC00013,RC02518,RC02873	ko00000,ko00001,ko01000	-	-	-	Pyr_redox_3
BYD3_k127_4994743_41	926556.Echvi_1296	1.648e-231	725.0	COG0008@1|root,COG0008@2|Bacteria,4NEED@976|Bacteroidetes,47K3J@768503|Cytophagia	976|Bacteroidetes	J	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)	gltX	-	6.1.1.17	ko:K01885	ko00860,ko00970,ko01100,ko01110,ko01120,map00860,map00970,map01100,map01110,map01120	M00121,M00359,M00360	R05578	RC00055,RC00523	ko00000,ko00001,ko00002,ko01000,ko01007,ko02048,ko03016	-	-	-	tRNA-synt_1c
BYD3_k127_4994743_284	1237149.C900_04484	5.171e-18	85.0	2E4W4@1|root,32ZQB@2|Bacteria,4NUZZ@976|Bacteroidetes,47RZI@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_4994743_97	1237149.C900_04485	5.15e-135	433.0	COG2013@1|root,COG2013@2|Bacteria,4NFNA@976|Bacteroidetes,47KS9@768503|Cytophagia	976|Bacteroidetes	S	Mitochondrial biogenesis AIM24	-	-	-	-	-	-	-	-	-	-	-	-	AIM24
BYD3_k127_4994743_80	1237149.C900_04486	5.029e-163	522.0	COG0686@1|root,COG0686@2|Bacteria,4NF46@976|Bacteroidetes,47KRS@768503|Cytophagia	976|Bacteroidetes	E	Alanine dehydrogenase PNT, N-terminal domain	-	-	-	-	-	-	-	-	-	-	-	-	AlaDh_PNT_C,AlaDh_PNT_N
BYD3_k127_4994743_266	1237149.C900_03225	5.275e-32	127.0	2C9BK@1|root,32RP1@2|Bacteria,4NSPA@976|Bacteroidetes,47RVQ@768503|Cytophagia	976|Bacteroidetes	S	Domain of unknown function (DUF4286)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4286
BYD3_k127_4994743_297	1279009.ADICEAN_02251	8.369e-08	57.0	2E46C@1|root,33EHC@2|Bacteria,4NY42@976|Bacteroidetes,47T1K@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_4994743_204	866536.Belba_0607	9.927e-65	228.0	COG0454@1|root,COG0456@2|Bacteria,4NNJS@976|Bacteroidetes,47PUS@768503|Cytophagia	976|Bacteroidetes	K	PFAM Acetyltransferase (GNAT) family	-	-	-	-	-	-	-	-	-	-	-	-	Acetyltransf_1
BYD3_k127_4994743_293	313606.M23134_03477	3.188e-11	70.0	2EEHV@1|root,338BQ@2|Bacteria,4NWH5@976|Bacteroidetes,47SB4@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_4994743_247	1237149.C900_04481	3.777e-46	169.0	COG0251@1|root,COG0251@2|Bacteria,4NQ8M@976|Bacteroidetes,47QE4@768503|Cytophagia	976|Bacteroidetes	J	TIGRFAM endoribonuclease L-PSP	yjgF	-	3.5.99.10	ko:K09022	-	-	R11098,R11099	RC03275,RC03354	ko00000,ko01000	-	-	-	Ribonuc_L-PSP
BYD3_k127_4994743_169	1124780.ANNU01000052_gene3573	7.507e-86	304.0	COG1283@1|root,COG1283@2|Bacteria,4NMSG@976|Bacteroidetes,47UEZ@768503|Cytophagia	976|Bacteroidetes	P	Na+/Pi-cotransporter	-	-	-	-	-	-	-	-	-	-	-	-	Na_Pi_cotrans
BYD3_k127_4994743_292	1237149.C900_04456	1.114e-11	70.0	2DREE@1|root,33BDM@2|Bacteria,4NXHP@976|Bacteroidetes	976|Bacteroidetes	S	Putative Actinobacterial Holin-X, holin superfamily III	-	-	-	-	-	-	-	-	-	-	-	-	Phage_holin_3_6
BYD3_k127_4994743_155	1124780.ANNU01000052_gene3570	5.95e-91	306.0	COG1646@1|root,COG1646@2|Bacteria,4NER8@976|Bacteroidetes,47MXM@768503|Cytophagia	976|Bacteroidetes	I	Prenyltransferase that catalyzes the transfer of the geranylgeranyl moiety of geranylgeranyl diphosphate (GGPP) to the C3 hydroxyl of sn-glycerol-1-phosphate (G1P)	pcrB	-	-	ko:K07094	-	-	-	-	ko00000,ko01000	-	-	-	PcrB
BYD3_k127_4994743_39	1279009.ADICEAN_00512	2.999e-234	739.0	COG0308@1|root,COG0308@2|Bacteria,4NFT0@976|Bacteroidetes,47M3W@768503|Cytophagia	976|Bacteroidetes	E	Leukotriene A4 hydrolase, C-terminal	-	-	-	-	-	-	-	-	-	-	-	-	Leuk-A4-hydro_C,Peptidase_M1
BYD3_k127_4994743_51	1120968.AUBX01000011_gene3159	2.957e-215	676.0	COG1960@1|root,COG1960@2|Bacteria,4NFII@976|Bacteroidetes,47NCG@768503|Cytophagia	976|Bacteroidetes	I	Acyl-CoA dehydrogenase, C-terminal domain	gcdH	-	1.3.8.6	ko:K00252	ko00071,ko00310,ko00362,ko00380,ko01100,ko01120,ko01130,map00071,map00310,map00362,map00380,map01100,map01120,map01130	M00032	R02487,R02488,R10074	RC00052,RC00156	ko00000,ko00001,ko00002,ko01000	-	-	-	Acyl-CoA_dh_1,Acyl-CoA_dh_M,Acyl-CoA_dh_N
BYD3_k127_4994743_262	1237149.C900_03174	1.608e-34	138.0	COG5608@1|root,COG5608@2|Bacteria,4NVQ5@976|Bacteroidetes	976|Bacteroidetes	S	Late embryogenesis abundant protein	-	-	-	-	-	-	-	-	-	-	-	-	LEA_2
BYD3_k127_4994743_200	1124780.ANNU01000043_gene339	6.015e-68	239.0	COG3751@1|root,COG3751@2|Bacteria,4NFPS@976|Bacteroidetes,47MBX@768503|Cytophagia	976|Bacteroidetes	O	Prolyl 4-hydroxylase alpha subunit homologues.	-	-	-	ko:K07394	-	-	-	-	ko00000	-	-	-	2OG-FeII_Oxy_3,2OG-FeII_Oxy_4
BYD3_k127_4994743_268	1237149.C900_00817	1.024e-30	127.0	COG2318@1|root,COG2318@2|Bacteria,4NSE5@976|Bacteroidetes,47S2U@768503|Cytophagia	976|Bacteroidetes	S	DinB family	-	-	-	-	-	-	-	-	-	-	-	-	DinB
BYD3_k127_4994743_125	616991.JPOO01000001_gene4356	3.317e-111	369.0	COG0715@1|root,COG0715@2|Bacteria,4NH2X@976|Bacteroidetes,1HYIQ@117743|Flavobacteriia	976|Bacteroidetes	P	Protein of unknown function (DUF3500)	-	-	-	-	-	-	-	-	-	-	-	-	DUF3500
BYD3_k127_4994743_231	1237149.C900_04496	1.173e-51	188.0	COG3350@1|root,COG3350@2|Bacteria,4NRFU@976|Bacteroidetes,47QIJ@768503|Cytophagia	976|Bacteroidetes	S	monooxygenase activity	-	-	-	-	-	-	-	-	-	-	-	-	YHS
BYD3_k127_4994743_246	1237149.C900_04497	2.409e-46	172.0	COG2318@1|root,COG2318@2|Bacteria,4NSP0@976|Bacteroidetes,47R5Z@768503|Cytophagia	976|Bacteroidetes	S	DinB family	-	-	-	-	-	-	-	-	-	-	-	-	DinB,DinB_2
BYD3_k127_4994743_133	1123277.KB893194_gene5825	8.805e-104	349.0	COG0189@1|root,COG0189@2|Bacteria,4NH4U@976|Bacteroidetes,47MCV@768503|Cytophagia	976|Bacteroidetes	HJ	ligase activity	-	-	-	-	-	-	-	-	-	-	-	-	RimK
BYD3_k127_4994743_229	1237149.C900_04499	4.812e-52	191.0	COG1280@1|root,COG1280@2|Bacteria,4NUV7@976|Bacteroidetes,47SDU@768503|Cytophagia	976|Bacteroidetes	E	LysE type translocator	-	-	-	-	-	-	-	-	-	-	-	-	LysE
BYD3_k127_4994743_78	1237149.C900_00911	7.337e-165	524.0	COG0136@1|root,COG0136@2|Bacteria,4NE4V@976|Bacteroidetes,47JMK@768503|Cytophagia	976|Bacteroidetes	E	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate	asd	-	1.2.1.11	ko:K00133	ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01210,map01230	M00016,M00017,M00018,M00033,M00525,M00526,M00527	R02291	RC00684	ko00000,ko00001,ko00002,ko01000	-	-	-	Semialdhyde_dh,Semialdhyde_dhC
BYD3_k127_4994743_71	1408433.JHXV01000014_gene3642	7.194e-170	565.0	COG4288@1|root,COG4288@2|Bacteria,4NHM6@976|Bacteroidetes,1I8HX@117743|Flavobacteriia,2PAB4@246874|Cryomorphaceae	976|Bacteroidetes	S	Lamin Tail Domain	-	-	-	-	-	-	-	-	-	-	-	-	Big_5,CHU_C,LTD
BYD3_k127_4994743_105	929556.Solca_3257	9.135e-124	407.0	COG1446@1|root,COG1446@2|Bacteria,4NF1U@976|Bacteroidetes,1IQI3@117747|Sphingobacteriia	976|Bacteroidetes	E	Asparaginase	-	-	3.4.19.5	ko:K13051	-	-	-	-	ko00000,ko01000,ko01002	-	-	-	Asparaginase_2
BYD3_k127_4994743_240	1237149.C900_00906	1.534e-48	184.0	COG1734@1|root,COG1734@2|Bacteria,4NNID@976|Bacteroidetes,47Q8I@768503|Cytophagia	976|Bacteroidetes	T	PFAM Prokaryotic dksA traR C4-type zinc finger	-	-	-	-	-	-	-	-	-	-	-	-	zf-dskA_traR
BYD3_k127_4994743_180	1237149.C900_00905	5.999e-82	278.0	COG1386@1|root,COG1386@2|Bacteria,4NPG3@976|Bacteroidetes,47NG4@768503|Cytophagia	976|Bacteroidetes	D	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves	scpB	-	-	ko:K06024	-	-	-	-	ko00000,ko03036	-	-	-	SMC_ScpB
BYD3_k127_4994743_142	313606.M23134_05607	2.993e-96	329.0	COG1187@1|root,COG1187@2|Bacteria,4NEE1@976|Bacteroidetes,47JIE@768503|Cytophagia	976|Bacteroidetes	J	Belongs to the pseudouridine synthase RsuA family	rluB	-	5.4.99.22	ko:K06178	-	-	-	-	ko00000,ko01000,ko03009	-	-	-	PseudoU_synth_2,S4
BYD3_k127_4994743_160	643867.Ftrac_2755	2.056e-89	312.0	COG4251@1|root,COG4251@2|Bacteria	2|Bacteria	T	photoreceptor activity	-	-	2.1.1.80,3.1.1.61	ko:K13924	ko02020,ko02030,map02020,map02030	M00506	-	-	ko00000,ko00001,ko00002,ko01000,ko02022,ko02035	-	-	-	CheB_methylest,CheR,CheR_N,GAF_2,HATPase_c,HisKA,PAS_3,PAS_9,Response_reg,Y_Y_Y
BYD3_k127_4994743_302	1268240.ATFI01000013_gene1178	1.425e-05	47.0	2DR32@1|root,339YJ@2|Bacteria,4NYM3@976|Bacteroidetes	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_4994743_58	1237149.C900_00901	4.701e-194	614.0	COG1150@1|root,COG1150@2|Bacteria,4NF3K@976|Bacteroidetes,47JED@768503|Cytophagia	976|Bacteroidetes	C	4Fe-4S dicluster domain	-	-	-	-	-	-	-	-	-	-	-	-	Fer4_8,Fer4_9
BYD3_k127_4994743_93	1121481.AUAS01000003_gene3908	1.361e-137	441.0	COG0247@1|root,COG0247@2|Bacteria,4NDZS@976|Bacteroidetes,47KRT@768503|Cytophagia	976|Bacteroidetes	C	PFAM Cysteine-rich domain	-	-	-	-	-	-	-	-	-	-	-	-	CCG
BYD3_k127_4994743_250	1237149.C900_00895	4.971e-44	165.0	28NRS@1|root,2ZBQZ@2|Bacteria,4NMM5@976|Bacteroidetes,47RCF@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_4994743_32	1237149.C900_00894	4.347e-253	797.0	COG0457@1|root,COG0823@1|root,COG2885@1|root,COG0457@2|Bacteria,COG0823@2|Bacteria,COG2885@2|Bacteria,4NE6G@976|Bacteroidetes,47JJM@768503|Cytophagia	976|Bacteroidetes	MU	Belongs to the ompA family	pal	-	-	ko:K03640	-	-	-	-	ko00000,ko02000	2.C.1.2	-	-	OmpA,PD40,TPR_16,TPR_2,TPR_8
BYD3_k127_4994743_98	1124780.ANNU01000025_gene3374	2.169e-134	431.0	COG1398@1|root,COG1398@2|Bacteria,4NE0I@976|Bacteroidetes,47KJ0@768503|Cytophagia	976|Bacteroidetes	I	fatty acid desaturase	-	-	1.14.19.1	ko:K00507	ko01040,ko01212,ko03320,ko04152,ko04212,map01040,map01212,map03320,map04152,map04212	-	R02222	RC00917	ko00000,ko00001,ko01000,ko01004	-	-	-	FA_desaturase
BYD3_k127_4994743_210	1237149.C900_01856	1.014e-62	223.0	COG1595@1|root,COG1595@2|Bacteria,4P4V9@976|Bacteroidetes,47XV7@768503|Cytophagia	976|Bacteroidetes	K	Sigma-70 region 2	-	-	-	-	-	-	-	-	-	-	-	-	Sigma70_r2,Sigma70_r4_2
BYD3_k127_4994743_82	1237149.C900_04556	7.353e-161	510.0	COG1398@1|root,COG1398@2|Bacteria,4NJI9@976|Bacteroidetes,47XKP@768503|Cytophagia	976|Bacteroidetes	I	Fatty acid desaturase	-	-	1.14.19.1	ko:K00507	ko01040,ko01212,ko03320,ko04152,ko04212,map01040,map01212,map03320,map04152,map04212	-	R02222	RC00917	ko00000,ko00001,ko01000,ko01004	-	-	-	FA_desaturase
BYD3_k127_4994743_64	761193.Runsl_5035	6.027e-180	571.0	COG0513@1|root,COG0513@2|Bacteria,4NEVI@976|Bacteroidetes,47M80@768503|Cytophagia	976|Bacteroidetes	L	Belongs to the DEAD box helicase family	deaD	-	-	-	-	-	-	-	-	-	-	-	DEAD,Helicase_C
BYD3_k127_4994743_21	471854.Dfer_5310	1.276e-287	903.0	COG4774@1|root,COG4774@2|Bacteria,4PKNF@976|Bacteroidetes,47XXH@768503|Cytophagia	976|Bacteroidetes	P	Carboxypeptidase regulatory-like domain	-	-	-	-	-	-	-	-	-	-	-	-	CarbopepD_reg_2,CarboxypepD_reg,Plug,TonB_dep_Rec
BYD3_k127_4994743_257	743722.Sph21_4523	1.308e-39	155.0	COG0664@1|root,COG0664@2|Bacteria,4NMI9@976|Bacteroidetes,1IYFF@117747|Sphingobacteriia	976|Bacteroidetes	K	Cyclic nucleotide-binding domain	-	-	-	-	-	-	-	-	-	-	-	-	cNMP_binding
BYD3_k127_4994743_7	1237149.C900_04554	0.0	1302.0	COG0249@1|root,COG0249@2|Bacteria,4NEGB@976|Bacteroidetes,47JE2@768503|Cytophagia	976|Bacteroidetes	L	that it carries out the mismatch recognition step. This protein has a weak ATPase activity	mutS	GO:0003674,GO:0003676,GO:0003677,GO:0003684,GO:0003690,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008094,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0030983,GO:0032300,GO:0032991,GO:0033554,GO:0034641,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1990391	-	ko:K03555	ko03430,map03430	-	-	-	ko00000,ko00001,ko03400	-	-	-	MutS_I,MutS_II,MutS_III,MutS_IV,MutS_V
BYD3_k127_4994743_242	1296416.JACB01000003_gene895	1.536e-47	178.0	COG4798@1|root,COG4798@2|Bacteria,4NII9@976|Bacteroidetes,1IJX2@117743|Flavobacteriia,2YJ3P@290174|Aquimarina	976|Bacteroidetes	S	Fibrillarin	-	-	-	-	-	-	-	-	-	-	-	-	Methyltransf_12,Methyltransf_25,Methyltransf_31
BYD3_k127_4994743_208	1121373.KB903637_gene990	5.283e-64	224.0	COG0566@1|root,COG0566@2|Bacteria,4NM8C@976|Bacteroidetes,47PEY@768503|Cytophagia	976|Bacteroidetes	J	PFAM SpoU rRNA Methylase family	spoU	-	-	-	-	-	-	-	-	-	-	-	SpoU_methylase
BYD3_k127_4994743_61	1237149.C900_00890	2.91e-193	609.0	COG0150@1|root,COG0150@2|Bacteria,4NE4E@976|Bacteroidetes,47JG0@768503|Cytophagia	976|Bacteroidetes	F	PFAM AIR synthase related protein	purM	-	6.3.3.1	ko:K01933	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	M00048	R04208	RC01100	ko00000,ko00001,ko00002,ko01000	-	-	-	AIRS,AIRS_C
BYD3_k127_4994743_102	1120971.AUCA01000008_gene1959	9.07e-131	427.0	COG1960@1|root,COG1960@2|Bacteria,1TP57@1239|Firmicutes,4HAKV@91061|Bacilli,277WW@186823|Alicyclobacillaceae	91061|Bacilli	I	Acyl-CoA dehydrogenase, N-terminal domain	acdA	-	1.3.8.1,1.3.8.7	ko:K00248,ko:K00249	ko00071,ko00280,ko00410,ko00640,ko00650,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,ko03320,map00071,map00280,map00410,map00640,map00650,map01100,map01110,map01120,map01130,map01200,map01212,map03320	M00013,M00036,M00087	R00924,R01175,R01178,R01279,R02661,R03172,R03777,R03857,R03990,R04095,R04432,R04751,R04754	RC00052,RC00068,RC00076,RC00095,RC00120,RC00148,RC00246	ko00000,ko00001,ko00002,ko01000	-	-	-	Acyl-CoA_dh_1,Acyl-CoA_dh_M,Acyl-CoA_dh_N
BYD3_k127_4994743_152	1237149.C900_04461	1.462e-91	306.0	COG2738@1|root,COG2738@2|Bacteria,4NDWG@976|Bacteroidetes,47MH4@768503|Cytophagia	976|Bacteroidetes	S	PFAM Peptidase, membrane zinc metallopeptidase	-	-	-	ko:K06973	-	-	-	-	ko00000	-	-	-	Zn_peptidase_2
BYD3_k127_4994743_33	1237149.C900_01022	7.112e-251	797.0	COG4772@1|root,COG4772@2|Bacteria,4PKTE@976|Bacteroidetes,47KHE@768503|Cytophagia	976|Bacteroidetes	P	PFAM TonB-dependent Receptor Plug Domain	-	-	-	ko:K02014	-	-	-	-	ko00000,ko02000	1.B.14	-	-	CarbopepD_reg_2,Plug,TonB_dep_Rec
BYD3_k127_4994743_222	1237149.C900_01020	3.577e-57	203.0	COG4770@1|root,COG4770@2|Bacteria,4NQ86@976|Bacteroidetes,47QC5@768503|Cytophagia	976|Bacteroidetes	I	Acetyl propionyl-CoA carboxylase alpha subunit	-	-	6.4.1.1	ko:K01960	ko00020,ko00620,ko00720,ko01100,ko01120,ko01200,ko01230,map00020,map00620,map00720,map01100,map01120,map01200,map01230	M00173,M00620	R00344	RC00040,RC00367	ko00000,ko00001,ko00002,ko01000	-	-	-	Biotin_lipoyl
BYD3_k127_4994743_114	1237149.C900_01019	2.983e-117	380.0	COG0528@1|root,COG0528@2|Bacteria,4NE8Z@976|Bacteroidetes,47JC6@768503|Cytophagia	976|Bacteroidetes	F	Catalyzes the reversible phosphorylation of UMP to UDP	pyrH	-	2.7.4.22	ko:K09903	ko00240,ko01100,map00240,map01100	-	R00158	RC00002	ko00000,ko00001,ko01000	-	-	-	AA_kinase
BYD3_k127_4994743_192	1237149.C900_01018	4.543e-70	242.0	COG0233@1|root,COG0233@2|Bacteria,4NF95@976|Bacteroidetes,47P9Z@768503|Cytophagia	976|Bacteroidetes	J	Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another	frr	GO:0002181,GO:0002184,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006412,GO:0006415,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016043,GO:0019538,GO:0022411,GO:0032984,GO:0034641,GO:0034645,GO:0043021,GO:0043023,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043624,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044464,GO:0044877,GO:0071704,GO:0071840,GO:1901564,GO:1901566,GO:1901576	-	ko:K02838	-	-	-	-	ko00000,ko03012	-	-	-	RRF
BYD3_k127_4994743_34	1237149.C900_04526	1.676e-250	781.0	COG1530@1|root,COG1530@2|Bacteria,4NED1@976|Bacteroidetes,47KC6@768503|Cytophagia	976|Bacteroidetes	J	ribonuclease, Rne Rng family	rng	-	-	ko:K08301	-	-	-	-	ko00000,ko01000,ko03009,ko03019	-	-	-	RNase_E_G,S1
BYD3_k127_4994743_301	714943.Mucpa_2551	1.017e-05	47.0	2EIUI@1|root,33CJV@2|Bacteria,4NYR6@976|Bacteroidetes	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_4994743_207	1237149.C900_04527	4.151e-64	228.0	COG4235@1|root,COG4235@2|Bacteria,4PMDP@976|Bacteroidetes,47Y29@768503|Cytophagia	976|Bacteroidetes	O	Tetratricopeptide repeat	-	-	-	-	-	-	-	-	-	-	-	-	TPR_19
BYD3_k127_4994743_251	1121373.KB903620_gene2207	9.941e-44	161.0	COG0776@1|root,COG0776@2|Bacteria,4NT0D@976|Bacteroidetes,47QBN@768503|Cytophagia	976|Bacteroidetes	L	Belongs to the bacterial histone-like protein family	hupA	-	-	ko:K03530	-	-	-	-	ko00000,ko03032,ko03036,ko03400	-	-	-	Bac_DNA_binding
BYD3_k127_4994743_129	1237149.C900_04529	3.603e-108	361.0	COG1194@1|root,COG1194@2|Bacteria,4NDZY@976|Bacteroidetes,47KTH@768503|Cytophagia	976|Bacteroidetes	L	A G-specific adenine glycosylase	mutY	-	-	ko:K03575	ko03410,map03410	-	-	-	ko00000,ko00001,ko01000,ko03400	-	-	-	EndIII_4Fe-2S,HhH-GPD,NUDIX_4
BYD3_k127_4994743_219	1237149.C900_04530	4.505e-60	210.0	COG0629@1|root,COG0629@2|Bacteria,4NQBK@976|Bacteroidetes,47QZT@768503|Cytophagia	976|Bacteroidetes	L	Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism	ssb	-	-	ko:K03111	ko03030,ko03430,ko03440,map03030,map03430,map03440	-	-	-	ko00000,ko00001,ko03029,ko03032,ko03400	-	-	-	SSB
BYD3_k127_4994743_175	1237149.C900_04531	6.313e-83	287.0	COG1253@1|root,COG1253@2|Bacteria,4NDZ7@976|Bacteroidetes,47JUX@768503|Cytophagia	976|Bacteroidetes	S	TIGRFAM gliding motility-associated protein GldE	gldE	-	-	-	-	-	-	-	-	-	-	-	CBS,CorC_HlyC,DUF21
BYD3_k127_4994743_187	1237149.C900_04532	5.013e-76	261.0	293VW@1|root,2ZRB2@2|Bacteria,4NMK7@976|Bacteroidetes,47PUM@768503|Cytophagia	976|Bacteroidetes	S	TIGRFAM gliding motility-associated lipoprotein GldD	gldD	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_4994743_163	1237149.C900_03193	8.863e-88	299.0	COG2017@1|root,COG2017@2|Bacteria,4NE32@976|Bacteroidetes,47KZH@768503|Cytophagia	976|Bacteroidetes	G	converts alpha-aldose to the beta-anomer	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_4994743_48	1237149.C900_00754	2.37e-220	691.0	COG0624@1|root,COG0624@2|Bacteria,4NFGE@976|Bacteroidetes,47JN6@768503|Cytophagia	976|Bacteroidetes	E	PFAM Peptidase family M20 M25 M40	dapE	-	-	-	-	-	-	-	-	-	-	-	M20_dimer,Peptidase_M20
BYD3_k127_4994743_74	1237149.C900_04519	1.067e-167	534.0	COG1533@1|root,COG1533@2|Bacteria,4NE62@976|Bacteroidetes,47M4W@768503|Cytophagia	976|Bacteroidetes	L	SMART Elongator protein 3 MiaB NifB	-	-	-	-	-	-	-	-	-	-	-	-	Radical_SAM
BYD3_k127_4994743_158	1121904.ARBP01000028_gene1643	1.131e-90	308.0	COG2515@1|root,COG2515@2|Bacteria,4NEP9@976|Bacteroidetes,47JNZ@768503|Cytophagia	976|Bacteroidetes	E	1-aminocyclopropane-1-carboxylate deaminase	acdS	-	3.5.99.7	ko:K01505	ko00270,map00270	-	R00997	RC00419	ko00000,ko00001,ko01000	-	-	-	PALP
BYD3_k127_4994743_249	926562.Oweho_3286	6.401e-45	169.0	COG1514@1|root,COG1514@2|Bacteria,4NTUH@976|Bacteroidetes,1I48G@117743|Flavobacteriia	976|Bacteroidetes	J	2',5' RNA ligase	-	-	-	-	-	-	-	-	-	-	-	-	2_5_RNA_ligase2
BYD3_k127_4994743_36	485917.Phep_0160	4.482e-249	775.0	COG0114@1|root,COG0114@2|Bacteria,4NEQP@976|Bacteroidetes,1IUVX@117747|Sphingobacteriia	976|Bacteroidetes	C	Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate	fumC	-	4.2.1.2	ko:K01679	ko00020,ko00620,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko04934,ko05200,ko05211,map00020,map00620,map00720,map01100,map01110,map01120,map01130,map01200,map04934,map05200,map05211	M00009,M00011,M00173,M00376	R01082	RC00443	ko00000,ko00001,ko00002,ko01000	-	-	-	FumaraseC_C,Lyase_1
BYD3_k127_4994743_212	1237149.C900_04546	2.219e-62	220.0	2DPU6@1|root,333E2@2|Bacteria,4NW9K@976|Bacteroidetes,47RVJ@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_4994743_52	1124780.ANNU01000016_gene1814	1.483e-209	665.0	COG0608@1|root,COG0608@2|Bacteria,4NDW1@976|Bacteroidetes,47MAC@768503|Cytophagia	976|Bacteroidetes	L	single-stranded-DNA-specific exonuclease RecJ	recJ	-	-	ko:K07462	ko03410,ko03430,ko03440,map03410,map03430,map03440	-	-	-	ko00000,ko00001,ko01000,ko03400	-	-	-	DHH,DHHA1
BYD3_k127_4994743_106	1279009.ADICEAN_01942	3.624e-123	399.0	COG1137@1|root,COG1137@2|Bacteria,4NDUG@976|Bacteroidetes,47KI2@768503|Cytophagia	976|Bacteroidetes	S	ABC transporter	lptB	-	-	ko:K06861	ko02010,map02010	M00320	-	-	ko00000,ko00001,ko00002,ko01000,ko02000	1.B.42.1	-	-	ABC_tran,BCA_ABC_TP_C
BYD3_k127_4994743_31	1237149.C900_04542	6.504e-255	793.0	COG0318@1|root,COG0318@2|Bacteria,4PKJY@976|Bacteroidetes,47KAH@768503|Cytophagia	976|Bacteroidetes	IQ	PFAM GH3 auxin-responsive promoter	-	-	-	-	-	-	-	-	-	-	-	-	GH3
BYD3_k127_4994743_216	1237149.C900_04630	6.229e-61	216.0	COG4843@1|root,COG4843@2|Bacteria,4NRH5@976|Bacteroidetes,47PXG@768503|Cytophagia	976|Bacteroidetes	S	protein conserved in bacteria (DUF2179)	-	-	-	-	-	-	-	-	-	-	-	-	DUF2179
BYD3_k127_4994743_55	1124780.ANNU01000006_gene2919	1.254e-202	639.0	COG1066@1|root,COG1066@2|Bacteria,4NEYA@976|Bacteroidetes,47K0I@768503|Cytophagia	976|Bacteroidetes	O	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function	radA	-	-	ko:K04485	-	-	-	-	ko00000,ko03400	-	-	-	AAA_25,ATPase,ChlI
BYD3_k127_4994743_92	1279009.ADICEAN_00515	8.678e-140	466.0	COG1305@1|root,COG1305@2|Bacteria,4NEKT@976|Bacteroidetes,47NCY@768503|Cytophagia	976|Bacteroidetes	E	Domain of Unknown Function with PDB structure (DUF3857)	-	-	-	-	-	-	-	-	-	-	-	-	DUF3857,DUF3858,Transglut_core
BYD3_k127_4994743_87	1237149.C900_04627	2.865e-153	505.0	COG1305@1|root,COG1305@2|Bacteria,4NE7G@976|Bacteroidetes,47JVH@768503|Cytophagia	976|Bacteroidetes	E	Domain of Unknown Function with PDB structure (DUF3857)	-	-	-	-	-	-	-	-	-	-	-	-	DUF3857,DUF3858,Transglut_core
BYD3_k127_4994743_109	1237149.C900_02854	3.246e-121	394.0	COG0300@1|root,COG0300@2|Bacteria,4NEMK@976|Bacteroidetes,47JGN@768503|Cytophagia	976|Bacteroidetes	S	Belongs to the short-chain dehydrogenases reductases (SDR) family	-	-	-	-	-	-	-	-	-	-	-	-	adh_short
BYD3_k127_4994743_197	269798.CHU_1078	5.422e-69	243.0	COG1560@1|root,COG1560@2|Bacteria,4NGQU@976|Bacteroidetes,47MHM@768503|Cytophagia	976|Bacteroidetes	M	Lipid A biosynthesis acyltransferase	waaM	-	2.3.1.241	ko:K02517	ko00540,ko01100,map00540,map01100	M00060	R05146	RC00037,RC00039	ko00000,ko00001,ko00002,ko01000,ko01005	-	-	-	Lip_A_acyltrans
BYD3_k127_4994743_6	1237149.C900_02745	0.0	1339.0	COG0553@1|root,COG0553@2|Bacteria,4NG6P@976|Bacteroidetes,47JVA@768503|Cytophagia	976|Bacteroidetes	L	PFAM Helicase conserved C-terminal domain	-	-	2.7.11.1	ko:K08282	-	-	-	-	ko00000,ko01000	-	-	-	Helicase_C,SNF2_N
BYD3_k127_4994743_118	1237149.C900_02744	1.124e-113	379.0	COG4591@1|root,COG4591@2|Bacteria,4NG04@976|Bacteroidetes,47M0Q@768503|Cytophagia	976|Bacteroidetes	M	ABC-type transport system involved in lipoprotein release permease component	lolE_2	-	-	ko:K09808,ko:K09815	ko02010,map02010	M00242,M00255	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.125,3.A.1.15.3,3.A.1.15.5	-	-	FtsX,MacB_PCD
BYD3_k127_4994743_253	1237149.C900_02742	3.578e-43	160.0	COG0858@1|root,COG0858@2|Bacteria,4NSQJ@976|Bacteroidetes,47Q35@768503|Cytophagia	976|Bacteroidetes	J	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA	rbfA	-	-	ko:K02834	-	-	-	-	ko00000,ko03009	-	-	-	RBFA
BYD3_k127_4994743_185	1237149.C900_02741	1.012e-76	274.0	28H89@1|root,2Z7K8@2|Bacteria,4NEKX@976|Bacteroidetes,47M3Y@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_4994743_209	714943.Mucpa_2700	2.309e-63	220.0	COG0698@1|root,COG0698@2|Bacteria,4NNSU@976|Bacteroidetes,1IS85@117747|Sphingobacteriia	976|Bacteroidetes	G	Ribose 5-phosphate isomerase	rpiB	-	5.3.1.6	ko:K01808	ko00030,ko00051,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00051,map00710,map01100,map01110,map01120,map01130,map01200,map01230	M00004,M00007,M00165,M00167	R01056,R09030	RC00376,RC00434	ko00000,ko00001,ko00002,ko01000	-	-	-	LacAB_rpiB
BYD3_k127_4994743_136	1237149.C900_02739	4.02e-103	343.0	COG0805@1|root,COG0805@2|Bacteria,4NEKM@976|Bacteroidetes,47KG0@768503|Cytophagia	976|Bacteroidetes	U	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes	tatC	-	-	ko:K03118	ko03060,ko03070,map03060,map03070	M00336	-	-	ko00000,ko00001,ko00002,ko02044	2.A.64	-	-	TatC
BYD3_k127_4994743_45	1237149.C900_02738	2.879e-226	707.0	COG0112@1|root,COG0112@2|Bacteria,4NE30@976|Bacteroidetes,47JWG@768503|Cytophagia	976|Bacteroidetes	E	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism	glyA	-	2.1.2.1	ko:K00600	ko00260,ko00460,ko00630,ko00670,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko01523,map00260,map00460,map00630,map00670,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map01523	M00140,M00141,M00346,M00532	R00945,R09099	RC00022,RC00112,RC01583,RC02958	ko00000,ko00001,ko00002,ko01000	-	-	-	SHMT
BYD3_k127_4994743_44	926549.KI421517_gene931	3.302e-227	721.0	COG4805@1|root,COG4805@2|Bacteria,4NFAK@976|Bacteroidetes,47MIN@768503|Cytophagia	976|Bacteroidetes	S	Bacterial protein of unknown function (DUF885)	-	-	-	-	-	-	-	-	-	-	-	-	DUF885
BYD3_k127_4994743_183	1237149.C900_02736	1.121e-79	276.0	COG1512@1|root,COG1512@2|Bacteria,4NF4P@976|Bacteroidetes,47NDD@768503|Cytophagia	976|Bacteroidetes	S	Beta-propeller domains of methanol dehydrogenase type	-	-	-	ko:K06872	-	-	-	-	ko00000	-	-	-	TPM_phosphatase
BYD3_k127_4994743_243	1232410.KI421421_gene3803	2.081e-47	180.0	COG1512@1|root,COG1512@2|Bacteria,1PB41@1224|Proteobacteria,42R0Q@68525|delta/epsilon subdivisions,2WN87@28221|Deltaproteobacteria,43S55@69541|Desulfuromonadales	28221|Deltaproteobacteria	S	TPM domain	-	-	-	ko:K06872	-	-	-	-	ko00000	-	-	-	TPM_phosphatase
BYD3_k127_4994743_224	1237149.C900_02735	2.8e-55	201.0	COG3762@1|root,COG3762@2|Bacteria	2|Bacteria	S	Membrane	-	-	-	ko:K08988	-	-	-	-	ko00000	-	-	-	TPM_phosphatase
BYD3_k127_4994743_132	1121904.ARBP01000010_gene2300	2.663e-104	348.0	COG0854@1|root,COG0854@2|Bacteria,4NF4Z@976|Bacteroidetes,47K7U@768503|Cytophagia	976|Bacteroidetes	H	Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate	pdxJ	GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006725,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0008614,GO:0008615,GO:0009058,GO:0009110,GO:0009987,GO:0016740,GO:0016769,GO:0017144,GO:0018130,GO:0019438,GO:0033856,GO:0034641,GO:0042364,GO:0042816,GO:0042819,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:0072524,GO:0072525,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901615,GO:1901617	2.6.99.2	ko:K03474	ko00750,ko01100,map00750,map01100	M00124	R05838	RC01476	ko00000,ko00001,ko00002,ko01000	-	-	-	PdxJ
BYD3_k127_4994743_233	643867.Ftrac_1783	2.785e-51	186.0	COG1610@1|root,COG1610@2|Bacteria,4NQFI@976|Bacteroidetes,47QJ2@768503|Cytophagia	976|Bacteroidetes	S	PFAM Yqey-like protein	-	-	-	ko:K09117	-	-	-	-	ko00000	-	-	-	YqeY
BYD3_k127_4994743_287	388413.ALPR1_03935	1.83e-13	77.0	COG1286@1|root,COG1286@2|Bacteria	2|Bacteria	S	toxin biosynthetic process	cvpA	-	-	ko:K03558	-	-	-	-	ko00000	-	-	-	Colicin_V
BYD3_k127_4994743_107	1237149.C900_02728	1.105e-121	396.0	COG2267@1|root,COG2267@2|Bacteria,4NF80@976|Bacteroidetes,47KEX@768503|Cytophagia	976|Bacteroidetes	I	alpha/beta hydrolase fold	pcbD	-	-	-	-	-	-	-	-	-	-	-	Abhydrolase_1
BYD3_k127_4994743_166	1237149.C900_02727	2.674e-87	293.0	COG0517@1|root,COG0517@2|Bacteria,4NF8G@976|Bacteroidetes,47PRP@768503|Cytophagia	976|Bacteroidetes	S	PFAM CBS domain	-	-	-	-	-	-	-	-	-	-	-	-	CBS
BYD3_k127_4994743_126	1237149.C900_02726	4.393e-111	366.0	COG0061@1|root,COG0061@2|Bacteria,4NFG5@976|Bacteroidetes,47KI4@768503|Cytophagia	976|Bacteroidetes	G	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP	nadK	-	2.7.1.23	ko:K00858	ko00760,ko01100,map00760,map01100	-	R00104	RC00002,RC00078	ko00000,ko00001,ko01000	-	-	-	NAD_kinase
BYD3_k127_4994743_123	1237149.C900_02725	1.139e-112	374.0	COG2067@1|root,COG2067@2|Bacteria,4PKQK@976|Bacteroidetes,47XZ1@768503|Cytophagia	976|Bacteroidetes	I	long-chain fatty acid transport protein	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_4994743_167	1237149.C900_02724	3.027e-86	290.0	COG3637@1|root,COG3637@2|Bacteria,4NF6B@976|Bacteroidetes,47PKF@768503|Cytophagia	976|Bacteroidetes	M	Outer membrane protein beta-barrel domain	-	-	-	-	-	-	-	-	-	-	-	-	OMP_b-brl
BYD3_k127_4994743_119	1124780.ANNU01000005_gene2388	1.872e-113	370.0	COG0020@1|root,COG0020@2|Bacteria,4NF2B@976|Bacteroidetes,47MC0@768503|Cytophagia	976|Bacteroidetes	I	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids	uppS	GO:0002094,GO:0003674,GO:0003824,GO:0004659,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006066,GO:0006629,GO:0006720,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0009058,GO:0009987,GO:0016093,GO:0016094,GO:0016740,GO:0016765,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046165,GO:0071704,GO:1901576,GO:1901615,GO:1901617	2.5.1.31	ko:K00806	ko00900,ko01110,map00900,map01110	-	R06447	RC00279,RC02839	ko00000,ko00001,ko01000,ko01006	-	-	-	Prenyltransf
BYD3_k127_4994743_9	1237149.C900_02722	0.0	1126.0	COG4775@1|root,COG4775@2|Bacteria,4NE6Z@976|Bacteroidetes,47JEC@768503|Cytophagia	976|Bacteroidetes	M	Outer membrane protein assembly complex, YaeT protein	yaeT	-	-	ko:K07277	-	-	-	-	ko00000,ko02000,ko03029	1.B.33	-	-	Bac_surface_Ag,POTRA
BYD3_k127_4994743_193	1237149.C900_02721	1.54e-69	239.0	COG2825@1|root,COG2825@2|Bacteria,4NH46@976|Bacteroidetes,47PD1@768503|Cytophagia	976|Bacteroidetes	M	PFAM Outer membrane protein (OmpH-like)	skp	-	-	ko:K06142	-	-	-	-	ko00000	-	-	-	OmpH
BYD3_k127_4994743_234	1237149.C900_02720	6.277e-51	186.0	COG2825@1|root,COG2825@2|Bacteria,4NQHJ@976|Bacteroidetes,47QWE@768503|Cytophagia	976|Bacteroidetes	M	PFAM Outer membrane protein (OmpH-like)	ompH	-	-	ko:K06142	-	-	-	-	ko00000	-	-	-	OmpH
BYD3_k127_4994743_168	1237149.C900_02719	4.647e-86	293.0	COG1619@1|root,COG1619@2|Bacteria,4NF5Q@976|Bacteroidetes,47KS4@768503|Cytophagia	976|Bacteroidetes	V	peptidase U61 LD-carboxypeptidase A	ykfA	-	3.4.17.13	ko:K01297	-	-	-	-	ko00000,ko01000,ko01002,ko01011	-	-	-	Peptidase_S66
BYD3_k127_4994743_101	926562.Oweho_0064	4.253e-131	430.0	COG2081@1|root,COG2081@2|Bacteria,4NFME@976|Bacteroidetes,1HWY6@117743|Flavobacteriia,2PAHH@246874|Cryomorphaceae	976|Bacteroidetes	S	HI0933-like protein	yhiN	-	-	ko:K07007	-	-	-	-	ko00000	-	-	-	HI0933_like
BYD3_k127_4994743_146	1124780.ANNU01000005_gene2534	1.558e-94	323.0	COG0742@1|root,COG0742@2|Bacteria,4NG6E@976|Bacteroidetes,47YDK@768503|Cytophagia	976|Bacteroidetes	L	Psort location Cytoplasmic, score 8.96	-	-	-	-	-	-	-	-	-	-	-	-	Cons_hypoth95,PCMT
BYD3_k127_4994743_289	761193.Runsl_4392	1.016e-12	76.0	COG0526@1|root,COG0526@2|Bacteria,4NV2M@976|Bacteroidetes,47X7E@768503|Cytophagia	976|Bacteroidetes	CO	AhpC/TSA family	-	-	-	-	-	-	-	-	-	-	-	-	AhpC-TSA,Thioredoxin_2
BYD3_k127_4994743_8	886377.Murru_1647	0.0	1177.0	COG1197@1|root,COG1197@2|Bacteria,4NEPA@976|Bacteroidetes,1HWS4@117743|Flavobacteriia	976|Bacteroidetes	L	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site	mfd	-	-	ko:K03723	ko03420,map03420	-	-	-	ko00000,ko00001,ko01000,ko03400	-	-	-	CarD_CdnL_TRCF,DEAD,Helicase_C,TRCF
BYD3_k127_4994743_43	1237149.C900_00922	1.921e-227	708.0	COG1262@1|root,COG1262@2|Bacteria,4NE51@976|Bacteroidetes,47JSB@768503|Cytophagia	976|Bacteroidetes	S	TIGRFAM gliding motility-associated lipoprotein GldJ	gldJ	-	-	-	-	-	-	-	-	-	-	-	FGE-sulfatase
BYD3_k127_4994743_196	1237149.C900_03433	3.663e-69	241.0	COG1040@1|root,COG1040@2|Bacteria,4NNI1@976|Bacteroidetes,47PYN@768503|Cytophagia	976|Bacteroidetes	S	TIGRFAM comF family protein	comF	-	2.4.2.14	ko:K00764	ko00230,ko00250,ko01100,ko01110,ko01130,map00230,map00250,map01100,map01110,map01130	M00048	R01072	RC00010,RC02724,RC02752	ko00000,ko00001,ko00002,ko01000,ko01002	-	-	-	Pribosyltran
BYD3_k127_4994743_225	1237149.C900_03435	3.687e-55	198.0	29D8R@1|root,3006P@2|Bacteria,4NNGD@976|Bacteroidetes,47R44@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_4994743_24	1237149.C900_03437	1.226e-276	887.0	COG1196@1|root,COG1196@2|Bacteria,4NF7P@976|Bacteroidetes,47NNE@768503|Cytophagia	976|Bacteroidetes	D	nuclear chromosome segregation	-	-	-	-	-	-	-	-	-	-	-	-	DUF4175
BYD3_k127_4994743_199	1237149.C900_03438	5.725e-68	233.0	COG2172@1|root,COG2172@2|Bacteria,4NRAA@976|Bacteroidetes,47QUX@768503|Cytophagia	976|Bacteroidetes	T	PFAM Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase	rsbW	-	2.7.11.1	ko:K04757	-	-	-	-	ko00000,ko01000,ko01001,ko03021	-	-	-	HATPase_c_2
BYD3_k127_4994743_252	714943.Mucpa_3517	1.742e-43	162.0	COG0319@1|root,COG0319@2|Bacteria,4NS93@976|Bacteroidetes,1ISZQ@117747|Sphingobacteriia	976|Bacteroidetes	S	Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA	ybeY	-	-	-	-	-	-	-	-	-	-	-	UPF0054
BYD3_k127_4994743_16	1237149.C900_03440	1.515e-309	957.0	COG0445@1|root,COG0445@2|Bacteria,4NFNH@976|Bacteroidetes,47JCG@768503|Cytophagia	976|Bacteroidetes	D	NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34	gidA	GO:0000166,GO:0001510,GO:0002097,GO:0002098,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0048037,GO:0050660,GO:0050662,GO:0071704,GO:0090304,GO:0097159,GO:1901265,GO:1901360,GO:1901363	-	ko:K03495	-	-	R08701	RC00053,RC00209,RC00870	ko00000,ko03016,ko03036	-	-	-	GIDA,GIDA_assoc
BYD3_k127_4994743_186	1237149.C900_03441	2.939e-76	265.0	COG2227@1|root,COG2227@2|Bacteria,4NGVF@976|Bacteroidetes,47K52@768503|Cytophagia	976|Bacteroidetes	H	Methyltransferase type 11	-	-	-	-	-	-	-	-	-	-	-	-	Methyltransf_23
BYD3_k127_4994743_110	1237149.C900_03442	9.662e-121	408.0	COG4704@1|root,COG4704@2|Bacteria,4NGPF@976|Bacteroidetes,47KXU@768503|Cytophagia	976|Bacteroidetes	S	Bacterial Ig-like domain	-	-	-	-	-	-	-	-	-	-	-	-	Big_5,fn3_3
BYD3_k127_4994743_57	1237149.C900_03443	1.729e-198	636.0	COG1729@1|root,COG1729@2|Bacteria,4PKMW@976|Bacteroidetes,47JRZ@768503|Cytophagia	976|Bacteroidetes	S	Tetratricopeptide repeat	-	-	-	-	-	-	-	-	-	-	-	-	TPR_16,TPR_6,TPR_8
BYD3_k127_4994743_10	388413.ALPR1_04278	0.0	1063.0	COG2091@1|root,COG2091@2|Bacteria,4NFQ6@976|Bacteroidetes,47JK5@768503|Cytophagia	976|Bacteroidetes	H	lysine biosynthetic process via aminoadipic acid	-	-	-	-	-	-	-	-	-	-	-	-	CBM9_1
BYD3_k127_4994743_228	1000565.METUNv1_00704	4.622e-54	194.0	COG2258@1|root,COG2258@2|Bacteria,1RH4S@1224|Proteobacteria,2VRI3@28216|Betaproteobacteria,2KXIU@206389|Rhodocyclales	206389|Rhodocyclales	S	MOSC domain	-	-	-	-	-	-	-	-	-	-	-	-	MOSC
BYD3_k127_4994743_221	1237149.C900_04652	3.137e-58	206.0	COG1846@1|root,COG1846@2|Bacteria,4NNK7@976|Bacteroidetes,47QHS@768503|Cytophagia	976|Bacteroidetes	K	Transcriptional regulator, MarR family	-	-	-	-	-	-	-	-	-	-	-	-	MarR
BYD3_k127_4994743_29	1237149.C900_04651	7.232e-258	803.0	COG1024@1|root,COG1250@1|root,COG1024@2|Bacteria,COG1250@2|Bacteria,4NF9D@976|Bacteroidetes,47ME4@768503|Cytophagia	976|Bacteroidetes	I	3-hydroxyacyl-CoA dehydrogenase	fadN	-	1.1.1.35	ko:K07516	ko00071,ko00362,ko00650,ko01100,ko01120,ko01200,ko01212,map00071,map00362,map00650,map01100,map01120,map01200,map01212	M00087	R01975,R04737,R04739,R04741,R04743,R04745,R04748,R05305	RC00029,RC00117	ko00000,ko00001,ko00002,ko01000	-	-	-	3HCDH,3HCDH_N,ECH_1
BYD3_k127_5118706_1	929703.KE386491_gene26	5.379e-56	201.0	COG2010@1|root,COG2010@2|Bacteria,4NHQV@976|Bacteroidetes,47N6X@768503|Cytophagia	976|Bacteroidetes	C	Cytochrome c	-	-	-	-	-	-	-	-	-	-	-	-	Cytochrom_C
BYD3_k127_5118706_3	1122927.KB895413_gene1861	1.706e-43	167.0	COG0702@1|root,COG0702@2|Bacteria,1TS7J@1239|Firmicutes,4HFT3@91061|Bacilli,26V10@186822|Paenibacillaceae	91061|Bacilli	GM	NmrA-like family	-	-	-	-	-	-	-	-	-	-	-	-	NAD_binding_10
BYD3_k127_5118706_0	1267534.KB906754_gene3341	2.569e-69	247.0	COG1595@1|root,COG1595@2|Bacteria,3Y5BP@57723|Acidobacteria	57723|Acidobacteria	K	Sigma-70 region 2	-	-	-	-	-	-	-	-	-	-	-	-	Sigma70_r2,Sigma70_r4_2
BYD3_k127_5118706_5	509635.N824_22860	3.811e-14	78.0	2F8R9@1|root,3413H@2|Bacteria,4P4N0@976|Bacteroidetes,1IY8K@117747|Sphingobacteriia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_5118706_4	1089547.KB913013_gene3993	3.265e-26	117.0	COG2834@1|root,COG2834@2|Bacteria,4NHV3@976|Bacteroidetes,47K73@768503|Cytophagia	976|Bacteroidetes	M	Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4292,LolA_like
BYD3_k127_5118706_2	471854.Dfer_5277	1.176e-53	196.0	COG0346@1|root,COG0346@2|Bacteria,4NZS3@976|Bacteroidetes,47WFG@768503|Cytophagia	976|Bacteroidetes	E	lactoylglutathione lyase activity	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_5224321_4	402777.KB235898_gene5158	7.834e-132	431.0	COG0438@1|root,COG0438@2|Bacteria,1G4NH@1117|Cyanobacteria,1H7W9@1150|Oscillatoriales	1117|Cyanobacteria	M	Glycosyl transferases group 1	-	-	-	-	-	-	-	-	-	-	-	-	Glyco_trans_1_4
BYD3_k127_5224321_2	1123248.KB893315_gene3179	3.217e-184	582.0	COG0438@1|root,COG0562@1|root,COG0438@2|Bacteria,COG0562@2|Bacteria,4NHW3@976|Bacteroidetes,1IQZA@117747|Sphingobacteriia	976|Bacteroidetes	M	Glycosyl transferases group 1	-	-	-	-	-	-	-	-	-	-	-	-	Glyco_trans_1_4
BYD3_k127_5224321_3	1123248.KB893315_gene3180	4.755e-156	503.0	COG1091@1|root,COG2723@1|root,COG1091@2|Bacteria,COG2723@2|Bacteria,4NKGQ@976|Bacteroidetes	976|Bacteroidetes	G	Glycosyl hydrolase family 1	-	-	1.1.1.133	ko:K00067	ko00521,ko00523,ko01130,map00521,map00523,map01130	M00793	R02777	RC00182	ko00000,ko00001,ko00002,ko01000	-	-	-	Glyco_hydro_1,RmlD_sub_bind
BYD3_k127_5224321_7	1279009.ADICEAN_00025	1.784e-33	131.0	2E3Q4@1|root,32YN3@2|Bacteria,4NVYD@976|Bacteroidetes,47RSR@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_5224321_6	1408473.JHXO01000013_gene555	2.749e-36	143.0	COG4635@1|root,COG4635@2|Bacteria,4NWH9@976|Bacteroidetes,2FVMK@200643|Bacteroidia	976|Bacteroidetes	CH	Flavodoxin domain	-	-	1.3.5.3	ko:K00230	ko00860,ko01100,ko01110,map00860,map01100,map01110	M00121	R09489	RC00885	ko00000,ko00001,ko00002,ko01000	-	-	-	Flavodoxin_5
BYD3_k127_5224321_5	1379698.RBG1_1C00001G1681	4.879e-55	204.0	COG0657@1|root,COG0657@2|Bacteria	2|Bacteria	I	acetylesterase activity	-	-	-	-	-	-	-	-	-	-	-	-	Abhydrolase_3,Beta_helix,DLH,Peptidase_S9
BYD3_k127_5224321_0	1123277.KB893244_gene5195	4.351e-265	824.0	COG3507@1|root,COG3507@2|Bacteria,4NEVJ@976|Bacteroidetes,47JBZ@768503|Cytophagia	976|Bacteroidetes	G	Belongs to the glycosyl hydrolase 43 family	-	-	-	-	-	-	-	-	-	-	-	-	CBM9_1,CBM_6,Glyco_hydro_43
BYD3_k127_5224321_1	1185876.BN8_00711	2.608e-186	589.0	COG2382@1|root,COG2382@2|Bacteria,4NHSA@976|Bacteroidetes,47MHN@768503|Cytophagia	976|Bacteroidetes	P	Putative esterase	-	-	-	ko:K07214	-	-	-	-	ko00000	-	-	-	CBM_48,Esterase
BYD3_k127_5224321_8	760192.Halhy_0495	2.055e-15	78.0	COG3828@1|root,COG3828@2|Bacteria	2|Bacteria	N	Trehalose utilisation	-	-	-	-	-	-	-	-	-	-	-	-	ThuA
BYD3_k127_531344_1	616991.JPOO01000003_gene582	0.0007936	44.0	COG4654@1|root,COG4654@2|Bacteria,4NRRQ@976|Bacteroidetes,1I7PA@117743|Flavobacteriia	976|Bacteroidetes	C	Cytochrome c, class I	-	-	-	ko:K08738	ko00920,ko01100,ko01120,ko01524,ko02020,ko04115,ko04210,ko04214,ko04215,ko04932,ko05010,ko05012,ko05014,ko05016,ko05134,ko05145,ko05152,ko05161,ko05164,ko05167,ko05168,ko05200,ko05210,ko05222,ko05416,map00920,map01100,map01120,map01524,map02020,map04115,map04210,map04214,map04215,map04932,map05010,map05012,map05014,map05016,map05134,map05145,map05152,map05161,map05164,map05167,map05168,map05200,map05210,map05222,map05416	M00595	R10151	RC03151,RC03152	ko00000,ko00001,ko00002	3.D.4.6	-	-	-
BYD3_k127_531344_0	1123248.KB893370_gene5134	5.094e-244	761.0	COG1231@1|root,COG1231@2|Bacteria,4NH02@976|Bacteroidetes	976|Bacteroidetes	E	Flavin containing amine oxidoreductase	-	-	1.4.3.4	ko:K00274	ko00260,ko00330,ko00340,ko00350,ko00360,ko00380,ko00950,ko00982,ko01100,ko01110,ko04726,ko04728,ko05030,ko05031,ko05034,map00260,map00330,map00340,map00350,map00360,map00380,map00950,map00982,map01100,map01110,map04726,map04728,map05030,map05031,map05034	M00135	R02173,R02382,R02529,R02532,R02613,R02908,R02919,R04025,R04300,R04674,R04890,R04893,R04894,R04907,R04908,R08346,R08347,R08348,R11354	RC00062,RC00160,RC00225,RC00676,RC00807,RC00808,RC01808,RC02226,RC02713	ko00000,ko00001,ko00002,ko01000	-	-	-	Amino_oxidase
BYD3_k127_5315263_8	1237149.C900_01418	2.151e-98	327.0	COG0013@1|root,COG0013@2|Bacteria,4NFHW@976|Bacteroidetes,47KKH@768503|Cytophagia	976|Bacteroidetes	J	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain	alaS	GO:0003674,GO:0003824,GO:0004812,GO:0004813,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006412,GO:0006418,GO:0006419,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016597,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0031406,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0036094,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043177,GO:0043412,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576	6.1.1.7	ko:K01872	ko00970,map00970	M00359,M00360	R03038	RC00055,RC00523	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	-	-	-	DHHA1,tRNA-synt_2c,tRNA_SAD
BYD3_k127_5315263_1	153721.MYP_2222	1.564e-221	696.0	COG0064@1|root,COG0064@2|Bacteria,4NF3B@976|Bacteroidetes,47K7E@768503|Cytophagia	976|Bacteroidetes	J	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)	gatB	-	6.3.5.6,6.3.5.7	ko:K02434	ko00970,ko01100,map00970,map01100	-	R03905,R04212	RC00010	ko00000,ko00001,ko01000,ko03029	-	-	-	GatB_N,GatB_Yqey
BYD3_k127_5315263_6	1237149.C900_01420	2.793e-101	344.0	COG0526@1|root,COG0526@2|Bacteria,4NEX3@976|Bacteroidetes,47JZP@768503|Cytophagia	976|Bacteroidetes	O	PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen	ccmG	-	-	-	-	-	-	-	-	-	-	-	AhpC-TSA,DUF4369
BYD3_k127_5315263_13	1123400.KB904747_gene458	8.03e-34	140.0	COG0726@1|root,COG0726@2|Bacteria,1NHC2@1224|Proteobacteria	1224|Proteobacteria	G	Protein of unknown function (DUF3298)	yjeA	-	-	-	-	-	-	-	-	-	-	-	DUF3298,DUF4163
BYD3_k127_5315263_4	468059.AUHA01000003_gene1640	9.766e-114	384.0	COG2885@1|root,COG2885@2|Bacteria,4NE8J@976|Bacteroidetes,1IPSE@117747|Sphingobacteriia	976|Bacteroidetes	M	Belongs to the ompA family	-	-	-	-	-	-	-	-	-	-	-	-	OMP_b-brl,OmpA,TSP_3
BYD3_k127_5315263_5	269798.CHU_0458	2.075e-102	341.0	COG1597@1|root,COG1597@2|Bacteria,4NJ68@976|Bacteroidetes,47MQA@768503|Cytophagia	976|Bacteroidetes	I	PFAM Diacylglycerol kinase, catalytic	-	-	-	-	-	-	-	-	-	-	-	-	DAGK_cat
BYD3_k127_5315263_7	269798.CHU_0457	1.068e-100	337.0	COG4850@1|root,COG4850@2|Bacteria,4NFZ6@976|Bacteroidetes,47N06@768503|Cytophagia	976|Bacteroidetes	S	Uncharacterized conserved protein (DUF2183)	-	-	-	-	-	-	-	-	-	-	-	-	DUF2183
BYD3_k127_5315263_15	1144313.PMI10_01029	0.0001212	48.0	2DH3E@1|root,2ZY91@2|Bacteria,4PCT3@976|Bacteroidetes,1IN5Q@117743|Flavobacteriia,2NXXT@237|Flavobacterium	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_5315263_11	1408473.JHXO01000009_gene3310	1.736e-81	287.0	COG0612@1|root,COG0612@2|Bacteria,4NHQP@976|Bacteroidetes	976|Bacteroidetes	S	Peptidase M16 inactive domain	-	-	-	-	-	-	-	-	-	-	-	-	Peptidase_M16,Peptidase_M16_C
BYD3_k127_5315263_2	1408473.JHXO01000009_gene3309	6.273e-160	518.0	COG0612@1|root,COG0612@2|Bacteria,4NIQM@976|Bacteroidetes	976|Bacteroidetes	S	Insulinase (Peptidase family M16)	-	-	-	-	-	-	-	-	-	-	-	-	Peptidase_M16,Peptidase_M16_C
BYD3_k127_5315263_12	1121481.AUAS01000002_gene3264	1.388e-62	223.0	28PRQ@1|root,2ZCDG@2|Bacteria,4NWY7@976|Bacteroidetes,47SAI@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_5315263_0	926562.Oweho_1053	5.475e-249	781.0	COG1164@1|root,COG1164@2|Bacteria,4NJFW@976|Bacteroidetes,1I88A@117743|Flavobacteriia	976|Bacteroidetes	E	Angiotensin-converting enzyme	-	-	3.4.15.1	ko:K01283	ko04614,ko04924,ko05142,ko05410,map04614,map04924,map05142,map05410	-	-	-	ko00000,ko00001,ko01000,ko01002,ko04090,ko04147	-	-	-	Peptidase_M2
BYD3_k127_5315263_10	761193.Runsl_4834	5.819e-84	284.0	COG2755@1|root,COG2755@2|Bacteria,4NHWJ@976|Bacteroidetes,47NGU@768503|Cytophagia	976|Bacteroidetes	E	lipolytic protein G-D-S-L family	-	-	-	-	-	-	-	-	-	-	-	-	Lipase_GDSL_2
BYD3_k127_5315263_9	493475.GARC_4526	2.141e-90	303.0	COG0730@1|root,COG0730@2|Bacteria,1MVY3@1224|Proteobacteria,1S21M@1236|Gammaproteobacteria,467A8@72275|Alteromonadaceae	1236|Gammaproteobacteria	S	Sulfite exporter TauE/SafE	-	-	-	ko:K07090	-	-	-	-	ko00000	-	-	-	TauE
BYD3_k127_5315263_3	1267535.KB906767_gene4768	5.229e-151	491.0	2DBP2@1|root,2ZA71@2|Bacteria	2|Bacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_5315263_14	1237149.C900_04428	5.561e-29	118.0	COG1695@1|root,COG1695@2|Bacteria,4P48E@976|Bacteroidetes,47V9J@768503|Cytophagia	976|Bacteroidetes	K	Transcriptional regulator PadR-like family	-	-	-	-	-	-	-	-	-	-	-	-	PadR
BYD3_k127_5333484_15	1273538.G159_04950	8.44e-11	71.0	2DBV7@1|root,2ZB9P@2|Bacteria,1UBN2@1239|Firmicutes,4HEYF@91061|Bacilli,26GJQ@186818|Planococcaceae	91061|Bacilli	S	Domain of unknown function (DUF4386)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4386
BYD3_k127_5333484_8	1227487.C474_16159	7.119e-73	266.0	arCOG02521@1|root,arCOG02521@2157|Archaea,2XVSU@28890|Euryarchaeota,23UVK@183963|Halobacteria	183963|Halobacteria	S	Glycosyl hydrolases family 28	-	-	-	-	-	-	-	-	-	-	-	-	Glyco_hydro_28
BYD3_k127_5333484_1	929556.Solca_0753	7.918e-151	479.0	COG0500@1|root,COG2226@2|Bacteria,4NFRD@976|Bacteroidetes,1IVKT@117747|Sphingobacteriia	976|Bacteroidetes	Q	PFAM Methyltransferase	-	-	-	-	-	-	-	-	-	-	-	-	Methyltransf_11,Methyltransf_25
BYD3_k127_5333484_13	1317122.ATO12_16345	2.311e-39	151.0	COG3324@1|root,COG3324@2|Bacteria,4NMFV@976|Bacteroidetes,1I2RH@117743|Flavobacteriia,2YI00@290174|Aquimarina	976|Bacteroidetes	S	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily	-	-	-	ko:K06996	-	-	-	-	ko00000	-	-	-	Glyoxalase
BYD3_k127_5333484_5	391587.KAOT1_19047	1.593e-99	333.0	COG2207@1|root,COG2207@2|Bacteria,4NHA5@976|Bacteroidetes,1I053@117743|Flavobacteriia	976|Bacteroidetes	K	helix_turn_helix, arabinose operon control protein	-	-	-	-	-	-	-	-	-	-	-	-	HTH_18
BYD3_k127_5333484_6	445961.IW15_17840	5.266e-86	295.0	COG2207@1|root,COG2207@2|Bacteria,4NPUS@976|Bacteroidetes,1I4HZ@117743|Flavobacteriia,3ZPFE@59732|Chryseobacterium	976|Bacteroidetes	K	AraC family transcriptional regulator	-	-	-	-	-	-	-	-	-	-	-	-	AraC_binding,HTH_18
BYD3_k127_5333484_2	1443665.JACA01000003_gene840	2.616e-135	449.0	COG1680@1|root,COG1680@2|Bacteria,4NI1Z@976|Bacteroidetes,1HYQF@117743|Flavobacteriia,2YI41@290174|Aquimarina	976|Bacteroidetes	V	Beta-lactamase	-	-	-	-	-	-	-	-	-	-	-	-	Beta-lactamase,DUF3471
BYD3_k127_5333484_9	929556.Solca_3822	3.265e-59	210.0	COG1522@1|root,COG1522@2|Bacteria,4NR3Z@976|Bacteroidetes,1ITIE@117747|Sphingobacteriia	976|Bacteroidetes	K	helix_turn_helix ASNC type	-	-	-	-	-	-	-	-	-	-	-	-	AsnC_trans_reg,HTH_24,HTH_AsnC-type
BYD3_k127_5333484_0	1121285.AUFK01000001_gene1961	8.284e-153	492.0	COG1680@1|root,COG1680@2|Bacteria,4NGXR@976|Bacteroidetes,1HXN3@117743|Flavobacteriia,3ZRAT@59732|Chryseobacterium	976|Bacteroidetes	V	Beta-lactamase	-	-	-	-	-	-	-	-	-	-	-	-	Beta-lactamase
BYD3_k127_5333484_7	929562.Emtol_1094	8.647e-83	286.0	COG2021@1|root,COG2021@2|Bacteria,4NHJ4@976|Bacteroidetes,47NTI@768503|Cytophagia	976|Bacteroidetes	E	alpha/beta hydrolase fold	-	-	2.3.1.31	ko:K00641	ko00270,ko01100,ko01130,map00270,map01100,map01130	-	R01776	RC00004,RC00041	ko00000,ko00001,ko01000	-	-	-	Abhydrolase_1
BYD3_k127_5333484_3	1185876.BN8_03010	1.764e-109	362.0	COG1082@1|root,COG1082@2|Bacteria,4NJF5@976|Bacteroidetes,47MRZ@768503|Cytophagia	976|Bacteroidetes	G	Xylose isomerase-like TIM barrel	-	-	4.2.1.44	ko:K03335	ko00562,ko01100,ko01120,map00562,map01100,map01120	-	R02782,R05659	RC00782,RC01448	ko00000,ko00001,ko01000	-	-	-	AP_endonuc_2
BYD3_k127_5333484_4	1317122.ATO12_02465	1.215e-105	368.0	COG1680@1|root,COG1680@2|Bacteria,4NG6Z@976|Bacteroidetes,1HZ72@117743|Flavobacteriia,2YJIU@290174|Aquimarina	976|Bacteroidetes	V	Beta-lactamase	-	-	-	-	-	-	-	-	-	-	-	-	Beta-lactamase
BYD3_k127_5333484_10	1123073.KB899241_gene2644	9.588e-47	191.0	COG2819@1|root,COG2819@2|Bacteria,1R9SG@1224|Proteobacteria,1T1D1@1236|Gammaproteobacteria,1X6IU@135614|Xanthomonadales	135614|Xanthomonadales	S	Putative esterase	-	-	-	ko:K07017	-	-	-	-	ko00000	-	-	-	Esterase
BYD3_k127_5333484_11	1121904.ARBP01000008_gene3400	5.593e-44	162.0	COG1695@1|root,COG1695@2|Bacteria,4NQJP@976|Bacteroidetes,47QWB@768503|Cytophagia	2|Bacteria	K	Transcriptional regulator PadR-like family	-	-	-	-	-	-	-	-	-	-	-	-	PadR
BYD3_k127_5333484_12	1121904.ARBP01000008_gene3401	3.584e-43	163.0	COG0577@1|root,COG0577@2|Bacteria,4NDUK@976|Bacteroidetes,47JJN@768503|Cytophagia	976|Bacteroidetes	V	FtsX-like permease family	-	-	-	-	-	-	-	-	-	-	-	-	FtsX,MacB_PCD
BYD3_k127_5357574_10	760192.Halhy_0383	1.289e-12	67.0	COG2318@1|root,COG2318@2|Bacteria,4NN7V@976|Bacteroidetes,1IY66@117747|Sphingobacteriia	976|Bacteroidetes	S	DinB family	-	-	-	-	-	-	-	-	-	-	-	-	DinB,DinB_2
BYD3_k127_5357574_1	391603.FBALC1_08003	2.94e-88	308.0	COG1680@1|root,COG1729@1|root,COG1680@2|Bacteria,COG1729@2|Bacteria,4NI1Z@976|Bacteroidetes,1HYQF@117743|Flavobacteriia	976|Bacteroidetes	V	COG1680 Beta-lactamase class C and other penicillin binding proteins	-	-	-	-	-	-	-	-	-	-	-	-	Beta-lactamase,DUF3471
BYD3_k127_5357574_9	880070.Cycma_1550	4.469e-13	69.0	COG3549@1|root,COG3549@2|Bacteria,4NSZ2@976|Bacteroidetes,47RJA@768503|Cytophagia	976|Bacteroidetes	S	PFAM Plasmid maintenance system killer	-	-	-	ko:K07334	-	-	-	-	ko00000,ko02048	-	-	-	HigB-like_toxin
BYD3_k127_5357574_7	324925.Ppha_1377	7.686e-42	155.0	COG3093@1|root,COG3093@2|Bacteria	2|Bacteria	K	addiction module antidote protein HigA	higA	-	-	ko:K21498	-	-	-	-	ko00000,ko02048	-	-	-	HTH_3,HTH_31
BYD3_k127_5357574_0	1237149.C900_01529	2.422e-263	833.0	COG0577@1|root,COG0577@2|Bacteria,4NDUK@976|Bacteroidetes,47JJN@768503|Cytophagia	976|Bacteroidetes	V	FtsX-like permease family	-	-	-	-	-	-	-	-	-	-	-	-	FtsX,MacB_PCD
BYD3_k127_5357574_8	1123248.KB893328_gene931	9.194e-16	83.0	COG5485@1|root,COG5485@2|Bacteria,4PA5I@976|Bacteroidetes,1IZFN@117747|Sphingobacteriia	976|Bacteroidetes	S	SnoaL-like polyketide cyclase	-	-	-	-	-	-	-	-	-	-	-	-	SnoaL
BYD3_k127_5357574_6	755732.Fluta_3912	3.581e-46	171.0	COG4762@1|root,COG4762@2|Bacteria,4NPGF@976|Bacteroidetes	976|Bacteroidetes	S	Domain of unknown function (DUF1990)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1990
BYD3_k127_5357574_2	1123248.KB893370_gene4941	2.684e-87	292.0	COG0262@1|root,COG0262@2|Bacteria,4NHIH@976|Bacteroidetes,1J05Q@117747|Sphingobacteriia	976|Bacteroidetes	H	RibD C-terminal domain	-	-	-	-	-	-	-	-	-	-	-	-	RibD_C
BYD3_k127_5357574_3	1341181.FLJC2902T_22430	5.103e-82	276.0	COG0262@1|root,COG0262@2|Bacteria,4NMP3@976|Bacteroidetes,1I84M@117743|Flavobacteriia,2P0EY@237|Flavobacterium	976|Bacteroidetes	H	Dihydrofolate reductase	-	-	1.5.1.3	ko:K00287	ko00670,ko00790,ko01100,ko01523,map00670,map00790,map01100,map01523	M00126,M00840	R00936,R00937,R00939,R00940,R02235,R02236,R11765	RC00109,RC00110,RC00158	ko00000,ko00001,ko00002,ko01000	-	-	-	RibD_C
BYD3_k127_5357574_4	56110.Oscil6304_5587	1.437e-77	274.0	COG2848@1|root,COG2848@2|Bacteria,1G3IK@1117|Cyanobacteria	1117|Cyanobacteria	S	Uncharacterised ACR (DUF711)	-	-	-	ko:K09157	-	-	-	-	ko00000	-	-	-	DUF711
BYD3_k127_5357574_5	886377.Murru_2889	1.038e-58	205.0	COG4898@1|root,COG4898@2|Bacteria,4NQGY@976|Bacteroidetes,1I2X8@117743|Flavobacteriia	976|Bacteroidetes	S	Domain of unknown function (DU1801)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1801
BYD3_k127_5357574_11	1341155.FSS13T_18760	1.876e-12	67.0	COG4898@1|root,COG4898@2|Bacteria,4NQ4W@976|Bacteroidetes,1I2X2@117743|Flavobacteriia,2NWT5@237|Flavobacterium	976|Bacteroidetes	S	protein conserved in bacteria	-	-	-	-	-	-	-	-	-	-	-	-	DUF2200
BYD3_k127_5600101_4	1411685.U062_02144	3.931e-45	169.0	COG0657@1|root,COG0657@2|Bacteria,1NIHV@1224|Proteobacteria	1224|Proteobacteria	I	acetylesterase activity	-	-	-	-	-	-	-	-	-	-	-	-	Abhydrolase_3
BYD3_k127_5600101_3	1232437.KL661985_gene3563	7.104e-137	451.0	COG0154@1|root,COG0154@2|Bacteria,1MW3Z@1224|Proteobacteria,42RYP@68525|delta/epsilon subdivisions,2WNDE@28221|Deltaproteobacteria,2MK5X@213118|Desulfobacterales	28221|Deltaproteobacteria	J	Amidase	-	-	3.5.1.4,3.5.1.99	ko:K01426,ko:K19176	ko00330,ko00360,ko00380,ko00627,ko00643,ko01120,map00330,map00360,map00380,map00627,map00643,map01120	-	R02540,R03096,R03180,R03909,R05551,R05590	RC00010,RC00100,RC00950,RC01025	ko00000,ko00001,ko01000	-	-	-	Amidase
BYD3_k127_5600101_2	1366050.N234_09810	2.144e-144	476.0	28H5N@1|root,2Z7I8@2|Bacteria,1RC6E@1224|Proteobacteria,2W05M@28216|Betaproteobacteria,1KENA@119060|Burkholderiaceae	28216|Betaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_5600101_0	1366050.N234_09805	0.0	1185.0	COG1579@1|root,COG1579@2|Bacteria,1NR14@1224|Proteobacteria,2VZ72@28216|Betaproteobacteria,1KF11@119060|Burkholderiaceae	28216|Betaproteobacteria	S	Zn-ribbon protein possibly nucleic acid-binding	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_5600101_1	1366050.N234_09800	2.935e-281	898.0	COG0222@1|root,COG0222@2|Bacteria,1RAQC@1224|Proteobacteria,2VZH9@28216|Betaproteobacteria,1KE2Z@119060|Burkholderiaceae	28216|Betaproteobacteria	J	ribosome binding	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_5769087_7	247490.KSU1_C1153	2.265e-30	130.0	29WW7@1|root,30IHV@2|Bacteria,2J3QZ@203682|Planctomycetes	203682|Planctomycetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_5769087_6	1123248.KB893386_gene1935	8.747e-44	166.0	2C852@1|root,32YB2@2|Bacteria,4NM63@976|Bacteroidetes,1IX0W@117747|Sphingobacteriia	976|Bacteroidetes	S	Domain of unknown function (DUF4136)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4136
BYD3_k127_5769087_2	760192.Halhy_3735	6.985e-138	442.0	COG1082@1|root,COG1082@2|Bacteria,4NHJE@976|Bacteroidetes,1IWGQ@117747|Sphingobacteriia	976|Bacteroidetes	G	Xylose isomerase-like TIM barrel	-	-	-	-	-	-	-	-	-	-	-	-	AP_endonuc_2
BYD3_k127_5769087_0	1123248.KB893318_gene4120	3.377e-232	721.0	COG0673@1|root,COG0673@2|Bacteria,4NKJ1@976|Bacteroidetes,1IVPJ@117747|Sphingobacteriia	976|Bacteroidetes	S	Oxidoreductase family, C-terminal alpha/beta domain	-	-	-	-	-	-	-	-	-	-	-	-	GFO_IDH_MocA,GFO_IDH_MocA_C
BYD3_k127_5769087_4	1380384.JADN01000004_gene2134	1.643e-70	246.0	2DKFZ@1|root,309D6@2|Bacteria,4NEGR@976|Bacteroidetes,1HZN8@117743|Flavobacteriia	976|Bacteroidetes	S	Domain of unknown function (DUF4382)	-	-	-	-	-	-	-	-	-	-	-	-	CarboxypepD_reg,DUF4382
BYD3_k127_5769087_3	1121373.KB903666_gene1287	1.608e-104	347.0	COG1562@1|root,COG1562@2|Bacteria,4NEIK@976|Bacteroidetes,47J9F@768503|Cytophagia	976|Bacteroidetes	I	PFAM Squalene phytoene synthase	crtB	-	-	-	-	-	-	-	-	-	-	-	SQS_PSY
BYD3_k127_5769087_5	1237149.C900_04324	4.154e-63	223.0	COG2114@1|root,COG2114@2|Bacteria	2|Bacteria	T	Pfam Adenylate and Guanylate cyclase catalytic domain	-	-	4.6.1.1	ko:K01768	ko00230,ko02025,ko04113,ko04213,map00230,map02025,map04113,map04213	M00695	R00089,R00434	RC00295	ko00000,ko00001,ko00002,ko01000	-	-	-	CHASE2,Guanylate_cyc
BYD3_k127_5769087_1	1123248.KB893329_gene4456	1.372e-152	490.0	COG0500@1|root,COG0500@2|Bacteria,4PPPH@976|Bacteroidetes,1IW2X@117747|Sphingobacteriia	976|Bacteroidetes	Q	C-methyltransferase C-terminal domain	-	-	-	-	-	-	-	-	-	-	-	-	Methyltransf_13,Methyltransf_14,Methyltransf_23
BYD3_k127_5789601_29	1237149.C900_02751	6.725e-40	153.0	2ADSH@1|root,313I2@2|Bacteria,4NQMU@976|Bacteroidetes,47PP1@768503|Cytophagia	976|Bacteroidetes	S	TIGRFAM Gliding motility-associated lipoprotein, GldH	gldH	GO:0006022,GO:0006026,GO:0006030,GO:0006032,GO:0006040,GO:0006807,GO:0006928,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009987,GO:0017144,GO:0040011,GO:0042737,GO:0043170,GO:0044237,GO:0044248,GO:0046348,GO:0048870,GO:0051179,GO:0051674,GO:0071704,GO:0071976,GO:1901071,GO:1901072,GO:1901135,GO:1901136,GO:1901564,GO:1901565,GO:1901575	-	-	-	-	-	-	-	-	-	-	GldH_lipo
BYD3_k127_5789601_5	1237149.C900_02750	2.936e-184	582.0	COG1774@1|root,COG1774@2|Bacteria,4NENX@976|Bacteroidetes,47M8P@768503|Cytophagia	976|Bacteroidetes	S	PFAM PSP1 C-terminal conserved region	-	-	-	-	-	-	-	-	-	-	-	-	PSP1
BYD3_k127_5789601_6	1237149.C900_02749	7.02e-174	555.0	COG0151@1|root,COG0151@2|Bacteria,4NEUN@976|Bacteroidetes,47JIA@768503|Cytophagia	976|Bacteroidetes	F	Belongs to the GARS family	purD	-	6.3.4.13	ko:K01945	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	M00048	R04144	RC00090,RC00166	ko00000,ko00001,ko00002,ko01000	-	-	-	GARS_A,GARS_C,GARS_N
BYD3_k127_5789601_1	1237149.C900_02748	0.0	1122.0	COG0514@1|root,COG0514@2|Bacteria,4NEB4@976|Bacteroidetes,47JD8@768503|Cytophagia	976|Bacteroidetes	L	ATP-dependent DNA helicase RecQ	recQ	-	3.6.4.12	ko:K03654	ko03018,map03018	-	-	-	ko00000,ko00001,ko01000,ko03400	-	-	-	DEAD,HRDC,Helicase_C,RQC,RecQ_Zn_bind
BYD3_k127_5789601_13	1237149.C900_02747	1.775e-142	458.0	COG0517@1|root,COG0794@1|root,COG0517@2|Bacteria,COG0794@2|Bacteria,4NED8@976|Bacteroidetes,47KGF@768503|Cytophagia	976|Bacteroidetes	M	Belongs to the SIS family. GutQ KpsF subfamily	kdsD	-	5.3.1.13	ko:K06041	ko00540,ko01100,map00540,map01100	M00063	R01530	RC00541	ko00000,ko00001,ko00002,ko01000,ko01005	-	-	-	CBS,SIS
BYD3_k127_5789601_12	1237149.C900_02746	8.155e-150	482.0	COG0836@1|root,COG0836@2|Bacteria,4NE1Y@976|Bacteroidetes,47KJZ@768503|Cytophagia	976|Bacteroidetes	M	TIGRFAM mannose-1-phosphate guanylyltransferase mannose-6-phosphate isomerase	manC	-	2.7.7.13	ko:K00971	ko00051,ko00520,ko01100,ko01110,map00051,map00520,map01100,map01110	M00114,M00361,M00362	R00885	RC00002	ko00000,ko00001,ko00002,ko01000	-	-	-	NTP_transferase
BYD3_k127_5789601_8	1237149.C900_01775	1.062e-167	541.0	COG2234@1|root,COG2234@2|Bacteria,4NFDJ@976|Bacteroidetes,47M5P@768503|Cytophagia	976|Bacteroidetes	S	Peptidase family M28	-	-	-	-	-	-	-	-	-	-	-	-	PA,Peptidase_M28
BYD3_k127_5789601_0	1237149.C900_01776	0.0	1404.0	COG0403@1|root,COG1003@1|root,COG0403@2|Bacteria,COG1003@2|Bacteria,4NEDE@976|Bacteroidetes,47K29@768503|Cytophagia	976|Bacteroidetes	E	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor	gcvP	-	1.4.4.2	ko:K00281,ko:K00283	ko00260,ko00630,ko01100,ko01110,ko01130,ko01200,map00260,map00630,map01100,map01110,map01130,map01200	M00532	R01221,R03425	RC00022,RC00929,RC02834,RC02880	ko00000,ko00001,ko00002,ko01000	-	-	-	Aminotran_5,GDC-P
BYD3_k127_5789601_28	1237149.C900_03235	4.319e-40	153.0	2E5FG@1|root,33075@2|Bacteria,4NWB7@976|Bacteroidetes,47QE3@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_5789601_23	866536.Belba_0480	1.761e-72	250.0	COG0035@1|root,COG0035@2|Bacteria,4NFZM@976|Bacteroidetes,47P6X@768503|Cytophagia	976|Bacteroidetes	F	uracil phosphoribosyltransferase	upp	-	2.4.2.9	ko:K00761	ko00240,ko01100,map00240,map01100	-	R00966	RC00063	ko00000,ko00001,ko01000	-	-	-	UPRTase
BYD3_k127_5789601_14	1237149.C900_03238	7.27e-137	440.0	COG1363@1|root,COG1363@2|Bacteria,4NH34@976|Bacteroidetes,47MR1@768503|Cytophagia	976|Bacteroidetes	G	PFAM M42 glutamyl aminopeptidase	-	-	-	-	-	-	-	-	-	-	-	-	Peptidase_M42
BYD3_k127_5789601_22	742766.HMPREF9455_00891	1.805e-74	255.0	COG3738@1|root,COG3738@2|Bacteria,4NM46@976|Bacteroidetes,2FT3W@200643|Bacteroidia	976|Bacteroidetes	S	Domain of unknown function (DUF1287)	-	-	-	ko:K09974	-	-	-	-	ko00000	-	-	-	DUF1287
BYD3_k127_5789601_25	1237149.C900_03239	1.113e-60	214.0	COG0634@1|root,COG0634@2|Bacteria,4NNIB@976|Bacteroidetes,47PQ9@768503|Cytophagia	976|Bacteroidetes	F	Belongs to the purine pyrimidine phosphoribosyltransferase family	hpt	-	2.4.2.8	ko:K00760	ko00230,ko00983,ko01100,ko01110,map00230,map00983,map01100,map01110	-	R00190,R01132,R01229,R02142,R08237,R08238,R08245	RC00063,RC00122	ko00000,ko00001,ko01000	-	-	-	Pribosyltran
BYD3_k127_5789601_24	1313301.AUGC01000012_gene1376	1.242e-66	232.0	COG0563@1|root,COG0563@2|Bacteria,4NG7J@976|Bacteroidetes	976|Bacteroidetes	F	Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism	adk	-	2.7.4.3	ko:K00939	ko00230,ko00730,ko01100,ko01110,ko01130,map00230,map00730,map01100,map01110,map01130	M00049	R00127,R01547,R11319	RC00002	ko00000,ko00001,ko00002,ko01000,ko04147	-	-	-	ADK,Pribosyltran
BYD3_k127_5789601_9	1120965.AUBV01000008_gene1951	4.322e-162	517.0	COG0536@1|root,COG0536@2|Bacteria,4NEK4@976|Bacteroidetes,47JCS@768503|Cytophagia	976|Bacteroidetes	S	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control	obg	-	-	ko:K03979	-	-	-	-	ko00000,ko01000,ko03009	-	-	-	GTP1_OBG,MMR_HSR1
BYD3_k127_5789601_26	1237149.C900_03242	1.083e-54	196.0	COG0576@1|root,COG0576@2|Bacteria,4NQ6M@976|Bacteroidetes,47QCT@768503|Cytophagia	976|Bacteroidetes	O	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ	grpE	GO:0000166,GO:0000774,GO:0003674,GO:0005488,GO:0005515,GO:0008150,GO:0017076,GO:0030234,GO:0030554,GO:0036094,GO:0050790,GO:0051082,GO:0060589,GO:0060590,GO:0065007,GO:0065009,GO:0097159,GO:0098772,GO:1901265,GO:1901363	-	ko:K03687	-	-	-	-	ko00000,ko03029,ko03110	-	-	-	GrpE
BYD3_k127_5789601_7	1237149.C900_03243	1.775e-173	550.0	COG0484@1|root,COG0484@2|Bacteria,4NF41@976|Bacteroidetes,47MD9@768503|Cytophagia	976|Bacteroidetes	O	ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins	dnaJ	-	-	ko:K03686	-	-	-	-	ko00000,ko03029,ko03110	-	-	-	DnaJ,DnaJ_C,DnaJ_CXXCXGXG
BYD3_k127_5789601_18	1237149.C900_03244	1.312e-100	336.0	2BK1P@1|root,32EEX@2|Bacteria,4NRXN@976|Bacteroidetes,47QMH@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_5789601_15	1237149.C900_03245	2.936e-126	410.0	COG4152@1|root,COG4152@2|Bacteria,4NEJE@976|Bacteroidetes,47KYF@768503|Cytophagia	976|Bacteroidetes	S	PFAM ABC transporter	natA	-	-	ko:K01990	-	M00254	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	ABC_tran,DUF4162
BYD3_k127_5789601_11	1237149.C900_03246	2.897e-150	486.0	COG1668@1|root,COG1668@2|Bacteria,4NFSZ@976|Bacteroidetes,47JCK@768503|Cytophagia	976|Bacteroidetes	CP	COGs COG1668 ABC-type Na efflux pump permease component	natB	-	-	ko:K01992	-	M00254	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	ABC2_membrane_3
BYD3_k127_5789601_10	1237149.C900_03247	7.381e-159	510.0	COG4191@1|root,COG4191@2|Bacteria,4NEMP@976|Bacteroidetes,47Y3V@768503|Cytophagia	976|Bacteroidetes	T	PFAM Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase	vicK	-	-	-	-	-	-	-	-	-	-	-	HATPase_c
BYD3_k127_5789601_2	1237149.C900_03248	3.102e-286	884.0	COG0055@1|root,COG0055@2|Bacteria,4NF1Q@976|Bacteroidetes,47KRX@768503|Cytophagia	976|Bacteroidetes	C	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits	atpD	-	3.6.3.14	ko:K02112	ko00190,ko00195,ko01100,map00190,map00195,map01100	M00157	-	-	ko00000,ko00001,ko00002,ko00194,ko01000	3.A.2.1	-	-	ATP-synt_ab,ATP-synt_ab_N
BYD3_k127_5789601_32	1237149.C900_03249	1.039e-22	99.0	COG0355@1|root,COG0355@2|Bacteria	2|Bacteria	C	proton-transporting ATP synthase activity, rotational mechanism	atpC	GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0005886,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0008324,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015399,GO:0015405,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016462,GO:0016469,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0032991,GO:0033178,GO:0034220,GO:0034641,GO:0034654,GO:0042623,GO:0042625,GO:0042626,GO:0043492,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0044769,GO:0045259,GO:0045260,GO:0045261,GO:0045262,GO:0046034,GO:0046390,GO:0046483,GO:0046933,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0071944,GO:0072521,GO:0072522,GO:0090407,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0098797,GO:0099131,GO:0099132,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600	-	ko:K02114	ko00190,ko00195,ko01100,map00190,map00195,map01100	M00157	-	-	ko00000,ko00001,ko00002,ko00194	3.A.2.1	-	iHN637.CLJU_RS01195,iJN746.PP_5412,iSbBS512_1146.SbBS512_E4190	ATP-synt_DE,ATP-synt_DE_N
BYD3_k127_5789601_31	1120966.AUBU01000006_gene3102	4.475e-26	110.0	2CKAK@1|root,32SBZ@2|Bacteria,4NSJ2@976|Bacteroidetes,47R6B@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_5789601_20	1185876.BN8_05387	3.781e-92	308.0	COG0564@1|root,COG0564@2|Bacteria,4NFS8@976|Bacteroidetes,47KV5@768503|Cytophagia	976|Bacteroidetes	J	Pseudouridine synthase	rluC	-	5.4.99.23,5.4.99.28,5.4.99.29	ko:K06177,ko:K06180	-	-	-	-	ko00000,ko01000,ko03009,ko03016	-	-	-	PseudoU_synth_2
BYD3_k127_5789601_19	1123278.KB893400_gene4065	6.206e-100	335.0	COG1082@1|root,COG1082@2|Bacteria,4NKFY@976|Bacteroidetes,47N9K@768503|Cytophagia	976|Bacteroidetes	G	Xylose isomerase domain protein TIM barrel	-	-	-	-	-	-	-	-	-	-	-	-	AP_endonuc_2
BYD3_k127_5789601_30	761193.Runsl_0795	8.236e-40	154.0	2CDAN@1|root,309X8@2|Bacteria,4NRN2@976|Bacteroidetes,47QB3@768503|Cytophagia	976|Bacteroidetes	S	Gluconate 2-dehydrogenase subunit 3	-	-	-	-	-	-	-	-	-	-	-	-	Gluconate_2-dh3
BYD3_k127_5789601_3	388413.ALPR1_06265	1.36e-284	882.0	COG2303@1|root,COG2303@2|Bacteria,4NK1Z@976|Bacteroidetes,47NME@768503|Cytophagia	976|Bacteroidetes	E	GMC oxidoreductase	-	-	-	-	-	-	-	-	-	-	-	-	GMC_oxred_C,GMC_oxred_N
BYD3_k127_5789601_17	761193.Runsl_0797	6.245e-114	374.0	COG1082@1|root,COG1082@2|Bacteria,4NFMD@976|Bacteroidetes,47JA9@768503|Cytophagia	976|Bacteroidetes	G	Xylose isomerase domain protein TIM barrel	-	-	-	-	-	-	-	-	-	-	-	-	AP_endonuc_2
BYD3_k127_5789601_27	1122176.KB903561_gene3586	1.699e-45	170.0	COG2353@1|root,COG2353@2|Bacteria,4NI82@976|Bacteroidetes,1IXPV@117747|Sphingobacteriia	976|Bacteroidetes	S	YceI-like domain	-	-	-	-	-	-	-	-	-	-	-	-	YceI
BYD3_k127_5789601_16	1123248.KB893348_gene194	2.537e-121	422.0	COG2972@1|root,COG3292@1|root,COG2972@2|Bacteria,COG3292@2|Bacteria,4NJMF@976|Bacteroidetes,1IWR7@117747|Sphingobacteriia	976|Bacteroidetes	T	Y_Y_Y domain	-	-	-	-	-	-	-	-	-	-	-	-	His_kinase,Reg_prop,Y_Y_Y
BYD3_k127_5789601_33	1313301.AUGC01000021_gene1234	4.104e-10	74.0	COG2203@1|root,COG4372@1|root,COG2203@2|Bacteria,COG4372@2|Bacteria	2|Bacteria	Q	Transposase	-	-	2.1.1.80,3.1.1.61	ko:K03406,ko:K13924	ko02020,ko02030,map02020,map02030	M00506	-	-	ko00000,ko00001,ko00002,ko01000,ko02022,ko02035	-	-	-	CZB,CheB_methylest,CheR,CheR_N,GAF,Glycos_transf_2,HATPase_c,HisKA,MCPsignal,PAS_10,PAS_4,PAS_9,Response_reg
BYD3_k127_5789601_21	1205680.CAKO01000010_gene3904	4.205e-80	277.0	COG1878@1|root,COG1878@2|Bacteria,1MVWU@1224|Proteobacteria,2TUQ1@28211|Alphaproteobacteria,2JPSS@204441|Rhodospirillales	204441|Rhodospirillales	S	Putative cyclase	-	-	-	-	-	-	-	-	-	-	-	-	Cyclase
BYD3_k127_5789601_4	382464.ABSI01000005_gene1154	1.111e-225	709.0	COG0823@1|root,COG0823@2|Bacteria,46UYG@74201|Verrucomicrobia	74201|Verrucomicrobia	U	WD40-like Beta Propeller Repeat	-	-	-	-	-	-	-	-	-	-	-	-	PD40
BYD3_k127_5849080_1	1237149.C900_03200	0.0	1258.0	COG0341@1|root,COG0342@1|root,COG0341@2|Bacteria,COG0342@2|Bacteria,4NE1X@976|Bacteroidetes,47JV4@768503|Cytophagia	976|Bacteroidetes	U	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA	secD	-	-	ko:K03072,ko:K12257	ko02024,ko03060,ko03070,map02024,map03060,map03070	M00335	-	-	ko00000,ko00001,ko00002,ko02044	2.A.6.4,3.A.5.2,3.A.5.7	-	-	SecD_SecF,Sec_GG
BYD3_k127_5849080_59	1288963.ADIS_0767	2.185e-70	243.0	COG0572@1|root,COG0572@2|Bacteria,4NEEC@976|Bacteroidetes,47P8Z@768503|Cytophagia	976|Bacteroidetes	F	Belongs to the uridine kinase family	udk	-	2.7.1.48	ko:K00876	ko00240,ko00983,ko01100,map00240,map00983,map01100	-	R00513,R00516,R00517,R00962,R00964,R00967,R00968,R00970,R01548,R01549,R01880,R02091,R02096,R02097,R02327,R02332,R02371,R02372,R08232	RC00002,RC00017	ko00000,ko00001,ko01000	-	-	-	PRK
BYD3_k127_5849080_63	929703.KE386491_gene3454	3.484e-65	228.0	COG0127@1|root,COG0127@2|Bacteria,4NM42@976|Bacteroidetes,47PE9@768503|Cytophagia	976|Bacteroidetes	F	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions	rdgB	GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009141,GO:0009143,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046434,GO:0046483,GO:0046700,GO:0047429,GO:0055086,GO:0071704,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901575,GO:1901576	3.6.1.66	ko:K02428	ko00230,map00230	-	R00426,R00720,R01855,R02100,R02720,R03531	RC00002	ko00000,ko00001,ko01000	-	-	-	Ham1p_like
BYD3_k127_5849080_79	1237149.C900_03204	6.203e-26	118.0	COG0545@1|root,COG0545@2|Bacteria,4NTMN@976|Bacteroidetes	976|Bacteroidetes	M	Peptidyl-prolyl cis-trans isomerase	mip	-	5.2.1.8	ko:K03773	-	-	-	-	ko00000,ko01000,ko03110	-	-	-	FKBP_C
BYD3_k127_5849080_73	761193.Runsl_2379	3.382e-38	154.0	COG0545@1|root,COG0545@2|Bacteria,4NDW4@976|Bacteroidetes,47KIJ@768503|Cytophagia	976|Bacteroidetes	O	Peptidyl-prolyl cis-trans isomerase	ppiB	-	5.2.1.8	ko:K01802,ko:K03767	ko01503,ko04217,map01503,map04217	-	-	-	ko00000,ko00001,ko01000,ko03110,ko04147	-	-	-	FKBP_C,Pro_isomerase
BYD3_k127_5849080_33	1237149.C900_03206	5.102e-133	432.0	COG0618@1|root,COG0618@2|Bacteria,4NEXE@976|Bacteroidetes,47JVC@768503|Cytophagia	976|Bacteroidetes	S	phosphoesterase RecJ domain protein	nrnA	-	3.1.13.3,3.1.3.7	ko:K06881	ko00920,ko01100,ko01120,map00920,map01100,map01120	-	R00188,R00508	RC00078	ko00000,ko00001,ko01000,ko03400	-	-	-	DHH,DHHA1
BYD3_k127_5849080_62	153721.MYP_1758	2.097e-66	228.0	COG0105@1|root,COG0105@2|Bacteria,4NM5B@976|Bacteroidetes,47PQ3@768503|Cytophagia	976|Bacteroidetes	F	Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate	ndk	-	2.7.4.6	ko:K00940	ko00230,ko00240,ko00983,ko01100,ko01110,ko01130,ko04016,map00230,map00240,map00983,map01100,map01110,map01130,map04016	M00049,M00050,M00052,M00053	R00124,R00139,R00156,R00330,R00570,R00722,R01137,R01857,R02093,R02326,R02331,R03530,R11894,R11895	RC00002	ko00000,ko00001,ko00002,ko01000,ko04131	-	-	-	NDK
BYD3_k127_5849080_16	643867.Ftrac_0960	5.637e-180	576.0	COG0006@1|root,COG0006@2|Bacteria,4NI0S@976|Bacteroidetes,47MY8@768503|Cytophagia	976|Bacteroidetes	E	Belongs to the peptidase M24B family	-	-	3.4.11.9	ko:K01262	-	-	-	-	ko00000,ko01000,ko01002	-	-	-	AMP_N,Peptidase_M24
BYD3_k127_5849080_85	1121373.KB903665_gene3027	1.066e-15	78.0	2ECIG@1|root,33HGA@2|Bacteria,4NXUX@976|Bacteroidetes,47T4J@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_5849080_65	1237149.C900_01745	8.151e-61	211.0	COG0234@1|root,COG0234@2|Bacteria,4NRE1@976|Bacteroidetes,47Q9W@768503|Cytophagia	976|Bacteroidetes	O	Chaperonin 10 Kd subunit	-	-	-	-	-	-	-	-	-	-	-	-	Cpn10
BYD3_k127_5849080_31	1237149.C900_01743	1.102e-141	462.0	COG1322@1|root,COG1322@2|Bacteria,4NE04@976|Bacteroidetes,47MZE@768503|Cytophagia	976|Bacteroidetes	S	RmuC family	rmuC	-	-	ko:K09760	-	-	-	-	ko00000	-	-	-	RmuC
BYD3_k127_5849080_11	1121373.KB903662_gene75	3.256e-191	604.0	COG4992@1|root,COG4992@2|Bacteria,4NE93@976|Bacteroidetes,47K80@768503|Cytophagia	976|Bacteroidetes	E	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family	rocD	-	2.6.1.13	ko:K00819	ko00330,ko01100,ko01110,ko01130,map00330,map01100,map01110,map01130	-	R00667	RC00006,RC00062	ko00000,ko00001,ko01000,ko01007	-	-	-	Aminotran_3
BYD3_k127_5849080_57	468059.AUHA01000002_gene316	2.054e-75	258.0	COG1011@1|root,COG1011@2|Bacteria,4NIMR@976|Bacteroidetes,1IPZN@117747|Sphingobacteriia	976|Bacteroidetes	S	TIGRFAM HAD-superfamily hydrolase, subfamily IA, variant 3	-	-	3.8.1.2	ko:K01560,ko:K07025	ko00361,ko00625,ko01100,ko01120,map00361,map00625,map01100,map01120	-	R05287	RC00697	ko00000,ko00001,ko01000	-	-	-	HAD_2
BYD3_k127_5849080_46	1123276.KB893281_gene4336	3.396e-97	330.0	COG0859@1|root,COG0859@2|Bacteria,4NEPH@976|Bacteroidetes,47MA4@768503|Cytophagia	976|Bacteroidetes	M	PFAM glycosyl transferase family 9	-	-	-	-	-	-	-	-	-	-	-	-	Glyco_transf_9
BYD3_k127_5849080_53	203275.BFO_0899	4.161e-78	265.0	COG0463@1|root,COG0463@2|Bacteria,4NGJK@976|Bacteroidetes,2FM49@200643|Bacteroidia,22X83@171551|Porphyromonadaceae	976|Bacteroidetes	M	Protein of unknown function (DUF4254)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4254
BYD3_k127_5849080_78	926556.Echvi_1447	1.866e-28	122.0	COG1564@1|root,COG1564@2|Bacteria,4NGJH@976|Bacteroidetes,47MV1@768503|Cytophagia	976|Bacteroidetes	H	thiamine pyrophosphokinase	-	-	2.7.6.2	ko:K00949	ko00730,ko01100,map00730,map01100	-	R00619	RC00002,RC00017	ko00000,ko00001,ko01000	-	-	-	TPK_B1_binding,TPK_catalytic
BYD3_k127_5849080_66	1239962.C943_01461	1.226e-58	209.0	COG1595@1|root,COG1595@2|Bacteria,4NNBY@976|Bacteroidetes,47PH5@768503|Cytophagia	976|Bacteroidetes	K	RNA polymerase sigma factor, sigma-70 family	-	-	-	ko:K03088	-	-	-	-	ko00000,ko03021	-	-	-	Sigma70_r2,Sigma70_r4_2
BYD3_k127_5849080_64	1189612.A33Q_1645	4.837e-63	229.0	COG3712@1|root,COG3712@2|Bacteria,4NMA2@976|Bacteroidetes,47PEK@768503|Cytophagia	976|Bacteroidetes	PT	Domain of unknown function (DUF4974)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4974,FecR
BYD3_k127_5849080_35	388413.ALPR1_20173	2.045e-130	439.0	COG4796@1|root,COG4796@2|Bacteria,4PM2P@976|Bacteroidetes,47Y0K@768503|Cytophagia	976|Bacteroidetes	U	Type ii and iii secretion system protein	-	-	-	-	-	-	-	-	-	-	-	-	CarbopepD_reg_2,DUF4974,STN
BYD3_k127_5849080_23	1239962.C943_04256	5.04e-160	511.0	COG3239@1|root,COG3239@2|Bacteria,4NERD@976|Bacteroidetes,47JP1@768503|Cytophagia	976|Bacteroidetes	I	fatty acid desaturase	-	-	1.14.19.3	ko:K00508	ko00591,ko01100,map00591,map01100	-	R07063	RC00917	ko00000,ko00001,ko01000,ko01004	-	-	-	FA_desaturase
BYD3_k127_5849080_50	1279009.ADICEAN_00698	4.336e-92	307.0	COG0688@1|root,COG0688@2|Bacteria,4NFU1@976|Bacteroidetes,47MWN@768503|Cytophagia	976|Bacteroidetes	I	Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer)	psd	-	4.1.1.65	ko:K01613	ko00564,ko01100,ko01110,map00564,map01100,map01110	M00093	R02055	RC00299	ko00000,ko00001,ko00002,ko01000	-	-	-	PS_Dcarbxylase
BYD3_k127_5849080_8	1237149.C900_02782	2.762e-231	722.0	COG0334@1|root,COG0334@2|Bacteria,4NEBH@976|Bacteroidetes,47K4Z@768503|Cytophagia	976|Bacteroidetes	E	Belongs to the Glu Leu Phe Val dehydrogenases family	gdhA	-	1.4.1.3	ko:K00261	ko00220,ko00250,ko00471,ko00910,ko01100,ko01200,ko04217,ko04964,map00220,map00250,map00471,map00910,map01100,map01200,map04217,map04964	M00740	R00243,R00248	RC00006,RC02799	ko00000,ko00001,ko00002,ko01000,ko04147	-	-	-	ELFV_dehydrog,ELFV_dehydrog_N
BYD3_k127_5849080_41	1237149.C900_02781	1.029e-108	358.0	COG4589@1|root,COG4589@2|Bacteria,4NIPM@976|Bacteroidetes,47KPM@768503|Cytophagia	976|Bacteroidetes	S	Belongs to the CDS family	cdsA	-	2.7.7.41	ko:K00981	ko00564,ko01100,ko01110,ko04070,map00564,map01100,map01110,map04070	M00093	R01799	RC00002	ko00000,ko00001,ko00002,ko01000	-	-	-	CTP_transf_1
BYD3_k127_5849080_52	1237149.C900_02779	1.259e-82	289.0	COG1266@1|root,COG1266@2|Bacteria,4NHE1@976|Bacteroidetes,47JZ8@768503|Cytophagia	976|Bacteroidetes	S	PFAM CAAX amino terminal protease family	-	-	-	ko:K07052	-	-	-	-	ko00000	-	-	-	Abi
BYD3_k127_5849080_19	761193.Runsl_0390	4.135e-172	544.0	COG0042@1|root,COG0042@2|Bacteria,4NEN4@976|Bacteroidetes,47JGV@768503|Cytophagia	976|Bacteroidetes	J	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines	dus	-	-	-	-	-	-	-	-	-	-	-	Dus
BYD3_k127_5849080_60	457424.BFAG_00598	1.635e-67	239.0	COG3568@1|root,COG3568@2|Bacteria,4NHXV@976|Bacteroidetes,2FNR3@200643|Bacteroidia,4AN9X@815|Bacteroidaceae	976|Bacteroidetes	S	Endonuclease Exonuclease phosphatase family	-	-	-	-	-	-	-	-	-	-	-	-	Exo_endo_phos
BYD3_k127_5849080_4	1237149.C900_04491	5e-324	1012.0	COG2866@1|root,COG2866@2|Bacteria,4NEJA@976|Bacteroidetes,47KZ0@768503|Cytophagia	976|Bacteroidetes	E	PFAM Zinc carboxypeptidase	-	-	-	-	-	-	-	-	-	-	-	-	Peptidase_M14
BYD3_k127_5849080_2	880071.Fleli_2004	0.0	1207.0	COG1629@1|root,COG4771@2|Bacteria,4NF66@976|Bacteroidetes,47JMC@768503|Cytophagia	976|Bacteroidetes	P	Carboxypeptidase regulatory-like domain	-	-	-	-	-	-	-	-	-	-	-	-	CarboxypepD_reg,Plug,TonB_dep_Rec
BYD3_k127_5849080_20	1237149.C900_03224	5.051e-169	544.0	COG4623@1|root,COG4623@2|Bacteria,4NHFW@976|Bacteroidetes,47NX6@768503|Cytophagia	976|Bacteroidetes	M	soluble lytic transglycosylase fused to an ABC-type amino acid-binding protein	mltF	-	-	ko:K18691	-	-	-	-	ko00000,ko01000,ko01011	-	-	-	SBP_bac_3,SLT
BYD3_k127_5849080_15	1237149.C900_03222	3.335e-180	574.0	COG0654@1|root,COG0654@2|Bacteria,4NGIU@976|Bacteroidetes,47KM9@768503|Cytophagia	976|Bacteroidetes	H	Catalyzes the hydroxylation of L-kynurenine (L-Kyn) to form 3-hydroxy-L-kynurenine (L-3OHKyn). Required for synthesis of quinolinic acid	kmo	-	1.14.13.9	ko:K00486	ko00380,ko01100,map00380,map01100	M00038	R01960	RC00046	ko00000,ko00001,ko00002,ko01000	-	-	-	FAD_binding_3
BYD3_k127_5849080_21	643867.Ftrac_2835	3.734e-167	536.0	COG3844@1|root,COG3844@2|Bacteria,4NECS@976|Bacteroidetes,47KPP@768503|Cytophagia	976|Bacteroidetes	E	Catalyzes the cleavage of L-kynurenine (L-Kyn) and L-3- hydroxykynurenine (L-3OHKyn) into anthranilic acid (AA) and 3- hydroxyanthranilic acid (3-OHAA), respectively	kynU	-	3.7.1.3	ko:K01556	ko00380,ko01100,map00380,map01100	M00038	R00987,R02668,R03936	RC00284,RC00415	ko00000,ko00001,ko00002,ko01000	-	-	-	Aminotran_5
BYD3_k127_5849080_69	198094.BA_2039	9.131e-46	170.0	COG0350@1|root,COG0350@2|Bacteria,1VA03@1239|Firmicutes,4HKC0@91061|Bacilli,1ZGW4@1386|Bacillus	91061|Bacilli	L	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated	ogt	GO:0003674,GO:0003824,GO:0003908,GO:0006139,GO:0006259,GO:0006281,GO:0006304,GO:0006307,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008168,GO:0008172,GO:0009987,GO:0016740,GO:0016741,GO:0032259,GO:0033554,GO:0034641,GO:0035510,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:1901360	2.1.1.63	ko:K00567	-	-	-	-	ko00000,ko01000,ko03400	-	-	-	DNA_binding_1,Methyltransf_1N
BYD3_k127_5849080_51	1408433.JHXV01000014_gene3679	1.806e-83	280.0	COG0662@1|root,COG0662@2|Bacteria,4NFU2@976|Bacteroidetes,1HX5C@117743|Flavobacteriia	976|Bacteroidetes	G	Catalyzes the oxidative ring opening of 3- hydroxyanthranilate to 2-amino-3-carboxymuconate semialdehyde, which spontaneously cyclizes to quinolinate	nbaC	-	1.13.11.6	ko:K00452	ko00380,ko01100,map00380,map01100	M00038	R02665	RC00387	ko00000,ko00001,ko00002,ko01000	-	-	-	3-HAO
BYD3_k127_5849080_43	468059.AUHA01000002_gene602	5.484e-104	344.0	COG1028@1|root,COG1028@2|Bacteria,4NICN@976|Bacteroidetes,1IRUS@117747|Sphingobacteriia	976|Bacteroidetes	IQ	PFAM Short-chain dehydrogenase reductase SDR	-	-	1.1.1.100	ko:K00059	ko00061,ko00333,ko00780,ko01040,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01040,map01100,map01130,map01212	M00083,M00572	R04533,R04534,R04536,R04543,R04566,R04953,R04964,R07759,R07763,R10116,R10120,R11671	RC00029,RC00117	ko00000,ko00001,ko00002,ko01000,ko01004	-	-	-	adh_short_C2
BYD3_k127_5849080_7	1237149.C900_03217	8.275e-238	742.0	COG1012@1|root,COG1012@2|Bacteria,4NEB7@976|Bacteroidetes,47JKD@768503|Cytophagia	976|Bacteroidetes	C	Belongs to the aldehyde dehydrogenase family	-	-	1.2.1.3,1.2.1.32,1.2.1.85	ko:K00128,ko:K10217	ko00010,ko00053,ko00071,ko00280,ko00310,ko00330,ko00340,ko00362,ko00380,ko00410,ko00561,ko00620,ko00622,ko00625,ko00903,ko00981,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00053,map00071,map00280,map00310,map00330,map00340,map00362,map00380,map00410,map00561,map00620,map00622,map00625,map00903,map00981,map01100,map01110,map01120,map01130,map01220	M00038,M00135,M00569	R00264,R00631,R00710,R00904,R01752,R01986,R02549,R02678,R02762,R02940,R02957,R03283,R03869,R03889,R04065,R04506,R04903,R05050,R05237,R05238,R05286,R05353,R06366,R08146	RC00047,RC00071,RC00080,RC00186,RC00218,RC00242,RC00254,RC00816,RC01500	ko00000,ko00001,ko00002,ko01000	-	-	-	Aldedh
BYD3_k127_5849080_84	929713.NIASO_13715	2.497e-17	86.0	COG5652@1|root,COG5652@2|Bacteria,4NXUQ@976|Bacteroidetes	976|Bacteroidetes	S	Psort location CytoplasmicMembrane, score	fjo27	-	-	-	-	-	-	-	-	-	-	-	VanZ
BYD3_k127_5849080_32	1185876.BN8_01016	2.312e-134	439.0	COG4941@1|root,COG4941@2|Bacteria,4NGCS@976|Bacteroidetes,47M8X@768503|Cytophagia	976|Bacteroidetes	K	TIGRFAM RNA polymerase sigma factor, sigma-70 family	-	-	-	ko:K03088	-	-	-	-	ko00000,ko03021	-	-	-	Sigma70_r2,Sigma70_r4_2
BYD3_k127_5849080_76	700598.Niako_0302	3.39e-31	125.0	COG3795@1|root,COG3795@2|Bacteria,4NUTR@976|Bacteroidetes	976|Bacteroidetes	S	YCII-related domain	-	-	-	-	-	-	-	-	-	-	-	-	YCII
BYD3_k127_5849080_27	1211813.CAPH01000017_gene897	4.042e-148	479.0	COG0738@1|root,COG0738@2|Bacteria,4NEYR@976|Bacteroidetes,2FMPP@200643|Bacteroidia	976|Bacteroidetes	G	transporter	-	-	-	-	-	-	-	-	-	-	-	-	MFS_1
BYD3_k127_5849080_42	926556.Echvi_1452	8.994e-108	357.0	COG1208@1|root,COG1208@2|Bacteria,4PKJR@976|Bacteroidetes,47Y1U@768503|Cytophagia	976|Bacteroidetes	JM	Nucleotidyl transferase	-	-	-	-	-	-	-	-	-	-	-	-	NTP_transferase
BYD3_k127_5849080_45	1237149.C900_01163	1.239e-103	351.0	COG1506@1|root,COG1506@2|Bacteria,4NGW1@976|Bacteroidetes,47MCA@768503|Cytophagia	976|Bacteroidetes	E	Secretory lipase	-	-	-	-	-	-	-	-	-	-	-	-	LIP,Peptidase_S9
BYD3_k127_5849080_30	1237149.C900_02767	1.438e-143	461.0	COG1600@1|root,COG1600@2|Bacteria,4NFCJ@976|Bacteroidetes,47JAQ@768503|Cytophagia	976|Bacteroidetes	C	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)	queG	-	1.17.99.6	ko:K18979	-	-	-	-	ko00000,ko01000,ko03016	-	-	-	DUF1730,Fer4_16
BYD3_k127_5849080_83	1185876.BN8_06325	6.742e-18	84.0	2A7GX@1|root,30WEH@2|Bacteria,4P9UT@976|Bacteroidetes,47S3Y@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_5849080_10	1237149.C900_02768	6.139e-194	615.0	COG0457@1|root,COG0457@2|Bacteria,4NERG@976|Bacteroidetes,47JE1@768503|Cytophagia	976|Bacteroidetes	S	Oxygen tolerance	-	-	-	-	-	-	-	-	-	-	-	-	BatD
BYD3_k127_5849080_17	1237149.C900_02769	1.549e-176	561.0	COG0082@1|root,COG0082@2|Bacteria,4NDXJ@976|Bacteroidetes,47KB2@768503|Cytophagia	976|Bacteroidetes	E	Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system	aroC	GO:0000166,GO:0003674,GO:0003824,GO:0004107,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009423,GO:0009987,GO:0010181,GO:0016053,GO:0016829,GO:0016835,GO:0016838,GO:0019438,GO:0019752,GO:0032553,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046417,GO:0048037,GO:0050662,GO:0071704,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576	4.2.3.5	ko:K01736	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	M00022	R01714	RC00586	ko00000,ko00001,ko00002,ko01000	-	-	-	Chorismate_synt
BYD3_k127_5849080_12	468059.AUHA01000003_gene1460	7.687e-188	597.0	COG1301@1|root,COG1301@2|Bacteria,4NDUU@976|Bacteroidetes,1INWV@117747|Sphingobacteriia	976|Bacteroidetes	C	Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family	gltP	-	-	ko:K11102	-	-	-	-	ko00000,ko02000	2.A.23.1.1,2.A.23.1.2	-	-	SDF
BYD3_k127_5849080_54	1189612.A33Q_2234	3.024e-77	262.0	COG0694@1|root,COG0694@2|Bacteria,4NG0Q@976|Bacteroidetes,47PV2@768503|Cytophagia	976|Bacteroidetes	O	PFAM Scaffold protein Nfu NifU N terminal	-	-	-	-	-	-	-	-	-	-	-	-	Nfu_N,NifU
BYD3_k127_5849080_34	700598.Niako_1179	1.017e-132	445.0	COG4775@1|root,COG4775@2|Bacteria,4NF38@976|Bacteroidetes,1IV5H@117747|Sphingobacteriia	976|Bacteroidetes	M	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_5849080_6	925409.KI911562_gene307	3.829e-242	758.0	COG0069@1|root,COG0069@2|Bacteria,4NFKH@976|Bacteroidetes,1IREF@117747|Sphingobacteriia	976|Bacteroidetes	E	Belongs to the glutamate synthase family	glt	-	-	-	-	-	-	-	-	-	-	-	Glu_synthase
BYD3_k127_5849080_48	1237149.C900_02856	3.209e-95	317.0	COG0566@1|root,COG0566@2|Bacteria,4NF6H@976|Bacteroidetes,47JZC@768503|Cytophagia	976|Bacteroidetes	J	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family	trmH	-	2.1.1.185	ko:K03218,ko:K03437	-	-	-	-	ko00000,ko01000,ko03009,ko03016	-	-	-	SpoU_methylase,SpoU_sub_bind
BYD3_k127_5849080_77	1237149.C900_01730	3.79e-31	123.0	COG2154@1|root,COG2154@2|Bacteria,4NS9U@976|Bacteroidetes,47RW0@768503|Cytophagia	976|Bacteroidetes	H	PFAM Pterin 4 alpha carbinolamine dehydratase	phhB	-	4.2.1.96	ko:K01724	ko00790,map00790	-	R04734	RC01208	ko00000,ko00001,ko01000,ko04147	-	-	-	Pterin_4a
BYD3_k127_5849080_81	1237149.C900_01728	8.672e-25	105.0	COG2921@1|root,COG2921@2|Bacteria,4P9XR@976|Bacteroidetes,47S9P@768503|Cytophagia	976|Bacteroidetes	S	Protein of unknown function (DUF493)	-	-	-	-	-	-	-	-	-	-	-	-	DUF493
BYD3_k127_5849080_9	1237149.C900_01727	1.294e-226	721.0	COG0760@1|root,COG0760@2|Bacteria,4NDZZ@976|Bacteroidetes,47KBN@768503|Cytophagia	976|Bacteroidetes	O	peptidylprolyl isomerase	ppiD	-	5.2.1.8	ko:K01802,ko:K03770	-	-	-	-	ko00000,ko01000,ko03110	-	-	-	Rotamase_2,Rotamase_3,SurA_N_2
BYD3_k127_5849080_36	1237149.C900_01726	1.369e-127	421.0	COG1253@1|root,COG1253@2|Bacteria,4NG0I@976|Bacteroidetes,47KQX@768503|Cytophagia	976|Bacteroidetes	S	CBS domain	tlyC	-	-	ko:K03699	-	-	-	-	ko00000,ko02042	-	-	-	CBS,CorC_HlyC,DUF21
BYD3_k127_5849080_72	1237149.C900_01725	1.98e-39	153.0	COG3117@1|root,COG3117@2|Bacteria,4NRIN@976|Bacteroidetes,47R6J@768503|Cytophagia	976|Bacteroidetes	S	Lipopolysaccharide-assembly, LptC-related	-	-	-	-	-	-	-	-	-	-	-	-	LptC
BYD3_k127_5849080_39	1237149.C900_01724	7.48e-111	373.0	COG0457@1|root,COG0457@2|Bacteria,4NF7U@976|Bacteroidetes,47MJ6@768503|Cytophagia	976|Bacteroidetes	S	Tetratricopeptide repeat protein	-	-	-	-	-	-	-	-	-	-	-	-	TPR_8
BYD3_k127_5849080_44	1237149.C900_01723	7.554e-104	351.0	COG2067@1|root,COG2067@2|Bacteria,4NEP1@976|Bacteroidetes,47N37@768503|Cytophagia	976|Bacteroidetes	I	membrane	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_5849080_61	1237149.C900_01722	1.773e-66	235.0	COG1521@1|root,COG1521@2|Bacteria,4NE9E@976|Bacteroidetes,47K36@768503|Cytophagia	976|Bacteroidetes	H	Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis	coaX	-	2.7.1.33	ko:K03525	ko00770,ko01100,map00770,map01100	M00120	R02971,R03018,R04391	RC00002,RC00017	ko00000,ko00001,ko00002,ko01000	-	-	-	Pan_kinase
BYD3_k127_5849080_18	1048983.EL17_12445	7.378e-175	562.0	COG0334@1|root,COG0334@2|Bacteria,4NG6Y@976|Bacteroidetes,47KWD@768503|Cytophagia	976|Bacteroidetes	E	Glu Leu Phe Val dehydrogenase	-	-	1.4.1.3	ko:K00261	ko00220,ko00250,ko00471,ko00910,ko01100,ko01200,ko04217,ko04964,map00220,map00250,map00471,map00910,map01100,map01200,map04217,map04964	M00740	R00243,R00248	RC00006,RC02799	ko00000,ko00001,ko00002,ko01000,ko04147	-	-	-	ELFV_dehydrog,ELFV_dehydrog_N
BYD3_k127_5849080_25	929562.Emtol_3103	5.77e-155	501.0	COG1055@1|root,COG1055@2|Bacteria,4NGP4@976|Bacteroidetes,47JIU@768503|Cytophagia	976|Bacteroidetes	P	Na H antiporter NhaD and related arsenite	nhaD	-	-	-	-	-	-	-	-	-	-	-	CitMHS
BYD3_k127_5849080_24	929562.Emtol_3103	1.924e-159	513.0	COG1055@1|root,COG1055@2|Bacteria,4NGP4@976|Bacteroidetes,47JIU@768503|Cytophagia	976|Bacteroidetes	P	Na H antiporter NhaD and related arsenite	nhaD	-	-	-	-	-	-	-	-	-	-	-	CitMHS
BYD3_k127_5849080_22	1288963.ADIS_3959	1.215e-165	532.0	COG0527@1|root,COG0527@2|Bacteria,4NFWR@976|Bacteroidetes,47KM0@768503|Cytophagia	976|Bacteroidetes	E	Belongs to the aspartokinase family	lysC	-	2.7.2.4	ko:K00928	ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01210,map01230	M00016,M00017,M00018,M00033,M00525,M00526,M00527	R00480	RC00002,RC00043	ko00000,ko00001,ko00002,ko01000	-	-	-	AA_kinase
BYD3_k127_5849080_75	37919.EP51_05135	7.236e-34	132.0	2ED24@1|root,336Z2@2|Bacteria,2HJJJ@201174|Actinobacteria,4G6XU@85025|Nocardiaceae	201174|Actinobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_5849080_56	616991.JPOO01000001_gene4572	1.82e-76	282.0	COG2202@1|root,COG3829@1|root,COG4251@1|root,COG2202@2|Bacteria,COG3829@2|Bacteria,COG4251@2|Bacteria,4NE3J@976|Bacteroidetes,1HXNX@117743|Flavobacteriia,23G9Z@178469|Arenibacter	976|Bacteroidetes	T	PAS domain	-	-	-	-	-	-	-	-	-	-	-	-	HATPase_c,HisKA,PAS_3,PAS_4,PAS_9
BYD3_k127_5849080_47	1121904.ARBP01000038_gene2564	5.052e-97	323.0	COG1349@1|root,COG1349@2|Bacteria,4NE7U@976|Bacteroidetes,47PK3@768503|Cytophagia	976|Bacteroidetes	K	DeoR C terminal sensor domain	-	-	-	-	-	-	-	-	-	-	-	-	DeoRC,HTH_DeoR
BYD3_k127_5849080_5	1150600.ADIARSV_0073	1.904e-288	895.0	COG0726@1|root,COG0726@2|Bacteria,4NFJP@976|Bacteroidetes,1IQSF@117747|Sphingobacteriia	976|Bacteroidetes	G	polysaccharide deacetylase	-	-	3.2.1.4	ko:K01179	ko00500,ko01100,map00500,map01100	-	R06200,R11307,R11308	-	ko00000,ko00001,ko01000	-	GH5,GH9	-	CelD_N,Glyco_hydro_9,Polysacc_deac_1
BYD3_k127_5849080_49	485917.Phep_0675	5.79e-95	316.0	COG0726@1|root,COG0726@2|Bacteria,4NFJP@976|Bacteroidetes,1IQSF@117747|Sphingobacteriia	976|Bacteroidetes	G	polysaccharide deacetylase	-	-	3.2.1.4	ko:K01179	ko00500,ko01100,map00500,map01100	-	R06200,R11307,R11308	-	ko00000,ko00001,ko01000	-	GH5,GH9	-	CelD_N,Glyco_hydro_9,Polysacc_deac_1
BYD3_k127_5849080_38	1121904.ARBP01000038_gene2567	1.476e-117	385.0	COG1940@1|root,COG1940@2|Bacteria,4NHNJ@976|Bacteroidetes	976|Bacteroidetes	GK	rok family	-	-	2.7.1.2	ko:K00845	ko00010,ko00052,ko00500,ko00520,ko00521,ko00524,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00052,map00500,map00520,map00521,map00524,map01100,map01110,map01120,map01130,map01200	M00001,M00549	R00299,R01600,R01786	RC00002,RC00017	ko00000,ko00001,ko00002,ko01000	-	-	-	ROK
BYD3_k127_5849080_37	1121904.ARBP01000038_gene2568	2.024e-120	397.0	COG0738@1|root,COG0738@2|Bacteria,4NHZ7@976|Bacteroidetes	976|Bacteroidetes	G	Transporter, major facilitator family protein	-	-	-	-	-	-	-	-	-	-	-	-	MFS_1,Sugar_tr
BYD3_k127_5849080_29	485917.Phep_0681	1.954e-146	466.0	COG4821@1|root,COG4821@2|Bacteria,4NHQW@976|Bacteroidetes,1ITT0@117747|Sphingobacteriia	976|Bacteroidetes	S	SIS domain	-	-	-	-	-	-	-	-	-	-	-	-	SIS_2
BYD3_k127_5849080_70	269798.CHU_2876	1.226e-45	171.0	COG0664@1|root,COG0664@2|Bacteria,4NMI9@976|Bacteroidetes,47XMJ@768503|Cytophagia	976|Bacteroidetes	T	Cyclic nucleotide-binding domain	-	-	-	-	-	-	-	-	-	-	-	-	cNMP_binding
BYD3_k127_5849080_82	269798.CHU_2875	7.552e-20	95.0	28SWV@1|root,2ZF6C@2|Bacteria,4P7RD@976|Bacteroidetes,47WF4@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_5849080_67	700598.Niako_5920	1.995e-57	203.0	29AZZ@1|root,3196E@2|Bacteria,4NPUW@976|Bacteroidetes,1IXZZ@117747|Sphingobacteriia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_5849080_58	1123234.AUKI01000011_gene1303	3.794e-71	248.0	2AC9X@1|root,311UN@2|Bacteria,4NT5W@976|Bacteroidetes,1IAHP@117743|Flavobacteriia	976|Bacteroidetes	S	Protein of unknown function (DUF2927)	-	-	-	-	-	-	-	-	-	-	-	-	DUF2927
BYD3_k127_5849080_3	1123248.KB893326_gene1394	0.0	1144.0	COG1629@1|root,COG4771@2|Bacteria,4NEIG@976|Bacteroidetes,1IPTQ@117747|Sphingobacteriia	976|Bacteroidetes	P	Outer membrane protein beta-barrel family	-	-	-	-	-	-	-	-	-	-	-	-	CarbopepD_reg_2,CarboxypepD_reg,OMP_b-brl_3,Plug
BYD3_k127_5849080_55	382464.ABSI01000010_gene3680	8.068e-77	274.0	COG4124@1|root,COG4124@2|Bacteria	2|Bacteria	G	Belongs to the glycosyl hydrolase 26 family	-	-	-	-	-	-	-	-	-	-	-	-	Cu_amine_oxidN1,Glyco_hydro_26
BYD3_k127_5849080_0	1237149.C900_02809	0.0	1372.0	COG0209@1|root,COG0209@2|Bacteria,4NEHQ@976|Bacteroidetes,47JEH@768503|Cytophagia	976|Bacteroidetes	F	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides	nrdA	-	1.17.4.1	ko:K00525	ko00230,ko00240,ko01100,map00230,map00240,map01100	M00053	R02017,R02018,R02019,R02024	RC00613	ko00000,ko00001,ko00002,ko01000,ko03400	-	-	-	ATP-cone,Ribonuc_red_lgC,Ribonuc_red_lgN
BYD3_k127_5849080_14	1237149.C900_02810	3.155e-184	579.0	COG0208@1|root,COG0208@2|Bacteria,4NG18@976|Bacteroidetes,47MSG@768503|Cytophagia	976|Bacteroidetes	F	reductase, small chain	nrdB	-	1.17.4.1	ko:K00526	ko00230,ko00240,ko01100,map00230,map00240,map01100	M00053	R02017,R02018,R02019,R02024	RC00613	ko00000,ko00001,ko00002,ko01000,ko03400	-	-	-	Ribonuc_red_sm
BYD3_k127_5849080_71	1121859.KB890756_gene1341	2.284e-44	164.0	COG0261@1|root,COG0261@2|Bacteria,4NSHE@976|Bacteroidetes,47R7R@768503|Cytophagia	976|Bacteroidetes	J	This protein binds to 23S rRNA in the presence of protein L20	rplU	GO:0003674,GO:0003735,GO:0005198	-	ko:K02888	ko03010,map03010	M00178	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	HHH_5,Rho_N,Ribosomal_L21p
BYD3_k127_5849080_74	867902.Ornrh_1935	4.583e-38	143.0	COG0211@1|root,COG0211@2|Bacteria,4NS7T@976|Bacteroidetes,1I2S0@117743|Flavobacteriia	976|Bacteroidetes	J	Belongs to the bacterial ribosomal protein bL27 family	rpmA	GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904	-	ko:K02899	ko03010,map03010	M00178	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_L27
BYD3_k127_5849080_28	1120968.AUBX01000017_gene1883	2.421e-147	473.0	COG0407@1|root,COG0407@2|Bacteria,4NEQ7@976|Bacteroidetes,47K90@768503|Cytophagia	976|Bacteroidetes	H	Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III	hemE	-	4.1.1.37	ko:K01599	ko00860,ko01100,ko01110,map00860,map01100,map01110	M00121	R03197,R04972	RC00872	ko00000,ko00001,ko00002,ko01000	-	-	-	URO-D
BYD3_k127_5849080_26	1237149.C900_00475	8.196e-152	484.0	COG0777@1|root,COG0777@2|Bacteria,4NFMH@976|Bacteroidetes,47JX2@768503|Cytophagia	976|Bacteroidetes	I	Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA	accD	-	2.1.3.15,6.4.1.2	ko:K01963	ko00061,ko00620,ko00640,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00061,map00620,map00640,map00720,map01100,map01110,map01120,map01130,map01200,map01212	M00082,M00376	R00742,R04386	RC00040,RC00253,RC00367	ko00000,ko00001,ko00002,ko01000	-	-	-	Carboxyl_trans
BYD3_k127_5849080_13	1453500.AT05_00595	7.014e-186	585.0	COG1830@1|root,COG1830@2|Bacteria,4NEUM@976|Bacteroidetes,1HZ0Q@117743|Flavobacteriia	976|Bacteroidetes	G	PFAM DeoC LacD family aldolase	fbaB	-	4.1.2.13	ko:K11645	ko00010,ko00030,ko00051,ko00680,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00030,map00051,map00680,map00710,map01100,map01110,map01120,map01130,map01200,map01230	M00001,M00003	R01068,R01070,R01829,R02568	RC00438,RC00439,RC00603,RC00604	ko00000,ko00001,ko00002,ko01000	-	-	-	DeoC
BYD3_k127_5849080_68	1279009.ADICEAN_01003	8.305e-53	189.0	COG0335@1|root,COG0335@2|Bacteria,4NNPW@976|Bacteroidetes,47QAS@768503|Cytophagia	976|Bacteroidetes	J	This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site	rplS	GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904	-	ko:K02884	ko03010,map03010	M00178	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_L19
BYD3_k127_5849080_40	1237149.C900_02829	8.703e-109	355.0	COG0336@1|root,COG0336@2|Bacteria,4NF2Q@976|Bacteroidetes,47MGG@768503|Cytophagia	976|Bacteroidetes	J	Belongs to the RNA methyltransferase TrmD family	trmD	GO:0001510,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008757,GO:0009019,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016423,GO:0016740,GO:0016741,GO:0016772,GO:0016779,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050518,GO:0070567,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360	2.1.1.228	ko:K00554	-	-	R00597	RC00003,RC00334	ko00000,ko01000,ko03016	-	-	-	tRNA_m1G_MT
BYD3_k127_5908202_0	1237149.C900_01411	1.134e-131	432.0	COG2843@1|root,COG2843@2|Bacteria,4NI6J@976|Bacteroidetes,47NKK@768503|Cytophagia	976|Bacteroidetes	M	Bacterial capsule synthesis protein PGA_cap	-	-	-	ko:K07282	-	-	-	-	ko00000	-	-	-	PGA_cap
BYD3_k127_5908202_1	643867.Ftrac_2908	6.36e-48	173.0	COG0789@1|root,COG0789@2|Bacteria,4NSBD@976|Bacteroidetes,47QJY@768503|Cytophagia	976|Bacteroidetes	K	transcriptional regulator	ycgE	-	-	-	-	-	-	-	-	-	-	-	MerR_1
BYD3_k127_5908202_2	1237149.C900_01409	8.732e-42	158.0	COG0758@1|root,COG0758@2|Bacteria,4NF7T@976|Bacteroidetes,47M2T@768503|Cytophagia	976|Bacteroidetes	LU	TIGRFAM DNA protecting protein DprA	dprA	-	-	ko:K04096	-	-	-	-	ko00000	-	-	-	DNA_processg_A,HHH_5
BYD3_k127_5935178_10	530564.Psta_2974	5.571e-51	191.0	COG0657@1|root,COG0657@2|Bacteria,2IZIV@203682|Planctomycetes	203682|Planctomycetes	I	alpha/beta hydrolase fold	-	-	-	-	-	-	-	-	-	-	-	-	Abhydrolase_3
BYD3_k127_5935178_0	1123248.KB893321_gene551	8.305e-136	440.0	COG2141@1|root,COG2141@2|Bacteria,4NDW2@976|Bacteroidetes,1IRCN@117747|Sphingobacteriia	976|Bacteroidetes	C	Luciferase-like monooxygenase	-	-	-	-	-	-	-	-	-	-	-	-	Bac_luciferase
BYD3_k127_5935178_8	880070.Cycma_3447	5.123e-57	201.0	COG0346@1|root,COG0346@2|Bacteria,4NNKT@976|Bacteroidetes,47Q78@768503|Cytophagia	976|Bacteroidetes	E	lactoylglutathione lyase activity	-	-	-	-	-	-	-	-	-	-	-	-	Glyoxalase
BYD3_k127_5935178_5	504472.Slin_3963	4.862e-72	250.0	COG2159@1|root,COG2159@2|Bacteria,4NH6P@976|Bacteroidetes,47M0D@768503|Cytophagia	976|Bacteroidetes	S	Carbohydrate family 9 binding domain-like	-	-	-	-	-	-	-	-	-	-	-	-	CBM9_1
BYD3_k127_5935178_13	1323361.JPOC01000041_gene3590	1.629e-31	128.0	2EA47@1|root,33494@2|Bacteria,2GPU6@201174|Actinobacteria,4G2QV@85025|Nocardiaceae	201174|Actinobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	DUF1579
BYD3_k127_5935178_7	1123276.KB893265_gene4542	2.195e-63	225.0	COG2135@1|root,COG2135@2|Bacteria,4NI3T@976|Bacteroidetes,47XPZ@768503|Cytophagia	976|Bacteroidetes	S	Belongs to the SOS response-associated peptidase family	yoqW	-	-	-	-	-	-	-	-	-	-	-	SRAP
BYD3_k127_5935178_1	886377.Murru_3015	1.168e-111	368.0	COG2207@1|root,COG2207@2|Bacteria,4NGWC@976|Bacteroidetes,1I08M@117743|Flavobacteriia	976|Bacteroidetes	K	helix_turn_helix, arabinose operon control protein	-	-	-	-	-	-	-	-	-	-	-	-	HTH_18
BYD3_k127_5935178_12	509635.N824_01645	1.03e-38	151.0	COG3554@1|root,COG3554@2|Bacteria,4NTFB@976|Bacteroidetes,1IZ90@117747|Sphingobacteriia	976|Bacteroidetes	S	Putative glycolipid-binding	-	-	-	ko:K09957	-	-	-	-	ko00000	-	-	-	Glycolipid_bind
BYD3_k127_5935178_11	1123248.KB893370_gene5153	1.417e-42	158.0	COG1359@1|root,COG1359@2|Bacteria,4P3Z8@976|Bacteroidetes	976|Bacteroidetes	S	(4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase activity	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_5935178_3	926549.KI421517_gene1068	5.169e-91	304.0	COG3665@1|root,COG3665@2|Bacteria,4NGIF@976|Bacteroidetes,47Q2I@768503|Cytophagia	976|Bacteroidetes	S	Domain of unknown function (DUF1989)	-	-	-	ko:K09967	-	-	-	-	ko00000	-	-	-	DUF1989
BYD3_k127_5935178_4	491205.JARQ01000007_gene3086	6.566e-80	271.0	COG3403@1|root,COG3403@2|Bacteria,4NH39@976|Bacteroidetes,1HZXP@117743|Flavobacteriia,3ZSE8@59732|Chryseobacterium	976|Bacteroidetes	S	YqcI/YcgG family	-	-	-	ko:K09190	-	-	-	-	ko00000	-	-	-	YqcI_YcgG
BYD3_k127_5935178_2	531844.FIC_01707	6.395e-111	371.0	COG0189@1|root,COG0189@2|Bacteria,4NH4U@976|Bacteroidetes,1HZ4Y@117743|Flavobacteriia	976|Bacteroidetes	HJ	ligase activity	-	-	-	-	-	-	-	-	-	-	-	-	RimK
BYD3_k127_5935178_6	886377.Murru_3015	1.34e-65	235.0	COG2207@1|root,COG2207@2|Bacteria,4NGWC@976|Bacteroidetes,1I08M@117743|Flavobacteriia	976|Bacteroidetes	K	helix_turn_helix, arabinose operon control protein	-	-	-	-	-	-	-	-	-	-	-	-	HTH_18
BYD3_k127_5935178_9	861299.J421_1886	3.233e-56	203.0	COG1960@1|root,COG1960@2|Bacteria	2|Bacteria	I	acyl-CoA dehydrogenase activity	-	-	1.14.13.235	ko:K22027	-	-	-	-	ko00000,ko01000	-	-	-	Acyl-CoA_dh_2,Acyl-CoA_dh_N
BYD3_k127_5978717_1	1356852.N008_17480	5.151e-50	185.0	2BUGV@1|root,32PSV@2|Bacteria,4P6RM@976|Bacteroidetes	976|Bacteroidetes	S	Glyoxalase-like domain	-	-	-	-	-	-	-	-	-	-	-	-	Glyoxalase_3
BYD3_k127_5978717_0	1121904.ARBP01000005_gene4629	7.056e-132	436.0	COG0577@1|root,COG0577@2|Bacteria,4NDUK@976|Bacteroidetes,47NTJ@768503|Cytophagia	976|Bacteroidetes	V	MacB-like periplasmic core domain	-	-	-	-	-	-	-	-	-	-	-	-	FtsX,MacB_PCD
BYD3_k127_6076280_108	1121481.AUAS01000002_gene3198	1.74e-42	157.0	COG3828@1|root,COG3828@2|Bacteria,4NI7K@976|Bacteroidetes,47N09@768503|Cytophagia	976|Bacteroidetes	S	Trehalose utilisation	-	-	-	-	-	-	-	-	-	-	-	-	ThuA
BYD3_k127_6076280_79	376686.Fjoh_4606	1.583e-93	317.0	COG0596@1|root,COG0596@2|Bacteria,4NPF5@976|Bacteroidetes,1IGNY@117743|Flavobacteriia,2NYP1@237|Flavobacterium	976|Bacteroidetes	S	Alpha/beta hydrolase family	-	-	-	-	-	-	-	-	-	-	-	-	Abhydrolase_1,Hydrolase_4
BYD3_k127_6076280_112	929556.Solca_1011	1.063e-31	125.0	COG0640@1|root,COG0640@2|Bacteria,4NUW3@976|Bacteroidetes,1IZCR@117747|Sphingobacteriia	976|Bacteroidetes	K	helix_turn_helix, Arsenical Resistance Operon Repressor	-	-	-	ko:K03892	-	-	-	-	ko00000,ko03000	-	-	-	HTH_20
BYD3_k127_6076280_71	929556.Solca_1012	7.574e-102	342.0	COG0845@1|root,COG0845@2|Bacteria,4NF3H@976|Bacteroidetes,1ISID@117747|Sphingobacteriia	976|Bacteroidetes	M	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family	-	-	-	ko:K03585	ko01501,ko01503,map01501,map01503	M00646,M00647,M00699,M00718	-	-	ko00000,ko00001,ko00002,ko01504,ko02000,ko03036	2.A.6.2,8.A.1.6	-	-	HlyD_D23
BYD3_k127_6076280_0	929556.Solca_1013	0.0	1629.0	COG0841@1|root,COG0841@2|Bacteria,4NDZG@976|Bacteroidetes,1INYC@117747|Sphingobacteriia	976|Bacteroidetes	V	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family	-	-	-	ko:K18138	ko01501,ko01503,map01501,map01503	M00647,M00699,M00718	-	-	ko00000,ko00001,ko00002,ko01504,ko02000	2.A.6.2	-	-	ACR_tran
BYD3_k127_6076280_64	929556.Solca_1014	8.333e-110	370.0	COG1538@1|root,COG1538@2|Bacteria,4NF4X@976|Bacteroidetes,1ISIM@117747|Sphingobacteriia	976|Bacteroidetes	MU	outer membrane efflux protein	-	-	-	-	-	-	-	-	-	-	-	-	OEP
BYD3_k127_6076280_22	1123248.KB893325_gene1223	6.486e-235	739.0	COG2010@1|root,COG2133@1|root,COG2010@2|Bacteria,COG2133@2|Bacteria,4NIKG@976|Bacteroidetes,1IWUH@117747|Sphingobacteriia	976|Bacteroidetes	C	Glucose / Sorbosone dehydrogenase	-	-	-	-	-	-	-	-	-	-	-	-	Cytochrom_C,GSDH
BYD3_k127_6076280_70	1121875.KB907547_gene3048	6.455e-102	340.0	COG0596@1|root,COG0596@2|Bacteria,4NZUP@976|Bacteroidetes,1HZ6I@117743|Flavobacteriia	976|Bacteroidetes	S	Releases the N-terminal proline from various substrates	-	-	3.4.11.5	ko:K01259	ko00330,map00330	-	R00135	-	ko00000,ko00001,ko01000,ko01002	-	-	-	Abhydrolase_1
BYD3_k127_6076280_90	118161.KB235922_gene5774	1.328e-75	257.0	COG1670@1|root,COG1670@2|Bacteria,1G59B@1117|Cyanobacteria,3VKXA@52604|Pleurocapsales	1117|Cyanobacteria	J	Acetyltransferase (GNAT) domain	-	-	2.3.1.82	ko:K00663	-	-	-	-	ko00000,ko01000,ko01504	-	-	-	Acetyltransf_8
BYD3_k127_6076280_91	234267.Acid_5924	3.391e-75	268.0	COG3386@1|root,COG3391@1|root,COG3386@2|Bacteria,COG3391@2|Bacteria,3Y3S3@57723|Acidobacteria	57723|Acidobacteria	G	PFAM NHL repeat containing protein	-	-	-	ko:K13735	ko05100,map05100	-	-	-	ko00000,ko00001	-	-	-	NHL
BYD3_k127_6076280_50	1121481.AUAS01000013_gene4231	2.738e-137	456.0	COG1503@1|root,COG1503@2|Bacteria,4NHJS@976|Bacteroidetes,47Q5X@768503|Cytophagia	976|Bacteroidetes	J	translation release factor activity	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_6076280_85	1237149.C900_04340	3.906e-82	282.0	COG1266@1|root,COG1266@2|Bacteria,4NJAV@976|Bacteroidetes,47M12@768503|Cytophagia	976|Bacteroidetes	S	CAAX protease self-immunity	-	-	-	-	-	-	-	-	-	-	-	-	Abi
BYD3_k127_6076280_94	926549.KI421517_gene3641	1.937e-64	226.0	COG0424@1|root,COG0424@2|Bacteria,4NNXV@976|Bacteroidetes,47JTY@768503|Cytophagia	976|Bacteroidetes	D	Maf-like protein	maf	-	-	ko:K06287	-	-	-	-	ko00000	-	-	-	Maf
BYD3_k127_6076280_60	1237149.C900_00260	6.232e-116	398.0	28M1N@1|root,2ZAGE@2|Bacteria,4NIDD@976|Bacteroidetes,47JC7@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_6076280_81	1237149.C900_00261	5.461e-87	294.0	COG2815@1|root,COG2815@2|Bacteria,4NSUI@976|Bacteroidetes,47KQI@768503|Cytophagia	976|Bacteroidetes	S	PFAM PASTA domain	spk1	-	2.7.11.1,6.3.2.4	ko:K01921,ko:K08884,ko:K12132	ko00473,ko00550,ko01100,ko01502,map00473,map00550,map01100,map01502	-	R01150	RC00064,RC00141	ko00000,ko00001,ko01000,ko01001,ko01011	-	-	-	PASTA
BYD3_k127_6076280_51	1237149.C900_00262	3.171e-132	431.0	COG1181@1|root,COG1181@2|Bacteria,4NE9P@976|Bacteroidetes,47M8U@768503|Cytophagia	976|Bacteroidetes	F	Belongs to the D-alanine--D-alanine ligase family	ddl	-	6.3.2.4	ko:K01921	ko00473,ko00550,ko01100,ko01502,map00473,map00550,map01100,map01502	-	R01150	RC00064,RC00141	ko00000,ko00001,ko01000,ko01011	-	-	-	Dala_Dala_lig_C,Dala_Dala_lig_N
BYD3_k127_6076280_20	1237149.C900_00263	7.496e-240	776.0	COG1404@1|root,COG3291@1|root,COG1404@2|Bacteria,COG3291@2|Bacteria,4NGRJ@976|Bacteroidetes,47JD6@768503|Cytophagia	976|Bacteroidetes	O	PFAM Pregnancy-associated plasma protein-A	fpp2	-	-	-	-	-	-	-	-	-	-	-	Peptidase_M43
BYD3_k127_6076280_115	1237149.C900_00264	7.21e-26	108.0	COG0694@1|root,COG0694@2|Bacteria,4NSHJ@976|Bacteroidetes,47RA0@768503|Cytophagia	976|Bacteroidetes	O	NifU domain protein	nfuA	-	-	-	-	-	-	-	-	-	-	-	NifU
BYD3_k127_6076280_39	1237149.C900_00265	4.374e-183	578.0	COG0489@1|root,COG0489@2|Bacteria,4NF5I@976|Bacteroidetes,47JZ3@768503|Cytophagia	976|Bacteroidetes	D	Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP	mrp	-	-	ko:K03593	-	-	-	-	ko00000,ko03029,ko03036	-	-	-	FeS_assembly_P,ParA
BYD3_k127_6076280_31	1237149.C900_00266	1.906e-216	690.0	COG0358@1|root,COG0358@2|Bacteria,4NENT@976|Bacteroidetes,47K9B@768503|Cytophagia	976|Bacteroidetes	L	RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication	dnaG	-	-	ko:K02316	ko03030,map03030	-	-	-	ko00000,ko00001,ko01000,ko03032	-	-	-	DnaB_bind,Toprim_2,Toprim_4,Toprim_N,zf-CHC2
BYD3_k127_6076280_28	1237149.C900_05672	4.346e-223	695.0	COG0108@1|root,COG0807@1|root,COG0108@2|Bacteria,COG0807@2|Bacteria,4NF6I@976|Bacteroidetes,47KP9@768503|Cytophagia	976|Bacteroidetes	H	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate	ribBA	-	3.5.4.25,4.1.99.12	ko:K14652	ko00740,ko00790,ko01100,ko01110,map00740,map00790,map01100,map01110	M00125,M00840	R00425,R07281	RC00293,RC01792,RC01815,RC02504	ko00000,ko00001,ko00002,ko01000	-	-	-	DHBP_synthase,GTP_cyclohydro2
BYD3_k127_6076280_101	1237149.C900_05671	7.705e-55	199.0	2CYF8@1|root,32T43@2|Bacteria,4NUAU@976|Bacteroidetes,47RBY@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_6076280_52	1237149.C900_05670	4.874e-132	426.0	COG0496@1|root,COG0496@2|Bacteria,4NEJ5@976|Bacteroidetes,47JN8@768503|Cytophagia	976|Bacteroidetes	S	Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates	surE	-	3.1.3.5	ko:K03787	ko00230,ko00240,ko00760,ko01100,ko01110,map00230,map00240,map00760,map01100,map01110	-	R00183,R00511,R00963,R01126,R01227,R01569,R01664,R01968,R02088,R02102,R02323,R02719,R03346	RC00017	ko00000,ko00001,ko01000	-	-	-	SurE
BYD3_k127_6076280_121	991.IW20_11265	7.15e-12	76.0	COG3637@1|root,COG3637@2|Bacteria,4NN1G@976|Bacteroidetes,1IIEJ@117743|Flavobacteriia,2NUUV@237|Flavobacterium	976|Bacteroidetes	M	Outer membrane protein beta-barrel domain	-	-	-	-	-	-	-	-	-	-	-	-	OMP_b-brl
BYD3_k127_6076280_12	313606.M23134_05439	6.643e-287	903.0	COG1198@1|root,COG1198@2|Bacteria,4NFHB@976|Bacteroidetes,47K5C@768503|Cytophagia	976|Bacteroidetes	L	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA	priA	-	-	ko:K04066	ko03440,map03440	-	-	-	ko00000,ko00001,ko01000,ko03400	-	-	-	DEAD,Helicase_C,ResIII
BYD3_k127_6076280_27	1123008.KB905693_gene1405	1.093e-225	707.0	COG3669@1|root,COG3669@2|Bacteria,4NEDX@976|Bacteroidetes,2FNFV@200643|Bacteroidia,22WIN@171551|Porphyromonadaceae	976|Bacteroidetes	G	F5 8 type C domain protein	-	-	3.2.1.51	ko:K01206	ko00511,map00511	-	-	-	ko00000,ko00001,ko01000,ko04147	-	GH29	-	Alpha_L_fucos,CHB_HEX_C_1,F5_F8_type_C,Fn3_assoc
BYD3_k127_6076280_25	926549.KI421517_gene1914	2.028e-227	722.0	COG1331@1|root,COG1331@2|Bacteria,4NFE2@976|Bacteroidetes,47M2A@768503|Cytophagia	976|Bacteroidetes	O	COGs COG1331 Highly conserved protein containing a thioredoxin domain	-	-	-	ko:K06888	-	-	-	-	ko00000	-	-	-	GlcNAc_2-epim,Thioredox_DsbH
BYD3_k127_6076280_69	1237149.C900_05209	6.288e-104	347.0	COG2755@1|root,COG2755@2|Bacteria,4NFN6@976|Bacteroidetes,47JI4@768503|Cytophagia	976|Bacteroidetes	E	PFAM GSCFA family	-	-	-	-	-	-	-	-	-	-	-	-	GSCFA
BYD3_k127_6076280_8	1237149.C900_00549	9.056e-309	956.0	COG0363@1|root,COG2120@1|root,COG0363@2|Bacteria,COG2120@2|Bacteria,4NDUN@976|Bacteroidetes,47KPX@768503|Cytophagia	976|Bacteroidetes	G	Glucosamine-6-phosphate isomerase	nagB	-	3.5.99.6	ko:K02564	ko00520,ko01100,map00520,map01100	-	R00765	RC00163	ko00000,ko00001,ko01000	-	-	-	Glucosamine_iso,PIG-L
BYD3_k127_6076280_55	700598.Niako_6357	3.11e-124	405.0	COG1305@1|root,COG1305@2|Bacteria,4NF4N@976|Bacteroidetes,1IPWA@117747|Sphingobacteriia	976|Bacteroidetes	E	COGs COG1305 Transglutaminase-like protein	-	-	-	-	-	-	-	-	-	-	-	-	Bact_transglu_N,Transglut_core
BYD3_k127_6076280_61	714943.Mucpa_2632	8.811e-116	380.0	COG2307@1|root,COG2307@2|Bacteria,4NHIB@976|Bacteroidetes,1IR0B@117747|Sphingobacteriia	976|Bacteroidetes	S	A predicted alpha-helical domain with a conserved ER motif.	-	-	-	-	-	-	-	-	-	-	-	-	Alpha-E
BYD3_k127_6076280_18	700598.Niako_6355	9.48e-257	797.0	COG2308@1|root,COG2308@2|Bacteria,4NFMN@976|Bacteroidetes,1INRP@117747|Sphingobacteriia	976|Bacteroidetes	S	Circularly permuted ATP-grasp type 2	-	-	-	-	-	-	-	-	-	-	-	-	CP_ATPgrasp_2
BYD3_k127_6076280_99	1237149.C900_05222	9.257e-58	204.0	COG0359@1|root,COG0359@2|Bacteria,4NNRP@976|Bacteroidetes,47PY1@768503|Cytophagia	976|Bacteroidetes	J	binds to the 23S rRNA	rplI	GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904	-	ko:K02939	ko03010,map03010	M00178	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_L9_C,Ribosomal_L9_N
BYD3_k127_6076280_109	1237149.C900_05223	3.435e-40	149.0	COG0238@1|root,COG0238@2|Bacteria,4NSAR@976|Bacteroidetes,47R23@768503|Cytophagia	976|Bacteroidetes	J	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit	rpsR	GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904	-	ko:K02963	ko03010,map03010	M00178	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_S18
BYD3_k127_6076280_104	1237149.C900_05224	5.552e-46	172.0	COG0360@1|root,COG0360@2|Bacteria,4NQ9W@976|Bacteroidetes,47QQD@768503|Cytophagia	976|Bacteroidetes	J	Binds together with S18 to 16S ribosomal RNA	rpsF	GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015935,GO:0019843,GO:0022626,GO:0022627,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0070181,GO:0097159,GO:1901363,GO:1990904	-	ko:K02990	ko03010,map03010	M00178	-	-	br01610,ko00000,ko00001,ko00002,ko03011,ko03029	-	-	-	Ribosomal_S6
BYD3_k127_6076280_5	929562.Emtol_0720	0.0	1030.0	COG2010@1|root,COG2010@2|Bacteria,4NFP6@976|Bacteroidetes,47JRP@768503|Cytophagia	976|Bacteroidetes	C	Protein of unknown function (DUF1549)	-	-	-	-	-	-	-	-	-	-	-	-	CBM_6,PSCyt1,PSCyt2,PSD1
BYD3_k127_6076280_19	525373.HMPREF0766_13832	1.977e-248	773.0	COG3119@1|root,COG3119@2|Bacteria,4NGVK@976|Bacteroidetes,1J0S3@117747|Sphingobacteriia	976|Bacteroidetes	P	Protein of unknown function (DUF1501)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1501
BYD3_k127_6076280_58	929703.KE386491_gene3904	1.011e-118	388.0	COG1082@1|root,COG1082@2|Bacteria,4NFEA@976|Bacteroidetes,47K3N@768503|Cytophagia	976|Bacteroidetes	G	Xylose isomerase domain protein TIM barrel	-	-	-	-	-	-	-	-	-	-	-	-	AP_endonuc_2
BYD3_k127_6076280_63	509635.N824_17445	4.115e-112	378.0	COG4886@1|root,COG4886@2|Bacteria,4NFES@976|Bacteroidetes,1IPVN@117747|Sphingobacteriia	976|Bacteroidetes	S	Planctomycete cytochrome C	-	-	-	-	-	-	-	-	-	-	-	-	LRR_8,PSCyt1
BYD3_k127_6076280_84	1185876.BN8_00314	2.281e-85	289.0	COG0398@1|root,COG0398@2|Bacteria,4NIT2@976|Bacteroidetes,47KFE@768503|Cytophagia	976|Bacteroidetes	S	Protein of unknown function, DUF547	-	-	-	-	-	-	-	-	-	-	-	-	DUF547
BYD3_k127_6076280_88	1089547.KB913013_gene3356	3.5e-76	262.0	COG1215@1|root,COG1215@2|Bacteria,4NF6C@976|Bacteroidetes,47YKI@768503|Cytophagia	976|Bacteroidetes	M	Glycosyl transferase family 2	-	-	-	-	-	-	-	-	-	-	-	-	Glycos_transf_2
BYD3_k127_6076280_66	1237149.C900_05228	2.104e-108	361.0	COG1196@1|root,COG1196@2|Bacteria,4NHAC@976|Bacteroidetes,47MGD@768503|Cytophagia	976|Bacteroidetes	D	nuclear chromosome segregation	-	-	-	ko:K09892	-	-	-	-	ko00000,ko03036	-	-	-	-
BYD3_k127_6076280_93	1237149.C900_05946	6.951e-69	242.0	COG4122@1|root,COG4122@2|Bacteria,4NG1S@976|Bacteroidetes,47N8Y@768503|Cytophagia	976|Bacteroidetes	S	Methyltransferase domain	-	-	-	-	-	-	-	-	-	-	-	-	Methyltransf_24
BYD3_k127_6076280_96	1237149.C900_05945	1.519e-62	217.0	COG2967@1|root,COG2967@2|Bacteria,4NNRA@976|Bacteroidetes,47PP3@768503|Cytophagia	976|Bacteroidetes	P	protein affecting Mg2 Co2 transport	apaG	-	-	ko:K06195	-	-	-	-	ko00000	-	-	-	DUF525
BYD3_k127_6076280_62	1237149.C900_05944	5.306e-114	372.0	COG0692@1|root,COG0692@2|Bacteria,4NE2B@976|Bacteroidetes,47JRB@768503|Cytophagia	976|Bacteroidetes	L	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine	ung	GO:0003674,GO:0003824,GO:0004844,GO:0006139,GO:0006259,GO:0006281,GO:0006284,GO:0006285,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016787,GO:0016798,GO:0016799,GO:0019104,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097506,GO:0097510,GO:0140097,GO:1901360	3.2.2.27	ko:K03648	ko03410,ko05340,map03410,map05340	-	-	-	ko00000,ko00001,ko01000,ko03400	-	-	-	UDG
BYD3_k127_6076280_47	1237149.C900_05943	3.506e-144	468.0	COG0681@1|root,COG0681@2|Bacteria,4NFTP@976|Bacteroidetes,47JH7@768503|Cytophagia	976|Bacteroidetes	U	Belongs to the peptidase S26 family	lepB	-	3.4.21.89	ko:K03100	ko02024,ko03060,map02024,map03060	-	-	-	ko00000,ko00001,ko01000,ko01002	-	-	-	Peptidase_S24,Peptidase_S26
BYD3_k127_6076280_78	1237149.C900_05942	3.813e-94	314.0	COG0289@1|root,COG0289@2|Bacteria,4NDX2@976|Bacteroidetes,47KG4@768503|Cytophagia	976|Bacteroidetes	E	Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate	dapB	-	1.17.1.8	ko:K00215	ko00261,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00261,map00300,map01100,map01110,map01120,map01130,map01230	M00016,M00525,M00526,M00527	R04198,R04199	RC00478	ko00000,ko00001,ko00002,ko01000	-	-	-	DapB_C,DapB_N
BYD3_k127_6076280_102	1237149.C900_05941	2.628e-47	177.0	28PR3@1|root,2ZCD0@2|Bacteria,4NMAF@976|Bacteroidetes,47RVI@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_6076280_57	1237149.C900_05940	5.338e-119	389.0	COG1475@1|root,COG1475@2|Bacteria,4NFZ9@976|Bacteroidetes,47K9I@768503|Cytophagia	976|Bacteroidetes	K	Belongs to the ParB family	parB	-	-	ko:K03497	-	-	-	-	ko00000,ko03000,ko03036,ko04812	-	-	-	ParBc
BYD3_k127_6076280_53	1237149.C900_05939	2.213e-130	419.0	COG1192@1|root,COG1192@2|Bacteria,4NFEX@976|Bacteroidetes,47JM3@768503|Cytophagia	976|Bacteroidetes	D	PFAM CobQ CobB MinD ParA nucleotide binding domain	soj	-	-	ko:K03496	-	-	-	-	ko00000,ko03036,ko04812	-	-	-	AAA_31
BYD3_k127_6076280_36	1237149.C900_05937	3.86e-193	620.0	COG0706@1|root,COG0706@2|Bacteria,4NESJ@976|Bacteroidetes,47KF7@768503|Cytophagia	976|Bacteroidetes	U	Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins	yidC	-	-	ko:K03217	ko02024,ko03060,ko03070,map02024,map03060,map03070	M00335	-	-	ko00000,ko00001,ko00002,ko02044,ko03029	2.A.9	-	-	60KD_IMP,YidC_periplas
BYD3_k127_6076280_111	1237149.C900_05698	4.117e-38	147.0	COG0399@1|root,COG0399@2|Bacteria,4NVFZ@976|Bacteroidetes,47S2S@768503|Cytophagia	976|Bacteroidetes	J	23S rRNA-intervening sequence protein	-	-	-	-	-	-	-	-	-	-	-	-	23S_rRNA_IVP
BYD3_k127_6076280_10	1237149.C900_05936	1.727e-290	897.0	COG0504@1|root,COG0504@2|Bacteria,4NEWT@976|Bacteroidetes,47KXM@768503|Cytophagia	976|Bacteroidetes	F	Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates	pyrG	-	6.3.4.2	ko:K01937	ko00240,ko01100,map00240,map01100	M00052	R00571,R00573	RC00010,RC00074	ko00000,ko00001,ko00002,ko01000	-	-	-	CTP_synth_N,GATase
BYD3_k127_6076280_23	1237149.C900_05934	1.498e-234	812.0	COG3209@1|root,COG3291@1|root,COG3405@1|root,COG3209@2|Bacteria,COG3291@2|Bacteria,COG3405@2|Bacteria,4NDZC@976|Bacteroidetes,47MNQ@768503|Cytophagia	976|Bacteroidetes	O	SprB repeat	-	-	-	-	-	-	-	-	-	-	-	-	CHU_C,PKD,SprB
BYD3_k127_6076280_46	1237149.C900_05933	3.12e-145	467.0	COG4772@1|root,COG4772@2|Bacteria,4NG13@976|Bacteroidetes,47MUX@768503|Cytophagia	976|Bacteroidetes	P	TIGRFAM Bacteroidetes-specific	-	-	-	-	-	-	-	-	-	-	-	-	PorP_SprF
BYD3_k127_6076280_32	1048983.EL17_17975	2.582e-213	672.0	COG0617@1|root,COG0617@2|Bacteria,4NF1S@976|Bacteroidetes,47KFG@768503|Cytophagia	976|Bacteroidetes	J	Poly A polymerase head domain	cca	-	2.7.7.19,2.7.7.72	ko:K00970,ko:K00974	ko03013,ko03018,map03013,map03018	-	R09382,R09383,R09384,R09386	RC00078	ko00000,ko00001,ko01000,ko03016,ko03019	-	-	-	HD,PolyA_pol,PolyA_pol_RNAbd
BYD3_k127_6076280_95	1237149.C900_05058	4.228e-64	224.0	COG1595@1|root,COG1595@2|Bacteria,4NMAK@976|Bacteroidetes,47P7T@768503|Cytophagia	976|Bacteroidetes	K	TIGRFAM RNA polymerase sigma factor, sigma-70 family	-	-	-	ko:K03088	-	-	-	-	ko00000,ko03021	-	-	-	Sigma70_r2,Sigma70_r4_2
BYD3_k127_6076280_86	1356852.N008_18575	5.587e-82	277.0	COG0225@1|root,COG0225@2|Bacteria,4NMAJ@976|Bacteroidetes,47PB4@768503|Cytophagia	976|Bacteroidetes	O	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine	msrA	-	1.8.4.11	ko:K07304	-	-	-	-	ko00000,ko01000	-	-	-	PMSR
BYD3_k127_6076280_82	385682.AFSL01000073_gene1405	8.854e-87	300.0	COG3250@1|root,COG3250@2|Bacteria,4NN59@976|Bacteroidetes,2FQES@200643|Bacteroidia	976|Bacteroidetes	G	beta-galactosidase activity	-	-	-	-	-	-	-	-	-	-	-	-	BetaGal_dom4_5
BYD3_k127_6076280_77	1121904.ARBP01000002_gene7118	1.288e-94	321.0	COG3250@1|root,COG3250@2|Bacteria,4NN59@976|Bacteroidetes	976|Bacteroidetes	G	beta-galactosidase activity	-	-	-	-	-	-	-	-	-	-	-	-	BetaGal_dom4_5
BYD3_k127_6076280_54	1121904.ARBP01000009_gene4160	2.225e-129	424.0	COG1167@1|root,COG1167@2|Bacteria,4NG85@976|Bacteroidetes,47XME@768503|Cytophagia	976|Bacteroidetes	EK	Alanine-glyoxylate amino-transferase	-	-	-	ko:K00375,ko:K05825	ko00300,ko01100,ko01130,ko01210,map00300,map01100,map01130,map01210	-	R01939	RC00006	ko00000,ko00001,ko01000,ko03000	-	-	-	Aminotran_1_2,GntR
BYD3_k127_6076280_65	1123277.KB893174_gene5988	1.66e-109	359.0	2DB9K@1|root,2Z7XA@2|Bacteria,4NEDV@976|Bacteroidetes,47M5E@768503|Cytophagia	976|Bacteroidetes	S	phytanoyl-CoA dioxygenase	-	-	-	-	-	-	-	-	-	-	-	-	PhyH
BYD3_k127_6076280_43	1121904.ARBP01000015_gene179	1.41e-161	537.0	COG0577@1|root,COG0577@2|Bacteria,4NDUK@976|Bacteroidetes,47NTJ@768503|Cytophagia	976|Bacteroidetes	V	MacB-like periplasmic core domain	-	-	-	ko:K02004	-	M00258	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	FtsX,MacB_PCD
BYD3_k127_6076280_34	880526.KE386488_gene786	2.043e-206	668.0	COG3525@1|root,COG3525@2|Bacteria,4NEQN@976|Bacteroidetes,2FMUE@200643|Bacteroidia,22V00@171550|Rikenellaceae	976|Bacteroidetes	G	Domain of unknown function (DUF4838)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4838,F5_F8_type_C,Glyco_hydro_67N
BYD3_k127_6076280_41	760192.Halhy_3765	7.166e-173	548.0	COG0457@1|root,COG0457@2|Bacteria,4NEYK@976|Bacteroidetes,1IVUJ@117747|Sphingobacteriia	976|Bacteroidetes	S	Protein of unknown function (DUF2911)	-	-	-	-	-	-	-	-	-	-	-	-	DUF2911
BYD3_k127_6076280_59	471854.Dfer_1770	6.313e-117	383.0	COG0823@1|root,COG0823@2|Bacteria,4NIV7@976|Bacteroidetes,47PKV@768503|Cytophagia	976|Bacteroidetes	U	WD40-like Beta Propeller Repeat	-	-	-	-	-	-	-	-	-	-	-	-	PD40
BYD3_k127_6076280_106	1237149.C900_03951	2.284e-44	164.0	COG1695@1|root,COG1695@2|Bacteria,4NQJP@976|Bacteroidetes,47QWB@768503|Cytophagia	976|Bacteroidetes	K	Transcriptional regulator PadR-like family	-	-	-	-	-	-	-	-	-	-	-	-	PadR
BYD3_k127_6076280_3	1121904.ARBP01000030_gene1964	0.0	1056.0	COG0577@1|root,COG0577@2|Bacteria,4NDUK@976|Bacteroidetes,47MYR@768503|Cytophagia	976|Bacteroidetes	V	MacB-like periplasmic core domain	-	-	-	-	-	-	-	-	-	-	-	-	FtsX,MacB_PCD
BYD3_k127_6076280_7	1121904.ARBP01000013_gene426	4.739e-319	998.0	COG0577@1|root,COG0577@2|Bacteria,4NDUK@976|Bacteroidetes,47NE2@768503|Cytophagia	976|Bacteroidetes	V	MacB-like periplasmic core domain	-	-	-	-	-	-	-	-	-	-	-	-	FtsX,MacB_PCD
BYD3_k127_6076280_16	761193.Runsl_1961	5.14e-271	859.0	COG0577@1|root,COG0577@2|Bacteria,4NDUK@976|Bacteroidetes,47JU6@768503|Cytophagia	976|Bacteroidetes	V	MacB-like periplasmic core domain	-	-	-	-	-	-	-	-	-	-	-	-	FtsX,MacB_PCD
BYD3_k127_6076280_4	926549.KI421517_gene2412	0.0	1038.0	COG0577@1|root,COG0577@2|Bacteria,4NDUK@976|Bacteroidetes,47JJN@768503|Cytophagia	976|Bacteroidetes	V	FtsX-like permease family	-	-	-	ko:K02004	-	M00258	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	FtsX,MacB_PCD
BYD3_k127_6076280_126	1237149.C900_03950	2.388e-05	49.0	COG0577@1|root,COG0577@2|Bacteria,4NDUK@976|Bacteroidetes,47JJN@768503|Cytophagia	976|Bacteroidetes	V	FtsX-like permease family	-	-	-	-	-	-	-	-	-	-	-	-	FtsX,MacB_PCD
BYD3_k127_6076280_13	926556.Echvi_3398	2.92e-284	890.0	COG1554@1|root,COG1554@2|Bacteria,4NFYU@976|Bacteroidetes,47K3P@768503|Cytophagia	976|Bacteroidetes	G	hydrolase, family 65, central catalytic	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_6076280_29	926549.KI421517_gene2782	5.96e-223	699.0	COG0673@1|root,COG0673@2|Bacteria,4NIF1@976|Bacteroidetes,47JIW@768503|Cytophagia	976|Bacteroidetes	S	Oxidoreductase family, C-terminal alpha beta domain	-	-	-	-	-	-	-	-	-	-	-	-	GFO_IDH_MocA,GFO_IDH_MocA_C
BYD3_k127_6076280_68	509635.N824_15675	1.413e-104	346.0	COG3828@1|root,COG3828@2|Bacteria,4NG55@976|Bacteroidetes,1IRYU@117747|Sphingobacteriia	976|Bacteroidetes	S	Trehalose utilisation	-	-	-	-	-	-	-	-	-	-	-	-	ThuA
BYD3_k127_6076280_73	1123057.P872_15775	2.347e-98	327.0	COG4221@1|root,COG4221@2|Bacteria,4NFSY@976|Bacteroidetes,47KFB@768503|Cytophagia	976|Bacteroidetes	S	Belongs to the short-chain dehydrogenases reductases (SDR) family	-	-	-	-	-	-	-	-	-	-	-	-	adh_short
BYD3_k127_6076280_116	421531.IX38_14485	2.173e-25	108.0	COG0477@1|root,COG2814@2|Bacteria,4NUYS@976|Bacteroidetes,1I53U@117743|Flavobacteriia,3ZS79@59732|Chryseobacterium	976|Bacteroidetes	EGP	Domain of unknown function (DUF3817)	ydzA	-	-	-	-	-	-	-	-	-	-	-	DUF3817
BYD3_k127_6076280_87	1124780.ANNU01000005_gene2415	1.263e-77	265.0	COG0755@1|root,COG0755@2|Bacteria,4NFUS@976|Bacteroidetes,47MYQ@768503|Cytophagia	976|Bacteroidetes	O	PFAM Cytochrome c assembly protein	ccmC	-	-	ko:K02195	ko02010,map02010	M00259	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.107	-	-	Cytochrom_C_asm
BYD3_k127_6076280_122	509635.N824_17785	1.424e-08	59.0	2BZQ6@1|root,339SI@2|Bacteria,4NXJG@976|Bacteroidetes,1IU7C@117747|Sphingobacteriia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_6076280_74	414684.RC1_2143	1.361e-97	330.0	COG4638@1|root,COG4638@2|Bacteria,1MX47@1224|Proteobacteria,2VG2H@28211|Alphaproteobacteria,2JZP7@204441|Rhodospirillales	204441|Rhodospirillales	P	Rieske [2Fe-2S] domain	-	-	-	-	-	-	-	-	-	-	-	-	Rieske
BYD3_k127_6076280_44	929713.NIASO_00615	3.082e-161	515.0	COG0673@1|root,COG0673@2|Bacteria,4NFMS@976|Bacteroidetes,1IREZ@117747|Sphingobacteriia	976|Bacteroidetes	S	Oxidoreductase	-	-	-	-	-	-	-	-	-	-	-	-	GFO_IDH_MocA,GFO_IDH_MocA_C
BYD3_k127_6076280_38	1123073.KB899241_gene2380	1.623e-188	593.0	COG1082@1|root,COG1082@2|Bacteria,1MVSJ@1224|Proteobacteria,1RRKK@1236|Gammaproteobacteria,1X42U@135614|Xanthomonadales	135614|Xanthomonadales	G	AP endonuclease family 2 C terminus	-	-	-	-	-	-	-	-	-	-	-	-	AP_endonuc_2,AP_endonuc_2_N
BYD3_k127_6076280_114	485918.Cpin_7278	3.08e-27	116.0	COG4654@1|root,COG4654@2|Bacteria,4NTWJ@976|Bacteroidetes	976|Bacteroidetes	C	Cytochrome c	-	-	-	ko:K08738	ko00920,ko01100,ko01120,ko01524,ko02020,ko04115,ko04210,ko04214,ko04215,ko04932,ko05010,ko05012,ko05014,ko05016,ko05134,ko05145,ko05152,ko05161,ko05164,ko05167,ko05168,ko05200,ko05210,ko05222,ko05416,map00920,map01100,map01120,map01524,map02020,map04115,map04210,map04214,map04215,map04932,map05010,map05012,map05014,map05016,map05134,map05145,map05152,map05161,map05164,map05167,map05168,map05200,map05210,map05222,map05416	M00595	R10151	RC03151,RC03152	ko00000,ko00001,ko00002	3.D.4.6	-	-	Cytochrom_C
BYD3_k127_6076280_80	1237149.C900_01360	2.405e-92	311.0	COG2133@1|root,COG4654@1|root,COG2133@2|Bacteria,COG4654@2|Bacteria,4NEMM@976|Bacteroidetes,47KXP@768503|Cytophagia	976|Bacteroidetes	CG	PFAM Cytochrome c, class I	-	-	-	ko:K08738	ko00920,ko01100,ko01120,ko01524,ko02020,ko04115,ko04210,ko04214,ko04215,ko04932,ko05010,ko05012,ko05014,ko05016,ko05134,ko05145,ko05152,ko05161,ko05164,ko05167,ko05168,ko05200,ko05210,ko05222,ko05416,map00920,map01100,map01120,map01524,map02020,map04115,map04210,map04214,map04215,map04932,map05010,map05012,map05014,map05016,map05134,map05145,map05152,map05161,map05164,map05167,map05168,map05200,map05210,map05222,map05416	M00595	R10151	RC03151,RC03152	ko00000,ko00001,ko00002	3.D.4.6	-	-	Cytochrom_C,DUF1080,PA14
BYD3_k127_6076280_2	761193.Runsl_4304	0.0	1102.0	COG2133@1|root,COG3291@1|root,COG3828@1|root,COG4654@1|root,COG2133@2|Bacteria,COG3291@2|Bacteria,COG3828@2|Bacteria,COG4654@2|Bacteria,4NDVK@976|Bacteroidetes,47MAT@768503|Cytophagia	976|Bacteroidetes	CG	Cytochrome c, class I	-	-	-	ko:K08738,ko:K09992	ko00920,ko01100,ko01120,ko01524,ko02020,ko04115,ko04210,ko04214,ko04215,ko04932,ko05010,ko05012,ko05014,ko05016,ko05134,ko05145,ko05152,ko05161,ko05164,ko05167,ko05168,ko05200,ko05210,ko05222,ko05416,map00920,map01100,map01120,map01524,map02020,map04115,map04210,map04214,map04215,map04932,map05010,map05012,map05014,map05016,map05134,map05145,map05152,map05161,map05164,map05167,map05168,map05200,map05210,map05222,map05416	M00595	R10151	RC03151,RC03152	ko00000,ko00001,ko00002	3.D.4.6	-	-	CBM_6,Cytochrom_C,Cytochrome_CBB3,GSDH,PKD,ThuA
BYD3_k127_6076280_89	1185876.BN8_00164	9.774e-76	263.0	COG1082@1|root,COG1082@2|Bacteria,4NJ3Z@976|Bacteroidetes,47NJ6@768503|Cytophagia	976|Bacteroidetes	G	Xylose isomerase domain protein TIM barrel	-	-	-	-	-	-	-	-	-	-	-	-	AP_endonuc_2
BYD3_k127_6076280_117	1237149.C900_01363	2.916e-23	104.0	2DZQQ@1|root,32VGE@2|Bacteria,4NYQ2@976|Bacteroidetes	976|Bacteroidetes	S	Transmembrane family 220, helix	-	-	-	-	-	-	-	-	-	-	-	-	TMEM220
BYD3_k127_6076280_26	1121904.ARBP01000004_gene1111	7.967e-226	714.0	COG0366@1|root,COG0366@2|Bacteria,4NEVK@976|Bacteroidetes,47JQH@768503|Cytophagia	976|Bacteroidetes	G	Alpha amylase, catalytic domain	amyA2	-	-	-	-	-	-	-	-	-	-	-	Alpha-amylase,tRNA_SAD
BYD3_k127_6076280_40	1124780.ANNU01000023_gene3232	1.844e-175	564.0	COG0366@1|root,COG0366@2|Bacteria,4NEXF@976|Bacteroidetes,47MR6@768503|Cytophagia	976|Bacteroidetes	G	PFAM Alpha amylase, catalytic	-	GO:0000272,GO:0000287,GO:0001871,GO:0003674,GO:0003824,GO:0004553,GO:0004556,GO:0005488,GO:0005509,GO:0005575,GO:0005975,GO:0005976,GO:0005982,GO:0005983,GO:0006073,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009251,GO:0009987,GO:0016020,GO:0016052,GO:0016160,GO:0016787,GO:0016798,GO:0019867,GO:0030246,GO:0030247,GO:0043167,GO:0043169,GO:0043170,GO:0044042,GO:0044237,GO:0044238,GO:0044247,GO:0044248,GO:0044260,GO:0044262,GO:0044264,GO:0044275,GO:0046872,GO:0071704,GO:1901575,GO:2001070	3.2.1.1,3.2.1.133,3.2.1.135,3.2.1.54	ko:K01176,ko:K01208	ko00500,ko01100,ko04973,map00500,map01100,map04973	-	R02108,R02112,R03122,R11262	-	ko00000,ko00001,ko01000	-	GH13	-	Alpha-amylase,BACON,DUF3459
BYD3_k127_6076280_21	1237149.C900_02045	1.787e-237	750.0	COG0366@1|root,COG0366@2|Bacteria,4NFMM@976|Bacteroidetes,47KUA@768503|Cytophagia	976|Bacteroidetes	G	Maltosyltransferase that uses maltose 1-phosphate (M1P) as the sugar donor to elongate linear or branched alpha-(1- 4)- glucans. Is involved in a branched alpha-glucan biosynthetic pathway from trehalose, together with TreS, Mak and GlgB	glgE	-	2.4.99.16	ko:K16147	ko00500,ko01100,map00500,map01100	-	R09994	-	ko00000,ko00001,ko01000	-	GH13	-	Alpha-amylase,DUF3416
BYD3_k127_6076280_1	1237149.C900_02046	0.0	1260.0	COG0366@1|root,COG3281@1|root,COG0366@2|Bacteria,COG3281@2|Bacteria,4NFE4@976|Bacteroidetes,47Y5G@768503|Cytophagia	976|Bacteroidetes	G	Maltogenic Amylase, C-terminal domain	-	-	3.2.1.1,5.4.99.16	ko:K05343	ko00500,ko01100,map00500,map01100	-	R01557,R02108,R02112,R11262	RC01816	ko00000,ko00001,ko01000	-	GH13	-	Alpha-amylase,Malt_amylase_C
BYD3_k127_6076280_9	929556.Solca_0452	4.812e-293	912.0	COG0296@1|root,COG0296@2|Bacteria,4NECZ@976|Bacteroidetes,1IQIR@117747|Sphingobacteriia	976|Bacteroidetes	G	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position	glgB	-	2.4.1.18	ko:K00700	ko00500,ko01100,ko01110,map00500,map01100,map01110	M00565	R02110	-	ko00000,ko00001,ko00002,ko01000,ko04147	-	CBM48,GH13	-	Alpha-amylase,Alpha-amylase_C,CBM_48
BYD3_k127_6076280_14	760192.Halhy_4486	1.814e-277	874.0	COG1449@1|root,COG1449@2|Bacteria,4NFKK@976|Bacteroidetes	976|Bacteroidetes	G	Belongs to the glycosyl hydrolase 57 family	-	-	-	-	-	-	-	-	-	-	-	-	DUF3536,Glyco_hydro_57
BYD3_k127_6076280_119	1121895.Q765_04800	2.896e-13	80.0	COG3011@1|root,COG3011@2|Bacteria,4NP4T@976|Bacteroidetes,1I5EQ@117743|Flavobacteriia,2NXX8@237|Flavobacterium	976|Bacteroidetes	S	Protein conserved in bacteria	-	-	-	-	-	-	-	-	-	-	-	-	VKG_Carbox
BYD3_k127_6076280_49	1237149.C900_00618	6.384e-140	451.0	COG1940@1|root,COG1940@2|Bacteria,4NFZ1@976|Bacteroidetes,47PAF@768503|Cytophagia	976|Bacteroidetes	G	ROK family	glk	-	2.7.1.2	ko:K00845	ko00010,ko00052,ko00500,ko00520,ko00521,ko00524,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00052,map00500,map00520,map00521,map00524,map01100,map01110,map01120,map01130,map01200	M00001,M00549	R00299,R01600,R01786	RC00002,RC00017	ko00000,ko00001,ko00002,ko01000	-	-	-	ROK
BYD3_k127_6076280_45	1237149.C900_00616	1.816e-149	478.0	COG0205@1|root,COG0205@2|Bacteria,4NF8F@976|Bacteroidetes,47M49@768503|Cytophagia	976|Bacteroidetes	G	Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis	pfkA	-	2.7.1.11	ko:K00850	ko00010,ko00030,ko00051,ko00052,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko03018,ko04152,ko05230,map00010,map00030,map00051,map00052,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map03018,map04152,map05230	M00001,M00345	R00756,R03236,R03237,R03238,R03239,R04779	RC00002,RC00017	ko00000,ko00001,ko00002,ko01000,ko01009,ko03019	-	-	-	PFK
BYD3_k127_6076280_17	926549.KI421517_gene2289	1.496e-260	813.0	COG0166@1|root,COG0166@2|Bacteria,4NDV0@976|Bacteroidetes,47JID@768503|Cytophagia	976|Bacteroidetes	G	Belongs to the GPI family	pgi	-	5.3.1.9	ko:K01810	ko00010,ko00030,ko00500,ko00520,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00030,map00500,map00520,map01100,map01110,map01120,map01130,map01200	M00001,M00004,M00114	R02739,R02740,R03321	RC00376,RC00563	ko00000,ko00001,ko00002,ko01000,ko04147	-	-	-	PGI
BYD3_k127_6076280_120	1121897.AUGO01000006_gene779	6.903e-13	83.0	COG1345@1|root,COG2374@1|root,COG2911@1|root,COG4447@1|root,COG1345@2|Bacteria,COG2374@2|Bacteria,COG2911@2|Bacteria,COG4447@2|Bacteria,4NGSK@976|Bacteroidetes,1HXWK@117743|Flavobacteriia,2P0S4@237|Flavobacterium	976|Bacteroidetes	N	Protein conserved in bacteria	-	-	-	-	-	-	-	-	-	-	-	-	He_PIG
BYD3_k127_6076280_103	1237149.C900_00773	3.6e-46	193.0	COG3209@1|root,COG3291@1|root,COG4932@1|root,COG3209@2|Bacteria,COG3291@2|Bacteria,COG4932@2|Bacteria	2|Bacteria	M	domain protein	espK	GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0016020,GO:0044424,GO:0044444,GO:0044464,GO:0071944	-	ko:K07004,ko:K18491,ko:K20276	ko02024,ko04550,map02024,map04550	-	-	-	ko00000,ko00001,ko03000	-	-	-	CHU_C,CarboxypepD_reg,PKD
BYD3_k127_6076280_75	1237149.C900_00774	2.601e-96	327.0	COG2885@1|root,COG2885@2|Bacteria	2|Bacteria	M	chlorophyll binding	-	-	-	-	-	-	-	-	-	-	-	-	DUF3575,OmpA,PD40
BYD3_k127_6076280_6	1237149.C900_01573	2.517e-320	996.0	COG2183@1|root,COG2183@2|Bacteria,4NETD@976|Bacteroidetes,47MKQ@768503|Cytophagia	976|Bacteroidetes	K	TIGRFAM competence protein ComEA helix-hairpin-helix repeat region	yhgF	-	-	ko:K06959	-	-	-	-	ko00000	-	-	-	HHH_3,S1,Tex_N,Tex_YqgF
BYD3_k127_6076280_98	515635.Dtur_0861	1.52e-58	206.0	COG1803@1|root,COG1803@2|Bacteria	2|Bacteria	G	methylglyoxal synthase activity	mgsA	GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006081,GO:0008150,GO:0008152,GO:0008929,GO:0009058,GO:0009438,GO:0009987,GO:0016829,GO:0016835,GO:0016838,GO:0019242,GO:0042180,GO:0042181,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046184,GO:0071704,GO:1901576	4.2.3.3	ko:K01734	ko00640,ko01120,map00640,map01120	-	R01016	RC00424	ko00000,ko00001,ko01000	-	-	iECUMN_1333.ECUMN_1153,iYL1228.KPN_00992	MGS
BYD3_k127_6076280_118	1038862.KB893805_gene4156	3.167e-18	90.0	COG3631@1|root,COG3631@2|Bacteria,1RDKP@1224|Proteobacteria,2U8HD@28211|Alphaproteobacteria,3JYXV@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	SnoaL-like domain	-	-	-	-	-	-	-	-	-	-	-	-	SnoaL_2
BYD3_k127_6076280_107	946077.W5A_02435	4.454e-43	166.0	COG1595@1|root,COG1595@2|Bacteria,4NEHC@976|Bacteroidetes,1HYVK@117743|Flavobacteriia	976|Bacteroidetes	K	Belongs to the sigma-70 factor family. ECF subfamily	-	-	-	ko:K03088	-	-	-	-	ko00000,ko03021	-	-	-	Sigma70_r2,Sigma70_r4_2
BYD3_k127_6076280_105	1237149.C900_04162	7.997e-46	168.0	COG4103@1|root,COG4103@2|Bacteria	2|Bacteria	T	Tellurite resistance protein TerB	-	-	-	-	-	-	-	-	-	-	-	-	Dynamin_N,TerB
BYD3_k127_6076280_42	926549.KI421517_gene1209	5.18e-172	550.0	COG0014@1|root,COG0014@2|Bacteria,4NEPQ@976|Bacteroidetes,47J99@768503|Cytophagia	976|Bacteroidetes	E	Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate	proA	GO:0003674,GO:0003824,GO:0004350,GO:0008150,GO:0008152,GO:0016491,GO:0016620,GO:0016903,GO:0055114	1.2.1.41	ko:K00147	ko00330,ko00332,ko01100,ko01110,ko01130,ko01230,map00330,map00332,map01100,map01110,map01130,map01230	M00015	R03313	RC00684	ko00000,ko00001,ko00002,ko01000	-	-	-	Aldedh
BYD3_k127_6076280_56	1121904.ARBP01000002_gene6934	7.381e-124	406.0	COG0263@1|root,COG0263@2|Bacteria,4NH75@976|Bacteroidetes,47KIA@768503|Cytophagia	976|Bacteroidetes	E	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate	proB	GO:0003674,GO:0003824,GO:0004349,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006560,GO:0006561,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016774,GO:0018130,GO:0019202,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607	2.7.2.11	ko:K00931	ko00330,ko00332,ko01100,ko01130,ko01230,map00330,map00332,map01100,map01130,map01230	M00015	R00239	RC00002,RC00043	ko00000,ko00001,ko00002,ko01000	-	-	-	AA_kinase,PUA
BYD3_k127_6076280_11	1237149.C900_04147	2.189e-290	915.0	COG2120@1|root,COG2120@2|Bacteria,4NE9K@976|Bacteroidetes,47KXK@768503|Cytophagia	976|Bacteroidetes	G	PFAM GlcNAc-PI de-N-acetylase	-	-	-	-	-	-	-	-	-	-	-	-	PIG-L
BYD3_k127_6076280_37	1124780.ANNU01000002_gene1612	1.08e-191	614.0	COG0591@1|root,COG0591@2|Bacteria,4NEN8@976|Bacteroidetes,47K2R@768503|Cytophagia	976|Bacteroidetes	E	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family	yidK	-	-	-	-	-	-	-	-	-	-	-	SSF
BYD3_k127_6076280_76	1056820.KB900700_gene1072	8.017e-96	318.0	COG1051@1|root,COG1051@2|Bacteria,1QTT4@1224|Proteobacteria,1RQ35@1236|Gammaproteobacteria,2PMWV@256005|Alteromonadales genera incertae sedis	1236|Gammaproteobacteria	F	NUDIX domain	nuhA	-	-	-	-	-	-	-	-	-	-	-	NUDIX
BYD3_k127_6076280_35	1121904.ARBP01000006_gene3710	2.496e-198	629.0	COG1070@1|root,COG1070@2|Bacteria,4NFBZ@976|Bacteroidetes,47KIK@768503|Cytophagia	976|Bacteroidetes	G	PFAM FGGY family of carbohydrate kinases, N-terminal domain	xylB_2	-	2.7.1.17	ko:K00854	ko00040,ko01100,map00040,map01100	M00014	R01639	RC00002,RC00538	ko00000,ko00001,ko00002,ko01000	-	-	-	FGGY_C,FGGY_N
BYD3_k127_6076280_30	700598.Niako_0966	5.684e-217	680.0	COG2115@1|root,COG2115@2|Bacteria,4NEBQ@976|Bacteroidetes,1IP02@117747|Sphingobacteriia	976|Bacteroidetes	G	Belongs to the xylose isomerase family	xylA	-	5.3.1.5	ko:K01805	ko00040,ko00051,ko01100,map00040,map00051,map01100	-	R00878,R01432	RC00376,RC00516	ko00000,ko00001,ko01000	-	-	-	-
BYD3_k127_6076280_124	688270.Celal_3320	1.027e-07	61.0	2CGGS@1|root,33IJT@2|Bacteria,4NZ82@976|Bacteroidetes,1I6NH@117743|Flavobacteriia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_6076280_67	1123248.KB893314_gene3671	4.974e-105	345.0	COG1011@1|root,COG1011@2|Bacteria,4NF0Y@976|Bacteroidetes,1IRE7@117747|Sphingobacteriia	976|Bacteroidetes	S	Haloacid dehalogenase-like hydrolase	-	-	-	ko:K07025	-	-	-	-	ko00000	-	-	-	HAD_2,Hydrolase
BYD3_k127_6076280_110	388413.ALPR1_03670	4.237e-40	153.0	COG2259@1|root,COG2259@2|Bacteria,4NSBJ@976|Bacteroidetes,47SCA@768503|Cytophagia	976|Bacteroidetes	S	DoxX	-	-	-	ko:K15977	-	-	-	-	ko00000	-	-	-	DoxX
BYD3_k127_6076280_15	1121904.ARBP01000006_gene3816	1.059e-272	870.0	COG1413@1|root,COG2133@1|root,COG1413@2|Bacteria,COG2133@2|Bacteria,4NHVG@976|Bacteroidetes,47M7T@768503|Cytophagia	976|Bacteroidetes	CG	TIGRFAM membrane-bound dehydrogenase domain protein	-	-	-	-	-	-	-	-	-	-	-	-	Cytochrom_C,GSDH,HEAT_2
BYD3_k127_6076280_24	1150600.ADIARSV_1358	4.022e-228	712.0	COG1271@1|root,COG1271@2|Bacteria,4NG7U@976|Bacteroidetes,1INY9@117747|Sphingobacteriia	976|Bacteroidetes	C	Cytochrome bd ubiquinol oxidase subunit I	cydA	-	1.10.3.14	ko:K00425	ko00190,ko01100,ko02020,map00190,map01100,map02020	M00153	R11325	RC00061	ko00000,ko00001,ko00002,ko01000	3.D.4.3	-	-	Cyt_bd_oxida_I
BYD3_k127_6076280_48	1121481.AUAS01000005_gene2095	5.316e-140	452.0	COG1294@1|root,COG1294@2|Bacteria,4NH9P@976|Bacteroidetes,47KEH@768503|Cytophagia	976|Bacteroidetes	C	Cytochrome bd terminal oxidase subunit II	cydB	-	1.10.3.14	ko:K00426	ko00190,ko01100,ko02020,map00190,map01100,map02020	M00153	R11325	RC00061	ko00000,ko00001,ko00002,ko01000	3.D.4.3	-	-	Cyt_bd_oxida_II
BYD3_k127_6076280_83	1237149.C900_03863	1.989e-85	288.0	COG3279@1|root,COG3279@2|Bacteria,4NIJQ@976|Bacteroidetes,47XE0@768503|Cytophagia	976|Bacteroidetes	K	LytTr DNA-binding domain	-	-	-	-	-	-	-	-	-	-	-	-	LytTR,Response_reg
BYD3_k127_6076280_72	1237149.C900_03864	8.681e-99	333.0	COG2972@1|root,COG2972@2|Bacteria,4NH1Q@976|Bacteroidetes,47PMI@768503|Cytophagia	976|Bacteroidetes	T	Histidine kinase	-	-	-	-	-	-	-	-	-	-	-	-	His_kinase
BYD3_k127_6076280_33	1237149.C900_01975	8.969e-213	674.0	COG0405@1|root,COG0405@2|Bacteria,4NF2H@976|Bacteroidetes,47KUQ@768503|Cytophagia	976|Bacteroidetes	E	PFAM Gamma-glutamyltranspeptidase	ggt	-	2.3.2.2,3.4.19.13	ko:K00681	ko00430,ko00460,ko00480,ko01100,map00430,map00460,map00480,map01100	-	R00494,R01262,R01687,R03867,R03916,R03970,R03971,R04935	RC00064,RC00090,RC00096	ko00000,ko00001,ko01000,ko01002	-	-	-	G_glu_transpept
BYD3_k127_6076280_92	1237149.C900_01977	4.944e-72	248.0	COG1309@1|root,COG1309@2|Bacteria	2|Bacteria	K	transcriptional regulator	-	-	-	-	-	-	-	-	-	-	-	-	TetR_N
BYD3_k127_6076280_97	903818.KI912268_gene852	8.731e-60	224.0	COG2834@1|root,COG4249@1|root,COG2834@2|Bacteria,COG4249@2|Bacteria	2|Bacteria	S	B-1 B cell differentiation	lolA	-	-	ko:K03634,ko:K14166	-	-	-	-	ko00000,ko02000	-	-	-	Cadherin,LolA,PPC,Peptidase_C14
BYD3_k127_6076280_123	1349785.BAUG01000032_gene1853	1.015e-07	64.0	COG0457@1|root,COG1729@1|root,COG0457@2|Bacteria,COG1729@2|Bacteria,4NE4W@976|Bacteroidetes,1HX2D@117743|Flavobacteriia	976|Bacteroidetes	K	tetratricopeptide repeat	-	-	-	-	-	-	-	-	-	-	-	-	TPR_16,TPR_2,TPR_21,TPR_6,TPR_8
BYD3_k127_6076280_100	313606.M23134_07170	7.382e-57	217.0	COG0457@1|root,COG4249@1|root,COG0457@2|Bacteria,COG4249@2|Bacteria,4NN66@976|Bacteroidetes,47Q5A@768503|Cytophagia	976|Bacteroidetes	S	Caspase domain	-	-	-	-	-	-	-	-	-	-	-	-	Peptidase_C14
BYD3_k127_6083835_0	1366050.N234_09795	4.426e-221	725.0	COG0419@1|root,COG0419@2|Bacteria,1REER@1224|Proteobacteria,2VY5A@28216|Betaproteobacteria,1KDNG@119060|Burkholderiaceae	28216|Betaproteobacteria	L	ATPase involved in DNA repair	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_6083835_1	102129.Lepto7375DRAFT_1471	1.139e-125	435.0	COG3540@1|root,COG3540@2|Bacteria,1G27Q@1117|Cyanobacteria,1H9KJ@1150|Oscillatoriales	1117|Cyanobacteria	P	PFAM PhoD-like phosphatase	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_6174522_44	926549.KI421517_gene4108	1.436e-79	267.0	COG2080@1|root,COG2080@2|Bacteria,4NM72@976|Bacteroidetes,47PGG@768503|Cytophagia	976|Bacteroidetes	C	Aerobic-type carbon monoxide dehydrogenase small subunit CoxS	-	-	1.3.99.16	ko:K07302	-	-	-	-	ko00000,ko01000	-	-	-	Fer2,Fer2_2
BYD3_k127_6174522_4	926549.KI421517_gene4109	0.0	1118.0	COG1529@1|root,COG1529@2|Bacteria,4NFFU@976|Bacteroidetes,47KVI@768503|Cytophagia	976|Bacteroidetes	C	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain	-	-	1.3.99.16	ko:K07303	-	-	-	-	ko00000,ko01000	-	-	-	Ald_Xan_dh_C2
BYD3_k127_6174522_43	471854.Dfer_1402	5.733e-85	290.0	COG0662@1|root,COG2207@1|root,COG0662@2|Bacteria,COG2207@2|Bacteria,4NJH3@976|Bacteroidetes,47UK1@768503|Cytophagia	976|Bacteroidetes	K	helix_turn_helix, arabinose operon control protein	-	-	-	-	-	-	-	-	-	-	-	-	Cupin_2,HTH_18
BYD3_k127_6174522_25	1121904.ARBP01000006_gene3917	2.155e-148	474.0	COG5285@1|root,COG5285@2|Bacteria,4NHQ6@976|Bacteroidetes,47NC5@768503|Cytophagia	976|Bacteroidetes	Q	Phytanoyl-CoA dioxygenase (PhyH)	-	-	-	-	-	-	-	-	-	-	-	-	PhyH
BYD3_k127_6174522_41	1408473.JHXO01000009_gene3462	4.415e-91	308.0	COG3394@1|root,COG3394@2|Bacteria,4PNAT@976|Bacteroidetes,2G14M@200643|Bacteroidia	976|Bacteroidetes	G	YdjC-like protein	-	-	3.5.1.105	ko:K03478	-	-	-	-	ko00000,ko01000	-	-	-	YdjC
BYD3_k127_6174522_30	485918.Cpin_3387	7.66e-130	424.0	COG2072@1|root,COG2072@2|Bacteria,4NGC0@976|Bacteroidetes,1IURW@117747|Sphingobacteriia	976|Bacteroidetes	C	Flavin-binding monooxygenase-like	-	-	-	-	-	-	-	-	-	-	-	-	Pyr_redox_3
BYD3_k127_6174522_31	1121904.ARBP01000004_gene812	4.203e-127	424.0	COG0642@1|root,COG2205@2|Bacteria,4NUBB@976|Bacteroidetes	976|Bacteroidetes	T	GHKL domain	-	-	-	-	-	-	-	-	-	-	-	-	HATPase_c,HisKA
BYD3_k127_6174522_40	945713.IALB_2695	6.957e-95	315.0	COG0745@1|root,COG0745@2|Bacteria	945713.IALB_2695|-	T	phosphorelay signal transduction system	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_6174522_27	1237149.C900_04349	8.45e-142	459.0	COG0457@1|root,COG0457@2|Bacteria,4PJN4@976|Bacteroidetes,47NZ0@768503|Cytophagia	976|Bacteroidetes	S	Tetratricopeptide repeat	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_6174522_20	1150600.ADIARSV_0179	9.267e-195	616.0	COG2211@1|root,COG2211@2|Bacteria,4NE3F@976|Bacteroidetes,1IPIA@117747|Sphingobacteriia	976|Bacteroidetes	G	Major Facilitator	-	-	-	ko:K16211	-	-	-	-	ko00000,ko02000	2.A.2.6	-	-	MFS_1,MFS_2
BYD3_k127_6174522_10	1237149.C900_04352	0.0	1011.0	COG1501@1|root,COG1501@2|Bacteria,4NE1H@976|Bacteroidetes,47NQ6@768503|Cytophagia	976|Bacteroidetes	G	Belongs to the glycosyl hydrolase 31 family	-	-	3.2.1.20	ko:K01187	ko00052,ko00500,ko01100,map00052,map00500,map01100	-	R00028,R00801,R00802,R06087,R06088	RC00028,RC00049,RC00077	ko00000,ko00001,ko01000	-	GH31	-	DUF4968,DUF5110,Gal_mutarotas_2,Glyco_hydro_31
BYD3_k127_6174522_29	1237149.C900_02568	1.554e-131	428.0	COG1609@1|root,COG1609@2|Bacteria,4NDW6@976|Bacteroidetes,47MGC@768503|Cytophagia	976|Bacteroidetes	K	PFAM Periplasmic binding protein LacI transcriptional regulator	cytR	-	-	ko:K02529,ko:K05499	-	-	-	-	ko00000,ko03000	-	-	-	LacI,Peripla_BP_1,Peripla_BP_3
BYD3_k127_6174522_8	927658.AJUM01000024_gene2516	0.0	1057.0	COG1629@1|root,COG4771@2|Bacteria,4P1Z5@976|Bacteroidetes,2FP9Q@200643|Bacteroidia,3XJEH@558415|Marinilabiliaceae	976|Bacteroidetes	P	TonB dependent receptor	susC	-	-	ko:K21573	-	-	-	-	ko00000,ko02000	1.B.14.6.1	-	-	CarbopepD_reg_2,Plug,TonB_dep_Rec
BYD3_k127_6174522_18	1191523.MROS_0760	5.526e-211	667.0	COG3637@1|root,COG3637@2|Bacteria	2|Bacteria	M	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety	-	-	-	ko:K21572	-	-	-	-	ko00000,ko02000	8.A.46.1,8.A.46.3	-	-	SusD-like_3,SusD_RagB
BYD3_k127_6174522_33	1237149.C900_01386	1.804e-125	416.0	28JY0@1|root,2Z9ND@2|Bacteria,4NIG7@976|Bacteroidetes,47N1W@768503|Cytophagia	976|Bacteroidetes	S	Outer membrane protein SusF_SusE	-	-	-	ko:K21571	-	-	-	-	ko00000	-	-	-	SusE,SusF_SusE
BYD3_k127_6174522_12	1237149.C900_01387	4.895e-304	959.0	COG0296@1|root,COG0296@2|Bacteria,4PKT8@976|Bacteroidetes,47JN0@768503|Cytophagia	976|Bacteroidetes	G	Belongs to the glycosyl hydrolase 13 family	treZ_2	-	-	-	-	-	-	-	-	-	-	-	Alpha-amylase,BACON,CBM_48
BYD3_k127_6174522_19	927658.AJUM01000024_gene2521	3.191e-202	647.0	COG0366@1|root,COG0366@2|Bacteria,4NEXF@976|Bacteroidetes,2FMHS@200643|Bacteroidia,3XINW@558415|Marinilabiliaceae	976|Bacteroidetes	G	Alpha-amylase domain	amyA2	GO:0003674,GO:0003824,GO:0004553,GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0016787,GO:0016798,GO:0031216,GO:0044464,GO:0071944	3.2.1.135	ko:K21575	-	-	-	-	ko00000,ko01000	-	GH13	-	Alpha-amylase,Cyc-maltodext_C,Cyc-maltodext_N
BYD3_k127_6174522_3	388413.ALPR1_19733	0.0	1161.0	COG4206@1|root,COG4206@2|Bacteria,4P258@976|Bacteroidetes,47Y44@768503|Cytophagia	976|Bacteroidetes	P	PFAM TonB-dependent Receptor Plug	-	-	-	-	-	-	-	-	-	-	-	-	CarbopepD_reg_2,Plug,TonB_dep_Rec
BYD3_k127_6174522_14	388413.ALPR1_19728	1.546e-236	741.0	COG0561@1|root,COG0561@2|Bacteria,4PMMP@976|Bacteroidetes	976|Bacteroidetes	S	Pfam:SusD	-	-	-	ko:K21572	-	-	-	-	ko00000,ko02000	8.A.46.1,8.A.46.3	-	-	SusD-like_3,SusD_RagB
BYD3_k127_6174522_1	760192.Halhy_1517	0.0	1238.0	COG4888@1|root,COG4888@2|Bacteria,4NEE8@976|Bacteroidetes,1IUUN@117747|Sphingobacteriia	976|Bacteroidetes	S	ASPIC and UnbV	-	-	-	-	-	-	-	-	-	-	-	-	UnbV_ASPIC,VCBS
BYD3_k127_6174522_0	760192.Halhy_1519	0.0	1423.0	COG4888@1|root,COG4888@2|Bacteria,4NEE8@976|Bacteroidetes,1IVZC@117747|Sphingobacteriia	976|Bacteroidetes	S	ASPIC and UnbV	-	-	-	-	-	-	-	-	-	-	-	-	FG-GAP,UnbV_ASPIC,VCBS
BYD3_k127_6174522_11	388413.ALPR1_19718	3.297e-319	1011.0	COG4888@1|root,COG4888@2|Bacteria,4NEE8@976|Bacteroidetes,47MGE@768503|Cytophagia	976|Bacteroidetes	S	ASPIC and UnbV	-	-	-	-	-	-	-	-	-	-	-	-	UnbV_ASPIC,VCBS
BYD3_k127_6174522_6	760192.Halhy_1519	0.0	1078.0	COG4888@1|root,COG4888@2|Bacteria,4NEE8@976|Bacteroidetes,1IVZC@117747|Sphingobacteriia	976|Bacteroidetes	S	ASPIC and UnbV	-	-	-	-	-	-	-	-	-	-	-	-	FG-GAP,UnbV_ASPIC,VCBS
BYD3_k127_6174522_7	1237149.C900_02562	0.0	1061.0	COG1554@1|root,COG1554@2|Bacteria,4NFG1@976|Bacteroidetes,47MTU@768503|Cytophagia	976|Bacteroidetes	G	Glycosyl hydrolase family 65, N-terminal domain	kojP	-	-	-	-	-	-	-	-	-	-	-	Glyco_hydro_65N,Glyco_hydro_65m
BYD3_k127_6174522_23	1123248.KB893318_gene4093	7.308e-184	585.0	COG0671@1|root,COG0671@2|Bacteria,4NF9W@976|Bacteroidetes,1IRBB@117747|Sphingobacteriia	976|Bacteroidetes	I	SPTR Phosphoesterase, PA-phosphatase related	-	-	-	-	-	-	-	-	-	-	-	-	PAP2
BYD3_k127_6174522_50	1120966.AUBU01000008_gene2530	9.195e-64	232.0	28I8D@1|root,32Q7B@2|Bacteria,4PBP6@976|Bacteroidetes,47W40@768503|Cytophagia	976|Bacteroidetes	S	Domain of unknown function (DUF4249)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4249
BYD3_k127_6174522_17	1120965.AUBV01000003_gene468	7.065e-215	692.0	COG1629@1|root,COG4771@2|Bacteria,4NF4B@976|Bacteroidetes	976|Bacteroidetes	P	TonB-dependent receptor	-	-	-	-	-	-	-	-	-	-	-	-	CarbopepD_reg_2,Plug,TonB_dep_Rec
BYD3_k127_6174522_38	1237149.C900_02557	5.569e-102	336.0	COG0580@1|root,COG0580@2|Bacteria,4NEFK@976|Bacteroidetes,47KUR@768503|Cytophagia	976|Bacteroidetes	G	Belongs to the MIP aquaporin (TC 1.A.8) family	glpF	-	-	ko:K02440	-	-	-	-	ko00000,ko02000	1.A.8.1,1.A.8.2	-	-	MIP
BYD3_k127_6174522_15	143224.JQMD01000002_gene2905	4.483e-233	730.0	COG0554@1|root,COG0554@2|Bacteria,4NFUH@976|Bacteroidetes,1HX3Z@117743|Flavobacteriia	976|Bacteroidetes	H	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate	glpK	-	2.7.1.30	ko:K00864	ko00561,ko01100,ko03320,ko04626,map00561,map01100,map03320,map04626	-	R00847	RC00002,RC00017	ko00000,ko00001,ko01000,ko04147	-	-	-	DAO,DAO_C,FGGY_C,FGGY_N
BYD3_k127_6174522_22	1249997.JHZW01000002_gene1308	2.707e-191	612.0	COG0578@1|root,COG0578@2|Bacteria,4PKIZ@976|Bacteroidetes,1IG4I@117743|Flavobacteriia,2PGIQ@252356|Maribacter	976|Bacteroidetes	C	C-terminal domain of alpha-glycerophosphate oxidase	glpD	-	1.1.5.3	ko:K00111	ko00564,ko01110,map00564,map01110	-	R00848	RC00029	ko00000,ko00001,ko01000	-	-	-	DAO,DAO_C
BYD3_k127_6174522_35	700598.Niako_6353	4.649e-120	393.0	COG1940@1|root,COG1940@2|Bacteria,4NGC1@976|Bacteroidetes,1IURS@117747|Sphingobacteriia	976|Bacteroidetes	GK	COGs COG1940 Transcriptional regulator sugar kinase	-	-	-	-	-	-	-	-	-	-	-	-	ROK
BYD3_k127_6174522_55	1123248.KB893359_gene2134	1.343e-47	174.0	COG0346@1|root,COG0346@2|Bacteria,4NRYI@976|Bacteroidetes,1IY77@117747|Sphingobacteriia	976|Bacteroidetes	E	lactoylglutathione lyase activity	-	-	-	-	-	-	-	-	-	-	-	-	Glyoxalase
BYD3_k127_6174522_34	313596.RB2501_14094	4.416e-122	400.0	COG0524@1|root,COG0524@2|Bacteria,4NJIK@976|Bacteroidetes,1I00V@117743|Flavobacteriia	976|Bacteroidetes	G	pfkB family carbohydrate kinase	-	-	2.7.1.20	ko:K00856	ko00230,ko01100,map00230,map01100	-	R00185	RC00002,RC00017	ko00000,ko00001,ko01000	-	-	-	PfkB
BYD3_k127_6174522_48	1304284.L21TH_0398	4.421e-69	241.0	COG0637@1|root,COG0637@2|Bacteria,1UZE0@1239|Firmicutes,24DWR@186801|Clostridia,36GZ2@31979|Clostridiaceae	186801|Clostridia	S	haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED	pgmB	-	5.4.2.6	ko:K01838	ko00500,map00500	-	R02728,R11310	RC00408	ko00000,ko00001,ko01000	-	-	-	HAD_2
BYD3_k127_6174522_9	468059.AUHA01000004_gene2204	0.0	1046.0	COG1554@1|root,COG1554@2|Bacteria,4NFG1@976|Bacteroidetes,1IRII@117747|Sphingobacteriia	976|Bacteroidetes	G	phosphorylase	-	-	2.4.1.8	ko:K00691	ko00500,ko01100,map00500,map01100	-	R01555	RC00049	ko00000,ko00001,ko01000	-	GH65	-	Glyco_hydro_65C,Glyco_hydro_65N,Glyco_hydro_65m
BYD3_k127_6174522_49	1168289.AJKI01000041_gene3331	6.389e-66	232.0	COG2755@1|root,COG2755@2|Bacteria,4NNIC@976|Bacteroidetes	976|Bacteroidetes	E	COG2755 Lysophospholipase L1 and related	-	-	-	-	-	-	-	-	-	-	-	-	Lipase_GDSL_2
BYD3_k127_6174522_21	487796.Flav2ADRAFT_0939	5.462e-194	612.0	COG0477@1|root,COG0477@2|Bacteria,4PN3S@976|Bacteroidetes	976|Bacteroidetes	EGP	Major Facilitator Superfamily	-	-	-	-	-	-	-	-	-	-	-	-	MFS_1
BYD3_k127_6174522_36	471854.Dfer_0335	5.411e-113	371.0	COG2321@1|root,COG2321@2|Bacteria,4NDTZ@976|Bacteroidetes,47KPT@768503|Cytophagia	976|Bacteroidetes	S	Putative neutral zinc metallopeptidase	ypfJ	-	-	ko:K07054	-	-	-	-	ko00000	-	-	-	Zn_peptidase
BYD3_k127_6174522_46	1237149.C900_03407	3.008e-73	256.0	COG0457@1|root,COG0457@2|Bacteria,4P246@976|Bacteroidetes,47PGN@768503|Cytophagia	976|Bacteroidetes	S	Protein of unknown function (DUF2911)	-	-	-	-	-	-	-	-	-	-	-	-	DUF2911
BYD3_k127_6174522_51	313606.M23134_02099	8.037e-63	221.0	COG2094@1|root,COG2094@2|Bacteria,4NP22@976|Bacteroidetes,47JIZ@768503|Cytophagia	976|Bacteroidetes	L	Belongs to the DNA glycosylase MPG family	mpg	-	3.2.2.21	ko:K03652	ko03410,map03410	-	-	-	ko00000,ko00001,ko01000,ko03400	-	-	-	Pur_DNA_glyco
BYD3_k127_6174522_26	1237149.C900_03404	3.778e-144	474.0	COG2885@1|root,COG2885@2|Bacteria,4NEND@976|Bacteroidetes,47MW3@768503|Cytophagia	976|Bacteroidetes	M	Belongs to the ompA family	-	-	-	-	-	-	-	-	-	-	-	-	CarboxypepD_reg,OmpA,PD40,RicinB_lectin_2
BYD3_k127_6174522_24	926549.KI421517_gene1091	6.525e-170	541.0	COG2730@1|root,COG2730@2|Bacteria,4NIBG@976|Bacteroidetes,47P3X@768503|Cytophagia	976|Bacteroidetes	G	Cellulase (glycosyl hydrolase family 5)	-	-	3.2.1.4	ko:K01179	ko00500,ko01100,map00500,map01100	-	R06200,R11307,R11308	-	ko00000,ko00001,ko01000	-	GH5,GH9	-	CBM_6,Cellulase
BYD3_k127_6174522_16	880070.Cycma_2899	9.204e-222	707.0	COG0613@1|root,COG0613@2|Bacteria,4NXQH@976|Bacteroidetes,47U5Z@768503|Cytophagia	976|Bacteroidetes	S	PHP domain protein	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_6174522_52	1267533.KB906740_gene376	5.812e-58	208.0	COG2318@1|root,COG2318@2|Bacteria	2|Bacteria	S	DinB family	-	-	-	-	-	-	-	-	-	-	-	-	DUF664
BYD3_k127_6174522_57	545697.HMPREF0216_00558	2.148e-42	160.0	COG2080@1|root,COG2080@2|Bacteria,1V6HE@1239|Firmicutes,24J9B@186801|Clostridia,36K17@31979|Clostridiaceae	186801|Clostridia	C	[2Fe-2S] binding domain	-	-	1.17.1.5,1.2.5.3	ko:K03518,ko:K20446	ko00760,ko01120,map00760,map01120	-	R01720,R11168	RC00589,RC02800	ko00000,ko00001,ko01000	-	-	-	Fer2,Fer2_2
BYD3_k127_6174522_13	1288963.ADIS_2371	4.253e-252	796.0	COG1529@1|root,COG1529@2|Bacteria,4NFFU@976|Bacteroidetes,47XI5@768503|Cytophagia	976|Bacteroidetes	C	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain	-	-	-	-	-	-	-	-	-	-	-	-	Ald_Xan_dh_C,Ald_Xan_dh_C2
BYD3_k127_6174522_42	1185876.BN8_05130	8.744e-88	299.0	COG1082@1|root,COG1082@2|Bacteria,4NFMD@976|Bacteroidetes,47NNJ@768503|Cytophagia	976|Bacteroidetes	G	Xylose isomerase-like TIM barrel	-	-	-	-	-	-	-	-	-	-	-	-	AP_endonuc_2
BYD3_k127_6174522_5	1121875.KB907550_gene790	0.0	1108.0	COG2010@1|root,COG2133@1|root,COG2010@2|Bacteria,COG2133@2|Bacteria,4NEZ5@976|Bacteroidetes,1HX7C@117743|Flavobacteriia	976|Bacteroidetes	C	PFAM Cytochrome C	-	-	-	-	-	-	-	-	-	-	-	-	Cytochrom_C,Cytochrome_CBB3,F5_F8_type_C,HEAT_2
BYD3_k127_6174522_32	504472.Slin_1351	2.153e-126	410.0	COG2382@1|root,COG2382@2|Bacteria,4NK15@976|Bacteroidetes,47MMH@768503|Cytophagia	976|Bacteroidetes	P	Putative esterase	-	-	-	ko:K07214	-	-	-	-	ko00000	-	-	-	Esterase,SGL
BYD3_k127_6174522_61	1123276.KB893245_gene1426	5.466e-27	117.0	COG2353@1|root,COG2353@2|Bacteria,4NT3W@976|Bacteroidetes,47R2B@768503|Cytophagia	976|Bacteroidetes	S	Belongs to the UPF0312 family	-	-	-	-	-	-	-	-	-	-	-	-	YceI
BYD3_k127_6174522_28	1123276.KB893245_gene1427	3.535e-133	442.0	COG1858@1|root,COG1858@2|Bacteria	2|Bacteria	C	electron transfer activity	-	-	-	-	-	-	-	-	-	-	-	-	DHOR
BYD3_k127_6174522_62	696281.Desru_3829	6.938e-06	57.0	COG2909@1|root,COG2909@2|Bacteria,1VND4@1239|Firmicutes,25GPJ@186801|Clostridia	186801|Clostridia	K	helix_turn_helix, Lux Regulon	-	-	-	-	-	-	-	-	-	-	-	-	GerE
BYD3_k127_6174522_60	530564.Psta_3107	2.33e-32	133.0	COG0346@1|root,COG0346@2|Bacteria,2J15N@203682|Planctomycetes	203682|Planctomycetes	E	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily	-	-	-	-	-	-	-	-	-	-	-	-	Glyoxalase
BYD3_k127_6174522_47	1461577.CCMH01000023_gene2339	2.788e-71	249.0	COG2207@1|root,COG2207@2|Bacteria,4NJQD@976|Bacteroidetes,1HXC9@117743|Flavobacteriia	976|Bacteroidetes	K	Helix-turn-helix domain	-	-	-	-	-	-	-	-	-	-	-	-	HTH_18
BYD3_k127_6174522_58	1189612.A33Q_1477	4.181e-41	168.0	COG2207@1|root,COG2207@2|Bacteria,4NIJV@976|Bacteroidetes,47XFM@768503|Cytophagia	976|Bacteroidetes	K	helix_turn_helix, arabinose operon control protein	-	-	-	-	-	-	-	-	-	-	-	-	HTH_18
BYD3_k127_6174522_37	694427.Palpr_2728	2.252e-108	366.0	COG1538@1|root,COG1538@2|Bacteria,4NF4X@976|Bacteroidetes,2FM4A@200643|Bacteroidia,22YBS@171551|Porphyromonadaceae	976|Bacteroidetes	MU	Outer membrane efflux protein	-	-	-	-	-	-	-	-	-	-	-	-	OEP
BYD3_k127_6174522_39	694427.Palpr_2727	8.353e-96	325.0	COG0845@1|root,COG0845@2|Bacteria,4NF23@976|Bacteroidetes,2FUQH@200643|Bacteroidia,22YMF@171551|Porphyromonadaceae	976|Bacteroidetes	M	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family	-	-	-	-	-	-	-	-	-	-	-	-	HlyD_D23
BYD3_k127_6174522_2	694427.Palpr_2726	0.0	1204.0	COG0841@1|root,COG0841@2|Bacteria,4NDZG@976|Bacteroidetes,2FM3B@200643|Bacteroidia,22VY6@171551|Porphyromonadaceae	976|Bacteroidetes	V	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family	-	-	-	ko:K03296	-	-	-	-	ko00000	2.A.6.2	-	-	ACR_tran
BYD3_k127_6174522_54	1121904.ARBP01000005_gene4621	1.546e-53	206.0	COG1680@1|root,COG1680@2|Bacteria,4NEVS@976|Bacteroidetes,47PSS@768503|Cytophagia	976|Bacteroidetes	V	Beta-lactamase	-	-	-	-	-	-	-	-	-	-	-	-	Beta-lactamase
BYD3_k127_6174522_56	1443665.JACA01000044_gene4594	8.895e-43	171.0	COG2114@1|root,COG2114@2|Bacteria,4NKWT@976|Bacteroidetes,1I3C4@117743|Flavobacteriia,2YJ9C@290174|Aquimarina	976|Bacteroidetes	T	Protein of unknown function (DUF2652)	-	-	-	-	-	-	-	-	-	-	-	-	DUF2652
BYD3_k127_6174522_59	1304874.JAFY01000002_gene834	8.057e-38	147.0	COG1720@1|root,COG1720@2|Bacteria,3TBKI@508458|Synergistetes	508458|Synergistetes	S	Uncharacterised protein family UPF0066	-	-	-	-	-	-	-	-	-	-	-	-	UPF0066
BYD3_k127_6174522_45	215803.DB30_5113	2.125e-76	272.0	COG0793@1|root,COG0793@2|Bacteria,1RGID@1224|Proteobacteria,4382G@68525|delta/epsilon subdivisions,2X3CI@28221|Deltaproteobacteria,2YVET@29|Myxococcales	28221|Deltaproteobacteria	M	tail specific protease	-	-	-	-	-	-	-	-	-	-	-	-	Peptidase_S41
BYD3_k127_6180643_1	929556.Solca_2656	7.42e-79	269.0	COG1595@1|root,COG1595@2|Bacteria,4NEHC@976|Bacteroidetes,1ITMJ@117747|Sphingobacteriia	976|Bacteroidetes	K	Sigma-70, region 4	-	-	-	ko:K03088	-	-	-	-	ko00000,ko03021	-	-	-	Sigma70_r2,Sigma70_r4_2
BYD3_k127_6180643_0	1123248.KB893328_gene913	4.393e-182	578.0	COG1858@1|root,COG1858@2|Bacteria,4NJ4X@976|Bacteroidetes	976|Bacteroidetes	P	cytochrome C peroxidase	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_6181648_3	1123248.KB893328_gene913	5.403e-21	92.0	COG1858@1|root,COG1858@2|Bacteria,4NJ4X@976|Bacteroidetes	976|Bacteroidetes	P	cytochrome C peroxidase	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_6181648_1	760192.Halhy_4420	2.494e-159	514.0	COG2311@1|root,COG2311@2|Bacteria,4NG01@976|Bacteroidetes	976|Bacteroidetes	S	membrane	-	-	-	ko:K07148	-	-	-	-	ko00000	-	-	-	DUF418
BYD3_k127_6181648_2	929713.NIASO_15810	1.644e-135	443.0	COG1680@1|root,COG1680@2|Bacteria,4NGZR@976|Bacteroidetes,1ISPB@117747|Sphingobacteriia	976|Bacteroidetes	V	COGs COG1680 Beta-lactamase class C and other penicillin binding protein	-	-	-	-	-	-	-	-	-	-	-	-	Beta-lactamase
BYD3_k127_6181648_0	700598.Niako_3098	2.017e-178	566.0	COG3214@1|root,COG3214@2|Bacteria,4NF6V@976|Bacteroidetes,1IW75@117747|Sphingobacteriia	976|Bacteroidetes	S	Winged helix DNA-binding domain	-	-	-	ko:K09927	-	-	-	-	ko00000	-	-	-	HTH_42
BYD3_k127_6185309_15	1121904.ARBP01000001_gene5684	6.071e-234	754.0	COG4993@1|root,COG4993@2|Bacteria,4NFK0@976|Bacteroidetes,47KDI@768503|Cytophagia	976|Bacteroidetes	G	Pyrrolo-quinoline quinone	-	-	1.1.5.2	ko:K00117	ko00030,ko01100,ko01110,ko01130,map00030,map01100,map01110,map01130	-	R06620	RC00066	ko00000,ko00001,ko01000	-	-	-	Cytochrome_CBB3,PQQ
BYD3_k127_6185309_25	760192.Halhy_0098	4.925e-109	360.0	COG1413@1|root,COG2010@1|root,COG2133@1|root,COG1413@2|Bacteria,COG2010@2|Bacteria,COG2133@2|Bacteria,4NHMI@976|Bacteroidetes	976|Bacteroidetes	CG	Membrane-bound dehydrogenase domain protein	-	-	-	-	-	-	-	-	-	-	-	-	Cytochrom_C,HEAT_2,PmoA
BYD3_k127_6185309_10	1123276.KB893313_gene3820	1.235e-319	997.0	COG4244@1|root,COG4244@2|Bacteria,4NG6K@976|Bacteroidetes,47K0Y@768503|Cytophagia	976|Bacteroidetes	G	Protein of unknown function (DUF1549)	-	-	-	-	-	-	-	-	-	-	-	-	PSCyt1,PSCyt2,PSD1
BYD3_k127_6185309_14	504472.Slin_0958	5.416e-269	833.0	COG3119@1|root,COG3119@2|Bacteria,4NGYE@976|Bacteroidetes,47MMC@768503|Cytophagia	976|Bacteroidetes	P	Protein of unknown function (DUF1501)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1501
BYD3_k127_6185309_47	1185876.BN8_04395	1.149e-16	91.0	2AB14@1|root,310ER@2|Bacteria,4NNNB@976|Bacteroidetes,47Q4B@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_6185309_48	1121011.AUCB01000020_gene3622	5.646e-09	64.0	COG0457@1|root,COG0457@2|Bacteria,4NP60@976|Bacteroidetes,1I5Q6@117743|Flavobacteriia	976|Bacteroidetes	S	Tetratricopeptide repeat	-	-	-	-	-	-	-	-	-	-	-	-	DUF4071
BYD3_k127_6185309_45	1279009.ADICEAN_00721	2.128e-35	158.0	COG4932@1|root,COG4932@2|Bacteria,4NK3C@976|Bacteroidetes	976|Bacteroidetes	M	domain protein	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_6185309_3	468059.AUHA01000003_gene1835	0.0	1161.0	COG1404@1|root,COG1404@2|Bacteria,4NHSQ@976|Bacteroidetes,1IWJ1@117747|Sphingobacteriia	976|Bacteroidetes	O	Subtilase family	-	-	-	-	-	-	-	-	-	-	-	-	Peptidase_S8
BYD3_k127_6185309_18	468059.AUHA01000003_gene1834	5.833e-175	569.0	COG0457@1|root,COG2114@1|root,COG0457@2|Bacteria,COG2114@2|Bacteria,4NEVN@976|Bacteroidetes,1IS6A@117747|Sphingobacteriia	976|Bacteroidetes	T	PFAM Adenylate and Guanylate cyclase catalytic domain	-	-	-	-	-	-	-	-	-	-	-	-	Guanylate_cyc,Response_reg,TPR_12,TPR_8
BYD3_k127_6185309_42	421531.IX38_19820	2.082e-47	196.0	COG1418@1|root,COG1418@2|Bacteria,4NFAG@976|Bacteroidetes,1I40V@117743|Flavobacteriia,3ZUAY@59732|Chryseobacterium	976|Bacteroidetes	S	Metal dependent phosphohydrolases with conserved 'HD' motif.	-	-	-	-	-	-	-	-	-	-	-	-	Guanylate_cyc,HD
BYD3_k127_6185309_35	865937.Gilli_2304	3.639e-64	249.0	COG0457@1|root,COG2207@1|root,COG5616@1|root,COG0457@2|Bacteria,COG2207@2|Bacteria,COG5616@2|Bacteria,4NFW7@976|Bacteroidetes,1HZQR@117743|Flavobacteriia	976|Bacteroidetes	K	COGs COG5616 integral membrane protein	-	-	-	-	-	-	-	-	-	-	-	-	HTH_18,TPR_8
BYD3_k127_6185309_21	240016.ABIZ01000001_gene2354	3.861e-140	465.0	COG0664@1|root,COG2066@1|root,COG0664@2|Bacteria,COG2066@2|Bacteria,46USD@74201|Verrucomicrobia,2ITM7@203494|Verrucomicrobiae	203494|Verrucomicrobiae	ET	Glutaminase	-	-	-	-	-	-	-	-	-	-	-	-	Glutaminase,cNMP_binding
BYD3_k127_6185309_41	700598.Niako_3962	7.444e-50	182.0	COG0745@1|root,COG0745@2|Bacteria,4NPID@976|Bacteroidetes	976|Bacteroidetes	KT	regulator	-	-	-	-	-	-	-	-	-	-	-	-	Response_reg
BYD3_k127_6185309_23	1270193.JARP01000001_gene2273	2.563e-131	428.0	COG2114@1|root,COG2114@2|Bacteria,4NG5A@976|Bacteroidetes,1HYY0@117743|Flavobacteriia,2NX4T@237|Flavobacterium	976|Bacteroidetes	T	Adenylate and Guanylate cyclase catalytic domain	-	-	4.6.1.1	ko:K01768	ko00230,ko02025,ko04113,ko04213,map00230,map02025,map04113,map04213	M00695	R00089,R00434	RC00295	ko00000,ko00001,ko00002,ko01000	-	-	-	Guanylate_cyc
BYD3_k127_6185309_7	1123057.P872_23520	0.0	1007.0	COG0823@1|root,COG1506@1|root,COG0823@2|Bacteria,COG1506@2|Bacteria,4NETS@976|Bacteroidetes,47KF8@768503|Cytophagia	976|Bacteroidetes	EU	Dipeptidyl peptidase IV (DPP IV) N-terminal region	-	-	3.4.14.5	ko:K01278	ko04974,map04974	-	-	-	ko00000,ko00001,ko01000,ko01002,ko04090,ko04147	-	-	-	DPPIV_N,Peptidase_S9
BYD3_k127_6185309_33	269798.CHU_2012	2.603e-76	276.0	COG0457@1|root,COG0457@2|Bacteria,4NIEU@976|Bacteroidetes,47XPU@768503|Cytophagia	976|Bacteroidetes	S	Tetratricopeptide repeat	-	-	-	-	-	-	-	-	-	-	-	-	TPR_16,TPR_19,TPR_2,TPR_8
BYD3_k127_6185309_34	929556.Solca_3742	1.601e-74	260.0	COG0226@1|root,COG0226@2|Bacteria,4NH1N@976|Bacteroidetes,1IRT8@117747|Sphingobacteriia	976|Bacteroidetes	P	ABC-type phosphate transport system periplasmic	-	-	-	ko:K02040	ko02010,ko02020,ko05152,map02010,map02020,map05152	M00222	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.7	-	-	PBP_like_2
BYD3_k127_6185309_39	929556.Solca_3744	3.348e-53	197.0	COG0810@1|root,COG0810@2|Bacteria,4NFH6@976|Bacteroidetes,1ISCX@117747|Sphingobacteriia	976|Bacteroidetes	U	Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins	tonB2	-	-	ko:K03832	-	-	-	-	ko00000,ko02000	2.C.1.1	-	-	TonB_C
BYD3_k127_6185309_40	1227739.Hsw_0356	3.925e-50	183.0	COG0848@1|root,COG0848@2|Bacteria,4NMQ8@976|Bacteroidetes,47Q1Y@768503|Cytophagia	976|Bacteroidetes	U	PFAM Biopolymer transport protein ExbD TolR	exbD2	-	-	-	-	-	-	-	-	-	-	-	ExbD
BYD3_k127_6185309_36	926549.KI421517_gene377	2.355e-61	217.0	COG0848@1|root,COG0848@2|Bacteria,4NMT4@976|Bacteroidetes,47NTX@768503|Cytophagia	976|Bacteroidetes	U	PFAM Biopolymer transport protein ExbD TolR	exbD1	-	-	-	-	-	-	-	-	-	-	-	ExbD
BYD3_k127_6185309_30	153721.MYP_4035	2.388e-96	322.0	COG0811@1|root,COG0811@2|Bacteria,4NE8M@976|Bacteroidetes,47MMA@768503|Cytophagia	976|Bacteroidetes	U	MotA TolQ ExbB proton channel	exbB	-	-	ko:K03561	-	-	-	-	ko00000,ko02000	1.A.30.2.1	-	-	MotA_ExbB
BYD3_k127_6185309_44	1340493.JNIF01000003_gene2976	1.126e-37	153.0	COG0596@1|root,COG2976@1|root,COG0596@2|Bacteria,COG2976@2|Bacteria	2|Bacteria	CO	Protein conserved in bacteria	-	-	-	-	-	-	-	-	-	-	-	-	Abhydrolase_1,Beta-lactamase,TPR_2,TPR_21,TPR_8
BYD3_k127_6185309_43	700598.Niako_2620	6.176e-39	152.0	COG1595@1|root,COG1595@2|Bacteria,4NSXH@976|Bacteroidetes,1ITK2@117747|Sphingobacteriia	976|Bacteroidetes	K	PFAM RNA polymerase sigma factor 70, region 4 type 2	-	-	-	ko:K03088	-	-	-	-	ko00000,ko03021	-	-	-	Sigma70_r2,Sigma70_r4_2
BYD3_k127_6185309_38	1123277.KB893176_gene3718	9.557e-59	217.0	COG3712@1|root,COG3712@2|Bacteria,4NSEH@976|Bacteroidetes,47RNC@768503|Cytophagia	976|Bacteroidetes	PT	Domain of unknown function (DUF4974)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4974,FecR
BYD3_k127_6185309_1	1121904.ARBP01000008_gene3411	0.0	1693.0	COG1629@1|root,COG1629@2|Bacteria,4NDXS@976|Bacteroidetes,47NEI@768503|Cytophagia	976|Bacteroidetes	P	TonB dependent receptor	-	-	-	-	-	-	-	-	-	-	-	-	CarbopepD_reg_2,Plug,TonB_dep_Rec
BYD3_k127_6185309_8	1121904.ARBP01000008_gene3412	5.34e-322	992.0	COG0457@1|root,COG0457@2|Bacteria,4NDX0@976|Bacteroidetes,47MNP@768503|Cytophagia	976|Bacteroidetes	S	SusD family	-	-	-	ko:K21572	-	-	-	-	ko00000,ko02000	8.A.46.1,8.A.46.3	-	-	SusD-like_3,SusD_RagB
BYD3_k127_6185309_13	1288963.ADIS_0164	1.765e-270	845.0	COG4225@1|root,COG4225@2|Bacteria,4NF1N@976|Bacteroidetes,47K76@768503|Cytophagia	976|Bacteroidetes	S	Heparinase II/III-like protein	-	-	-	-	-	-	-	-	-	-	-	-	DUF4962,Hepar_II_III
BYD3_k127_6185309_6	1185876.BN8_00464	0.0	1010.0	COG4225@1|root,COG4225@2|Bacteria,4NG6C@976|Bacteroidetes,47J9H@768503|Cytophagia	976|Bacteroidetes	S	Heparinase II/III-like protein	-	-	-	-	-	-	-	-	-	-	-	-	Hepar_II_III
BYD3_k127_6185309_27	760192.Halhy_5732	2.454e-101	335.0	COG0666@1|root,COG0666@2|Bacteria,4NJN4@976|Bacteroidetes,1IRR6@117747|Sphingobacteriia	976|Bacteroidetes	S	ankyrin repeats	-	-	-	-	-	-	-	-	-	-	-	-	Ank
BYD3_k127_6185309_0	1185876.BN8_01964	0.0	1904.0	COG1413@1|root,COG2010@1|root,COG2133@1|root,COG1413@2|Bacteria,COG2010@2|Bacteria,COG2133@2|Bacteria,4NHMI@976|Bacteroidetes,47K6B@768503|Cytophagia	976|Bacteroidetes	CG	Membrane-bound dehydrogenase domain protein	-	-	-	-	-	-	-	-	-	-	-	-	Cytochrom_C,HEAT_2,PmoA
BYD3_k127_6185309_31	504487.JCM19302_927	1.031e-90	308.0	COG2335@1|root,COG2335@2|Bacteria,4NH49@976|Bacteroidetes,1HXZS@117743|Flavobacteriia	976|Bacteroidetes	M	Secreted and surface protein containing fasciclin-like repeats	-	-	-	-	-	-	-	-	-	-	-	-	Fasciclin
BYD3_k127_6185309_16	1123277.KB893173_gene1625	2.093e-217	692.0	COG3158@1|root,COG3158@2|Bacteria,4NET9@976|Bacteroidetes,47K58@768503|Cytophagia	976|Bacteroidetes	P	Transport of potassium into the cell	kup	-	-	ko:K03549	-	-	-	-	ko00000,ko02000	2.A.72	-	-	K_trans
BYD3_k127_6185309_29	1392490.JHZX01000001_gene3537	1.368e-96	321.0	COG0745@1|root,COG0745@2|Bacteria,4NIQC@976|Bacteroidetes,1HZUW@117743|Flavobacteriia	976|Bacteroidetes	T	COGs COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain	-	-	-	ko:K07667	ko02020,ko02024,map02020,map02024	M00454	-	-	ko00000,ko00001,ko00002,ko02022	-	-	-	Response_reg,Trans_reg_C
BYD3_k127_6185309_26	1121012.AUKX01000070_gene1855	1.528e-104	350.0	COG0642@1|root,COG2205@2|Bacteria,4NFYN@976|Bacteroidetes,1HZ6X@117743|Flavobacteriia,23I0R@178469|Arenibacter	976|Bacteroidetes	T	Domain of unknown function (DUF4118)	-	-	2.7.13.3	ko:K07646	ko02020,map02020	M00454	-	-	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	-	-	-	DUF4118,HATPase_c,HisKA
BYD3_k127_6185309_28	1517682.HW49_08135	1.347e-100	333.0	COG1277@1|root,COG1277@2|Bacteria,4NN1K@976|Bacteroidetes,2FWQ2@200643|Bacteroidia,22ZHQ@171551|Porphyromonadaceae	976|Bacteroidetes	S	ABC-2 family transporter protein	-	-	-	-	-	-	-	-	-	-	-	-	ABC2_membrane_4
BYD3_k127_6185309_24	36874.HQ34_02295	7.036e-118	385.0	COG1131@1|root,COG1131@2|Bacteria,4NFNM@976|Bacteroidetes,2FRW8@200643|Bacteroidia,22Z6Z@171551|Porphyromonadaceae	976|Bacteroidetes	V	AAA domain, putative AbiEii toxin, Type IV TA system	bcrA	-	-	ko:K01990	-	M00254	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	ABC_tran
BYD3_k127_6185309_32	468059.AUHA01000007_gene2686	1.353e-80	279.0	COG0530@1|root,COG0530@2|Bacteria,4NTHP@976|Bacteroidetes,1IZN2@117747|Sphingobacteriia	976|Bacteroidetes	P	Sodium/calcium exchanger protein	-	-	-	ko:K07301	-	-	-	-	ko00000,ko02000	2.A.19.5	-	-	Na_Ca_ex
BYD3_k127_6185309_19	1123277.KB893200_gene6390	7.479e-171	544.0	2DB8U@1|root,2Z7SW@2|Bacteria,4NEUK@976|Bacteroidetes,47NX9@768503|Cytophagia	976|Bacteroidetes	S	Alginate lyase	-	-	-	-	-	-	-	-	-	-	-	-	Alginate_lyase
BYD3_k127_6185309_17	1268240.ATFI01000001_gene3599	1.221e-203	652.0	COG1082@1|root,COG1082@2|Bacteria,4PKHK@976|Bacteroidetes,2FQRD@200643|Bacteroidia,4ATS9@815|Bacteroidaceae	976|Bacteroidetes	G	Glycosyl-hydrolase 97 C-terminal, oligomerisation	-	-	-	-	-	-	-	-	-	-	-	-	GH97_C,GH97_N,Glyco_hydro_97
BYD3_k127_6185309_4	743722.Sph21_2865	0.0	1143.0	COG1554@1|root,COG1554@2|Bacteria,4NEWW@976|Bacteroidetes,1INRU@117747|Sphingobacteriia	976|Bacteroidetes	G	Glycosyl hydrolase family 65, N-terminal domain	-	-	3.2.1.51	ko:K15923	ko00511,map00511	-	-	-	ko00000,ko00001,ko01000	-	GH95	-	Glyco_hyd_65N_2
BYD3_k127_6185309_11	1122605.KB893648_gene3691	2.013e-318	995.0	COG1554@1|root,COG1554@2|Bacteria,4NKKJ@976|Bacteroidetes,1IV2Y@117747|Sphingobacteriia	976|Bacteroidetes	G	Glycosyl hydrolase family 65, N-terminal domain	-	-	-	-	-	-	-	-	-	-	-	-	Glyco_hyd_65N_2
BYD3_k127_6185309_5	714943.Mucpa_0230	0.0	1137.0	COG3250@1|root,COG3250@2|Bacteria,4NEDF@976|Bacteroidetes,1IP61@117747|Sphingobacteriia	976|Bacteroidetes	G	family 2, TIM barrel	lacZ_2	-	3.2.1.23	ko:K01190	ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100	-	R01105,R01678,R03355,R04783,R06114	RC00049,RC00452	ko00000,ko00001,ko01000	-	-	-	DUF4982,Glyco_hydro_2,Glyco_hydro_2_C,Glyco_hydro_2_N
BYD3_k127_6185309_22	1121904.ARBP01000003_gene6304	2.645e-138	456.0	COG4636@1|root,COG4636@2|Bacteria,4NFKR@976|Bacteroidetes,47K44@768503|Cytophagia	976|Bacteroidetes	S	Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella	-	-	-	-	-	-	-	-	-	-	-	-	VCBS
BYD3_k127_6185309_20	1168289.AJKI01000004_gene2963	2.77e-156	511.0	COG0561@1|root,COG0561@2|Bacteria,4PMH7@976|Bacteroidetes	976|Bacteroidetes	S	SusD family	-	-	-	ko:K21572	-	-	-	-	ko00000,ko02000	8.A.46.1,8.A.46.3	-	-	SusD-like_3,SusD_RagB
BYD3_k127_6185309_9	1168289.AJKI01000004_gene2962	3.41e-320	1010.0	COG1629@1|root,COG1629@2|Bacteria,4NDXS@976|Bacteroidetes,2FKYX@200643|Bacteroidia,3XM0Y@558415|Marinilabiliaceae	976|Bacteroidetes	P	Carboxypeptidase regulatory-like domain	-	-	-	-	-	-	-	-	-	-	-	-	CarbopepD_reg_2,Plug,STN,TonB_dep_Rec
BYD3_k127_6185309_2	1166018.FAES_3037	0.0	1193.0	COG0642@1|root,COG0745@1|root,COG2207@1|root,COG3292@1|root,COG0745@2|Bacteria,COG2205@2|Bacteria,COG2207@2|Bacteria,COG3292@2|Bacteria,4NDXU@976|Bacteroidetes,47JBS@768503|Cytophagia	976|Bacteroidetes	T	Two component regulator propeller	-	-	-	-	-	-	-	-	-	-	-	-	HATPase_c,HTH_18,HisKA,Reg_prop,Response_reg,Y_Y_Y
BYD3_k127_6185309_46	471854.Dfer_1451	2.472e-35	138.0	COG1695@1|root,COG1695@2|Bacteria,4NQJP@976|Bacteroidetes,47QZJ@768503|Cytophagia	976|Bacteroidetes	K	Transcriptional regulator PadR-like family	-	-	-	-	-	-	-	-	-	-	-	-	PadR
BYD3_k127_6185309_12	1123277.KB893201_gene6422	1.178e-284	900.0	COG0577@1|root,COG0577@2|Bacteria,4NDUK@976|Bacteroidetes,47JJN@768503|Cytophagia	976|Bacteroidetes	V	FtsX-like permease family	-	-	-	-	-	-	-	-	-	-	-	-	FtsX,MacB_PCD
BYD3_k127_6185309_37	1123277.KB893177_gene3609	4.584e-60	214.0	COG3403@1|root,COG3403@2|Bacteria,4PNZ7@976|Bacteroidetes,47YRG@768503|Cytophagia	976|Bacteroidetes	S	YqcI/YcgG family	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_6185309_49	1356852.N008_15950	0.0001651	44.0	COG0385@1|root,COG0385@2|Bacteria,4NEDA@976|Bacteroidetes,47K7V@768503|Cytophagia	976|Bacteroidetes	S	SBF-like CPA transporter family (DUF4137)	-	-	-	ko:K14347	-	-	-	-	ko00000,ko02000,ko04147	2.A.93.1	-	-	SBF_like
BYD3_k127_6188162_17	1123248.KB893325_gene1167	8.937e-96	322.0	COG1609@1|root,COG1609@2|Bacteria,4NDW6@976|Bacteroidetes,1IREC@117747|Sphingobacteriia	976|Bacteroidetes	K	helix_turn _helix lactose operon repressor	-	-	-	ko:K02529	-	-	-	-	ko00000,ko03000	-	-	-	LacI,Peripla_BP_1,Peripla_BP_3
BYD3_k127_6188162_12	700598.Niako_7289	3.636e-159	504.0	KOG1573@1|root,2Z822@2|Bacteria,4NFQF@976|Bacteroidetes,1IPN5@117747|Sphingobacteriia	976|Bacteroidetes	S	Inositol oxygenase	-	-	1.13.99.1	ko:K00469	ko00053,ko00562,map00053,map00562	-	R01184	RC00465	ko00000,ko00001,ko01000	-	-	-	MIOX
BYD3_k127_6188162_2	929713.NIASO_01600	6.331e-258	803.0	COG4146@1|root,COG4146@2|Bacteria,4NE9S@976|Bacteroidetes,1IPDT@117747|Sphingobacteriia	976|Bacteroidetes	S	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family	-	-	-	ko:K03307	-	-	-	-	ko00000	2.A.21	-	-	SSF
BYD3_k127_6188162_32	1123278.KB893493_gene5832	5.943e-19	91.0	COG0745@1|root,COG0745@2|Bacteria,4PPG5@976|Bacteroidetes,47YMS@768503|Cytophagia	976|Bacteroidetes	KT	cheY-homologous receiver domain	-	-	-	-	-	-	-	-	-	-	-	-	Response_reg
BYD3_k127_6188162_30	1202532.FF52_19875	6.79e-25	108.0	COG0745@1|root,COG0745@2|Bacteria,4NXE8@976|Bacteroidetes,1IIY7@117743|Flavobacteriia,2NWJG@237|Flavobacterium	976|Bacteroidetes	T	cheY-homologous receiver domain	-	-	-	-	-	-	-	-	-	-	-	-	Response_reg
BYD3_k127_6188162_14	1123248.KB893326_gene1343	3.014e-154	495.0	COG4221@1|root,COG4221@2|Bacteria,4NFX8@976|Bacteroidetes	976|Bacteroidetes	S	KR domain	-	-	-	-	-	-	-	-	-	-	-	-	adh_short
BYD3_k127_6188162_5	1124780.ANNU01000016_gene1850	5.892e-229	720.0	COG0366@1|root,COG0366@2|Bacteria,4NFE4@976|Bacteroidetes,47MCU@768503|Cytophagia	976|Bacteroidetes	G	Alpha-amylase domain	treS	-	3.2.1.1,5.4.99.16	ko:K05343	ko00500,ko01100,map00500,map01100	-	R01557,R02108,R02112,R11262	RC01816	ko00000,ko00001,ko01000	-	GH13	-	Alpha-amylase,DUF3459,Malt_amylase_C
BYD3_k127_6188162_36	1282362.AEAC466_20450	3.28e-11	64.0	2C3CF@1|root,32RRR@2|Bacteria,1MZUG@1224|Proteobacteria,2UC1Q@28211|Alphaproteobacteria	28211|Alphaproteobacteria	S	Protein of unknown function (DUF3175)	-	-	-	-	-	-	-	-	-	-	-	-	DUF3175
BYD3_k127_6188162_25	1123248.KB893326_gene1340	1.482e-56	209.0	2D42T@1|root,32TG5@2|Bacteria,4NT28@976|Bacteroidetes,1IT84@117747|Sphingobacteriia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_6188162_16	485918.Cpin_6357	6.429e-117	387.0	COG0628@1|root,COG0628@2|Bacteria,4NFB2@976|Bacteroidetes,1IR5X@117747|Sphingobacteriia	976|Bacteroidetes	S	AI-2E family transporter	-	-	-	-	-	-	-	-	-	-	-	-	AI-2E_transport
BYD3_k127_6188162_6	700598.Niako_0791	4.735e-197	620.0	COG1730@1|root,COG1730@2|Bacteria,4PAM0@976|Bacteroidetes,1IW3E@117747|Sphingobacteriia	976|Bacteroidetes	O	unfolded protein binding	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_6188162_26	700598.Niako_0790	6.639e-43	161.0	COG2146@1|root,COG2146@2|Bacteria,4PNU4@976|Bacteroidetes	976|Bacteroidetes	P	Rieske [2Fe-2S] domain	-	-	-	-	-	-	-	-	-	-	-	-	Rieske
BYD3_k127_6188162_11	700598.Niako_0789	7.497e-170	541.0	COG3488@1|root,COG3488@2|Bacteria,4NGBS@976|Bacteroidetes,1IWE8@117747|Sphingobacteriia	976|Bacteroidetes	C	Di-haem oxidoreductase, putative peroxidase	-	-	-	-	-	-	-	-	-	-	-	-	DHOR
BYD3_k127_6188162_23	525373.HMPREF0766_13465	1.148e-60	216.0	COG1321@1|root,COG1321@2|Bacteria,4NGUP@976|Bacteroidetes,1IS87@117747|Sphingobacteriia	976|Bacteroidetes	K	Helix-turn-helix diphteria tox regulatory element	-	-	-	ko:K03709	-	-	-	-	ko00000,ko03000	-	-	-	Fe_dep_repr_C,Fe_dep_repress,FeoA
BYD3_k127_6188162_29	313606.M23134_07797	7.08e-26	122.0	COG0457@1|root,COG2208@1|root,COG0457@2|Bacteria,COG2208@2|Bacteria	2|Bacteria	T	phosphoserine phosphatase activity	srrB	-	-	-	-	-	-	-	-	-	-	-	7TMR-DISMED2,7TMR-DISM_7TM,CBS,HAMP,SpoIIE,TPR_12,TPR_8,Y_Y_Y,dCache_1
BYD3_k127_6188162_1	1089547.KB913013_gene4218	4.05e-294	917.0	COG4993@1|root,COG4993@2|Bacteria,4NKFA@976|Bacteroidetes,47NZW@768503|Cytophagia	976|Bacteroidetes	G	PQQ-like domain	-	-	1.1.5.2	ko:K00117	ko00030,ko01100,ko01110,ko01130,map00030,map01100,map01110,map01130	-	R06620	RC00066	ko00000,ko00001,ko01000	-	-	-	Cytochrome_CBB3,PQQ,PQQ_2
BYD3_k127_6188162_27	1249997.JHZW01000002_gene1750	1.156e-42	168.0	COG0454@1|root,COG0456@2|Bacteria,4NT7Q@976|Bacteroidetes,1IKU6@117743|Flavobacteriia,2PHTS@252356|Maribacter	976|Bacteroidetes	K	Acetyltransferase (GNAT) domain	-	-	-	-	-	-	-	-	-	-	-	-	Acetyltransf_1,Acetyltransf_10
BYD3_k127_6188162_9	760192.Halhy_3739	6.458e-175	557.0	COG2271@1|root,COG2271@2|Bacteria,4PM8E@976|Bacteroidetes,1J0WC@117747|Sphingobacteriia	976|Bacteroidetes	G	PFAM Major facilitator superfamily MFS-1	-	-	-	-	-	-	-	-	-	-	-	-	MFS_1
BYD3_k127_6188162_15	1123248.KB893318_gene4115	1.393e-150	482.0	COG0451@1|root,COG0451@2|Bacteria,4NGEH@976|Bacteroidetes,1IV7E@117747|Sphingobacteriia	976|Bacteroidetes	GM	ADP-glyceromanno-heptose 6-epimerase activity	-	-	-	-	-	-	-	-	-	-	-	-	Epimerase
BYD3_k127_6188162_13	1123248.KB893318_gene4116	1.123e-154	496.0	COG0329@1|root,COG0329@2|Bacteria,4NH72@976|Bacteroidetes,1IVHY@117747|Sphingobacteriia	976|Bacteroidetes	EM	Dihydrodipicolinate synthetase family	-	-	-	-	-	-	-	-	-	-	-	-	DHDPS
BYD3_k127_6188162_10	1150600.ADIARSV_0823	1.851e-174	554.0	COG1473@1|root,COG1473@2|Bacteria,4NGBI@976|Bacteroidetes,1INTB@117747|Sphingobacteriia	976|Bacteroidetes	S	amidohydrolase	amaA	-	-	ko:K01436	-	-	-	-	ko00000,ko01000,ko01002	-	-	-	M20_dimer,Peptidase_M20
BYD3_k127_6188162_24	471854.Dfer_1959	2.399e-58	206.0	COG2318@1|root,COG2318@2|Bacteria,4NNRD@976|Bacteroidetes,47PZE@768503|Cytophagia	976|Bacteroidetes	S	DinB family	-	-	-	-	-	-	-	-	-	-	-	-	DinB
BYD3_k127_6188162_18	1185876.BN8_05865	3.673e-82	289.0	28HUE@1|root,2Z815@2|Bacteria,4NHK5@976|Bacteroidetes,47P9E@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	DoxX,DoxX_2
BYD3_k127_6188162_28	1123248.KB893316_gene4650	1.11e-32	134.0	2E5XB@1|root,330M9@2|Bacteria,4NW0P@976|Bacteroidetes,1IU5F@117747|Sphingobacteriia	976|Bacteroidetes	S	Domain of unknown function (DUF4251)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4251
BYD3_k127_6188162_4	1408473.JHXO01000009_gene3460	1.855e-233	739.0	COG3525@1|root,COG3525@2|Bacteria,4NE08@976|Bacteroidetes,2FRAU@200643|Bacteroidia	976|Bacteroidetes	G	Fn3 associated	-	-	3.2.1.52	ko:K12373	ko00511,ko00513,ko00520,ko00531,ko00603,ko00604,ko01100,ko04142,map00511,map00513,map00520,map00531,map00603,map00604,map01100,map04142	M00079	R00022,R06004,R11316	RC00049	ko00000,ko00001,ko00002,ko01000,ko03110	-	GH20	-	Fn3_assoc,Glyco_hydro_20,Glyco_hydro_20b
BYD3_k127_6188162_21	1040989.AWZU01000057_gene5074	5.382e-70	242.0	COG1670@1|root,COG1670@2|Bacteria,1MXEE@1224|Proteobacteria,2U62V@28211|Alphaproteobacteria,3JVBK@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	J	Acetyltransferase (GNAT) domain	-	-	-	ko:K22479	-	-	-	-	ko00000	-	-	-	Acetyltransf_3
BYD3_k127_6188162_31	143224.JQMD01000002_gene2486	4.145e-19	97.0	2CJWE@1|root,30Y1E@2|Bacteria,4NNQQ@976|Bacteroidetes,1I40A@117743|Flavobacteriia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_6188162_34	1279009.ADICEAN_01775	1.794e-16	83.0	COG3795@1|root,COG3795@2|Bacteria,4NUTR@976|Bacteroidetes,47XVR@768503|Cytophagia	976|Bacteroidetes	S	YCII-related domain	-	-	-	-	-	-	-	-	-	-	-	-	YCII
BYD3_k127_6188162_22	1121904.ARBP01000026_gene657	1.037e-67	246.0	COG4941@1|root,COG4941@2|Bacteria,4NGCS@976|Bacteroidetes,47M8X@768503|Cytophagia	976|Bacteroidetes	K	TIGRFAM RNA polymerase sigma factor, sigma-70 family	-	-	-	ko:K03088	-	-	-	-	ko00000,ko03021	-	-	-	Sigma70_r2,Sigma70_r4_2
BYD3_k127_6188162_37	509635.N824_26275	9.689e-05	53.0	COG0589@1|root,COG0589@2|Bacteria,4NHBB@976|Bacteroidetes,1IT51@117747|Sphingobacteriia	976|Bacteroidetes	T	Belongs to the universal stress protein A family	-	-	-	-	-	-	-	-	-	-	-	-	Usp
BYD3_k127_6188162_7	1121007.AUML01000017_gene385	2.832e-194	619.0	COG0659@1|root,COG0659@2|Bacteria,4NE9G@976|Bacteroidetes,1HYXB@117743|Flavobacteriia,2YI8N@290174|Aquimarina	976|Bacteroidetes	P	Sulfate permease family	-	-	-	ko:K03321	-	-	-	-	ko00000,ko02000	2.A.53.3	-	-	Sulfate_transp
BYD3_k127_6188162_19	1237149.C900_03884	1.555e-80	286.0	COG0642@1|root,COG2205@2|Bacteria,4NEIS@976|Bacteroidetes,47MHI@768503|Cytophagia	976|Bacteroidetes	T	histidine kinase HAMP region domain protein	-	-	-	-	-	-	-	-	-	-	-	-	HAMP,HATPase_c,HisKA
BYD3_k127_6188162_20	1121007.AUML01000016_gene263	2.256e-74	256.0	COG0745@1|root,COG0745@2|Bacteria,4NG7D@976|Bacteroidetes,1HWZ6@117743|Flavobacteriia,2YHI9@290174|Aquimarina	976|Bacteroidetes	T	Transcriptional regulatory protein, C terminal	-	-	-	-	-	-	-	-	-	-	-	-	Response_reg,Trans_reg_C
BYD3_k127_6188162_8	485917.Phep_2085	2.299e-180	573.0	COG2855@1|root,COG2855@2|Bacteria,4NES6@976|Bacteroidetes,1IQMA@117747|Sphingobacteriia	976|Bacteroidetes	S	PFAM Uncharacterised protein family UPF0324	-	-	-	-	-	-	-	-	-	-	-	-	Cons_hypoth698
BYD3_k127_6188162_35	391596.PBAL39_01577	2.752e-16	83.0	COG0745@1|root,COG0745@2|Bacteria,4NSCP@976|Bacteroidetes,1IZ31@117747|Sphingobacteriia	976|Bacteroidetes	T	cheY-homologous receiver domain	-	-	-	-	-	-	-	-	-	-	-	-	Response_reg
BYD3_k127_6188162_3	1123234.AUKI01000011_gene1438	1.787e-238	757.0	COG1331@1|root,COG1331@2|Bacteria,4NFE2@976|Bacteroidetes,1HWWU@117743|Flavobacteriia	976|Bacteroidetes	O	Highly conserved protein containing a thioredoxin domain	-	-	-	ko:K06888	-	-	-	-	ko00000	-	-	-	GlcNAc_2-epim,Thioredox_DsbH
BYD3_k127_6188162_0	688270.Celal_2460	0.0	1168.0	COG4888@1|root,COG4888@2|Bacteria,4NEE8@976|Bacteroidetes,1HX4C@117743|Flavobacteriia	976|Bacteroidetes	S	PFAM ASPIC and UnbV	-	-	-	-	-	-	-	-	-	-	-	-	UnbV_ASPIC,VCBS
BYD3_k127_6188162_33	1279009.ADICEAN_01402	4.437e-18	84.0	COG2133@1|root,COG2133@2|Bacteria,4NDV1@976|Bacteroidetes,47MXD@768503|Cytophagia	976|Bacteroidetes	G	Glucose / Sorbosone dehydrogenase	-	-	-	-	-	-	-	-	-	-	-	-	GSDH
BYD3_k127_6191167_10	1123248.KB893326_gene1435	3.591e-75	259.0	COG2843@1|root,COG2843@2|Bacteria,4NI9W@976|Bacteroidetes,1J0CU@117747|Sphingobacteriia	976|Bacteroidetes	M	Bacterial capsule synthesis protein PGA_cap	-	-	-	ko:K07282	-	-	-	-	ko00000	-	-	-	PGA_cap
BYD3_k127_6191167_11	1237149.C900_02504	6.695e-70	243.0	COG1073@1|root,COG1073@2|Bacteria,4NMFG@976|Bacteroidetes,47QYJ@768503|Cytophagia	976|Bacteroidetes	S	Dienelactone hydrolase family	-	-	-	-	-	-	-	-	-	-	-	-	DLH
BYD3_k127_6191167_23	933262.AXAM01000081_gene2264	1.265e-06	51.0	COG2230@1|root,COG2230@2|Bacteria,1MX3U@1224|Proteobacteria,42PB7@68525|delta/epsilon subdivisions,2WJX5@28221|Deltaproteobacteria,2MHX3@213118|Desulfobacterales	28221|Deltaproteobacteria	M	Mycolic acid cyclopropane synthetase	-	-	2.1.1.79	ko:K00574	-	-	-	-	ko00000,ko01000	-	-	-	CMAS
BYD3_k127_6191167_9	1237149.C900_03065	9.443e-107	349.0	COG2823@1|root,COG2823@2|Bacteria,4NJ6H@976|Bacteroidetes,47UYC@768503|Cytophagia	976|Bacteroidetes	S	bacterial OsmY and nodulation domain	-	-	-	-	-	-	-	-	-	-	-	-	BON
BYD3_k127_6191167_15	926550.CLDAP_29650	4.448e-34	145.0	COG1503@1|root,COG1503@2|Bacteria,2G6UJ@200795|Chloroflexi	200795|Chloroflexi	J	translation release factor activity	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_6191167_13	1237149.C900_03066	9.947e-53	190.0	COG0071@1|root,COG0071@2|Bacteria,4NQXY@976|Bacteroidetes	976|Bacteroidetes	O	Belongs to the small heat shock protein (HSP20) family	-	-	-	ko:K13993	ko04141,map04141	-	-	-	ko00000,ko00001,ko03110	-	-	-	HSP20
BYD3_k127_6191167_17	1237149.C900_03071	5.796e-27	112.0	COG0236@1|root,COG0236@2|Bacteria,4NWTZ@976|Bacteroidetes,47X2T@768503|Cytophagia	976|Bacteroidetes	IQ	Phosphopantetheine attachment site	-	-	-	-	-	-	-	-	-	-	-	-	PP-binding
BYD3_k127_6191167_5	1237149.C900_03072	2.389e-167	533.0	COG0508@1|root,COG0508@2|Bacteria,4NE41@976|Bacteroidetes,47TKM@768503|Cytophagia	976|Bacteroidetes	C	e3 binding domain	-	-	2.3.1.12	ko:K00627	ko00010,ko00020,ko00620,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00020,map00620,map01100,map01110,map01120,map01130,map01200	M00307	R00209,R02569	RC00004,RC02742,RC02857	br01601,ko00000,ko00001,ko00002,ko01000	-	-	-	2-oxoacid_dh,Biotin_lipoyl,E3_binding
BYD3_k127_6191167_3	1237149.C900_03073	1.927e-177	560.0	COG0022@1|root,COG0022@2|Bacteria,4NFYK@976|Bacteroidetes,47TNM@768503|Cytophagia	976|Bacteroidetes	C	Transketolase, pyrimidine binding domain	-	-	1.2.4.1	ko:K00162	ko00010,ko00020,ko00620,ko01100,ko01110,ko01120,ko01130,ko01200,ko04066,ko04922,ko05230,map00010,map00020,map00620,map01100,map01110,map01120,map01130,map01200,map04066,map04922,map05230	M00307	R00014,R00209,R01699,R03270	RC00004,RC00027,RC00627,RC02742,RC02744,RC02882	br01601,ko00000,ko00001,ko00002,ko01000	-	-	-	Transket_pyr,Transketolase_C
BYD3_k127_6191167_18	1121324.CLIT_11c02980	7.956e-20	90.0	COG3324@1|root,COG3324@2|Bacteria,1U9T0@1239|Firmicutes,256I7@186801|Clostridia	2|Bacteria	E	translation initiation factor activity	-	-	-	ko:K06996	-	-	-	-	ko00000	-	-	-	Glyoxalase
BYD3_k127_6191167_19	1121324.CLIT_11c02940	1.567e-16	81.0	COG3324@1|root,COG3324@2|Bacteria,1U9T0@1239|Firmicutes,256I7@186801|Clostridia	2|Bacteria	E	translation initiation factor activity	-	-	-	ko:K06996	-	-	-	-	ko00000	-	-	-	Glyoxalase
BYD3_k127_6191167_4	1237149.C900_03075	1.783e-168	535.0	COG1071@1|root,COG1071@2|Bacteria,4NJMZ@976|Bacteroidetes,47U8U@768503|Cytophagia	976|Bacteroidetes	C	The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2)	-	-	1.2.4.1	ko:K00161	ko00010,ko00020,ko00620,ko01100,ko01110,ko01120,ko01130,ko01200,ko04066,ko04922,ko05230,map00010,map00020,map00620,map01100,map01110,map01120,map01130,map01200,map04066,map04922,map05230	M00307	R00014,R00209,R01699,R03270	RC00004,RC00027,RC00627,RC02742,RC02744,RC02882	br01601,ko00000,ko00001,ko00002,ko01000	-	-	-	E1_dh
BYD3_k127_6191167_0	1237149.C900_03076	0.0	998.0	COG0365@1|root,COG0365@2|Bacteria,4NEAD@976|Bacteroidetes,47TSB@768503|Cytophagia	976|Bacteroidetes	I	AMP-binding enzyme C-terminal domain	-	-	6.2.1.1	ko:K01895	ko00010,ko00620,ko00640,ko00680,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00620,map00640,map00680,map00720,map01100,map01110,map01120,map01130,map01200	M00357	R00235,R00236,R00316,R00926,R01354	RC00004,RC00012,RC00043,RC00070,RC02746,RC02816	ko00000,ko00001,ko00002,ko01000,ko01004	-	-	-	AMP-binding,AMP-binding_C
BYD3_k127_6191167_2	1237149.C900_03080	6.347e-262	818.0	COG0209@1|root,COG0209@2|Bacteria,4NEHQ@976|Bacteroidetes,47NQV@768503|Cytophagia	976|Bacteroidetes	F	Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and or for immediate growth after restoration of oxygen	-	-	1.17.4.1	ko:K00525	ko00230,ko00240,ko01100,map00230,map00240,map01100	M00053	R02017,R02018,R02019,R02024	RC00613	ko00000,ko00001,ko00002,ko01000,ko03400	-	-	-	Ribonuc_red_lgC,Ribonuc_red_lgN
BYD3_k127_6191167_22	1123037.AUDE01000019_gene3294	9.018e-12	71.0	COG3439@1|root,COG3439@2|Bacteria,4NQRI@976|Bacteroidetes,1I2XY@117743|Flavobacteriia	976|Bacteroidetes	S	Domain of unknown function DUF302	-	-	-	-	-	-	-	-	-	-	-	-	DUF302
BYD3_k127_6191167_14	1086011.HJ01_03286	1.305e-45	174.0	2C1H5@1|root,32R8P@2|Bacteria,4NS5E@976|Bacteroidetes,1I33F@117743|Flavobacteriia	976|Bacteroidetes	S	Domain of unknown function (DUF4136)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4136
BYD3_k127_6191167_21	665942.HMPREF1022_02705	2.371e-13	71.0	COG0297@1|root,COG0297@2|Bacteria,1R6U0@1224|Proteobacteria,42Q1W@68525|delta/epsilon subdivisions,2WJXW@28221|Deltaproteobacteria,2M8ZZ@213115|Desulfovibrionales	28221|Deltaproteobacteria	G	Starch synthase catalytic domain	-	-	-	-	-	-	-	-	-	-	-	-	Glyco_transf_4,Glyco_transf_5,Glycos_transf_1
BYD3_k127_6191167_1	1123248.KB893386_gene1942	8.56e-280	882.0	COG0474@1|root,COG0474@2|Bacteria,4NERM@976|Bacteroidetes,1IPZ9@117747|Sphingobacteriia	976|Bacteroidetes	P	TIGRFAM ATPase, P-type (transporting), HAD superfamily, subfamily IC	-	-	3.6.3.2	ko:K01531	-	-	-	-	ko00000,ko01000	3.A.3.4	-	-	Cation_ATPase_C,Cation_ATPase_N,E1-E2_ATPase,Hydrolase
BYD3_k127_6191167_6	927704.SELR_17760	2.619e-126	428.0	COG0171@1|root,COG0388@1|root,COG0171@2|Bacteria,COG0388@2|Bacteria,1TQ38@1239|Firmicutes,4H27N@909932|Negativicutes	909932|Negativicutes	H	NAD( ) synthase glutamine-hydrolyzing	nadE	-	6.3.5.1	ko:K01950	ko00760,ko01100,map00760,map01100	M00115	R00257	RC00010,RC00100	ko00000,ko00001,ko00002,ko01000	-	-	-	CN_hydrolase,NAD_synthase
BYD3_k127_6191167_8	313603.FB2170_04695	2.018e-112	368.0	COG0428@1|root,COG0428@2|Bacteria,4NGQ8@976|Bacteroidetes,1HXM3@117743|Flavobacteriia,2PG7B@252356|Maribacter	976|Bacteroidetes	P	ZIP Zinc transporter	gufA	-	-	ko:K07238	-	-	-	-	ko00000,ko02000	2.A.5.5	-	-	Zip
BYD3_k127_6191167_20	1121012.AUKX01000073_gene38	3.139e-14	88.0	COG3055@1|root,COG3291@1|root,COG3055@2|Bacteria,COG3291@2|Bacteria,4NHHD@976|Bacteroidetes,1HWPE@117743|Flavobacteriia	976|Bacteroidetes	M	Di-glucose binding within endoplasmic reticulum	-	-	-	-	-	-	-	-	-	-	-	-	He_PIG,Kelch_1,Kelch_6,Malectin,PKD
BYD3_k127_6191167_7	1121957.ATVL01000013_gene61	4.701e-114	415.0	COG3291@1|root,COG3291@2|Bacteria,4PKMZ@976|Bacteroidetes,47XXW@768503|Cytophagia	976|Bacteroidetes	T	TIGRFAM Por secretion system C-terminal sorting domain	-	-	-	-	-	-	-	-	-	-	-	-	CHU_C
BYD3_k127_6191167_16	1121904.ARBP01000008_gene3445	1.141e-31	146.0	COG2335@1|root,COG3386@1|root,COG2335@2|Bacteria,COG3386@2|Bacteria	2|Bacteria	G	gluconolactonase activity	-	-	-	ko:K19519	-	-	-	-	ko00000,ko04516	-	-	-	Fasciclin
BYD3_k127_6224964_1	1237149.C900_01203	2.114e-140	451.0	COG0183@1|root,COG0183@2|Bacteria,4NE3Q@976|Bacteroidetes,47JS8@768503|Cytophagia	976|Bacteroidetes	I	Belongs to the thiolase family	-	-	2.3.1.9	ko:K00626	ko00071,ko00072,ko00280,ko00310,ko00362,ko00380,ko00620,ko00630,ko00640,ko00650,ko00720,ko00900,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,ko02020,map00071,map00072,map00280,map00310,map00362,map00380,map00620,map00630,map00640,map00650,map00720,map00900,map01100,map01110,map01120,map01130,map01200,map01212,map02020	M00088,M00095,M00373,M00374,M00375	R00238,R01177	RC00004,RC00326	ko00000,ko00001,ko00002,ko01000,ko04147	-	-	-	Thiolase_C,Thiolase_N
BYD3_k127_6224964_5	1237149.C900_01204	5.509e-11	71.0	COG4700@1|root,COG4700@2|Bacteria,4PPNH@976|Bacteroidetes,47YQ2@768503|Cytophagia	976|Bacteroidetes	T	PFAM Protein kinase domain	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_6224964_4	1237149.C900_01204	7.995e-31	130.0	COG4700@1|root,COG4700@2|Bacteria,4PPNH@976|Bacteroidetes,47YQ2@768503|Cytophagia	976|Bacteroidetes	T	PFAM Protein kinase domain	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_6224964_2	1237149.C900_01205	4.275e-121	396.0	COG2304@1|root,COG2304@2|Bacteria,4NF7Y@976|Bacteroidetes,47NJQ@768503|Cytophagia	976|Bacteroidetes	S	PFAM von Willebrand factor type A	batB	-	-	ko:K07114	-	-	-	-	ko00000,ko02000	1.A.13.2.2,1.A.13.2.3	-	-	BatA,VWA,VWA_2
BYD3_k127_6224964_3	1124780.ANNU01000020_gene3311	8.428e-48	176.0	COG0454@1|root,COG0456@2|Bacteria,4NQVT@976|Bacteroidetes,47QAW@768503|Cytophagia	976|Bacteroidetes	K	PFAM GCN5-related N-acetyltransferase	paiA	-	-	-	-	-	-	-	-	-	-	-	Acetyltransf_1,Acetyltransf_10
BYD3_k127_6224964_0	1124780.ANNU01000005_gene2525	1.12e-154	499.0	COG3437@1|root,COG4251@1|root,COG3437@2|Bacteria,COG4251@2|Bacteria,4PP2V@976|Bacteroidetes,47MH1@768503|Cytophagia	976|Bacteroidetes	T	His Kinase A (phosphoacceptor) domain	-	-	-	-	-	-	-	-	-	-	-	-	CHASE3,HATPase_c,HisKA,Response_reg
BYD3_k127_63451_8	1237149.C900_04582	2.822e-121	392.0	COG3279@1|root,COG3279@2|Bacteria,4NFWA@976|Bacteroidetes,47N62@768503|Cytophagia	976|Bacteroidetes	T	Response regulator of the LytR AlgR family	-	-	-	ko:K02477	-	-	-	-	ko00000,ko02022	-	-	-	LytTR,Response_reg
BYD3_k127_63451_9	1237149.C900_04581	5.811e-108	360.0	COG2972@1|root,COG2972@2|Bacteria,4NI09@976|Bacteroidetes,47K66@768503|Cytophagia	976|Bacteroidetes	T	Histidine kinase	-	-	-	-	-	-	-	-	-	-	-	-	His_kinase
BYD3_k127_63451_0	1237149.C900_04576	0.0	1570.0	COG0178@1|root,COG0178@2|Bacteria,4NFQU@976|Bacteroidetes,47K0C@768503|Cytophagia	976|Bacteroidetes	L	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate	uvrA	-	-	ko:K03701	ko03420,map03420	-	-	-	ko00000,ko00001,ko03400	-	-	-	ABC_tran
BYD3_k127_63451_10	378806.STAUR_0002	5.347e-91	307.0	COG4989@1|root,COG4989@2|Bacteria,1MY3G@1224|Proteobacteria,437V0@68525|delta/epsilon subdivisions,2X34H@28221|Deltaproteobacteria,2YU7T@29|Myxococcales	28221|Deltaproteobacteria	S	Aldo/keto reductase family	-	-	-	-	-	-	-	-	-	-	-	-	Aldo_ket_red
BYD3_k127_63451_11	1124780.ANNU01000005_gene2378	3.116e-88	299.0	COG0596@1|root,COG0596@2|Bacteria,4NDZI@976|Bacteroidetes,47JB4@768503|Cytophagia	976|Bacteroidetes	S	Serine aminopeptidase, S33	ybfF	-	-	-	-	-	-	-	-	-	-	-	Abhydrolase_1
BYD3_k127_63451_5	1237149.C900_00811	5.315e-180	572.0	COG0019@1|root,COG0019@2|Bacteria,4NE7X@976|Bacteroidetes,47JBT@768503|Cytophagia	976|Bacteroidetes	E	Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine	lysA	-	4.1.1.20	ko:K01586	ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00300,map01100,map01110,map01120,map01130,map01230	M00016,M00525,M00526,M00527	R00451	RC00299	ko00000,ko00001,ko00002,ko01000	-	-	-	Orn_Arg_deC_N,Orn_DAP_Arg_deC
BYD3_k127_63451_2	1237149.C900_00753	2.867e-300	934.0	COG4232@1|root,COG4232@2|Bacteria,4NEW6@976|Bacteroidetes,47JTC@768503|Cytophagia	976|Bacteroidetes	CO	Cytochrome c biogenesis protein transmembrane region	dsbD	-	1.8.1.8	ko:K04084	-	-	-	-	ko00000,ko01000,ko03110	5.A.1.1	-	-	DsbC,DsbD,Thioredoxin_7
BYD3_k127_63451_6	1237149.C900_00751	1.512e-165	531.0	COG0739@1|root,COG0739@2|Bacteria,4NECF@976|Bacteroidetes,47MV0@768503|Cytophagia	976|Bacteroidetes	M	PFAM Peptidase family M23	-	-	-	-	-	-	-	-	-	-	-	-	Peptidase_M23
BYD3_k127_63451_4	1237149.C900_00750	7.132e-262	827.0	COG1752@1|root,COG1752@2|Bacteria,4NDXY@976|Bacteroidetes,47QDC@768503|Cytophagia	976|Bacteroidetes	M	Patatin-like phospholipase	-	-	-	ko:K07001	-	-	-	-	ko00000	-	-	-	Patatin
BYD3_k127_63451_3	1237149.C900_00749	4.779e-280	875.0	COG2885@1|root,COG2885@2|Bacteria,4NEND@976|Bacteroidetes,47KG7@768503|Cytophagia	976|Bacteroidetes	M	Belongs to the ompA family	-	-	-	-	-	-	-	-	-	-	-	-	OmpA,PD40
BYD3_k127_63451_12	1237149.C900_00748	4.791e-54	198.0	COG2885@1|root,COG2885@2|Bacteria,4NEND@976|Bacteroidetes,47KG7@768503|Cytophagia	976|Bacteroidetes	M	Belongs to the ompA family	-	-	-	-	-	-	-	-	-	-	-	-	CarboxypepD_reg,OmpA,PD40,RicinB_lectin_2
BYD3_k127_63451_13	1237149.C900_04917	1.519e-38	154.0	2ETG7@1|root,338QK@2|Bacteria,4NW0M@976|Bacteroidetes,47X76@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_63451_7	1237149.C900_00747	2.226e-154	501.0	COG1012@1|root,COG1012@2|Bacteria,4NGHD@976|Bacteroidetes,47KZA@768503|Cytophagia	976|Bacteroidetes	C	Belongs to the aldehyde dehydrogenase family	alkH	-	1.2.1.3,1.2.1.68	ko:K00128,ko:K00154	ko00010,ko00053,ko00071,ko00280,ko00310,ko00330,ko00340,ko00380,ko00410,ko00561,ko00620,ko00625,ko00903,ko00981,ko01100,ko01110,ko01120,ko01130,map00010,map00053,map00071,map00280,map00310,map00330,map00340,map00380,map00410,map00561,map00620,map00625,map00903,map00981,map01100,map01110,map01120,map01130	M00135	R00264,R00631,R00710,R00904,R01752,R01986,R02549,R02678,R02940,R02957,R03283,R03869,R04065,R04506,R04903,R05050,R05237,R05238,R05286,R06366,R08146	RC00047,RC00071,RC00080,RC00186,RC00218,RC00242,RC00816,RC01500	ko00000,ko00001,ko00002,ko01000	-	-	-	Aldedh
BYD3_k127_63451_1	1237149.C900_00745	0.0	1122.0	COG2982@1|root,COG2982@2|Bacteria,4NEJQ@976|Bacteroidetes,47KBD@768503|Cytophagia	976|Bacteroidetes	M	AsmA-like C-terminal region	-	-	-	-	-	-	-	-	-	-	-	-	AsmA,AsmA_2
BYD3_k127_6435085_0	1185876.BN8_03452	1.215e-79	273.0	COG0790@1|root,COG0790@2|Bacteria,4PPS3@976|Bacteroidetes,47TGJ@768503|Cytophagia	976|Bacteroidetes	S	Protein of unknown function (DUF2911)	-	-	-	-	-	-	-	-	-	-	-	-	DUF2911
BYD3_k127_6435085_2	525257.HMPREF0204_10373	1.42e-18	94.0	COG4585@1|root,COG4585@2|Bacteria,4NNE1@976|Bacteroidetes,1I1SW@117743|Flavobacteriia,3ZQV9@59732|Chryseobacterium	976|Bacteroidetes	T	Histidine kinase	-	-	-	-	-	-	-	-	-	-	-	-	HATPase_c,HisKA_3
BYD3_k127_6435085_1	929562.Emtol_2785	1.76e-23	108.0	COG2197@1|root,COG2197@2|Bacteria,4NKAD@976|Bacteroidetes,47NAQ@768503|Cytophagia	976|Bacteroidetes	T	helix_turn_helix, Lux Regulon	-	-	-	-	-	-	-	-	-	-	-	-	GerE,Response_reg
BYD3_k127_6435085_3	1124780.ANNU01000024_gene3041	4.945e-14	85.0	COG0457@1|root,COG2208@1|root,COG0457@2|Bacteria,COG2208@2|Bacteria,4NUFW@976|Bacteroidetes	976|Bacteroidetes	KT	COGs COG2208 Serine phosphatase RsbU regulator of sigma subunit	-	-	-	-	-	-	-	-	-	-	-	-	SpoIIE,TPR_12,TPR_8
BYD3_k127_6526044_6	1150600.ADIARSV_3506	2.36e-59	211.0	COG3685@1|root,COG3685@2|Bacteria,4NN8V@976|Bacteroidetes,1IRV4@117747|Sphingobacteriia	976|Bacteroidetes	S	Domain of unknown function (DUF892)	-	-	-	-	-	-	-	-	-	-	-	-	DUF892
BYD3_k127_6526044_0	743722.Sph21_5077	0.0	1154.0	COG0693@1|root,COG0753@1|root,COG0693@2|Bacteria,COG0753@2|Bacteria,4NFQX@976|Bacteroidetes,1IQS5@117747|Sphingobacteriia	976|Bacteroidetes	C	Serves to protect cells from the toxic effects of hydrogen peroxide	katE	-	1.11.1.6	ko:K03781	ko00380,ko00630,ko01110,ko01130,ko01200,ko04011,ko04016,ko04068,ko04146,ko04211,ko04212,ko04213,ko05014,map00380,map00630,map01110,map01130,map01200,map04011,map04016,map04068,map04146,map04211,map04212,map04213,map05014	M00532	R00009,R00602,R02670	RC00034,RC00767,RC02141,RC02755	ko00000,ko00001,ko00002,ko01000	-	-	-	Catalase,Catalase-rel,DJ-1_PfpI
BYD3_k127_6526044_5	485918.Cpin_6495	1.069e-69	244.0	2ECYW@1|root,32WQ9@2|Bacteria,4NUET@976|Bacteroidetes,1IWGJ@117747|Sphingobacteriia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_6526044_3	1048983.EL17_16130	1.51e-102	338.0	COG1801@1|root,COG1801@2|Bacteria,4NHAD@976|Bacteroidetes,47XHT@768503|Cytophagia	976|Bacteroidetes	S	Protein of unknown function DUF72	-	-	-	-	-	-	-	-	-	-	-	-	DUF72
BYD3_k127_6526044_2	391596.PBAL39_11972	1.678e-140	452.0	COG0451@1|root,COG0451@2|Bacteria,4NDV4@976|Bacteroidetes,1IQ44@117747|Sphingobacteriia	976|Bacteroidetes	GM	Catalyzes the two-step NADP-dependent conversion of GDP- 4-dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction	fcl	-	1.1.1.271	ko:K02377	ko00051,ko00520,ko01100,map00051,map00520,map01100	-	R05692	RC01014	ko00000,ko00001,ko01000	-	-	-	Epimerase
BYD3_k127_6526044_7	1379270.AUXF01000002_gene1144	2.007e-33	139.0	COG1073@1|root,COG1073@2|Bacteria	2|Bacteria	S	thiolester hydrolase activity	-	-	-	ko:K06889	-	-	-	-	ko00000	-	-	-	Hydrolase_4,Peptidase_S9
BYD3_k127_6526044_4	471854.Dfer_3708	5.33e-98	327.0	COG1082@1|root,COG1082@2|Bacteria,4NGKX@976|Bacteroidetes,47JP9@768503|Cytophagia	976|Bacteroidetes	G	Xylose isomerase domain protein TIM barrel	-	-	-	-	-	-	-	-	-	-	-	-	AP_endonuc_2
BYD3_k127_6526044_1	643867.Ftrac_0359	6.875e-159	528.0	COG3391@1|root,COG5644@1|root,COG3391@2|Bacteria,COG5644@2|Bacteria,4PMIF@976|Bacteroidetes	976|Bacteroidetes	E	chlorophyll binding	-	-	-	-	-	-	-	-	-	-	-	-	HYR,Laminin_G_3
BYD3_k127_668393_3	1286632.P278_10550	5.034e-262	821.0	COG4206@1|root,COG4206@2|Bacteria,4NZWU@976|Bacteroidetes,1I86Y@117743|Flavobacteriia	976|Bacteroidetes	H	TonB-linked outer membrane protein, SusC RagA family	-	-	-	-	-	-	-	-	-	-	-	-	CarbopepD_reg_2,Plug,STN,TonB_dep_Rec
BYD3_k127_668393_12	1286632.P278_10540	4.321e-64	226.0	COG1309@1|root,COG1309@2|Bacteria,4NMW9@976|Bacteroidetes,1HZ4Z@117743|Flavobacteriia	976|Bacteroidetes	K	Bacterial regulatory proteins, tetR family	-	-	-	-	-	-	-	-	-	-	-	-	TetR_N
BYD3_k127_668393_2	742767.HMPREF9456_02544	3.033e-273	857.0	COG5368@1|root,COG5368@2|Bacteria,4NE34@976|Bacteroidetes,2FQV0@200643|Bacteroidia,22ZDJ@171551|Porphyromonadaceae	976|Bacteroidetes	S	Putative glucoamylase	-	-	-	-	-	-	-	-	-	-	-	-	Glycoamylase
BYD3_k127_668393_7	1218075.BAYA01000018_gene4798	1.296e-99	338.0	COG4638@1|root,COG4638@2|Bacteria,1MWXW@1224|Proteobacteria,2VJT8@28216|Betaproteobacteria,1KCCX@119060|Burkholderiaceae	28216|Betaproteobacteria	P	Ring hydroxylating alpha subunit (catalytic domain)	-	-	-	ko:K00479	-	-	-	-	ko00000	-	-	-	Rieske,Ring_hydroxyl_A
BYD3_k127_668393_0	1131812.JQMS01000001_gene933	0.0	1078.0	COG1472@1|root,COG1472@2|Bacteria,4NE90@976|Bacteroidetes,1HWVV@117743|Flavobacteriia,2NYP3@237|Flavobacterium	976|Bacteroidetes	G	Glycosyl hydrolase family 3 C-terminal domain	-	-	3.2.1.21	ko:K05349	ko00460,ko00500,ko00940,ko01100,ko01110,map00460,map00500,map00940,map01100,map01110	-	R00026,R02558,R02887,R02985,R03527,R04949,R04998,R10035,R10039,R10040	RC00049,RC00059,RC00171,RC00262,RC00397,RC00451,RC00714,RC00746,RC01248	ko00000,ko00001,ko01000	-	GH3	-	Glyco_hydro_3,Glyco_hydro_3_C
BYD3_k127_668393_16	160799.PBOR_09115	4.768e-34	145.0	COG2211@1|root,COG2211@2|Bacteria,1UIHN@1239|Firmicutes,4ISI6@91061|Bacilli,27736@186822|Paenibacillaceae	91061|Bacilli	G	Maltose permease	-	-	-	ko:K05820,ko:K07112	-	-	-	-	ko00000,ko02000	2.A.1.27	-	-	MFS_1_like
BYD3_k127_668393_11	1185876.BN8_03583	2.548e-71	248.0	COG0363@1|root,COG0363@2|Bacteria,4NPBJ@976|Bacteroidetes,47NRI@768503|Cytophagia	976|Bacteroidetes	G	Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase	-	-	3.5.99.6	ko:K02080,ko:K02564	ko00052,ko00520,ko01100,map00052,map00520,map01100	-	R00765,R08365	RC00163	ko00000,ko00001,ko01000	-	-	-	Glucosamine_iso
BYD3_k127_668393_9	929556.Solca_3760	3.582e-87	302.0	2BZ4W@1|root,2Z7PQ@2|Bacteria,4NJ1R@976|Bacteroidetes,1IXXV@117747|Sphingobacteriia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_668393_4	1121011.AUCB01000016_gene4007	2.601e-213	671.0	COG0467@1|root,COG0467@2|Bacteria,4NKD2@976|Bacteroidetes,1I7AB@117743|Flavobacteriia	976|Bacteroidetes	T	KaiC	-	-	-	ko:K08482	-	-	-	-	ko00000	-	-	-	ATPase
BYD3_k127_668393_14	1121011.AUCB01000016_gene4006	1.33e-42	157.0	COG4251@1|root,COG4251@2|Bacteria,4NSP2@976|Bacteroidetes,1I9GZ@117743|Flavobacteriia	976|Bacteroidetes	T	Decreases the phosphorylation of KaiC, a component of the main circadian regulator in cyanobacteria	-	-	-	ko:K08481	-	-	-	-	ko00000	-	-	-	KaiB
BYD3_k127_668393_15	1121011.AUCB01000016_gene4005	1.121e-39	149.0	COG4251@1|root,COG4251@2|Bacteria,4NTN4@976|Bacteroidetes	976|Bacteroidetes	T	KaiB	-	-	-	ko:K08481	-	-	-	-	ko00000	-	-	-	KaiB
BYD3_k127_668393_5	1121011.AUCB01000016_gene4004	3.496e-148	480.0	COG4251@1|root,COG4251@2|Bacteria,4NK2S@976|Bacteroidetes,1IINZ@117743|Flavobacteriia	976|Bacteroidetes	T	Histidine kinase	-	-	-	-	-	-	-	-	-	-	-	-	HATPase_c,HisKA,PAS,PAS_4,PAS_9
BYD3_k127_668393_8	861299.J421_1374	2.135e-90	308.0	COG2423@1|root,COG2423@2|Bacteria	2|Bacteria	E	ornithine cyclodeaminase activity	ocd2	-	1.4.1.1,1.5.1.25,4.3.1.12	ko:K01750,ko:K18258,ko:K19244	ko00250,ko00330,ko00430,ko01100,ko01110,ko01130,ko01230,map00250,map00330,map00430,map01100,map01110,map01130,map01230	-	R00396,R00671	RC00008,RC00354	ko00000,ko00001,ko01000,ko04147	-	-	-	OCD_Mu_crystall
BYD3_k127_668393_13	1237149.C900_05044	1.839e-59	209.0	COG1846@1|root,COG1846@2|Bacteria,4P8CE@976|Bacteroidetes	976|Bacteroidetes	K	helix_turn_helix multiple antibiotic resistance protein	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_668393_1	1237149.C900_05043	0.0	1052.0	COG1033@1|root,COG1033@2|Bacteria,4NE0M@976|Bacteroidetes,47JQA@768503|Cytophagia	976|Bacteroidetes	S	COGs COG1033 exporter of the RND superfamily protein	-	-	-	-	-	-	-	-	-	-	-	-	MMPL
BYD3_k127_668393_6	1237149.C900_05042	3.05e-124	402.0	COG2834@1|root,COG2834@2|Bacteria,4NERK@976|Bacteroidetes	976|Bacteroidetes	M	Outer membrane lipoprotein-sorting protein	-	-	-	-	-	-	-	-	-	-	-	-	LolA_like
BYD3_k127_668393_10	1237149.C900_05041	5.095e-82	277.0	28I6N@1|root,2Z89J@2|Bacteria,4NKPT@976|Bacteroidetes	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_6721505_14	153721.MYP_2705	3.227e-238	742.0	COG2873@1|root,COG2873@2|Bacteria,4NE27@976|Bacteroidetes,47M8Z@768503|Cytophagia	976|Bacteroidetes	E	PFAM Cys Met metabolism PLP-dependent enzyme	metY	-	2.5.1.49	ko:K01740	ko00270,ko01100,map00270,map01100	-	R01287,R04859	RC00020,RC02821,RC02848	ko00000,ko00001,ko01000	-	-	-	Cys_Met_Meta_PP
BYD3_k127_6721505_28	1089547.KB913013_gene3855	1.684e-143	464.0	COG2021@1|root,COG2021@2|Bacteria,4NFG2@976|Bacteroidetes,47KMZ@768503|Cytophagia	976|Bacteroidetes	E	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine	metXA	-	2.3.1.31	ko:K00641	ko00270,ko01100,ko01130,map00270,map01100,map01130	-	R01776	RC00004,RC00041	ko00000,ko00001,ko01000	-	-	-	Abhydrolase_1
BYD3_k127_6721505_31	929556.Solca_2248	6.852e-136	444.0	COG0460@1|root,COG0460@2|Bacteria,4NHRC@976|Bacteroidetes,1IPM4@117747|Sphingobacteriia	976|Bacteroidetes	E	homoserine dehydrogenase	hom	-	1.1.1.3	ko:K00003	ko00260,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00260,map00270,map00300,map01100,map01110,map01120,map01130,map01230	M00017,M00018	R01773,R01775	RC00087	ko00000,ko00001,ko00002,ko01000	-	-	-	Homoserine_dh,NAD_binding_3
BYD3_k127_6721505_10	1120965.AUBV01000003_gene308	2.507e-245	762.0	COG2871@1|root,COG2871@2|Bacteria,4NFKC@976|Bacteroidetes,47NPF@768503|Cytophagia	976|Bacteroidetes	C	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. The first step is catalyzed by NqrF, which accepts electrons from NADH and reduces ubiquinone-1 to ubisemiquinone by a one-electron transfer pathway	nqrF	-	1.6.5.8	ko:K00351	-	-	-	-	ko00000,ko01000	-	-	-	FAD_binding_6,Fer2,NAD_binding_1
BYD3_k127_6721505_69	929703.KE386491_gene3507	9.868e-08	60.0	2A8WM@1|root,30Y00@2|Bacteria,4PBNB@976|Bacteroidetes,47W32@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_6721505_41	1123278.KB893557_gene3852	1.432e-92	316.0	2CEJ5@1|root,2Z7RK@2|Bacteria,4NGWQ@976|Bacteroidetes,47N0C@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	Phenol_MetA_deg
BYD3_k127_6721505_20	643867.Ftrac_0441	1.539e-176	572.0	COG3447@1|root,COG4251@1|root,COG3447@2|Bacteria,COG4251@2|Bacteria,4NI5R@976|Bacteroidetes	976|Bacteroidetes	T	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase	-	-	-	-	-	-	-	-	-	-	-	-	HATPase_c,HisKA,MASE1
BYD3_k127_6721505_19	1237149.C900_01796	2.906e-179	569.0	COG0010@1|root,COG0010@2|Bacteria,4NE5W@976|Bacteroidetes,47JES@768503|Cytophagia	976|Bacteroidetes	E	Belongs to the arginase family	-	-	3.5.3.8	ko:K01479	ko00340,ko01100,map00340,map01100	M00045	R02285	RC00221,RC00681	ko00000,ko00001,ko00002,ko01000	-	-	-	Arginase
BYD3_k127_6721505_39	1237149.C900_01808	1.288e-101	339.0	COG1561@1|root,COG1561@2|Bacteria,4NEU4@976|Bacteroidetes,47JXA@768503|Cytophagia	976|Bacteroidetes	S	PFAM YicC-like family, N-terminal region	-	-	-	-	-	-	-	-	-	-	-	-	DUF1732,YicC_N
BYD3_k127_6721505_2	1237149.C900_01809	0.0	1166.0	COG0823@1|root,COG0823@2|Bacteria,4PNV1@976|Bacteroidetes,47YIP@768503|Cytophagia	976|Bacteroidetes	U	Involved in the tonB-independent uptake of proteins	-	-	-	-	-	-	-	-	-	-	-	-	PD40
BYD3_k127_6721505_42	1120965.AUBV01000006_gene2293	1.296e-90	310.0	COG0665@1|root,COG0665@2|Bacteria,4NFCD@976|Bacteroidetes,47JI9@768503|Cytophagia	976|Bacteroidetes	E	PFAM FAD dependent oxidoreductase	thiO	-	-	-	-	-	-	-	-	-	-	-	DAO
BYD3_k127_6721505_46	153721.MYP_4849	3.222e-82	278.0	COG0491@1|root,COG0491@2|Bacteria,4NE2Y@976|Bacteroidetes,47PA3@768503|Cytophagia	976|Bacteroidetes	P	PFAM Metallo-beta-lactamase superfamily	-	-	-	-	-	-	-	-	-	-	-	-	Lactamase_B
BYD3_k127_6721505_49	1237149.C900_01812	5.831e-67	234.0	COG1183@1|root,COG1183@2|Bacteria,4NNUZ@976|Bacteroidetes,47PCF@768503|Cytophagia	976|Bacteroidetes	I	Belongs to the CDP-alcohol phosphatidyltransferase class-I family	pssA	-	2.7.8.8	ko:K17103	ko00260,ko00564,ko01100,ko01110,map00260,map00564,map01100,map01110	M00093	R01800	RC00002,RC00017,RC02795	ko00000,ko00001,ko00002,ko01000	-	-	-	CDP-OH_P_transf
BYD3_k127_6721505_6	1237149.C900_01813	6.137e-289	924.0	COG1572@1|root,COG1572@2|Bacteria,4NDY7@976|Bacteroidetes,47KIF@768503|Cytophagia	976|Bacteroidetes	S	Peptidase family C25	porU	-	-	-	-	-	-	-	-	-	-	-	Peptidase_C25
BYD3_k127_6721505_32	1237149.C900_01814	6.883e-130	426.0	COG2067@1|root,COG2067@2|Bacteria,4NDZW@976|Bacteroidetes,47KQT@768503|Cytophagia	976|Bacteroidetes	I	long-chain fatty acid transport protein	porV	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_6721505_45	1121481.AUAS01000008_gene2939	5.37e-85	296.0	COG0612@1|root,COG0612@2|Bacteria,4NEPT@976|Bacteroidetes,47JF1@768503|Cytophagia	976|Bacteroidetes	S	PFAM Peptidase M16 inactive domain	-	-	-	-	-	-	-	-	-	-	-	-	Peptidase_M16,Peptidase_M16_C
BYD3_k127_6721505_7	452637.Oter_3131	2.092e-276	868.0	COG1874@1|root,COG1874@2|Bacteria	2|Bacteria	G	beta-galactosidase activity	-	-	-	-	-	-	-	-	-	-	-	-	GHL6,Glyco_hydro_42,Glyco_hydro_42M
BYD3_k127_6721505_50	1237149.C900_00985	4.039e-65	227.0	COG0262@1|root,COG0262@2|Bacteria,4NM92@976|Bacteroidetes,47QQZ@768503|Cytophagia	976|Bacteroidetes	H	RibD C-terminal domain	-	-	-	-	-	-	-	-	-	-	-	-	RibD_C
BYD3_k127_6721505_63	694427.Palpr_2302	2.167e-29	122.0	COG0454@1|root,COG0456@2|Bacteria	2|Bacteria	K	acetyltransferase	phnO	GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006793,GO:0006807,GO:0008080,GO:0008150,GO:0008152,GO:0009987,GO:0016407,GO:0016410,GO:0016740,GO:0016746,GO:0016747,GO:0019634,GO:0019637,GO:0033051,GO:0044237,GO:0044424,GO:0044464,GO:0071704,GO:1901564	-	ko:K09994	ko00440,map00440	-	R11479	RC00096	ko00000,ko00001,ko01000	-	-	-	Acetyltransf_1,Acetyltransf_10
BYD3_k127_6721505_3	926549.KI421517_gene107	0.0	1045.0	COG3525@1|root,COG3525@2|Bacteria,4NIZM@976|Bacteroidetes,47K39@768503|Cytophagia	976|Bacteroidetes	G	Glycosyl hydrolase, family 20, catalytic domain	-	-	-	-	-	-	-	-	-	-	-	-	Glyco_hydro_20b
BYD3_k127_6721505_0	616991.JPOO01000001_gene2737	0.0	1528.0	COG1413@1|root,COG2010@1|root,COG2133@1|root,COG1413@2|Bacteria,COG2010@2|Bacteria,COG2133@2|Bacteria,4NH6B@976|Bacteroidetes,1HZB8@117743|Flavobacteriia,23H5B@178469|Arenibacter	976|Bacteroidetes	CG	Cytochrome c	-	-	-	-	-	-	-	-	-	-	-	-	Cytochrom_C,GSDH,HEAT_2
BYD3_k127_6721505_27	504472.Slin_3895	5.224e-150	482.0	COG1312@1|root,COG1312@2|Bacteria,4NF30@976|Bacteroidetes,47N1H@768503|Cytophagia	976|Bacteroidetes	G	Catalyzes the dehydration of D-mannonate	-	-	4.2.1.8	ko:K01686	ko00040,ko01100,map00040,map01100	M00061	R05606	RC00543	ko00000,ko00001,ko00002,ko01000	-	-	-	UxuA
BYD3_k127_6721505_59	313606.M23134_00208	3.706e-52	197.0	COG3595@1|root,COG3595@2|Bacteria,4NJCC@976|Bacteroidetes,47MIA@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	DUF4097
BYD3_k127_6721505_5	1121904.ARBP01000004_gene1108	4.528e-296	929.0	COG0577@1|root,COG0577@2|Bacteria,4NDUK@976|Bacteroidetes,47JJN@768503|Cytophagia	976|Bacteroidetes	V	FtsX-like permease family	-	-	-	-	-	-	-	-	-	-	-	-	FtsX,MacB_PCD
BYD3_k127_6721505_36	1123248.KB893318_gene4139	2.27e-115	377.0	2BZ6M@1|root,2Z7HW@2|Bacteria,4NJ7B@976|Bacteroidetes,1IXEI@117747|Sphingobacteriia	976|Bacteroidetes	S	Domain of Unknown Function (DUF1080)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1080
BYD3_k127_6721505_21	1506583.JQJY01000002_gene1639	5.584e-171	540.0	COG0388@1|root,COG0388@2|Bacteria,4NGWX@976|Bacteroidetes,1I00B@117743|Flavobacteriia,2NUDR@237|Flavobacterium	976|Bacteroidetes	S	Carbon-nitrogen hydrolase	-	-	-	-	-	-	-	-	-	-	-	-	CN_hydrolase
BYD3_k127_6721505_25	700598.Niako_1282	2.699e-153	492.0	COG0673@1|root,COG0673@2|Bacteria,4NFGY@976|Bacteroidetes,1ITTB@117747|Sphingobacteriia	976|Bacteroidetes	S	Oxidoreductase domain protein	-	-	-	-	-	-	-	-	-	-	-	-	GFO_IDH_MocA,GFO_IDH_MocA_C
BYD3_k127_6721505_11	929703.KE386491_gene3582	4.063e-242	758.0	COG4108@1|root,COG4108@2|Bacteria,4NFEZ@976|Bacteroidetes,47JQE@768503|Cytophagia	976|Bacteroidetes	J	Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP	prfC	-	-	ko:K02837	-	-	-	-	ko00000,ko03012	-	-	-	GTP_EFTU,GTP_EFTU_D2,RF3_C
BYD3_k127_6721505_23	761193.Runsl_1646	9.338e-167	529.0	COG0667@1|root,COG0667@2|Bacteria,4NHA1@976|Bacteroidetes,47NMZ@768503|Cytophagia	976|Bacteroidetes	C	aldo keto reductase	-	-	-	-	-	-	-	-	-	-	-	-	Aldo_ket_red
BYD3_k127_6721505_66	1173027.Mic7113_2401	4.309e-21	109.0	COG0457@1|root,COG0515@1|root,COG0457@2|Bacteria,COG0515@2|Bacteria,1FZWQ@1117|Cyanobacteria,1H6WA@1150|Oscillatoriales	1117|Cyanobacteria	KLT	PFAM Protein kinase domain	-	-	2.7.11.1	ko:K08884	-	-	-	-	ko00000,ko01000,ko01001	-	-	-	Pkinase,TPR_1,TPR_11,TPR_16,TPR_2,TPR_6,TPR_8
BYD3_k127_6721505_71	929704.Myrod_3492	0.0003507	45.0	2DR2H@1|root,339W7@2|Bacteria,4NXRG@976|Bacteroidetes,1I6K3@117743|Flavobacteriia,47J4H@76831|Myroides	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_6721505_4	1237149.C900_03253	0.0	1030.0	COG0443@1|root,COG0443@2|Bacteria,4NERF@976|Bacteroidetes,47JCZ@768503|Cytophagia	976|Bacteroidetes	O	Heat shock 70 kDa protein	dnaK	-	-	ko:K04043	ko03018,ko04212,ko05152,map03018,map04212,map05152	-	-	-	ko00000,ko00001,ko03019,ko03029,ko03110,ko04147	1.A.33.1	-	-	HSP70
BYD3_k127_6721505_53	1233951.IO90_13550	2.691e-62	221.0	2E2E1@1|root,32XIR@2|Bacteria,4NUDT@976|Bacteroidetes,1IAY1@117743|Flavobacteriia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_6721505_16	1237149.C900_04086	1.352e-206	669.0	COG0577@1|root,COG0577@2|Bacteria,4NDUK@976|Bacteroidetes,47JYF@768503|Cytophagia	976|Bacteroidetes	V	MacB-like periplasmic core domain	-	-	-	-	-	-	-	-	-	-	-	-	FtsX,MacB_PCD
BYD3_k127_6721505_68	1150600.ADIARSV_3688	6.809e-12	69.0	2EK7X@1|root,33DY9@2|Bacteria,4NYAQ@976|Bacteroidetes,1IUER@117747|Sphingobacteriia	976|Bacteroidetes	S	Virus attachment protein p12 family	-	-	-	-	-	-	-	-	-	-	-	-	P12
BYD3_k127_6721505_24	1121904.ARBP01000001_gene5817	6.101e-155	496.0	COG0535@1|root,COG0535@2|Bacteria,4NGWY@976|Bacteroidetes,47K59@768503|Cytophagia	976|Bacteroidetes	C	Radical SAM	-	-	-	-	-	-	-	-	-	-	-	-	Fer4_12,Radical_SAM,SPASM
BYD3_k127_6721505_34	1237149.C900_01804	2.525e-124	409.0	28I3N@1|root,2Z87C@2|Bacteria,4NE8P@976|Bacteroidetes,47M50@768503|Cytophagia	976|Bacteroidetes	S	Domain of unknown function (DUF4105)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4105
BYD3_k127_6721505_35	1237149.C900_00704	1.838e-119	390.0	COG0705@1|root,COG0705@2|Bacteria,4NGVJ@976|Bacteroidetes,47JAM@768503|Cytophagia	976|Bacteroidetes	S	PFAM Rhomboid family	-	-	-	-	-	-	-	-	-	-	-	-	Rhomboid
BYD3_k127_6721505_58	1237149.C900_00705	2.064e-55	199.0	COG0705@1|root,COG0705@2|Bacteria,4NIYR@976|Bacteroidetes,47PBZ@768503|Cytophagia	976|Bacteroidetes	S	PFAM Rhomboid family	-	-	3.4.21.105	ko:K09650	-	-	-	-	ko00000,ko01000,ko01002,ko03029	-	-	-	Rhomboid
BYD3_k127_6721505_8	1237149.C900_00706	2.074e-254	797.0	COG0323@1|root,COG0323@2|Bacteria,4NDWJ@976|Bacteroidetes,47KZU@768503|Cytophagia	976|Bacteroidetes	L	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex	mutL	GO:0003674,GO:0003676,GO:0003677,GO:0003697,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0032300,GO:0032991,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1990391	-	ko:K03572	ko03430,map03430	-	-	-	ko00000,ko00001,ko03400	-	-	-	DNA_mis_repair,HATPase_c_3,MutL_C
BYD3_k127_6721505_67	1237149.C900_00707	3.859e-15	80.0	2E1YR@1|root,32X7B@2|Bacteria,4NUBX@976|Bacteroidetes,47R5A@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_6721505_13	1237149.C900_00708	1.979e-239	772.0	COG1472@1|root,COG1680@1|root,COG1472@2|Bacteria,COG1680@2|Bacteria,4NET8@976|Bacteroidetes,47K15@768503|Cytophagia	976|Bacteroidetes	G	Glycosyl hydrolase family 3 N terminal domain	-	-	-	-	-	-	-	-	-	-	-	-	Beta-lactamase,Glyco_hydro_3,Glyco_hydro_3_C
BYD3_k127_6721505_17	1237149.C900_00709	8.946e-198	621.0	COG0438@1|root,COG0438@2|Bacteria,4NFPA@976|Bacteroidetes,47JT9@768503|Cytophagia	976|Bacteroidetes	M	PFAM Glycosyl transferases group 1	bshA	-	-	ko:K00754	-	-	-	-	ko00000,ko01000	-	GT4	-	Glyco_transf_4,Glycos_transf_1
BYD3_k127_6721505_43	1237149.C900_00710	1.234e-87	295.0	COG3000@1|root,COG3000@2|Bacteria,4NMV7@976|Bacteroidetes,47PA0@768503|Cytophagia	976|Bacteroidetes	I	Fatty acid hydroxylase	-	-	-	-	-	-	-	-	-	-	-	-	FA_hydroxylase
BYD3_k127_6721505_18	1237149.C900_00713	3.017e-187	589.0	COG4867@1|root,COG4867@2|Bacteria,4NFMA@976|Bacteroidetes,47K13@768503|Cytophagia	976|Bacteroidetes	S	von Willebrand factor, type A	-	-	-	-	-	-	-	-	-	-	-	-	VWA_2
BYD3_k127_6721505_9	1237149.C900_00714	1.815e-245	766.0	COG1239@1|root,COG1239@2|Bacteria,4NF1J@976|Bacteroidetes,47JD2@768503|Cytophagia	976|Bacteroidetes	H	magnesium chelatase	chlI	-	6.6.1.1	ko:K03405	ko00860,ko01100,ko01110,map00860,map01100,map01110	-	R03877	RC01012	ko00000,ko00001,ko01000	-	-	-	AAA_5,Sigma54_activat
BYD3_k127_6721505_54	1237149.C900_00715	3.975e-62	221.0	COG2865@1|root,COG2865@2|Bacteria,4NGPG@976|Bacteroidetes,47N5X@768503|Cytophagia	976|Bacteroidetes	K	transcriptional regulator	-	-	-	-	-	-	-	-	-	-	-	-	AlbA_2
BYD3_k127_6721505_12	1237149.C900_00716	1.454e-240	748.0	COG1875@1|root,COG1875@2|Bacteria,4NDUI@976|Bacteroidetes,47M94@768503|Cytophagia	976|Bacteroidetes	T	PIN domain	ybeZ_1	-	-	ko:K07175	-	-	-	-	ko00000	-	-	-	PIN_4,PhoH
BYD3_k127_6721505_29	1237149.C900_02882	3.308e-140	449.0	COG0413@1|root,COG0413@2|Bacteria,4NDX4@976|Bacteroidetes,47K8P@768503|Cytophagia	976|Bacteroidetes	H	Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha-ketoisovalerate to form ketopantoate	panB	-	2.1.2.11	ko:K00606	ko00770,ko01100,ko01110,map00770,map01100,map01110	M00119	R01226	RC00022,RC00200	ko00000,ko00001,ko00002,ko01000	-	-	-	Pantoate_transf
BYD3_k127_6721505_56	1237149.C900_02880	5.93e-59	208.0	COG2065@1|root,COG2065@2|Bacteria,4NNRI@976|Bacteroidetes,47QMM@768503|Cytophagia	976|Bacteroidetes	F	Pyrimidine operon attenuation protein uracil phosphoribosyltransferase	pyrR	-	2.4.2.9	ko:K02825	ko00240,ko01100,map00240,map01100	-	R00966	RC00063	ko00000,ko00001,ko01000,ko03000	-	-	-	Pribosyltran
BYD3_k127_6721505_48	1237149.C900_02879	2.527e-69	239.0	COG1522@1|root,COG1522@2|Bacteria,4NMYA@976|Bacteroidetes,47P8E@768503|Cytophagia	976|Bacteroidetes	K	transcriptional regulator	-	-	-	ko:K03719,ko:K05800	-	-	-	-	ko00000,ko03000,ko03036	-	-	-	AsnC_trans_reg,HTH_24
BYD3_k127_6721505_52	1227739.Hsw_0817	2.259e-62	229.0	COG0438@1|root,COG0438@2|Bacteria,4PAVB@976|Bacteroidetes,47UKE@768503|Cytophagia	976|Bacteroidetes	M	Glycosyl transferases group 1	-	-	-	-	-	-	-	-	-	-	-	-	Glyco_transf_4,Glycos_transf_1
BYD3_k127_6721505_55	796606.BMMGA3_07100	1.643e-59	213.0	COG0438@1|root,COG0438@2|Bacteria	2|Bacteria	M	transferase activity, transferring glycosyl groups	-	-	-	-	-	-	-	-	-	-	-	-	Glycos_transf_2,Methyltransf_11,Methyltransf_25
BYD3_k127_6721505_57	313606.M23134_03603	8.049e-56	203.0	COG0438@1|root,COG0438@2|Bacteria,4PMDN@976|Bacteroidetes	976|Bacteroidetes	M	transferase activity, transferring glycosyl groups	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_6721505_40	1227739.Hsw_0816	1.45e-100	341.0	COG0438@1|root,COG0438@2|Bacteria,4NQKE@976|Bacteroidetes,47SF0@768503|Cytophagia	976|Bacteroidetes	M	Glycosyltransferase Family 4	-	-	2.4.1.291	ko:K17248	-	-	-	-	ko00000,ko01000,ko01003	-	GT4	-	Glyco_transf_4,Glycos_transf_1
BYD3_k127_6721505_62	1122605.KB893647_gene409	9.211e-37	153.0	COG0438@1|root,COG0438@2|Bacteria	2|Bacteria	M	transferase activity, transferring glycosyl groups	expC	-	-	-	-	-	-	-	-	-	-	-	Glyco_trans_1_4,Glyco_trans_4_3,Glycos_transf_1
BYD3_k127_6721505_65	1296415.JACC01000044_gene2760	9.078e-26	118.0	COG2242@1|root,COG2242@2|Bacteria,4PJX7@976|Bacteroidetes,1IDMJ@117743|Flavobacteriia,2YHWJ@290174|Aquimarina	976|Bacteroidetes	H	Methyltransferase FkbM domain	-	-	-	-	-	-	-	-	-	-	-	-	Methyltransf_21
BYD3_k127_6721505_47	1227739.Hsw_1396	4.93e-73	261.0	COG0438@1|root,COG0438@2|Bacteria,4NEHW@976|Bacteroidetes	976|Bacteroidetes	M	Glycosyl transferases group 1	-	-	-	-	-	-	-	-	-	-	-	-	Glyco_trans_1_4,Glyco_transf_4,Glycos_transf_1
BYD3_k127_6721505_64	1469557.JSWF01000014_gene2601	3.631e-26	119.0	COG1216@1|root,COG4123@1|root,COG1216@2|Bacteria,COG4123@2|Bacteria,4NFEP@976|Bacteroidetes,1HWUH@117743|Flavobacteriia	976|Bacteroidetes	S	Glycosyl transferase family 2	-	-	-	-	-	-	-	-	-	-	-	-	Glyco_transf_7C,Glycos_transf_2
BYD3_k127_6721505_60	1205680.CAKO01000006_gene3363	8.51e-41	158.0	COG0500@1|root,COG0500@2|Bacteria	2|Bacteria	Q	methyltransferase activity	-	GO:0008150,GO:0040007	-	-	-	-	-	-	-	-	-	-	Methyltransf_11
BYD3_k127_6721505_37	32057.KB217478_gene1814	9.971e-115	383.0	COG1134@1|root,COG1134@2|Bacteria,1G28R@1117|Cyanobacteria,1HMN9@1161|Nostocales	1117|Cyanobacteria	GM	ABC-type polysaccharide polyol phosphate transport system ATPase component	-	-	-	ko:K09691	ko02010,map02010	M00250	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.103	-	-	ABC_tran,Wzt_C
BYD3_k127_6721505_44	153721.MYP_1007	5.398e-87	295.0	COG1682@1|root,COG1682@2|Bacteria,4NF36@976|Bacteroidetes,47NFE@768503|Cytophagia	976|Bacteroidetes	GM	PFAM ABC-2 type transporter	-	-	-	ko:K09690	ko02010,map02010	M00250	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.103	-	-	ABC2_membrane
BYD3_k127_6721505_38	1313301.AUGC01000001_gene1578	7.46e-103	345.0	COG0438@1|root,COG0438@2|Bacteria,4NJ6W@976|Bacteroidetes	976|Bacteroidetes	M	Pfam Glycosyl transferases group 1	-	-	-	-	-	-	-	-	-	-	-	-	Glyco_trans_1_4,Glycos_transf_1
BYD3_k127_6721505_30	1237149.C900_02864	4.799e-137	449.0	28ICP@1|root,2Z8EZ@2|Bacteria,4NKKI@976|Bacteroidetes,47N2N@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_6721505_26	1237149.C900_02863	2.023e-152	492.0	COG0457@1|root,COG0457@2|Bacteria,4PM6F@976|Bacteroidetes,47Y4H@768503|Cytophagia	976|Bacteroidetes	S	Tetratricopeptide repeat	-	-	-	-	-	-	-	-	-	-	-	-	TPR_8
BYD3_k127_6721505_51	1237149.C900_02862	2.088e-62	222.0	2C6AJ@1|root,304IU@2|Bacteria,4NPQW@976|Bacteroidetes,47Q1B@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_6721505_33	760192.Halhy_3296	6.782e-128	419.0	COG0399@1|root,COG0399@2|Bacteria,4NEBI@976|Bacteroidetes,1IPSU@117747|Sphingobacteriia	976|Bacteroidetes	E	COGs COG0399 pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis	eryC	-	-	-	-	-	-	-	-	-	-	-	DegT_DnrJ_EryC1
BYD3_k127_6721505_1	1237149.C900_02861	0.0	1260.0	COG1807@1|root,COG1807@2|Bacteria,4PKJX@976|Bacteroidetes,47KCA@768503|Cytophagia	976|Bacteroidetes	M	Protein of unknown function (DUF2723)	-	-	-	-	-	-	-	-	-	-	-	-	DUF2723
BYD3_k127_6721505_22	1121875.KB907549_gene2017	7.69e-167	536.0	COG1914@1|root,COG1914@2|Bacteria	2|Bacteria	P	metal ion transmembrane transporter activity	-	-	-	-	-	-	-	-	-	-	-	-	Nramp
BYD3_k127_6721505_61	1206733.BAGC01000040_gene1564	1.453e-37	146.0	COG3467@1|root,COG3467@2|Bacteria,2IKUR@201174|Actinobacteria	201174|Actinobacteria	S	Pyridoxamine 5'-phosphate oxidase	-	-	-	ko:K07005	-	-	-	-	ko00000	-	-	-	Pyridox_ox_2
BYD3_k127_6721505_15	1237149.C900_04816	3.496e-217	723.0	COG0745@1|root,COG3292@1|root,COG5002@1|root,COG0745@2|Bacteria,COG3292@2|Bacteria,COG5002@2|Bacteria,4P0IA@976|Bacteroidetes,47TR0@768503|Cytophagia	976|Bacteroidetes	T	Y_Y_Y domain	-	-	-	-	-	-	-	-	-	-	-	-	HATPase_c,HTH_18,HisKA,Response_reg,Y_Y_Y
BYD3_k127_672378_8	1237149.C900_01494	4.646e-110	364.0	COG0577@1|root,COG0577@2|Bacteria,4NDW7@976|Bacteroidetes,47N35@768503|Cytophagia	976|Bacteroidetes	V	FtsX-like permease family	-	-	-	-	-	-	-	-	-	-	-	-	FtsX,MacB_PCD
BYD3_k127_672378_22	471854.Dfer_4525	2.181e-16	93.0	COG3291@1|root,COG3291@2|Bacteria,4PN3M@976|Bacteroidetes,47Y8X@768503|Cytophagia	976|Bacteroidetes	S	Repeats in polycystic kidney disease 1 (PKD1) and other proteins	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_672378_16	1121957.ATVL01000014_gene1459	5.538e-48	190.0	COG5563@1|root,COG5563@2|Bacteria,4PHUI@976|Bacteroidetes,47VHU@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_672378_25	225937.HP15_2671	0.0002687	52.0	COG0697@1|root,COG0697@2|Bacteria,1MXCD@1224|Proteobacteria,1S37V@1236|Gammaproteobacteria	1236|Gammaproteobacteria	EG	of the drug metabolite transporter (DMT) superfamily	-	-	-	-	-	-	-	-	-	-	-	-	EamA
BYD3_k127_672378_23	1121904.ARBP01000001_gene5681	2.777e-10	69.0	2ESC2@1|root,33JWV@2|Bacteria,4NXYV@976|Bacteroidetes	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_672378_21	1124780.ANNU01000047_gene2264	6.234e-29	134.0	2DEYA@1|root,2ZPS3@2|Bacteria,4P7RR@976|Bacteroidetes	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_672378_10	471854.Dfer_1419	1.823e-95	323.0	COG1162@1|root,COG1162@2|Bacteria,4NE24@976|Bacteroidetes,47PF6@768503|Cytophagia	976|Bacteroidetes	S	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit	-	-	3.1.3.100	ko:K06949	ko00730,ko01100,map00730,map01100	-	R00615,R02135	RC00002,RC00017	ko00000,ko00001,ko01000,ko03009	-	-	-	RsgA_GTPase
BYD3_k127_672378_2	1279009.ADICEAN_00047	1.587e-176	568.0	COG1413@1|root,COG2133@1|root,COG1413@2|Bacteria,COG2133@2|Bacteria,4NHGP@976|Bacteroidetes,47TS8@768503|Cytophagia	976|Bacteroidetes	CG	Glucose / Sorbosone dehydrogenase	-	-	-	-	-	-	-	-	-	-	-	-	Cytochrom_C,GSDH
BYD3_k127_672378_5	1123276.KB893268_gene4956	2.221e-159	512.0	COG2367@1|root,COG2367@2|Bacteria,4NH6K@976|Bacteroidetes,47K31@768503|Cytophagia	976|Bacteroidetes	V	Beta-lactamase enzyme family	-	-	-	-	-	-	-	-	-	-	-	-	Beta-lactamase2
BYD3_k127_672378_19	1121899.Q764_03510	1.972e-41	155.0	COG2315@1|root,COG2315@2|Bacteria,4NTRF@976|Bacteroidetes,1ID1Z@117743|Flavobacteriia,2NWYS@237|Flavobacterium	976|Bacteroidetes	S	YjbR	-	-	-	-	-	-	-	-	-	-	-	-	YjbR
BYD3_k127_672378_6	926554.KI912671_gene275	3.038e-126	415.0	COG3391@1|root,COG3391@2|Bacteria	2|Bacteria	CO	amine dehydrogenase activity	-	-	-	ko:K20276	ko02024,map02024	-	-	-	ko00000,ko00001	-	-	-	Big_5,Calx-beta
BYD3_k127_672378_3	1185876.BN8_02269	2.542e-173	556.0	COG1228@1|root,COG1228@2|Bacteria,4NEV0@976|Bacteroidetes,47MH5@768503|Cytophagia	976|Bacteroidetes	Q	Amidohydrolase family	-	-	-	-	-	-	-	-	-	-	-	-	Amidohydro_1
BYD3_k127_672378_15	1121481.AUAS01000003_gene3703	2.311e-55	204.0	COG2771@1|root,COG2771@2|Bacteria,4NZPE@976|Bacteroidetes,47SXW@768503|Cytophagia	976|Bacteroidetes	K	luxR family	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_672378_17	760192.Halhy_4948	1.26e-47	175.0	COG2259@1|root,COG2259@2|Bacteria,4P48I@976|Bacteroidetes	976|Bacteroidetes	S	DoxX	-	-	-	-	-	-	-	-	-	-	-	-	DoxX
BYD3_k127_672378_18	313606.M23134_06214	4.556e-47	182.0	COG2207@1|root,COG2207@2|Bacteria,4NF8Q@976|Bacteroidetes,47RSI@768503|Cytophagia	976|Bacteroidetes	K	helix_turn_helix, arabinose operon control protein	-	-	-	-	-	-	-	-	-	-	-	-	HTH_18
BYD3_k127_672378_13	929562.Emtol_3357	2.901e-70	242.0	COG2080@1|root,COG2080@2|Bacteria,4NMVV@976|Bacteroidetes,47Q3P@768503|Cytophagia	976|Bacteroidetes	C	Aerobic-type carbon monoxide dehydrogenase small subunit CoxS CutS homologs	-	-	1.3.99.16	ko:K07302	-	-	-	-	ko00000,ko01000	-	-	-	Fer2,Fer2_2
BYD3_k127_672378_0	471854.Dfer_0019	4.167e-316	982.0	COG1529@1|root,COG1529@2|Bacteria,4NFFU@976|Bacteroidetes,47N2K@768503|Cytophagia	976|Bacteroidetes	C	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain	-	-	1.3.99.16	ko:K07303	-	-	-	-	ko00000,ko01000	-	-	-	Ald_Xan_dh_C,Ald_Xan_dh_C2
BYD3_k127_672378_20	1121904.ARBP01000013_gene425	9.575e-32	127.0	COG1695@1|root,COG1695@2|Bacteria,4NTYF@976|Bacteroidetes,47R1G@768503|Cytophagia	976|Bacteroidetes	K	Transcriptional regulator PadR-like family	-	-	-	-	-	-	-	-	-	-	-	-	PadR
BYD3_k127_672378_4	1121904.ARBP01000006_gene3760	6.589e-169	561.0	COG0577@1|root,COG0577@2|Bacteria,4NDUK@976|Bacteroidetes,47MUE@768503|Cytophagia	976|Bacteroidetes	V	MacB-like periplasmic core domain	-	-	-	ko:K02004	-	M00258	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	FtsX,MacB_PCD
BYD3_k127_672378_24	1122182.KB903817_gene1779	8.368e-10	65.0	COG4319@1|root,COG4319@2|Bacteria,2IKUP@201174|Actinobacteria,4DG0I@85008|Micromonosporales	201174|Actinobacteria	S	Domain of unknown function (DUF4440)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4440
BYD3_k127_672378_9	1122176.KB903559_gene4120	1.972e-105	352.0	COG0809@1|root,COG0809@2|Bacteria,4NF2T@976|Bacteroidetes,1INNG@117747|Sphingobacteriia	2|Bacteria	J	Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)	queA	-	2.4.99.17	ko:K07568	-	-	-	-	ko00000,ko01000,ko03016	-	-	-	Queuosine_synth
BYD3_k127_672378_12	1122176.KB903559_gene4119	5.114e-76	262.0	COG1028@1|root,COG1028@2|Bacteria	1122176.KB903559_gene4119|-	IQ	oxidoreductase activity, acting on CH-OH group of donors	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_672378_7	1408473.JHXO01000005_gene1585	1.034e-118	389.0	COG2197@1|root,COG2203@1|root,COG2197@2|Bacteria,COG2203@2|Bacteria,4PPP0@976|Bacteroidetes	976|Bacteroidetes	KT	GAF domain	-	-	-	-	-	-	-	-	-	-	-	-	GAF_2,GerE
BYD3_k127_672378_1	1185876.BN8_00899	5.97e-179	588.0	COG0577@1|root,COG0577@2|Bacteria,4NM3D@976|Bacteroidetes,47JF6@768503|Cytophagia	976|Bacteroidetes	V	MacB-like periplasmic core domain	-	-	-	ko:K02004	-	M00258	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	FtsX,MacB_PCD
BYD3_k127_672378_14	1121481.AUAS01000001_gene4806	1.976e-68	243.0	COG2513@1|root,COG2513@2|Bacteria,4NMEH@976|Bacteroidetes,47R4B@768503|Cytophagia	976|Bacteroidetes	G	Phosphoenolpyruvate phosphomutase	-	-	-	-	-	-	-	-	-	-	-	-	PEP_mutase
BYD3_k127_672378_11	1048983.EL17_01260	1.426e-83	285.0	2DBB1@1|root,2Z854@2|Bacteria,4NNZD@976|Bacteroidetes,47Q80@768503|Cytophagia	976|Bacteroidetes	S	Domain of Unknown Function (DUF1206)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1206
BYD3_k127_6832221_0	714943.Mucpa_4122	4.057e-248	773.0	COG1069@1|root,COG1069@2|Bacteria,4NEFQ@976|Bacteroidetes,1IQ36@117747|Sphingobacteriia	976|Bacteroidetes	G	Belongs to the ribulokinase family	araB	-	2.7.1.16	ko:K00853	ko00040,ko01100,map00040,map01100	-	R01526,R02439	RC00002,RC00538	ko00000,ko00001,ko01000	-	-	-	FGGY_C,FGGY_N
BYD3_k127_6832221_2	925409.KI911562_gene245	1.414e-127	410.0	COG0235@1|root,COG0235@2|Bacteria,4NGMP@976|Bacteroidetes,1IPP5@117747|Sphingobacteriia	976|Bacteroidetes	G	PFAM Class II aldolase adducin	araD	-	5.1.3.4	ko:K03077	ko00040,ko00053,ko01100,ko01120,map00040,map00053,map01100,map01120	M00550	R05850	RC01479	ko00000,ko00001,ko00002,ko01000	-	-	-	Aldolase_II
BYD3_k127_6832221_1	1123248.KB893323_gene1581	6.192e-226	706.0	COG3533@1|root,COG3533@2|Bacteria,4NFW3@976|Bacteroidetes,1IR7T@117747|Sphingobacteriia	976|Bacteroidetes	S	coagulation factor 5 8 type	-	-	-	ko:K09955	-	-	-	-	ko00000	-	-	-	Glyco_hydro_127
BYD3_k127_6841817_2	880070.Cycma_2870	7.883e-83	281.0	COG2352@1|root,COG2352@2|Bacteria,4NFC0@976|Bacteroidetes,47NF0@768503|Cytophagia	976|Bacteroidetes	C	Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle	ppc	-	4.1.1.31	ko:K01595	ko00620,ko00680,ko00710,ko00720,ko01100,ko01120,ko01200,map00620,map00680,map00710,map00720,map01100,map01120,map01200	M00168,M00170,M00171,M00172,M00173,M00346,M00374	R00345	RC02741	ko00000,ko00001,ko00002,ko01000	-	-	-	PEPcase
BYD3_k127_6841817_5	1121957.ATVL01000010_gene255	1.675e-19	94.0	COG2146@1|root,COG2146@2|Bacteria,4NV1B@976|Bacteroidetes,47S5J@768503|Cytophagia	976|Bacteroidetes	P	nitrite reductase [NAD(P)H] activity	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_6841817_0	643867.Ftrac_2390	2.237e-146	471.0	COG0016@1|root,COG0016@2|Bacteria,4NF8I@976|Bacteroidetes,47JM1@768503|Cytophagia	976|Bacteroidetes	J	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily	pheS	GO:0003674,GO:0003824,GO:0004812,GO:0004826,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006432,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576	6.1.1.20	ko:K01889	ko00970,map00970	M00359,M00360	R03660	RC00055,RC00523	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	-	-	-	Phe_tRNA-synt_N,tRNA-synt_2d
BYD3_k127_6841817_1	1237149.C900_03113	4.096e-129	421.0	COG0472@1|root,COG0472@2|Bacteria,4NGKM@976|Bacteroidetes,47M4P@768503|Cytophagia	976|Bacteroidetes	M	PFAM Glycosyl transferase family 4	-	-	-	-	-	-	-	-	-	-	-	-	Glycos_transf_4
BYD3_k127_6841817_3	861299.J421_2491	2.048e-72	255.0	COG0451@1|root,COG0451@2|Bacteria	2|Bacteria	GM	ADP-glyceromanno-heptose 6-epimerase activity	gne	GO:0000271,GO:0003674,GO:0003824,GO:0005575,GO:0005975,GO:0005976,GO:0006629,GO:0008150,GO:0008152,GO:0008610,GO:0008653,GO:0009058,GO:0009059,GO:0009103,GO:0009987,GO:0016020,GO:0016051,GO:0016853,GO:0016854,GO:0016857,GO:0033692,GO:0034637,GO:0034645,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044262,GO:0044264,GO:0071704,GO:1901135,GO:1901137,GO:1901576,GO:1903509	5.1.3.26	ko:K19997	-	-	-	-	ko00000,ko01000	-	-	-	Epimerase
BYD3_k127_6841817_4	1214184.ALKY01000030_gene1274	7.029e-62	223.0	COG1215@1|root,COG1215@2|Bacteria,1V1CB@1239|Firmicutes,4IUCN@91061|Bacilli,1WTNE@1307|Streptococcus suis	91061|Bacilli	M	Glycosyl transferase family 2	-	-	-	-	-	-	-	-	-	-	-	-	Glycos_transf_2
BYD3_k127_6841817_6	867900.Celly_1360	3.006e-11	75.0	COG3307@1|root,COG3307@2|Bacteria,4NYC1@976|Bacteroidetes,1IH6W@117743|Flavobacteriia,1FAM5@104264|Cellulophaga	976|Bacteroidetes	M	O-Antigen ligase	-	-	-	-	-	-	-	-	-	-	-	-	Wzy_C
BYD3_k127_6890807_6	1123277.KB893195_gene5570	2.378e-25	121.0	COG1361@1|root,COG1361@2|Bacteria,4NT9E@976|Bacteroidetes,47QTN@768503|Cytophagia	976|Bacteroidetes	M	Domain of unknown function (DUF4157)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4157
BYD3_k127_6890807_0	1337936.IJ00_10760	1.073e-161	520.0	COG0464@1|root,COG0464@2|Bacteria,1G3QG@1117|Cyanobacteria,1HMVX@1161|Nostocales	1117|Cyanobacteria	O	ATPase family associated with various cellular activities (AAA)	-	-	-	-	-	-	-	-	-	-	-	-	AAA
BYD3_k127_6890807_3	1122176.KB903555_gene3771	2.117e-72	263.0	COG4249@1|root,COG4249@2|Bacteria,4NSC3@976|Bacteroidetes,1IZ2M@117747|Sphingobacteriia	976|Bacteroidetes	M	Caspase domain	-	-	-	-	-	-	-	-	-	-	-	-	Peptidase_C14,TPR_2
BYD3_k127_6890807_1	485918.Cpin_2795	4.309e-106	368.0	COG3023@1|root,COG4249@1|root,COG3023@2|Bacteria,COG4249@2|Bacteria,4NKV1@976|Bacteroidetes,1IXN5@117747|Sphingobacteriia	976|Bacteroidetes	V	Peptidase C14 caspase catalytic subunit p20	-	-	-	-	-	-	-	-	-	-	-	-	Peptidase_C14
BYD3_k127_6890807_7	877455.Metbo_1958	2.946e-16	92.0	COG1520@1|root,COG3291@1|root,arCOG02487@1|root,arCOG02516@1|root,arCOG02555@1|root,arCOG09729@1|root,arCOG02487@2157|Archaea,arCOG02492@2157|Archaea,arCOG02508@2157|Archaea,arCOG02516@2157|Archaea,arCOG02555@2157|Archaea,arCOG09729@2157|Archaea	2157|Archaea	E	Polymorphic membrane protein, Chlamydia	-	-	-	-	-	-	-	-	-	-	-	-	Big_3_5,Big_5,CBM_6,CHB_HEX_C_1,NosD,PKD,PQQ_3,SBBP
BYD3_k127_6890807_5	269797.Mbar_A3737	1.066e-34	151.0	COG1520@1|root,COG3291@1|root,arCOG03991@1|root,arCOG02482@2157|Archaea,arCOG02508@2157|Archaea,arCOG03991@2157|Archaea,2XUI1@28890|Euryarchaeota,2NBKW@224756|Methanomicrobia	28890|Euryarchaeota	S	Periplasmic copper-binding protein (NosD)	-	-	-	-	-	-	-	-	-	-	-	-	PKD
BYD3_k127_6890807_2	1454007.JAUG01000005_gene2790	1.246e-95	325.0	COG2333@1|root,COG2333@2|Bacteria	2|Bacteria	N	competence protein COMEC	-	-	-	ko:K02238	-	M00429	-	-	ko00000,ko00002,ko02044	3.A.11.1,3.A.11.2	-	-	LTD,Lactamase_B
BYD3_k127_6890807_4	253839.SSNG_06730	1.83e-37	146.0	COG1404@1|root,COG1404@2|Bacteria,2GK3D@201174|Actinobacteria	201174|Actinobacteria	O	Belongs to the peptidase S8 family	-	-	-	-	-	-	-	-	-	-	-	-	PA,Peptidase_S8
BYD3_k127_696893_3	1298593.TOL_2062	4.34e-19	91.0	2EM81@1|root,33EX5@2|Bacteria,1P06E@1224|Proteobacteria,1ST3B@1236|Gammaproteobacteria	1236|Gammaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_696893_1	616991.JPOO01000001_gene3365	1.126e-140	451.0	COG0385@1|root,COG0385@2|Bacteria,4NEIM@976|Bacteroidetes,1HY0F@117743|Flavobacteriia,23GWH@178469|Arenibacter	2|Bacteria	S	SBF-like CPA transporter family (DUF4137)	-	-	-	ko:K03453,ko:K14347	-	-	-	-	ko00000,ko02000,ko04147	2.A.28,2.A.93.1	-	-	SBF,SBF_like
BYD3_k127_696893_2	616991.JPOO01000001_gene3364	5.835e-104	340.0	COG0500@1|root,COG2226@2|Bacteria,4NP7E@976|Bacteroidetes,1I1YN@117743|Flavobacteriia	976|Bacteroidetes	Q	Methyltransferase type 11	-	-	-	-	-	-	-	-	-	-	-	-	Methyltransf_11,Methyltransf_25,Methyltransf_31
BYD3_k127_696893_0	1121904.ARBP01000015_gene179	2.986e-162	539.0	COG0577@1|root,COG0577@2|Bacteria,4NDUK@976|Bacteroidetes,47NTJ@768503|Cytophagia	976|Bacteroidetes	V	MacB-like periplasmic core domain	-	-	-	ko:K02004	-	M00258	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	FtsX,MacB_PCD
BYD3_k127_7032248_6	1434325.AZQN01000004_gene1720	2.064e-08	58.0	COG3695@1|root,COG3695@2|Bacteria,4NQ34@976|Bacteroidetes,47R4H@768503|Cytophagia	976|Bacteroidetes	L	PFAM 6-O-methylguanine DNA methyltransferase, DNA binding domain	ogt	-	2.1.1.63	ko:K00567,ko:K07443	-	-	-	-	ko00000,ko01000,ko03400	-	-	-	DNA_binding_1
BYD3_k127_7032248_2	1237149.C900_00543	1.143e-156	509.0	COG3291@1|root,COG3291@2|Bacteria	2|Bacteria	S	metallopeptidase activity	-	-	3.2.1.8	ko:K01181	-	-	-	-	ko00000,ko01000	-	-	-	CHU_C,DUF285,LRR_5,PKD,Peptidase_M43,fn3
BYD3_k127_7032248_8	1123248.KB893315_gene2985	0.0001422	45.0	COG0582@1|root,COG0582@2|Bacteria,4NDZJ@976|Bacteroidetes,1J0Q4@117747|Sphingobacteriia	976|Bacteroidetes	L	Belongs to the 'phage' integrase family	-	-	-	-	-	-	-	-	-	-	-	-	Arm-DNA-bind_5,Phage_int_SAM_5,Phage_integrase
BYD3_k127_7032248_3	1123248.KB893385_gene4836	5.886e-68	234.0	COG4974@1|root,COG4974@2|Bacteria,4NX3Q@976|Bacteroidetes,1ISC2@117747|Sphingobacteriia	976|Bacteroidetes	L	Belongs to the 'phage' integrase family	-	-	-	-	-	-	-	-	-	-	-	-	Arm-DNA-bind_5,Phage_int_SAM_5,Phage_integrase
BYD3_k127_7032248_5	682795.AciX8_1091	9.837e-16	85.0	COG4319@1|root,COG4319@2|Bacteria,3Y85G@57723|Acidobacteria,2JN5D@204432|Acidobacteriia	204432|Acidobacteriia	S	ketosteroid isomerase	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_7032248_4	869210.Marky_1400	1.476e-41	175.0	2FC4C@1|root,34489@2|Bacteria	2|Bacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_7032248_1	1123278.KB893581_gene976	3.864e-161	535.0	COG0577@1|root,COG0577@2|Bacteria,4NDUK@976|Bacteroidetes,47JJN@768503|Cytophagia	976|Bacteroidetes	V	FtsX-like permease family	-	-	-	ko:K02004	-	M00258	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	FtsX,MacB_PCD
BYD3_k127_7032248_0	1185876.BN8_01408	1.97e-223	720.0	COG0577@1|root,COG0577@2|Bacteria,4P1QR@976|Bacteroidetes,47U59@768503|Cytophagia	976|Bacteroidetes	V	MacB-like periplasmic core domain	-	-	-	-	-	-	-	-	-	-	-	-	FtsX,MacB_PCD
BYD3_k127_7033875_6	1237149.C900_03560	1.547e-46	173.0	COG1778@1|root,COG1778@2|Bacteria,4NMHD@976|Bacteroidetes,47QBU@768503|Cytophagia	976|Bacteroidetes	S	TIGRFAM 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family	kdsC	-	3.1.3.103,3.1.3.45	ko:K03270,ko:K21055	ko00540,ko01100,map00540,map01100	M00063	R03350,R11440	RC00017	ko00000,ko00001,ko00002,ko01000,ko01005	-	-	-	Hydrolase_3
BYD3_k127_7033875_1	1121904.ARBP01000004_gene1024	1.438e-259	824.0	COG2366@1|root,COG2366@2|Bacteria,4NEIX@976|Bacteroidetes,47JRC@768503|Cytophagia	976|Bacteroidetes	S	PFAM peptidase S45 penicillin amidase	-	-	3.5.1.11	ko:K01434	ko00311,ko01130,map00311,map01130	-	R02170	RC00166,RC00328	ko00000,ko00001,ko01000,ko01002	-	-	-	Penicil_amidase
BYD3_k127_7033875_8	1121904.ARBP01000005_gene4813	4.356e-15	79.0	2E8WY@1|root,33373@2|Bacteria,4NV40@976|Bacteroidetes,47RXW@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_7033875_5	643867.Ftrac_2367	1.676e-53	201.0	COG0596@1|root,COG0596@2|Bacteria,4PNPN@976|Bacteroidetes,47XAU@768503|Cytophagia	976|Bacteroidetes	S	Ndr family	-	-	3.4.11.5	ko:K01259	ko00330,map00330	-	R00135	-	ko00000,ko00001,ko01000,ko01002	-	-	-	Abhydrolase_1
BYD3_k127_7033875_4	1237149.C900_01571	3.179e-99	328.0	COG0846@1|root,COG0846@2|Bacteria,4NE9Q@976|Bacteroidetes,47KMH@768503|Cytophagia	976|Bacteroidetes	K	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form	cobB	-	-	ko:K12410	-	-	-	-	ko00000,ko01000	-	-	-	SIR2
BYD3_k127_7033875_0	1237149.C900_01570	0.0	1108.0	COG0550@1|root,COG0550@2|Bacteria,4NF9S@976|Bacteroidetes,47K7C@768503|Cytophagia	976|Bacteroidetes	L	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone	topA	-	5.99.1.2	ko:K03168	-	-	-	-	ko00000,ko01000,ko03032,ko03400	-	-	-	Topoisom_bac,Toprim,Toprim_C_rpt
BYD3_k127_7033875_7	1237149.C900_01569	1.179e-37	147.0	COG2062@1|root,COG2062@2|Bacteria,4NQFM@976|Bacteroidetes,47R7I@768503|Cytophagia	976|Bacteroidetes	T	PFAM Phosphoglycerate mutase	sixA	-	-	ko:K08296	-	-	-	-	ko00000,ko01000	-	-	-	His_Phos_1
BYD3_k127_7033875_3	1237149.C900_01568	9.27e-138	447.0	COG0010@1|root,COG0010@2|Bacteria,4NE01@976|Bacteroidetes,47KSG@768503|Cytophagia	976|Bacteroidetes	E	Belongs to the arginase family	speB	-	3.5.3.11	ko:K01480	ko00330,ko01100,map00330,map01100	M00133	R01157	RC00024,RC00329	ko00000,ko00001,ko00002,ko01000	-	-	-	Arginase
BYD3_k127_7033875_2	1237149.C900_01566	1.726e-161	519.0	COG1115@1|root,COG1115@2|Bacteria,4NDX7@976|Bacteroidetes,47JCJ@768503|Cytophagia	976|Bacteroidetes	E	PFAM Sodium alanine symporter family	-	-	-	ko:K03310	-	-	-	-	ko00000	2.A.25	-	-	Na_Ala_symp
BYD3_k127_703875_1	643867.Ftrac_1728	1.149e-40	156.0	COG0806@1|root,COG0806@2|Bacteria,4NQF0@976|Bacteroidetes,47QUB@768503|Cytophagia	976|Bacteroidetes	J	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes	rimM	-	-	ko:K02860	-	-	-	-	ko00000,ko03009	-	-	-	PRC,RimM
BYD3_k127_703875_0	1239962.C943_00656	3.126e-125	435.0	COG1629@1|root,COG1629@2|Bacteria,4NMTD@976|Bacteroidetes,47PTS@768503|Cytophagia	976|Bacteroidetes	P	CarboxypepD_reg-like domain	-	-	-	-	-	-	-	-	-	-	-	-	CarbopepD_reg_2,Plug
BYD3_k127_703875_2	313606.M23134_02400	2.023e-11	65.0	COG0336@1|root,COG0336@2|Bacteria,4NF2Q@976|Bacteroidetes,47MGG@768503|Cytophagia	976|Bacteroidetes	J	Belongs to the RNA methyltransferase TrmD family	trmD	GO:0001510,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008757,GO:0009019,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016423,GO:0016740,GO:0016741,GO:0016772,GO:0016779,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050518,GO:0070567,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360	2.1.1.228	ko:K00554	-	-	R00597	RC00003,RC00334	ko00000,ko01000,ko03016	-	-	-	tRNA_m1G_MT
BYD3_k127_7078204_31	620914.JH621257_gene1297	1.513e-109	369.0	COG2730@1|root,COG2730@2|Bacteria,4NJFV@976|Bacteroidetes,1IBWH@117743|Flavobacteriia	976|Bacteroidetes	G	Cellulase (glycosyl hydrolase family 5)	celC	-	3.2.1.4	ko:K01179	ko00500,ko01100,map00500,map01100	-	R06200,R11307,R11308	-	ko00000,ko00001,ko01000	-	GH5,GH9	-	Cellulase
BYD3_k127_7078204_74	1237149.C900_04737	8.708e-57	204.0	COG3222@1|root,COG3222@2|Bacteria,4NM7F@976|Bacteroidetes,47PF2@768503|Cytophagia	976|Bacteroidetes	S	protein conserved in bacteria	-	-	-	ko:K09931	-	-	-	-	ko00000	-	-	-	DUF2064
BYD3_k127_7078204_78	1237149.C900_04736	3.99e-46	172.0	COG0607@1|root,COG0607@2|Bacteria,4NQ61@976|Bacteroidetes,47Q3A@768503|Cytophagia	976|Bacteroidetes	P	Rhodanese Homology Domain	-	-	-	-	-	-	-	-	-	-	-	-	Rhodanese
BYD3_k127_7078204_34	1237149.C900_04735	7.057e-100	341.0	COG0463@1|root,COG0463@2|Bacteria,4PM7X@976|Bacteroidetes,47Y12@768503|Cytophagia	976|Bacteroidetes	M	Glycosyl transferase, family 2	-	-	-	-	-	-	-	-	-	-	-	-	GT87
BYD3_k127_7078204_9	1237149.C900_04734	2.555e-197	625.0	COG1215@1|root,COG1215@2|Bacteria,4NEK9@976|Bacteroidetes,47MJK@768503|Cytophagia	976|Bacteroidetes	M	glycosyl transferase family 2	-	-	-	-	-	-	-	-	-	-	-	-	Glyco_tranf_2_3,Glycos_transf_2
BYD3_k127_7078204_36	1237149.C900_04733	2e-97	323.0	COG1215@1|root,COG1215@2|Bacteria,4NFM1@976|Bacteroidetes,47M1F@768503|Cytophagia	976|Bacteroidetes	M	PFAM Glycosyl transferase family 2	-	-	-	-	-	-	-	-	-	-	-	-	Glycos_transf_2
BYD3_k127_7078204_4	1121904.ARBP01000006_gene3716	2.97e-259	810.0	COG0348@1|root,COG0348@2|Bacteria,4NHSX@976|Bacteroidetes,47KC5@768503|Cytophagia	976|Bacteroidetes	C	4Fe-4S dicluster domain	yccM_2	-	-	-	-	-	-	-	-	-	-	-	Fer4,Fer4_5,Fer4_7,Fer4_9
BYD3_k127_7078204_10	1237149.C900_02900	5.353e-187	594.0	COG0446@1|root,COG0446@2|Bacteria,4NET1@976|Bacteroidetes,47JW2@768503|Cytophagia	976|Bacteroidetes	S	Pyridine nucleotide-disulphide oxidoreductase	-	-	-	-	-	-	-	-	-	-	-	-	Pyr_redox_2
BYD3_k127_7078204_58	1185876.BN8_02803	1.834e-69	243.0	COG0398@1|root,COG0398@2|Bacteria,4NHA2@976|Bacteroidetes,47S54@768503|Cytophagia	976|Bacteroidetes	S	Protein of unknown function, DUF547	-	-	-	-	-	-	-	-	-	-	-	-	DUF547
BYD3_k127_7078204_6	1150600.ADIARSV_3084	5.157e-231	727.0	COG0058@1|root,COG0058@2|Bacteria,4NGR1@976|Bacteroidetes,1IPKK@117747|Sphingobacteriia	976|Bacteroidetes	G	COGs COG0058 Glucan phosphorylase	glgP	-	2.4.1.1,2.4.1.8	ko:K00688,ko:K00691	ko00500,ko01100,ko01110,ko02026,ko04217,ko04910,ko04922,ko04931,map00500,map01100,map01110,map02026,map04217,map04910,map04922,map04931	-	R01555,R02111	RC00049	ko00000,ko00001,ko01000	-	GH65,GT35	-	DUF3417,Phosphorylase
BYD3_k127_7078204_45	1237149.C900_03811	1.956e-92	315.0	COG1120@1|root,COG1120@2|Bacteria,4NG1Q@976|Bacteroidetes	976|Bacteroidetes	HP	abc transporter (atp-binding protein)	-	-	3.6.3.34	ko:K02013	ko02010,map02010	M00240	-	-	ko00000,ko00001,ko00002,ko01000,ko02000	3.A.1.14	-	-	ABC_tran
BYD3_k127_7078204_35	1237149.C900_03810	7.52e-100	337.0	COG0609@1|root,COG0609@2|Bacteria,4NEDU@976|Bacteroidetes,47KF2@768503|Cytophagia	976|Bacteroidetes	P	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily	btuC	-	-	ko:K02015	ko02010,map02010	M00240	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.14	-	-	FecCD
BYD3_k127_7078204_44	1048983.EL17_05030	1.765e-92	307.0	COG0087@1|root,COG0087@2|Bacteria,4NEAN@976|Bacteroidetes,47KMY@768503|Cytophagia	976|Bacteroidetes	J	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit	rplC	-	-	ko:K02906	ko03010,map03010	M00178,M00179	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_L3
BYD3_k127_7078204_46	1237149.C900_01037	6.429e-90	301.0	COG0088@1|root,COG0088@2|Bacteria,4NEWZ@976|Bacteroidetes,47J8V@768503|Cytophagia	976|Bacteroidetes	J	Forms part of the polypeptide exit tunnel	rplD	GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904	-	ko:K02926	ko03010,map03010	M00178	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_L4
BYD3_k127_7078204_85	1237149.C900_01038	3.549e-39	147.0	COG0089@1|root,COG0089@2|Bacteria,4NS7H@976|Bacteroidetes,47R4F@768503|Cytophagia	976|Bacteroidetes	J	One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome	rplW	-	-	ko:K02892	ko03010,map03010	M00178,M00179	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_L23
BYD3_k127_7078204_23	1120965.AUBV01000003_gene558	9.836e-130	418.0	COG0090@1|root,COG0090@2|Bacteria,4NE8G@976|Bacteroidetes,47JS0@768503|Cytophagia	976|Bacteroidetes	J	One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity	rplB	GO:0002181,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904	-	ko:K02886	ko03010,map03010	M00178,M00179	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_L2,Ribosomal_L2_C
BYD3_k127_7078204_84	153721.MYP_1332	2.141e-41	153.0	COG0185@1|root,COG0185@2|Bacteria,4NQ8T@976|Bacteroidetes,47QCA@768503|Cytophagia	976|Bacteroidetes	J	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA	rpsS	GO:0000028,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006996,GO:0008150,GO:0009987,GO:0015935,GO:0016043,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0042254,GO:0042255,GO:0042274,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043933,GO:0044085,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071826,GO:0071840,GO:1990904	-	ko:K02965	ko03010,map03010	M00178,M00179	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_S19
BYD3_k127_7078204_76	1237149.C900_01041	5.746e-51	184.0	COG0091@1|root,COG0091@2|Bacteria,4NQ8E@976|Bacteroidetes,47QFH@768503|Cytophagia	976|Bacteroidetes	J	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome	rplV	GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904	-	ko:K02890	ko03010,map03010	M00178,M00179	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_L22
BYD3_k127_7078204_26	761193.Runsl_1695	2.113e-123	400.0	COG0092@1|root,COG0092@2|Bacteria,4NE9F@976|Bacteroidetes,47MFE@768503|Cytophagia	976|Bacteroidetes	J	Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation	rpsC	GO:0002181,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904	-	ko:K02982	ko03010,map03010	M00178,M00179	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	KH_2,Ribosomal_S3_C
BYD3_k127_7078204_56	1237149.C900_01043	4.212e-71	242.0	COG0197@1|root,COG0197@2|Bacteria,4NM87@976|Bacteroidetes,47P74@768503|Cytophagia	976|Bacteroidetes	J	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs	rplP	GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0097159,GO:1901363,GO:1990904	-	ko:K02878	ko03010,map03010	M00178	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_L16
BYD3_k127_7078204_101	1237149.C900_01044	4.671e-16	80.0	COG0255@1|root,COG0255@2|Bacteria,4NUSC@976|Bacteroidetes,47S5W@768503|Cytophagia	976|Bacteroidetes	J	Belongs to the universal ribosomal protein uL29 family	rpmC	GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904	-	ko:K02904	ko03010,map03010	M00178,M00179	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_L29
BYD3_k127_7078204_88	1089547.KB913013_gene2127	1.39e-38	145.0	COG0186@1|root,COG0186@2|Bacteria,4NSB2@976|Bacteroidetes,47R6N@768503|Cytophagia	976|Bacteroidetes	J	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA	rpsQ	GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904	-	ko:K02961	ko03010,map03010	M00178,M00179	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_S17
BYD3_k127_7078204_68	1279009.ADICEAN_00782	2.622e-60	209.0	COG0093@1|root,COG0093@2|Bacteria,4NNM6@976|Bacteroidetes,47PQH@768503|Cytophagia	976|Bacteroidetes	J	Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome	rplN	GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0070180,GO:0097159,GO:1901363,GO:1990904	-	ko:K02874	ko03010,map03010	M00178,M00179	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_L14
BYD3_k127_7078204_83	1237149.C900_01047	3.865e-42	159.0	COG0198@1|root,COG0198@2|Bacteria,4NSTI@976|Bacteroidetes,47R7A@768503|Cytophagia	976|Bacteroidetes	J	One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit	rplX	GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904	-	ko:K02895	ko03010,map03010	M00178,M00179	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	KOW,ribosomal_L24
BYD3_k127_7078204_37	1237149.C900_01048	8.079e-97	318.0	COG0094@1|root,COG0094@2|Bacteria,4NEGY@976|Bacteroidetes,47KSN@768503|Cytophagia	976|Bacteroidetes	J	This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits	rplE	GO:0000027,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904	-	ko:K02931	ko03010,map03010	M00178,M00179	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_L5,Ribosomal_L5_C
BYD3_k127_7078204_91	1237149.C900_01049	5.545e-36	138.0	COG0199@1|root,COG0199@2|Bacteria,4NQ6N@976|Bacteroidetes,47QB0@768503|Cytophagia	976|Bacteroidetes	J	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site	rpsN	GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904	-	ko:K02954	ko03010,map03010	M00178,M00179	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_S14
BYD3_k127_7078204_62	1124780.ANNU01000035_gene229	9.1e-65	224.0	COG0096@1|root,COG0096@2|Bacteria,4NNFW@976|Bacteroidetes,47PPU@768503|Cytophagia	976|Bacteroidetes	J	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit	rpsH	GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015935,GO:0022626,GO:0022627,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904	-	ko:K02994	ko03010,map03010	M00178,M00179	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_S8
BYD3_k127_7078204_52	1237149.C900_01051	6.178e-76	259.0	COG0097@1|root,COG0097@2|Bacteria,4NGJM@976|Bacteroidetes,47PER@768503|Cytophagia	976|Bacteroidetes	J	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center	rplF	GO:0002181,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904	-	ko:K02933	ko03010,map03010	M00178,M00179	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_L6
BYD3_k127_7078204_81	1120965.AUBV01000003_gene571	1.502e-42	158.0	COG0256@1|root,COG0256@2|Bacteria,4NQAS@976|Bacteroidetes,47RC9@768503|Cytophagia	976|Bacteroidetes	J	This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance	rplR	GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0008097,GO:0015934,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0097159,GO:1901363,GO:1990904	-	ko:K02881	ko03010,map03010	M00178,M00179	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_L18p
BYD3_k127_7078204_43	1237149.C900_01053	3.858e-93	307.0	COG0098@1|root,COG0098@2|Bacteria,4NG1Z@976|Bacteroidetes,47M7G@768503|Cytophagia	976|Bacteroidetes	J	Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body	rpsE	GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904	-	ko:K02988	ko03010,map03010	M00178,M00179	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_S5,Ribosomal_S5_C
BYD3_k127_7078204_100	153721.MYP_1346	2.073e-16	80.0	COG1841@1|root,COG1841@2|Bacteria,4NUXV@976|Bacteroidetes,47S6M@768503|Cytophagia	976|Bacteroidetes	J	Ribosomal protein L30	rpmD	GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904	-	ko:K02907	ko03010,map03010	M00178,M00179	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_L30
BYD3_k127_7078204_75	926556.Echvi_0236	1.305e-52	189.0	COG0200@1|root,COG0200@2|Bacteria,4NNFQ@976|Bacteroidetes,47PP0@768503|Cytophagia	976|Bacteroidetes	J	Binds to the 23S rRNA	rplO	GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904	-	ko:K02876	ko03010,map03010	M00178,M00179	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_L27A
BYD3_k127_7078204_8	1237149.C900_01056	2.483e-206	649.0	COG0201@1|root,COG0201@2|Bacteria,4NEPU@976|Bacteroidetes,47JRD@768503|Cytophagia	976|Bacteroidetes	U	The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently	secY	-	-	ko:K03076	ko02024,ko03060,ko03070,map02024,map03060,map03070	M00335	-	-	ko00000,ko00001,ko00002,ko02044	3.A.5	-	-	SecY
BYD3_k127_7078204_27	1237149.C900_01057	7.963e-120	389.0	COG0024@1|root,COG0024@2|Bacteria,4NERQ@976|Bacteroidetes,47KDT@768503|Cytophagia	976|Bacteroidetes	E	TIGRFAM methionine aminopeptidase, type I	map	-	3.4.11.18	ko:K01265	-	-	-	-	ko00000,ko01000,ko01002	-	-	-	Peptidase_M24
BYD3_k127_7078204_90	1237149.C900_01058	3.905e-36	137.0	COG0361@1|root,COG0361@2|Bacteria,4NS6S@976|Bacteroidetes,47RFD@768503|Cytophagia	976|Bacteroidetes	J	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex	infA	GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0043021,GO:0043022,GO:0044424,GO:0044444,GO:0044464,GO:0044877	-	ko:K02518	-	-	-	-	ko00000,ko03012	-	-	-	eIF-1a
BYD3_k127_7078204_102	1279009.ADICEAN_00769	5.421e-15	75.0	COG0257@1|root,COG0257@2|Bacteria,4NXGE@976|Bacteroidetes,47SMT@768503|Cytophagia	976|Bacteroidetes	J	Belongs to the bacterial ribosomal protein bL36 family	rpmJ	-	-	ko:K02919	ko03010,map03010	M00178	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_L36
BYD3_k127_7078204_71	1120965.AUBV01000003_gene578	5.965e-60	209.0	COG0099@1|root,COG0099@2|Bacteria,4NNGZ@976|Bacteroidetes,47PRH@768503|Cytophagia	976|Bacteroidetes	J	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits	rpsM	GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022613,GO:0032991,GO:0034641,GO:0034645,GO:0042254,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:0071840,GO:1901564,GO:1901566,GO:1901576,GO:1990904	-	ko:K02952	ko03010,map03010	M00178,M00179	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_S13
BYD3_k127_7078204_59	1237149.C900_01061	6.731e-67	229.0	COG0100@1|root,COG0100@2|Bacteria,4NNHA@976|Bacteroidetes,47Q07@768503|Cytophagia	976|Bacteroidetes	J	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome	rpsK	GO:0000028,GO:0000462,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006139,GO:0006364,GO:0006396,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0016070,GO:0016072,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0030490,GO:0032991,GO:0034470,GO:0034622,GO:0034641,GO:0034645,GO:0034660,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046483,GO:0048027,GO:0065003,GO:0070181,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904	-	ko:K02948	ko03010,map03010	M00178,M00179	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_S11
BYD3_k127_7078204_40	388413.ALPR1_19493	9.525e-96	316.0	COG0522@1|root,COG0522@2|Bacteria,4NEMZ@976|Bacteroidetes,47K3X@768503|Cytophagia	976|Bacteroidetes	J	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit	rpsD	GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006417,GO:0006450,GO:0008150,GO:0009889,GO:0009891,GO:0009893,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010608,GO:0010628,GO:0015935,GO:0019222,GO:0019843,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0032268,GO:0032270,GO:0032991,GO:0034248,GO:0034250,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0045727,GO:0045903,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051171,GO:0051173,GO:0051246,GO:0051247,GO:0060255,GO:0065007,GO:0065008,GO:0080090,GO:0097159,GO:1901363,GO:1990904,GO:2000112	-	ko:K02986	ko03010,map03010	M00178,M00179	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_S4,S4
BYD3_k127_7078204_12	1237149.C900_01063	3.5e-185	582.0	COG0202@1|root,COG0202@2|Bacteria,4NE8W@976|Bacteroidetes,47JD5@768503|Cytophagia	976|Bacteroidetes	K	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates	rpoA	GO:0003674,GO:0003824,GO:0003899,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006351,GO:0006354,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0032774,GO:0034062,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0097659,GO:0097747,GO:0140098,GO:1901360,GO:1901362,GO:1901576	2.7.7.6	ko:K03040	ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020	M00183	R00435,R00441,R00442,R00443	RC02795	br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400	-	-	-	RNA_pol_A_CTD,RNA_pol_A_bac,RNA_pol_L
BYD3_k127_7078204_67	1239962.C943_00483	2.383e-60	213.0	COG0203@1|root,COG0203@2|Bacteria,4NNW0@976|Bacteroidetes,47PPE@768503|Cytophagia	976|Bacteroidetes	J	Ribosomal protein L17	rplQ	GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904	-	ko:K02879	ko03010,map03010	M00178	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_L17
BYD3_k127_7078204_13	1237149.C900_01065	1.176e-182	576.0	COG0505@1|root,COG0505@2|Bacteria,4NEQI@976|Bacteroidetes,47KT4@768503|Cytophagia	976|Bacteroidetes	F	Belongs to the CarA family	carA	-	6.3.5.5	ko:K01956	ko00240,ko00250,ko01100,map00240,map00250,map01100	M00051	R00256,R00575,R01395,R10948,R10949	RC00002,RC00010,RC00043,RC02750,RC02798,RC03314	ko00000,ko00001,ko00002,ko01000	-	-	-	CPSase_sm_chain,GATase
BYD3_k127_7078204_7	1227739.Hsw_3574	5.014e-223	696.0	COG0148@1|root,COG0148@2|Bacteria,4NF5M@976|Bacteroidetes,47MI4@768503|Cytophagia	976|Bacteroidetes	G	Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis	eno	-	4.2.1.11	ko:K01689	ko00010,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko03018,ko04066,map00010,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map03018,map04066	M00001,M00002,M00003,M00346,M00394	R00658	RC00349	ko00000,ko00001,ko00002,ko01000,ko03019,ko04147	-	-	-	Enolase_C,Enolase_N
BYD3_k127_7078204_96	643867.Ftrac_3062	1.794e-27	113.0	COG2919@1|root,COG2919@2|Bacteria,4P9WW@976|Bacteroidetes,47S83@768503|Cytophagia	976|Bacteroidetes	D	Septum formation initiator	-	-	-	-	-	-	-	-	-	-	-	-	DivIC
BYD3_k127_7078204_99	388413.ALPR1_19458	6.92e-20	96.0	COG2067@1|root,COG2067@2|Bacteria,4PMEK@976|Bacteroidetes	976|Bacteroidetes	I	long-chain fatty acid transport protein	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_7078204_17	700598.Niako_5052	1.361e-168	535.0	COG2055@1|root,COG2055@2|Bacteria,4NGVC@976|Bacteroidetes,1INRW@117747|Sphingobacteriia	976|Bacteroidetes	C	Belongs to the LDH2 MDH2 oxidoreductase family	-	-	-	-	-	-	-	-	-	-	-	-	Ldh_2
BYD3_k127_7078204_42	1237149.C900_01070	2.587e-95	321.0	COG0248@1|root,COG0248@2|Bacteria,4NH03@976|Bacteroidetes,47K3H@768503|Cytophagia	976|Bacteroidetes	FP	Ppx GppA phosphatase	-	-	3.6.1.11,3.6.1.40	ko:K01524	ko00230,map00230	-	R03409	RC00002	ko00000,ko00001,ko01000	-	-	-	Ppx-GppA
BYD3_k127_7078204_3	1237149.C900_01071	6.698e-286	885.0	COG4799@1|root,COG4799@2|Bacteria,4NEMJ@976|Bacteroidetes,47K3E@768503|Cytophagia	976|Bacteroidetes	I	Acetyl-CoA carboxylase carboxyltransferase component (subunits alpha and beta)	pccB	-	2.1.3.15,6.4.1.3	ko:K01966	ko00280,ko00630,ko00640,ko01100,ko01120,ko01130,ko01200,map00280,map00630,map00640,map01100,map01120,map01130,map01200	M00373,M00741	R01859	RC00097,RC00609	ko00000,ko00001,ko00002,ko01000	-	-	-	Carboxyl_trans
BYD3_k127_7078204_14	1237149.C900_01074	6.72e-181	571.0	COG1363@1|root,COG1363@2|Bacteria,4NG97@976|Bacteroidetes,47MIG@768503|Cytophagia	976|Bacteroidetes	G	PFAM M42 glutamyl aminopeptidase	frvX	-	-	-	-	-	-	-	-	-	-	-	Peptidase_M42
BYD3_k127_7078204_72	1237149.C900_01077	2.099e-59	210.0	COG0642@1|root,COG2205@2|Bacteria,4NX2D@976|Bacteroidetes,47T5N@768503|Cytophagia	976|Bacteroidetes	T	Domain of unknown function (DUF4154)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4154
BYD3_k127_7078204_77	1237149.C900_01075	4.288e-49	180.0	COG0642@1|root,COG2205@2|Bacteria,4NX2D@976|Bacteroidetes,47T5N@768503|Cytophagia	976|Bacteroidetes	T	Domain of unknown function (DUF4154)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4154
BYD3_k127_7078204_47	1279009.ADICEAN_04083	3.038e-86	292.0	COG0614@1|root,COG0614@2|Bacteria,4NI2Y@976|Bacteroidetes,47M03@768503|Cytophagia	976|Bacteroidetes	P	Periplasmic binding protein	fecB	-	-	-	-	-	-	-	-	-	-	-	Peripla_BP_2
BYD3_k127_7078204_21	1124780.ANNU01000017_gene1909	9.121e-137	447.0	COG0128@1|root,COG0128@2|Bacteria,4NE8T@976|Bacteroidetes,47K1U@768503|Cytophagia	976|Bacteroidetes	E	Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate	aroA	-	2.5.1.19	ko:K00800	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	M00022	R03460	RC00350	ko00000,ko00001,ko00002,ko01000	-	-	-	EPSP_synthase
BYD3_k127_7078204_30	1237149.C900_01081	2.056e-110	366.0	COG0337@1|root,COG0337@2|Bacteria,4NGSS@976|Bacteroidetes,47JBE@768503|Cytophagia	976|Bacteroidetes	E	Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)	aroB	-	4.2.3.4	ko:K01735	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	M00022	R03083	RC00847	ko00000,ko00001,ko00002,ko01000	-	-	-	DHQ_synthase
BYD3_k127_7078204_18	1237149.C900_01083	1.066e-160	514.0	COG0506@1|root,COG0506@2|Bacteria,4NEH5@976|Bacteroidetes,47KMP@768503|Cytophagia	976|Bacteroidetes	E	PFAM Proline dehydrogenase	putA	-	-	ko:K00318	ko00330,ko01100,ko01110,ko01130,map00330,map01100,map01110,map01130	-	R10507	RC00083	ko00000,ko00001,ko01000	-	-	-	Pro_dh
BYD3_k127_7078204_0	1237149.C900_01087	5.802e-308	951.0	COG1190@1|root,COG1190@2|Bacteria,4NDZN@976|Bacteroidetes,47M2W@768503|Cytophagia	976|Bacteroidetes	J	Belongs to the class-II aminoacyl-tRNA synthetase family	lysS	-	6.1.1.6	ko:K04567	ko00970,map00970	M00359,M00360	R03658	RC00055,RC00523	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	-	-	-	DUF4332,tRNA-synt_2,tRNA_anti-codon
BYD3_k127_7078204_2	1237149.C900_01088	1.754e-294	931.0	COG1452@1|root,COG1452@2|Bacteria,4NFWD@976|Bacteroidetes,47JIS@768503|Cytophagia	976|Bacteroidetes	M	Organic solvent tolerance protein OstA	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_7078204_32	1237149.C900_01089	4.38e-104	346.0	COG0860@1|root,COG0860@2|Bacteria,4NGKC@976|Bacteroidetes,47M2P@768503|Cytophagia	976|Bacteroidetes	M	N-acetylmuramoyl-L-alanine amidase	amiA	-	3.5.1.28	ko:K01448	ko01503,map01503	M00727	R04112	RC00064,RC00141	ko00000,ko00001,ko00002,ko01000,ko01011,ko03036	-	-	-	Amidase_3
BYD3_k127_7078204_49	1237149.C900_01090	4.325e-81	280.0	COG1463@1|root,COG1463@2|Bacteria,4NHT9@976|Bacteroidetes,47MMF@768503|Cytophagia	976|Bacteroidetes	Q	Mammalian cell entry related domain protein	-	-	-	ko:K02067	ko02010,map02010	M00210,M00669,M00670	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.27	-	-	MlaD
BYD3_k127_7078204_1	1237149.C900_01092	8.228e-298	919.0	COG4799@1|root,COG4799@2|Bacteria,4NEMJ@976|Bacteroidetes,47JYJ@768503|Cytophagia	976|Bacteroidetes	I	Acetyl-CoA carboxylase carboxyltransferase component (subunits alpha and beta)	accD5	-	-	-	-	-	-	-	-	-	-	-	Carboxyl_trans
BYD3_k127_7078204_22	1237149.C900_01093	1.322e-132	428.0	COG2912@1|root,COG2912@2|Bacteria,4NF8R@976|Bacteroidetes,47JJ3@768503|Cytophagia	976|Bacteroidetes	S	Transglutaminase-like superfamily	-	-	-	-	-	-	-	-	-	-	-	-	Transglut_core2
BYD3_k127_7078204_11	1237149.C900_05585	7.758e-186	597.0	COG2885@1|root,COG2885@2|Bacteria,4NEND@976|Bacteroidetes,47MW3@768503|Cytophagia	976|Bacteroidetes	M	Belongs to the ompA family	-	-	-	-	-	-	-	-	-	-	-	-	CarboxypepD_reg,OmpA,PD40,RicinB_lectin_2
BYD3_k127_7078204_86	1406840.Q763_04430	4.816e-39	153.0	COG4929@1|root,COG4929@2|Bacteria,4NQB4@976|Bacteroidetes,1I3Q6@117743|Flavobacteriia,2NZ2B@237|Flavobacterium	976|Bacteroidetes	S	GDYXXLXY protein	-	-	-	-	-	-	-	-	-	-	-	-	GDYXXLXY
BYD3_k127_7078204_28	927658.AJUM01000024_gene2500	1.471e-115	386.0	COG4872@1|root,COG4872@2|Bacteria,4NIK7@976|Bacteroidetes	976|Bacteroidetes	S	Predicted membrane protein (DUF2157)	-	-	-	-	-	-	-	-	-	-	-	-	DUF2157
BYD3_k127_7078204_57	153721.MYP_1844	2.217e-70	250.0	COG3386@1|root,COG3386@2|Bacteria,4NJKD@976|Bacteroidetes,47PXA@768503|Cytophagia	976|Bacteroidetes	G	amine dehydrogenase activity	-	-	-	-	-	-	-	-	-	-	-	-	SGL
BYD3_k127_7078204_94	762903.Pedsa_2858	1.126e-31	129.0	29AZZ@1|root,2ZXYX@2|Bacteria,4NP6M@976|Bacteroidetes,1ITA8@117747|Sphingobacteriia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_7078204_87	1237149.C900_00245	1.248e-38	151.0	COG0526@1|root,COG0526@2|Bacteria,4NSUU@976|Bacteroidetes,47R9W@768503|Cytophagia	976|Bacteroidetes	CO	AhpC/TSA family	-	-	-	-	-	-	-	-	-	-	-	-	AhpC-TSA,Redoxin
BYD3_k127_7078204_92	1124780.ANNU01000030_gene1161	1.56e-35	143.0	COG2091@1|root,COG2091@2|Bacteria,4NSBI@976|Bacteroidetes,47RPQ@768503|Cytophagia	976|Bacteroidetes	H	Belongs to the P-Pant transferase superfamily	sfp	-	-	-	-	-	-	-	-	-	-	-	ACPS
BYD3_k127_7078204_29	1237149.C900_00243	5.799e-113	373.0	COG2319@1|root,COG2319@2|Bacteria,4NH20@976|Bacteroidetes,47JUN@768503|Cytophagia	976|Bacteroidetes	S	PFAM WD domain, G-beta repeat	-	-	-	-	-	-	-	-	-	-	-	-	WD40
BYD3_k127_7078204_61	1237149.C900_00242	8.044e-65	229.0	COG3599@1|root,COG3599@2|Bacteria,4NQDF@976|Bacteroidetes,47QRC@768503|Cytophagia	976|Bacteroidetes	D	TIGRFAM DivIVA domain	divIVA	-	-	ko:K04074	-	-	-	-	ko00000,ko03036	-	-	-	DivIVA
BYD3_k127_7078204_93	1237149.C900_00241	1.971e-34	135.0	COG1539@1|root,COG1539@2|Bacteria,4NQ53@976|Bacteroidetes,47QM5@768503|Cytophagia	976|Bacteroidetes	H	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin	folB	-	1.13.11.81,4.1.2.25,5.1.99.8	ko:K01633	ko00790,ko01100,map00790,map01100	M00126,M00840	R03504,R11037,R11073	RC00721,RC00943,RC01479,RC03333,RC03334	ko00000,ko00001,ko00002,ko01000	-	-	-	FolB
BYD3_k127_7078204_70	1237149.C900_05758	5.148e-60	212.0	28NWP@1|root,2ZBUH@2|Bacteria,4NNPT@976|Bacteroidetes,47M02@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_7078204_97	1237149.C900_05757	2.717e-26	115.0	COG3339@1|root,COG3339@2|Bacteria,4NVFR@976|Bacteroidetes,47RD8@768503|Cytophagia	976|Bacteroidetes	S	Protein of unknown function (DUF1232)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1232
BYD3_k127_7078204_65	1237149.C900_05756	2.58e-62	221.0	COG0702@1|root,COG0702@2|Bacteria,4NG89@976|Bacteroidetes,47PTQ@768503|Cytophagia	976|Bacteroidetes	GM	epimerase	-	-	-	-	-	-	-	-	-	-	-	-	Epimerase,NAD_binding_10
BYD3_k127_7078204_69	926559.JoomaDRAFT_2003	2.894e-60	211.0	COG1490@1|root,COG1490@2|Bacteria,4NNFF@976|Bacteroidetes,1I1XN@117743|Flavobacteriia	976|Bacteroidetes	J	rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality	dtd	GO:0002161,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006399,GO:0006450,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016070,GO:0016787,GO:0016788,GO:0034641,GO:0034660,GO:0043170,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0051499,GO:0051500,GO:0052689,GO:0065007,GO:0065008,GO:0071704,GO:0090304,GO:0106074,GO:0140098,GO:0140101,GO:1901360	-	ko:K07560	-	-	-	-	ko00000,ko01000,ko03016	-	-	-	Tyr_Deacylase
BYD3_k127_7078204_63	1123400.KB904761_gene2508	1.176e-64	226.0	COG2110@1|root,COG2110@2|Bacteria,1RCWP@1224|Proteobacteria,1S3WJ@1236|Gammaproteobacteria	1236|Gammaproteobacteria	S	Deacetylates O-acetyl-ADP ribose. Down-regulates ribonuclease 3 (RNase III) activity. Acts by interacting directly with the region of the ribonuclease that is required for dimerization activation	ymdB	GO:0003674,GO:0003824,GO:0004857,GO:0005488,GO:0005515,GO:0008150,GO:0008428,GO:0009892,GO:0010605,GO:0016787,GO:0019213,GO:0019219,GO:0019222,GO:0019899,GO:0030234,GO:0031323,GO:0031324,GO:0032069,GO:0032074,GO:0043086,GO:0043900,GO:0044092,GO:0045934,GO:0048519,GO:0048523,GO:0050789,GO:0050790,GO:0050794,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0051336,GO:0051346,GO:0060255,GO:0060698,GO:0060699,GO:0060700,GO:0060701,GO:0060702,GO:0061463,GO:0065007,GO:0065009,GO:0080090,GO:0098772,GO:1900190,GO:1900231	-	-	-	-	-	-	-	-	-	-	Macro
BYD3_k127_7078204_55	509635.N824_11440	1.351e-71	248.0	COG2173@1|root,COG2173@2|Bacteria,4NE2K@976|Bacteroidetes,1IS0X@117747|Sphingobacteriia	976|Bacteroidetes	M	Catalyzes hydrolysis of the D-alanyl-D-alanine dipeptide	vanX	-	3.4.13.22	ko:K08641	ko01502,ko02020,map01502,map02020	M00651	-	-	ko00000,ko00001,ko00002,ko01000,ko01002,ko01011,ko01504	-	-	-	Peptidase_M15
BYD3_k127_7078204_41	1123248.KB893326_gene1452	1.752e-95	323.0	COG1082@1|root,COG1082@2|Bacteria,4NFMD@976|Bacteroidetes,1IVV3@117747|Sphingobacteriia	976|Bacteroidetes	G	Xylose isomerase-like TIM barrel	-	-	-	-	-	-	-	-	-	-	-	-	AP_endonuc_2
BYD3_k127_7078204_16	929703.KE386491_gene3360	2.519e-170	543.0	COG0119@1|root,COG0119@2|Bacteria,4NEIT@976|Bacteroidetes,47N2Y@768503|Cytophagia	976|Bacteroidetes	E	Belongs to the alpha-IPM synthase homocitrate synthase family	leuA	-	2.3.3.13	ko:K01649	ko00290,ko00620,ko01100,ko01110,ko01210,ko01230,map00290,map00620,map01100,map01110,map01210,map01230	M00432	R01213	RC00004,RC00470,RC02754	br01601,ko00000,ko00001,ko00002,ko01000	-	-	-	HMGL-like,LeuA_dimer
BYD3_k127_7078204_15	1434325.AZQN01000005_gene3519	6.561e-178	562.0	COG0473@1|root,COG0473@2|Bacteria,4NEBE@976|Bacteroidetes,47MDN@768503|Cytophagia	976|Bacteroidetes	CE	Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate	leuB	-	1.1.1.85	ko:K00052	ko00290,ko00660,ko01100,ko01110,ko01210,ko01230,map00290,map00660,map01100,map01110,map01210,map01230	M00432,M00535	R00994,R04426,R10052	RC00084,RC00417,RC03036	br01601,ko00000,ko00001,ko00002,ko01000	-	-	-	Iso_dh
BYD3_k127_7078204_48	1121930.AQXG01000004_gene2960	3.646e-86	288.0	COG0066@1|root,COG0066@2|Bacteria,4NDVY@976|Bacteroidetes,1IQ0S@117747|Sphingobacteriia	976|Bacteroidetes	E	Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate	leuD	-	4.2.1.33,4.2.1.35	ko:K01704	ko00290,ko00660,ko01100,ko01110,ko01210,ko01230,map00290,map00660,map01100,map01110,map01210,map01230	M00432,M00535	R03896,R03898,R03968,R04001,R10170	RC00976,RC00977,RC01041,RC01046,RC03072	br01601,ko00000,ko00001,ko00002,ko01000	-	-	-	Aconitase_C
BYD3_k127_7078204_5	1185876.BN8_06126	3.701e-248	771.0	COG0065@1|root,COG0065@2|Bacteria,4NG7E@976|Bacteroidetes,47JAE@768503|Cytophagia	976|Bacteroidetes	E	Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate	leuC	-	4.2.1.33,4.2.1.35	ko:K01703	ko00290,ko00660,ko00966,ko01100,ko01110,ko01210,ko01230,map00290,map00660,map00966,map01100,map01110,map01210,map01230	M00432,M00535	R03896,R03898,R03968,R04001,R08620,R08624,R08628,R08634,R08641,R08645,R10170	RC00497,RC00976,RC00977,RC01041,RC01046,RC03072	br01601,ko00000,ko00001,ko00002,ko01000	-	-	-	Aconitase
BYD3_k127_7078204_79	452637.Oter_1073	5.847e-46	170.0	2C85M@1|root,31BVJ@2|Bacteria,46VVY@74201|Verrucomicrobia,3K9ZS@414999|Opitutae	414999|Opitutae	S	PFAM Stress responsive alpha-beta barrel domain protein	-	-	-	-	-	-	-	-	-	-	-	-	Dabb
BYD3_k127_7078204_33	1519464.HY22_00050	2.606e-103	346.0	COG0604@1|root,COG0604@2|Bacteria	2|Bacteria	C	NADPH:quinone reductase activity	-	-	-	-	-	-	-	-	-	-	-	-	ADH_N,ADH_zinc_N
BYD3_k127_7078204_25	700598.Niako_5818	1.113e-128	420.0	COG0115@1|root,COG0115@2|Bacteria,4NEJY@976|Bacteroidetes,1IP2X@117747|Sphingobacteriia	976|Bacteroidetes	EH	Branched-chain amino acid aminotransferase	ilvE	-	2.6.1.42	ko:K00826	ko00270,ko00280,ko00290,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00270,map00280,map00290,map00770,map01100,map01110,map01130,map01210,map01230	M00019,M00036,M00119,M00570	R01090,R01214,R02199,R10991	RC00006,RC00036	ko00000,ko00001,ko00002,ko01000,ko01007	-	-	-	Aminotran_4
BYD3_k127_7078204_20	536232.CLM_0291	4.686e-153	500.0	COG0076@1|root,COG0076@2|Bacteria,1TSK0@1239|Firmicutes,24A90@186801|Clostridia,36MN9@31979|Clostridiaceae	186801|Clostridia	E	Pyridoxal-dependent decarboxylase conserved domain	-	-	4.1.1.15	ko:K01580	ko00250,ko00410,ko00430,ko00650,ko01100,ko01110,ko01120,ko02024,ko04727,ko04940,map00250,map00410,map00430,map00650,map01100,map01110,map01120,map02024,map04727,map04940	M00027	R00261,R00489,R01682,R02466	RC00299	ko00000,ko00001,ko00002,ko01000	-	-	-	Pyridoxal_deC
BYD3_k127_7078204_51	1237149.C900_01128	2.859e-76	260.0	COG0693@1|root,COG0693@2|Bacteria	2|Bacteria	S	protein deglycation	-	-	-	-	-	-	-	-	-	-	-	-	DJ-1_PfpI
BYD3_k127_7078204_60	1131812.JQMS01000001_gene177	6.466e-65	228.0	COG2808@1|root,COG2808@2|Bacteria,4NINW@976|Bacteroidetes,1HZF0@117743|Flavobacteriia,2NSF7@237|Flavobacterium	976|Bacteroidetes	K	Putative FMN-binding domain	paiB	-	-	ko:K07734	-	-	-	-	ko00000,ko03000	-	-	-	FMN_bind_2
BYD3_k127_7078204_95	485918.Cpin_2467	2.526e-30	126.0	COG2318@1|root,COG2318@2|Bacteria,4NU20@976|Bacteroidetes	976|Bacteroidetes	S	DinB family	-	-	-	-	-	-	-	-	-	-	-	-	DinB_2
BYD3_k127_7078204_64	1185876.BN8_01556	2.229e-62	218.0	COG1764@1|root,COG1764@2|Bacteria,4NNF7@976|Bacteroidetes,47QD5@768503|Cytophagia	976|Bacteroidetes	O	redox protein regulator of disulfide bond formation	-	-	-	-	-	-	-	-	-	-	-	-	OsmC
BYD3_k127_7078204_80	700598.Niako_1585	1.814e-44	168.0	COG0454@1|root,COG0456@2|Bacteria,4NP1E@976|Bacteroidetes	976|Bacteroidetes	K	(GNAT) family	-	-	2.3.1.57	ko:K22441	-	-	-	-	ko00000,ko01000	-	-	-	Acetyltransf_1,Acetyltransf_10
BYD3_k127_7078204_82	929556.Solca_2555	2.344e-42	160.0	COG0454@1|root,COG0456@2|Bacteria,4NHRI@976|Bacteroidetes,1IXS2@117747|Sphingobacteriia	976|Bacteroidetes	K	Acetyltransferase (GNAT) domain	-	-	-	-	-	-	-	-	-	-	-	-	Acetyltransf_1
BYD3_k127_7078204_89	491952.Mar181_1350	1.443e-38	149.0	COG1917@1|root,COG1917@2|Bacteria,1RGXQ@1224|Proteobacteria,1S6BE@1236|Gammaproteobacteria	1236|Gammaproteobacteria	S	Cupin 2, conserved barrel domain protein	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_7078204_54	743722.Sph21_3791	9.512e-72	252.0	COG0697@1|root,COG0697@2|Bacteria,4NGJR@976|Bacteroidetes,1ISX8@117747|Sphingobacteriia	976|Bacteroidetes	EG	metabolite transporter	-	-	-	-	-	-	-	-	-	-	-	-	EamA
BYD3_k127_7078204_73	1237149.C900_01350	8.631e-58	211.0	COG2992@1|root,COG2992@2|Bacteria	2|Bacteria	S	amidase activity	bax	-	-	ko:K03796	-	-	-	-	ko00000	-	GH73	-	Glucosaminidase
BYD3_k127_7078204_66	1237149.C900_00374	1.125e-60	226.0	COG2202@1|root,COG4251@1|root,COG2202@2|Bacteria,COG4251@2|Bacteria	2|Bacteria	T	photoreceptor activity	-	-	-	-	-	-	-	-	-	-	-	-	HATPase_c,HisKA,PAS,PAS_3,PAS_9,Reg_prop,Response_reg,STAS,Y_Y_Y
BYD3_k127_7078204_50	1123057.P872_13075	1.39e-77	265.0	COG4122@1|root,COG4122@2|Bacteria,4PBU1@976|Bacteroidetes,47WBZ@768503|Cytophagia	976|Bacteroidetes	S	O-methyltransferase	-	-	-	-	-	-	-	-	-	-	-	-	Methyltransf_3
BYD3_k127_7078204_24	1121481.AUAS01000004_gene1528	1.657e-129	439.0	COG1289@1|root,COG1289@2|Bacteria,4NG4J@976|Bacteroidetes,47NEX@768503|Cytophagia	976|Bacteroidetes	S	FUSC-like inner membrane protein yccS	yccS	-	-	-	-	-	-	-	-	-	-	-	FUSC,FUSC-like,FUSC_2
BYD3_k127_7078204_19	1237149.C900_00082	8.403e-154	498.0	COG2204@1|root,COG2204@2|Bacteria,4NE89@976|Bacteroidetes,47JF9@768503|Cytophagia	976|Bacteroidetes	T	two component, sigma54 specific, transcriptional regulator, Fis family	-	-	-	-	-	-	-	-	-	-	-	-	HTH_8,Response_reg,Sigma54_activat
BYD3_k127_7078204_53	1121904.ARBP01000012_gene1248	5.281e-74	267.0	COG5000@1|root,COG5000@2|Bacteria,4NEWF@976|Bacteroidetes,47JZG@768503|Cytophagia	976|Bacteroidetes	T	Histidine kinase	-	-	-	-	-	-	-	-	-	-	-	-	HATPase_c
BYD3_k127_7078204_38	1123277.KB893172_gene574	1.296e-96	346.0	COG0577@1|root,COG0577@2|Bacteria,4NDUK@976|Bacteroidetes,47NTJ@768503|Cytophagia	976|Bacteroidetes	V	MacB-like periplasmic core domain	-	-	-	ko:K02004	-	M00258	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	FtsX,MacB_PCD
BYD3_k127_7078204_39	1237149.C900_01563	4.298e-96	346.0	COG0577@1|root,COG0577@2|Bacteria,4NDUK@976|Bacteroidetes,47NTJ@768503|Cytophagia	976|Bacteroidetes	V	MacB-like periplasmic core domain	-	-	-	ko:K02004	-	M00258	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	FtsX,MacB_PCD
BYD3_k127_7078204_98	1237149.C900_01724	1.531e-20	96.0	COG0457@1|root,COG0457@2|Bacteria,4NF7U@976|Bacteroidetes,47MJ6@768503|Cytophagia	976|Bacteroidetes	S	Tetratricopeptide repeat protein	-	-	-	-	-	-	-	-	-	-	-	-	TPR_8
BYD3_k127_7089407_0	1123037.AUDE01000005_gene3088	2.41e-189	625.0	COG4191@1|root,COG4191@2|Bacteria,4NEJX@976|Bacteroidetes,1I0JH@117743|Flavobacteriia	976|Bacteroidetes	T	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase	-	-	-	-	-	-	-	-	-	-	-	-	7TMR-DISMED2,7TMR-DISM_7TM,HATPase_c,HisKA,SnoaL_3
BYD3_k127_7089407_2	1223410.KN050846_gene181	6.773e-05	51.0	COG3631@1|root,COG3631@2|Bacteria,4NQGX@976|Bacteroidetes,1I3NE@117743|Flavobacteriia	976|Bacteroidetes	S	SnoaL-like domain	-	-	-	-	-	-	-	-	-	-	-	-	SnoaL_2
BYD3_k127_7089407_1	1121481.AUAS01000004_gene1371	1.137e-11	65.0	COG0662@1|root,COG0662@2|Bacteria,4NPEE@976|Bacteroidetes,47Y5F@768503|Cytophagia	976|Bacteroidetes	G	Cupin domain	-	-	-	-	-	-	-	-	-	-	-	-	Cupin_2
BYD3_k127_7136140_4	925409.KI911562_gene533	1.298e-271	840.0	COG1554@1|root,COG1554@2|Bacteria,4NEWW@976|Bacteroidetes,1IPQY@117747|Sphingobacteriia	976|Bacteroidetes	G	Glycosyl hydrolase family 65, N-terminal domain	-	-	3.2.1.51	ko:K15923	ko00511,map00511	-	-	-	ko00000,ko00001,ko01000	-	GH95	-	Glyco_hyd_65N_2
BYD3_k127_7136140_5	1121957.ATVL01000008_gene4456	2.185e-269	838.0	COG3507@1|root,COG3507@2|Bacteria,4NGA5@976|Bacteroidetes,47K5U@768503|Cytophagia	976|Bacteroidetes	G	Belongs to the glycosyl hydrolase 43 family	-	-	3.2.1.37,3.2.1.55	ko:K01198,ko:K01209	ko00520,ko01100,map00520,map01100	-	R01433,R01762	RC00467	ko00000,ko00001,ko01000	-	GH43,GH51	-	Glyco_hydro_43
BYD3_k127_7136140_3	700598.Niako_2438	0.0	1032.0	COG2382@1|root,COG2382@2|Bacteria,4NF50@976|Bacteroidetes,1IPKM@117747|Sphingobacteriia	976|Bacteroidetes	P	COGs COG2382 Enterochelin esterase	-	-	-	ko:K07214	-	-	-	-	ko00000	-	-	-	Esterase,SASA
BYD3_k127_7136140_17	700598.Niako_2620	5.866e-37	146.0	COG1595@1|root,COG1595@2|Bacteria,4NSXH@976|Bacteroidetes,1ITK2@117747|Sphingobacteriia	976|Bacteroidetes	K	PFAM RNA polymerase sigma factor 70, region 4 type 2	-	-	-	ko:K03088	-	-	-	-	ko00000,ko03021	-	-	-	Sigma70_r2,Sigma70_r4_2
BYD3_k127_7136140_15	1227739.Hsw_PA0149	5.053e-46	181.0	COG3712@1|root,COG3712@2|Bacteria,4NSEH@976|Bacteroidetes,47RFI@768503|Cytophagia	976|Bacteroidetes	PT	Domain of unknown function (DUF4974)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4974,FecR
BYD3_k127_7136140_0	760192.Halhy_0721	0.0	1354.0	COG1629@1|root,COG4774@1|root,COG1629@2|Bacteria,COG4774@2|Bacteria,4PKAS@976|Bacteroidetes	976|Bacteroidetes	P	TonB-linked outer membrane protein, SusC RagA family	-	-	-	-	-	-	-	-	-	-	-	-	CarbopepD_reg_2,Plug,TonB_dep_Rec
BYD3_k127_7136140_6	760192.Halhy_0722	5.651e-204	646.0	COG4198@1|root,COG4198@2|Bacteria,4NEAX@976|Bacteroidetes,1IREX@117747|Sphingobacteriia	976|Bacteroidetes	S	Starch-binding associating with outer membrane	-	-	-	-	-	-	-	-	-	-	-	-	SusD-like_2
BYD3_k127_7136140_13	1158294.JOMI01000004_gene3543	1.029e-79	279.0	COG3386@1|root,COG3386@2|Bacteria,4NF4A@976|Bacteroidetes,2FSDK@200643|Bacteroidia	976|Bacteroidetes	G	SMP-30 Gluconolaconase LRE-like	-	-	3.1.1.17	ko:K01053	ko00030,ko00053,ko00930,ko01100,ko01110,ko01120,ko01130,ko01200,ko01220,map00030,map00053,map00930,map01100,map01110,map01120,map01130,map01200,map01220	M00129	R01519,R02933,R03751	RC00537,RC00983	ko00000,ko00001,ko00002,ko01000,ko04147	-	-	-	Pectate_lyase_3,SGL
BYD3_k127_7136140_14	504472.Slin_4803	8.656e-63	220.0	COG2128@1|root,COG2128@2|Bacteria,4P1UG@976|Bacteroidetes	976|Bacteroidetes	S	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_7136140_10	504472.Slin_4802	2.209e-129	417.0	COG1028@1|root,COG1028@2|Bacteria,4P0BZ@976|Bacteroidetes	976|Bacteroidetes	IQ	KR domain	-	-	-	-	-	-	-	-	-	-	-	-	adh_short_C2
BYD3_k127_7136140_8	1123248.KB893330_gene449	6.525e-171	549.0	COG0531@1|root,COG0531@2|Bacteria,4NJPZ@976|Bacteroidetes,1IRQU@117747|Sphingobacteriia	976|Bacteroidetes	E	Amino acid permease	-	-	-	ko:K03294	-	-	-	-	ko00000	2.A.3.2	-	-	AA_permease_2
BYD3_k127_7136140_21	1237149.C900_00153	3.619e-20	95.0	COG0745@1|root,COG0745@2|Bacteria,4NXE8@976|Bacteroidetes,47RYQ@768503|Cytophagia	976|Bacteroidetes	T	cheY-homologous receiver domain	-	-	-	-	-	-	-	-	-	-	-	-	Response_reg
BYD3_k127_7136140_9	926562.Oweho_2065	3.706e-160	517.0	COG0642@1|root,COG3850@1|root,COG2205@2|Bacteria,COG3850@2|Bacteria,4NEIS@976|Bacteroidetes,1HXGB@117743|Flavobacteriia,2PBKD@246874|Cryomorphaceae	976|Bacteroidetes	T	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase	arlS_1	-	-	-	-	-	-	-	-	-	-	-	HAMP,HATPase_c,HisKA
BYD3_k127_7136140_12	926562.Oweho_2064	4.372e-93	310.0	COG0745@1|root,COG0745@2|Bacteria,4NE77@976|Bacteroidetes,1IMIZ@117743|Flavobacteriia	976|Bacteroidetes	T	transcriptional regulator	-	-	-	ko:K07665	ko02020,map02020	M00452,M00745	-	-	ko00000,ko00001,ko00002,ko01504,ko02022	-	-	-	Response_reg,Trans_reg_C
BYD3_k127_7136140_2	1121904.ARBP01000023_gene5047	0.0	1225.0	COG4888@1|root,COG4888@2|Bacteria,4NEE8@976|Bacteroidetes,47JJ5@768503|Cytophagia	976|Bacteroidetes	S	ASPIC and UnbV	-	-	-	-	-	-	-	-	-	-	-	-	UnbV_ASPIC,VCBS
BYD3_k127_7136140_22	641524.ADICYQ_3292	4.1e-16	83.0	299ZC@1|root,2ZX10@2|Bacteria,4P8PU@976|Bacteroidetes,47WGM@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_7136140_7	1121904.ARBP01000023_gene5050	7.11e-203	641.0	COG0446@1|root,COG0446@2|Bacteria,4NI99@976|Bacteroidetes,47TR4@768503|Cytophagia	976|Bacteroidetes	S	SusD family	-	-	-	ko:K21572	-	-	-	-	ko00000,ko02000	8.A.46.1,8.A.46.3	-	-	SusD-like_3,SusD_RagB
BYD3_k127_7136140_1	880070.Cycma_3654	0.0	1282.0	COG1629@1|root,COG1629@2|Bacteria,4NDXS@976|Bacteroidetes,47KCF@768503|Cytophagia	976|Bacteroidetes	P	PFAM TonB-dependent Receptor Plug	-	-	-	-	-	-	-	-	-	-	-	-	CarbopepD_reg_2,Plug,TonB_dep_Rec
BYD3_k127_7136140_16	1121007.AUML01000002_gene1565	1.143e-38	158.0	COG3712@1|root,COG3712@2|Bacteria,4NICU@976|Bacteroidetes,1HZXH@117743|Flavobacteriia,2YGW6@290174|Aquimarina	976|Bacteroidetes	PT	FecR protein	-	-	-	-	-	-	-	-	-	-	-	-	DUF4974,FecR
BYD3_k127_7136140_18	1185876.BN8_00144	1.012e-36	146.0	COG1595@1|root,COG1595@2|Bacteria,4NNBY@976|Bacteroidetes,47PH5@768503|Cytophagia	976|Bacteroidetes	K	RNA polymerase sigma factor, sigma-70 family	-	-	-	ko:K03088	-	-	-	-	ko00000,ko03021	-	-	-	Sigma70_r2,Sigma70_r4_2
BYD3_k127_7136140_20	1443665.JACA01000007_gene100	7.241e-24	115.0	COG2197@1|root,COG2197@2|Bacteria,4PKCU@976|Bacteroidetes,1IKVW@117743|Flavobacteriia,2YKBM@290174|Aquimarina	976|Bacteroidetes	KT	7TMR-DISM extracellular 2	-	-	-	-	-	-	-	-	-	-	-	-	7TMR-DISMED2,7TMR-DISM_7TM
BYD3_k127_7136140_19	1117379.BABA_18562	6.503e-26	120.0	COG2202@1|root,COG4191@1|root,COG2202@2|Bacteria,COG4191@2|Bacteria,1VCNJ@1239|Firmicutes,4HVBX@91061|Bacilli,1ZS41@1386|Bacillus	91061|Bacilli	T	Histidine kinase	-	-	-	-	-	-	-	-	-	-	-	-	HATPase_c,HisKA,MHYT,PAS_9
BYD3_k127_7136140_11	1189612.A33Q_1204	6.686e-103	344.0	COG0385@1|root,COG0385@2|Bacteria,4NEDA@976|Bacteroidetes,47K7V@768503|Cytophagia	976|Bacteroidetes	S	SBF-like CPA transporter family (DUF4137)	-	-	-	ko:K14347	-	-	-	-	ko00000,ko02000,ko04147	2.A.93.1	-	-	SBF_like
BYD3_k127_7150526_2	1123248.KB893359_gene2084	2.028e-223	696.0	COG0673@1|root,COG0673@2|Bacteria,4NG5E@976|Bacteroidetes,1IUTT@117747|Sphingobacteriia	976|Bacteroidetes	S	Oxidoreductase family, C-terminal alpha/beta domain	-	-	-	-	-	-	-	-	-	-	-	-	GFO_IDH_MocA,GFO_IDH_MocA_C
BYD3_k127_7150526_3	1123248.KB893359_gene2085	7.161e-204	638.0	COG1082@1|root,COG1082@2|Bacteria,4NFSP@976|Bacteroidetes,1IW7J@117747|Sphingobacteriia	976|Bacteroidetes	G	Xylose isomerase-like TIM barrel	-	-	-	-	-	-	-	-	-	-	-	-	AP_endonuc_2
BYD3_k127_7150526_1	1123248.KB893359_gene2086	5.542e-248	767.0	COG1482@1|root,COG1482@2|Bacteria,4NGGP@976|Bacteroidetes,1IVE2@117747|Sphingobacteriia	976|Bacteroidetes	G	cell wall glycoprotein biosynthetic process	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_7150526_4	1123276.KB893313_gene3834	2.842e-170	541.0	COG2017@1|root,COG2017@2|Bacteria,4NHQH@976|Bacteroidetes,47JMF@768503|Cytophagia	976|Bacteroidetes	G	Domain of unknown function (DUF4432)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4432
BYD3_k127_7150526_6	1121481.AUAS01000001_gene4869	3.214e-113	370.0	COG2133@1|root,COG2133@2|Bacteria,4NFXB@976|Bacteroidetes,47N1Q@768503|Cytophagia	976|Bacteroidetes	G	Domain of Unknown Function (DUF1080)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1080
BYD3_k127_7150526_0	1185876.BN8_00373	0.0	1202.0	COG2010@1|root,COG2133@1|root,COG2010@2|Bacteria,COG2133@2|Bacteria,4NH6W@976|Bacteroidetes,47K4F@768503|Cytophagia	976|Bacteroidetes	CG	Cytochrome c	-	-	-	-	-	-	-	-	-	-	-	-	Cytochrom_C
BYD3_k127_7150526_8	1239962.C943_02096	2.23e-55	207.0	28MAS@1|root,318XW@2|Bacteria,4PPYP@976|Bacteroidetes,47V0P@768503|Cytophagia	976|Bacteroidetes	S	Protein of unknown function, DUF481	-	-	-	-	-	-	-	-	-	-	-	-	DUF481
BYD3_k127_7150526_10	1239962.C943_00992	6.669e-48	177.0	2C852@1|root,32YB2@2|Bacteria,4NM63@976|Bacteroidetes,47S6T@768503|Cytophagia	976|Bacteroidetes	S	Domain of unknown function (DUF4136)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4136
BYD3_k127_7150526_9	344747.PM8797T_11164	7.873e-51	195.0	COG3203@1|root,COG3203@2|Bacteria,2J2I3@203682|Planctomycetes	203682|Planctomycetes	M	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_7150526_7	1121904.ARBP01000086_gene1912	2.734e-56	207.0	COG3338@1|root,COG3338@2|Bacteria	2|Bacteria	P	carbonate dehydratase activity	cah	-	4.2.1.1	ko:K01674	ko00910,map00910	-	R00132,R10092	RC02807	ko00000,ko00001,ko01000	-	-	-	Carb_anhydrase
BYD3_k127_7150526_5	1120968.AUBX01000018_gene2165	7.729e-168	546.0	COG4775@1|root,COG4775@2|Bacteria,4NF38@976|Bacteroidetes,47KMS@768503|Cytophagia	976|Bacteroidetes	M	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_7154261_24	485918.Cpin_3756	1.432e-20	106.0	COG2304@1|root,COG3209@1|root,COG3291@1|root,COG3386@1|root,COG2304@2|Bacteria,COG3209@2|Bacteria,COG3291@2|Bacteria,COG3386@2|Bacteria,4NDZC@976|Bacteroidetes	976|Bacteroidetes	DZ	Pkd domain containing protein	-	-	-	-	-	-	-	-	-	-	-	-	CHU_C,DUF11
BYD3_k127_7154261_21	1296415.JACC01000067_gene2571	3.923e-27	127.0	COG1874@1|root,COG3209@1|root,COG3291@1|root,COG1874@2|Bacteria,COG3209@2|Bacteria,COG3291@2|Bacteria,4NRQS@976|Bacteroidetes,1ICMF@117743|Flavobacteriia,2YKMW@290174|Aquimarina	976|Bacteroidetes	GM	COG3209 Rhs family protein	-	-	-	-	-	-	-	-	-	-	-	-	Fibrinogen_C
BYD3_k127_7154261_20	1313421.JHBV01000026_gene405	6.057e-30	133.0	COG3047@1|root,COG3047@2|Bacteria,4PM1M@976|Bacteroidetes	976|Bacteroidetes	M	Outer membrane protein beta-barrel domain	-	-	-	-	-	-	-	-	-	-	-	-	OMP_b-brl_2
BYD3_k127_7154261_2	1237149.C900_05107	0.0	1027.0	COG2319@1|root,COG3064@1|root,COG2319@2|Bacteria,COG3064@2|Bacteria,4NEYQ@976|Bacteroidetes,47NKP@768503|Cytophagia	976|Bacteroidetes	M	WD40 repeats	-	-	-	-	-	-	-	-	-	-	-	-	WD40
BYD3_k127_7154261_15	1416760.AYMS01000045_gene3179	8.709e-54	192.0	COG0292@1|root,COG0292@2|Bacteria,4NNKU@976|Bacteroidetes,1I1Z2@117743|Flavobacteriia,47I63@76831|Myroides	976|Bacteroidetes	J	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit	rplT	GO:0000027,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006996,GO:0008150,GO:0009987,GO:0015934,GO:0016043,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0042254,GO:0042255,GO:0042273,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043933,GO:0044085,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071826,GO:0071840,GO:1990904	-	ko:K02887	ko03010,map03010	M00178	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_L20
BYD3_k127_7154261_23	643867.Ftrac_0508	5.273e-21	93.0	COG0291@1|root,COG0291@2|Bacteria,4NUVR@976|Bacteroidetes,47VWY@768503|Cytophagia	976|Bacteroidetes	J	Belongs to the bacterial ribosomal protein bL35 family	rpmI	GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904	-	ko:K02916	ko03010,map03010	M00178	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_L35p
BYD3_k127_7154261_12	1237149.C900_05836	1.864e-79	269.0	COG0290@1|root,COG0290@2|Bacteria,4NIZ5@976|Bacteroidetes,47PC6@768503|Cytophagia	976|Bacteroidetes	J	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins	infC	GO:0003674,GO:0003676,GO:0003723,GO:0003743,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006412,GO:0006413,GO:0006518,GO:0006807,GO:0006996,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016020,GO:0016043,GO:0019538,GO:0022411,GO:0032790,GO:0032984,GO:0032988,GO:0034641,GO:0034645,GO:0043021,GO:0043022,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1903008	-	ko:K02520	-	-	-	-	ko00000,ko03012,ko03029	-	-	-	IF3_C,IF3_N
BYD3_k127_7154261_1	1237149.C900_05835	0.0	1057.0	COG0441@1|root,COG0441@2|Bacteria,4NEFT@976|Bacteroidetes,47MA2@768503|Cytophagia	976|Bacteroidetes	J	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)	thrS	GO:0003674,GO:0003824,GO:0004812,GO:0004829,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006435,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576	6.1.1.3	ko:K01868	ko00970,map00970	M00359,M00360	R03663	RC00055,RC00523	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	-	-	-	HGTP_anticodon,TGS,tRNA-synt_2b,tRNA_SAD
BYD3_k127_7154261_0	1237149.C900_05833	0.0	1060.0	COG4775@1|root,COG4775@2|Bacteria,4NDYT@976|Bacteroidetes,47MA1@768503|Cytophagia	976|Bacteroidetes	M	CarboxypepD_reg-like domain	-	-	-	-	-	-	-	-	-	-	-	-	CarbopepD_reg_2
BYD3_k127_7154261_13	1237149.C900_05832	2.904e-73	252.0	COG2949@1|root,COG2949@2|Bacteria,4NNQS@976|Bacteroidetes,47MWP@768503|Cytophagia	976|Bacteroidetes	S	DUF218 domain	-	-	-	ko:K03748	-	-	-	-	ko00000	-	-	-	DUF218
BYD3_k127_7154261_14	1237149.C900_05831	1.328e-60	216.0	COG0566@1|root,COG0566@2|Bacteria,4NFH3@976|Bacteroidetes,47QCV@768503|Cytophagia	976|Bacteroidetes	J	Catalyzes the 2'-O methylation of guanosine at position 18 in tRNA	trmH	-	2.1.1.34	ko:K00556	-	-	-	-	ko00000,ko01000,ko03016	-	-	-	SpoU_methylase
BYD3_k127_7154261_4	1237149.C900_05133	2.789e-195	617.0	COG1972@1|root,COG1972@2|Bacteria,4NEYN@976|Bacteroidetes,47KKZ@768503|Cytophagia	976|Bacteroidetes	F	PFAM Na dependent nucleoside transporter	nupC	-	-	ko:K03317	-	-	-	-	ko00000	2.A.41	-	-	Gate,Nucleos_tra2_C,Nucleos_tra2_N
BYD3_k127_7154261_11	1237149.C900_05134	7.112e-93	308.0	COG1259@1|root,COG1259@2|Bacteria,4NGSW@976|Bacteroidetes,47KJI@768503|Cytophagia	976|Bacteroidetes	L	PFAM Uncharacterised ACR, COG1259	-	-	-	ko:K08999	-	-	-	-	ko00000	-	-	-	DNase-RNase,UVR
BYD3_k127_7154261_7	1237149.C900_05135	6.411e-144	462.0	COG2025@1|root,COG2025@2|Bacteria,4NFSE@976|Bacteroidetes,47JUQ@768503|Cytophagia	976|Bacteroidetes	C	Electron transfer flavoprotein, alpha subunit	etfA	-	-	ko:K03522	-	-	-	-	ko00000,ko04147	-	-	-	ETF,ETF_alpha
BYD3_k127_7154261_8	1237149.C900_05136	2.156e-121	392.0	COG2086@1|root,COG2086@2|Bacteria,4NFWB@976|Bacteroidetes,47KZ2@768503|Cytophagia	976|Bacteroidetes	C	Electron transfer flavoprotein	etfB	-	-	ko:K03521	-	-	-	-	ko00000	-	-	-	ETF
BYD3_k127_7154261_25	1237149.C900_05137	5.346e-20	95.0	COG3071@1|root,COG3071@2|Bacteria,4NUU1@976|Bacteroidetes,47RW4@768503|Cytophagia	976|Bacteroidetes	H	HemY protein	-	-	-	-	-	-	-	-	-	-	-	-	TPR_17,TPR_8
BYD3_k127_7154261_6	153721.MYP_2571	4.693e-144	462.0	COG3555@1|root,COG3555@2|Bacteria,4P65R@976|Bacteroidetes	976|Bacteroidetes	O	Aspartyl/Asparaginyl beta-hydroxylase	-	-	-	-	-	-	-	-	-	-	-	-	Asp_Arg_Hydrox
BYD3_k127_7154261_18	1279009.ADICEAN_02967	2.119e-43	168.0	COG2010@1|root,COG3291@1|root,COG2010@2|Bacteria,COG3291@2|Bacteria,4NV3K@976|Bacteroidetes,47W7K@768503|Cytophagia	976|Bacteroidetes	C	Pkd domain containing protein	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_7154261_3	1237149.C900_05140	1.082e-238	746.0	COG0305@1|root,COG0305@2|Bacteria,4NF8P@976|Bacteroidetes,47JB5@768503|Cytophagia	976|Bacteroidetes	L	Participates in initiation and elongation during chromosome replication	dnaB	-	3.6.4.12	ko:K02314	ko03030,ko04112,map03030,map04112	-	-	-	ko00000,ko00001,ko01000,ko03032	-	-	-	DnaB,DnaB_C
BYD3_k127_7154261_5	1237149.C900_05141	2.997e-183	583.0	COG0773@1|root,COG0773@2|Bacteria,4NF99@976|Bacteroidetes,47JEX@768503|Cytophagia	976|Bacteroidetes	M	Mur ligase middle domain	mpl	-	6.3.2.45,6.3.2.8	ko:K01924,ko:K02558	ko00471,ko00550,ko01100,map00471,map00550,map01100	-	R03193	RC00064,RC00141	ko00000,ko00001,ko01000,ko01011	-	-	-	Mur_ligase,Mur_ligase_C,Mur_ligase_M
BYD3_k127_7154261_10	1237149.C900_05142	2.157e-114	374.0	COG0847@1|root,COG0847@2|Bacteria,4NE82@976|Bacteroidetes,47N5P@768503|Cytophagia	976|Bacteroidetes	L	DNA polymerase III	dnaQ	-	2.7.7.7	ko:K02342	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	M00260	R00375,R00376,R00377,R00378	RC02795	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	-	-	-	RNase_T
BYD3_k127_7154261_17	493475.GARC_2123	2.543e-44	185.0	COG2911@1|root,COG4935@1|root,COG2911@2|Bacteria,COG4935@2|Bacteria,1NJV7@1224|Proteobacteria,1RN7Q@1236|Gammaproteobacteria,465ZC@72275|Alteromonadaceae	1236|Gammaproteobacteria	O	Metallo-peptidase family M12B Reprolysin-like	-	-	-	-	-	-	-	-	-	-	-	-	Reprolysin_4
BYD3_k127_7154261_28	1535422.ND16A_3721	3.609e-13	83.0	COG4935@1|root,COG5295@1|root,COG4935@2|Bacteria,COG5295@2|Bacteria,1NJV7@1224|Proteobacteria,1RN7Q@1236|Gammaproteobacteria	1236|Gammaproteobacteria	O	Metallo-peptidase family M12B Reprolysin-like	-	-	-	-	-	-	-	-	-	-	-	-	Reprolysin_4
BYD3_k127_7154261_26	1454007.JAUG01000079_gene4548	4.313e-15	90.0	COG3291@1|root,COG3291@2|Bacteria,4NDZQ@976|Bacteroidetes,1IS57@117747|Sphingobacteriia	976|Bacteroidetes	S	C-terminal domain of CHU protein family	-	-	-	-	-	-	-	-	-	-	-	-	CHU_C,HYR,SprB
BYD3_k127_7154261_16	493475.GARC_2123	6.992e-51	206.0	COG2911@1|root,COG4935@1|root,COG2911@2|Bacteria,COG4935@2|Bacteria,1NJV7@1224|Proteobacteria,1RN7Q@1236|Gammaproteobacteria,465ZC@72275|Alteromonadaceae	1236|Gammaproteobacteria	O	Metallo-peptidase family M12B Reprolysin-like	-	-	-	-	-	-	-	-	-	-	-	-	Reprolysin_4
BYD3_k127_7154261_27	925409.KI911562_gene2434	9.952e-15	89.0	COG3291@1|root,COG3291@2|Bacteria,4NGZV@976|Bacteroidetes,1IR9W@117747|Sphingobacteriia	976|Bacteroidetes	U	PFAM PKD domain	-	-	-	-	-	-	-	-	-	-	-	-	CHU_C,IgGFc_binding,PKD,SprB
BYD3_k127_7154261_9	1237149.C900_03775	4.69e-120	395.0	COG4192@1|root,COG4192@2|Bacteria,4NFY7@976|Bacteroidetes,47MMQ@768503|Cytophagia	976|Bacteroidetes	T	Domain of unknown function (DUF4407)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4407
BYD3_k127_7154261_22	313606.M23134_07146	2.486e-23	105.0	COG0328@1|root,COG0328@2|Bacteria,4NZ41@976|Bacteroidetes,47T0B@768503|Cytophagia	976|Bacteroidetes	L	RNase H	-	-	-	-	-	-	-	-	-	-	-	-	RNase_H
BYD3_k127_7154261_19	335543.Sfum_2158	7.006e-33	140.0	COG3391@1|root,COG3391@2|Bacteria,1NT97@1224|Proteobacteria,42RMY@68525|delta/epsilon subdivisions,2WNJD@28221|Deltaproteobacteria	28221|Deltaproteobacteria	G	NHL repeat	-	-	-	-	-	-	-	-	-	-	-	-	NHL
BYD3_k127_7194476_4	1237149.C900_00485	2.069e-128	413.0	COG1028@1|root,COG1028@2|Bacteria,4NEAI@976|Bacteroidetes,47MF7@768503|Cytophagia	976|Bacteroidetes	IQ	TIGRFAM 3-oxoacyl-(acyl-carrier-protein) reductase	fabG	-	1.1.1.100	ko:K00059	ko00061,ko00333,ko00780,ko01040,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01040,map01100,map01130,map01212	M00083,M00572	R04533,R04534,R04536,R04543,R04566,R04953,R04964,R07759,R07763,R10116,R10120,R11671	RC00029,RC00117	ko00000,ko00001,ko00002,ko01000,ko01004	-	-	-	adh_short_C2
BYD3_k127_7194476_1	1124780.ANNU01000035_gene276	9.608e-244	759.0	COG1249@1|root,COG1249@2|Bacteria,4NDVC@976|Bacteroidetes,47JS2@768503|Cytophagia	976|Bacteroidetes	C	dihydrolipoamide dehydrogenase	lpdA	-	1.8.1.4	ko:K00382	ko00010,ko00020,ko00260,ko00280,ko00620,ko00630,ko00640,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00020,map00260,map00280,map00620,map00630,map00640,map01100,map01110,map01120,map01130,map01200	M00009,M00011,M00036,M00307,M00532	R00209,R01221,R01698,R03815,R07618,R08549	RC00004,RC00022,RC00583,RC02742,RC02833,RC02834	br01601,ko00000,ko00001,ko00002,ko01000,ko04147	-	-	-	Pyr_redox_2,Pyr_redox_dim
BYD3_k127_7194476_2	1237149.C900_02822	2.039e-237	740.0	COG1249@1|root,COG1249@2|Bacteria,4NDVC@976|Bacteroidetes,47K0E@768503|Cytophagia	976|Bacteroidetes	C	Dihydrolipoyl dehydrogenase	lpd	-	1.8.1.4	ko:K00382	ko00010,ko00020,ko00260,ko00280,ko00620,ko00630,ko00640,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00020,map00260,map00280,map00620,map00630,map00640,map01100,map01110,map01120,map01130,map01200	M00009,M00011,M00036,M00307,M00532	R00209,R01221,R01698,R03815,R07618,R08549	RC00004,RC00022,RC00583,RC02742,RC02833,RC02834	br01601,ko00000,ko00001,ko00002,ko01000,ko04147	-	-	-	Pyr_redox_2,Pyr_redox_dim
BYD3_k127_7194476_3	1124780.ANNU01000052_gene3584	1.279e-199	633.0	COG0508@1|root,COG0508@2|Bacteria,4NF33@976|Bacteroidetes,47K2Z@768503|Cytophagia	976|Bacteroidetes	C	The 2-oxoglutarate dehydrogenase complex catalyzes the overall conversion of 2-oxoglutarate to succinyl-CoA and CO(2)	sucB	-	2.3.1.61	ko:K00658	ko00020,ko00310,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00310,map01100,map01110,map01120,map01130,map01200	M00009,M00011,M00032	R02570,R02571,R08549	RC00004,RC02727,RC02833	br01601,ko00000,ko00001,ko00002,ko01000	-	-	-	2-oxoacid_dh,Biotin_lipoyl,E3_binding
BYD3_k127_7194476_0	1237149.C900_02826	0.0	1387.0	COG0567@1|root,COG0567@2|Bacteria,4NEU9@976|Bacteroidetes,47JXI@768503|Cytophagia	976|Bacteroidetes	C	2-oxoglutarate dehydrogenase, E1	sucA	-	1.2.4.2	ko:K00164	ko00020,ko00310,ko00380,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00310,map00380,map01100,map01110,map01120,map01130,map01200	M00009,M00011,M00032	R00621,R01933,R01940,R03316,R08549	RC00004,RC00027,RC00627,RC02743,RC02833,RC02883	br01601,ko00000,ko00001,ko00002,ko01000	-	-	-	2-oxoacid_dh,2-oxogl_dehyd_N,E1_dh,OxoGdeHyase_C,Transket_pyr
BYD3_k127_7194476_5	1237149.C900_02827	5.25e-62	217.0	COG0228@1|root,COG0228@2|Bacteria,4NNY8@976|Bacteroidetes,47PR5@768503|Cytophagia	976|Bacteroidetes	J	Belongs to the bacterial ribosomal protein bS16 family	rpsP	GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904	-	ko:K02959	ko03010,map03010	M00178	-	-	br01610,ko00000,ko00001,ko00002,ko03011,ko03029	-	-	-	Ribosomal_S16
BYD3_k127_7203336_93	945713.IALB_1312	8.743e-16	84.0	COG0388@1|root,COG0388@2|Bacteria	2|Bacteria	S	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds	-	-	-	ko:K11206	-	-	-	-	ko00000,ko01000	-	-	-	CN_hydrolase
BYD3_k127_7203336_63	1237149.C900_03994	5.156e-58	210.0	2A7CX@1|root,334RT@2|Bacteria,4NVQR@976|Bacteroidetes,47RXJ@768503|Cytophagia	976|Bacteroidetes	S	Outer membrane protein beta-barrel domain	-	-	-	-	-	-	-	-	-	-	-	-	OMP_b-brl_2
BYD3_k127_7203336_43	1237149.C900_04787	3.218e-104	352.0	COG0318@1|root,COG0318@2|Bacteria,4NDXK@976|Bacteroidetes,47JPB@768503|Cytophagia	976|Bacteroidetes	IQ	PFAM Acyl-protein synthetase, LuxE	-	-	-	-	-	-	-	-	-	-	-	-	LuxE
BYD3_k127_7203336_86	1124780.ANNU01000044_gene526	1.906e-26	121.0	2E691@1|root,32WA1@2|Bacteria,4NT8M@976|Bacteroidetes,47R10@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_7203336_2	1237149.C900_04789	0.0	1160.0	COG0022@1|root,COG1071@1|root,COG0022@2|Bacteria,COG1071@2|Bacteria,4NE4A@976|Bacteroidetes,47KBI@768503|Cytophagia	976|Bacteroidetes	C	Dehydrogenase E1 component	pdhB	-	2.2.1.1	ko:K00615	ko00030,ko00710,ko01051,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00710,map01051,map01100,map01110,map01120,map01130,map01200,map01230	M00004,M00007,M00165,M00167	R01067,R01641,R01830,R06590	RC00032,RC00226,RC00571,RC01560	ko00000,ko00001,ko00002,ko01000	-	-	-	E1_dh,Transket_pyr,Transketolase_C
BYD3_k127_7203336_11	1237149.C900_04790	1.591e-191	602.0	COG0686@1|root,COG0686@2|Bacteria,4NE8F@976|Bacteroidetes,47K8G@768503|Cytophagia	976|Bacteroidetes	E	Belongs to the AlaDH PNT family	ald	-	1.4.1.1	ko:K00259	ko00250,ko00430,ko01100,map00250,map00430,map01100	-	R00396	RC00008	ko00000,ko00001,ko01000	-	-	-	AlaDh_PNT_C,AlaDh_PNT_N
BYD3_k127_7203336_70	153721.MYP_2150	9.327e-47	172.0	COG4096@1|root,COG4096@2|Bacteria,4NNKI@976|Bacteroidetes,47QPJ@768503|Cytophagia	976|Bacteroidetes	V	Type I restriction enzyme R Protein	-	-	-	-	-	-	-	-	-	-	-	-	HSDR_N_2
BYD3_k127_7203336_31	700598.Niako_5038	3.758e-134	433.0	COG2820@1|root,COG2820@2|Bacteria,4NESQ@976|Bacteroidetes,1IP9I@117747|Sphingobacteriia	976|Bacteroidetes	F	Catalyzes the hydrolysis of AMP to form adenine and ribose 5-phosphate using water as the nucleophile	amn	-	3.2.2.4	ko:K01241	ko00230,map00230	-	R00182	RC00063,RC00318	ko00000,ko00001,ko01000	-	-	-	PNP_UDP_1
BYD3_k127_7203336_20	1237149.C900_04795	4.838e-163	524.0	COG2270@1|root,COG2270@2|Bacteria,4NEKI@976|Bacteroidetes,47JQM@768503|Cytophagia	976|Bacteroidetes	S	PFAM Vacuole effluxer Atg22 like	-	-	-	ko:K06902	ko04138,map04138	-	-	-	ko00000,ko00001,ko02000,ko04131	2.A.1.24,9.A.15.1	-	-	ATG22
BYD3_k127_7203336_57	1237149.C900_04796	7.929e-65	224.0	COG0848@1|root,COG0848@2|Bacteria,4NKT1@976|Bacteroidetes,47PP4@768503|Cytophagia	976|Bacteroidetes	U	Biopolymer transport protein ExbD/TolR	-	-	-	ko:K03559	-	-	-	-	ko00000,ko02000	1.A.30.2.1	-	-	ExbD
BYD3_k127_7203336_69	643867.Ftrac_0616	4.495e-51	187.0	COG0848@1|root,COG0848@2|Bacteria,4NHYQ@976|Bacteroidetes,47JBU@768503|Cytophagia	976|Bacteroidetes	U	Biopolymer transport protein ExbD/TolR	-	-	-	-	-	-	-	-	-	-	-	-	ExbD
BYD3_k127_7203336_94	643867.Ftrac_0617	9.035e-15	78.0	2E2VE@1|root,32XX2@2|Bacteria,4NUIE@976|Bacteroidetes,47RT3@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_7203336_46	1237149.C900_04800	1.075e-99	332.0	COG0811@1|root,COG0811@2|Bacteria,4NEA2@976|Bacteroidetes,47JQQ@768503|Cytophagia	976|Bacteroidetes	U	PFAM MotA TolQ ExbB proton channel family	exbB	-	-	ko:K03561	-	-	-	-	ko00000,ko02000	1.A.30.2.1	-	-	MotA_ExbB
BYD3_k127_7203336_97	1197906.CAJQ02000027_gene1525	1.578e-09	58.0	COG1961@1|root,COG1961@2|Bacteria,1MWCZ@1224|Proteobacteria,2TRIY@28211|Alphaproteobacteria,3JV1X@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	L	Recombinase zinc beta ribbon domain	-	-	-	ko:K06400	-	-	-	-	ko00000	-	-	-	Recombinase,Resolvase,Zn_ribbon_recom
BYD3_k127_7203336_34	1237149.C900_04801	1.135e-132	432.0	COG0252@1|root,COG0252@2|Bacteria,4NE2Z@976|Bacteroidetes,47KWG@768503|Cytophagia	976|Bacteroidetes	EJ	TIGRFAM L-asparaginases, type I	ansA	-	3.5.1.1	ko:K01424	ko00250,ko00460,ko01100,ko01110,map00250,map00460,map01100,map01110	-	R00485	RC00010,RC02798	ko00000,ko00001,ko01000	-	-	-	Asparaginase
BYD3_k127_7203336_38	1237149.C900_04802	1.133e-112	368.0	COG0084@1|root,COG0084@2|Bacteria,4NEVW@976|Bacteroidetes,47KE3@768503|Cytophagia	976|Bacteroidetes	L	TIGRFAM hydrolase, TatD family	tatD	-	-	ko:K03424	-	-	-	-	ko00000,ko01000	-	-	-	TatD_DNase
BYD3_k127_7203336_85	1268240.ATFI01000003_gene5117	8.302e-27	113.0	COG0818@1|root,COG0818@2|Bacteria,4NQ39@976|Bacteroidetes,2FSJ8@200643|Bacteroidia,4AQWN@815|Bacteroidaceae	976|Bacteroidetes	M	Psort location CytoplasmicMembrane, score	dgkA	-	2.7.1.107,2.7.1.66	ko:K00887,ko:K00901	ko00550,ko00561,ko00564,ko01100,ko01110,ko04070,ko04072,ko05231,map00550,map00561,map00564,map01100,map01110,map04070,map04072,map05231	-	R02240,R05626	RC00002,RC00017	ko00000,ko00001,ko01000	-	-	-	DAGK_prokar
BYD3_k127_7203336_54	929713.NIASO_17110	9.419e-78	273.0	COG0707@1|root,COG0707@2|Bacteria,4NFRJ@976|Bacteroidetes,1IX57@117747|Sphingobacteriia	976|Bacteroidetes	M	Glycosyl transferase family 1	-	-	-	-	-	-	-	-	-	-	-	-	Glyco_tran_28_C,Glyco_trans_1_3
BYD3_k127_7203336_56	929562.Emtol_2802	6.362e-67	235.0	COG0726@1|root,COG0726@2|Bacteria,4NM7D@976|Bacteroidetes,47PE1@768503|Cytophagia	976|Bacteroidetes	G	PFAM Polysaccharide deacetylase	pgdA_1	-	-	-	-	-	-	-	-	-	-	-	Polysacc_deac_1
BYD3_k127_7203336_14	1237149.C900_04805	1.257e-178	568.0	COG2208@1|root,COG2208@2|Bacteria,4NI98@976|Bacteroidetes,47KA0@768503|Cytophagia	976|Bacteroidetes	KT	PFAM Stage II sporulation protein E (SpoIIE)	-	-	3.1.3.3	ko:K07315	-	-	-	-	ko00000,ko01000,ko03021	-	-	-	SpoIIE
BYD3_k127_7203336_58	1237149.C900_04806	8.237e-64	234.0	COG1215@1|root,COG1215@2|Bacteria,4NG9C@976|Bacteroidetes,47KYN@768503|Cytophagia	976|Bacteroidetes	M	PFAM Glycosyl transferase family 2	-	-	-	-	-	-	-	-	-	-	-	-	Glyco_tranf_2_3,Glycos_transf_2
BYD3_k127_7203336_53	1237149.C900_04808	2.308e-86	288.0	COG0817@1|root,COG0817@2|Bacteria,4NDV6@976|Bacteroidetes,47PA6@768503|Cytophagia	976|Bacteroidetes	L	Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group	ruvC	-	3.1.22.4	ko:K01159	ko03440,map03440	-	-	-	ko00000,ko00001,ko01000,ko03400	-	-	-	RuvC
BYD3_k127_7203336_52	273121.WS2190	8.752e-87	300.0	COG0438@1|root,COG0438@2|Bacteria,1N57K@1224|Proteobacteria,42Z80@68525|delta/epsilon subdivisions,2YRKI@29547|Epsilonproteobacteria	29547|Epsilonproteobacteria	M	Glycosyltransferase Family 4	-	-	-	-	-	-	-	-	-	-	-	-	Glyco_transf_4
BYD3_k127_7203336_67	743722.Sph21_2024	6.218e-52	197.0	2DMHZ@1|root,32RNI@2|Bacteria,4NTBA@976|Bacteroidetes	976|Bacteroidetes	S	Psort location Cytoplasmic, score 8.96	-	-	-	-	-	-	-	-	-	-	-	-	Glyco_transf_56
BYD3_k127_7203336_24	509635.N824_26245	4.167e-153	490.0	COG0399@1|root,COG0399@2|Bacteria,4NGI4@976|Bacteroidetes,1IPNX@117747|Sphingobacteriia	976|Bacteroidetes	E	Belongs to the DegT DnrJ EryC1 family	vioA	-	2.6.1.33	ko:K20429	-	-	R02773	RC00006,RC00781	ko00000,ko01000	-	-	-	DegT_DnrJ_EryC1
BYD3_k127_7203336_99	1160721.RBI_I00606	7.105e-08	65.0	COG2244@1|root,COG2244@2|Bacteria,1TRRI@1239|Firmicutes,24EFD@186801|Clostridia,3WIDN@541000|Ruminococcaceae	186801|Clostridia	S	Polysaccharide biosynthesis protein	-	-	-	-	-	-	-	-	-	-	-	-	Polysacc_synt,Polysacc_synt_C
BYD3_k127_7203336_37	1123057.P872_13745	5.987e-113	380.0	COG0438@1|root,COG0438@2|Bacteria,4NE6S@976|Bacteroidetes,47P7K@768503|Cytophagia	976|Bacteroidetes	M	Glycosyl transferases group 1	-	-	-	-	-	-	-	-	-	-	-	-	Glyco_trans_1_4,Glyco_transf_4
BYD3_k127_7203336_44	1120968.AUBX01000013_gene3474	4.803e-104	349.0	COG0324@1|root,COG0324@2|Bacteria,4NEAE@976|Bacteroidetes,47KKI@768503|Cytophagia	976|Bacteroidetes	J	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)	miaA	GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016765,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0052381,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360	2.5.1.75	ko:K00791	ko00908,ko01100,ko01110,map00908,map01100,map01110	-	R01122	RC02820	ko00000,ko00001,ko01000,ko01006,ko03016	-	-	-	IPPT
BYD3_k127_7203336_81	643867.Ftrac_0832	5.02e-29	120.0	2E4YQ@1|root,32ZSH@2|Bacteria,4NVKX@976|Bacteroidetes,47RX3@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_7203336_39	1237149.C900_01615	3.028e-111	364.0	COG1235@1|root,COG1235@2|Bacteria,4NDWB@976|Bacteroidetes,47JF0@768503|Cytophagia	976|Bacteroidetes	S	of the beta-lactamase superfamily I	phnP	-	3.1.4.55	ko:K06167	ko00440,map00440	-	R10205	RC00296	ko00000,ko00001,ko01000	-	-	-	Lactamase_B_2
BYD3_k127_7203336_30	1124780.ANNU01000045_gene2315	4.485e-135	447.0	COG1293@1|root,COG1293@2|Bacteria,4NGP5@976|Bacteroidetes,47M54@768503|Cytophagia	976|Bacteroidetes	K	Fibronectin-binding protein A N-terminus (FbpA)	-	-	-	-	-	-	-	-	-	-	-	-	DUF814,FbpA
BYD3_k127_7203336_9	1237149.C900_01617	1.246e-204	646.0	COG0469@1|root,COG0469@2|Bacteria,4NEEU@976|Bacteroidetes,47JS3@768503|Cytophagia	976|Bacteroidetes	G	Belongs to the pyruvate kinase family	pyk	-	2.7.1.40	ko:K00873	ko00010,ko00230,ko00620,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko04930,ko05165,ko05203,ko05230,map00010,map00230,map00620,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map04930,map05165,map05203,map05230	M00001,M00002,M00049,M00050	R00200,R00430,R01138,R01858,R02320	RC00002,RC00015	ko00000,ko00001,ko00002,ko01000,ko04131,ko04147	-	-	-	PK,PK_C
BYD3_k127_7203336_89	1124780.ANNU01000045_gene2313	2.154e-22	102.0	2DNED@1|root,32UIS@2|Bacteria,4NUJS@976|Bacteroidetes,47RRD@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_7203336_74	1124780.ANNU01000045_gene2312	2.587e-36	140.0	COG0236@1|root,COG0236@2|Bacteria,4NS6C@976|Bacteroidetes,47R56@768503|Cytophagia	976|Bacteroidetes	IQ	Carrier of the growing fatty acid chain in fatty acid biosynthesis	acpP	GO:0000035,GO:0000036,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0016053,GO:0019637,GO:0019752,GO:0019842,GO:0031177,GO:0032787,GO:0033218,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0044620,GO:0046394,GO:0046467,GO:0046493,GO:0048037,GO:0051192,GO:0071704,GO:0072330,GO:0072341,GO:0090407,GO:0140104,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509	-	ko:K02078	-	-	-	-	ko00000,ko00001	-	-	-	PP-binding
BYD3_k127_7203336_7	1123057.P872_01175	2.951e-214	671.0	COG0304@1|root,COG0304@2|Bacteria,4NEKC@976|Bacteroidetes,47MQI@768503|Cytophagia	976|Bacteroidetes	I	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP	fabF	-	2.3.1.179	ko:K09458	ko00061,ko00780,ko01100,ko01212,map00061,map00780,map01100,map01212	M00083,M00572	R04355,R04726,R04952,R04957,R04960,R04963,R04968,R07762,R10115,R10119	RC00039,RC02728,RC02729,RC02888	ko00000,ko00001,ko00002,ko01000,ko01004	-	-	-	Ketoacyl-synt_C,ketoacyl-synt
BYD3_k127_7203336_51	1237149.C900_01621	3.793e-88	297.0	COG0571@1|root,COG0571@2|Bacteria,4NE0N@976|Bacteroidetes,47K17@768503|Cytophagia	976|Bacteroidetes	J	Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism	rnc	-	3.1.26.3	ko:K03685	ko03008,ko05205,map03008,map05205	-	-	-	ko00000,ko00001,ko01000,ko03009,ko03019,ko03036	-	-	-	Ribonucleas_3_3,dsrm
BYD3_k127_7203336_6	153721.MYP_3805	7.052e-229	723.0	COG0171@1|root,COG0388@1|root,COG0171@2|Bacteria,COG0388@2|Bacteria,4NHXQ@976|Bacteroidetes,47JFU@768503|Cytophagia	976|Bacteroidetes	H	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source	nadE	-	6.3.5.1	ko:K01950	ko00760,ko01100,map00760,map01100	M00115	R00257	RC00010,RC00100	ko00000,ko00001,ko00002,ko01000	-	-	-	CN_hydrolase,NAD_synthase
BYD3_k127_7203336_48	1124780.ANNU01000045_gene2308	1.801e-98	334.0	COG0682@1|root,COG0682@2|Bacteria,4NFP7@976|Bacteroidetes,47KQC@768503|Cytophagia	976|Bacteroidetes	M	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins	lgt	-	-	-	-	-	-	-	-	-	-	-	LGT
BYD3_k127_7203336_28	1237149.C900_01627	1.465e-146	478.0	COG4775@1|root,COG4775@2|Bacteria,4NF9Y@976|Bacteroidetes,47KUK@768503|Cytophagia	976|Bacteroidetes	M	PFAM surface antigen variable number repeat	-	-	-	-	-	-	-	-	-	-	-	-	Bac_surface_Ag,POTRA
BYD3_k127_7203336_65	1048983.EL17_16545	1.64e-53	198.0	COG1555@1|root,COG1555@2|Bacteria,4NQC1@976|Bacteroidetes,47Q92@768503|Cytophagia	976|Bacteroidetes	L	photosystem II stabilization	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_7203336_17	1237149.C900_01630	1.581e-173	567.0	COG1555@1|root,COG1555@2|Bacteria,4NE88@976|Bacteroidetes,47KA3@768503|Cytophagia	976|Bacteroidetes	L	Helix-hairpin-helix motif	-	-	-	-	-	-	-	-	-	-	-	-	HHH_3
BYD3_k127_7203336_61	643867.Ftrac_2941	1.686e-59	214.0	COG3595@1|root,COG3595@2|Bacteria	2|Bacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	DUF2807
BYD3_k127_7203336_75	761193.Runsl_4993	4.233e-35	136.0	COG0724@1|root,COG0724@2|Bacteria,4NT1J@976|Bacteroidetes,47RES@768503|Cytophagia	976|Bacteroidetes	S	RNA recognition motif	-	-	-	-	-	-	-	-	-	-	-	-	RRM_1
BYD3_k127_7203336_102	311424.DhcVS_165	7.137e-05	51.0	2A4GT@1|root,30T30@2|Bacteria,2GAZ0@200795|Chloroflexi,34DM6@301297|Dehalococcoidia	301297|Dehalococcoidia	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_7203336_76	1120965.AUBV01000004_gene696	7.439e-35	138.0	COG2259@1|root,COG2259@2|Bacteria,4NP94@976|Bacteroidetes,47QI2@768503|Cytophagia	976|Bacteroidetes	S	DoxX	-	-	-	-	-	-	-	-	-	-	-	-	DoxX
BYD3_k127_7203336_23	509635.N824_15690	6.85e-156	507.0	COG1070@1|root,COG1070@2|Bacteria,4NFBG@976|Bacteroidetes,1IPCF@117747|Sphingobacteriia	976|Bacteroidetes	G	Belongs to the FGGY kinase family	-	-	2.7.1.12	ko:K00851	ko00030,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map01100,map01110,map01120,map01130,map01200	-	R01737	RC00002,RC00017	ko00000,ko00001,ko01000	-	-	-	FGGY_C,FGGY_N
BYD3_k127_7203336_27	1237149.C900_01635	1.251e-148	482.0	COG1408@1|root,COG1408@2|Bacteria,4NFCH@976|Bacteroidetes,47KGU@768503|Cytophagia	976|Bacteroidetes	S	Calcineurin-like phosphoesterase superfamily domain	-	-	-	ko:K07098	-	-	-	-	ko00000	-	-	-	Metallophos
BYD3_k127_7203336_15	1237149.C900_01635	4.673e-175	557.0	COG1408@1|root,COG1408@2|Bacteria,4NFCH@976|Bacteroidetes,47KGU@768503|Cytophagia	976|Bacteroidetes	S	Calcineurin-like phosphoesterase superfamily domain	-	-	-	ko:K07098	-	-	-	-	ko00000	-	-	-	Metallophos
BYD3_k127_7203336_0	929556.Solca_1727	0.0	1439.0	COG0841@1|root,COG0841@2|Bacteria,4NDZG@976|Bacteroidetes,1IQYT@117747|Sphingobacteriia	976|Bacteroidetes	V	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family	-	-	-	-	-	-	-	-	-	-	-	-	ACR_tran
BYD3_k127_7203336_40	929556.Solca_1726	6.717e-108	361.0	COG0845@1|root,COG0845@2|Bacteria,4NERP@976|Bacteroidetes,1IP8S@117747|Sphingobacteriia	976|Bacteroidetes	M	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family	-	-	-	-	-	-	-	-	-	-	-	-	HlyD_D23
BYD3_k127_7203336_41	153721.MYP_3666	4.917e-106	361.0	COG1538@1|root,COG1538@2|Bacteria,4NF4X@976|Bacteroidetes,47KE9@768503|Cytophagia	976|Bacteroidetes	MU	PFAM Outer membrane efflux protein	-	-	-	-	-	-	-	-	-	-	-	-	OEP
BYD3_k127_7203336_55	1237149.C900_01639	1.643e-70	246.0	COG1309@1|root,COG1309@2|Bacteria,4NQ99@976|Bacteroidetes,47QGN@768503|Cytophagia	976|Bacteroidetes	K	PFAM Bacterial regulatory proteins, tetR family	-	-	-	-	-	-	-	-	-	-	-	-	TetR_N
BYD3_k127_7203336_92	1237149.C900_01640	2.467e-17	85.0	2E5Q2@1|root,330EP@2|Bacteria,4NUMS@976|Bacteroidetes,47SBQ@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_7203336_62	269798.CHU_1616	1.963e-58	208.0	COG1595@1|root,COG1595@2|Bacteria,4NN4K@976|Bacteroidetes,47QDX@768503|Cytophagia	976|Bacteroidetes	K	TIGRFAM RNA polymerase sigma factor, sigma-70 family	fecI	-	-	-	-	-	-	-	-	-	-	-	Sigma70_r2,Sigma70_r4,Sigma70_r4_2
BYD3_k127_7203336_25	1288963.ADIS_2103	3.276e-150	490.0	COG0471@1|root,COG0471@2|Bacteria,4NFDK@976|Bacteroidetes,47JJT@768503|Cytophagia	976|Bacteroidetes	P	PFAM Sodium sulfate symporter transmembrane region	-	-	-	ko:K14445	-	-	-	-	ko00000,ko02000	2.A.47.1	-	-	Na_sulph_symp
BYD3_k127_7203336_22	1408813.AYMG01000025_gene2702	1.363e-161	539.0	COG0642@1|root,COG0784@1|root,COG0784@2|Bacteria,COG2205@2|Bacteria,4NFEF@976|Bacteroidetes,1IQWZ@117747|Sphingobacteriia	976|Bacteroidetes	T	Histidine kinase	-	-	-	-	-	-	-	-	-	-	-	-	HATPase_c,HisKA,Hpt,Response_reg
BYD3_k127_7203336_21	743722.Sph21_3147	2.707e-162	522.0	COG2204@1|root,COG2204@2|Bacteria,4NE89@976|Bacteroidetes,1INN4@117747|Sphingobacteriia	976|Bacteroidetes	T	COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains	zraR	-	-	ko:K07713	ko02020,map02020	M00499	-	-	ko00000,ko00001,ko00002,ko02022	-	-	-	HTH_8,Response_reg,Sigma54_activat
BYD3_k127_7203336_100	1121481.AUAS01000005_gene1883	6.085e-07	55.0	2EQES@1|root,33I0R@2|Bacteria,4NY5D@976|Bacteroidetes	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_7203336_82	1237149.C900_04012	8.536e-29	119.0	2DQ9W@1|root,335IW@2|Bacteria,4NX9R@976|Bacteroidetes,47SCH@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_7203336_64	1237149.C900_04011	5.684e-57	204.0	COG1595@1|root,COG1595@2|Bacteria,4NSVA@976|Bacteroidetes,47QAU@768503|Cytophagia	976|Bacteroidetes	K	TIGRFAM RNA polymerase sigma factor, sigma-70 family	-	-	-	ko:K03088	-	-	-	-	ko00000,ko03021	-	-	-	Sigma70_r2,Sigma70_r4_2
BYD3_k127_7203336_18	1123248.KB893315_gene3196	9.304e-172	549.0	COG0477@1|root,COG2814@2|Bacteria,4NE09@976|Bacteroidetes,1IR2W@117747|Sphingobacteriia	976|Bacteroidetes	EGP	Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family	-	-	-	-	-	-	-	-	-	-	-	-	Sugar_tr
BYD3_k127_7203336_5	1279009.ADICEAN_02501	6.941e-234	728.0	COG0499@1|root,COG0499@2|Bacteria,4NEKE@976|Bacteroidetes,47KGI@768503|Cytophagia	976|Bacteroidetes	H	May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine	ahcY	GO:0000096,GO:0003674,GO:0003824,GO:0004013,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006520,GO:0006534,GO:0006555,GO:0006575,GO:0006725,GO:0006732,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009066,GO:0009069,GO:0009116,GO:0009119,GO:0009987,GO:0016787,GO:0016801,GO:0016802,GO:0017144,GO:0019752,GO:0033353,GO:0034641,GO:0042278,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046128,GO:0046439,GO:0046483,GO:0046498,GO:0046500,GO:0051186,GO:0055086,GO:0071704,GO:0072521,GO:1901135,GO:1901360,GO:1901564,GO:1901605,GO:1901657	3.3.1.1	ko:K01251	ko00270,ko01100,map00270,map01100	M00035	R00192,R04936	RC00056,RC00069,RC01161,RC01243	ko00000,ko00001,ko00002,ko01000,ko01009,ko04147	-	-	-	AdoHcyase,AdoHcyase_NAD
BYD3_k127_7203336_26	1237149.C900_01850	1.221e-148	483.0	COG4409@1|root,COG4409@2|Bacteria,4NJCZ@976|Bacteroidetes	976|Bacteroidetes	G	exo-alpha-(2->6)-sialidase activity	-	-	-	-	-	-	-	-	-	-	-	-	BNR_2
BYD3_k127_7203336_68	485918.Cpin_2011	1.198e-51	189.0	298PT@1|root,2ZVU7@2|Bacteria,4NPTP@976|Bacteroidetes,1IY91@117747|Sphingobacteriia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_7203336_19	929713.NIASO_13295	2.343e-163	524.0	COG1541@1|root,COG1541@2|Bacteria,4NGRR@976|Bacteroidetes,1IP0X@117747|Sphingobacteriia	976|Bacteroidetes	H	AMP-binding enzyme	paaK	-	6.2.1.30	ko:K01912	ko00360,ko01120,ko05111,map00360,map01120,map05111	-	R02539	RC00004,RC00014	ko00000,ko00001,ko01000	-	-	-	AMP-binding,AMP-binding_C_2
BYD3_k127_7203336_79	1047013.AQSP01000059_gene2096	1.634e-31	127.0	COG0736@1|root,COG0736@2|Bacteria,2NPTD@2323|unclassified Bacteria	2|Bacteria	I	Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein	acpS	-	2.7.8.7,4.2.1.136	ko:K00997,ko:K17758	ko00770,map00770	-	R01625	RC00002	ko00000,ko00001,ko01000	-	-	-	ACPS,Carb_kinase
BYD3_k127_7203336_13	485918.Cpin_1875	1.153e-179	578.0	COG3049@1|root,COG3049@2|Bacteria,4PKMY@976|Bacteroidetes,1J0M9@117747|Sphingobacteriia	976|Bacteroidetes	M	Acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase	-	-	-	-	-	-	-	-	-	-	-	-	AAT
BYD3_k127_7203336_12	926562.Oweho_1210	1.249e-181	581.0	COG1233@1|root,COG1233@2|Bacteria,4NG5Y@976|Bacteroidetes,1HZF6@117743|Flavobacteriia,2PABI@246874|Cryomorphaceae	976|Bacteroidetes	Q	Flavin containing amine oxidoreductase	-	-	1.3.99.23	ko:K09516	ko00830,map00830	-	R07163	RC01835	ko00000,ko00001,ko01000	-	-	-	Amino_oxidase,NAD_binding_8
BYD3_k127_7203336_1	929713.NIASO_17965	0.0	1209.0	COG0204@1|root,COG2227@1|root,COG4258@1|root,COG0204@2|Bacteria,COG2227@2|Bacteria,COG4258@2|Bacteria,4PKBM@976|Bacteroidetes,1IQPB@117747|Sphingobacteriia	976|Bacteroidetes	I	Phosphate acyltransferases	-	-	-	ko:K07003	-	-	-	-	ko00000	-	-	-	Acyltransferase,MMPL,Methyltransf_25,Methyltransf_31
BYD3_k127_7203336_95	1229487.AMYW01000015_gene2362	5.776e-13	74.0	COG3216@1|root,COG3216@2|Bacteria,4PM0N@976|Bacteroidetes,1IJIC@117743|Flavobacteriia	976|Bacteroidetes	S	Uncharacterized protein conserved in bacteria (DUF2062)	-	-	-	-	-	-	-	-	-	-	-	-	DUF2062,Glycos_transf_2
BYD3_k127_7203336_49	1197477.IA57_04700	4.115e-97	324.0	COG1216@1|root,COG3216@1|root,COG1216@2|Bacteria,COG3216@2|Bacteria,4NETR@976|Bacteroidetes,1HY3M@117743|Flavobacteriia	976|Bacteroidetes	M	Glycosyl transferase family 2	-	-	-	-	-	-	-	-	-	-	-	-	Acyltransferase,DUF2062,Glycos_transf_2
BYD3_k127_7203336_88	929713.NIASO_13470	6.04e-24	105.0	COG0764@1|root,COG0764@2|Bacteria,4NSGQ@976|Bacteroidetes	976|Bacteroidetes	I	dehydratase	fabZ	-	4.2.1.59	ko:K02372	ko00061,ko00780,ko01100,ko01212,map00061,map00780,map01100,map01212	M00083,M00572	R04428,R04535,R04537,R04544,R04568,R04954,R04965,R07764,R10117,R10121	RC00831,RC01095	ko00000,ko00001,ko00002,ko01000,ko01004	-	-	-	FabA
BYD3_k127_7203336_60	485918.Cpin_1869	8.6e-60	213.0	COG2834@1|root,COG2834@2|Bacteria,4NT30@976|Bacteroidetes,1IU2D@117747|Sphingobacteriia	976|Bacteroidetes	M	Outer membrane lipoprotein carrier protein LolA	lolA	-	-	ko:K03634	-	-	-	-	ko00000	-	-	-	LolA
BYD3_k127_7203336_66	929713.NIASO_13485	1.601e-52	195.0	COG0726@1|root,COG0726@2|Bacteria,4NM7D@976|Bacteroidetes,1ISZA@117747|Sphingobacteriia	976|Bacteroidetes	G	Polysaccharide deacetylase	pgdA	-	3.5.1.104	ko:K22278	-	-	-	-	ko00000,ko01000	-	-	-	DUF3298,Polysacc_deac_1
BYD3_k127_7203336_50	485918.Cpin_1867	1.04e-88	304.0	COG0304@1|root,COG0304@2|Bacteria,4NEU6@976|Bacteroidetes,1ISE9@117747|Sphingobacteriia	976|Bacteroidetes	IQ	Beta-ketoacyl synthase, N-terminal domain	-	-	-	-	-	-	-	-	-	-	-	-	Ketoacyl-synt_2,ketoacyl-synt
BYD3_k127_7203336_29	929713.NIASO_13495	1.335e-140	458.0	COG0304@1|root,COG0304@2|Bacteria,4NFC8@976|Bacteroidetes,1IRGP@117747|Sphingobacteriia	976|Bacteroidetes	IQ	Belongs to the beta-ketoacyl-ACP synthases family	-	-	2.3.1.41	ko:K00647	ko00061,ko00780,ko01100,ko01212,map00061,map00780,map01100,map01212	M00083,M00572	R04355,R04726,R04952,R04957,R04960,R04963,R04968,R07762,R10115,R10119	RC00039,RC02728,RC02729,RC02888	ko00000,ko00001,ko00002,ko01000,ko01004	-	-	-	Ketoacyl-synt_C,ketoacyl-synt
BYD3_k127_7203336_80	485918.Cpin_1865	2.828e-31	124.0	COG0236@1|root,COG0236@2|Bacteria,4NSFU@976|Bacteroidetes,1ITV3@117747|Sphingobacteriia	976|Bacteroidetes	IQ	Phosphopantetheine attachment site	acpP2	-	-	ko:K02078	-	-	-	-	ko00000,ko00001	-	-	-	PP-binding
BYD3_k127_7203336_72	485918.Cpin_1864	1.398e-45	172.0	COG0304@1|root,COG0304@2|Bacteria,4NMSI@976|Bacteroidetes,1ITHW@117747|Sphingobacteriia	976|Bacteroidetes	IQ	3-oxoacyl-ACP synthase	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_7203336_16	485918.Cpin_1863	6.714e-174	554.0	COG0644@1|root,COG0644@2|Bacteria,4NEI6@976|Bacteroidetes,1INQ3@117747|Sphingobacteriia	976|Bacteroidetes	C	Tryptophan halogenase	fixC	-	-	-	-	-	-	-	-	-	-	-	Trp_halogenase
BYD3_k127_7203336_32	929713.NIASO_13520	4.304e-134	435.0	COG0500@1|root,COG2226@2|Bacteria,4NGN8@976|Bacteroidetes,1IUWM@117747|Sphingobacteriia	976|Bacteroidetes	Q	O-methyltransferase	crtF	-	-	-	-	-	-	-	-	-	-	-	Methyltransf_2
BYD3_k127_7203336_47	929713.NIASO_13525	6.253e-99	335.0	COG0304@1|root,COG0304@2|Bacteria,4NE8K@976|Bacteroidetes,1IPY4@117747|Sphingobacteriia	976|Bacteroidetes	IQ	Belongs to the beta-ketoacyl-ACP synthases family	fabF2	-	2.3.1.41	ko:K00647	ko00061,ko00780,ko01100,ko01212,map00061,map00780,map01100,map01212	M00083,M00572	R04355,R04726,R04952,R04957,R04960,R04963,R04968,R07762,R10115,R10119	RC00039,RC02728,RC02729,RC02888	ko00000,ko00001,ko00002,ko01000,ko01004	-	-	-	Ketoacyl-synt_C,ketoacyl-synt
BYD3_k127_7203336_71	485918.Cpin_1860	1.262e-46	172.0	COG0824@1|root,COG0824@2|Bacteria,4NRHH@976|Bacteroidetes,1ITSJ@117747|Sphingobacteriia	976|Bacteroidetes	S	Thioesterase-like superfamily	-	-	-	ko:K07107	-	-	-	-	ko00000,ko01000	-	-	-	4HBT,4HBT_2
BYD3_k127_7203336_84	1121373.KB903621_gene1801	3.336e-27	119.0	2E7GE@1|root,331Z7@2|Bacteria,4NWN3@976|Bacteroidetes,47RY7@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_7203336_77	1122605.KB893647_gene250	1.337e-34	137.0	COG4706@1|root,COG4706@2|Bacteria,4NSB5@976|Bacteroidetes,1IU4J@117747|Sphingobacteriia	976|Bacteroidetes	I	dehydratase	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_7203336_42	485918.Cpin_1857	1.021e-105	350.0	COG4261@1|root,COG4261@2|Bacteria,4NF49@976|Bacteroidetes,1IT2S@117747|Sphingobacteriia	976|Bacteroidetes	S	Bacterial lipid A biosynthesis acyltransferase	-	-	-	-	-	-	-	-	-	-	-	-	Lip_A_acyltrans
BYD3_k127_7203336_83	153721.MYP_4252	3.745e-28	115.0	COG0236@1|root,COG0236@2|Bacteria,4NV57@976|Bacteroidetes,47SD1@768503|Cytophagia	976|Bacteroidetes	IQ	acyl carrier protein	acpP_2	-	-	ko:K02078	-	-	-	-	ko00000,ko00001	-	-	-	PP-binding
BYD3_k127_7203336_10	485918.Cpin_1855	1.064e-196	619.0	COG0304@1|root,COG0304@2|Bacteria,4NFBN@976|Bacteroidetes,1IR9V@117747|Sphingobacteriia	976|Bacteroidetes	IQ	Belongs to the beta-ketoacyl-ACP synthases family	fabB	-	2.3.1.41	ko:K00647	ko00061,ko00780,ko01100,ko01212,map00061,map00780,map01100,map01212	M00083,M00572	R04355,R04726,R04952,R04957,R04960,R04963,R04968,R07762,R10115,R10119	RC00039,RC02728,RC02729,RC02888	ko00000,ko00001,ko00002,ko01000,ko01004	-	-	-	Ketoacyl-synt_C,ketoacyl-synt
BYD3_k127_7203336_45	153721.MYP_4250	8.318e-102	336.0	COG1028@1|root,COG1028@2|Bacteria,4NFTU@976|Bacteroidetes,47N90@768503|Cytophagia	976|Bacteroidetes	IQ	KR domain	fabG3	-	1.1.1.100,1.1.1.36	ko:K00023,ko:K00059	ko00061,ko00333,ko00630,ko00650,ko00780,ko01040,ko01100,ko01120,ko01130,ko01200,ko01212,map00061,map00333,map00630,map00650,map00780,map01040,map01100,map01120,map01130,map01200,map01212	M00083,M00373,M00572	R01779,R01977,R04533,R04534,R04536,R04543,R04566,R04953,R04964,R07759,R07763,R10116,R10120,R11671	RC00029,RC00103,RC00117	ko00000,ko00001,ko00002,ko01000,ko01004	-	-	-	adh_short_C2
BYD3_k127_7203336_8	485918.Cpin_1853	2.471e-205	651.0	COG2986@1|root,COG2986@2|Bacteria,4NE0D@976|Bacteroidetes,1IQ55@117747|Sphingobacteriia	976|Bacteroidetes	E	Aromatic amino acid lyase	hutH	-	4.3.1.23,4.3.1.3	ko:K01745,ko:K10774	ko00340,ko00350,ko01100,map00340,map00350,map01100	M00045	R00737,R01168	RC00361	ko00000,ko00001,ko00002,ko01000	-	-	-	Lyase_aromatic
BYD3_k127_7203336_73	760192.Halhy_1730	1.041e-36	144.0	COG3495@1|root,COG3495@2|Bacteria,4NMZ8@976|Bacteroidetes	976|Bacteroidetes	S	Protein conserved in bacteria	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_7203336_33	1121904.ARBP01000007_gene2978	1.624e-133	437.0	COG0577@1|root,COG0577@2|Bacteria,4NF60@976|Bacteroidetes,47KE0@768503|Cytophagia	976|Bacteroidetes	V	ABC-type transport system involved in lipoprotein release permease component	-	-	-	ko:K02004	-	M00258	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	FtsX,MacB_PCD
BYD3_k127_7203336_59	1121904.ARBP01000033_gene3217	6.279e-60	214.0	COG1136@1|root,COG1136@2|Bacteria,4NNS2@976|Bacteroidetes,47MDH@768503|Cytophagia	976|Bacteroidetes	V	ABC-type antimicrobial peptide transport system, ATPase component	-	-	-	ko:K02003	-	M00258	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	ABC_tran
BYD3_k127_7203336_103	617140.AJZE01000079_gene1749	9.787e-05	45.0	COG3193@1|root,COG3193@2|Bacteria,1N5PP@1224|Proteobacteria,1SC3A@1236|Gammaproteobacteria,1XY13@135623|Vibrionales	135623|Vibrionales	S	Haem-degrading	-	-	-	-	-	-	-	-	-	-	-	-	Haem_degrading
BYD3_k127_7203336_36	1121904.ARBP01000005_gene4607	2.611e-117	386.0	COG3386@1|root,COG3386@2|Bacteria,4NIMX@976|Bacteroidetes,47KMQ@768503|Cytophagia	976|Bacteroidetes	G	PFAM SMP-30 Gluconolaconase	-	-	3.1.1.17	ko:K01053	ko00030,ko00053,ko00930,ko01100,ko01110,ko01120,ko01130,ko01200,ko01220,map00030,map00053,map00930,map01100,map01110,map01120,map01130,map01200,map01220	M00129	R01519,R02933,R03751	RC00537,RC00983	ko00000,ko00001,ko00002,ko01000,ko04147	-	-	-	SGL
BYD3_k127_7203336_35	1122605.KB893647_gene312	3.24e-130	423.0	COG0053@1|root,COG0053@2|Bacteria,4NEID@976|Bacteroidetes,1IP0G@117747|Sphingobacteriia	976|Bacteroidetes	P	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family	fieF	-	-	-	-	-	-	-	-	-	-	-	Cation_efflux,ZT_dimer
BYD3_k127_7203336_90	1117318.PRUB_06445	3.584e-22	100.0	COG1733@1|root,COG1733@2|Bacteria,1MZ6G@1224|Proteobacteria,1S941@1236|Gammaproteobacteria,2Q3JA@267888|Pseudoalteromonadaceae	1236|Gammaproteobacteria	K	transcriptional regulators	-	-	-	-	-	-	-	-	-	-	-	-	HxlR
BYD3_k127_7203336_3	1121904.ARBP01000003_gene6356	9.818e-256	838.0	COG0642@1|root,COG0745@1|root,COG3292@1|root,COG0745@2|Bacteria,COG2205@2|Bacteria,COG3292@2|Bacteria,4NDXU@976|Bacteroidetes,47JBS@768503|Cytophagia	976|Bacteroidetes	T	Two component regulator propeller	-	-	-	-	-	-	-	-	-	-	-	-	HATPase_c,HTH_18,HisKA,Reg_prop,Response_reg,Y_Y_Y
BYD3_k127_7203336_4	929703.KE386491_gene13	4.395e-244	804.0	COG0745@1|root,COG3292@1|root,COG5002@1|root,COG0745@2|Bacteria,COG3292@2|Bacteria,COG5002@2|Bacteria,4P0IA@976|Bacteroidetes,47Y22@768503|Cytophagia	976|Bacteroidetes	T	Histidine kinase	-	-	-	-	-	-	-	-	-	-	-	-	HATPase_c,HTH_18,HisKA,Reg_prop,Response_reg,Y_Y_Y
BYD3_k127_7203336_101	762903.Pedsa_0074	2.435e-05	51.0	COG3391@1|root,COG3391@2|Bacteria,4NNEF@976|Bacteroidetes	976|Bacteroidetes	M	NHL repeat	-	-	-	-	-	-	-	-	-	-	-	-	NHL,TIG
BYD3_k127_7206506_15	760192.Halhy_3187	7.003e-28	117.0	COG2885@1|root,COG2885@2|Bacteria,4P5MU@976|Bacteroidetes	976|Bacteroidetes	M	OmpA family	-	-	-	-	-	-	-	-	-	-	-	-	OmpA
BYD3_k127_7206506_0	1122179.KB890434_gene825	6.291e-222	699.0	COG1793@1|root,COG1793@2|Bacteria,4NEKP@976|Bacteroidetes,1IQCK@117747|Sphingobacteriia	976|Bacteroidetes	L	DNA ligase	lig	-	6.5.1.1,6.5.1.6,6.5.1.7	ko:K10747	ko03030,ko03410,ko03420,ko03430,map03030,map03410,map03420,map03430	-	R00381,R00382,R10822,R10823	RC00005	ko00000,ko00001,ko01000,ko03032,ko03400	-	-	-	DNA_ligase_A_C,DNA_ligase_A_M,DNA_ligase_A_N
BYD3_k127_7206506_3	1237149.C900_05703	7.644e-150	482.0	COG1236@1|root,COG1236@2|Bacteria,4NFN7@976|Bacteroidetes,47JDM@768503|Cytophagia	976|Bacteroidetes	J	exonuclease of the beta-lactamase fold involved in RNA processing	-	-	-	ko:K07577	-	-	-	-	ko00000	-	-	-	Lactamase_B
BYD3_k127_7206506_14	1237149.C900_04850	5.273e-30	127.0	COG2062@1|root,COG2062@2|Bacteria,4PMDV@976|Bacteroidetes,47Y2D@768503|Cytophagia	976|Bacteroidetes	T	Phosphoglycerate mutase family	-	-	-	-	-	-	-	-	-	-	-	-	His_Phos_1
BYD3_k127_7206506_9	1237149.C900_01567	8.291e-59	219.0	COG0457@1|root,COG2208@1|root,COG0457@2|Bacteria,COG2208@2|Bacteria,4NUFW@976|Bacteroidetes	976|Bacteroidetes	KT	COGs COG2208 Serine phosphatase RsbU regulator of sigma subunit	-	-	-	-	-	-	-	-	-	-	-	-	SpoIIE,TPR_12
BYD3_k127_7206506_8	1237149.C900_01610	7.75e-68	235.0	COG1331@1|root,COG1331@2|Bacteria,4PKPW@976|Bacteroidetes,47XYJ@768503|Cytophagia	976|Bacteroidetes	O	Protein of unknown function, DUF255	-	-	-	-	-	-	-	-	-	-	-	-	Thioredox_DsbH,Thioredoxin_2,Thioredoxin_7
BYD3_k127_7206506_10	1124780.ANNU01000008_gene2728	2.784e-52	192.0	COG0727@1|root,COG0727@2|Bacteria,4NMJ0@976|Bacteroidetes,47PTF@768503|Cytophagia	976|Bacteroidetes	S	Putative zinc- or iron-chelating domain	-	-	-	-	-	-	-	-	-	-	-	-	CxxCxxCC
BYD3_k127_7206506_12	1121904.ARBP01000006_gene3767	1.255e-40	155.0	COG3631@1|root,COG3631@2|Bacteria,4NQGX@976|Bacteroidetes,47R4P@768503|Cytophagia	976|Bacteroidetes	S	SnoaL-like domain	-	-	-	-	-	-	-	-	-	-	-	-	SnoaL_2
BYD3_k127_7206506_18	1047013.AQSP01000144_gene885	2.413e-08	64.0	2B2YN@1|root,31VJM@2|Bacteria	2|Bacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_7206506_4	485918.Cpin_5524	1.042e-113	375.0	COG2220@1|root,COG2220@2|Bacteria,4NI69@976|Bacteroidetes,1IXHX@117747|Sphingobacteriia	976|Bacteroidetes	S	Beta-lactamase superfamily domain	-	-	-	-	-	-	-	-	-	-	-	-	Lactamase_B_2
BYD3_k127_7206506_13	378806.STAUR_8011	1.192e-31	127.0	2CP0Z@1|root,32SI8@2|Bacteria,1RK5X@1224|Proteobacteria,434SF@68525|delta/epsilon subdivisions,2X904@28221|Deltaproteobacteria,2Z0HI@29|Myxococcales	28221|Deltaproteobacteria	S	Protein of unknown function (DUF3037)	-	-	-	-	-	-	-	-	-	-	-	-	DUF3037
BYD3_k127_7206506_5	485917.Phep_2278	8.264e-112	368.0	COG1718@1|root,COG1718@2|Bacteria,4NEF6@976|Bacteroidetes,1IPMV@117747|Sphingobacteriia	976|Bacteroidetes	DT	aminotransferase class I and II	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_7206506_11	926549.KI421517_gene426	1.67e-44	165.0	2E4RV@1|root,32ZKD@2|Bacteria,4NWUE@976|Bacteroidetes,47W7C@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_7206506_2	1123248.KB893381_gene971	5.346e-168	537.0	COG0673@1|root,COG0673@2|Bacteria,4P1NH@976|Bacteroidetes	976|Bacteroidetes	S	Oxidoreductase family, NAD-binding Rossmann fold	-	-	-	-	-	-	-	-	-	-	-	-	GFO_IDH_MocA
BYD3_k127_7206506_17	1321779.HMPREF1984_01171	4.713e-12	76.0	COG2220@1|root,COG2220@2|Bacteria,379IX@32066|Fusobacteria	32066|Fusobacteria	S	Psort location Cytoplasmic, score 9.97	-	-	-	ko:K03476	ko00053,ko01100,ko01120,map00053,map01100,map01120	M00550	R07677	RC02793	ko00000,ko00001,ko00002,ko01000	-	-	-	Lactamase_B_3
BYD3_k127_7206506_6	1348583.ATLH01000022_gene2347	5.156e-84	285.0	COG1028@1|root,COG1028@2|Bacteria,4NIDQ@976|Bacteroidetes,1HYDU@117743|Flavobacteriia	976|Bacteroidetes	IQ	Dehydrogenase	-	-	1.1.1.100	ko:K00059	ko00061,ko00333,ko00780,ko01040,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01040,map01100,map01130,map01212	M00083,M00572	R04533,R04534,R04536,R04543,R04566,R04953,R04964,R07759,R07763,R10116,R10120,R11671	RC00029,RC00117	ko00000,ko00001,ko00002,ko01000,ko01004	-	-	-	adh_short_C2
BYD3_k127_7206506_7	926549.KI421517_gene1741	2.93e-68	237.0	COG2010@1|root,COG2010@2|Bacteria,4NQXA@976|Bacteroidetes,47QS4@768503|Cytophagia	976|Bacteroidetes	C	Cytochrome c	-	-	-	-	-	-	-	-	-	-	-	-	Cytochrom_C
BYD3_k127_7206506_16	1338011.BD94_1900	3.342e-26	121.0	COG2207@1|root,COG2207@2|Bacteria,4NEEQ@976|Bacteroidetes,1HWW5@117743|Flavobacteriia,34QFB@308865|Elizabethkingia	976|Bacteroidetes	K	helix_turn_helix, arabinose operon control protein	pchR	-	-	-	-	-	-	-	-	-	-	-	HTH_18
BYD3_k127_7206506_1	1123248.KB893317_gene4292	2.088e-191	602.0	COG0613@1|root,COG0613@2|Bacteria,4PN3D@976|Bacteroidetes	976|Bacteroidetes	S	PHP domain protein	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_723789_8	760192.Halhy_6327	2.884e-187	594.0	COG2132@1|root,COG2132@2|Bacteria,4NE3N@976|Bacteroidetes,1IWFY@117747|Sphingobacteriia	976|Bacteroidetes	Q	Multicopper oxidase	-	-	-	-	-	-	-	-	-	-	-	-	Cu-oxidase,Cu-oxidase_2,Cu-oxidase_3
BYD3_k127_723789_6	929562.Emtol_1017	5.323e-208	649.0	COG0673@1|root,COG0673@2|Bacteria,4NEC6@976|Bacteroidetes,47KZS@768503|Cytophagia	976|Bacteroidetes	S	PFAM Oxidoreductase family, NAD-binding Rossmann fold	-	-	-	-	-	-	-	-	-	-	-	-	GFO_IDH_MocA
BYD3_k127_723789_15	313603.FB2170_12071	6.267e-106	348.0	28IRY@1|root,2Z8R6@2|Bacteria,4NIMI@976|Bacteroidetes	976|Bacteroidetes	S	Domain of Unknown Function (DUF1080)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1080
BYD3_k127_723789_7	1123248.KB893329_gene4433	3.107e-188	596.0	COG0673@1|root,COG0673@2|Bacteria,4NF9M@976|Bacteroidetes,1IR8X@117747|Sphingobacteriia	976|Bacteroidetes	S	Oxidoreductase family, NAD-binding Rossmann fold	-	-	-	-	-	-	-	-	-	-	-	-	GFO_IDH_MocA
BYD3_k127_723789_2	69279.BG36_13100	1.244e-275	862.0	COG0465@1|root,COG0465@2|Bacteria,1MU6J@1224|Proteobacteria,2TSYQ@28211|Alphaproteobacteria,43I8J@69277|Phyllobacteriaceae	28211|Alphaproteobacteria	O	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins	-	-	-	ko:K03798	-	M00742	-	-	ko00000,ko00002,ko01000,ko01002,ko03110	-	-	-	AAA,FtsH_ext,Peptidase_M41
BYD3_k127_723789_18	1166018.FAES_4422	7.168e-28	119.0	2E32S@1|root,32Y2Z@2|Bacteria,4NW5U@976|Bacteroidetes,47RTP@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_723789_20	1123226.KB899288_gene1031	1.104e-18	91.0	COG4876@1|root,COG4876@2|Bacteria,1V4YD@1239|Firmicutes,4HIK1@91061|Bacilli,26Z42@186822|Paenibacillaceae	91061|Bacilli	S	protein conserved in bacteria	ydaT	-	-	-	-	-	-	-	-	-	-	-	DUF2188
BYD3_k127_723789_3	1237149.C900_04930	4.375e-236	747.0	COG5368@1|root,COG5368@2|Bacteria,4NE34@976|Bacteroidetes,47M1C@768503|Cytophagia	976|Bacteroidetes	S	protein conserved in bacteria	-	-	-	-	-	-	-	-	-	-	-	-	Big_5,DUF3131,Glycoamylase
BYD3_k127_723789_13	1239962.C943_02205	7.332e-135	438.0	COG3507@1|root,COG3507@2|Bacteria,4PPR5@976|Bacteroidetes,47YQS@768503|Cytophagia	976|Bacteroidetes	G	Concanavalin A-like lectin/glucanases superfamily	-	-	-	-	-	-	-	-	-	-	-	-	Laminin_G_3
BYD3_k127_723789_4	927658.AJUM01000022_gene1226	4.468e-224	704.0	COG0446@1|root,COG0446@2|Bacteria,4NER5@976|Bacteroidetes,2FPRQ@200643|Bacteroidia,3XJPV@558415|Marinilabiliaceae	976|Bacteroidetes	S	SusD family	-	-	-	ko:K21572	-	-	-	-	ko00000,ko02000	8.A.46.1,8.A.46.3	-	-	SusD-like_3,SusD_RagB
BYD3_k127_723789_0	927658.AJUM01000022_gene1227	0.0	1301.0	COG1629@1|root,COG1629@2|Bacteria,4NDXS@976|Bacteroidetes,2FKYX@200643|Bacteroidia,3XIT2@558415|Marinilabiliaceae	976|Bacteroidetes	P	Carboxypeptidase regulatory-like domain	-	-	-	-	-	-	-	-	-	-	-	-	CarbopepD_reg_2,Plug,TonB_dep_Rec
BYD3_k127_723789_9	926556.Echvi_2496	2.109e-183	593.0	COG3677@1|root,COG3677@2|Bacteria,4NFWV@976|Bacteroidetes,47MV7@768503|Cytophagia	976|Bacteroidetes	L	7TMR-DISM extracellular 2	-	-	-	ko:K20971	ko02025,map02025	-	-	-	ko00000,ko00001,ko01001,ko02022	-	-	-	7TMR-DISMED2,7TMR-DISM_7TM,Zn_Tnp_IS1595
BYD3_k127_723789_17	385682.AFSL01000004_gene956	3.812e-40	156.0	COG0845@1|root,COG0845@2|Bacteria,4NG8S@976|Bacteroidetes,2FMQN@200643|Bacteroidia,3XIS8@558415|Marinilabiliaceae	976|Bacteroidetes	M	Protein of unknown function (DUF3347)	-	-	-	ko:K07798	ko02020,map02020	-	-	-	ko00000,ko00001,ko02000	2.A.6.1.4,8.A.1	-	-	DUF3347,HMA,HlyD_D23
BYD3_k127_723789_19	700598.Niako_2235	1.616e-19	89.0	COG2608@1|root,COG2608@2|Bacteria,4NURN@976|Bacteroidetes,1IUGG@117747|Sphingobacteriia	976|Bacteroidetes	P	PFAM Heavy-metal-associated domain	-	-	-	-	-	-	-	-	-	-	-	-	HMA
BYD3_k127_723789_1	1237149.C900_02412	0.0	1041.0	COG2217@1|root,COG2217@2|Bacteria,4NERS@976|Bacteroidetes,47MMN@768503|Cytophagia	976|Bacteroidetes	P	ATPase, P-type (transporting), HAD superfamily, subfamily IC	-	-	3.6.3.4,3.6.3.54	ko:K01533,ko:K17686	ko01524,ko04016,map01524,map04016	-	R00086	RC00002	ko00000,ko00001,ko01000	3.A.3.5	-	-	E1-E2_ATPase,HMA,Hydrolase
BYD3_k127_723789_16	1237149.C900_02411	4.113e-76	259.0	COG2207@1|root,COG2207@2|Bacteria,4NM5G@976|Bacteroidetes,47QJ8@768503|Cytophagia	976|Bacteroidetes	K	PFAM Bacterial regulatory helix-turn-helix proteins, AraC family	-	-	-	-	-	-	-	-	-	-	-	-	HTH_18
BYD3_k127_723789_11	929556.Solca_1695	6.051e-169	537.0	COG0389@1|root,COG0389@2|Bacteria,4NF1Y@976|Bacteroidetes,1IP49@117747|Sphingobacteriia	976|Bacteroidetes	L	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII	dinB	-	2.7.7.7	ko:K02346	-	-	-	-	ko00000,ko01000,ko03400	-	-	-	IMS,IMS_C,IMS_HHH
BYD3_k127_723789_14	1121904.ARBP01000011_gene1562	2.885e-108	357.0	COG2220@1|root,COG2220@2|Bacteria,4NFJ4@976|Bacteroidetes,47JCF@768503|Cytophagia	976|Bacteroidetes	S	Beta-lactamase superfamily domain	-	-	-	-	-	-	-	-	-	-	-	-	Lactamase_B_3
BYD3_k127_723789_10	1047013.AQSP01000134_gene1348	2.983e-171	565.0	COG0577@1|root,COG0577@2|Bacteria	2|Bacteria	V	efflux transmembrane transporter activity	-	-	-	ko:K02004	-	M00258	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	FtsX,MacB_PCD
BYD3_k127_723789_12	1122621.ATZA01000039_gene2599	1.593e-160	533.0	COG0577@1|root,COG0577@2|Bacteria,4NDUK@976|Bacteroidetes,1INSB@117747|Sphingobacteriia	976|Bacteroidetes	V	TIGRFAM Acidobacterial duplicated orphan permease	-	-	-	ko:K02004	-	M00258	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	FtsX,MacB_PCD
BYD3_k127_723789_5	1237149.C900_03827	2.372e-219	704.0	COG0577@1|root,COG0577@2|Bacteria,4NDUK@976|Bacteroidetes,47JJN@768503|Cytophagia	976|Bacteroidetes	V	FtsX-like permease family	-	-	-	-	-	-	-	-	-	-	-	-	FtsX,MacB_PCD
BYD3_k127_7247790_0	1185876.BN8_01454	2.334e-302	947.0	COG0577@1|root,COG0577@2|Bacteria,4NDUK@976|Bacteroidetes,47JJN@768503|Cytophagia	976|Bacteroidetes	V	FtsX-like permease family	-	-	-	-	-	-	-	-	-	-	-	-	FtsX,MacB_PCD
BYD3_k127_7247790_1	1317122.ATO12_15435	4.445e-43	160.0	COG0454@1|root,COG0454@2|Bacteria,4NPMJ@976|Bacteroidetes,1I2CX@117743|Flavobacteriia,2YJ85@290174|Aquimarina	976|Bacteroidetes	K	Acetyltransferase (GNAT) domain	-	-	-	-	-	-	-	-	-	-	-	-	Acetyltransf_1
BYD3_k127_7279178_1	485918.Cpin_6703	8.165e-36	140.0	COG1733@1|root,COG1733@2|Bacteria,4NV02@976|Bacteroidetes,1IZ34@117747|Sphingobacteriia	976|Bacteroidetes	K	HxlR-like helix-turn-helix	-	-	-	-	-	-	-	-	-	-	-	-	HxlR
BYD3_k127_7279178_0	616991.JPOO01000003_gene2015	8.222e-136	438.0	COG2010@1|root,COG2010@2|Bacteria,4PMA9@976|Bacteroidetes,1HXRI@117743|Flavobacteriia,23GCK@178469|Arenibacter	976|Bacteroidetes	C	Domain of Unknown Function (DUF1080)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1080
BYD3_k127_7304968_22	1227739.Hsw_1585	7.005e-46	172.0	2CBRE@1|root,31J72@2|Bacteria,4NS59@976|Bacteroidetes	976|Bacteroidetes	S	DinB superfamily	-	-	-	-	-	-	-	-	-	-	-	-	DinB_2
BYD3_k127_7304968_4	1237149.C900_00840	9.386e-201	651.0	COG0577@1|root,COG0577@2|Bacteria,4NDUK@976|Bacteroidetes,47JJN@768503|Cytophagia	976|Bacteroidetes	V	FtsX-like permease family	-	-	-	-	-	-	-	-	-	-	-	-	FtsX,MacB_PCD
BYD3_k127_7304968_13	1185876.BN8_01413	1.504e-94	319.0	COG4319@1|root,COG4319@2|Bacteria,4P8P0@976|Bacteroidetes	976|Bacteroidetes	S	ketosteroid isomerase	-	-	-	-	-	-	-	-	-	-	-	-	DUF4440
BYD3_k127_7304968_11	1185876.BN8_01414	3.894e-121	400.0	COG2382@1|root,COG2382@2|Bacteria	2|Bacteria	P	enterobactin catabolic process	-	-	-	ko:K07214	-	-	-	-	ko00000	-	-	-	Esterase
BYD3_k127_7304968_31	266265.Bxe_A1849	6.966e-15	80.0	COG2197@1|root,COG2197@2|Bacteria,1NDQC@1224|Proteobacteria,2VVNY@28216|Betaproteobacteria,1K970@119060|Burkholderiaceae	28216|Betaproteobacteria	T	Pfam Response regulator receiver	-	-	-	-	-	-	-	-	-	-	-	-	Response_reg
BYD3_k127_7304968_15	865937.Gilli_3441	2.069e-75	258.0	COG2197@1|root,COG2197@2|Bacteria,4NM2A@976|Bacteroidetes,1I0B0@117743|Flavobacteriia	976|Bacteroidetes	KT	Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain	-	-	-	-	-	-	-	-	-	-	-	-	GerE,Response_reg
BYD3_k127_7304968_14	1123248.KB893348_gene291	5.743e-80	295.0	COG4585@1|root,COG5002@1|root,COG4585@2|Bacteria,COG5002@2|Bacteria,4NG0M@976|Bacteroidetes,1IXEX@117747|Sphingobacteriia	976|Bacteroidetes	T	Histidine kinase	narQ	-	-	-	-	-	-	-	-	-	-	-	HATPase_c,HisKA_3,PAS_9,PilJ
BYD3_k127_7304968_23	1341181.FLJC2902T_30570	6.675e-45	186.0	COG4251@1|root,COG4251@2|Bacteria,4NN2W@976|Bacteroidetes,1I2J2@117743|Flavobacteriia,2P0F6@237|Flavobacterium	976|Bacteroidetes	T	His Kinase A (phosphoacceptor) domain	-	-	-	-	-	-	-	-	-	-	-	-	DUF4154,HATPase_c,HisKA,PAS_9
BYD3_k127_7304968_1	1121904.ARBP01000072_gene282	1.935e-244	784.0	COG0577@1|root,COG0577@2|Bacteria,4NDUK@976|Bacteroidetes,47JJN@768503|Cytophagia	976|Bacteroidetes	V	FtsX-like permease family	-	-	-	-	-	-	-	-	-	-	-	-	FtsX,MacB_PCD
BYD3_k127_7304968_26	1121481.AUAS01000008_gene2900	9.565e-33	130.0	COG1695@1|root,COG1695@2|Bacteria,4NQJP@976|Bacteroidetes,47QWB@768503|Cytophagia	976|Bacteroidetes	K	Transcriptional regulator PadR-like family	-	-	-	-	-	-	-	-	-	-	-	-	PadR
BYD3_k127_7304968_10	643867.Ftrac_0866	3.302e-121	405.0	COG0793@1|root,COG0793@2|Bacteria,4NFKJ@976|Bacteroidetes,47MG1@768503|Cytophagia	976|Bacteroidetes	M	PFAM Peptidase S41	-	-	-	-	-	-	-	-	-	-	-	-	PDZ,PDZ_2,Peptidase_S41
BYD3_k127_7304968_29	1122138.AQUZ01000016_gene284	2.229e-23	103.0	COG4319@1|root,COG4319@2|Bacteria,2IMG5@201174|Actinobacteria	201174|Actinobacteria	S	Domain of unknown function (DUF4440)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4440
BYD3_k127_7304968_2	1121904.ARBP01000001_gene5324	2.566e-241	769.0	COG0577@1|root,COG0577@2|Bacteria,4NDUK@976|Bacteroidetes,47KTF@768503|Cytophagia	976|Bacteroidetes	V	MacB-like periplasmic core domain	-	-	-	ko:K02004	-	M00258	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	FtsX,MacB_PCD
BYD3_k127_7304968_24	1144313.PMI10_01743	3.132e-43	161.0	COG2259@1|root,31TV8@2|Bacteria,4NQJ7@976|Bacteroidetes,1I6FE@117743|Flavobacteriia,2NWFZ@237|Flavobacterium	976|Bacteroidetes	S	DoxX-like family	-	-	-	-	-	-	-	-	-	-	-	-	DoxX_2
BYD3_k127_7304968_21	485918.Cpin_4500	3.421e-57	203.0	COG3832@1|root,COG3832@2|Bacteria,4NSDK@976|Bacteroidetes,1ITI0@117747|Sphingobacteriia	976|Bacteroidetes	S	PFAM Activator of Hsp90 ATPase	-	-	-	-	-	-	-	-	-	-	-	-	AHSA1
BYD3_k127_7304968_5	1047013.AQSP01000095_gene2303	1.143e-165	549.0	COG0577@1|root,COG0577@2|Bacteria	2|Bacteria	V	efflux transmembrane transporter activity	-	-	-	ko:K02004	-	M00258	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	FtsX,MacB_PCD
BYD3_k127_7304968_25	1140002.I570_02778	1.429e-34	137.0	COG0454@1|root,COG0456@2|Bacteria,1V2GC@1239|Firmicutes	1239|Firmicutes	K	Acetyltransferase (GNAT) domain	-	-	-	-	-	-	-	-	-	-	-	-	Acetyltransf_1
BYD3_k127_7304968_18	1123248.KB893319_gene4015	2.705e-67	231.0	COG4122@1|root,COG4122@2|Bacteria,4NGQ1@976|Bacteroidetes,1IT5B@117747|Sphingobacteriia	976|Bacteroidetes	S	Methyltransferase domain	-	-	-	-	-	-	-	-	-	-	-	-	Methyltransf_24,Methyltransf_3
BYD3_k127_7304968_27	768704.Desmer_2210	3.189e-31	127.0	COG0454@1|root,COG1846@1|root,COG0456@2|Bacteria,COG1846@2|Bacteria,1UZW1@1239|Firmicutes,24DYA@186801|Clostridia	186801|Clostridia	K	transcriptional regulator	-	-	-	-	-	-	-	-	-	-	-	-	Acetyltransf_1,MarR,MarR_2
BYD3_k127_7304968_19	1237149.C900_01714	1.432e-64	225.0	COG0454@1|root,COG0456@2|Bacteria,4NR4J@976|Bacteroidetes,47VCN@768503|Cytophagia	976|Bacteroidetes	K	Acetyltransferase (GNAT) domain	-	-	-	-	-	-	-	-	-	-	-	-	Acetyltransf_1,Acetyltransf_7
BYD3_k127_7304968_28	1317122.ATO12_02705	9.167e-29	118.0	COG3295@1|root,COG3295@2|Bacteria,4NNGT@976|Bacteroidetes,1I36S@117743|Flavobacteriia,2YK9X@290174|Aquimarina	976|Bacteroidetes	S	Putative PepSY_TM-like	-	-	-	ko:K09939	-	-	-	-	ko00000	-	-	-	PepSY_TM_like_2
BYD3_k127_7304968_32	1034807.FBFL15_3041	3.255e-13	69.0	COG3295@1|root,COG3295@2|Bacteria,4NNGT@976|Bacteroidetes,1I36S@117743|Flavobacteriia,2NT6S@237|Flavobacterium	976|Bacteroidetes	S	Putative PepSY_TM-like	-	-	-	ko:K09939	-	-	-	-	ko00000	-	-	-	PepSY_TM_like_2
BYD3_k127_7304968_6	1121904.ARBP01000001_gene5599	6.791e-154	499.0	COG3119@1|root,COG3119@2|Bacteria,4NEM3@976|Bacteroidetes,47M3C@768503|Cytophagia	976|Bacteroidetes	P	PFAM sulfatase	-	-	-	-	-	-	-	-	-	-	-	-	Sulfatase
BYD3_k127_7304968_3	761193.Runsl_3076	6.93e-236	741.0	COG3119@1|root,COG3119@2|Bacteria,4NEZJ@976|Bacteroidetes,47NF5@768503|Cytophagia	976|Bacteroidetes	P	Sulfatase	-	-	-	-	-	-	-	-	-	-	-	-	Sulfatase
BYD3_k127_7304968_0	1185876.BN8_01998	0.0	1019.0	COG3408@1|root,COG3408@2|Bacteria,4NHST@976|Bacteroidetes,47KY3@768503|Cytophagia	976|Bacteroidetes	G	Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain	-	-	-	-	-	-	-	-	-	-	-	-	Bac_rhamnosid6H,Bac_rhamnosid_C
BYD3_k127_7304968_8	1123277.KB893195_gene5659	2.521e-132	432.0	COG2972@1|root,COG2972@2|Bacteria,4NIRC@976|Bacteroidetes,47RFE@768503|Cytophagia	976|Bacteroidetes	T	Histidine kinase	-	-	-	-	-	-	-	-	-	-	-	-	HATPase_c_5,His_kinase
BYD3_k127_7304968_12	1123277.KB893195_gene5658	2.232e-100	332.0	COG3279@1|root,COG3279@2|Bacteria,4NF8U@976|Bacteroidetes,47Q2C@768503|Cytophagia	976|Bacteroidetes	T	LytTr DNA-binding domain	-	-	-	-	-	-	-	-	-	-	-	-	LytTR,Response_reg
BYD3_k127_7304968_16	313606.M23134_03613	6.004e-73	271.0	COG2208@1|root,COG2208@2|Bacteria,4NYPG@976|Bacteroidetes,47UHH@768503|Cytophagia	976|Bacteroidetes	KT	Sigma factor PP2C-like phosphatases	-	-	-	-	-	-	-	-	-	-	-	-	7TMR-DISMED2,7TMR-DISM_7TM,SpoIIE
BYD3_k127_7304968_30	1168034.FH5T_10250	8.574e-17	95.0	COG5002@1|root,COG5002@2|Bacteria,4NETP@976|Bacteroidetes,2FKYG@200643|Bacteroidia	976|Bacteroidetes	T	ATPase histidine kinase DNA gyrase B HSP90 domain protein	-	-	2.7.13.3	ko:K02484,ko:K07636	ko02020,map02020	M00434	-	-	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	-	-	-	HATPase_c,HisKA
BYD3_k127_7304968_20	558152.IQ37_12340	5.518e-63	226.0	COG1680@1|root,COG1680@2|Bacteria,4NQF7@976|Bacteroidetes,1I2XA@117743|Flavobacteriia	976|Bacteroidetes	V	Domain of unknown function (DUF4440)	-	-	-	-	-	-	-	-	-	-	-	-	Beta-lactamase,DUF3471,DUF4440
BYD3_k127_7304968_17	1121129.KB903361_gene2998	4.542e-70	258.0	COG0312@1|root,COG0312@2|Bacteria,4P2UR@976|Bacteroidetes,2G330@200643|Bacteroidia	976|Bacteroidetes	S	Putative modulator of DNA gyrase	-	-	-	-	-	-	-	-	-	-	-	-	PmbA_TldD
BYD3_k127_7304968_7	682795.AciX8_2124	7.343e-144	475.0	COG0312@1|root,COG0312@2|Bacteria,3Y3MT@57723|Acidobacteria,2JKR9@204432|Acidobacteriia	57723|Acidobacteria	S	PFAM peptidase U62 modulator of DNA gyrase	-	-	-	-	-	-	-	-	-	-	-	-	PmbA_TldD
BYD3_k127_7304968_33	880073.Calab_3296	3.48e-07	63.0	COG0737@1|root,COG0737@2|Bacteria	2|Bacteria	F	nucleotide catabolic process	-	-	3.4.17.18	ko:K05996	-	-	-	-	ko00000,ko01000,ko01002	-	-	-	5_nucleotid_C,Cytochrome_C554,SBP_bac_8,SLH
BYD3_k127_7304968_9	545695.TREAZ_2513	4.073e-123	418.0	COG2730@1|root,COG2730@2|Bacteria,2J89M@203691|Spirochaetes	203691|Spirochaetes	G	Belongs to the glycosyl hydrolase 5 (cellulase A) family	-	-	3.2.1.4	ko:K01179	ko00500,ko01100,map00500,map01100	-	R06200,R11307,R11308	-	ko00000,ko00001,ko01000	-	GH5,GH9	-	Cellulase
BYD3_k127_7310768_3	471854.Dfer_1806	2.474e-224	721.0	COG0577@1|root,COG0577@2|Bacteria,4NJBI@976|Bacteroidetes,47MP8@768503|Cytophagia	976|Bacteroidetes	V	MacB-like periplasmic core domain	-	-	-	-	-	-	-	-	-	-	-	-	FtsX,MacB_PCD
BYD3_k127_7310768_0	929703.KE386491_gene1720	2.586e-308	967.0	COG0577@1|root,COG0577@2|Bacteria,4NDUK@976|Bacteroidetes	976|Bacteroidetes	V	permease	-	-	-	-	-	-	-	-	-	-	-	-	FtsX,MacB_PCD
BYD3_k127_7310768_15	1121373.KB903662_gene114	2.713e-68	237.0	COG0664@1|root,COG0664@2|Bacteria,4NM7X@976|Bacteroidetes,47PUN@768503|Cytophagia	976|Bacteroidetes	T	Cyclic nucleotide-binding domain	-	-	-	-	-	-	-	-	-	-	-	-	cNMP_binding
BYD3_k127_7310768_10	1121373.KB903662_gene101	1.305e-121	396.0	COG1741@1|root,COG1741@2|Bacteria,4NFZD@976|Bacteroidetes,47PJH@768503|Cytophagia	976|Bacteroidetes	S	Pirin C-terminal cupin domain	-	-	-	ko:K06911	-	-	-	-	ko00000	-	-	-	Pirin,Pirin_C
BYD3_k127_7310768_31	926549.KI421517_gene3327	1.178e-17	86.0	COG2085@1|root,COG2085@2|Bacteria,4NQ1G@976|Bacteroidetes,47Q30@768503|Cytophagia	976|Bacteroidetes	S	NADP oxidoreductase coenzyme F420-dependent	-	-	1.5.1.40	ko:K06988	-	-	-	-	ko00000,ko01000	-	-	-	F420_oxidored
BYD3_k127_7310768_26	504472.Slin_6559	7.573e-39	149.0	COG2085@1|root,COG2085@2|Bacteria,4NQ1G@976|Bacteroidetes,47Q30@768503|Cytophagia	976|Bacteroidetes	S	NADP oxidoreductase coenzyme F420-dependent	-	-	1.5.1.40	ko:K06988	-	-	-	-	ko00000,ko01000	-	-	-	F420_oxidored
BYD3_k127_7310768_30	1121104.AQXH01000004_gene74	8.296e-27	124.0	COG2207@1|root,COG2207@2|Bacteria,4NIJV@976|Bacteroidetes,1IT8Y@117747|Sphingobacteriia	976|Bacteroidetes	K	PFAM Bacterial regulatory helix-turn-helix proteins, AraC family	-	-	-	-	-	-	-	-	-	-	-	-	HTH_18
BYD3_k127_7310768_7	1121904.ARBP01000013_gene359	1.735e-170	541.0	COG3391@1|root,COG3391@2|Bacteria,4NH92@976|Bacteroidetes,47JVD@768503|Cytophagia	976|Bacteroidetes	S	NHL repeat containing protein	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_7310768_1	1121373.KB903627_gene2966	2.754e-254	818.0	COG0823@1|root,COG3227@1|root,COG0823@2|Bacteria,COG3227@2|Bacteria,4NF8H@976|Bacteroidetes,47MX4@768503|Cytophagia	976|Bacteroidetes	E	Thermolysin metallopeptidase, catalytic domain	npr	-	3.4.24.28	ko:K01400	-	-	-	-	ko00000,ko01000,ko01002	-	-	-	FTP,MAM,PepSY,Peptidase_M4,Peptidase_M4_C,fn3
BYD3_k127_7310768_34	1185876.BN8_00390	3.145e-07	58.0	2E13P@1|root,32WJ2@2|Bacteria,4NTGM@976|Bacteroidetes,47RAF@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_7310768_16	1121904.ARBP01000006_gene3852	1.178e-64	233.0	COG0726@1|root,COG0726@2|Bacteria,4NKYS@976|Bacteroidetes,47NF6@768503|Cytophagia	976|Bacteroidetes	G	PFAM Polysaccharide deacetylase	pgdA	-	-	-	-	-	-	-	-	-	-	-	Polysacc_deac_1
BYD3_k127_7310768_35	1250232.JQNJ01000001_gene1073	9.652e-06	51.0	2DG1V@1|root,2ZU42@2|Bacteria,4P88S@976|Bacteroidetes,1IB24@117743|Flavobacteriia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_7310768_32	755732.Fluta_3094	5.642e-14	75.0	2EHZ3@1|root,33BQJ@2|Bacteria,4NXH5@976|Bacteroidetes	976|Bacteroidetes	S	Kazal type serine protease inhibitors	-	-	-	-	-	-	-	-	-	-	-	-	Kazal_1
BYD3_k127_7310768_33	1123278.KB893405_gene61	1.656e-08	56.0	arCOG05125@1|root,2ZF8I@2|Bacteria,4NN14@976|Bacteroidetes,47PBX@768503|Cytophagia	976|Bacteroidetes	S	Family of unknown function (DUF5328)	-	-	-	-	-	-	-	-	-	-	-	-	DUF5328
BYD3_k127_7310768_24	1237149.C900_00650	1.644e-46	174.0	COG1943@1|root,COG1943@2|Bacteria,4NPWC@976|Bacteroidetes,47RHZ@768503|Cytophagia	976|Bacteroidetes	L	Transposase IS200 like	-	-	-	-	-	-	-	-	-	-	-	-	Y1_Tnp
BYD3_k127_7310768_17	700598.Niako_3908	2.801e-63	225.0	COG4270@1|root,COG4270@2|Bacteria	2|Bacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	DoxX
BYD3_k127_7310768_28	1122605.KB893631_gene3956	7.229e-32	128.0	COG4430@1|root,COG4430@2|Bacteria	2|Bacteria	F	Bacteriocin-protection, YdeI or OmpD-Associated	-	-	-	-	-	-	-	-	-	-	-	-	DUF1905,OmdA
BYD3_k127_7310768_8	1123248.KB893338_gene2306	2.008e-164	545.0	COG0577@1|root,COG0577@2|Bacteria,4NDUK@976|Bacteroidetes,1IRGG@117747|Sphingobacteriia	976|Bacteroidetes	V	MacB-like periplasmic core domain	-	-	-	-	-	-	-	-	-	-	-	-	FtsX,MacB_PCD
BYD3_k127_7310768_19	391603.FBALC1_04387	6.947e-57	210.0	2BWKA@1|root,32QZQ@2|Bacteria,4P163@976|Bacteroidetes,1I86M@117743|Flavobacteriia	976|Bacteroidetes	S	Concanavalin A-like lectin/glucanases superfamily	-	-	-	-	-	-	-	-	-	-	-	-	Laminin_G_3
BYD3_k127_7310768_13	886293.Sinac_1335	5.763e-91	305.0	COG1413@1|root,COG1413@2|Bacteria,2IYWU@203682|Planctomycetes	203682|Planctomycetes	C	Domain of Unknown Function (DUF1080)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1080
BYD3_k127_7310768_23	1121899.Q764_00085	2.755e-48	179.0	2F13Z@1|root,33U5E@2|Bacteria,4P2N4@976|Bacteroidetes,1I994@117743|Flavobacteriia,2NZ1J@237|Flavobacterium	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_7310768_6	388413.ALPR1_19733	9.983e-190	625.0	COG4206@1|root,COG4206@2|Bacteria,4P258@976|Bacteroidetes,47Y44@768503|Cytophagia	976|Bacteroidetes	P	PFAM TonB-dependent Receptor Plug	-	-	-	-	-	-	-	-	-	-	-	-	CarbopepD_reg_2,Plug,TonB_dep_Rec
BYD3_k127_7310768_9	1123277.KB893176_gene3706	3.786e-147	473.0	COG0823@1|root,COG0823@2|Bacteria,4NM2C@976|Bacteroidetes,47NM2@768503|Cytophagia	976|Bacteroidetes	U	Involved in the tonB-independent uptake of proteins	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_7310768_25	926549.KI421517_gene3211	1.064e-41	163.0	COG4103@1|root,COG4103@2|Bacteria,4NKIU@976|Bacteroidetes,47N38@768503|Cytophagia	976|Bacteroidetes	S	Tellurite resistance protein TerB	-	-	-	-	-	-	-	-	-	-	-	-	TerB
BYD3_k127_7310768_29	1168034.FH5T_08295	3.651e-31	124.0	COG2314@1|root,COG2314@2|Bacteria,4NU6E@976|Bacteroidetes	976|Bacteroidetes	S	TM2 domain	-	-	-	-	-	-	-	-	-	-	-	-	DUF4178,TM2
BYD3_k127_7310768_22	471854.Dfer_2112	1.538e-51	187.0	2BXJ3@1|root,32JAR@2|Bacteria,4NQKG@976|Bacteroidetes,47QDD@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	Lipocalin_5
BYD3_k127_7310768_21	1237149.C900_01341	1.028e-51	187.0	2DMJE@1|root,32RYR@2|Bacteria,4NQQI@976|Bacteroidetes,47QHM@768503|Cytophagia	976|Bacteroidetes	S	Domain of unknown function (DUF4112)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4112
BYD3_k127_7310768_27	1237149.C900_05502	3.653e-36	153.0	COG0793@1|root,COG0793@2|Bacteria,4NEF4@976|Bacteroidetes	976|Bacteroidetes	M	PDZ DHR GLGF domain protein	-	-	-	-	-	-	-	-	-	-	-	-	Asp_protease_2,PDZ,PDZ_2
BYD3_k127_7310768_2	1185876.BN8_02865	8.484e-253	805.0	COG0745@1|root,COG1956@1|root,COG5002@1|root,COG0745@2|Bacteria,COG1956@2|Bacteria,COG5002@2|Bacteria,4P0IA@976|Bacteroidetes,47YRP@768503|Cytophagia	976|Bacteroidetes	T	helix_turn_helix, arabinose operon control protein	-	-	-	-	-	-	-	-	-	-	-	-	GAF_2,HATPase_c,HTH_18,HisKA,Response_reg,TPR_10,TPR_12,TPR_7,TPR_8
BYD3_k127_7310768_20	272559.BF9343_2888	7.559e-56	200.0	COG4430@1|root,COG4430@2|Bacteria,4NQJJ@976|Bacteroidetes,2FSVY@200643|Bacteroidia,4ASQD@815|Bacteroidaceae	976|Bacteroidetes	S	Domain of unknown function (DUF1905)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1905,OmdA
BYD3_k127_7310768_18	1237149.C900_04298	3.744e-60	210.0	COG3832@1|root,COG3832@2|Bacteria,4NQ4A@976|Bacteroidetes,47QEP@768503|Cytophagia	976|Bacteroidetes	S	Activator of Hsp90 ATPase homolog 1-like protein	-	-	-	-	-	-	-	-	-	-	-	-	AHSA1
BYD3_k127_7310768_11	1121957.ATVL01000008_gene4412	1.02e-99	335.0	COG0657@1|root,COG0657@2|Bacteria,4NH62@976|Bacteroidetes,47JUA@768503|Cytophagia	976|Bacteroidetes	I	alpha/beta hydrolase fold	-	-	-	-	-	-	-	-	-	-	-	-	Abhydrolase_3,Peptidase_S9
BYD3_k127_7310768_14	700598.Niako_0425	6.635e-88	295.0	COG4122@1|root,COG4122@2|Bacteria,4NMF5@976|Bacteroidetes,1IWQE@117747|Sphingobacteriia	976|Bacteroidetes	S	O-methyltransferase	-	-	-	-	-	-	-	-	-	-	-	-	Methyltransf_3
BYD3_k127_7310768_4	1239962.C943_02207	4.537e-217	680.0	COG5368@1|root,COG5368@2|Bacteria,4NE34@976|Bacteroidetes,47P3I@768503|Cytophagia	976|Bacteroidetes	S	protein conserved in bacteria	-	-	-	-	-	-	-	-	-	-	-	-	DUF3131,Glycoamylase
BYD3_k127_7310768_12	1185876.BN8_01714	9.744e-99	325.0	COG1387@1|root,COG1387@2|Bacteria,4NMBC@976|Bacteroidetes,47PG3@768503|Cytophagia	976|Bacteroidetes	E	Domain of Unknown Function (DUF1080)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1080
BYD3_k127_7310768_5	1123248.KB893317_gene4292	4.876e-201	636.0	COG0613@1|root,COG0613@2|Bacteria,4PN3D@976|Bacteroidetes	976|Bacteroidetes	S	PHP domain protein	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_7404751_6	1144313.PMI10_00718	0.0006629	48.0	COG3386@1|root,COG3386@2|Bacteria,4PKCK@976|Bacteroidetes,1IJ7K@117743|Flavobacteriia,2P0KA@237|Flavobacterium	976|Bacteroidetes	G	cell adhesion involved in biofilm formation	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_7404751_0	1239962.C943_00110	5.423e-259	809.0	COG2274@1|root,COG2274@2|Bacteria,4NE19@976|Bacteroidetes,47MDS@768503|Cytophagia	976|Bacteroidetes	V	ABC transporter transmembrane region	-	-	-	ko:K11085	ko02010,map02010	-	-	-	ko00000,ko00001,ko01000,ko02000	3.A.1.106	-	-	ABC_membrane,ABC_tran,Peptidase_C39
BYD3_k127_7404751_3	1120968.AUBX01000009_gene653	1.216e-97	327.0	COG1738@1|root,COG1738@2|Bacteria,4NFP3@976|Bacteroidetes,47J8X@768503|Cytophagia	976|Bacteroidetes	S	Involved in the import of queuosine (Q) precursors, required for Q precursor salvage	-	-	-	ko:K09125	-	-	-	-	ko00000	-	-	-	Vut_1
BYD3_k127_7404751_2	1237149.C900_04769	4.882e-114	375.0	COG1234@1|root,COG1234@2|Bacteria,4NE1K@976|Bacteroidetes,47KGX@768503|Cytophagia	976|Bacteroidetes	S	Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA	rnz	GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004540,GO:0006139,GO:0006396,GO:0006399,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0031123,GO:0034414,GO:0034470,GO:0034641,GO:0034660,GO:0042779,GO:0042780,GO:0042781,GO:0043170,GO:0043628,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0140098,GO:1901360,GO:1905267	3.1.26.11	ko:K00784	ko03013,map03013	-	-	-	ko00000,ko00001,ko01000,ko03016	-	-	-	Lactamase_B_2
BYD3_k127_7404751_5	1237149.C900_04768	2.3e-57	201.0	COG1366@1|root,COG1366@2|Bacteria,4NTPB@976|Bacteroidetes,47R1F@768503|Cytophagia	976|Bacteroidetes	T	Belongs to the anti-sigma-factor antagonist family	-	-	-	-	-	-	-	-	-	-	-	-	STAS,STAS_2
BYD3_k127_7404751_1	1237149.C900_04767	5.769e-147	473.0	COG0152@1|root,COG0152@2|Bacteria,4NF1Z@976|Bacteroidetes,47JZR@768503|Cytophagia	976|Bacteroidetes	F	PFAM SAICAR synthetase	purC	GO:0003674,GO:0003824,GO:0004639,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006163,GO:0006164,GO:0006188,GO:0006189,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0016881,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046040,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576	6.3.2.6	ko:K01923	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	M00048	R04591	RC00064,RC00162	ko00000,ko00001,ko00002,ko01000	-	-	-	SAICAR_synt
BYD3_k127_7404751_4	643867.Ftrac_1201	1.237e-90	314.0	COG2849@1|root,COG2849@2|Bacteria,4NMDX@976|Bacteroidetes,47PSU@768503|Cytophagia	976|Bacteroidetes	S	PFAM MORN repeat variant	-	-	-	-	-	-	-	-	-	-	-	-	MORN_2
BYD3_k127_7488398_11	688270.Celal_0522	0.0004664	51.0	2BE7I@1|root,327YH@2|Bacteria,4NRWF@976|Bacteroidetes,1I3FF@117743|Flavobacteriia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_7488398_9	314345.SPV1_06274	4.02e-10	70.0	2CYQJ@1|root,32T4M@2|Bacteria	2|Bacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_7488398_2	376686.Fjoh_4288	3.43e-56	205.0	2ATKF@1|root,32ZIE@2|Bacteria,4P2ZR@976|Bacteroidetes,1I926@117743|Flavobacteriia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_7488398_7	203122.Sde_2333	2.35e-26	119.0	COG0457@1|root,COG0457@2|Bacteria,1QWQ0@1224|Proteobacteria,1T31X@1236|Gammaproteobacteria	1236|Gammaproteobacteria	S	Protein of unknown function (DUF2971)	-	-	-	-	-	-	-	-	-	-	-	-	DUF2971
BYD3_k127_7488398_5	1121931.AUHG01000012_gene2484	2.973e-36	147.0	2DMD5@1|root,32NXB@2|Bacteria	2|Bacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_7488398_3	1121887.AUDK01000014_gene2477	1.389e-40	151.0	COG4974@1|root,COG4974@2|Bacteria,4NX3Q@976|Bacteroidetes,1HXCN@117743|Flavobacteriia,2NTGV@237|Flavobacterium	976|Bacteroidetes	L	Belongs to the 'phage' integrase family	-	-	-	-	-	-	-	-	-	-	-	-	Arm-DNA-bind_5,Phage_int_SAM_5,Phage_integrase
BYD3_k127_7488398_6	1123248.KB893317_gene4412	5.079e-28	119.0	COG0582@1|root,COG0582@2|Bacteria,4NDZJ@976|Bacteroidetes	976|Bacteroidetes	L	Belongs to the 'phage' integrase family	-	-	-	-	-	-	-	-	-	-	-	-	Arm-DNA-bind_5,Phage_int_SAM_5,Phage_integrase
BYD3_k127_7488398_4	1408433.JHXV01000005_gene2462	2.671e-39	152.0	2E5WH@1|root,30K07@2|Bacteria,4P5HE@976|Bacteroidetes,1ICRB@117743|Flavobacteriia,2PBVH@246874|Cryomorphaceae	976|Bacteroidetes	J	23S rRNA-intervening sequence protein	-	-	-	-	-	-	-	-	-	-	-	-	23S_rRNA_IVP
BYD3_k127_7488398_1	700598.Niako_6455	9.403e-87	298.0	28IM1@1|root,2Z8MK@2|Bacteria,4NIZ0@976|Bacteroidetes,1J00C@117747|Sphingobacteriia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_7488398_0	1121904.ARBP01000001_gene5494	1.818e-128	436.0	COG0793@1|root,COG0793@2|Bacteria,4NFK4@976|Bacteroidetes,47KAN@768503|Cytophagia	976|Bacteroidetes	M	Belongs to the peptidase S41A family	-	-	3.4.21.102	ko:K03797	-	-	-	-	ko00000,ko01000,ko01002	-	-	-	DUF3340,PDZ,Peptidase_S41
BYD3_k127_7488398_10	521011.Mpal_1684	2.61e-06	58.0	COG4912@1|root,arCOG05122@2157|Archaea,2XWYV@28890|Euryarchaeota,2N9IE@224756|Methanomicrobia	224756|Methanomicrobia	L	PFAM DNA alkylation repair enzyme	-	-	-	-	-	-	-	-	-	-	-	-	DNA_alkylation
BYD3_k127_7497422_4	452637.Oter_3673	2.179e-236	788.0	COG2982@1|root,COG2982@2|Bacteria,46XH6@74201|Verrucomicrobia,3KA1C@414999|Opitutae	414999|Opitutae	M	Protein involved in outer membrane biogenesis	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_7497422_12	1123073.KB899241_gene3088	5.308e-55	198.0	2DPQD@1|root,332Z4@2|Bacteria,1R3FS@1224|Proteobacteria,1T67D@1236|Gammaproteobacteria,1X7FX@135614|Xanthomonadales	1224|Proteobacteria	S	Gluconate 2-dehydrogenase subunit 3	-	-	-	-	-	-	-	-	-	-	-	-	Gluconate_2-dh3
BYD3_k127_7497422_1	1123073.KB899242_gene1193	1.903e-286	887.0	COG2303@1|root,COG2303@2|Bacteria,1MU3F@1224|Proteobacteria,1RPBQ@1236|Gammaproteobacteria,1X4F1@135614|Xanthomonadales	135614|Xanthomonadales	E	GMC oxidoreductase	-	-	-	-	-	-	-	-	-	-	-	-	GMC_oxred_C,GMC_oxred_N
BYD3_k127_7497422_5	926549.KI421517_gene1462	1.04e-216	689.0	COG0488@1|root,COG0488@2|Bacteria,4NES5@976|Bacteroidetes,47JCA@768503|Cytophagia	976|Bacteroidetes	S	ABC transporter	yfmR	-	-	ko:K15738	-	-	-	-	ko00000,ko02000	3.A.1.120.6	-	-	ABC_tran,ABC_tran_CTD,ABC_tran_Xtn
BYD3_k127_7497422_7	700598.Niako_4478	9.043e-140	453.0	COG3325@1|root,COG3325@2|Bacteria,4NGAZ@976|Bacteroidetes,1IR7C@117747|Sphingobacteriia	976|Bacteroidetes	G	Belongs to the glycosyl hydrolase 18 family	-	-	3.2.1.14	ko:K01183	ko00520,ko01100,map00520,map01100	-	R01206,R02334	RC00467	ko00000,ko00001,ko01000	-	GH18	-	Glyco_hydro_18
BYD3_k127_7497422_0	1237149.C900_05254	0.0	1039.0	COG3127@1|root,COG3127@2|Bacteria,4NF16@976|Bacteroidetes,47MB7@768503|Cytophagia	976|Bacteroidetes	Q	FtsX-like permease family	-	-	-	ko:K02004	-	M00258	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	FtsX,MacB_PCD
BYD3_k127_7497422_9	1237149.C900_03345	1.509e-76	263.0	COG0566@1|root,COG0566@2|Bacteria,4NG1U@976|Bacteroidetes,47NSP@768503|Cytophagia	976|Bacteroidetes	J	PFAM SpoU rRNA Methylase family	aviRb	-	-	ko:K03437	-	-	-	-	ko00000,ko03016	-	-	-	SpoU_methylase,SpoU_sub_bind
BYD3_k127_7497422_2	1237149.C900_03344	9.415e-259	821.0	COG4775@1|root,COG4775@2|Bacteria,4NE80@976|Bacteroidetes,47K6V@768503|Cytophagia	976|Bacteroidetes	M	Outer membrane protein protective antigen OMA87	-	-	-	-	-	-	-	-	-	-	-	-	Bac_surface_Ag,POTRA
BYD3_k127_7497422_8	1237149.C900_03342	1.53e-139	448.0	COG0408@1|root,COG0408@2|Bacteria,4NFZS@976|Bacteroidetes,47M0F@768503|Cytophagia	976|Bacteroidetes	H	PFAM coproporphyrinogen III oxidase	hemF	-	1.3.3.3	ko:K00228	ko00860,ko01100,ko01110,map00860,map01100,map01110	M00121	R03220	RC00884	ko00000,ko00001,ko00002,ko01000	-	-	-	Coprogen_oxidas
BYD3_k127_7497422_11	1237149.C900_05326	7.885e-62	223.0	COG0589@1|root,COG0589@2|Bacteria,4NFZ5@976|Bacteroidetes,47PIA@768503|Cytophagia	976|Bacteroidetes	T	Universal stress protein	-	-	-	-	-	-	-	-	-	-	-	-	Usp
BYD3_k127_7497422_15	1121481.AUAS01000001_gene4420	3.172e-24	102.0	COG1278@1|root,COG1278@2|Bacteria,4NURE@976|Bacteroidetes,47RX4@768503|Cytophagia	976|Bacteroidetes	K	Cold-shock protein	-	-	-	ko:K03704	-	-	-	-	ko00000,ko03000	-	-	-	CSD
BYD3_k127_7497422_10	1123248.KB893330_gene437	2.89e-65	229.0	COG3571@1|root,COG3571@2|Bacteria,4NEGG@976|Bacteroidetes,1IUJ8@117747|Sphingobacteriia	976|Bacteroidetes	S	Alpha/beta hydrolase family	-	-	-	ko:K07020	-	-	-	-	ko00000	-	-	-	Abhydrolase_5
BYD3_k127_7497422_13	1121373.KB903620_gene2064	2.614e-32	130.0	COG1873@1|root,COG1873@2|Bacteria,4PKPS@976|Bacteroidetes,47XYE@768503|Cytophagia	976|Bacteroidetes	S	PRC-barrel domain	-	-	-	-	-	-	-	-	-	-	-	-	PRC
BYD3_k127_7497422_3	1237149.C900_05453	2.376e-246	782.0	COG5009@1|root,COG5009@2|Bacteria,4NECJ@976|Bacteroidetes,47MZQ@768503|Cytophagia	976|Bacteroidetes	M	Transglycosylase	-	-	2.4.1.129,3.4.16.4	ko:K05366	ko00550,ko01100,ko01501,map00550,map01100,map01501	-	-	-	ko00000,ko00001,ko01000,ko01003,ko01011	-	GT51	-	Transgly,Transpeptidase
BYD3_k127_7497422_6	1123248.KB893338_gene2306	2.126e-176	584.0	COG0577@1|root,COG0577@2|Bacteria,4NDUK@976|Bacteroidetes,1IRGG@117747|Sphingobacteriia	976|Bacteroidetes	V	MacB-like periplasmic core domain	-	-	-	-	-	-	-	-	-	-	-	-	FtsX,MacB_PCD
BYD3_k127_7497422_14	504472.Slin_0949	1.646e-31	126.0	COG1695@1|root,COG1695@2|Bacteria,4NQ31@976|Bacteroidetes,47UWR@768503|Cytophagia	976|Bacteroidetes	K	Transcriptional regulator PadR-like family	-	-	-	-	-	-	-	-	-	-	-	-	PadR
BYD3_k127_756660_0	1239962.C943_01002	0.0	1205.0	COG0841@1|root,COG0841@2|Bacteria,4NDZG@976|Bacteroidetes,47JGB@768503|Cytophagia	976|Bacteroidetes	V	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family	-	-	-	ko:K03296	-	-	-	-	ko00000	2.A.6.2	-	-	ACR_tran
BYD3_k127_756660_4	1239962.C943_01001	1.681e-146	475.0	COG0845@1|root,COG0845@2|Bacteria,4NIDC@976|Bacteroidetes,47M9U@768503|Cytophagia	976|Bacteroidetes	M	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family	-	-	-	ko:K03585	ko01501,ko01503,map01501,map01503	M00646,M00647,M00699,M00718	-	-	ko00000,ko00001,ko00002,ko01504,ko02000,ko03036	2.A.6.2,8.A.1.6	-	-	HlyD_D23
BYD3_k127_756660_7	1341181.FLJC2902T_00880	3.901e-66	234.0	2C3WA@1|root,2Z8P1@2|Bacteria,4NW8R@976|Bacteroidetes,1IAW1@117743|Flavobacteriia,2NWKD@237|Flavobacterium	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_756660_14	1506583.JQJY01000004_gene2602	1.438e-10	72.0	2ENC0@1|root,33FZK@2|Bacteria,4NJTX@976|Bacteroidetes,1I8S6@117743|Flavobacteriia,2NVDX@237|Flavobacterium	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_756660_12	1121904.ARBP01000013_gene309	2.955e-33	137.0	COG1226@1|root,32Y28@2|Bacteria	2|Bacteria	P	Ion transport 2 domain protein	RB9536	-	-	-	-	-	-	-	-	-	-	-	Ion_trans_2
BYD3_k127_756660_6	1492737.FEM08_07500	7.936e-118	389.0	COG0628@1|root,COG0628@2|Bacteria,4NN3B@976|Bacteroidetes,1HYEH@117743|Flavobacteriia,2NUR6@237|Flavobacterium	976|Bacteroidetes	S	AI-2E family transporter	-	-	-	-	-	-	-	-	-	-	-	-	AI-2E_transport
BYD3_k127_756660_1	1121904.ARBP01000011_gene1407	5.832e-187	592.0	COG3930@1|root,COG3930@2|Bacteria	2|Bacteria	E	Protein conserved in bacteria	-	-	-	-	-	-	-	-	-	-	-	-	DUF1704
BYD3_k127_756660_9	929556.Solca_2785	2.117e-58	210.0	2C7HJ@1|root,31BFZ@2|Bacteria,4NRGQ@976|Bacteroidetes,1IXYY@117747|Sphingobacteriia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	OMP_b-brl
BYD3_k127_756660_8	530564.Psta_3813	2.605e-63	240.0	COG0668@1|root,COG1196@1|root,COG0668@2|Bacteria,COG1196@2|Bacteria,2J2C2@203682|Planctomycetes	203682|Planctomycetes	M	Mechanosensitive ion channel	-	-	-	ko:K03442,ko:K22044	-	-	-	-	ko00000,ko02000	1.A.23.2,1.A.23.3	-	-	MS_channel
BYD3_k127_756660_11	926549.KI421517_gene310	1.755e-43	164.0	2CIC2@1|root,32S7R@2|Bacteria,4NTW2@976|Bacteroidetes,47Q8B@768503|Cytophagia	976|Bacteroidetes	S	Domain of unknown function (DUF4136)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4136
BYD3_k127_756660_3	1123248.KB893327_gene778	2.533e-151	483.0	COG4977@1|root,COG4977@2|Bacteria,4NIJW@976|Bacteroidetes,1IVHA@117747|Sphingobacteriia	976|Bacteroidetes	K	DJ-1/PfpI family	-	-	-	-	-	-	-	-	-	-	-	-	DJ-1_PfpI,HTH_18
BYD3_k127_756660_10	1123248.KB893327_gene777	4.174e-47	171.0	COG0346@1|root,COG0346@2|Bacteria,4NSDB@976|Bacteroidetes,1IYG1@117747|Sphingobacteriia	976|Bacteroidetes	E	Glyoxalase-like domain	-	-	-	-	-	-	-	-	-	-	-	-	Glyoxalase
BYD3_k127_756660_5	1492737.FEM08_21780	6.044e-118	389.0	COG0859@1|root,COG0859@2|Bacteria,4NFVU@976|Bacteroidetes,1HXFI@117743|Flavobacteriia,2NUK0@237|Flavobacterium	976|Bacteroidetes	M	heptosyltransferase	-	-	-	-	-	-	-	-	-	-	-	-	Glyco_transf_9
BYD3_k127_756660_2	1185876.BN8_01434	1.779e-171	566.0	COG0577@1|root,COG0577@2|Bacteria,4NJII@976|Bacteroidetes,47KJS@768503|Cytophagia	976|Bacteroidetes	V	MacB-like periplasmic core domain	-	-	-	ko:K02004	-	M00258	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	FtsX,MacB_PCD
BYD3_k127_7567593_0	376686.Fjoh_3155	4.999e-162	527.0	COG3501@1|root,COG3501@2|Bacteria,4NFPB@976|Bacteroidetes,1HZN7@117743|Flavobacteriia,2NU7J@237|Flavobacterium	976|Bacteroidetes	S	Rhs element Vgr protein	-	-	-	-	-	-	-	-	-	-	-	-	Phage_GPD
BYD3_k127_7567593_3	159087.Daro_3608	1.263e-40	151.0	COG4104@1|root,COG4104@2|Bacteria,1N0ZK@1224|Proteobacteria,2VYUS@28216|Betaproteobacteria	28216|Betaproteobacteria	S	PAAR repeat-containing protein	-	-	-	-	-	-	-	-	-	-	-	-	PAAR_motif
BYD3_k127_7567593_4	313606.M23134_06088	4.244e-39	149.0	COG3628@1|root,COG3628@2|Bacteria,4NSKN@976|Bacteroidetes,47RET@768503|Cytophagia	976|Bacteroidetes	S	Gene 25-like lysozyme	-	-	-	ko:K06903	-	-	-	-	ko00000	-	-	-	GPW_gp25
BYD3_k127_7567593_1	1237149.C900_01827	8.938e-144	492.0	COG3299@1|root,COG3299@2|Bacteria,4NF69@976|Bacteroidetes,47N9M@768503|Cytophagia	976|Bacteroidetes	S	homolog of phage Mu protein gp47	-	-	-	-	-	-	-	-	-	-	-	-	Baseplate_J
BYD3_k127_7567593_2	489825.LYNGBM3L_48850	1.72e-50	204.0	COG1239@1|root,COG1239@2|Bacteria,1GQHW@1117|Cyanobacteria,1HE6P@1150|Oscillatoriales	1117|Cyanobacteria	H	Involved in chlorophyll biosynthesis. Catalyzes the insertion of magnesium ion into protoporphyrin IX to yield Mg- protoporphyrin IX	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_7567593_5	1120966.AUBU01000013_gene347	2.863e-09	65.0	COG4942@1|root,COG4942@2|Bacteria,4NTB7@976|Bacteroidetes,47R8P@768503|Cytophagia	976|Bacteroidetes	D	peptidase	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_7570390_108	362418.IW19_18055	7.846e-11	64.0	COG2827@1|root,COG2827@2|Bacteria,4NW73@976|Bacteroidetes,1I614@117743|Flavobacteriia,2NXCJ@237|Flavobacterium	976|Bacteroidetes	L	Excinuclease ABC subunit C	-	-	-	ko:K07461	-	-	-	-	ko00000	-	-	-	GIY-YIG
BYD3_k127_7570390_1	1123277.KB893195_gene5691	1.086e-282	889.0	COG0577@1|root,COG0577@2|Bacteria,4NDUK@976|Bacteroidetes,47NE2@768503|Cytophagia	976|Bacteroidetes	V	MacB-like periplasmic core domain	-	-	-	-	-	-	-	-	-	-	-	-	FtsX,MacB_PCD
BYD3_k127_7570390_94	362418.IW19_18055	1.259e-22	102.0	COG2827@1|root,COG2827@2|Bacteria,4NW73@976|Bacteroidetes,1I614@117743|Flavobacteriia,2NXCJ@237|Flavobacterium	976|Bacteroidetes	L	Excinuclease ABC subunit C	-	-	-	ko:K07461	-	-	-	-	ko00000	-	-	-	GIY-YIG
BYD3_k127_7570390_99	468059.AUHA01000002_gene140	2.35e-18	85.0	COG2003@1|root,COG2003@2|Bacteria,4NRCM@976|Bacteroidetes,1ISFA@117747|Sphingobacteriia	976|Bacteroidetes	L	DNA repair	-	-	-	ko:K03630	-	-	-	-	ko00000	-	-	-	RadC
BYD3_k127_7570390_17	1254432.SCE1572_04615	4.832e-161	526.0	COG0003@1|root,COG0003@2|Bacteria,1MUTX@1224|Proteobacteria,42MT4@68525|delta/epsilon subdivisions,2WKZD@28221|Deltaproteobacteria,2Z34N@29|Myxococcales	28221|Deltaproteobacteria	D	AAA domain	-	-	3.6.3.16	ko:K01551	-	-	-	-	ko00000,ko01000,ko02000	3.A.19.1,3.A.21.1,3.A.4.1	-	-	ArsA_ATPase
BYD3_k127_7570390_35	1121930.AQXG01000001_gene1182	4.482e-117	379.0	COG1814@1|root,COG1814@2|Bacteria,4NE6W@976|Bacteroidetes,1IPT0@117747|Sphingobacteriia	976|Bacteroidetes	S	VIT family	-	-	-	-	-	-	-	-	-	-	-	-	VIT1
BYD3_k127_7570390_33	1484460.JSWG01000010_gene3193	3.684e-122	394.0	COG0450@1|root,COG0450@2|Bacteria,4NEZZ@976|Bacteroidetes,1I036@117743|Flavobacteriia	976|Bacteroidetes	O	PFAM C-terminal domain of 1-Cys peroxiredoxin	-	-	1.11.1.15	ko:K03386	ko04214,map04214	-	-	-	ko00000,ko00001,ko01000,ko04147	-	-	-	1-cysPrx_C,AhpC-TSA
BYD3_k127_7570390_34	1123057.P872_20420	4.757e-118	385.0	COG1028@1|root,COG1028@2|Bacteria,4NGQY@976|Bacteroidetes,47JWP@768503|Cytophagia	976|Bacteroidetes	IQ	KR domain	-	-	1.1.1.53	ko:K00038	ko00140,ko01100,map00140,map01100	-	R04831,R04834,R04844,R04847	RC00139,RC01219,RC01220	ko00000,ko00001,ko01000	-	-	-	adh_short_C2
BYD3_k127_7570390_115	1237149.C900_02169	6.219e-05	47.0	COG0589@1|root,COG0589@2|Bacteria,4NFZ5@976|Bacteroidetes,47PIA@768503|Cytophagia	976|Bacteroidetes	T	Universal stress protein	-	-	-	-	-	-	-	-	-	-	-	-	Usp
BYD3_k127_7570390_85	1237149.C900_02170	2.684e-37	144.0	2CBAQ@1|root,30Y66@2|Bacteria,4PBX7@976|Bacteroidetes,47WGF@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_7570390_117	1123248.KB893359_gene2201	0.0003855	43.0	COG0459@1|root,COG0459@2|Bacteria,4NDZM@976|Bacteroidetes,1INP2@117747|Sphingobacteriia	976|Bacteroidetes	O	Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions	groL	GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006457,GO:0006458,GO:0008150,GO:0009987,GO:0016465,GO:0032991,GO:0044183,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0051082,GO:0061077,GO:0101031,GO:1990220	-	ko:K04077	ko03018,ko04212,ko04940,ko05134,ko05152,map03018,map04212,map04940,map05134,map05152	-	-	-	ko00000,ko00001,ko03019,ko03029,ko03110,ko04147	-	-	-	Cpn60_TCP1
BYD3_k127_7570390_107	927658.AJUM01000034_gene231	1.06e-11	68.0	COG0459@1|root,COG0459@2|Bacteria,4NDZM@976|Bacteroidetes,2FMH4@200643|Bacteroidia,3XIIU@558415|Marinilabiliaceae	976|Bacteroidetes	O	TCP-1/cpn60 chaperonin family	groL	GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006457,GO:0006458,GO:0008150,GO:0009987,GO:0016465,GO:0032991,GO:0044183,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0051082,GO:0061077,GO:0101031,GO:1990220	-	ko:K04077	ko03018,ko04212,ko04940,ko05134,ko05152,map03018,map04212,map04940,map05134,map05152	-	-	-	ko00000,ko00001,ko03019,ko03029,ko03110,ko04147	-	-	-	Cpn60_TCP1
BYD3_k127_7570390_100	755732.Fluta_3196	1.548e-17	85.0	2EDGF@1|root,337CN@2|Bacteria,4NXB6@976|Bacteroidetes	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_7570390_104	1237149.C900_05039	4.509e-15	77.0	2C1EG@1|root,2Z7MZ@2|Bacteria,4NYQE@976|Bacteroidetes	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_7570390_109	666686.B1NLA3E_08530	9.534e-11	65.0	2C1EG@1|root,2Z7MZ@2|Bacteria,1V7SD@1239|Firmicutes,4HSP4@91061|Bacilli	91061|Bacilli	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_7570390_116	1247024.JRLH01000001_gene853	0.000158	44.0	2DRC0@1|root,33B61@2|Bacteria,1NHS4@1224|Proteobacteria,1SGUR@1236|Gammaproteobacteria	1236|Gammaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_7570390_91	761193.Runsl_5591	8.089e-24	104.0	COG1359@1|root,COG1359@2|Bacteria,4NSV0@976|Bacteroidetes,47R4E@768503|Cytophagia	976|Bacteroidetes	S	Antibiotic biosynthesis monooxygenase	-	-	-	-	-	-	-	-	-	-	-	-	ABM
BYD3_k127_7570390_53	1237149.C900_02698	1.814e-94	316.0	COG1912@1|root,COG1912@2|Bacteria,4NG9Y@976|Bacteroidetes,47PDG@768503|Cytophagia	976|Bacteroidetes	S	S-adenosyl-l-methionine hydroxide adenosyltransferase	fjo14	-	-	-	-	-	-	-	-	-	-	-	SAM_adeno_trans
BYD3_k127_7570390_23	313606.M23134_07682	4.289e-141	455.0	COG1702@1|root,COG1702@2|Bacteria,4NDYV@976|Bacteroidetes,47JUG@768503|Cytophagia	976|Bacteroidetes	T	Phosphate starvation-inducible protein PhoH	phoH	-	-	ko:K06217	-	-	-	-	ko00000	-	-	-	PhoH
BYD3_k127_7570390_20	1237149.C900_01609	6.499e-152	506.0	COG0658@1|root,COG0658@2|Bacteria,4NEJH@976|Bacteroidetes,47K9X@768503|Cytophagia	976|Bacteroidetes	S	TIGRFAM ComEC Rec2-related protein	comEC	-	-	ko:K02238	-	M00429	-	-	ko00000,ko00002,ko02044	3.A.11.1,3.A.11.2	-	-	Competence,DUF4131
BYD3_k127_7570390_49	1237149.C900_01608	2.981e-99	330.0	COG1024@1|root,COG1024@2|Bacteria,4NI32@976|Bacteroidetes,47MCZ@768503|Cytophagia	976|Bacteroidetes	I	Belongs to the enoyl-CoA hydratase isomerase family	-	-	4.2.1.18	ko:K13766	ko00280,ko01100,map00280,map01100	M00036	R02085	RC02416	ko00000,ko00001,ko00002,ko01000	-	-	-	ECH_1
BYD3_k127_7570390_5	1237149.C900_01606	2.294e-237	749.0	COG0514@1|root,COG0514@2|Bacteria,4NEFD@976|Bacteroidetes,47M73@768503|Cytophagia	976|Bacteroidetes	L	ATP-dependent DNA helicase RecQ	recQ2	-	3.6.4.12	ko:K03654	ko03018,map03018	-	-	-	ko00000,ko00001,ko01000,ko03400	-	-	-	DEAD,Helicase_C,RecQ_Zn_bind
BYD3_k127_7570390_72	153721.MYP_4660	1.553e-53	196.0	COG1434@1|root,COG1434@2|Bacteria,4NNUT@976|Bacteroidetes,47QTX@768503|Cytophagia	976|Bacteroidetes	S	DUF218 domain	-	-	-	-	-	-	-	-	-	-	-	-	DUF218
BYD3_k127_7570390_89	1492737.FEM08_07130	3.318e-30	128.0	COG2067@1|root,COG2067@2|Bacteria,4NXNU@976|Bacteroidetes,1IACV@117743|Flavobacteriia,2NV66@237|Flavobacterium	976|Bacteroidetes	I	Protein of unknown function (DUF2490)	-	-	-	-	-	-	-	-	-	-	-	-	DUF2490
BYD3_k127_7570390_12	1237149.C900_04019	4.175e-174	562.0	COG0497@1|root,COG0497@2|Bacteria,4NE3I@976|Bacteroidetes,47JTP@768503|Cytophagia	976|Bacteroidetes	L	May be involved in recombinational repair of damaged DNA	recN	-	-	ko:K03631	-	-	-	-	ko00000,ko03400	-	-	-	SMC_N
BYD3_k127_7570390_37	1237149.C900_04021	2.717e-114	376.0	28HA8@1|root,2Z7MQ@2|Bacteria,4NEJD@976|Bacteroidetes,47N7V@768503|Cytophagia	976|Bacteroidetes	S	Domain of unknown function (DUF4835)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4835
BYD3_k127_7570390_13	1237149.C900_04022	1.703e-169	541.0	COG0452@1|root,COG0452@2|Bacteria,4NE46@976|Bacteroidetes,47MHR@768503|Cytophagia	976|Bacteroidetes	H	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine	coaBC	-	4.1.1.36,6.3.2.5	ko:K13038	ko00770,ko01100,map00770,map01100	M00120	R03269,R04231	RC00064,RC00090,RC00822	ko00000,ko00001,ko00002,ko01000	-	-	-	DFP,Flavoprotein
BYD3_k127_7570390_84	1237149.C900_04023	9.026e-39	147.0	2CT4B@1|root,32SSJ@2|Bacteria,4NQ76@976|Bacteroidetes,47RC2@768503|Cytophagia	976|Bacteroidetes	K	Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits	rpoZ	-	-	-	-	-	-	-	-	-	-	-	RNA_pol_Rpb6
BYD3_k127_7570390_52	1237149.C900_04024	1.61e-94	318.0	COG4105@1|root,COG4105@2|Bacteria,4NJ5A@976|Bacteroidetes,47MWE@768503|Cytophagia	976|Bacteroidetes	S	TIGRFAM Outer membrane assembly lipoprotein YfiO	yfiO	-	-	ko:K05807	-	-	-	-	ko00000,ko02000	1.B.33.1	-	-	YfiO
BYD3_k127_7570390_66	1237149.C900_04025	5.866e-63	224.0	2AEI8@1|root,331SH@2|Bacteria,4NWWM@976|Bacteroidetes,47S6K@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_7570390_18	1237149.C900_04026	1.857e-159	518.0	COG1452@1|root,COG1452@2|Bacteria,4NDU3@976|Bacteroidetes,47KAE@768503|Cytophagia	976|Bacteroidetes	M	OstA-like protein	-	-	-	-	-	-	-	-	-	-	-	-	OstA,OstA_2
BYD3_k127_7570390_38	1237149.C900_04027	1.049e-113	381.0	COG0037@1|root,COG0037@2|Bacteria,4NEJS@976|Bacteroidetes,47M2U@768503|Cytophagia	976|Bacteroidetes	D	Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine	tilS	-	6.3.4.19	ko:K04075	-	-	R09597	RC02633,RC02634	ko00000,ko01000,ko03016	-	-	-	ATP_bind_3,TilS_C
BYD3_k127_7570390_11	1237149.C900_04029	3.147e-174	549.0	COG0039@1|root,COG0039@2|Bacteria,4NEJ7@976|Bacteroidetes,47MD1@768503|Cytophagia	976|Bacteroidetes	C	Catalyzes the reversible oxidation of malate to oxaloacetate	mdh	-	1.1.1.37	ko:K00024	ko00020,ko00270,ko00620,ko00630,ko00680,ko00710,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00270,map00620,map00630,map00680,map00710,map00720,map01100,map01110,map01120,map01130,map01200	M00009,M00011,M00012,M00168,M00173,M00346,M00374,M00620,M00740	R00342,R07136	RC00031	ko00000,ko00001,ko00002,ko01000	-	-	-	Ldh_1_C,Ldh_1_N
BYD3_k127_7570390_36	643867.Ftrac_3122	3.554e-115	376.0	COG0500@1|root,COG2226@2|Bacteria,4NE6P@976|Bacteroidetes,47K6K@768503|Cytophagia	976|Bacteroidetes	Q	Methyltransferase domain	rebM	-	-	-	-	-	-	-	-	-	-	-	Methyltransf_11
BYD3_k127_7570390_67	313606.M23134_08314	5.969e-61	216.0	COG1595@1|root,COG1595@2|Bacteria,4NU4K@976|Bacteroidetes,47UQA@768503|Cytophagia	976|Bacteroidetes	K	ECF sigma factor	-	-	-	ko:K03088	-	-	-	-	ko00000,ko03021	-	-	-	Sigma70_r2,Sigma70_r4_2
BYD3_k127_7570390_80	643867.Ftrac_1115	5.012e-44	175.0	2FI0F@1|root,3433Q@2|Bacteria,4P46Y@976|Bacteroidetes,47VJN@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_7570390_24	1237149.C900_05604	7.351e-141	460.0	COG0845@1|root,COG0845@2|Bacteria,4NGSC@976|Bacteroidetes,47TMZ@768503|Cytophagia	976|Bacteroidetes	M	HlyD membrane-fusion protein of T1SS	-	-	-	-	-	-	-	-	-	-	-	-	HlyD,HlyD_3,HlyD_D23
BYD3_k127_7570390_9	1237149.C900_05605	3.302e-186	592.0	COG0577@1|root,COG0577@2|Bacteria,4NEBD@976|Bacteroidetes,47JWH@768503|Cytophagia	976|Bacteroidetes	V	MacB-like periplasmic core domain	-	-	-	ko:K02004	-	M00258	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	FtsX,MacB_PCD
BYD3_k127_7570390_15	1237149.C900_05606	3.465e-167	539.0	COG1538@1|root,COG1538@2|Bacteria,4NGXM@976|Bacteroidetes,47KVY@768503|Cytophagia	976|Bacteroidetes	MU	PFAM Outer membrane efflux protein	-	-	-	-	-	-	-	-	-	-	-	-	OEP
BYD3_k127_7570390_16	1131812.JQMS01000001_gene2402	2.202e-162	529.0	COG0038@1|root,COG0517@1|root,COG0038@2|Bacteria,COG0517@2|Bacteria,4NFCF@976|Bacteroidetes,1HWJE@117743|Flavobacteriia,2NSE8@237|Flavobacterium	976|Bacteroidetes	P	Transporter	-	-	-	ko:K03281	-	-	-	-	ko00000	2.A.49	-	-	CBS,Voltage_CLC
BYD3_k127_7570390_97	1121373.KB903621_gene1849	3.988e-20	92.0	2E6ZV@1|root,331IX@2|Bacteria,4NWV5@976|Bacteroidetes,47X7S@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_7570390_110	1300143.CCAV010000001_gene919	3.413e-08	61.0	2EJDT@1|root,33D4U@2|Bacteria	2|Bacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_7570390_55	1121904.ARBP01000012_gene1256	8.427e-91	320.0	COG2202@1|root,COG2203@1|root,COG2202@2|Bacteria,COG2203@2|Bacteria	2|Bacteria	T	Gaf domain	rsbP	-	3.1.3.3	ko:K02660,ko:K07315,ko:K17763	ko02020,ko02025,map02020,map02025	-	-	-	ko00000,ko00001,ko01000,ko02035,ko02044,ko03021	-	-	-	GAF,GAF_2,GGDEF,HATPase_c,HD_5,HisKA,PAS,PAS_3,PAS_4,PAS_8,PAS_9,Response_reg,STAS,SpoIIE
BYD3_k127_7570390_92	864702.OsccyDRAFT_0640	4.257e-23	102.0	2E4B4@1|root,32Z6U@2|Bacteria	2|Bacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_7570390_75	1121904.ARBP01000012_gene1357	2.747e-51	195.0	COG3568@1|root,COG3568@2|Bacteria,4NGUV@976|Bacteroidetes,47P9B@768503|Cytophagia	976|Bacteroidetes	S	Endonuclease/Exonuclease/phosphatase family	-	-	-	-	-	-	-	-	-	-	-	-	Exo_endo_phos
BYD3_k127_7570390_27	929562.Emtol_1230	3.203e-131	424.0	COG0627@1|root,COG0627@2|Bacteria,4NGI8@976|Bacteroidetes,47M5Z@768503|Cytophagia	976|Bacteroidetes	S	Putative esterase	-	-	-	-	-	-	-	-	-	-	-	-	Esterase
BYD3_k127_7570390_76	1124780.ANNU01000005_gene2347	7.533e-51	184.0	COG4119@1|root,COG4119@2|Bacteria,4NRRR@976|Bacteroidetes,47VVR@768503|Cytophagia	976|Bacteroidetes	L	NUDIX domain	-	-	-	-	-	-	-	-	-	-	-	-	NUDIX
BYD3_k127_7570390_39	1550091.JROE01000002_gene1135	5.365e-113	371.0	COG1533@1|root,COG1533@2|Bacteria,4NE62@976|Bacteroidetes	976|Bacteroidetes	L	Radical SAM	-	-	-	-	-	-	-	-	-	-	-	-	Radical_SAM
BYD3_k127_7570390_81	1123248.KB893315_gene3246	6.407e-41	156.0	COG4319@1|root,COG4319@2|Bacteria,4NX69@976|Bacteroidetes	976|Bacteroidetes	S	ketosteroid isomerase	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_7570390_87	1089547.KB913013_gene3762	1.521e-35	152.0	COG1819@1|root,COG1819@2|Bacteria,4NM8M@976|Bacteroidetes,47PKS@768503|Cytophagia	976|Bacteroidetes	CG	glycosyl	-	-	-	-	-	-	-	-	-	-	-	-	UDPGT
BYD3_k127_7570390_50	1237149.C900_02639	1.197e-98	328.0	COG0300@1|root,COG0300@2|Bacteria,4NEMK@976|Bacteroidetes,47Y2N@768503|Cytophagia	976|Bacteroidetes	S	Belongs to the short-chain dehydrogenases reductases (SDR) family	-	-	-	-	-	-	-	-	-	-	-	-	adh_short
BYD3_k127_7570390_95	1121887.AUDK01000002_gene2130	5.273e-21	93.0	COG0346@1|root,COG0346@2|Bacteria,4NN6H@976|Bacteroidetes,1I2IV@117743|Flavobacteriia	976|Bacteroidetes	E	Glyoxalase-like domain	-	-	-	ko:K07032	-	-	-	-	ko00000	-	-	-	Glyoxalase
BYD3_k127_7570390_65	1237149.C900_02640	3.214e-63	221.0	COG0262@1|root,COG0262@2|Bacteria,4NQ2Y@976|Bacteroidetes,47Q9G@768503|Cytophagia	976|Bacteroidetes	H	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis	folA	-	1.5.1.3	ko:K00287	ko00670,ko00790,ko01100,ko01523,map00670,map00790,map01100,map01523	M00126,M00840	R00936,R00937,R00939,R00940,R02235,R02236,R11765	RC00109,RC00110,RC00158	ko00000,ko00001,ko00002,ko01000	-	-	-	2TM,DHFR_1
BYD3_k127_7570390_32	1237149.C900_05676	1.295e-126	411.0	COG0223@1|root,COG0223@2|Bacteria,4NE8U@976|Bacteroidetes,47JDP@768503|Cytophagia	976|Bacteroidetes	J	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus	fmt	GO:0003674,GO:0003824,GO:0004479,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006412,GO:0006413,GO:0006464,GO:0006518,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016741,GO:0016742,GO:0019538,GO:0019988,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0036211,GO:0043043,GO:0043170,GO:0043412,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0046483,GO:0071704,GO:0071951,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576	2.1.2.9	ko:K00604	ko00670,ko00970,map00670,map00970	-	R03940	RC00026,RC00165	ko00000,ko00001,ko01000	-	-	-	Formyl_trans_C,Formyl_trans_N
BYD3_k127_7570390_93	1237149.C900_03949	6.617e-23	104.0	2928S@1|root,2ZPTC@2|Bacteria,4P8WI@976|Bacteroidetes	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_7570390_54	1121904.ARBP01000001_gene5464	2.197e-91	304.0	COG0177@1|root,COG0177@2|Bacteria,4NFF3@976|Bacteroidetes,47JCH@768503|Cytophagia	976|Bacteroidetes	L	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate	nth	-	4.2.99.18	ko:K10773	ko03410,map03410	-	-	-	ko00000,ko00001,ko01000,ko03400	-	-	-	EndIII_4Fe-2S,HhH-GPD
BYD3_k127_7570390_22	926549.KI421517_gene1413	2.352e-141	459.0	COG3876@1|root,COG3876@2|Bacteria,4NEXD@976|Bacteroidetes,47KTI@768503|Cytophagia	976|Bacteroidetes	S	PFAM Uncharacterised conserved protein UCP016719	-	-	-	-	-	-	-	-	-	-	-	-	DUF1343
BYD3_k127_7570390_26	1237149.C900_05673	3.677e-133	436.0	COG4591@1|root,COG4591@2|Bacteria,4NFWZ@976|Bacteroidetes,47KVD@768503|Cytophagia	976|Bacteroidetes	M	ABC-type transport system involved in lipoprotein release permease component	lolE_1	-	-	ko:K09808	ko02010,map02010	M00255	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.125	-	-	FtsX,MacB_PCD
BYD3_k127_7570390_114	1121285.AUFK01000017_gene3163	4.229e-05	53.0	29EN2@1|root,301K0@2|Bacteria,4PJY4@976|Bacteroidetes,1IM0B@117743|Flavobacteriia,3ZTID@59732|Chryseobacterium	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_7570390_45	1408473.JHXO01000001_gene2529	5.635e-104	343.0	COG1216@1|root,COG1216@2|Bacteria,4NEHI@976|Bacteroidetes,2FM3A@200643|Bacteroidia	976|Bacteroidetes	S	Glycosyltransferase, group 2 family protein	dpm1	-	2.4.1.83	ko:K00721	ko00510,ko01100,map00510,map01100	-	R01009	RC00005	ko00000,ko00001,ko01000,ko01003	-	GT2	-	Glycos_transf_2
BYD3_k127_7570390_0	1121904.ARBP01000001_gene5338	5.4e-323	1001.0	COG0480@1|root,COG0480@2|Bacteria,4NE9X@976|Bacteroidetes,47M8E@768503|Cytophagia	976|Bacteroidetes	J	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome	-	-	-	ko:K02355	-	-	-	-	ko00000,ko03012,ko03029	-	-	-	EFG_C,EFG_II,EFG_IV,GTP_EFTU,GTP_EFTU_D2
BYD3_k127_7570390_86	1121373.KB903633_gene756	2.578e-36	149.0	2A8JR@1|root,30XN3@2|Bacteria,4PB4F@976|Bacteroidetes,47V6P@768503|Cytophagia	976|Bacteroidetes	S	Domain of unknown function (DUF4412)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4412
BYD3_k127_7570390_73	1408473.JHXO01000002_gene3915	3.222e-53	190.0	COG0454@1|root,COG0456@2|Bacteria,4NQDY@976|Bacteroidetes	976|Bacteroidetes	K	acetyltransferase	-	-	-	-	-	-	-	-	-	-	-	-	Acetyltransf_1,Acetyltransf_7
BYD3_k127_7570390_3	1237149.C900_00272	5.847e-259	802.0	COG0019@1|root,COG0019@2|Bacteria,4NFHV@976|Bacteroidetes,47JRV@768503|Cytophagia	976|Bacteroidetes	E	PFAM Pyridoxal-dependent decarboxylase, C-terminal sheet domain	speA	-	4.1.1.19	ko:K01585	ko00330,ko01100,map00330,map01100	M00133	R00566	RC00299	ko00000,ko00001,ko00002,ko01000	-	-	-	Orn_Arg_deC_N,Orn_DAP_Arg_deC
BYD3_k127_7570390_29	1237149.C900_00273	1.556e-128	418.0	COG0010@1|root,COG0010@2|Bacteria,4NE26@976|Bacteroidetes,47N30@768503|Cytophagia	976|Bacteroidetes	E	Belongs to the arginase family	rocF	-	3.5.3.1,3.5.3.11	ko:K01476,ko:K01480	ko00220,ko00330,ko01100,ko01110,ko01130,ko01230,ko05146,map00220,map00330,map01100,map01110,map01130,map01230,map05146	M00029,M00133,M00134	R00551,R01157	RC00024,RC00329	ko00000,ko00001,ko00002,ko01000	-	-	-	Arginase
BYD3_k127_7570390_40	1121373.KB903665_gene3029	1.882e-112	394.0	COG3291@1|root,COG3291@2|Bacteria,4NH4F@976|Bacteroidetes,47N36@768503|Cytophagia	976|Bacteroidetes	S	IgGFc binding protein	-	-	-	-	-	-	-	-	-	-	-	-	CHU_C,IgGFc_binding
BYD3_k127_7570390_90	1122605.KB893625_gene2027	4.098e-24	110.0	2EU2T@1|root,33MJR@2|Bacteria,4NZIZ@976|Bacteroidetes	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_7570390_10	1237149.C900_00276	3.374e-180	568.0	COG1899@1|root,COG1899@2|Bacteria,4NEZ0@976|Bacteroidetes,47M06@768503|Cytophagia	976|Bacteroidetes	O	Deoxyhypusine synthase	dys1	-	2.5.1.46	ko:K00809	-	-	-	-	ko00000,ko01000	-	-	-	DS
BYD3_k127_7570390_2	1237149.C900_00279	5.579e-267	833.0	COG0018@1|root,COG0018@2|Bacteria,4NE7Q@976|Bacteroidetes,47K91@768503|Cytophagia	976|Bacteroidetes	J	Arginyl-tRNA synthetase	argS	GO:0003674,GO:0003824,GO:0004812,GO:0004814,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006420,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576	6.1.1.19	ko:K01887	ko00970,map00970	M00359,M00360	R03646	RC00055,RC00523	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029	-	-	-	Arg_tRNA_synt_N,DALR_1,tRNA-synt_1d
BYD3_k127_7570390_60	1124780.ANNU01000024_gene3056	6.431e-67	231.0	COG0386@1|root,COG0386@2|Bacteria,4NM6G@976|Bacteroidetes,47P7U@768503|Cytophagia	976|Bacteroidetes	O	Belongs to the glutathione peroxidase family	gpx1	-	1.11.1.9	ko:K00432	ko00480,ko00590,ko04918,map00480,map00590,map04918	-	R00274,R07034,R07035	RC00011,RC00982	ko00000,ko00001,ko01000	-	-	-	GSHPx
BYD3_k127_7570390_68	1189612.A33Q_3303	6.734e-58	205.0	COG0386@1|root,COG0386@2|Bacteria,4NM6G@976|Bacteroidetes,47P7U@768503|Cytophagia	976|Bacteroidetes	O	Belongs to the glutathione peroxidase family	gpx1	-	1.11.1.9	ko:K00432	ko00480,ko00590,ko04918,map00480,map00590,map04918	-	R00274,R07034,R07035	RC00011,RC00982	ko00000,ko00001,ko01000	-	-	-	GSHPx
BYD3_k127_7570390_88	1185876.BN8_04943	3.157e-32	130.0	COG0782@1|root,COG0782@2|Bacteria,4NQAD@976|Bacteroidetes,47QDF@768503|Cytophagia	976|Bacteroidetes	K	Transcription elongation factor	-	-	-	-	-	-	-	-	-	-	-	-	GreA_GreB
BYD3_k127_7570390_43	1237149.C900_00280	8.757e-110	362.0	COG1575@1|root,COG1575@2|Bacteria,4NGCJ@976|Bacteroidetes,47JDA@768503|Cytophagia	976|Bacteroidetes	H	Belongs to the MenA family. Type 1 subfamily	menA	-	2.5.1.74	ko:K02548	ko00130,ko01100,ko01110,map00130,map01100,map01110	M00116	R05617,R06858,R10757	RC02935,RC02936,RC03264	ko00000,ko00001,ko00002,ko01000,ko01006	-	-	-	UbiA
BYD3_k127_7570390_96	880074.BARVI_03550	8.451e-21	100.0	28N4A@1|root,2ZB9T@2|Bacteria,4NKZG@976|Bacteroidetes,2FP6K@200643|Bacteroidia,22XPK@171551|Porphyromonadaceae	976|Bacteroidetes	S	Domain of unknown function (DUF4136)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4136
BYD3_k127_7570390_102	470145.BACCOP_01496	3.718e-16	87.0	COG3047@1|root,COG3047@2|Bacteria,4NP9X@976|Bacteroidetes,2FMHB@200643|Bacteroidia,4AKNK@815|Bacteroidaceae	976|Bacteroidetes	M	COG NOG27406 non supervised orthologous group	-	-	-	-	-	-	-	-	-	-	-	-	OMP_b-brl
BYD3_k127_7570390_4	1123278.KB893388_gene5713	1.226e-255	796.0	COG0518@1|root,COG0519@1|root,COG0518@2|Bacteria,COG0519@2|Bacteria,4NESX@976|Bacteroidetes,47JG6@768503|Cytophagia	976|Bacteroidetes	F	Catalyzes the synthesis of GMP from XMP	guaA	GO:0003674,GO:0003824,GO:0003921,GO:0003922,GO:0006139,GO:0006163,GO:0006164,GO:0006177,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009163,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0016884,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034404,GO:0034641,GO:0034654,GO:0042278,GO:0042451,GO:0042455,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046037,GO:0046128,GO:0046129,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901068,GO:1901070,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659	6.3.5.2	ko:K01951	ko00230,ko00983,ko01100,map00230,map00983,map01100	M00050	R01230,R01231,R08244	RC00010,RC00204	ko00000,ko00001,ko00002,ko01000,ko01002	-	-	-	GATase,GMP_synt_C,NAD_synthase
BYD3_k127_7570390_25	1237149.C900_04417	2.611e-135	450.0	COG0683@1|root,COG0683@2|Bacteria,4PKN8@976|Bacteroidetes,47NJW@768503|Cytophagia	976|Bacteroidetes	E	PFAM Receptor family ligand binding region	-	-	-	-	-	-	-	-	-	-	-	-	Peripla_BP_6
BYD3_k127_7570390_8	1120965.AUBV01000001_gene3487	9.913e-200	629.0	COG0001@1|root,COG0001@2|Bacteria,4NDXG@976|Bacteroidetes,47KB8@768503|Cytophagia	976|Bacteroidetes	H	PFAM Aminotransferase class-III	hemL	-	5.4.3.8	ko:K01845	ko00860,ko01100,ko01110,ko01120,map00860,map01100,map01110,map01120	M00121	R02272	RC00677	ko00000,ko00001,ko00002,ko01000,ko01007	-	-	-	Aminotran_3
BYD3_k127_7570390_56	1121904.ARBP01000012_gene1256	6.155e-90	326.0	COG2202@1|root,COG2203@1|root,COG2202@2|Bacteria,COG2203@2|Bacteria	2|Bacteria	T	Gaf domain	rsbP	-	3.1.3.3	ko:K02660,ko:K07315,ko:K17763	ko02020,ko02025,map02020,map02025	-	-	-	ko00000,ko00001,ko01000,ko02035,ko02044,ko03021	-	-	-	GAF,GAF_2,GGDEF,HATPase_c,HD_5,HisKA,PAS,PAS_3,PAS_4,PAS_8,PAS_9,Response_reg,STAS,SpoIIE
BYD3_k127_7570390_70	755732.Fluta_2148	1.602e-56	203.0	COG0503@1|root,COG0503@2|Bacteria,4NP7K@976|Bacteroidetes,1I29Z@117743|Flavobacteriia,2PBP0@246874|Cryomorphaceae	976|Bacteroidetes	F	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis	apt	-	2.4.2.7	ko:K00759	ko00230,ko01100,map00230,map01100	-	R00190,R01229,R04378	RC00063	ko00000,ko00001,ko01000,ko04147	-	-	-	Pribosyltran
BYD3_k127_7570390_74	1237149.C900_04409	1.358e-51	189.0	COG2802@1|root,COG2802@2|Bacteria,4NEJU@976|Bacteroidetes	976|Bacteroidetes	S	Peptidase S16, lon domain protein	-	-	3.4.21.53	ko:K01338,ko:K07157	ko04112,map04112	-	-	-	ko00000,ko00001,ko01000,ko01002	-	-	-	LON_substr_bdg
BYD3_k127_7570390_105	1237149.C900_02065	1.175e-14	81.0	2EJ5R@1|root,33CWY@2|Bacteria,4NYJK@976|Bacteroidetes,47SY4@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_7570390_31	929703.KE386491_gene2208	6.647e-127	412.0	COG3386@1|root,COG3386@2|Bacteria,4NF4A@976|Bacteroidetes,47NKG@768503|Cytophagia	976|Bacteroidetes	G	SMP-30 Gluconolaconase LRE domain protein	-	-	3.1.1.17	ko:K01053	ko00030,ko00053,ko00930,ko01100,ko01110,ko01120,ko01130,ko01200,ko01220,map00030,map00053,map00930,map01100,map01110,map01120,map01130,map01200,map01220	M00129	R01519,R02933,R03751	RC00537,RC00983	ko00000,ko00001,ko00002,ko01000,ko04147	-	-	-	SGL
BYD3_k127_7570390_63	655815.ZPR_2553	8.018e-65	228.0	COG1208@1|root,COG1208@2|Bacteria,4PNQP@976|Bacteroidetes,1IKAH@117743|Flavobacteriia	976|Bacteroidetes	JM	Hexapeptide repeat of succinyl-transferase	-	-	-	-	-	-	-	-	-	-	-	-	Hexapep
BYD3_k127_7570390_71	1123277.KB893175_gene1388	2.418e-56	198.0	COG0346@1|root,COG0346@2|Bacteria,4NQ7X@976|Bacteroidetes,47QHB@768503|Cytophagia	976|Bacteroidetes	E	PFAM Glyoxalase bleomycin resistance protein dioxygenase	gloA	-	-	ko:K08234	-	-	-	-	ko00000	-	-	-	Glyoxalase
BYD3_k127_7570390_78	1237149.C900_03767	2.203e-48	177.0	COG2839@1|root,COG2839@2|Bacteria,4NNIY@976|Bacteroidetes,47R24@768503|Cytophagia	976|Bacteroidetes	S	Protein of unknown function (DUF456)	-	-	-	ko:K09793	-	-	-	-	ko00000	-	-	-	DUF456
BYD3_k127_7570390_59	1519464.HY22_09275	2.322e-67	237.0	COG1028@1|root,COG1028@2|Bacteria	1519464.HY22_09275|-	IQ	oxidoreductase activity, acting on CH-OH group of donors	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_7570390_79	1185876.BN8_02789	4.713e-47	179.0	29EN4@1|root,301K2@2|Bacteria,4NRU9@976|Bacteroidetes,47TPC@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_7570390_28	1185876.BN8_02790	4.864e-129	421.0	COG2146@1|root,COG2717@1|root,COG2146@2|Bacteria,COG2717@2|Bacteria,4NJUW@976|Bacteroidetes,47TAG@768503|Cytophagia	976|Bacteroidetes	P	Ferric reductase like transmembrane component	-	-	-	-	-	-	-	-	-	-	-	-	Ferric_reduct,Rieske
BYD3_k127_7570390_113	1443665.JACA01000041_gene1506	9.244e-07	56.0	2ERPJ@1|root,33J8X@2|Bacteria,4NY9R@976|Bacteroidetes,1IBVX@117743|Flavobacteriia,2YKRX@290174|Aquimarina	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_7570390_112	111781.Lepto7376_2306	3.626e-07	54.0	2E14K@1|root,32WJQ@2|Bacteria,1G825@1117|Cyanobacteria,1HGGM@1150|Oscillatoriales	1117|Cyanobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_7570390_98	1237149.C900_01600	9.686e-19	93.0	2E5E8@1|root,33066@2|Bacteria,4NWR2@976|Bacteroidetes,47S8F@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_7570390_7	1237149.C900_01599	4.666e-219	742.0	COG3291@1|root,COG3291@2|Bacteria,4NDZQ@976|Bacteroidetes,47MGN@768503|Cytophagia	976|Bacteroidetes	M	C-terminal domain of CHU protein family	-	-	-	-	-	-	-	-	-	-	-	-	CHU_C,PKD
BYD3_k127_7570390_21	1237149.C900_01598	1.209e-141	457.0	COG4772@1|root,COG4772@2|Bacteria,4NG13@976|Bacteroidetes,47MUX@768503|Cytophagia	976|Bacteroidetes	P	TIGRFAM Bacteroidetes-specific	-	-	-	-	-	-	-	-	-	-	-	-	PorP_SprF
BYD3_k127_7570390_61	1185876.BN8_04246	2.701e-66	229.0	COG1047@1|root,COG1047@2|Bacteria,4NM29@976|Bacteroidetes,47QER@768503|Cytophagia	976|Bacteroidetes	O	Peptidyl-prolyl cis-trans isomerase	slyD	-	5.2.1.8	ko:K03775	-	-	-	-	ko00000,ko01000,ko03110	-	-	-	FKBP_C
BYD3_k127_7570390_48	1048983.EL17_14460	3.872e-100	336.0	COG5571@1|root,COG5571@2|Bacteria,4NMBF@976|Bacteroidetes,47RWM@768503|Cytophagia	976|Bacteroidetes	N	Domain of unknown function (DUF4421)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4421
BYD3_k127_7570390_46	1121373.KB903665_gene3134	8.571e-103	342.0	COG1230@1|root,COG1230@2|Bacteria,4NIHB@976|Bacteroidetes,47NNT@768503|Cytophagia	976|Bacteroidetes	P	Cation efflux family	czcD	-	-	ko:K16264	-	-	-	-	ko00000,ko02000	2.A.4.1	-	-	Cation_efflux
BYD3_k127_7570390_62	1121373.KB903643_gene3537	3.39e-65	232.0	COG0454@1|root,COG0456@2|Bacteria,4PNZ0@976|Bacteroidetes	976|Bacteroidetes	K	Acetyltransferase (GNAT) domain	-	-	-	-	-	-	-	-	-	-	-	-	Acetyltransf_1
BYD3_k127_7570390_51	1237149.C900_00284	3.831e-97	325.0	COG0589@1|root,COG0589@2|Bacteria,4NFZ5@976|Bacteroidetes,47PIA@768503|Cytophagia	976|Bacteroidetes	T	Universal stress protein	-	-	-	-	-	-	-	-	-	-	-	-	Usp
BYD3_k127_7570390_101	6326.BUX.s01254.134	1.738e-17	92.0	COG0484@1|root,KOG0714@2759|Eukaryota,38BTN@33154|Opisthokonta,3BCDV@33208|Metazoa,3CTA3@33213|Bilateria,40BAU@6231|Nematoda,1KUT9@119089|Chromadorea	33208|Metazoa	O	DnaJ C terminal domain	DNAJB5	GO:0000122,GO:0001671,GO:0002682,GO:0002684,GO:0003674,GO:0003712,GO:0003714,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005829,GO:0005886,GO:0006355,GO:0006357,GO:0006457,GO:0006458,GO:0006950,GO:0006986,GO:0008047,GO:0008134,GO:0008150,GO:0008593,GO:0009266,GO:0009408,GO:0009628,GO:0009889,GO:0009890,GO:0009892,GO:0009966,GO:0009968,GO:0009987,GO:0010033,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0010646,GO:0010648,GO:0014069,GO:0016020,GO:0019219,GO:0019222,GO:0019899,GO:0023051,GO:0023057,GO:0030234,GO:0030425,GO:0030544,GO:0031072,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031647,GO:0031974,GO:0031981,GO:0032279,GO:0032781,GO:0033554,GO:0035966,GO:0036477,GO:0042221,GO:0042689,GO:0042691,GO:0042995,GO:0043005,GO:0043025,GO:0043085,GO:0043197,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043462,GO:0043618,GO:0043620,GO:0044087,GO:0044093,GO:0044297,GO:0044309,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044445,GO:0044446,GO:0044456,GO:0044463,GO:0044464,GO:0045202,GO:0045595,GO:0045597,GO:0045610,GO:0045612,GO:0045746,GO:0045892,GO:0045934,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048585,GO:0050789,GO:0050790,GO:0050793,GO:0050794,GO:0050821,GO:0050896,GO:0051082,GO:0051084,GO:0051085,GO:0051087,GO:0051094,GO:0051117,GO:0051128,GO:0051129,GO:0051171,GO:0051172,GO:0051239,GO:0051252,GO:0051253,GO:0051336,GO:0051345,GO:0051716,GO:0060255,GO:0060589,GO:0060590,GO:0061077,GO:0061827,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0071944,GO:0080090,GO:0080134,GO:0080135,GO:0090083,GO:0090084,GO:0097201,GO:0097223,GO:0097447,GO:0097458,GO:0098772,GO:0098794,GO:0098984,GO:0099522,GO:0099524,GO:0099572,GO:0120025,GO:0120038,GO:0140110,GO:1900034,GO:1902679,GO:1903506,GO:1903507,GO:2000112,GO:2000113,GO:2001141	-	ko:K09507,ko:K09510,ko:K09511	ko04141,ko05164,map04141,map05164	-	-	-	ko00000,ko00001,ko03110	-	-	-	DnaJ,DnaJ_C
BYD3_k127_7570390_77	1120966.AUBU01000003_gene1558	7.587e-51	182.0	COG0023@1|root,COG0023@2|Bacteria,4NS6M@976|Bacteroidetes,47R38@768503|Cytophagia	976|Bacteroidetes	J	PFAM translation initiation factor SUI1	-	-	-	ko:K03113	ko03013,map03013	-	-	-	ko00000,ko00001,ko03012	-	-	-	SUI1
BYD3_k127_7570390_57	1237149.C900_00768	4.281e-78	268.0	COG3279@1|root,COG3279@2|Bacteria,4NNUY@976|Bacteroidetes	976|Bacteroidetes	K	COGs COG3279 Response regulator of the LytR AlgR family	-	-	-	-	-	-	-	-	-	-	-	-	LytTR,Response_reg
BYD3_k127_7570390_44	1237149.C900_00769	1.384e-104	351.0	COG2972@1|root,COG2972@2|Bacteria,4NMUF@976|Bacteroidetes	976|Bacteroidetes	T	Histidine kinase	-	-	-	-	-	-	-	-	-	-	-	-	His_kinase
BYD3_k127_7570390_83	880070.Cycma_0052	2.782e-39	152.0	29E7I@1|root,3015I@2|Bacteria,4NNFG@976|Bacteroidetes,47T83@768503|Cytophagia	976|Bacteroidetes	S	Protein of unknown function (DUF1761)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1761
BYD3_k127_7570390_118	479435.Kfla_2259	0.0005251	48.0	COG3832@1|root,COG3832@2|Bacteria,2ISCU@201174|Actinobacteria,4DVPU@85009|Propionibacteriales	201174|Actinobacteria	S	Activator of Hsp90 ATPase homolog 1-like protein	-	-	-	-	-	-	-	-	-	-	-	-	AHSA1
BYD3_k127_7570390_64	1237149.C900_03977	2.345e-63	221.0	COG0838@1|root,COG0838@2|Bacteria,4NQET@976|Bacteroidetes,47PRF@768503|Cytophagia	976|Bacteroidetes	C	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient	nuoA	-	1.6.5.3	ko:K00330	ko00190,ko01100,map00190,map01100	M00144	R11945	RC00061	ko00000,ko00001,ko00002,ko01000	3.D.1	-	-	Oxidored_q4
BYD3_k127_7570390_47	1237149.C900_03978	1.798e-101	332.0	COG0377@1|root,COG0377@2|Bacteria,4NHZ2@976|Bacteroidetes,47J9U@768503|Cytophagia	976|Bacteroidetes	C	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient	nuoB	-	1.6.5.3	ko:K00331	ko00190,ko01100,map00190,map01100	M00144	R11945	RC00061	ko00000,ko00001,ko00002,ko01000	3.D.1	-	-	Oxidored_q6
BYD3_k127_7570390_69	1237149.C900_03981	8.026e-57	202.0	COG0852@1|root,COG0852@2|Bacteria,4NPGA@976|Bacteroidetes,47PNZ@768503|Cytophagia	976|Bacteroidetes	C	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient	nuoC	-	1.6.5.3	ko:K00332	ko00190,ko01100,map00190,map01100	M00144	R11945	RC00061	ko00000,ko00001,ko00002,ko01000	3.D.1	-	-	Complex1_30kDa
BYD3_k127_7570390_6	1237149.C900_03982	2.518e-222	693.0	COG0649@1|root,COG0649@2|Bacteria,4NF02@976|Bacteroidetes,47JZW@768503|Cytophagia	976|Bacteroidetes	C	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient	nuoD	-	1.6.5.3	ko:K00333	ko00190,ko01100,map00190,map01100	M00144	R11945	RC00061	ko00000,ko00001,ko00002,ko01000	3.D.1	-	-	Complex1_49kDa
BYD3_k127_7570390_19	1237149.C900_03983	4.159e-154	501.0	COG0062@1|root,COG0063@1|root,COG0062@2|Bacteria,COG0063@2|Bacteria,4NG2F@976|Bacteroidetes,47JYX@768503|Cytophagia	976|Bacteroidetes	G	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration	nnrD	-	4.2.1.136,5.1.99.6	ko:K17758,ko:K17759	-	-	-	-	ko00000,ko01000	-	-	-	Carb_kinase,YjeF_N
BYD3_k127_7570390_30	635013.TherJR_2416	7.031e-128	417.0	COG2008@1|root,COG2008@2|Bacteria,1TPZI@1239|Firmicutes,248TR@186801|Clostridia,2621Y@186807|Peptococcaceae	186801|Clostridia	E	PFAM Beta-eliminating lyase	ltaE	-	4.1.2.48	ko:K01620	ko00260,ko01100,ko01110,ko01120,ko01130,ko01230,map00260,map01100,map01110,map01120,map01130,map01230	-	R00751,R06171	RC00312,RC00372	ko00000,ko00001,ko01000	-	-	-	Beta_elim_lyase
BYD3_k127_7570390_82	616991.JPOO01000001_gene4570	5.488e-40	159.0	COG0589@1|root,COG0589@2|Bacteria,4NHBB@976|Bacteroidetes,1HYAY@117743|Flavobacteriia	976|Bacteroidetes	T	Universal stress protein	uspA	-	-	-	-	-	-	-	-	-	-	-	DUF2007,Usp
BYD3_k127_7570390_14	153721.MYP_329	1.338e-168	540.0	COG1449@1|root,COG1449@2|Bacteria,4NFXW@976|Bacteroidetes,47P2J@768503|Cytophagia	976|Bacteroidetes	G	Belongs to the glycosyl hydrolase 57 family	amyA	-	3.2.1.1	ko:K07405	ko00500,ko01100,map00500,map01100	-	R02108,R02112,R11262	-	ko00000,ko00001,ko01000	-	GH57	-	Glyco_hydro_57
BYD3_k127_7570390_42	1396141.BATP01000007_gene5716	1.203e-110	374.0	COG0297@1|root,COG0297@2|Bacteria,46Z3D@74201|Verrucomicrobia,2IUHH@203494|Verrucomicrobiae	203494|Verrucomicrobiae	G	Glycosyl transferase 4-like domain	-	-	-	-	-	-	-	-	-	-	-	-	Glyco_transf_4,Glycos_transf_1
BYD3_k127_7570390_58	205922.Pfl01_5365	4.02e-72	248.0	COG4341@1|root,COG4341@2|Bacteria,1N0MY@1224|Proteobacteria,1SQW2@1236|Gammaproteobacteria,1YPYX@136843|Pseudomonas fluorescens group	1236|Gammaproteobacteria	S	Metal dependent phosphohydrolases with conserved 'HD' motif.	-	-	1.13.11.78	ko:K21196	ko00440,map00440	-	R10722	RC03261	ko00000,ko00001,ko01000	-	-	-	HD
BYD3_k127_7570390_111	313612.L8106_07249	2.101e-07	55.0	COG0546@1|root,COG0546@2|Bacteria,1G3MX@1117|Cyanobacteria,1HAF8@1150|Oscillatoriales	1117|Cyanobacteria	S	HAD-hyrolase-like	-	-	-	-	-	-	-	-	-	-	-	-	HAD_2
BYD3_k127_7581762_3	1265505.ATUG01000001_gene3278	2.331e-27	117.0	COG0388@1|root,COG0388@2|Bacteria,1MUUB@1224|Proteobacteria,42QTI@68525|delta/epsilon subdivisions,2WMRH@28221|Deltaproteobacteria,2MJMC@213118|Desulfobacterales	28221|Deltaproteobacteria	S	PFAM Nitrilase cyanide hydratase and apolipoprotein N-acyltransferase	-	-	3.5.1.3	ko:K13566	ko00250,map00250	-	R00269,R00348	RC00010	ko00000,ko00001,ko01000	-	-	-	CN_hydrolase
BYD3_k127_7581762_2	1121859.KB890739_gene2477	3.09e-73	260.0	COG0682@1|root,COG0682@2|Bacteria,4NFP7@976|Bacteroidetes,47KQC@768503|Cytophagia	976|Bacteroidetes	M	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins	lgt	-	-	-	-	-	-	-	-	-	-	-	LGT
BYD3_k127_7581762_0	143224.JQMD01000002_gene2503	0.0	1205.0	COG4888@1|root,COG4888@2|Bacteria,4NEE8@976|Bacteroidetes,1HX4C@117743|Flavobacteriia	976|Bacteroidetes	S	PFAM ASPIC and UnbV	-	-	-	-	-	-	-	-	-	-	-	-	UnbV_ASPIC,VCBS
BYD3_k127_7581762_1	1150600.ADIARSV_4003	1.774e-85	294.0	COG1215@1|root,COG1215@2|Bacteria	2|Bacteria	M	transferase activity, transferring glycosyl groups	-	-	-	-	-	-	-	-	-	-	-	-	Glyco_tranf_2_5,Glycos_transf_2
BYD3_k127_7581762_4	743722.Sph21_5079	4.183e-22	97.0	2EUGE@1|root,33MYP@2|Bacteria,4NZG4@976|Bacteroidetes,1IYPX@117747|Sphingobacteriia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_767712_0	926549.KI421517_gene1092	3.716e-168	543.0	COG3420@1|root,COG3420@2|Bacteria,4P1XP@976|Bacteroidetes,47UIA@768503|Cytophagia	976|Bacteroidetes	P	Parallel beta-helix repeats	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_767712_4	1121373.KB903664_gene2680	1.305e-52	207.0	COG2885@1|root,COG3386@1|root,COG2885@2|Bacteria,COG3386@2|Bacteria,4PM26@976|Bacteroidetes,47Y04@768503|Cytophagia	976|Bacteroidetes	GM	C-terminal domain of CHU protein family	-	-	-	-	-	-	-	-	-	-	-	-	CHU_C
BYD3_k127_767712_6	927658.AJUM01000037_gene2206	7.033e-11	68.0	2EQES@1|root,33I0R@2|Bacteria,4NY5D@976|Bacteroidetes	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_767712_5	1267535.KB906767_gene1284	1.125e-43	164.0	COG2128@1|root,COG2128@2|Bacteria,3Y4TK@57723|Acidobacteria,2JJJ6@204432|Acidobacteriia	204432|Acidobacteriia	S	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity	-	-	-	-	-	-	-	-	-	-	-	-	CMD
BYD3_k127_767712_3	1237149.C900_05625	2.397e-55	204.0	COG1595@1|root,COG1595@2|Bacteria,4NMK4@976|Bacteroidetes,47QMY@768503|Cytophagia	976|Bacteroidetes	K	Sigma-70, region 4	-	-	-	ko:K03088	-	-	-	-	ko00000,ko03021	-	-	-	Sigma70_r2,Sigma70_r4_2
BYD3_k127_767712_1	1123248.KB893317_gene4339	2.402e-93	316.0	COG1793@1|root,COG3285@1|root,COG1793@2|Bacteria,COG3285@2|Bacteria,4NESR@976|Bacteroidetes,1IQI9@117747|Sphingobacteriia	976|Bacteroidetes	L	DNA ligase	-	-	6.5.1.1	ko:K01971	ko03450,map03450	-	R00381	RC00005	ko00000,ko00001,ko01000,ko03400	-	-	-	DNA_ligase_A_C,DNA_ligase_A_M,LigD_N
BYD3_k127_767712_2	1123248.KB893338_gene2316	1.297e-68	235.0	COG0129@1|root,COG0129@2|Bacteria,4NEKY@976|Bacteroidetes,1IQEN@117747|Sphingobacteriia	976|Bacteroidetes	EG	Belongs to the IlvD Edd family	-	-	-	-	-	-	-	-	-	-	-	-	ILVD_EDD
BYD3_k127_7716308_0	1168034.FH5T_18185	1.352e-118	393.0	COG0582@1|root,COG0582@2|Bacteria,4NDZJ@976|Bacteroidetes,2FM4Q@200643|Bacteroidia	976|Bacteroidetes	L	Belongs to the 'phage' integrase family	-	-	-	-	-	-	-	-	-	-	-	-	Arm-DNA-bind_5,Phage_int_SAM_5,Phage_integrase
BYD3_k127_7716308_1	929703.KE386491_gene2609	7.711e-62	233.0	COG0739@1|root,COG3209@1|root,COG0739@2|Bacteria,COG3209@2|Bacteria,4NE5D@976|Bacteroidetes,47KAA@768503|Cytophagia	976|Bacteroidetes	M	TIGRFAM RHS repeat-associated core domain	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_7731410_46	1123277.KB893172_gene697	3.235e-95	316.0	COG3828@1|root,COG3828@2|Bacteria,4NI7K@976|Bacteroidetes,47N09@768503|Cytophagia	976|Bacteroidetes	S	Trehalose utilisation	-	-	-	-	-	-	-	-	-	-	-	-	ThuA
BYD3_k127_7731410_4	1123277.KB893174_gene5903	4.034e-312	978.0	COG0577@1|root,COG0577@2|Bacteria,4NDW7@976|Bacteroidetes,47N35@768503|Cytophagia	976|Bacteroidetes	V	FtsX-like permease family	-	-	-	-	-	-	-	-	-	-	-	-	FtsX,MacB_PCD
BYD3_k127_7731410_15	504472.Slin_3764	5.343e-190	623.0	COG0577@1|root,COG0577@2|Bacteria,4NDW7@976|Bacteroidetes,47N35@768503|Cytophagia	976|Bacteroidetes	V	FtsX-like permease family	-	-	-	-	-	-	-	-	-	-	-	-	FtsX,MacB_PCD
BYD3_k127_7731410_65	1123277.KB893174_gene5902	4.195e-46	168.0	COG1695@1|root,COG1695@2|Bacteria,4P3EW@976|Bacteroidetes,47V29@768503|Cytophagia	976|Bacteroidetes	K	PFAM transcriptional regulator PadR family protein	-	-	-	-	-	-	-	-	-	-	-	-	PadR
BYD3_k127_7731410_30	1124780.ANNU01000086_gene1364	5.535e-136	468.0	COG1629@1|root,COG1629@2|Bacteria,COG4771@2|Bacteria,4NGYQ@976|Bacteroidetes	976|Bacteroidetes	P	transport	-	-	-	-	-	-	-	-	-	-	-	-	CarbopepD_reg_2
BYD3_k127_7731410_3	1124780.ANNU01000086_gene1363	0.0	1305.0	COG2373@1|root,COG4206@1|root,COG2373@2|Bacteria,COG4206@2|Bacteria,4NG2S@976|Bacteroidetes,47K94@768503|Cytophagia	976|Bacteroidetes	P	TonB-dependent Receptor Plug Domain	-	-	-	-	-	-	-	-	-	-	-	-	A2M,A2M_N,A2M_comp,A2M_recep,CarbopepD_reg_2,Plug,Thiol-ester_cl
BYD3_k127_7731410_41	1123248.KB893370_gene5061	1.781e-106	355.0	COG3842@1|root,COG3842@2|Bacteria,4NEZ6@976|Bacteroidetes,1IQV7@117747|Sphingobacteriia	976|Bacteroidetes	E	ABC transporter	fbpC2	-	3.6.3.30	ko:K02010	ko02010,map02010	M00190	-	-	ko00000,ko00001,ko00002,ko01000,ko02000	3.A.1.10	-	-	ABC_tran,TOBE_2
BYD3_k127_7731410_63	926549.KI421517_gene1809	9.014e-51	190.0	2F4JI@1|root,33X98@2|Bacteria,4P3P2@976|Bacteroidetes,47V14@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_7731410_51	1506583.JQJY01000006_gene4492	1.031e-69	242.0	COG0702@1|root,COG0702@2|Bacteria,4NR4S@976|Bacteroidetes,1IJ1C@117743|Flavobacteriia,2NVJ5@237|Flavobacterium	976|Bacteroidetes	GM	NmrA-like family	-	-	-	-	-	-	-	-	-	-	-	-	NAD_binding_10
BYD3_k127_7731410_47	1538644.KO02_16545	7.496e-90	304.0	COG0682@1|root,COG0682@2|Bacteria,4NFP7@976|Bacteroidetes,1IQYZ@117747|Sphingobacteriia	976|Bacteroidetes	M	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins	lgt	-	-	-	-	-	-	-	-	-	-	-	LGT
BYD3_k127_7731410_57	946077.W5A_10704	1.722e-58	208.0	COG0454@1|root,COG0456@2|Bacteria,4PMDG@976|Bacteroidetes,1IK8P@117743|Flavobacteriia	976|Bacteroidetes	K	Acetyltransferase (GNAT) family	-	-	-	-	-	-	-	-	-	-	-	-	Acetyltransf_1
BYD3_k127_7731410_71	867900.Celly_0980	1.741e-42	167.0	2FC9Z@1|root,344DN@2|Bacteria,4P6B2@976|Bacteroidetes,1IA5Q@117743|Flavobacteriia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_7731410_31	880070.Cycma_4734	2.436e-134	437.0	COG0673@1|root,COG0673@2|Bacteria,4NFY3@976|Bacteroidetes,47MIQ@768503|Cytophagia	976|Bacteroidetes	S	Oxidoreductase family, C-terminal alpha/beta domain	-	-	-	-	-	-	-	-	-	-	-	-	GFO_IDH_MocA,GFO_IDH_MocA_C
BYD3_k127_7731410_33	1123234.AUKI01000019_gene508	2.119e-124	412.0	COG2133@1|root,COG2133@2|Bacteria,4NF0B@976|Bacteroidetes,1HX9D@117743|Flavobacteriia	976|Bacteroidetes	G	Glucose / Sorbosone dehydrogenase	-	-	-	-	-	-	-	-	-	-	-	-	CBM_6,GSDH,PKD
BYD3_k127_7731410_42	1121875.KB907547_gene3399	1.277e-105	351.0	COG1082@1|root,COG1082@2|Bacteria,4NM4N@976|Bacteroidetes	976|Bacteroidetes	G	Xylose isomerase-like TIM barrel	-	-	-	-	-	-	-	-	-	-	-	-	AP_endonuc_2
BYD3_k127_7731410_55	1122931.AUAE01000018_gene3923	9.442e-64	227.0	COG1082@1|root,COG2133@1|root,COG1082@2|Bacteria,COG2133@2|Bacteria,4NFKF@976|Bacteroidetes,2FRR2@200643|Bacteroidia,22XIX@171551|Porphyromonadaceae	976|Bacteroidetes	G	Domain of Unknown Function (DUF1080)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1080
BYD3_k127_7731410_77	869213.JCM21142_93619	4.575e-35	140.0	2AFQQ@1|root,315SK@2|Bacteria,4NJD4@976|Bacteroidetes,47PFM@768503|Cytophagia	976|Bacteroidetes	S	NUMOD4 motif	-	-	-	-	-	-	-	-	-	-	-	-	HNH_3,NUMOD4
BYD3_k127_7731410_61	504472.Slin_1821	8.459e-52	191.0	COG5113@1|root,COG3236@2|Bacteria,4NP2J@976|Bacteroidetes,47PSH@768503|Cytophagia	976|Bacteroidetes	O	Domain of unknown function (DUF1768)	-	-	-	ko:K09935	-	-	-	-	ko00000	-	-	-	DUF1768
BYD3_k127_7731410_76	1123248.KB893370_gene5118	7.274e-37	141.0	COG3801@1|root,COG3801@2|Bacteria,4NSK5@976|Bacteroidetes,1ITWG@117747|Sphingobacteriia	976|Bacteroidetes	S	YjbR	-	-	-	-	-	-	-	-	-	-	-	-	YjbR
BYD3_k127_7731410_25	1121373.KB903666_gene1302	5.226e-146	476.0	COG0477@1|root,COG2814@2|Bacteria,4NG6X@976|Bacteroidetes,47KCB@768503|Cytophagia	976|Bacteroidetes	EGP	TIGRFAM Drug resistance transporter Bcr CflA subfamily	bcr	-	-	ko:K03446,ko:K07552	-	M00701	-	-	ko00000,ko00002,ko02000	2.A.1.2,2.A.1.3	-	-	MFS_1
BYD3_k127_7731410_1	761193.Runsl_0897	0.0	1506.0	COG0841@1|root,COG0841@2|Bacteria,4NDZG@976|Bacteroidetes,47JGB@768503|Cytophagia	976|Bacteroidetes	V	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family	-	-	-	ko:K03296	-	-	-	-	ko00000	2.A.6.2	-	-	ACR_tran
BYD3_k127_7731410_35	471854.Dfer_0041	6.546e-122	401.0	COG0845@1|root,COG0845@2|Bacteria,4NIDC@976|Bacteroidetes,47M9U@768503|Cytophagia	976|Bacteroidetes	M	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family	-	-	-	ko:K03585	ko01501,ko01503,map01501,map01503	M00646,M00647,M00699,M00718	-	-	ko00000,ko00001,ko00002,ko01504,ko02000,ko03036	2.A.6.2,8.A.1.6	-	-	HlyD_D23
BYD3_k127_7731410_29	471854.Dfer_0042	4.125e-142	463.0	COG1538@1|root,COG1538@2|Bacteria,4NF4X@976|Bacteroidetes,47JA0@768503|Cytophagia	976|Bacteroidetes	MU	Outer membrane efflux protein	-	-	-	-	-	-	-	-	-	-	-	-	OEP
BYD3_k127_7731410_68	929703.KE386492_gene4388	7.35e-44	167.0	COG1309@1|root,COG1309@2|Bacteria,4NIBT@976|Bacteroidetes	976|Bacteroidetes	K	transcriptional regulator	-	-	-	-	-	-	-	-	-	-	-	-	TetR_N
BYD3_k127_7731410_32	1237149.C900_00113	1.276e-128	430.0	COG4251@1|root,COG4251@2|Bacteria,4NE3J@976|Bacteroidetes	976|Bacteroidetes	T	Histidine kinase	-	-	-	-	-	-	-	-	-	-	-	-	HATPase_c,HisKA,PAS_4,PAS_9
BYD3_k127_7731410_73	761193.Runsl_3114	2.59e-40	153.0	COG2199@1|root,COG3706@2|Bacteria	2|Bacteria	T	GGDEF domain	-	-	-	ko:K03413,ko:K07814	ko02020,ko02030,map02020,map02030	M00506	-	-	ko00000,ko00001,ko00002,ko02022,ko02035	-	-	-	Response_reg
BYD3_k127_7731410_66	1237149.C900_04166	4.49e-45	170.0	2FKBG@1|root,34BYZ@2|Bacteria,4P6N9@976|Bacteroidetes	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_7731410_37	1123248.KB893325_gene1155	3.979e-118	389.0	COG2334@1|root,COG2334@2|Bacteria,4NH00@976|Bacteroidetes,1INVB@117747|Sphingobacteriia	976|Bacteroidetes	S	PFAM Aminoglycoside phosphotransferase	mdsC	-	-	-	-	-	-	-	-	-	-	-	APH
BYD3_k127_7731410_6	1550091.JROE01000002_gene1138	1.019e-276	871.0	COG1629@1|root,COG4771@2|Bacteria,4PKE0@976|Bacteroidetes,1IRNN@117747|Sphingobacteriia	976|Bacteroidetes	P	COGs COG1629 Outer membrane receptor protein mostly Fe transport	-	-	-	ko:K02014	-	-	-	-	ko00000,ko02000	1.B.14	-	-	CarbopepD_reg_2,Plug,TonB_dep_Rec
BYD3_k127_7731410_59	471854.Dfer_4751	6.388e-56	202.0	COG3467@1|root,COG3467@2|Bacteria	2|Bacteria	T	pyridoxamine 5'-phosphate	-	-	-	ko:K07005	-	-	-	-	ko00000	-	-	-	Pyridox_ox_2
BYD3_k127_7731410_60	1121931.AUHG01000015_gene1206	4.413e-52	194.0	COG3358@1|root,COG3358@2|Bacteria,4NNWJ@976|Bacteroidetes,1I20T@117743|Flavobacteriia	976|Bacteroidetes	S	Protein of unknown function (DUF1684)	-	-	-	ko:K09164	-	-	-	-	ko00000	-	-	-	DUF1684
BYD3_k127_7731410_43	1237149.C900_00936	4.87e-105	347.0	COG4783@1|root,COG4783@2|Bacteria,4PKN7@976|Bacteroidetes,47YC0@768503|Cytophagia	976|Bacteroidetes	S	Peptidase family M48	-	-	-	-	-	-	-	-	-	-	-	-	Peptidase_M48
BYD3_k127_7731410_82	700598.Niako_5826	7.601e-24	104.0	COG0745@1|root,COG0745@2|Bacteria	700598.Niako_5826|-	T	phosphorelay signal transduction system	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_7731410_0	1123393.KB891326_gene42	0.0	3379.0	COG3459@1|root,COG3459@2|Bacteria,1MVNX@1224|Proteobacteria,2VKDG@28216|Betaproteobacteria,1KSRI@119069|Hydrogenophilales	119069|Hydrogenophilales	G	Glycosyl hydrolase 36 superfamily, catalytic domain	-	-	-	-	-	-	-	-	-	-	-	-	Glyco_hydro_36,Glyco_transf_36,Glycoamylase
BYD3_k127_7731410_54	1122179.KB890418_gene3749	7.69e-64	224.0	COG0179@1|root,COG0179@2|Bacteria,4NGCT@976|Bacteroidetes,1INU6@117747|Sphingobacteriia	976|Bacteroidetes	Q	PFAM fumarylacetoacetate (FAA) hydrolase	fahA	-	-	-	-	-	-	-	-	-	-	-	FAA_hydrolase
BYD3_k127_7731410_22	1237149.C900_00938	1.251e-154	510.0	COG0739@1|root,COG0739@2|Bacteria,4NED7@976|Bacteroidetes,47JZB@768503|Cytophagia	976|Bacteroidetes	M	PFAM Peptidase family M23	-	-	-	-	-	-	-	-	-	-	-	-	Peptidase_M23
BYD3_k127_7731410_50	1237149.C900_05652	4.634e-70	239.0	COG1225@1|root,COG1225@2|Bacteria,4NNGK@976|Bacteroidetes,47PUA@768503|Cytophagia	976|Bacteroidetes	O	PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen	bcp	-	1.11.1.15	ko:K03564	-	-	-	-	ko00000,ko01000	-	-	-	AhpC-TSA
BYD3_k127_7731410_24	1237149.C900_00612	1.296e-147	480.0	COG2304@1|root,COG2304@2|Bacteria,4NJF1@976|Bacteroidetes,47MRQ@768503|Cytophagia	976|Bacteroidetes	S	PFAM von Willebrand factor type A domain	-	-	-	ko:K07114	-	-	-	-	ko00000,ko02000	1.A.13.2.2,1.A.13.2.3	-	-	VWA,VWA_2
BYD3_k127_7731410_23	485918.Cpin_0752	1.013e-150	491.0	COG1502@1|root,COG1502@2|Bacteria,4NE2W@976|Bacteroidetes,1IQ27@117747|Sphingobacteriia	976|Bacteroidetes	I	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol	cls	-	-	ko:K06131	ko00564,ko01100,map00564,map01100	-	R07390	RC00017	ko00000,ko00001,ko01000	-	-	-	PLDc_2,PLDc_N
BYD3_k127_7731410_52	700598.Niako_4443	6.146e-69	242.0	COG2227@1|root,COG2227@2|Bacteria,4PKUR@976|Bacteroidetes,1J0TH@117747|Sphingobacteriia	976|Bacteroidetes	H	Thiopurine S-methyltransferase (TPMT)	-	-	-	-	-	-	-	-	-	-	-	-	Methyltransf_23,Methyltransf_25,Methyltransf_31
BYD3_k127_7731410_87	866536.Belba_2768	1.51e-14	81.0	COG3795@1|root,COG3795@2|Bacteria,4NPPF@976|Bacteroidetes,47SU4@768503|Cytophagia	976|Bacteroidetes	S	DoxX-like family	-	-	-	-	-	-	-	-	-	-	-	-	DoxX_2
BYD3_k127_7731410_64	153721.MYP_3136	4.07e-50	184.0	COG0664@1|root,COG0664@2|Bacteria,4NM4K@976|Bacteroidetes,47PUR@768503|Cytophagia	976|Bacteroidetes	K	Cyclic nucleotide-monophosphate binding domain	-	-	-	-	-	-	-	-	-	-	-	-	Crp,cNMP_binding
BYD3_k127_7731410_80	929556.Solca_0652	1.059e-32	131.0	COG3324@1|root,COG3324@2|Bacteria,4NMFV@976|Bacteroidetes,1IYT5@117747|Sphingobacteriia	976|Bacteroidetes	S	Glyoxalase-like domain	-	-	-	ko:K06996	-	-	-	-	ko00000	-	-	-	Glyoxalase
BYD3_k127_7731410_70	269798.CHU_1513	7.893e-43	158.0	COG0640@1|root,COG0640@2|Bacteria,4NQK3@976|Bacteroidetes,47R2A@768503|Cytophagia	976|Bacteroidetes	K	PFAM Bacterial regulatory protein, arsR family	-	-	-	-	-	-	-	-	-	-	-	-	HTH_20,HTH_5
BYD3_k127_7731410_84	1282360.ABAC460_23740	4.196e-21	99.0	COG1246@1|root,COG1246@2|Bacteria,1NBIV@1224|Proteobacteria,2UGMF@28211|Alphaproteobacteria,2KJ38@204458|Caulobacterales	204458|Caulobacterales	E	Acetyltransferase (GNAT) domain	-	-	-	-	-	-	-	-	-	-	-	-	Acetyltransf_1
BYD3_k127_7731410_58	1406840.Q763_06415	3.431e-58	205.0	COG0394@1|root,COG0394@2|Bacteria,4NNN6@976|Bacteroidetes,1I2XM@117743|Flavobacteriia,2NW88@237|Flavobacterium	976|Bacteroidetes	T	Belongs to the low molecular weight phosphotyrosine protein phosphatase family	arsC	-	1.20.4.1	ko:K03741	-	-	-	-	ko00000,ko01000	-	-	-	LMWPc
BYD3_k127_7731410_5	1237149.C900_01327	1.573e-302	938.0	COG0111@1|root,COG0560@1|root,COG0111@2|Bacteria,COG0560@2|Bacteria,4NDVN@976|Bacteroidetes,47MQ2@768503|Cytophagia	976|Bacteroidetes	EH	PFAM D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain	serA	-	1.1.1.399,1.1.1.95	ko:K00058	ko00260,ko00680,ko01100,ko01120,ko01130,ko01200,ko01230,map00260,map00680,map01100,map01120,map01130,map01200,map01230	M00020	R01513	RC00031	ko00000,ko00001,ko00002,ko01000,ko04147	-	-	-	2-Hacid_dh,2-Hacid_dh_C,HAD
BYD3_k127_7731410_85	216432.CA2559_11293	1.803e-16	81.0	2E6MT@1|root,3318D@2|Bacteria,4NW5M@976|Bacteroidetes,1I51K@117743|Flavobacteriia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_7731410_69	1123248.KB893317_gene4335	2.646e-43	164.0	COG1546@1|root,COG1546@2|Bacteria,4NVPM@976|Bacteroidetes	976|Bacteroidetes	S	Belongs to the CinA family	-	-	3.5.1.42	ko:K03742	ko00760,map00760	-	R02322	RC00100	ko00000,ko00001,ko01000	-	-	-	CinA
BYD3_k127_7731410_16	485918.Cpin_5049	8.935e-189	602.0	COG0665@1|root,COG0723@1|root,COG0665@2|Bacteria,COG0723@2|Bacteria,4NFT6@976|Bacteroidetes,1IQRJ@117747|Sphingobacteriia	976|Bacteroidetes	CE	PFAM FAD dependent oxidoreductase	-	-	-	-	-	-	-	-	-	-	-	-	DAO,Rieske
BYD3_k127_7731410_45	1121481.AUAS01000011_gene4977	2.695e-95	321.0	COG1597@1|root,COG1597@2|Bacteria,4NKR1@976|Bacteroidetes,47R40@768503|Cytophagia	976|Bacteroidetes	I	Diacylglycerol kinase catalytic domain	-	-	-	-	-	-	-	-	-	-	-	-	DAGK_cat
BYD3_k127_7731410_34	1185876.BN8_06423	3.455e-123	398.0	COG0496@1|root,COG0496@2|Bacteria,4NGJN@976|Bacteroidetes,47M32@768503|Cytophagia	976|Bacteroidetes	S	Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates	-	-	3.1.3.5	ko:K03787	ko00230,ko00240,ko00760,ko01100,ko01110,map00230,map00240,map00760,map01100,map01110	-	R00183,R00511,R00963,R01126,R01227,R01569,R01664,R01968,R02088,R02102,R02323,R02719,R03346	RC00017	ko00000,ko00001,ko01000	-	-	-	SurE
BYD3_k127_7731410_75	153721.MYP_3443	2.702e-38	146.0	COG1393@1|root,COG1393@2|Bacteria,4NSJ5@976|Bacteroidetes,47R1A@768503|Cytophagia	976|Bacteroidetes	P	Belongs to the ArsC family	-	-	-	-	-	-	-	-	-	-	-	-	ArsC
BYD3_k127_7731410_20	1237149.C900_03306	4.124e-166	527.0	COG2876@1|root,COG2876@2|Bacteria,4NH82@976|Bacteroidetes,47KY7@768503|Cytophagia	976|Bacteroidetes	E	PFAM DAHP synthetase I family	-	-	2.5.1.54	ko:K03856	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	M00022	R01826	RC00435	ko00000,ko00001,ko00002,ko01000	-	-	-	DAHP_synth_1
BYD3_k127_7731410_44	880070.Cycma_3113	1.418e-96	322.0	COG0159@1|root,COG0159@2|Bacteria,4NE21@976|Bacteroidetes,47JYN@768503|Cytophagia	976|Bacteroidetes	E	The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate	trpA	-	4.2.1.20	ko:K01695	ko00260,ko00400,ko01100,ko01110,ko01130,ko01230,map00260,map00400,map01100,map01110,map01130,map01230	M00023	R00674,R02340,R02722	RC00209,RC00210,RC00700,RC00701,RC02868	ko00000,ko00001,ko00002,ko01000	-	-	-	Trp_syntA
BYD3_k127_7731410_12	1237149.C900_03304	6.863e-208	652.0	COG0133@1|root,COG0133@2|Bacteria,4NDWP@976|Bacteroidetes,47KSV@768503|Cytophagia	976|Bacteroidetes	E	The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine	trpB	-	4.2.1.20,5.3.1.24	ko:K01696,ko:K01817	ko00260,ko00400,ko01100,ko01110,ko01130,ko01230,map00260,map00400,map01100,map01110,map01130,map01230	M00023	R00674,R02340,R02722,R03509	RC00209,RC00210,RC00700,RC00701,RC00945,RC02868	ko00000,ko00001,ko00002,ko01000	-	-	-	PALP
BYD3_k127_7731410_56	504472.Slin_5476	3.272e-60	214.0	COG0135@1|root,COG0135@2|Bacteria,4NNQ1@976|Bacteroidetes,47N69@768503|Cytophagia	976|Bacteroidetes	E	Belongs to the TrpF family	trpF	-	5.3.1.24	ko:K01817	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	M00023	R03509	RC00945	ko00000,ko00001,ko00002,ko01000	-	-	-	PRAI
BYD3_k127_7731410_38	1124780.ANNU01000065_gene466	7.073e-111	364.0	COG0134@1|root,COG0134@2|Bacteria,4NFJT@976|Bacteroidetes,47JRX@768503|Cytophagia	976|Bacteroidetes	E	Belongs to the TrpC family	trpC	GO:0003674,GO:0003824,GO:0004425,GO:0016829,GO:0016830,GO:0016831	4.1.1.48	ko:K01609	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	M00023	R03508	RC00944	ko00000,ko00001,ko00002,ko01000	-	-	-	IGPS
BYD3_k127_7731410_28	1237149.C900_03301	5.626e-143	461.0	COG0547@1|root,COG0547@2|Bacteria,4NH2J@976|Bacteroidetes,47KKR@768503|Cytophagia	976|Bacteroidetes	E	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)	trpD	GO:0000162,GO:0003674,GO:0003824,GO:0004048,GO:0006082,GO:0006520,GO:0006568,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009308,GO:0009309,GO:0009987,GO:0016053,GO:0016740,GO:0016757,GO:0016763,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0042401,GO:0042430,GO:0042435,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046219,GO:0046394,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607	2.4.2.18,4.1.3.27	ko:K00766,ko:K13497	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	M00023	R00985,R00986,R01073	RC00010,RC00440,RC02148,RC02414	ko00000,ko00001,ko00002,ko01000	-	-	-	Glycos_trans_3N,Glycos_transf_3
BYD3_k127_7731410_49	504472.Slin_5473	5.672e-77	261.0	COG0512@1|root,COG0512@2|Bacteria,4NE4I@976|Bacteroidetes,47JZQ@768503|Cytophagia	976|Bacteroidetes	EH	TIGRFAM glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase	pabA	-	4.1.3.27	ko:K01658	ko00400,ko00405,ko01100,ko01110,ko01130,ko01230,ko02024,ko02025,map00400,map00405,map01100,map01110,map01130,map01230,map02024,map02025	M00023	R00985,R00986	RC00010,RC02148,RC02414	ko00000,ko00001,ko00002,ko01000	-	-	-	GATase
BYD3_k127_7731410_78	1239962.C943_04354	4.833e-34	134.0	COG0399@1|root,COG0399@2|Bacteria,4NSX7@976|Bacteroidetes,47SM9@768503|Cytophagia	976|Bacteroidetes	M	23S rRNA-intervening sequence protein	-	-	-	-	-	-	-	-	-	-	-	-	23S_rRNA_IVP
BYD3_k127_7731410_17	153721.MYP_1783	1.082e-186	593.0	COG0147@1|root,COG0147@2|Bacteria,4NFQ5@976|Bacteroidetes,47JMA@768503|Cytophagia	976|Bacteroidetes	EH	Anthranilate synthase component I, N terminal region	trpE	-	4.1.3.27	ko:K01657	ko00400,ko00405,ko01100,ko01110,ko01130,ko01230,ko02024,ko02025,map00400,map00405,map01100,map01110,map01130,map01230,map02024,map02025	M00023	R00985,R00986	RC00010,RC02148,RC02414	ko00000,ko00001,ko00002,ko01000	-	-	-	Anth_synt_I_N,Chorismate_bind
BYD3_k127_7731410_7	1237149.C900_03297	7.442e-276	863.0	COG3590@1|root,COG3590@2|Bacteria,4NEYB@976|Bacteroidetes,47JHJ@768503|Cytophagia	976|Bacteroidetes	O	PFAM peptidase M13	pepO	-	3.4.24.71	ko:K01415,ko:K07386	-	-	-	-	ko00000,ko01000,ko01002,ko04147	-	-	-	Peptidase_M13,Peptidase_M13_N
BYD3_k127_7731410_79	1250232.JQNJ01000001_gene696	1.426e-33	138.0	28P2C@1|root,2ZBYG@2|Bacteria,4NMEQ@976|Bacteroidetes,1I19G@117743|Flavobacteriia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_7731410_10	1237149.C900_04087	5.913e-247	788.0	COG0577@1|root,COG0577@2|Bacteria,4NDUK@976|Bacteroidetes	976|Bacteroidetes	V	permease	-	-	-	ko:K02004	-	M00258	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	FtsX,MacB_PCD
BYD3_k127_7731410_18	1121930.AQXG01000008_gene209	9.566e-185	604.0	COG0577@1|root,COG0577@2|Bacteria,4NDUK@976|Bacteroidetes	976|Bacteroidetes	V	permease	-	-	-	-	-	-	-	-	-	-	-	-	FtsX,MacB_PCD
BYD3_k127_7731410_19	1185876.BN8_00893	2.355e-176	580.0	COG0577@1|root,COG0577@2|Bacteria,4NDUK@976|Bacteroidetes,47NN0@768503|Cytophagia	976|Bacteroidetes	V	MacB-like periplasmic core domain	-	-	-	-	-	-	-	-	-	-	-	-	FtsX,MacB_PCD
BYD3_k127_7731410_13	1237149.C900_04089	3.423e-200	632.0	COG2204@1|root,COG2204@2|Bacteria,4NE89@976|Bacteroidetes,47JF9@768503|Cytophagia	976|Bacteroidetes	T	two component, sigma54 specific, transcriptional regulator, Fis family	-	-	-	-	-	-	-	-	-	-	-	-	HTH_8,Response_reg,Sigma54_activat
BYD3_k127_7731410_36	1237149.C900_00659	2.677e-119	397.0	COG5000@1|root,COG5000@2|Bacteria,4NEWF@976|Bacteroidetes,47JZG@768503|Cytophagia	976|Bacteroidetes	T	Histidine kinase	-	-	-	-	-	-	-	-	-	-	-	-	HATPase_c,PAS_8
BYD3_k127_7731410_39	926549.KI421517_gene1259	1.303e-107	356.0	COG0656@1|root,COG0656@2|Bacteria,4NK47@976|Bacteroidetes,47MZY@768503|Cytophagia	976|Bacteroidetes	S	Aldo/keto reductase family	-	-	-	-	-	-	-	-	-	-	-	-	Aldo_ket_red
BYD3_k127_7731410_2	1121904.ARBP01000006_gene4017	0.0	1364.0	COG4206@1|root,COG4206@2|Bacteria,4P258@976|Bacteroidetes,47NYH@768503|Cytophagia	976|Bacteroidetes	H	TonB-dependent Receptor Plug Domain	-	-	-	-	-	-	-	-	-	-	-	-	CarbopepD_reg_2,Plug,STN,TonB_dep_Rec
BYD3_k127_7731410_26	1121904.ARBP01000006_gene4018	2.032e-145	475.0	COG0388@1|root,COG0388@2|Bacteria,4NFF2@976|Bacteroidetes,47NPY@768503|Cytophagia	976|Bacteroidetes	S	Pfam:SusD	-	-	-	ko:K21572	-	-	-	-	ko00000,ko02000	8.A.46.1,8.A.46.3	-	-	SusD-like_3,SusD_RagB
BYD3_k127_7731410_48	1121904.ARBP01000006_gene4019	4.287e-87	296.0	28KH3@1|root,2ZA2M@2|Bacteria,4NKS0@976|Bacteroidetes,47PKU@768503|Cytophagia	976|Bacteroidetes	S	Putative zinc-binding metallo-peptidase	-	-	-	-	-	-	-	-	-	-	-	-	Peptidase_Mx1
BYD3_k127_7731410_88	1291050.JAGE01000001_gene750	2.266e-11	76.0	COG2373@1|root,COG3210@1|root,COG2373@2|Bacteria,COG3210@2|Bacteria,1VRAF@1239|Firmicutes,24BEM@186801|Clostridia	186801|Clostridia	U	Calx-beta domain	-	-	-	-	-	-	-	-	-	-	-	-	Calx-beta,SLH
BYD3_k127_7731410_9	1185876.BN8_00862	1.901e-263	838.0	COG0577@1|root,COG0577@2|Bacteria,4P1TM@976|Bacteroidetes,47UF9@768503|Cytophagia	976|Bacteroidetes	V	MacB-like periplasmic core domain	-	-	-	-	-	-	-	-	-	-	-	-	FtsX,MacB_PCD
BYD3_k127_7731410_67	1237149.C900_04428	2.069e-44	164.0	COG1695@1|root,COG1695@2|Bacteria,4P48E@976|Bacteroidetes,47V9J@768503|Cytophagia	976|Bacteroidetes	K	Transcriptional regulator PadR-like family	-	-	-	-	-	-	-	-	-	-	-	-	PadR
BYD3_k127_7731410_14	1279009.ADICEAN_03468	2.775e-190	605.0	COG3263@1|root,COG3263@2|Bacteria,4NFNS@976|Bacteroidetes,47P2K@768503|Cytophagia	976|Bacteroidetes	P	TrkA-C domain	cvrA	-	-	ko:K11105	-	-	-	-	ko00000,ko02000	2.A.36.6	-	-	Na_H_Exchanger,TrkA_C
BYD3_k127_7731410_86	1121904.ARBP01000011_gene1411	3.049e-16	85.0	COG1393@1|root,COG1393@2|Bacteria	2|Bacteria	P	arsenate reductase (glutaredoxin) activity	arsC	GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464	1.20.4.1	ko:K00537	-	-	-	-	ko00000,ko01000	-	-	-	ArsC
BYD3_k127_7731410_62	643867.Ftrac_2175	1.437e-51	189.0	COG0783@1|root,COG0783@2|Bacteria,4NQD2@976|Bacteroidetes,47XQU@768503|Cytophagia	976|Bacteroidetes	P	Belongs to the Dps family	-	-	-	ko:K04047	-	-	-	-	ko00000,ko03036	-	-	-	Ferritin
BYD3_k127_7731410_83	1123278.KB893578_gene1276	5.37e-23	107.0	COG3652@1|root,COG3652@2|Bacteria,4NQE9@976|Bacteroidetes,47QZE@768503|Cytophagia	976|Bacteroidetes	S	Domain of unknown function (DUF4142)	-	-	-	ko:K08995	-	-	-	-	ko00000	-	-	-	DUF4142
BYD3_k127_7731410_53	880070.Cycma_4909	6.929e-66	231.0	COG2755@1|root,COG2755@2|Bacteria,4NMGQ@976|Bacteroidetes,47QU7@768503|Cytophagia	976|Bacteroidetes	E	GDSL-like Lipase/Acylhydrolase family	-	-	-	-	-	-	-	-	-	-	-	-	Lipase_GDSL_2
BYD3_k127_7731410_72	324057.Pjdr2_2693	8.357e-42	158.0	COG0454@1|root,COG0456@2|Bacteria,1VBAE@1239|Firmicutes	1239|Firmicutes	K	PFAM Acetyltransferase (GNAT) family	-	-	-	-	-	-	-	-	-	-	-	-	Acetyltransf_1,Acetyltransf_7
BYD3_k127_7731410_27	866536.Belba_1786	5.323e-143	459.0	COG0031@1|root,COG0031@2|Bacteria,4NF7E@976|Bacteroidetes,47J9D@768503|Cytophagia	976|Bacteroidetes	E	Belongs to the cysteine synthase cystathionine beta- synthase family	cysM	-	2.5.1.47	ko:K12339	ko00270,ko00920,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00270,map00920,map01100,map01110,map01120,map01130,map01200,map01230	M00021	R00897,R03132,R03601,R04859	RC00020,RC02814,RC02821,RC02876	ko00000,ko00001,ko00002,ko01000	-	-	-	PALP
BYD3_k127_7731410_40	1237149.C900_04081	1.601e-107	355.0	COG1045@1|root,COG1045@2|Bacteria,4NGZ7@976|Bacteroidetes,47JAY@768503|Cytophagia	976|Bacteroidetes	E	serine acetyltransferase	cysE	-	2.3.1.30	ko:K00640	ko00270,ko00920,ko01100,ko01110,ko01120,ko01200,ko01230,ko05111,map00270,map00920,map01100,map01110,map01120,map01200,map01230,map05111	M00021	R00586	RC00004,RC00041	ko00000,ko00001,ko00002,ko01000	-	-	-	Hexapep,SATase_N
BYD3_k127_7731410_21	1123276.KB893245_gene1455	1.856e-157	529.0	COG0577@1|root,COG0577@2|Bacteria,4NDUK@976|Bacteroidetes,47NTJ@768503|Cytophagia	976|Bacteroidetes	V	MacB-like periplasmic core domain	-	-	-	ko:K02004	-	M00258	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	FtsX,MacB_PCD
BYD3_k127_7731410_8	1121904.ARBP01000004_gene1059	5.558e-273	865.0	COG0577@1|root,COG0577@2|Bacteria,4NDUK@976|Bacteroidetes,47NTJ@768503|Cytophagia	976|Bacteroidetes	V	MacB-like periplasmic core domain	-	-	-	ko:K02004	-	M00258	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	FtsX,MacB_PCD
BYD3_k127_7731410_11	1249997.JHZW01000002_gene1496	5.801e-236	758.0	COG0577@1|root,COG0577@2|Bacteria,4NDUK@976|Bacteroidetes,1HX0V@117743|Flavobacteriia	976|Bacteroidetes	V	COG0577 ABC-type antimicrobial peptide transport system permease component	-	-	-	-	-	-	-	-	-	-	-	-	FtsX,MacB_PCD
BYD3_k127_7731410_81	1237149.C900_04428	8.603e-26	107.0	COG1695@1|root,COG1695@2|Bacteria,4P48E@976|Bacteroidetes,47V9J@768503|Cytophagia	976|Bacteroidetes	K	Transcriptional regulator PadR-like family	-	-	-	-	-	-	-	-	-	-	-	-	PadR
BYD3_k127_7741636_5	1239962.C943_03586	8.519e-172	545.0	COG0662@1|root,COG3837@1|root,COG0662@2|Bacteria,COG3837@2|Bacteria,4NHX8@976|Bacteroidetes,47UCJ@768503|Cytophagia	976|Bacteroidetes	G	Cupin domain	-	-	-	-	-	-	-	-	-	-	-	-	Cupin_2
BYD3_k127_7741636_1	760192.Halhy_0732	0.0	1196.0	COG2010@1|root,COG4993@1|root,COG2010@2|Bacteria,COG4993@2|Bacteria,4NFK0@976|Bacteroidetes,1IQUR@117747|Sphingobacteriia	976|Bacteroidetes	C	Pyrrolo-quinoline quinone	-	-	-	-	-	-	-	-	-	-	-	-	Cytochrome_CBB3,PQQ
BYD3_k127_7741636_23	1123057.P872_21170	0.0002096	46.0	COG3631@1|root,COG3631@2|Bacteria	2|Bacteria	S	light absorption	tauX	-	-	ko:K07255,ko:K21700	ko00430,map00430	-	R01685	RC00062	ko00000,ko00001,ko01000	-	-	-	SnoaL_2
BYD3_k127_7741636_20	1123057.P872_21170	1.095e-12	67.0	COG3631@1|root,COG3631@2|Bacteria	2|Bacteria	S	light absorption	tauX	-	-	ko:K07255,ko:K21700	ko00430,map00430	-	R01685	RC00062	ko00000,ko00001,ko01000	-	-	-	SnoaL_2
BYD3_k127_7741636_8	1120965.AUBV01000004_gene1033	1.005e-139	451.0	COG2010@1|root,COG2010@2|Bacteria,4NMGT@976|Bacteroidetes	976|Bacteroidetes	C	Cytochrome c	-	-	-	-	-	-	-	-	-	-	-	-	Cytochrom_C
BYD3_k127_7741636_12	1202532.FF52_13571	2.285e-94	317.0	2EIJH@1|root,33CAU@2|Bacteria,4PD0M@976|Bacteroidetes,1IDIN@117743|Flavobacteriia,2NYIG@237|Flavobacterium	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_7741636_0	1121875.KB907549_gene1997	0.0	1556.0	COG3408@1|root,COG3408@2|Bacteria,4PKJG@976|Bacteroidetes,1IJAW@117743|Flavobacteriia	976|Bacteroidetes	G	Glycosyl hydrolase family 63 C-terminal domain	-	-	-	-	-	-	-	-	-	-	-	-	Glyco_hydro_63
BYD3_k127_7741636_10	1121904.ARBP01000011_gene1484	1.434e-129	464.0	COG2911@1|root,COG2911@2|Bacteria,4NF7F@976|Bacteroidetes,47JE0@768503|Cytophagia	976|Bacteroidetes	M	PFAM Family of	-	-	-	-	-	-	-	-	-	-	-	-	TamB
BYD3_k127_7741636_6	1121904.ARBP01000011_gene1483	5.643e-155	515.0	COG4775@1|root,COG4775@2|Bacteria,4NE80@976|Bacteroidetes,47KRB@768503|Cytophagia	976|Bacteroidetes	M	Outer membrane protein protective antigen OMA87	-	-	-	-	-	-	-	-	-	-	-	-	Bac_surface_Ag
BYD3_k127_7741636_4	760192.Halhy_2051	6.911e-218	717.0	COG0642@1|root,COG0745@1|root,COG2114@1|root,COG3292@1|root,COG0745@2|Bacteria,COG2114@2|Bacteria,COG2205@2|Bacteria,COG3292@2|Bacteria	2|Bacteria	T	PhoQ Sensor	-	-	4.6.1.1	ko:K01768,ko:K16923,ko:K19694	ko00230,ko02025,ko04113,ko04213,map00230,map02025,map04113,map04213	M00582,M00695	R00089,R00434	RC00295	ko00000,ko00001,ko00002,ko01000,ko01001,ko02000,ko02022	3.A.1.28	-	-	7TMR-DISM_7TM,Guanylate_cyc,HAMP,HATPase_c,HisKA,Reg_prop,Response_reg,Y_Y_Y
BYD3_k127_7741636_13	1239962.C943_04282	5.227e-63	222.0	COG2197@1|root,COG2197@2|Bacteria,4NHTM@976|Bacteroidetes,47PWE@768503|Cytophagia	976|Bacteroidetes	KT	Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain	-	-	-	-	-	-	-	-	-	-	-	-	GerE,Response_reg
BYD3_k127_7741636_17	1250005.PHEL85_2292	6.139e-22	105.0	COG0589@1|root,COG0589@2|Bacteria,4NHXF@976|Bacteroidetes,1HY7W@117743|Flavobacteriia,3VVV0@52959|Polaribacter	976|Bacteroidetes	T	Universal stress protein family	-	-	-	-	-	-	-	-	-	-	-	-	Usp
BYD3_k127_7741636_18	926549.KI421517_gene2854	2.057e-15	77.0	2EEZ4@1|root,338SA@2|Bacteria,4NW9N@976|Bacteroidetes	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_7741636_2	1123057.P872_18735	3.298e-285	879.0	COG0673@1|root,COG0673@2|Bacteria,4NEN5@976|Bacteroidetes,47JNX@768503|Cytophagia	976|Bacteroidetes	S	PFAM Oxidoreductase family, NAD-binding Rossmann fold	-	-	-	-	-	-	-	-	-	-	-	-	GFO_IDH_MocA,GFO_IDH_MocA_C
BYD3_k127_7741636_11	1250232.JQNJ01000001_gene1365	4.864e-122	400.0	COG4977@1|root,COG4977@2|Bacteria,4NGSR@976|Bacteroidetes,1HZKB@117743|Flavobacteriia	976|Bacteroidetes	K	AraC family transcriptional regulator	-	-	-	-	-	-	-	-	-	-	-	-	DJ-1_PfpI,HTH_18
BYD3_k127_7741636_7	1250232.JQNJ01000001_gene1364	5.539e-152	492.0	COG2346@1|root,COG4922@1|root,COG2346@2|Bacteria,COG4922@2|Bacteria,4NJF0@976|Bacteroidetes,1I37Y@117743|Flavobacteriia	976|Bacteroidetes	S	SnoaL-like domain	-	-	-	-	-	-	-	-	-	-	-	-	SnoaL,SnoaL_2
BYD3_k127_7741636_15	1120977.JHUX01000003_gene1570	7.858e-56	202.0	COG0500@1|root,COG2226@2|Bacteria,1RKZF@1224|Proteobacteria,1SIV2@1236|Gammaproteobacteria,3NMGZ@468|Moraxellaceae	1236|Gammaproteobacteria	Q	O-methyltransferase	-	-	-	-	-	-	-	-	-	-	-	-	Methyltransf_31
BYD3_k127_7741636_9	1450525.JATV01000006_gene877	1.062e-133	430.0	COG1408@1|root,COG1408@2|Bacteria,4NHFE@976|Bacteroidetes,1HYUQ@117743|Flavobacteriia	976|Bacteroidetes	S	Phosphoesterase	-	-	-	ko:K07098	-	-	-	-	ko00000	-	-	-	Metallophos
BYD3_k127_7741636_21	468059.AUHA01000009_gene2808	5.367e-06	48.0	2DVV0@1|root,33XAI@2|Bacteria,4NYRI@976|Bacteroidetes,1IUE9@117747|Sphingobacteriia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_7741636_19	657309.BXY_41610	4.723e-13	74.0	2APBA@1|root,31EDH@2|Bacteria,4NSFA@976|Bacteroidetes,2FS29@200643|Bacteroidia,4AQMU@815|Bacteroidaceae	976|Bacteroidetes	S	COG NOG29214 non supervised orthologous group	-	-	-	-	-	-	-	-	-	-	-	-	DUF2007
BYD3_k127_7741636_3	1267211.KI669560_gene1365	1.429e-225	709.0	COG1866@1|root,COG1866@2|Bacteria,4NEGI@976|Bacteroidetes,1INP6@117747|Sphingobacteriia	976|Bacteroidetes	C	Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA	pckA	-	4.1.1.49	ko:K01610	ko00010,ko00020,ko00620,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00020,map00620,map00710,map01100,map01110,map01120,map01130,map01200	M00003,M00170	R00341	RC00002,RC02741	ko00000,ko00001,ko00002,ko01000	-	-	-	PEPCK_ATP
BYD3_k127_7751031_0	1296415.JACC01000030_gene2778	3.492e-149	498.0	COG0457@1|root,COG2972@1|root,COG0457@2|Bacteria,COG2972@2|Bacteria,4NF45@976|Bacteroidetes,1HXAW@117743|Flavobacteriia,2YGNW@290174|Aquimarina	976|Bacteroidetes	T	Tetratricopeptide repeat	-	-	-	-	-	-	-	-	-	-	-	-	His_kinase,TPR_10,TPR_12,TPR_7,TPR_8
BYD3_k127_7751031_2	1296415.JACC01000030_gene2779	4.534e-85	288.0	COG3279@1|root,COG3279@2|Bacteria,4NFPV@976|Bacteroidetes,1I0QN@117743|Flavobacteriia,2YJJY@290174|Aquimarina	976|Bacteroidetes	T	LytTr DNA-binding domain	-	-	-	ko:K02477	-	-	-	-	ko00000,ko02022	-	-	-	LytTR,Response_reg
BYD3_k127_7751031_3	1250232.JQNJ01000001_gene3634	1.304e-15	90.0	COG2834@1|root,COG3291@1|root,COG5492@1|root,COG2834@2|Bacteria,COG3291@2|Bacteria,COG5492@2|Bacteria,4P2UU@976|Bacteroidetes,1HYAX@117743|Flavobacteriia	976|Bacteroidetes	DZ	TIGRFAM Bacterial surface protein 26-residue repeat	-	-	-	-	-	-	-	-	-	-	-	-	CHU_C,Cadherin,DUF285,TIG,TSP_3
BYD3_k127_7751031_1	1296416.JACB01000031_gene2502	4.681e-107	365.0	COG3391@1|root,COG5184@1|root,COG3391@2|Bacteria,COG5184@2|Bacteria,4NNEF@976|Bacteroidetes,1I6BT@117743|Flavobacteriia,2YK9M@290174|Aquimarina	976|Bacteroidetes	DZ	ig-like, plexins, transcription factors	-	-	-	-	-	-	-	-	-	-	-	-	NHL,TIG
BYD3_k127_7751031_4	1121481.AUAS01000002_gene3603	5.438e-09	59.0	COG0025@1|root,COG0025@2|Bacteria,4PID8@976|Bacteroidetes,47JCI@768503|Cytophagia	976|Bacteroidetes	P	Sodium/hydrogen exchanger family	-	-	-	-	-	-	-	-	-	-	-	-	Na_H_Exchanger
BYD3_k127_7886_3	760192.Halhy_0495	5.275e-143	457.0	COG3828@1|root,COG3828@2|Bacteria	2|Bacteria	N	Trehalose utilisation	-	-	-	-	-	-	-	-	-	-	-	-	ThuA
BYD3_k127_7886_1	504472.Slin_1412	7.832e-199	623.0	COG2382@1|root,COG2382@2|Bacteria,4NFVV@976|Bacteroidetes,47JT1@768503|Cytophagia	976|Bacteroidetes	P	Carbohydrate-binding module 48 (Isoamylase N-terminal domain)	-	-	-	ko:K07214	-	-	-	-	ko00000	-	-	-	CBM_48,Esterase
BYD3_k127_7886_0	504472.Slin_1416	4.623e-308	949.0	COG3664@1|root,COG3664@2|Bacteria,4NHQ0@976|Bacteroidetes,47N7Z@768503|Cytophagia	976|Bacteroidetes	G	PFAM glycoside hydrolase family 39	-	-	3.2.1.37	ko:K01198	ko00520,ko01100,map00520,map01100	-	R01433	RC00467	ko00000,ko00001,ko01000	-	GH43	-	Glyco_hydro_39
BYD3_k127_7886_2	1123277.KB893244_gene5190	5.87e-168	535.0	COG1554@1|root,COG1554@2|Bacteria,4NEWW@976|Bacteroidetes,47JFT@768503|Cytophagia	976|Bacteroidetes	G	Glycosyl hydrolase family 65, N-terminal domain	-	-	3.2.1.51	ko:K15923	ko00511,map00511	-	-	-	ko00000,ko00001,ko01000	-	GH95	-	Glyco_hyd_65N_2
BYD3_k127_7964228_19	1313421.JHBV01000029_gene1879	1.185e-32	144.0	COG3291@1|root,COG3291@2|Bacteria	2|Bacteria	S	metallopeptidase activity	-	-	-	-	-	-	-	-	-	-	-	-	CHU_C,Laminin_G_3,PKD,Peptidase_M43,SprB
BYD3_k127_7964228_22	755732.Fluta_3151	3.463e-26	124.0	COG3291@1|root,COG3794@1|root,COG3291@2|Bacteria,COG3794@2|Bacteria,4NW5Z@976|Bacteroidetes	976|Bacteroidetes	C	alginic acid biosynthetic process	-	-	-	-	-	-	-	-	-	-	-	-	CHU_C
BYD3_k127_7964228_8	1279009.ADICEAN_04205	1.333e-104	348.0	COG1092@1|root,COG1092@2|Bacteria,4NGJX@976|Bacteroidetes,47MFA@768503|Cytophagia	976|Bacteroidetes	J	S-adenosylmethionine-dependent methyltransferase	-	-	2.1.1.191	ko:K06969	-	-	-	-	ko00000,ko01000,ko03009	-	-	-	Methyltrans_SAM
BYD3_k127_7964228_2	1121129.KB903371_gene242	1.414e-289	898.0	COG1217@1|root,COG1217@2|Bacteria,4NDVM@976|Bacteroidetes,2FMNU@200643|Bacteroidia,22WPR@171551|Porphyromonadaceae	976|Bacteroidetes	T	GTP-binding protein TypA	typA	-	-	ko:K06207	-	-	-	-	ko00000	-	-	-	EFG_C,GTP_EFTU,GTP_EFTU_D2
BYD3_k127_7964228_25	1313421.JHBV01000014_gene3850	1.905e-08	65.0	COG3063@1|root,COG3063@2|Bacteria,4PP7G@976|Bacteroidetes	976|Bacteroidetes	NU	TPR repeat	-	-	-	-	-	-	-	-	-	-	-	-	TPR_2,TPR_8
BYD3_k127_7964228_13	1237149.C900_00541	2.9e-60	218.0	COG0589@1|root,COG0589@2|Bacteria,4NFZ5@976|Bacteroidetes,47PIA@768503|Cytophagia	976|Bacteroidetes	T	Universal stress protein	-	-	-	-	-	-	-	-	-	-	-	-	Usp
BYD3_k127_7964228_0	1237149.C900_04408	0.0	1794.0	COG1703@1|root,COG1884@1|root,COG2185@1|root,COG1703@2|Bacteria,COG1884@2|Bacteria,COG2185@2|Bacteria,4NFHX@976|Bacteroidetes,47KS7@768503|Cytophagia	976|Bacteroidetes	EI	Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly	icmF	-	5.4.99.13	ko:K11942	-	-	-	-	ko00000,ko01000	-	-	-	ArgK,B12-binding,MM_CoA_mutase
BYD3_k127_7964228_16	313606.M23134_00735	1.017e-49	192.0	COG2972@1|root,COG2972@2|Bacteria,4NH51@976|Bacteroidetes,47MBJ@768503|Cytophagia	976|Bacteroidetes	T	regulator of cell autolysis	-	-	-	-	-	-	-	-	-	-	-	-	HATPase_c_5,His_kinase
BYD3_k127_7964228_14	1279009.ADICEAN_01527	3.61e-60	215.0	COG3279@1|root,COG3279@2|Bacteria,4NF8S@976|Bacteroidetes,47JDI@768503|Cytophagia	976|Bacteroidetes	K	Response regulator of the LytR AlgR family	-	-	-	-	-	-	-	-	-	-	-	-	LytTR,Response_reg
BYD3_k127_7964228_9	1121481.AUAS01000008_gene3082	1.098e-92	322.0	COG3356@1|root,COG3356@2|Bacteria,4NGDG@976|Bacteroidetes,47JVE@768503|Cytophagia	976|Bacteroidetes	S	Neutral/alkaline non-lysosomal ceramidase, N-terminal	-	-	-	-	-	-	-	-	-	-	-	-	Ceramidase_alk
BYD3_k127_7964228_10	700598.Niako_6712	3.267e-92	310.0	COG0266@1|root,COG0266@2|Bacteria,4NH8P@976|Bacteroidetes,1IR2V@117747|Sphingobacteriia	976|Bacteroidetes	L	DNA glycosylase AP lyase, H2TH DNA-binding	-	-	4.2.99.18	ko:K05522	ko03410,map03410	-	-	-	ko00000,ko00001,ko01000,ko03400	-	-	-	Fapy_DNA_glyco,H2TH
BYD3_k127_7964228_24	1392498.JQLH01000001_gene2480	3.83e-14	80.0	29WJD@1|root,30I5R@2|Bacteria,4NPYW@976|Bacteroidetes,1I3HY@117743|Flavobacteriia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_7964228_23	1121870.AUAA01000031_gene3196	8.835e-23	100.0	COG4095@1|root,COG4095@2|Bacteria,4NUQW@976|Bacteroidetes,1I54S@117743|Flavobacteriia,3HIC0@358033|Chryseobacterium	976|Bacteroidetes	S	PQ loop repeat	-	-	-	ko:K15383	-	-	-	-	ko00000,ko02000	9.A.58.2	-	-	MtN3_slv,PQ-loop
BYD3_k127_7964228_1	1408813.AYMG01000039_gene2261	0.0	1097.0	COG1793@1|root,COG3285@1|root,COG1793@2|Bacteria,COG3285@2|Bacteria,4NESR@976|Bacteroidetes,1IQI9@117747|Sphingobacteriia	976|Bacteroidetes	L	DNA ligase	-	-	6.5.1.1	ko:K01971	ko03450,map03450	-	R00381	RC00005	ko00000,ko00001,ko01000,ko03400	-	-	-	DNA_ligase_A_C,DNA_ligase_A_M,LigD_N
BYD3_k127_7964228_5	1123234.AUKI01000016_gene3135	3.351e-153	496.0	COG2995@1|root,COG2995@2|Bacteria,4PQ19@976|Bacteroidetes,1I22G@117743|Flavobacteriia	976|Bacteroidetes	S	Paraquat-inducible protein A	-	-	-	-	-	-	-	-	-	-	-	-	PqiA
BYD3_k127_7964228_6	1120966.AUBU01000001_gene949	6.113e-129	420.0	COG2010@1|root,COG2010@2|Bacteria,4NHQV@976|Bacteroidetes,47N6X@768503|Cytophagia	976|Bacteroidetes	C	Cytochrome c	-	-	-	-	-	-	-	-	-	-	-	-	Cytochrom_C
BYD3_k127_7964228_18	1237149.C900_03640	9.149e-36	139.0	COG5470@1|root,COG5470@2|Bacteria,4NUEC@976|Bacteroidetes,47V9R@768503|Cytophagia	976|Bacteroidetes	S	Domain of unknown function (DUF1330)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1330
BYD3_k127_7964228_4	504472.Slin_3338	5.571e-206	644.0	COG2730@1|root,COG2730@2|Bacteria,4NGAC@976|Bacteroidetes,47MSS@768503|Cytophagia	976|Bacteroidetes	G	Belongs to the glycosyl hydrolase 5 (cellulase A) family	-	-	3.2.1.4	ko:K01179	ko00500,ko01100,map00500,map01100	-	R06200,R11307,R11308	-	ko00000,ko00001,ko01000	-	GH5,GH9	-	Cellulase
BYD3_k127_7964228_11	700598.Niako_3030	3.515e-90	306.0	COG2017@1|root,COG2017@2|Bacteria,4NMWB@976|Bacteroidetes,1IPFY@117747|Sphingobacteriia	976|Bacteroidetes	G	PFAM Aldose 1-epimerase	lacX	-	-	-	-	-	-	-	-	-	-	-	Aldose_epim
BYD3_k127_7964228_17	485918.Cpin_4984	5.396e-47	173.0	2APQJ@1|root,31EUD@2|Bacteria,4NNU5@976|Bacteroidetes,1ITJ4@117747|Sphingobacteriia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_7964228_12	1123278.KB893601_gene2737	8.314e-70	242.0	COG0705@1|root,COG0705@2|Bacteria,4NECA@976|Bacteroidetes,47N8U@768503|Cytophagia	976|Bacteroidetes	S	PFAM Rhomboid family	-	-	-	-	-	-	-	-	-	-	-	-	Rhomboid
BYD3_k127_7964228_15	1150600.ADIARSV_1192	1.468e-59	207.0	COG3832@1|root,COG3832@2|Bacteria,4PKNU@976|Bacteroidetes,1J0JB@117747|Sphingobacteriia	976|Bacteroidetes	S	PFAM Activator of Hsp90 ATPase 1 family protein	-	-	-	-	-	-	-	-	-	-	-	-	AHSA1
BYD3_k127_7964228_7	1121481.AUAS01000001_gene4743	2.438e-106	355.0	COG0300@1|root,COG0300@2|Bacteria,4NGDI@976|Bacteroidetes,47JNW@768503|Cytophagia	976|Bacteroidetes	S	Belongs to the short-chain dehydrogenases reductases (SDR) family	-	-	-	-	-	-	-	-	-	-	-	-	adh_short
BYD3_k127_7964228_3	1123248.KB893320_gene3912	2.11e-208	655.0	COG2942@1|root,COG2942@2|Bacteria,4NEH7@976|Bacteroidetes,1IVKJ@117747|Sphingobacteriia	976|Bacteroidetes	G	N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase)	-	-	5.1.3.11	ko:K16213	-	-	R01445,R10810	RC00289	ko00000,ko01000	-	-	-	GlcNAc_2-epim
BYD3_k127_7964228_20	236814.IX39_05150	5.073e-30	124.0	2E4AP@1|root,32Z6C@2|Bacteria,4NWDP@976|Bacteroidetes,1I55P@117743|Flavobacteriia,3ZRMH@59732|Chryseobacterium	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_7964228_21	1201293.AKXQ01000003_gene2551	6.987e-30	133.0	COG2220@1|root,COG2220@2|Bacteria	2|Bacteria	S	N-acetylphosphatidylethanolamine-hydrolysing phospholipas activity	-	-	-	-	-	-	-	-	-	-	-	-	Lactamase_B_3
BYD3_k127_7992022_0	1121904.ARBP01000003_gene6356	1.127e-239	789.0	COG0642@1|root,COG0745@1|root,COG3292@1|root,COG0745@2|Bacteria,COG2205@2|Bacteria,COG3292@2|Bacteria,4NDXU@976|Bacteroidetes,47JBS@768503|Cytophagia	976|Bacteroidetes	T	Two component regulator propeller	-	-	-	-	-	-	-	-	-	-	-	-	HATPase_c,HTH_18,HisKA,Reg_prop,Response_reg,Y_Y_Y
BYD3_k127_8017949_0	1120966.AUBU01000002_gene2217	2.746e-243	783.0	COG3291@1|root,COG3291@2|Bacteria,4NFCW@976|Bacteroidetes,47KMB@768503|Cytophagia	976|Bacteroidetes	M	C-terminal domain of CHU protein family	-	-	-	-	-	-	-	-	-	-	-	-	CHU_C
BYD3_k127_8017949_5	760192.Halhy_2383	6.069e-40	152.0	COG3011@1|root,COG3011@2|Bacteria,4NQ93@976|Bacteroidetes,1ITBQ@117747|Sphingobacteriia	976|Bacteroidetes	S	Protein of unknown function, DUF393	yuxK	-	-	-	-	-	-	-	-	-	-	-	DUF393
BYD3_k127_8017949_3	153721.MYP_1451	4.71e-139	447.0	COG0331@1|root,COG0331@2|Bacteria,4NE1D@976|Bacteroidetes,47JDE@768503|Cytophagia	976|Bacteroidetes	I	malonyl CoA-acyl carrier protein transacylase	fabD	-	2.3.1.39	ko:K00645	ko00061,ko00333,ko01100,ko01130,ko01212,map00061,map00333,map01100,map01130,map01212	M00082	R01626,R11671	RC00004,RC00039,RC02727	ko00000,ko00001,ko00002,ko01000,ko01004	-	-	-	Acyl_transf_1
BYD3_k127_8017949_4	468059.AUHA01000003_gene1429	5.777e-44	166.0	COG0801@1|root,COG0801@2|Bacteria,4NGE8@976|Bacteroidetes,1ISW1@117747|Sphingobacteriia	976|Bacteroidetes	H	7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK)	folK	-	2.7.6.3	ko:K00950	ko00790,ko01100,map00790,map01100	M00126,M00841	R03503	RC00002,RC00017	ko00000,ko00001,ko00002,ko01000	-	-	-	HPPK,dNK
BYD3_k127_8017949_1	1237149.C900_00949	1.328e-190	611.0	COG0616@1|root,COG0616@2|Bacteria,4NES1@976|Bacteroidetes,47KQH@768503|Cytophagia	976|Bacteroidetes	OU	signal peptide peptidase SppA, 36K type	sppA	-	-	ko:K04773	-	-	-	-	ko00000,ko01000,ko01002	-	-	-	Peptidase_S49
BYD3_k127_8017949_2	269798.CHU_2466	1.584e-175	556.0	COG0502@1|root,COG0502@2|Bacteria,4NEMA@976|Bacteroidetes,47K22@768503|Cytophagia	976|Bacteroidetes	H	Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism	bioB	-	2.8.1.6	ko:K01012	ko00780,ko01100,map00780,map01100	M00123,M00573,M00577	R01078	RC00441	ko00000,ko00001,ko00002,ko01000	-	-	-	BATS,Radical_SAM
BYD3_k127_807809_4	1121904.ARBP01000013_gene426	8.232e-10	61.0	COG0577@1|root,COG0577@2|Bacteria,4NDUK@976|Bacteroidetes,47NE2@768503|Cytophagia	976|Bacteroidetes	V	MacB-like periplasmic core domain	-	-	-	-	-	-	-	-	-	-	-	-	FtsX,MacB_PCD
BYD3_k127_807809_0	1121904.ARBP01000030_gene1964	5e-324	1013.0	COG0577@1|root,COG0577@2|Bacteria,4NDUK@976|Bacteroidetes,47MYR@768503|Cytophagia	976|Bacteroidetes	V	MacB-like periplasmic core domain	-	-	-	-	-	-	-	-	-	-	-	-	FtsX,MacB_PCD
BYD3_k127_807809_2	388413.ALPR1_11430	5.82e-43	159.0	COG1695@1|root,COG1695@2|Bacteria,4NTYF@976|Bacteroidetes,47R1G@768503|Cytophagia	976|Bacteroidetes	K	Transcriptional regulator PadR-like family	-	-	-	-	-	-	-	-	-	-	-	-	PadR
BYD3_k127_807809_1	1237149.C900_00060	1.662e-70	248.0	COG1295@1|root,COG1295@2|Bacteria,4NNQ6@976|Bacteroidetes,47Q87@768503|Cytophagia	976|Bacteroidetes	S	Virulence factor BrkB	-	-	-	ko:K07058	-	-	-	-	ko00000	-	-	-	Virul_fac_BrkB
BYD3_k127_8155928_18	1121904.ARBP01000004_gene1059	5.374e-34	143.0	COG0577@1|root,COG0577@2|Bacteria,4NDUK@976|Bacteroidetes,47NTJ@768503|Cytophagia	976|Bacteroidetes	V	MacB-like periplasmic core domain	-	-	-	ko:K02004	-	M00258	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	FtsX,MacB_PCD
BYD3_k127_8155928_24	1408473.JHXO01000009_gene3304	0.000959	47.0	COG0577@1|root,COG0577@2|Bacteria,4NFGD@976|Bacteroidetes,2FNP6@200643|Bacteroidia	976|Bacteroidetes	V	ABC transporter, permease protein	-	-	-	ko:K02004	-	M00258	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	FtsX,MacB_PCD
BYD3_k127_8155928_22	313606.M23134_04015	1.036e-07	60.0	COG0577@1|root,COG0577@2|Bacteria,4NDUK@976|Bacteroidetes,47JJN@768503|Cytophagia	976|Bacteroidetes	V	FtsX-like permease family	-	-	-	ko:K02004	-	M00258	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	FtsX,MacB_PCD
BYD3_k127_8155928_8	1123277.KB893174_gene5956	3.691e-139	463.0	2CD2X@1|root,2Z7RW@2|Bacteria,4NI6Q@976|Bacteroidetes,47M77@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_8155928_14	1185876.BN8_01297	8.063e-65	236.0	COG1835@1|root,COG1835@2|Bacteria,4NRUE@976|Bacteroidetes,47XI3@768503|Cytophagia	976|Bacteroidetes	I	Acyltransferase family	-	-	-	-	-	-	-	-	-	-	-	-	Acyl_transf_3
BYD3_k127_8155928_12	1123278.KB893544_gene4886	2.44e-78	269.0	COG1226@1|root,COG1226@2|Bacteria,4NYQD@976|Bacteroidetes,47WHC@768503|Cytophagia	976|Bacteroidetes	P	Ion transport protein	-	-	-	-	-	-	-	-	-	-	-	-	Ion_trans
BYD3_k127_8155928_15	153721.MYP_3136	2.645e-52	190.0	COG0664@1|root,COG0664@2|Bacteria,4NM4K@976|Bacteroidetes,47PUR@768503|Cytophagia	976|Bacteroidetes	K	Cyclic nucleotide-monophosphate binding domain	-	-	-	-	-	-	-	-	-	-	-	-	Crp,cNMP_binding
BYD3_k127_8155928_13	1347393.HG726023_gene3375	1.476e-65	231.0	COG0745@1|root,COG0745@2|Bacteria,4NF1I@976|Bacteroidetes,2FNZV@200643|Bacteroidia,4AKWQ@815|Bacteroidaceae	976|Bacteroidetes	K	COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain	rprY	-	-	-	-	-	-	-	-	-	-	-	Response_reg,Trans_reg_C
BYD3_k127_8155928_11	649349.Lbys_3178	1.458e-80	283.0	COG5002@1|root,COG5002@2|Bacteria,4PKBV@976|Bacteroidetes,47M71@768503|Cytophagia	976|Bacteroidetes	T	Signal transduction histidine kinase	rprX	-	2.7.13.3	ko:K07636	ko02020,map02020	M00434	-	-	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	-	-	-	HATPase_c,HisKA
BYD3_k127_8155928_5	643867.Ftrac_2129	5.762e-215	703.0	COG1807@1|root,COG1807@2|Bacteria,4PKJX@976|Bacteroidetes,47KCA@768503|Cytophagia	976|Bacteroidetes	M	Protein of unknown function (DUF2723)	-	-	-	-	-	-	-	-	-	-	-	-	DUF2723
BYD3_k127_8155928_10	1121904.ARBP01000015_gene179	1.18e-94	341.0	COG0577@1|root,COG0577@2|Bacteria,4NDUK@976|Bacteroidetes,47NTJ@768503|Cytophagia	976|Bacteroidetes	V	MacB-like periplasmic core domain	-	-	-	ko:K02004	-	M00258	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	FtsX,MacB_PCD
BYD3_k127_8155928_19	1191523.MROS_2390	8.238e-32	128.0	COG1993@1|root,COG1993@2|Bacteria	2|Bacteria	T	acr, cog1993	-	-	-	ko:K06199,ko:K09137	-	-	-	-	ko00000,ko02000	1.A.43.1,1.A.43.2,1.A.43.3	-	-	CBS,DUF190
BYD3_k127_8155928_17	1121957.ATVL01000011_gene3819	7.006e-39	148.0	COG0239@1|root,COG0239@2|Bacteria,4NV3N@976|Bacteroidetes,47RZJ@768503|Cytophagia	976|Bacteroidetes	D	Important for reducing fluoride concentration in the cell, thus reducing its toxicity	crcB	-	-	ko:K06199	-	-	-	-	ko00000,ko02000	1.A.43.1,1.A.43.2,1.A.43.3	-	-	CRCB
BYD3_k127_8155928_6	1086011.HJ01_01868	1.811e-163	522.0	COG0477@1|root,COG2814@2|Bacteria,4PMD0@976|Bacteroidetes,1IKGV@117743|Flavobacteriia,2NU3X@237|Flavobacterium	976|Bacteroidetes	EGP	Major Facilitator Superfamily	-	-	-	-	-	-	-	-	-	-	-	-	MFS_1
BYD3_k127_8155928_23	411463.EUBVEN_02713	2.489e-07	58.0	COG1846@1|root,COG1846@2|Bacteria,1V6GY@1239|Firmicutes,24HTB@186801|Clostridia,25WME@186806|Eubacteriaceae	186801|Clostridia	K	Transcriptional regulator, MarR family	-	-	-	-	-	-	-	-	-	-	-	-	HTH_27,MarR,MarR_2
BYD3_k127_8155928_1	1317122.ATO12_23905	0.0	1019.0	COG0577@1|root,COG0577@2|Bacteria,4NDUK@976|Bacteroidetes,1HX0V@117743|Flavobacteriia,2YHTU@290174|Aquimarina	976|Bacteroidetes	V	MacB-like periplasmic core domain	-	-	-	ko:K02004	-	M00258	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	FtsX,MacB_PCD
BYD3_k127_8155928_20	1166018.FAES_0173	3.885e-29	119.0	COG1695@1|root,COG1695@2|Bacteria,4P30F@976|Bacteroidetes,47QKX@768503|Cytophagia	976|Bacteroidetes	K	Transcriptional regulator PadR-like family	-	-	-	-	-	-	-	-	-	-	-	-	PadR
BYD3_k127_8155928_9	700598.Niako_0370	1.177e-107	361.0	COG0457@1|root,COG0457@2|Bacteria,4NEYK@976|Bacteroidetes,1IVUJ@117747|Sphingobacteriia	976|Bacteroidetes	S	Protein of unknown function (DUF2911)	-	-	-	-	-	-	-	-	-	-	-	-	DUF2911
BYD3_k127_8155928_16	1185876.BN8_01425	1.722e-43	161.0	COG1695@1|root,COG1695@2|Bacteria,4NRHC@976|Bacteroidetes,47QG7@768503|Cytophagia	976|Bacteroidetes	K	Transcriptional regulator PadR-like family	-	-	-	-	-	-	-	-	-	-	-	-	PadR
BYD3_k127_8155928_3	743722.Sph21_4981	4.594e-277	877.0	COG0577@1|root,COG0577@2|Bacteria,4NDUK@976|Bacteroidetes,1IQFY@117747|Sphingobacteriia	976|Bacteroidetes	V	MacB-like periplasmic core domain	-	-	-	-	-	-	-	-	-	-	-	-	FtsX,MacB_PCD
BYD3_k127_8155928_4	1185876.BN8_00878	5.036e-232	746.0	COG0577@1|root,COG0577@2|Bacteria,4NDUK@976|Bacteroidetes,47JJN@768503|Cytophagia	976|Bacteroidetes	V	FtsX-like permease family	-	-	-	-	-	-	-	-	-	-	-	-	FtsX,MacB_PCD
BYD3_k127_8155928_2	1121904.ARBP01000004_gene1108	1.311e-290	912.0	COG0577@1|root,COG0577@2|Bacteria,4NDUK@976|Bacteroidetes,47JJN@768503|Cytophagia	976|Bacteroidetes	V	FtsX-like permease family	-	-	-	-	-	-	-	-	-	-	-	-	FtsX,MacB_PCD
BYD3_k127_8155928_7	504472.Slin_3688	9.391e-161	525.0	COG1680@1|root,COG1680@2|Bacteria,4NEEP@976|Bacteroidetes,47KW2@768503|Cytophagia	976|Bacteroidetes	V	Beta-lactamase	-	-	-	-	-	-	-	-	-	-	-	-	Beta-lactamase
BYD3_k127_8155928_21	1123277.KB893174_gene5902	8.37e-20	93.0	COG1695@1|root,COG1695@2|Bacteria,4P3EW@976|Bacteroidetes,47V29@768503|Cytophagia	976|Bacteroidetes	K	PFAM transcriptional regulator PadR family protein	-	-	-	-	-	-	-	-	-	-	-	-	PadR
BYD3_k127_8155928_0	761193.Runsl_3095	0.0	1084.0	COG0577@1|root,COG0577@2|Bacteria,4NDW7@976|Bacteroidetes,47N35@768503|Cytophagia	976|Bacteroidetes	V	FtsX-like permease family	-	-	-	-	-	-	-	-	-	-	-	-	FtsX,MacB_PCD
BYD3_k127_8182620_104	471854.Dfer_5758	5.126e-10	59.0	COG1760@1|root,COG1760@2|Bacteria,4NENR@976|Bacteroidetes,47JRY@768503|Cytophagia	976|Bacteroidetes	E	PFAM Serine dehydratase alpha chain	sdaA	-	4.3.1.17	ko:K01752	ko00260,ko00270,ko01100,ko01110,ko01130,ko01200,ko01230,map00260,map00270,map01100,map01110,map01130,map01200,map01230	-	R00220,R00590	RC00331,RC02600	ko00000,ko00001,ko01000	-	-	-	SDH_alpha,SDH_beta
BYD3_k127_8182620_71	1185876.BN8_03564	8.401e-70	250.0	COG1312@1|root,COG1312@2|Bacteria,4NIMS@976|Bacteroidetes,47JVK@768503|Cytophagia	976|Bacteroidetes	G	D-mannonate dehydratase (UxuA)	-	-	4.2.1.8	ko:K01686	ko00040,ko01100,map00040,map01100	M00061	R05606	RC00543	ko00000,ko00001,ko00002,ko01000	-	-	-	UxuA
BYD3_k127_8182620_46	485917.Phep_0335	2.03e-112	374.0	COG4454@1|root,COG4454@2|Bacteria,4PN5Y@976|Bacteroidetes,1IVEJ@117747|Sphingobacteriia	976|Bacteroidetes	P	PFAM Copper binding proteins, plastocyanin azurin family	-	-	-	-	-	-	-	-	-	-	-	-	Copper-bind
BYD3_k127_8182620_11	485917.Phep_0336	1.534e-185	592.0	COG2133@1|root,COG2133@2|Bacteria,4NI97@976|Bacteroidetes,1IWTQ@117747|Sphingobacteriia	976|Bacteroidetes	G	pyrroloquinoline quinone binding	-	-	-	-	-	-	-	-	-	-	-	-	GSDH
BYD3_k127_8182620_53	761193.Runsl_5616	3.315e-97	324.0	28J3W@1|root,2Z900@2|Bacteria,4NG4R@976|Bacteroidetes,47NT0@768503|Cytophagia	976|Bacteroidetes	S	pfam nipsnap	-	-	-	-	-	-	-	-	-	-	-	-	NIPSNAP
BYD3_k127_8182620_77	509635.N824_26605	1.187e-60	218.0	COG3823@1|root,COG3823@2|Bacteria,4P2CR@976|Bacteroidetes,1IXIA@117747|Sphingobacteriia	976|Bacteroidetes	O	Glutamine cyclotransferase	-	-	-	-	-	-	-	-	-	-	-	-	Glu_cyclase_2
BYD3_k127_8182620_75	929713.NIASO_07690	2.842e-63	226.0	COG3823@1|root,COG3823@2|Bacteria,4NF2M@976|Bacteroidetes,1IPTM@117747|Sphingobacteriia	976|Bacteroidetes	O	Glutamine cyclotransferase	-	-	2.3.2.5	ko:K00683	-	-	-	-	ko00000,ko01000	-	-	-	Glu_cyclase_2
BYD3_k127_8182620_94	1304885.AUEY01000017_gene3764	2.81e-32	133.0	COG0586@1|root,COG0586@2|Bacteria,1R5SJ@1224|Proteobacteria,43AE6@68525|delta/epsilon subdivisions,2X6A8@28221|Deltaproteobacteria,2MPXN@213118|Desulfobacterales	28221|Deltaproteobacteria	S	SNARE associated Golgi protein	-	-	-	-	-	-	-	-	-	-	-	-	SNARE_assoc
BYD3_k127_8182620_38	1121904.ARBP01000002_gene7256	4.458e-129	419.0	COG3608@1|root,COG3608@2|Bacteria,4NE8S@976|Bacteroidetes,47KAM@768503|Cytophagia	976|Bacteroidetes	S	PFAM Succinylglutamate desuccinylase Aspartoacylase family	-	-	-	ko:K06987	-	-	-	-	ko00000	-	-	-	AstE_AspA
BYD3_k127_8182620_34	1124780.ANNU01000073_gene711	5.314e-132	426.0	COG0189@1|root,COG0189@2|Bacteria,4NED4@976|Bacteroidetes,47KJX@768503|Cytophagia	976|Bacteroidetes	HJ	Belongs to the RimK family	rimK	-	-	ko:K05844	-	-	-	-	ko00000,ko01000,ko03009	-	-	-	RimK
BYD3_k127_8182620_89	1237149.C900_04900	1.846e-38	148.0	COG4067@1|root,COG4067@2|Bacteria,4NS86@976|Bacteroidetes,47RH0@768503|Cytophagia	976|Bacteroidetes	O	Putative ATP-dependant zinc protease	-	-	-	-	-	-	-	-	-	-	-	-	Zn_protease
BYD3_k127_8182620_85	1237149.C900_04901	8.329e-48	176.0	COG0457@1|root,COG0457@2|Bacteria,4NQR8@976|Bacteroidetes,47YIZ@768503|Cytophagia	976|Bacteroidetes	S	Protein of unknown function (DUF2911)	-	-	-	-	-	-	-	-	-	-	-	-	DUF2911
BYD3_k127_8182620_8	1237149.C900_04390	5.08e-234	729.0	COG0541@1|root,COG0541@2|Bacteria,4NDZ2@976|Bacteroidetes,47MYD@768503|Cytophagia	976|Bacteroidetes	U	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY	ffh	-	3.6.5.4	ko:K03106	ko02024,ko03060,ko03070,map02024,map03060,map03070	M00335	-	-	ko00000,ko00001,ko00002,ko01000,ko02044	3.A.5.1,3.A.5.2,3.A.5.7,3.A.5.8,3.A.5.9	-	-	SRP54,SRP54_N,SRP_SPB
BYD3_k127_8182620_51	471854.Dfer_5030	4.985e-102	344.0	COG1929@1|root,COG1929@2|Bacteria,4NFK8@976|Bacteroidetes,47MW7@768503|Cytophagia	976|Bacteroidetes	G	Belongs to the glycerate kinase type-1 family	glxK	-	2.7.1.165	ko:K00865	ko00260,ko00561,ko00630,ko01100,ko01120,ko01130,map00260,map00561,map00630,map01100,map01120,map01130	-	R08572	RC00002,RC00428	ko00000,ko00001,ko01000	-	-	-	Gly_kinase
BYD3_k127_8182620_45	1121904.ARBP01000001_gene5517	1.364e-116	387.0	COG0303@1|root,COG0303@2|Bacteria,4NDYD@976|Bacteroidetes,47M8R@768503|Cytophagia	976|Bacteroidetes	H	Molybdenum cofactor synthesis domain protein	moeA	-	2.10.1.1	ko:K03750	ko00790,ko01100,map00790,map01100	-	R09735	RC03462	ko00000,ko00001,ko01000	-	-	-	MoCF_biosynth,MoeA_C,MoeA_N
BYD3_k127_8182620_80	1237149.C900_04392	3.275e-54	196.0	COG0315@1|root,COG0315@2|Bacteria,4NHA0@976|Bacteroidetes,47PU9@768503|Cytophagia	976|Bacteroidetes	H	MoaC family	moaC	-	4.6.1.17	ko:K03637	ko00790,ko01100,ko04122,map00790,map01100,map04122	-	R11372	RC03425	ko00000,ko00001,ko01000	-	-	-	MoaC
BYD3_k127_8182620_63	1123277.KB893196_gene4991	5.905e-76	263.0	COG0664@1|root,COG0664@2|Bacteria,4PM2A@976|Bacteroidetes,47KHT@768503|Cytophagia	976|Bacteroidetes	T	Ion transport protein	-	-	-	ko:K10716	-	-	-	-	ko00000,ko02000	1.A.1.1,1.A.1.13,1.A.1.17,1.A.1.24,1.A.1.25,1.A.1.6	-	-	Ion_trans
BYD3_k127_8182620_86	1123278.KB893387_gene4424	9.594e-46	171.0	COG0746@1|root,COG0746@2|Bacteria,4NMYW@976|Bacteroidetes,47NQP@768503|Cytophagia	976|Bacteroidetes	H	Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo- MPT) cofactor (Moco or molybdenum cofactor) to form Mo- molybdopterin guanine dinucleotide (Mo-MGD) cofactor	mobA	-	2.7.7.77	ko:K03752	ko00790,ko01100,map00790,map01100	-	R11581	-	ko00000,ko00001,ko01000	-	-	-	NTP_transf_3
BYD3_k127_8182620_98	177437.HRM2_27280	1.472e-18	100.0	COG2304@1|root,COG2885@1|root,COG2304@2|Bacteria,COG2885@2|Bacteria,1R7WJ@1224|Proteobacteria,42QJK@68525|delta/epsilon subdivisions,2WJX0@28221|Deltaproteobacteria,2MIS0@213118|Desulfobacterales	28221|Deltaproteobacteria	M	Belongs to the ompA family	-	-	-	ko:K03286	-	-	-	-	ko00000,ko02000	1.B.6	-	-	OmpA,TSP_3,VWA,VWA_2
BYD3_k127_8182620_93	643867.Ftrac_2997	1.044e-33	151.0	COG3291@1|root,COG4733@1|root,COG3291@2|Bacteria,COG4733@2|Bacteria,4NRDH@976|Bacteroidetes	976|Bacteroidetes	M	amine dehydrogenase activity	-	-	-	-	-	-	-	-	-	-	-	-	CHU_C,PKD
BYD3_k127_8182620_101	1086011.HJ01_03146	2.198e-14	87.0	COG3291@1|root,COG4733@1|root,COG3291@2|Bacteria,COG4733@2|Bacteria,4NDZQ@976|Bacteroidetes,1HX5A@117743|Flavobacteriia,2NSSE@237|Flavobacterium	976|Bacteroidetes	O	gliding motility-associated C-terminal domain	-	-	-	-	-	-	-	-	-	-	-	-	CHU_C,HYR,SBBP,SprB
BYD3_k127_8182620_103	1089547.KB913013_gene2920	5.21e-13	79.0	COG0810@1|root,COG0810@2|Bacteria,4NFH6@976|Bacteroidetes,47XHA@768503|Cytophagia	976|Bacteroidetes	M	Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins	-	-	-	ko:K03832	-	-	-	-	ko00000,ko02000	2.C.1.1	-	-	TonB_C
BYD3_k127_8182620_83	984262.SGRA_1732	8.009e-49	180.0	COG1595@1|root,COG1595@2|Bacteria,4NR8J@976|Bacteroidetes	976|Bacteroidetes	K	COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog	-	-	-	ko:K03088	-	-	-	-	ko00000,ko03021	-	-	-	Sigma70_r2,Sigma70_r4,Sigma70_r4_2
BYD3_k127_8182620_87	1121904.ARBP01000005_gene4463	1.992e-45	168.0	COG0314@1|root,COG0314@2|Bacteria,4NP1X@976|Bacteroidetes,47QJT@768503|Cytophagia	976|Bacteroidetes	H	Molybdopterin converting factor, large subunit	moaE	-	2.8.1.12	ko:K03635	ko00790,ko01100,ko04122,map00790,map01100,map04122	-	R09395	RC02507	ko00000,ko00001,ko01000	-	-	-	MoaE
BYD3_k127_8182620_99	929556.Solca_1995	2.959e-17	84.0	COG1977@1|root,COG1977@2|Bacteria,4NUVK@976|Bacteroidetes,1IZEY@117747|Sphingobacteriia	976|Bacteroidetes	H	Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin	moaD	-	-	ko:K03636	ko04122,map04122	-	-	-	ko00000,ko00001	-	-	-	ThiS
BYD3_k127_8182620_29	1123277.KB893228_gene2151	3.912e-145	466.0	COG2896@1|root,COG2896@2|Bacteria,4NFS9@976|Bacteroidetes,47K8J@768503|Cytophagia	976|Bacteroidetes	H	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate	moaA	-	4.1.99.22	ko:K03639	ko00790,ko01100,ko04122,map00790,map01100,map04122	-	R09394	RC03420	ko00000,ko00001,ko01000	-	-	-	Fer4_12,Fer4_14,Mob_synth_C,Radical_SAM
BYD3_k127_8182620_4	1237149.C900_04398	1.543e-295	928.0	COG4485@1|root,COG4485@2|Bacteria,4NEE5@976|Bacteroidetes,47ME6@768503|Cytophagia	976|Bacteroidetes	S	PFAM Bacterial membrane protein YfhO	-	-	-	-	-	-	-	-	-	-	-	-	YfhO
BYD3_k127_8182620_44	929562.Emtol_3340	6.497e-120	392.0	COG3386@1|root,COG3386@2|Bacteria,4NF4A@976|Bacteroidetes,47JC9@768503|Cytophagia	976|Bacteroidetes	G	PFAM SMP-30 Gluconolaconase	-	-	3.1.1.17	ko:K01053	ko00030,ko00053,ko00930,ko01100,ko01110,ko01120,ko01130,ko01200,ko01220,map00030,map00053,map00930,map01100,map01110,map01120,map01130,map01200,map01220	M00129	R01519,R02933,R03751	RC00537,RC00983	ko00000,ko00001,ko00002,ko01000,ko04147	-	-	-	Pectate_lyase_3,SGL
BYD3_k127_8182620_97	1341155.FSS13T_07660	1.363e-27	130.0	COG0705@1|root,COG0705@2|Bacteria,4NP9G@976|Bacteroidetes,1IDFI@117743|Flavobacteriia,2NY9B@237|Flavobacterium	976|Bacteroidetes	S	Rhomboid family	-	-	3.4.21.105	ko:K19225	-	-	-	-	ko00000,ko01000,ko01002	-	-	-	Rhomboid
BYD3_k127_8182620_40	1237149.C900_03771	4.715e-128	418.0	COG1932@1|root,COG1932@2|Bacteria,4PM2C@976|Bacteroidetes,47Y07@768503|Cytophagia	976|Bacteroidetes	EH	Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine	-	-	2.6.1.52	ko:K00831	ko00260,ko00680,ko00750,ko01100,ko01120,ko01130,ko01200,ko01230,map00260,map00680,map00750,map01100,map01120,map01130,map01200,map01230	M00020,M00124	R04173,R05085	RC00006,RC00036	ko00000,ko00001,ko00002,ko01000,ko01007	-	-	-	Aminotran_5
BYD3_k127_8182620_9	1239962.C943_02090	6.222e-194	629.0	COG0659@1|root,COG0659@2|Bacteria,4NE9G@976|Bacteroidetes,47KTW@768503|Cytophagia	976|Bacteroidetes	P	Sulfate permease family	-	-	-	-	-	-	-	-	-	-	-	-	Sulfate_transp
BYD3_k127_8182620_18	1434325.AZQN01000008_gene3030	6.364e-165	530.0	2BVKK@1|root,2Z8PC@2|Bacteria,4NF9X@976|Bacteroidetes,47KVJ@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	Porin_O_P
BYD3_k127_8182620_109	1046627.BZARG_1026	0.0004688	46.0	2EEIB@1|root,338C7@2|Bacteria,4NVC8@976|Bacteroidetes,1I54E@117743|Flavobacteriia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_8182620_108	1349785.BAUG01000013_gene1077	0.0002152	45.0	COG2369@1|root,COG4383@1|root,COG2369@2|Bacteria,COG4383@2|Bacteria,4PACZ@976|Bacteroidetes,1I0FK@117743|Flavobacteriia	976|Bacteroidetes	S	Protein of unknown function (DUF935)	-	-	-	-	-	-	-	-	-	-	-	-	DUF935
BYD3_k127_8182620_70	1124780.ANNU01000049_gene2195	3.637e-70	242.0	COG2095@1|root,COG2095@2|Bacteria,4NG94@976|Bacteroidetes,47PA2@768503|Cytophagia	976|Bacteroidetes	U	PFAM MarC family integral membrane protein	marC	-	-	ko:K05595	-	-	-	-	ko00000,ko02000	2.A.95.1	-	-	MarC
BYD3_k127_8182620_67	926556.Echvi_1813	8.33e-73	249.0	COG0328@1|root,COG0328@2|Bacteria,4NNQX@976|Bacteroidetes,47PXE@768503|Cytophagia	976|Bacteroidetes	L	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids	rnhA	-	3.1.26.4	ko:K03469	ko03030,map03030	-	-	-	ko00000,ko00001,ko01000,ko03032	-	-	-	RNase_H
BYD3_k127_8182620_19	1237149.C900_03765	1.242e-162	523.0	COG1748@1|root,COG1748@2|Bacteria,4NFM8@976|Bacteroidetes,47MT4@768503|Cytophagia	976|Bacteroidetes	E	Saccharopine dehydrogenase	-	-	1.5.1.10,1.5.1.7	ko:K00290,ko:K00293	ko00300,ko00310,ko01100,ko01110,ko01130,ko01230,map00300,map00310,map01100,map01110,map01130,map01230	M00030,M00032	R00715,R02315	RC00215,RC00217,RC00225,RC01532	ko00000,ko00001,ko00002,ko01000	-	-	-	Sacchrp_dh_C,Sacchrp_dh_NADP
BYD3_k127_8182620_88	1124780.ANNU01000049_gene2200	1.29e-39	153.0	COG0295@1|root,COG0295@2|Bacteria,4NQED@976|Bacteroidetes,47QAQ@768503|Cytophagia	976|Bacteroidetes	F	cytidine and deoxycytidylate deaminase	cdd	-	3.5.4.5	ko:K01489	ko00240,ko00983,ko01100,map00240,map00983,map01100	-	R01878,R02485,R08221	RC00074,RC00514	ko00000,ko00001,ko01000	-	-	-	dCMP_cyt_deam_1
BYD3_k127_8182620_36	1237149.C900_03762	7.63e-132	424.0	COG1352@1|root,COG1352@2|Bacteria,4NFDS@976|Bacteroidetes,47JV5@768503|Cytophagia	976|Bacteroidetes	NT	PFAM MCP methyltransferase CheR-type	-	-	2.1.1.80	ko:K00575	ko02020,ko02030,map02020,map02030	-	-	-	ko00000,ko00001,ko01000,ko02035	-	-	-	CheR,CheR_N
BYD3_k127_8182620_56	1124780.ANNU01000049_gene2202	1.164e-92	307.0	COG2201@1|root,COG2201@2|Bacteria,4NNR3@976|Bacteroidetes,47PAB@768503|Cytophagia	976|Bacteroidetes	NT	CheB methylesterase	-	-	3.1.1.61,3.5.1.44	ko:K03412	ko02020,ko02030,map02020,map02030	M00506	-	-	ko00000,ko00001,ko00002,ko01000,ko02022,ko02035	-	-	-	CheB_methylest
BYD3_k127_8182620_90	1237149.C900_03760	3.577e-36	147.0	COG3605@1|root,COG3605@2|Bacteria,4P41N@976|Bacteroidetes,47VIK@768503|Cytophagia	976|Bacteroidetes	T	GAF domain	-	-	-	-	-	-	-	-	-	-	-	-	GAF_2
BYD3_k127_8182620_3	1237149.C900_03759	0.0	1357.0	COG2202@1|root,COG2203@1|root,COG2208@1|root,COG2202@2|Bacteria,COG2203@2|Bacteria,COG2208@2|Bacteria,4NIXZ@976|Bacteroidetes,47MCW@768503|Cytophagia	976|Bacteroidetes	T	Sigma factor PP2C-like phosphatases	-	-	-	-	-	-	-	-	-	-	-	-	GAF_2,HAMP,PAS,PAS_4,PAS_9,SpoIIE
BYD3_k127_8182620_68	1237149.C900_03758	3.216e-72	248.0	2AAU0@1|root,3106Q@2|Bacteria,4NNSV@976|Bacteroidetes,47Q0I@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_8182620_74	1237149.C900_03757	6.269e-64	220.0	2CEYK@1|root,31W5M@2|Bacteria,4NQEQ@976|Bacteroidetes,47R7M@768503|Cytophagia	976|Bacteroidetes	S	Domain of unknown function (DUF1987)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1987
BYD3_k127_8182620_2	1237149.C900_03756	0.0	1411.0	COG0842@1|root,COG1131@1|root,COG0842@2|Bacteria,COG1131@2|Bacteria,4NHPD@976|Bacteroidetes,47KQD@768503|Cytophagia	976|Bacteroidetes	V	ABC-2 type transporter	-	-	-	ko:K21397	-	-	-	-	ko00000,ko02000	3.A.1	-	-	ABC2_membrane,ABC_tran,TerB
BYD3_k127_8182620_37	1237149.C900_03755	1.47e-129	419.0	29N3N@1|root,3091D@2|Bacteria,4NNZB@976|Bacteroidetes,47PVZ@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_8182620_78	1237149.C900_03754	8.724e-58	203.0	2EFJ6@1|root,339BJ@2|Bacteria,4NUYU@976|Bacteroidetes,47VMH@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_8182620_48	1237149.C900_03752	2.161e-108	355.0	COG4221@1|root,COG4221@2|Bacteria,4NE1R@976|Bacteroidetes,47MMM@768503|Cytophagia	976|Bacteroidetes	S	Belongs to the short-chain dehydrogenases reductases (SDR) family	ydfG	-	-	-	-	-	-	-	-	-	-	-	adh_short
BYD3_k127_8182620_59	1237149.C900_03751	7.695e-82	278.0	2C52N@1|root,2Z7U1@2|Bacteria,4NEZW@976|Bacteroidetes,47PC8@768503|Cytophagia	976|Bacteroidetes	S	Outer membrane protein beta-barrel domain	porT	-	-	-	-	-	-	-	-	-	-	-	OMP_b-brl_2
BYD3_k127_8182620_50	1237149.C900_03750	1.096e-102	339.0	COG0500@1|root,COG2226@2|Bacteria,4NEDR@976|Bacteroidetes,47JXK@768503|Cytophagia	976|Bacteroidetes	H	Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2)	menG	-	2.1.1.163,2.1.1.201	ko:K03183	ko00130,ko01100,ko01110,map00130,map01100,map01110	M00116,M00117	R04990,R04993,R06859,R08774,R09736	RC00003,RC01253,RC01662	ko00000,ko00001,ko00002,ko01000	-	-	-	Ubie_methyltran
BYD3_k127_8182620_5	1237149.C900_03749	9.871e-243	768.0	COG0823@1|root,COG2885@1|root,COG0823@2|Bacteria,COG2885@2|Bacteria,4NHCE@976|Bacteroidetes,47NZ4@768503|Cytophagia	976|Bacteroidetes	MU	OmpA family	-	-	-	-	-	-	-	-	-	-	-	-	OmpA,PD40
BYD3_k127_8182620_69	709991.Odosp_1339	1.471e-70	243.0	COG0218@1|root,COG0218@2|Bacteria,4NEA9@976|Bacteroidetes,2FM4M@200643|Bacteroidia,22X2K@171551|Porphyromonadaceae	976|Bacteroidetes	D	Necessary for normal cell division and for the maintenance of normal septation	engB	GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464	-	ko:K03978	-	-	-	-	ko00000,ko03036	-	-	-	MMR_HSR1
BYD3_k127_8182620_84	1124780.ANNU01000049_gene2219	6.231e-48	175.0	2DEYG@1|root,2ZPSM@2|Bacteria,4NNJW@976|Bacteroidetes,47PWR@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_8182620_23	1237149.C900_03745	6.034e-154	493.0	COG0158@1|root,COG0158@2|Bacteria,4NG06@976|Bacteroidetes,47KNQ@768503|Cytophagia	976|Bacteroidetes	G	D-fructose-1,6-bisphosphate 1-phosphohydrolase class 1	fbp	-	3.1.3.11	ko:K03841	ko00010,ko00030,ko00051,ko00680,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko04152,ko04910,map00010,map00030,map00051,map00680,map00710,map01100,map01110,map01120,map01130,map01200,map04152,map04910	M00003,M00165,M00167,M00344	R00762,R04780	RC00017	ko00000,ko00001,ko00002,ko01000,ko04147	-	-	-	FBPase
BYD3_k127_8182620_30	1237149.C900_03744	6.733e-136	444.0	COG0527@1|root,COG0527@2|Bacteria,4NF0M@976|Bacteroidetes,47JAD@768503|Cytophagia	976|Bacteroidetes	E	Belongs to the aspartokinase family	lysC	-	2.7.2.4	ko:K00928	ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01210,map01230	M00016,M00017,M00018,M00033,M00525,M00526,M00527	R00480	RC00002,RC00043	ko00000,ko00001,ko00002,ko01000	-	-	-	AA_kinase
BYD3_k127_8182620_24	1121904.ARBP01000009_gene4294	1.259e-153	499.0	COG0155@1|root,COG1773@1|root,COG0155@2|Bacteria,COG1773@2|Bacteria,4NHF0@976|Bacteroidetes,47M86@768503|Cytophagia	976|Bacteroidetes	C	Rubredoxin	rubR	-	-	-	-	-	-	-	-	-	-	-	Rubredoxin
BYD3_k127_8182620_0	1121904.ARBP01000009_gene4295	0.0	1600.0	COG0243@1|root,COG1251@1|root,COG0243@2|Bacteria,COG1251@2|Bacteria,4NG4N@976|Bacteroidetes,47JUR@768503|Cytophagia	976|Bacteroidetes	C	Belongs to the prokaryotic molybdopterin-containing oxidoreductase family	-	-	1.7.7.2	ko:K00367	ko00910,ko01120,map00910,map01120	M00531	R00791	RC02812	ko00000,ko00001,ko00002,ko01000	-	-	-	Fer2_BFD,Molybdop_Fe4S4,Molybdopterin,Molydop_binding,Pyr_redox_2
BYD3_k127_8182620_33	1121904.ARBP01000009_gene4191	1.909e-133	430.0	COG1116@1|root,COG1116@2|Bacteria,4NE9U@976|Bacteroidetes,47TV3@768503|Cytophagia	976|Bacteroidetes	P	ATPases associated with a variety of cellular activities	-	-	-	ko:K02049,ko:K15579	ko00910,ko02010,map00910,map02010	M00188,M00438	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.16,3.A.1.16.1,3.A.1.16.2,3.A.1.17	-	-	ABC_tran
BYD3_k127_8182620_35	1121904.ARBP01000009_gene4190	6.674e-132	426.0	COG1116@1|root,COG1116@2|Bacteria,4PKJ3@976|Bacteroidetes,47XCV@768503|Cytophagia	976|Bacteroidetes	P	ATPases associated with a variety of cellular activities	-	-	-	ko:K15578	ko00910,ko02010,map00910,map02010	M00438	-	-	ko00000,ko00001,ko00002,ko01000,ko02000	3.A.1.16.1	-	-	ABC_tran
BYD3_k127_8182620_21	1121904.ARBP01000009_gene4189	4.444e-159	507.0	COG0600@1|root,COG0600@2|Bacteria,4NE2A@976|Bacteroidetes,47MTR@768503|Cytophagia	976|Bacteroidetes	P	Binding-protein-dependent transport system inner membrane component	-	-	-	ko:K15577	ko00910,ko02010,map00910,map02010	M00438	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.16.1,3.A.1.16.2	-	-	BPD_transp_1
BYD3_k127_8182620_6	1121904.ARBP01000009_gene4188	4.781e-237	740.0	COG0715@1|root,COG0715@2|Bacteria,4NGQ6@976|Bacteroidetes,47KV3@768503|Cytophagia	976|Bacteroidetes	P	NMT1-like family	-	-	-	ko:K15576	ko00910,ko02010,map00910,map02010	M00438	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.16.1,3.A.1.16.2	-	-	NMT1_2
BYD3_k127_8182620_31	1121904.ARBP01000009_gene4187	4.159e-135	445.0	COG3203@1|root,COG3203@2|Bacteria,4NDYW@976|Bacteroidetes,47JMP@768503|Cytophagia	976|Bacteroidetes	M	Alginate export	-	-	-	-	-	-	-	-	-	-	-	-	Alginate_exp
BYD3_k127_8182620_15	926549.KI421517_gene1975	3.445e-175	559.0	COG2223@1|root,COG2223@2|Bacteria,4NETE@976|Bacteroidetes,47MEV@768503|Cytophagia	976|Bacteroidetes	P	Major Facilitator Superfamily	-	-	-	ko:K02575	ko00910,map00910	M00615	-	-	ko00000,ko00001,ko00002,ko02000	2.A.1.8	-	-	MFS_1
BYD3_k127_8182620_64	485918.Cpin_6851	1.874e-74	260.0	COG0716@1|root,COG0716@2|Bacteria,4NHTB@976|Bacteroidetes,1ISM3@117747|Sphingobacteriia	976|Bacteroidetes	C	Dialkylrecorsinol condensing enzyme DarA	darA	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_8182620_32	485918.Cpin_6850	5.805e-134	436.0	COG0332@1|root,COG0332@2|Bacteria,4NE5Q@976|Bacteroidetes,1IPV9@117747|Sphingobacteriia	976|Bacteroidetes	I	PFAM 3-Oxoacyl- acyl-carrier-protein (ACP) synthase III	darB	-	2.3.1.180	ko:K00648	ko00061,ko01100,ko01212,map00061,map01100,map01212	M00082,M00083	R10707	RC00004,RC02729,RC02888	ko00000,ko00001,ko00002,ko01000,ko01004	-	-	-	ACP_syn_III_C,Thiolase_N,ketoacyl-synt
BYD3_k127_8182620_92	485918.Cpin_6849	7.155e-34	134.0	2CE7N@1|root,30Q80@2|Bacteria,4NNKP@976|Bacteroidetes,1IT9G@117747|Sphingobacteriia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_8182620_42	485918.Cpin_6848	2.69e-126	412.0	COG4990@1|root,COG4990@2|Bacteria,4NFZX@976|Bacteroidetes,1IPPX@117747|Sphingobacteriia	976|Bacteroidetes	S	Domain of unknown function (DUF4872)	-	-	-	-	-	-	-	-	-	-	-	-	BtrH_N,DUF4872
BYD3_k127_8182620_62	376686.Fjoh_1096	4.396e-77	265.0	COG1131@1|root,COG1131@2|Bacteria,4NFW9@976|Bacteroidetes,1HZ6V@117743|Flavobacteriia,2NU6F@237|Flavobacterium	976|Bacteroidetes	V	Multidrug ABC transporter ATPase	-	-	-	ko:K01990	-	M00254	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	ABC_tran
BYD3_k127_8182620_55	485918.Cpin_6846	1.525e-95	327.0	COG0842@1|root,COG0842@2|Bacteria,4NGFA@976|Bacteroidetes,1ISKA@117747|Sphingobacteriia	976|Bacteroidetes	V	ABC-2 type transporter	-	-	-	ko:K01992	-	M00254	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	ABC2_membrane_3
BYD3_k127_8182620_95	575590.HMPREF0156_01329	1.36e-28	117.0	COG0236@1|root,COG0236@2|Bacteria,4NSFU@976|Bacteroidetes	976|Bacteroidetes	IQ	acyl carrier protein	acpP2	-	-	ko:K02078	-	-	-	-	ko00000,ko00001	-	-	-	PP-binding
BYD3_k127_8182620_39	153721.MYP_4265	4.448e-128	422.0	COG0304@1|root,COG0304@2|Bacteria,4NFC8@976|Bacteroidetes,47N4W@768503|Cytophagia	976|Bacteroidetes	IQ	Beta-ketoacyl synthase, C-terminal domain	-	-	2.3.1.41	ko:K00647	ko00061,ko00780,ko01100,ko01212,map00061,map00780,map01100,map01212	M00083,M00572	R04355,R04726,R04952,R04957,R04960,R04963,R04968,R07762,R10115,R10119	RC00039,RC02728,RC02729,RC02888	ko00000,ko00001,ko00002,ko01000,ko01004	-	-	-	Ketoacyl-synt_C,ketoacyl-synt
BYD3_k127_8182620_61	616991.JPOO01000001_gene3733	1.406e-77	272.0	COG0304@1|root,COG0304@2|Bacteria,4NEU6@976|Bacteroidetes,1HXNF@117743|Flavobacteriia	976|Bacteroidetes	IQ	synthase	-	-	-	-	-	-	-	-	-	-	-	-	Ketoacyl-synt_2,ketoacyl-synt
BYD3_k127_8182620_58	1123037.AUDE01000024_gene1660	6.409e-87	306.0	COG1470@1|root,COG1470@2|Bacteria	2|Bacteria	S	cell adhesion involved in biofilm formation	-	-	-	-	-	-	-	-	-	-	-	-	CarbopepD_reg_2
BYD3_k127_8182620_1	1237149.C900_04538	0.0	1487.0	28I1Q@1|root,2Z869@2|Bacteria,4NH2E@976|Bacteroidetes,47M2D@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_8182620_22	485918.Cpin_2165	1.456e-155	505.0	COG4251@1|root,COG5278@1|root,COG4251@2|Bacteria,COG5278@2|Bacteria,4NIJY@976|Bacteroidetes	976|Bacteroidetes	T	His Kinase A (phosphoacceptor) domain	-	-	-	-	-	-	-	-	-	-	-	-	CHASE3,HAMP,HATPase_c,HisKA
BYD3_k127_8182620_79	1123248.KB893337_gene2358	7.598e-55	195.0	COG3437@1|root,COG3437@2|Bacteria,4PN7C@976|Bacteroidetes	976|Bacteroidetes	T	cheY-homologous receiver domain	-	-	-	-	-	-	-	-	-	-	-	-	Response_reg
BYD3_k127_8182620_65	1034807.FBFL15_0841	9.707e-74	258.0	COG2962@1|root,COG2962@2|Bacteria,4NPB9@976|Bacteroidetes,1IJ0F@117743|Flavobacteriia,2NTQI@237|Flavobacterium	976|Bacteroidetes	S	EamA-like transporter family	yojE	-	-	ko:K05786	-	-	-	-	ko00000,ko02000	2.A.7.7	-	-	EamA
BYD3_k127_8182620_82	714943.Mucpa_4688	1.345e-51	185.0	2C5VR@1|root,32CJG@2|Bacteria,4NQV8@976|Bacteroidetes,1ITMX@117747|Sphingobacteriia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_8182620_47	504472.Slin_2652	2.048e-110	363.0	COG1082@1|root,COG1082@2|Bacteria,4NFMD@976|Bacteroidetes,47JA9@768503|Cytophagia	976|Bacteroidetes	G	Xylose isomerase domain protein TIM barrel	-	-	-	-	-	-	-	-	-	-	-	-	AP_endonuc_2
BYD3_k127_8182620_7	761193.Runsl_4937	1.396e-235	734.0	COG0673@1|root,COG0673@2|Bacteria,4NF96@976|Bacteroidetes,47KB4@768503|Cytophagia	976|Bacteroidetes	S	Oxidoreductase family, NAD-binding Rossmann fold	-	-	-	-	-	-	-	-	-	-	-	-	GFO_IDH_MocA
BYD3_k127_8182620_27	1123508.JH636442_gene4074	4.815e-148	477.0	COG2055@1|root,COG2055@2|Bacteria,2J36Z@203682|Planctomycetes	203682|Planctomycetes	C	Malate/L-lactate dehydrogenase	-	-	-	-	-	-	-	-	-	-	-	-	Ldh_2
BYD3_k127_8182620_54	1121931.AUHG01000010_gene431	1.189e-96	329.0	2C8CV@1|root,2Z8NV@2|Bacteria,4NH60@976|Bacteroidetes,1HZCW@117743|Flavobacteriia	976|Bacteroidetes	S	Protein of unknown function (DUF3095)	-	-	-	-	-	-	-	-	-	-	-	-	DUF3095
BYD3_k127_8182620_57	1121904.ARBP01000015_gene214	1.725e-91	306.0	COG4976@1|root,COG4976@2|Bacteria	2|Bacteria	O	Methyltransferase	-	-	-	-	-	-	-	-	-	-	-	-	DinB_2,FGE-sulfatase,Glycos_transf_2,HTH_20,Methyltransf_11,Methyltransf_23,Methyltransf_25,Methyltransf_31
BYD3_k127_8182620_91	574376.BAMA_19765	6.089e-34	135.0	COG1051@1|root,COG1051@2|Bacteria,1VJ3C@1239|Firmicutes,4HQHF@91061|Bacilli,1ZIGN@1386|Bacillus	91061|Bacilli	F	Belongs to the Nudix hydrolase family	-	-	-	-	-	-	-	-	-	-	-	-	NUDIX
BYD3_k127_8182620_12	1237149.C900_02443	2.94e-181	577.0	COG4310@1|root,COG4310@2|Bacteria,4NH84@976|Bacteroidetes,47U0I@768503|Cytophagia	976|Bacteroidetes	S	Domain of unknown function (DUF2172)	-	-	-	-	-	-	-	-	-	-	-	-	DUF2172,DUF4910,HTH_47
BYD3_k127_8182620_49	926562.Oweho_2065	5.534e-107	363.0	COG0642@1|root,COG3850@1|root,COG2205@2|Bacteria,COG3850@2|Bacteria,4NEIS@976|Bacteroidetes,1HXGB@117743|Flavobacteriia,2PBKD@246874|Cryomorphaceae	976|Bacteroidetes	T	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase	arlS_1	-	-	-	-	-	-	-	-	-	-	-	HAMP,HATPase_c,HisKA
BYD3_k127_8182620_66	925409.KI911562_gene2377	5.327e-73	252.0	COG0745@1|root,COG0745@2|Bacteria,4NE77@976|Bacteroidetes,1IRRJ@117747|Sphingobacteriia	976|Bacteroidetes	K	Two component transcriptional regulator, winged helix family	-	-	-	ko:K07665	ko02020,map02020	M00452,M00745	-	-	ko00000,ko00001,ko00002,ko01504,ko02022	-	-	-	Response_reg,Trans_reg_C
BYD3_k127_8182620_81	1237149.C900_02445	2.076e-53	193.0	COG1898@1|root,COG1898@2|Bacteria,4NP11@976|Bacteroidetes,47PSR@768503|Cytophagia	976|Bacteroidetes	G	Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4- hexulose	-	-	5.1.3.13	ko:K01790	ko00521,ko00523,ko01130,map00521,map00523,map01130	M00793	R06514	RC01531	ko00000,ko00001,ko00002,ko01000	-	-	-	dTDP_sugar_isom
BYD3_k127_8182620_43	743722.Sph21_4161	3.237e-123	402.0	COG1082@1|root,COG1082@2|Bacteria,4NJZQ@976|Bacteroidetes,1IVKX@117747|Sphingobacteriia	976|Bacteroidetes	G	Xylose isomerase-like TIM barrel	-	-	-	-	-	-	-	-	-	-	-	-	AP_endonuc_2
BYD3_k127_8182620_60	929562.Emtol_2271	2.418e-79	267.0	COG2318@1|root,COG2318@2|Bacteria,4NN7V@976|Bacteroidetes,47QXV@768503|Cytophagia	976|Bacteroidetes	S	DinB family	-	-	-	-	-	-	-	-	-	-	-	-	DinB,DinB_2
BYD3_k127_8182620_102	1408433.JHXV01000005_gene2462	1.138e-13	72.0	2E5WH@1|root,30K07@2|Bacteria,4P5HE@976|Bacteroidetes,1ICRB@117743|Flavobacteriia,2PBVH@246874|Cryomorphaceae	976|Bacteroidetes	J	23S rRNA-intervening sequence protein	-	-	-	-	-	-	-	-	-	-	-	-	23S_rRNA_IVP
BYD3_k127_8182620_76	1121468.AUBR01000028_gene1521	9.011e-63	229.0	COG0657@1|root,COG0657@2|Bacteria,1UZ7B@1239|Firmicutes,25B2C@186801|Clostridia	186801|Clostridia	I	Psort location Cytoplasmic, score	-	-	3.1.1.83	ko:K14731	ko00903,ko00930,ko01220,map00903,map00930,map01220	-	R03751,R06390,R06391,R06392,R06393	RC00713,RC00983,RC01505	ko00000,ko00001,ko01000	-	-	-	Abhydrolase_3
BYD3_k127_8182620_52	1237149.C900_02624	4.608e-101	334.0	2C8XG@1|root,2Z7PK@2|Bacteria,4NEU8@976|Bacteroidetes,47P85@768503|Cytophagia	976|Bacteroidetes	S	Protein of unknown function (DUF4197)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4197
BYD3_k127_8182620_16	1237149.C900_02623	7.128e-172	548.0	COG1058@1|root,COG1546@1|root,COG1058@2|Bacteria,COG1546@2|Bacteria,4NDVV@976|Bacteroidetes,47JN4@768503|Cytophagia	976|Bacteroidetes	S	CinA-like protein	cinA	-	3.5.1.42	ko:K03742,ko:K03743	ko00760,map00760	-	R02322	RC00100	ko00000,ko00001,ko01000	-	-	-	CinA,MoCF_biosynth
BYD3_k127_8182620_73	945713.IALB_0966	4.291e-64	244.0	COG4249@1|root,COG4249@2|Bacteria	2|Bacteria	S	B-1 B cell differentiation	-	-	-	-	-	-	-	-	-	-	-	-	Peptidase_C14
BYD3_k127_8182620_106	436229.JOEH01000051_gene6277	3.84e-07	63.0	COG3055@1|root,COG4934@1|root,COG3055@2|Bacteria,COG4934@2|Bacteria,2IF2T@201174|Actinobacteria,2NM1S@228398|Streptacidiphilus	201174|Actinobacteria	O	Carboxypeptidase regulatory-like domain	-	-	-	-	-	-	-	-	-	-	-	-	CarboxypepD_reg,Kelch_1
BYD3_k127_8182620_14	1279009.ADICEAN_00089	1.686e-175	560.0	COG0508@1|root,COG0508@2|Bacteria,4NED0@976|Bacteroidetes,47JDY@768503|Cytophagia	976|Bacteroidetes	C	Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex	bfmBB	-	2.3.1.61	ko:K00658	ko00020,ko00310,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00310,map01100,map01110,map01120,map01130,map01200	M00009,M00011,M00032	R02570,R02571,R08549	RC00004,RC02727,RC02833	br01601,ko00000,ko00001,ko00002,ko01000	-	-	-	2-oxoacid_dh,Biotin_lipoyl,E3_binding
BYD3_k127_8182620_10	755732.Fluta_1214	8.06e-191	601.0	COG0626@1|root,COG0626@2|Bacteria,4NF0Q@976|Bacteroidetes,1HXPE@117743|Flavobacteriia,2PA8D@246874|Cryomorphaceae	976|Bacteroidetes	E	PFAM Cys Met metabolism PLP-dependent enzyme	metC	-	2.5.1.48,4.4.1.1,4.4.1.8	ko:K01739,ko:K01758,ko:K01760	ko00260,ko00270,ko00450,ko00920,ko01100,ko01110,ko01130,ko01230,map00260,map00270,map00450,map00920,map01100,map01110,map01130,map01230	M00017,M00338	R00782,R00999,R01001,R01286,R01288,R02408,R02508,R03217,R03260,R04770,R04930,R04941,R04944,R04945,R04946,R09366	RC00020,RC00056,RC00069,RC00348,RC00382,RC00420,RC00488,RC00710,RC01209,RC01210,RC01245,RC02303,RC02848,RC02866	ko00000,ko00001,ko00002,ko01000,ko04147	-	-	-	Cys_Met_Meta_PP
BYD3_k127_8182620_96	1237149.C900_00007	5.626e-28	122.0	COG3637@1|root,COG3637@2|Bacteria	2|Bacteria	M	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety	oprH	-	-	ko:K02014,ko:K07275,ko:K16087	-	-	-	-	ko00000,ko02000	1.B.14,1.B.14.2	-	-	OMP_b-brl,Plug,STN,TonB_dep_Rec
BYD3_k127_8182620_25	485917.Phep_1317	8.894e-150	522.0	COG0745@1|root,COG2207@1|root,COG3292@1|root,COG5002@1|root,COG0745@2|Bacteria,COG2207@2|Bacteria,COG3292@2|Bacteria,COG5002@2|Bacteria,4P0IA@976|Bacteroidetes	976|Bacteroidetes	T	histidine kinase-, DNA gyrase B	-	-	-	-	-	-	-	-	-	-	-	-	HATPase_c,HTH_18,HisKA,Reg_prop,Response_reg,Y_Y_Y
BYD3_k127_8182620_20	926549.KI421517_gene109	3.62e-162	519.0	COG0477@1|root,COG2814@2|Bacteria,4NEQU@976|Bacteroidetes,47KKT@768503|Cytophagia	976|Bacteroidetes	EGP	Major facilitator superfamily MFS_1	-	-	-	-	-	-	-	-	-	-	-	-	MFS_1
BYD3_k127_8182620_28	1237149.C900_02616	7.362e-147	490.0	COG0457@1|root,COG0642@1|root,COG0457@2|Bacteria,COG2205@2|Bacteria,4NQHU@976|Bacteroidetes,47R06@768503|Cytophagia	976|Bacteroidetes	T	His Kinase A (phosphoacceptor) domain	-	-	-	-	-	-	-	-	-	-	-	-	HATPase_c,HisKA,TPR_12,TPR_8
BYD3_k127_8182620_100	1304883.KI912532_gene3253	7.783e-15	78.0	2EIBB@1|root,33C2R@2|Bacteria,1NETH@1224|Proteobacteria,2VXET@28216|Betaproteobacteria,2KXHM@206389|Rhodocyclales	206389|Rhodocyclales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_8182620_26	1237149.C900_02611	1.213e-149	478.0	COG1028@1|root,COG1028@2|Bacteria,4NE45@976|Bacteroidetes,47JX5@768503|Cytophagia	976|Bacteroidetes	IQ	Short-chain dehydrogenase reductase SDR	ykuF	-	-	ko:K13774	ko00281,map00281	-	R08087,R08096,R10125,R10126	RC00080,RC00087	ko00000,ko00001	-	-	-	adh_short_C2
BYD3_k127_8182620_41	1237149.C900_02609	2.876e-127	417.0	COG0156@1|root,COG0156@2|Bacteria,4NEXI@976|Bacteroidetes,47MTG@768503|Cytophagia	976|Bacteroidetes	E	PFAM Aminotransferase class I and II	bioF	-	2.3.1.29,2.3.1.47	ko:K00639,ko:K00652	ko00260,ko00780,ko01100,map00260,map00780,map01100	M00123,M00573,M00577	R00371,R03210,R10124	RC00004,RC00039,RC00394,RC02725	ko00000,ko00001,ko00002,ko01000,ko01007	-	-	-	Aminotran_1_2
BYD3_k127_8182620_72	1124780.ANNU01000024_gene3039	5.207e-66	231.0	COG0132@1|root,COG0132@2|Bacteria,4NGKI@976|Bacteroidetes,47Q2B@768503|Cytophagia	976|Bacteroidetes	H	Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring	bioD	-	6.3.3.3	ko:K01935	ko00780,ko01100,map00780,map01100	M00123,M00573,M00577	R03182	RC00868	ko00000,ko00001,ko00002,ko01000	-	-	-	AAA_26
BYD3_k127_8182620_13	1237149.C900_02607	2.533e-179	571.0	COG0161@1|root,COG0161@2|Bacteria,4NEJN@976|Bacteroidetes,47KV0@768503|Cytophagia	976|Bacteroidetes	H	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family	bioA	-	2.6.1.62	ko:K00833	ko00780,ko01100,map00780,map01100	M00123,M00573,M00577	R03231	RC00006,RC00887	ko00000,ko00001,ko00002,ko01000,ko01007	-	-	-	Aminotran_3,BATS,Radical_SAM
BYD3_k127_8182620_17	1237149.C900_02605	1.78e-170	567.0	COG1520@1|root,COG1520@2|Bacteria,4NHQ3@976|Bacteroidetes,47MS3@768503|Cytophagia	976|Bacteroidetes	S	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane	-	-	-	-	-	-	-	-	-	-	-	-	DUF3352
BYD3_k127_8182620_107	1178825.ALIH01000026_gene1866	2.283e-05	49.0	2DEFQ@1|root,2ZMUG@2|Bacteria,4P7CS@976|Bacteroidetes,1IBT1@117743|Flavobacteriia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_8287670_28	1237149.C900_03149	4.125e-135	460.0	COG3209@1|root,COG4625@1|root,COG3209@2|Bacteria,COG4625@2|Bacteria	2|Bacteria	T	pathogenesis	rhgB	-	4.2.2.23	ko:K07004,ko:K18195,ko:K20276	ko02024,map02024	-	-	-	ko00000,ko00001,ko01000	-	PL4	-	CBM-like,He_PIG,RhgB_N,SprB,fn3_3
BYD3_k127_8287670_58	452637.Oter_3033	5.136e-43	160.0	COG3631@1|root,COG3631@2|Bacteria	2|Bacteria	S	light absorption	-	-	-	ko:K06893	-	-	-	-	ko00000	-	-	-	DUF2358,SnoaL_2
BYD3_k127_8287670_50	1121904.ARBP01000006_gene3740	7.639e-53	192.0	COG0457@1|root,COG0457@2|Bacteria,4PBAK@976|Bacteroidetes,47VJ2@768503|Cytophagia	976|Bacteroidetes	S	Tetratricopeptide repeat	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_8287670_76	1239962.C943_01767	2.191e-06	59.0	28I8D@1|root,2ZBHJ@2|Bacteria,4NHI9@976|Bacteroidetes,47KUP@768503|Cytophagia	976|Bacteroidetes	S	Domain of unknown function (DUF4249)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4249
BYD3_k127_8287670_13	1237149.C900_00838	1.453e-210	679.0	COG0577@1|root,COG0577@2|Bacteria,4NDUK@976|Bacteroidetes,47U5S@768503|Cytophagia	976|Bacteroidetes	V	MacB-like periplasmic core domain	-	-	-	ko:K02004	-	M00258	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	FtsX,MacB_PCD
BYD3_k127_8287670_23	1237149.C900_00002	5.35e-160	508.0	COG0825@1|root,COG0825@2|Bacteria,4NEVU@976|Bacteroidetes,47JPY@768503|Cytophagia	976|Bacteroidetes	I	Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA	accA	-	2.1.3.15,6.4.1.2	ko:K01962	ko00061,ko00620,ko00640,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00061,map00620,map00640,map00720,map01100,map01110,map01120,map01130,map01200,map01212	M00082,M00376	R00742,R04386	RC00040,RC00253,RC00367	ko00000,ko00001,ko00002,ko01000	-	-	-	ACCA
BYD3_k127_8287670_26	1237149.C900_00003	1.079e-141	453.0	COG0491@1|root,COG0491@2|Bacteria,4NE98@976|Bacteroidetes,47JCR@768503|Cytophagia	976|Bacteroidetes	S	PFAM Metallo-beta-lactamase superfamily	-	-	-	-	-	-	-	-	-	-	-	-	Lactamase_B
BYD3_k127_8287670_44	1121859.KB890759_gene1939	3.817e-71	249.0	COG1752@1|root,COG1752@2|Bacteria,4NERH@976|Bacteroidetes,47JZ5@768503|Cytophagia	976|Bacteroidetes	S	esterase of the alpha-beta hydrolase superfamily	-	-	-	ko:K07001	-	-	-	-	ko00000	-	-	-	Patatin
BYD3_k127_8287670_64	1237149.C900_00007	3.65e-31	132.0	COG3637@1|root,COG3637@2|Bacteria	2|Bacteria	M	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety	oprH	-	-	ko:K02014,ko:K07275,ko:K16087	-	-	-	-	ko00000,ko02000	1.B.14,1.B.14.2	-	-	OMP_b-brl,Plug,STN,TonB_dep_Rec
BYD3_k127_8287670_49	1237149.C900_00012	4.735e-54	197.0	COG3637@1|root,COG3637@2|Bacteria,4NR9K@976|Bacteroidetes,47QK5@768503|Cytophagia	976|Bacteroidetes	M	Outer membrane protein beta-barrel domain	-	-	-	-	-	-	-	-	-	-	-	-	OMP_b-brl,OMP_b-brl_2
BYD3_k127_8287670_17	153721.MYP_765	5.373e-188	595.0	COG0162@1|root,COG0162@2|Bacteria,4NF19@976|Bacteroidetes,47JXG@768503|Cytophagia	976|Bacteroidetes	J	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)	tyrS	GO:0003674,GO:0003824,GO:0004812,GO:0004831,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016070,GO:0016874,GO:0016875,GO:0019752,GO:0034641,GO:0034660,GO:0043038,GO:0043039,GO:0043170,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564	6.1.1.1	ko:K01866	ko00970,map00970	M00359,M00360	R02918	RC00055,RC00523	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029	-	-	-	S4,tRNA-synt_1b
BYD3_k127_8287670_59	700598.Niako_6657	1.145e-42	163.0	COG0288@1|root,COG0288@2|Bacteria,4NEJT@976|Bacteroidetes,1IQ7Q@117747|Sphingobacteriia	976|Bacteroidetes	P	Reversible hydration of carbon dioxide	-	-	4.2.1.1	ko:K01673	ko00910,map00910	-	R00132,R10092	RC02807	ko00000,ko00001,ko01000	-	-	-	Pro_CA
BYD3_k127_8287670_22	761193.Runsl_2495	5.71e-170	548.0	COG0659@1|root,COG0659@2|Bacteria,4NE9G@976|Bacteroidetes,47MPC@768503|Cytophagia	976|Bacteroidetes	P	COGs COG0659 Sulfate permease and related transporter (MFS superfamily)	-	-	-	-	-	-	-	-	-	-	-	-	Sulfate_transp
BYD3_k127_8287670_40	985255.APHJ01000021_gene1703	1.133e-92	311.0	COG0288@1|root,COG0288@2|Bacteria,4NEJT@976|Bacteroidetes,1HXG3@117743|Flavobacteriia,2P60E@244698|Gillisia	976|Bacteroidetes	P	Carbonic anhydrase	cynT	-	4.2.1.1	ko:K01673	ko00910,map00910	-	R00132,R10092	RC02807	ko00000,ko00001,ko01000	-	-	-	Pro_CA
BYD3_k127_8287670_57	522772.Dacet_2356	2.243e-45	181.0	COG0659@1|root,COG0659@2|Bacteria,2GG7H@200930|Deferribacteres	200930|Deferribacteres	P	Sulfate transporter antisigma-factor antagonist STAS	-	-	-	ko:K03321	-	-	-	-	ko00000,ko02000	2.A.53.3	-	-	STAS,Sulfate_transp
BYD3_k127_8287670_45	880070.Cycma_1639	1.103e-66	230.0	COG4696@1|root,COG4696@2|Bacteria,4NNW2@976|Bacteroidetes,47PPX@768503|Cytophagia	976|Bacteroidetes	S	PFAM Phosphoribosyl-ATP pyrophosphohydrolase	-	-	-	-	-	-	-	-	-	-	-	-	PRA-PH
BYD3_k127_8287670_35	1237149.C900_00026	1.874e-101	338.0	COG1512@1|root,COG1512@2|Bacteria	2|Bacteria	S	TPM domain	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_8287670_9	1237149.C900_00028	4.543e-260	817.0	COG0793@1|root,COG0793@2|Bacteria,4NFK4@976|Bacteroidetes,47KAN@768503|Cytophagia	976|Bacteroidetes	M	Belongs to the peptidase S41A family	prc	-	3.4.21.102	ko:K03797	-	-	-	-	ko00000,ko01000,ko01002	-	-	-	DUF3340,PDZ,Peptidase_S41
BYD3_k127_8287670_1	1237149.C900_00062	0.0	1331.0	COG1131@1|root,COG1131@2|Bacteria,4NHPD@976|Bacteroidetes,47KQD@768503|Cytophagia	976|Bacteroidetes	V	ABC-2 type transporter	-	-	-	-	-	-	-	-	-	-	-	-	ABC2_membrane,ABC_tran,TerB
BYD3_k127_8287670_70	755732.Fluta_3919	1.874e-13	76.0	COG3667@1|root,COG3667@2|Bacteria	2|Bacteria	P	copper resistance	copB	-	-	ko:K07233,ko:K07798,ko:K14588	ko02020,map02020	-	-	-	ko00000,ko00001,ko02000	2.A.6.1.4,8.A.1	-	-	CopB,Cu-oxidase,Cu-oxidase_2,Cu-oxidase_3,CusF_Ec,HlyD_D23
BYD3_k127_8287670_14	1150600.ADIARSV_2581	1.109e-209	664.0	COG0477@1|root,COG0477@2|Bacteria,4NFY1@976|Bacteroidetes,1IP90@117747|Sphingobacteriia	976|Bacteroidetes	EGP	transporter	-	-	-	-	-	-	-	-	-	-	-	-	Sugar_tr
BYD3_k127_8287670_55	1450525.JATV01000020_gene3119	9.233e-47	178.0	294DM@1|root,2ZRTK@2|Bacteria,4NPQ1@976|Bacteroidetes,1I6ZZ@117743|Flavobacteriia,2NW49@237|Flavobacterium	976|Bacteroidetes	S	Domain of unknown function (DUF4184)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4184
BYD3_k127_8287670_4	1237149.C900_00071	7.471e-300	937.0	COG1793@1|root,COG3285@1|root,COG1793@2|Bacteria,COG3285@2|Bacteria,4NESR@976|Bacteroidetes,47NMI@768503|Cytophagia	976|Bacteroidetes	L	DNA polymerase Ligase (LigD)	-	-	-	-	-	-	-	-	-	-	-	-	DNA_ligase_A_C,DNA_ligase_A_M,LigD_N
BYD3_k127_8287670_46	1123057.P872_13775	2.252e-65	239.0	COG0457@1|root,COG0457@2|Bacteria,4NGGZ@976|Bacteroidetes,47JWQ@768503|Cytophagia	976|Bacteroidetes	S	TPR repeat-containing protein	-	-	-	-	-	-	-	-	-	-	-	-	TPR_1,TPR_11,TPR_16,TPR_2,TPR_8
BYD3_k127_8287670_47	1189612.A33Q_3118	6.021e-59	211.0	28HM7@1|root,2Z7VU@2|Bacteria,4NGV1@976|Bacteroidetes,47PTW@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_8287670_21	866536.Belba_2268	1.946e-170	544.0	COG0661@1|root,COG0661@2|Bacteria,4NDUP@976|Bacteroidetes,47JE8@768503|Cytophagia	976|Bacteroidetes	S	unusual protein kinase	-	-	-	-	-	-	-	-	-	-	-	-	ABC1,APH
BYD3_k127_8287670_33	1237149.C900_00072	1.087e-109	361.0	COG1273@1|root,COG1273@2|Bacteria,4NHHQ@976|Bacteroidetes,47PE5@768503|Cytophagia	976|Bacteroidetes	L	With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD	ku	-	-	ko:K10979	ko03450,map03450	-	-	-	ko00000,ko00001,ko03400	-	-	-	Ku
BYD3_k127_8287670_56	1237149.C900_00073	2.12e-45	171.0	COG0457@1|root,COG0457@2|Bacteria	1237149.C900_00073|-	S	peptidyl-tyrosine sulfation	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_8287670_54	700598.Niako_2074	2.438e-47	175.0	2DVQJ@1|root,32UZZ@2|Bacteria,4PGTB@976|Bacteroidetes,1IUA6@117747|Sphingobacteriia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_8287670_29	1237149.C900_04487	8.956e-125	411.0	COG4339@1|root,COG4339@2|Bacteria,4PKIS@976|Bacteroidetes,47KP1@768503|Cytophagia	976|Bacteroidetes	S	PFAM Metal-dependent phosphohydrolase, HD	-	-	-	-	-	-	-	-	-	-	-	-	HD
BYD3_k127_8287670_2	1237149.C900_00480	0.0	1309.0	COG1409@1|root,COG4775@1|root,COG1409@2|Bacteria,COG4775@2|Bacteria,4NF9N@976|Bacteroidetes,47JAP@768503|Cytophagia	976|Bacteroidetes	M	Calcineurin-like phosphoesterase	-	-	-	-	-	-	-	-	-	-	-	-	Bac_surface_Ag,Metallophos
BYD3_k127_8287670_3	1237149.C900_05255	2.802e-309	981.0	COG3291@1|root,COG3291@2|Bacteria,4NJ47@976|Bacteroidetes,47JQU@768503|Cytophagia	976|Bacteroidetes	N	C-terminal domain of CHU protein family	-	-	-	-	-	-	-	-	-	-	-	-	CHU_C,PKD,SBBP
BYD3_k127_8287670_34	1144313.PMI10_01440	2.164e-103	344.0	COG0300@1|root,COG0300@2|Bacteria,4NKNE@976|Bacteroidetes,1IMIN@117743|Flavobacteriia,2NTWH@237|Flavobacterium	976|Bacteroidetes	S	Belongs to the short-chain dehydrogenases reductases (SDR) family	-	-	-	ko:K07124	-	-	-	-	ko00000	-	-	-	adh_short
BYD3_k127_8287670_51	143224.JQMD01000002_gene2997	1.663e-52	195.0	COG0596@1|root,COG0596@2|Bacteria,4NY3Z@976|Bacteroidetes	976|Bacteroidetes	S	Alpha/beta hydrolase family	-	-	-	-	-	-	-	-	-	-	-	-	Abhydrolase_6
BYD3_k127_8287670_74	1121106.JQKB01000005_gene2162	1.062e-07	55.0	COG0596@1|root,COG0596@2|Bacteria,1R9VJ@1224|Proteobacteria,2U26I@28211|Alphaproteobacteria	28211|Alphaproteobacteria	S	alpha/beta hydrolase fold	MA20_06765	-	-	-	-	-	-	-	-	-	-	-	Abhydrolase_1,Abhydrolase_6
BYD3_k127_8287670_52	1237149.C900_00516	1.27e-51	189.0	COG1011@1|root,COG1011@2|Bacteria,4NQT8@976|Bacteroidetes,47QH7@768503|Cytophagia	976|Bacteroidetes	S	TIGRFAM haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED	yihX	-	3.1.3.10	ko:K20866	ko00010,ko01120,map00010,map01120	-	R00947	RC00078	ko00000,ko00001,ko01000	-	-	-	HAD_2
BYD3_k127_8287670_24	1237149.C900_00515	5.287e-153	492.0	COG0750@1|root,COG0750@2|Bacteria,4NI5C@976|Bacteroidetes,47K57@768503|Cytophagia	976|Bacteroidetes	M	Peptidase family M50	-	-	-	-	-	-	-	-	-	-	-	-	Peptidase_M50
BYD3_k127_8287670_11	1237149.C900_04343	3.05e-229	718.0	COG4770@1|root,COG4770@2|Bacteria,4NM1W@976|Bacteroidetes,47M7U@768503|Cytophagia	976|Bacteroidetes	I	PFAM Carbamoyl-phosphate synthase L chain, ATP binding	-	-	6.3.4.14,6.4.1.2,6.4.1.3	ko:K01961,ko:K01965	ko00061,ko00280,ko00620,ko00630,ko00640,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00061,map00280,map00620,map00630,map00640,map00720,map01100,map01110,map01120,map01130,map01200,map01212	M00082,M00373,M00376,M00741	R00742,R01859,R04385	RC00040,RC00097,RC00253,RC00367,RC00609	ko00000,ko00001,ko00002,ko01000	-	-	-	Biotin_carb_C,Biotin_carb_N,CPSase_L_D2
BYD3_k127_8287670_12	1237149.C900_04344	3.034e-213	670.0	COG0156@1|root,COG0156@2|Bacteria,4NFRY@976|Bacteroidetes,47KDV@768503|Cytophagia	976|Bacteroidetes	E	PFAM Aminotransferase class I and II	-	-	2.3.1.29	ko:K00639	ko00260,map00260	-	R00371	RC00004,RC00394	ko00000,ko00001,ko01000,ko01007	-	-	-	Aminotran_1_2
BYD3_k127_8287670_66	1454007.JAUG01000061_gene473	5.782e-24	101.0	2BVK8@1|root,32Y0S@2|Bacteria,4NUUA@976|Bacteroidetes,1ITXR@117747|Sphingobacteriia	976|Bacteroidetes	S	histone H1-like protein	-	-	-	-	-	-	-	-	-	-	-	-	Hc1
BYD3_k127_8287670_32	1237149.C900_02553	4.648e-112	368.0	COG0329@1|root,COG0329@2|Bacteria,4NFP9@976|Bacteroidetes,47MC7@768503|Cytophagia	976|Bacteroidetes	E	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)	dapA	-	4.3.3.7	ko:K01714	ko00261,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00261,map00300,map01100,map01110,map01120,map01130,map01230	M00016,M00525,M00526,M00527	R10147	RC03062,RC03063	ko00000,ko00001,ko00002,ko01000	-	-	-	DHDPS
BYD3_k127_8287670_61	1237149.C900_02552	2.598e-41	157.0	2ENX1@1|root,33GHZ@2|Bacteria,4NXFU@976|Bacteroidetes,47WQI@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_8287670_7	643867.Ftrac_0818	6.753e-277	865.0	COG0272@1|root,COG0272@2|Bacteria,4NE2X@976|Bacteroidetes,47KR4@768503|Cytophagia	976|Bacteroidetes	L	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA	ligA	GO:0003674,GO:0003824,GO:0003909,GO:0003911,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006266,GO:0006281,GO:0006284,GO:0006288,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016874,GO:0016886,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050896,GO:0051103,GO:0051716,GO:0071704,GO:0090304,GO:0140097,GO:1901360	6.5.1.2	ko:K01972	ko03030,ko03410,ko03420,ko03430,map03030,map03410,map03420,map03430	-	R00382	RC00005	ko00000,ko00001,ko01000,ko03032,ko03400	-	-	-	BRCT,DNA_ligase_OB,DNA_ligase_ZBD,DNA_ligase_aden,HHH_2,HHH_5
BYD3_k127_8287670_10	1124780.ANNU01000005_gene2467	7.32e-242	761.0	COG0308@1|root,COG0308@2|Bacteria,4NEXH@976|Bacteroidetes,47JGQ@768503|Cytophagia	976|Bacteroidetes	E	PFAM Peptidase M1, membrane alanine aminopeptidase	-	-	3.4.11.2	ko:K01256	ko00480,ko01100,map00480,map01100	-	R00899,R04951	RC00096,RC00141	ko00000,ko00001,ko01000,ko01002	-	-	-	Peptidase_M1
BYD3_k127_8287670_68	1250005.PHEL85_1251	4.903e-22	108.0	2F4EN@1|root,33X4W@2|Bacteria,4P3J2@976|Bacteroidetes,1I902@117743|Flavobacteriia,3VWTF@52959|Polaribacter	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_8287670_69	1121957.ATVL01000009_gene992	9.356e-17	86.0	2DPE1@1|root,331PZ@2|Bacteria,4NV5C@976|Bacteroidetes,47R28@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_8287670_71	761193.Runsl_3662	2.73e-10	67.0	2DKYE@1|root,32UFY@2|Bacteria,4NU6C@976|Bacteroidetes,47R7T@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_8287670_41	926549.KI421517_gene1358	3.75e-83	280.0	COG1595@1|root,COG1595@2|Bacteria,4NMC0@976|Bacteroidetes,47N5B@768503|Cytophagia	976|Bacteroidetes	K	Belongs to the sigma-70 factor family. ECF subfamily	rpoE	-	-	ko:K03088	-	-	-	-	ko00000,ko03021	-	-	-	Sigma70_r2,Sigma70_r4_2
BYD3_k127_8287670_31	1237149.C900_02546	1.272e-124	408.0	COG1932@1|root,COG1932@2|Bacteria,4PKN4@976|Bacteroidetes,47J9A@768503|Cytophagia	976|Bacteroidetes	EH	Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine	-	-	2.6.1.52	ko:K00831	ko00260,ko00680,ko00750,ko01100,ko01120,ko01130,ko01200,ko01230,map00260,map00680,map00750,map01100,map01120,map01130,map01200,map01230	M00020,M00124	R04173,R05085	RC00006,RC00036	ko00000,ko00001,ko00002,ko01000,ko01007	-	-	-	Aminotran_5
BYD3_k127_8287670_39	1237149.C900_00736	1.874e-95	319.0	COG2126@1|root,COG2126@2|Bacteria,4NEX1@976|Bacteroidetes,47NAG@768503|Cytophagia	976|Bacteroidetes	J	PFAM Ion transport protein	-	-	-	ko:K10716	-	-	-	-	ko00000,ko02000	1.A.1.1,1.A.1.13,1.A.1.17,1.A.1.24,1.A.1.25,1.A.1.6	-	-	Ion_trans
BYD3_k127_8287670_38	929556.Solca_1281	9.945e-96	319.0	28I6D@1|root,2Z89E@2|Bacteria,4NIIX@976|Bacteroidetes,1IR84@117747|Sphingobacteriia	976|Bacteroidetes	S	EcsC protein family	-	-	-	-	-	-	-	-	-	-	-	-	EcsC
BYD3_k127_8287670_60	1173264.KI913951_gene4626	1.969e-42	160.0	COG2764@1|root,COG2764@2|Bacteria,1GKD8@1117|Cyanobacteria,1HGVZ@1150|Oscillatoriales	1117|Cyanobacteria	S	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily	-	-	-	-	-	-	-	-	-	-	-	-	Glyoxalase
BYD3_k127_8287670_15	1242864.D187_007931	3.596e-196	621.0	COG2133@1|root,COG2133@2|Bacteria,1MVK5@1224|Proteobacteria,42MU3@68525|delta/epsilon subdivisions,2WKTF@28221|Deltaproteobacteria,2YV31@29|Myxococcales	28221|Deltaproteobacteria	G	Glucose / Sorbosone dehydrogenase	yliI	-	-	-	-	-	-	-	-	-	-	-	GSDH
BYD3_k127_8287670_77	760117.JN27_16405	8.595e-06	55.0	COG3652@1|root,COG3652@2|Bacteria,1N6QU@1224|Proteobacteria,2WG1Y@28216|Betaproteobacteria,477GH@75682|Oxalobacteraceae	28216|Betaproteobacteria	S	Domain of unknown function (DUF4142)	-	-	-	ko:K08995	-	-	-	-	ko00000	-	-	-	DUF4142
BYD3_k127_8287670_63	700598.Niako_5846	5.306e-41	156.0	COG1633@1|root,COG1633@2|Bacteria,4NNYT@976|Bacteroidetes,1J0DK@117747|Sphingobacteriia	976|Bacteroidetes	S	Domain of unknown function (DUF2383)	-	-	-	-	-	-	-	-	-	-	-	-	DUF2383
BYD3_k127_8287670_8	1122621.ATZA01000001_gene1990	1.982e-271	857.0	COG5549@1|root,COG5549@2|Bacteria,4NEA0@976|Bacteroidetes,1IQA8@117747|Sphingobacteriia	976|Bacteroidetes	O	Domain of unknown function (DUF5118)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4953,DUF5117,DUF5118
BYD3_k127_8287670_42	234267.Acid_2457	2.945e-81	288.0	COG1387@1|root,COG1387@2|Bacteria	2|Bacteria	E	zinc ion binding	polX	-	-	ko:K02347,ko:K04477	-	-	-	-	ko00000,ko03400	-	-	-	HHH_8,PHP
BYD3_k127_8287670_37	929562.Emtol_2246	2.616e-98	332.0	COG0657@1|root,COG0657@2|Bacteria,4NJG4@976|Bacteroidetes,47U69@768503|Cytophagia	976|Bacteroidetes	I	Carboxylesterase family	-	-	-	-	-	-	-	-	-	-	-	-	Abhydrolase_3
BYD3_k127_8287670_6	1121904.ARBP01000001_gene5586	8.895e-288	904.0	COG0577@1|root,COG0577@2|Bacteria,4NKYD@976|Bacteroidetes,47MU6@768503|Cytophagia	976|Bacteroidetes	V	MacB-like periplasmic core domain	-	-	-	-	-	-	-	-	-	-	-	-	FtsX,MacB_PCD
BYD3_k127_8287670_16	1123278.KB893559_gene2968	1.268e-191	609.0	COG2610@1|root,COG2610@2|Bacteria,4NFQH@976|Bacteroidetes,47JEB@768503|Cytophagia	976|Bacteroidetes	EG	H gluconate symporter and related	-	-	-	ko:K03299	-	-	-	-	ko00000,ko02000	2.A.8	-	-	GntP_permease
BYD3_k127_8287670_27	926549.KI421517_gene3351	7.087e-140	450.0	COG0451@1|root,COG0451@2|Bacteria,4NE3U@976|Bacteroidetes,47JUZ@768503|Cytophagia	976|Bacteroidetes	M	PFAM NAD dependent epimerase dehydratase family	-	-	1.1.1.410	ko:K22025	-	-	-	-	ko00000,ko01000	-	-	-	Epimerase
BYD3_k127_8287670_19	926549.KI421517_gene3353	3.03e-175	560.0	COG3395@1|root,COG3395@2|Bacteria,4NJY2@976|Bacteroidetes,47NM5@768503|Cytophagia	976|Bacteroidetes	S	Putative nucleotide-binding of sugar-metabolising enzyme	-	-	2.7.1.219,2.7.1.220	ko:K22129	-	-	-	-	ko00000,ko01000	-	-	-	DUF1357_C,DUF1537
BYD3_k127_8287670_25	1237149.C900_00474	4.91e-152	488.0	COG0191@1|root,COG0191@2|Bacteria,4NF5C@976|Bacteroidetes,47MC3@768503|Cytophagia	976|Bacteroidetes	G	fructose-bisphosphate aldolase, class II, yeast E. coli subtype	fbaA	-	4.1.2.13	ko:K01624	ko00010,ko00030,ko00051,ko00680,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00030,map00051,map00680,map00710,map01100,map01110,map01120,map01130,map01200,map01230	M00001,M00003,M00165,M00167,M00344,M00345	R01068,R01070,R01829,R02568	RC00438,RC00439,RC00603,RC00604	ko00000,ko00001,ko00002,ko01000	-	-	-	F_bP_aldolase
BYD3_k127_8287670_5	504472.Slin_0108	1.657e-290	905.0	COG0644@1|root,COG0644@2|Bacteria,4P07W@976|Bacteroidetes,47N5I@768503|Cytophagia	976|Bacteroidetes	C	FAD dependent oxidoreductase	-	-	-	-	-	-	-	-	-	-	-	-	FAD_oxidored
BYD3_k127_8287670_18	1502851.FG93_05450	8.57e-183	585.0	COG0477@1|root,COG0477@2|Bacteria,1MWXZ@1224|Proteobacteria,2TT27@28211|Alphaproteobacteria,3JVI0@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	EGP	Major Facilitator Superfamily	-	-	-	ko:K08167	-	M00713,M00714	-	-	ko00000,ko00002,ko01504,ko02000	2.A.1.3	-	-	MFS_1
BYD3_k127_8287670_48	1279009.ADICEAN_02877	2.68e-58	209.0	COG1309@1|root,COG1309@2|Bacteria,4NMR8@976|Bacteroidetes,47PFA@768503|Cytophagia	976|Bacteroidetes	K	WHG domain	-	-	-	-	-	-	-	-	-	-	-	-	TetR_N,WHG
BYD3_k127_8287670_30	1279009.ADICEAN_02878	1.132e-124	413.0	COG1538@1|root,COG1538@2|Bacteria,4NE4S@976|Bacteroidetes,47KIE@768503|Cytophagia	976|Bacteroidetes	MU	PFAM Outer membrane efflux protein	-	-	-	-	-	-	-	-	-	-	-	-	OEP
BYD3_k127_8287670_36	1279009.ADICEAN_02879	2.174e-99	336.0	COG0845@1|root,COG0845@2|Bacteria,4NF23@976|Bacteroidetes,47MIB@768503|Cytophagia	976|Bacteroidetes	M	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family	-	-	-	-	-	-	-	-	-	-	-	-	Biotin_lipoyl_2,HlyD_3,HlyD_D23
BYD3_k127_8287670_0	1279009.ADICEAN_02880	0.0	1378.0	COG0841@1|root,COG0841@2|Bacteria,4NDZG@976|Bacteroidetes,47MTC@768503|Cytophagia	976|Bacteroidetes	V	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family	-	-	-	-	-	-	-	-	-	-	-	-	ACR_tran
BYD3_k127_8287670_75	1415630.U771_10295	4.624e-07	60.0	COG2197@1|root,COG2197@2|Bacteria,1R8VK@1224|Proteobacteria,1S22T@1236|Gammaproteobacteria	1236|Gammaproteobacteria	K	luxr family transcriptional regulator	-	-	-	-	-	-	-	-	-	-	-	-	GerE
BYD3_k127_8287670_20	1218108.KB908298_gene3432	1.05e-170	547.0	COG0477@1|root,COG0477@2|Bacteria,4NFY1@976|Bacteroidetes,1I0YW@117743|Flavobacteriia	976|Bacteroidetes	EGP	MFS transporter	-	-	-	-	-	-	-	-	-	-	-	-	Sugar_tr
BYD3_k127_8287670_43	313624.NSP_36070	3.543e-81	282.0	COG0500@1|root,COG2226@2|Bacteria,1G0WT@1117|Cyanobacteria,1HMI2@1161|Nostocales	1117|Cyanobacteria	Q	Dimerisation domain	-	-	-	-	-	-	-	-	-	-	-	-	Dimerisation2,Methyltransf_2
BYD3_k127_8287670_53	1123248.KB893316_gene4667	4.984e-50	181.0	COG5646@1|root,COG5646@2|Bacteria,4NSDH@976|Bacteroidetes,1ITAW@117747|Sphingobacteriia	976|Bacteroidetes	S	Domain of unknown function (DU1801)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1801
BYD3_k127_8287670_73	65497.JODV01000004_gene1483	2.709e-08	57.0	COG4912@1|root,COG4912@2|Bacteria,2ID3C@201174|Actinobacteria,4E7JU@85010|Pseudonocardiales	201174|Actinobacteria	L	DNA alkylation repair enzyme	-	-	-	-	-	-	-	-	-	-	-	-	DNA_alkylation
BYD3_k127_8288451_1	1123248.KB893381_gene962	3.81e-187	601.0	COG1413@1|root,COG2010@1|root,COG2133@1|root,COG1413@2|Bacteria,COG2010@2|Bacteria,COG2133@2|Bacteria,4P2AE@976|Bacteroidetes	976|Bacteroidetes	C	E-Z type HEAT repeats	-	-	-	-	-	-	-	-	-	-	-	-	Cytochrom_C,HEAT_2
BYD3_k127_8288451_2	760192.Halhy_4090	2.063e-99	326.0	COG0664@1|root,COG0664@2|Bacteria,4NJ1H@976|Bacteroidetes,1ISIX@117747|Sphingobacteriia	976|Bacteroidetes	K	COGs COG0664 cAMP-binding protein - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase	-	-	-	-	-	-	-	-	-	-	-	-	cNMP_binding
BYD3_k127_8288451_3	760192.Halhy_4091	7.285e-84	280.0	COG2353@1|root,COG2353@2|Bacteria,4NNS8@976|Bacteroidetes,1ITAC@117747|Sphingobacteriia	976|Bacteroidetes	S	Belongs to the UPF0312 family	-	-	-	-	-	-	-	-	-	-	-	-	YceI
BYD3_k127_8288451_0	760192.Halhy_4092	2.598e-191	601.0	COG2070@1|root,COG2070@2|Bacteria,4NF8Z@976|Bacteroidetes,1ISZF@117747|Sphingobacteriia	976|Bacteroidetes	C	PFAM 2-nitropropane dioxygenase NPD	-	-	1.13.12.16	ko:K00459	ko00910,map00910	-	R00025	RC02541,RC02759	ko00000,ko00001,ko01000	-	-	-	NMO
BYD3_k127_8288451_6	880071.Fleli_0301	6.237e-14	72.0	2FGNR@1|root,348IB@2|Bacteria,4P5ZQ@976|Bacteroidetes	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_8288451_8	880071.Fleli_0301	0.0001548	46.0	2FGNR@1|root,348IB@2|Bacteria,4P5ZQ@976|Bacteroidetes	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_8288451_4	143224.JQMD01000002_gene2997	2.482e-71	252.0	COG0596@1|root,COG0596@2|Bacteria,4NY3Z@976|Bacteroidetes	976|Bacteroidetes	S	Alpha/beta hydrolase family	-	-	-	-	-	-	-	-	-	-	-	-	Abhydrolase_6
BYD3_k127_8288451_5	1341155.FSS13T_01000	1.591e-17	89.0	COG3637@1|root,COG3637@2|Bacteria,4NR9K@976|Bacteroidetes,1I34P@117743|Flavobacteriia,2NWCZ@237|Flavobacterium	976|Bacteroidetes	M	Outer membrane protein beta-barrel domain	-	-	-	-	-	-	-	-	-	-	-	-	OMP_b-brl_2
BYD3_k127_8288451_7	1463821.JOGR01000001_gene1332	3.138e-06	50.0	294UC@1|root,32XK4@2|Bacteria	2|Bacteria	S	Protein of unknown function (DUF1579)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1579
BYD3_k127_8319197_14	926549.KI421517_gene1441	3.408e-156	508.0	COG2373@1|root,COG2373@2|Bacteria,4NGYZ@976|Bacteroidetes,47M8I@768503|Cytophagia	976|Bacteroidetes	S	Large extracellular alpha-helical protein	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_8319197_64	1168034.FH5T_20485	2.273e-06	59.0	COG0457@1|root,COG1729@1|root,COG0457@2|Bacteria,COG1729@2|Bacteria,4NE4W@976|Bacteroidetes,2FM3C@200643|Bacteroidia	976|Bacteroidetes	G	Tetratricopeptide repeat protein	-	-	-	-	-	-	-	-	-	-	-	-	TPR_16,TPR_2,TPR_21,TPR_6,TPR_8
BYD3_k127_8319197_24	743722.Sph21_5132	2.033e-104	348.0	COG1216@1|root,COG1216@2|Bacteria,4NFS6@976|Bacteroidetes,1J0W8@117747|Sphingobacteriia	976|Bacteroidetes	M	Glycosyl transferase family 21	-	-	-	-	-	-	-	-	-	-	-	-	Glyco_trans_2_3,Glycos_transf_2
BYD3_k127_8319197_4	1237149.C900_01529	8.255e-264	837.0	COG0577@1|root,COG0577@2|Bacteria,4NDUK@976|Bacteroidetes,47JJN@768503|Cytophagia	976|Bacteroidetes	V	FtsX-like permease family	-	-	-	-	-	-	-	-	-	-	-	-	FtsX,MacB_PCD
BYD3_k127_8319197_16	1237149.C900_05601	2.078e-141	456.0	COG1215@1|root,COG1215@2|Bacteria,4PKF3@976|Bacteroidetes,47XY0@768503|Cytophagia	976|Bacteroidetes	M	glycosyl transferase family 2	-	-	-	-	-	-	-	-	-	-	-	-	Glycos_transf_2
BYD3_k127_8319197_47	1237149.C900_05600	3.397e-31	129.0	2DM6B@1|root,31WK9@2|Bacteria,4NQK1@976|Bacteroidetes,47QS1@768503|Cytophagia	976|Bacteroidetes	S	Protein of unknown function (DUF4199)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4199
BYD3_k127_8319197_13	1237149.C900_05598	1.472e-160	515.0	COG0044@1|root,COG0044@2|Bacteria,4NDUZ@976|Bacteroidetes,47KKP@768503|Cytophagia	976|Bacteroidetes	F	TIGRFAM dihydroorotase, multifunctional complex type	pyrC	-	3.5.2.3	ko:K01465	ko00240,ko01100,map00240,map01100	M00051	R01993	RC00632	ko00000,ko00001,ko00002,ko01000	-	-	-	Amidohydro_1
BYD3_k127_8319197_10	1237149.C900_05597	1.07e-174	569.0	COG1361@1|root,COG1361@2|Bacteria,4PKPA@976|Bacteroidetes	976|Bacteroidetes	M	Aerotolerance regulator N-terminal	-	-	-	-	-	-	-	-	-	-	-	-	BatA,CARDB
BYD3_k127_8319197_39	1237149.C900_05594	1.359e-47	172.0	COG0629@1|root,COG0629@2|Bacteria,4NQBK@976|Bacteroidetes,47RWZ@768503|Cytophagia	976|Bacteroidetes	L	Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism	ssb	-	-	ko:K03111	ko03030,ko03430,ko03440,map03030,map03430,map03440	-	-	-	ko00000,ko00001,ko03029,ko03032,ko03400	-	-	-	SSB
BYD3_k127_8319197_42	1046627.BZARG_2060	2.165e-40	152.0	COG4068@1|root,COG4068@2|Bacteria,4NQ3Z@976|Bacteroidetes,1I2T2@117743|Flavobacteriia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	DUF2116
BYD3_k127_8319197_45	1408473.JHXO01000010_gene3518	1.612e-33	136.0	2AFQQ@1|root,315SK@2|Bacteria,4NJD4@976|Bacteroidetes,2FURH@200643|Bacteroidia	976|Bacteroidetes	L	NUMOD4 motif	-	-	-	-	-	-	-	-	-	-	-	-	HNH_3,NUMOD4
BYD3_k127_8319197_59	1237149.C900_01373	5.321e-11	68.0	COG0071@1|root,COG0071@2|Bacteria,4NXRP@976|Bacteroidetes,47SZP@768503|Cytophagia	976|Bacteroidetes	O	Belongs to the small heat shock protein (HSP20) family	-	-	-	-	-	-	-	-	-	-	-	-	HSP20
BYD3_k127_8319197_1	1237149.C900_01793	0.0	1300.0	COG2319@1|root,COG4249@1|root,COG2319@2|Bacteria,COG4249@2|Bacteria,4NKC3@976|Bacteroidetes,47NP5@768503|Cytophagia	976|Bacteroidetes	S	Caspase domain	-	-	-	-	-	-	-	-	-	-	-	-	Peptidase_C14,WD40
BYD3_k127_8319197_9	1121904.ARBP01000080_gene6042	3.093e-176	568.0	COG1404@1|root,COG1404@2|Bacteria,4NF1M@976|Bacteroidetes,47MAI@768503|Cytophagia	976|Bacteroidetes	O	Peptidase S8 and S53 subtilisin kexin sedolisin	wprA	-	-	-	-	-	-	-	-	-	-	-	Peptidase_S8
BYD3_k127_8319197_53	1123277.KB893177_gene3626	2.149e-18	96.0	COG0793@1|root,COG0793@2|Bacteria,4NEF4@976|Bacteroidetes,47K87@768503|Cytophagia	976|Bacteroidetes	M	PDZ DHR GLGF domain protein	-	-	-	-	-	-	-	-	-	-	-	-	Asp_protease_2,PDZ,PDZ_2
BYD3_k127_8319197_30	655815.ZPR_4217	3.218e-79	271.0	COG0861@1|root,COG0861@2|Bacteria,4NFFD@976|Bacteroidetes,1HXRT@117743|Flavobacteriia	976|Bacteroidetes	P	membrane protein TerC	terC	-	-	-	-	-	-	-	-	-	-	-	TerC
BYD3_k127_8319197_31	1279009.ADICEAN_03656	4.416e-79	275.0	COG1463@1|root,COG1463@2|Bacteria,4NGHE@976|Bacteroidetes,47MRD@768503|Cytophagia	976|Bacteroidetes	Q	ABC-type transport system involved in resistance to organic solvents periplasmic component	-	-	-	ko:K02067	ko02010,map02010	M00210,M00669,M00670	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.27	-	-	MlaD
BYD3_k127_8319197_27	1124780.ANNU01000008_gene2647	7.265e-93	312.0	COG1127@1|root,COG1127@2|Bacteria,4NETJ@976|Bacteroidetes,47TJQ@768503|Cytophagia	976|Bacteroidetes	Q	ATPases associated with a variety of cellular activities	-	-	-	ko:K02065	ko02010,map02010	M00210,M00669,M00670	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.27	-	-	ABC_tran
BYD3_k127_8319197_26	1124780.ANNU01000008_gene2646	1.467e-93	312.0	COG0767@1|root,COG0767@2|Bacteria,4NF7X@976|Bacteroidetes,47K33@768503|Cytophagia	976|Bacteroidetes	Q	ABC-type transport system involved in resistance to organic solvents permease component	-	-	-	ko:K02066	ko02010,map02010	M00210,M00669,M00670	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.27	-	-	MlaE
BYD3_k127_8319197_38	929556.Solca_4051	5.126e-50	184.0	COG5478@1|root,COG5478@2|Bacteria,4NQU8@976|Bacteroidetes,1J0FM@117747|Sphingobacteriia	976|Bacteroidetes	S	PFAM Low affinity iron permease	-	-	-	-	-	-	-	-	-	-	-	-	Iron_permease
BYD3_k127_8319197_18	700598.Niako_5849	2.027e-136	442.0	COG3569@1|root,COG3569@2|Bacteria,4NGTF@976|Bacteroidetes,1IPJC@117747|Sphingobacteriia	976|Bacteroidetes	L	PFAM Eukaryotic DNA topoisomerase I, catalytic core	-	-	5.99.1.2	ko:K03168	-	-	-	-	ko00000,ko01000,ko03032,ko03400	-	-	-	Topoisom_I
BYD3_k127_8319197_50	1123248.KB893322_gene680	2.71e-25	108.0	2EB74@1|root,3357R@2|Bacteria,4NVS4@976|Bacteroidetes	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_8319197_41	362418.IW19_01880	5.96e-44	166.0	COG3685@1|root,COG3685@2|Bacteria,4NMCT@976|Bacteroidetes,1I1BM@117743|Flavobacteriia,2NUHM@237|Flavobacterium	976|Bacteroidetes	S	Domain of unknown function (DUF892)	-	-	-	-	-	-	-	-	-	-	-	-	DUF892
BYD3_k127_8319197_23	485918.Cpin_0994	3.952e-108	357.0	COG1028@1|root,COG1028@2|Bacteria,4NFK6@976|Bacteroidetes,1IQDY@117747|Sphingobacteriia	976|Bacteroidetes	IQ	PFAM Short-chain dehydrogenase reductase SDR	-	-	-	-	-	-	-	-	-	-	-	-	adh_short_C2
BYD3_k127_8319197_44	1123248.KB893322_gene676	1.019e-34	138.0	COG3871@1|root,COG3871@2|Bacteria,4NNGC@976|Bacteroidetes,1IT18@117747|Sphingobacteriia	976|Bacteroidetes	S	Pyridoxamine 5'-phosphate oxidase like	-	-	-	-	-	-	-	-	-	-	-	-	Pyrid_ox_like
BYD3_k127_8319197_20	509635.N824_11870	3.093e-129	424.0	COG0665@1|root,COG0665@2|Bacteria,4NFT6@976|Bacteroidetes,1IR0J@117747|Sphingobacteriia	976|Bacteroidetes	E	FAD dependent oxidoreductase	-	-	-	-	-	-	-	-	-	-	-	-	DAO
BYD3_k127_8319197_28	1237149.C900_05249	4.596e-82	280.0	COG2885@1|root,COG2885@2|Bacteria,4NEGF@976|Bacteroidetes,47PK1@768503|Cytophagia	976|Bacteroidetes	M	Belongs to the ompA family	-	-	-	-	-	-	-	-	-	-	-	-	Gly-zipper_Omp,OmpA,PD40
BYD3_k127_8319197_51	497964.CfE428DRAFT_3996	3.503e-24	102.0	COG3237@1|root,COG3237@2|Bacteria	2|Bacteria	K	CsbD-like	yjbJ	GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464	-	-	-	-	-	-	-	-	-	-	CsbD
BYD3_k127_8319197_65	1121288.AULL01000019_gene1438	3.188e-06	52.0	COG4980@1|root,COG4980@2|Bacteria,4NSS8@976|Bacteroidetes,1I49S@117743|Flavobacteriia,3ZS05@59732|Chryseobacterium	976|Bacteroidetes	S	Gas vesicle protein	-	-	-	-	-	-	-	-	-	-	-	-	YtxH
BYD3_k127_8319197_57	1237149.C900_02112	6.917e-15	81.0	COG5502@1|root,COG5502@2|Bacteria	2|Bacteria	V	conserved protein (DUF2267)	-	-	2.1.1.72	ko:K03427,ko:K06910,ko:K07005	-	-	-	-	ko00000,ko01000,ko02048	-	-	-	DUF2267
BYD3_k127_8319197_55	376686.Fjoh_4310	1.198e-15	78.0	COG5487@1|root,COG5487@2|Bacteria,4NXPG@976|Bacteroidetes,1I674@117743|Flavobacteriia,2P09U@237|Flavobacterium	976|Bacteroidetes	S	Protein of unknown function (DUF1328)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1328
BYD3_k127_8319197_3	1237149.C900_05247	7.249e-307	1000.0	COG2911@1|root,COG2911@2|Bacteria,4NF7F@976|Bacteroidetes,47JE0@768503|Cytophagia	976|Bacteroidetes	M	PFAM Family of	-	-	-	-	-	-	-	-	-	-	-	-	TamB
BYD3_k127_8319197_5	1237149.C900_05248	1.211e-222	717.0	COG4775@1|root,COG4775@2|Bacteria,4NE80@976|Bacteroidetes,47KRB@768503|Cytophagia	976|Bacteroidetes	M	Outer membrane protein protective antigen OMA87	-	-	-	-	-	-	-	-	-	-	-	-	Bac_surface_Ag
BYD3_k127_8319197_43	1121895.Q765_18215	4.713e-35	142.0	COG2197@1|root,COG2197@2|Bacteria	2|Bacteria	K	response regulator	-	-	-	ko:K03413	ko02020,ko02030,map02020,map02030	M00506	-	-	ko00000,ko00001,ko00002,ko02022,ko02035	-	-	-	HATPase_c,HisKA,Response_reg
BYD3_k127_8319197_52	203124.Tery_2950	2.407e-23	112.0	COG1216@1|root,COG1216@2|Bacteria,1G4RU@1117|Cyanobacteria,1HH4K@1150|Oscillatoriales	1117|Cyanobacteria	S	glycosyl transferase family 2	-	-	-	-	-	-	-	-	-	-	-	-	Glycos_transf_2
BYD3_k127_8319197_12	1120968.AUBX01000011_gene3193	4.857e-167	538.0	COG5000@1|root,COG5000@2|Bacteria,4NFFM@976|Bacteroidetes,47MZF@768503|Cytophagia	976|Bacteroidetes	T	His Kinase A (phosphoacceptor) domain	-	-	-	-	-	-	-	-	-	-	-	-	HATPase_c,HisKA,PAS,PAS_9,Response_reg
BYD3_k127_8319197_19	1120965.AUBV01000003_gene501	1.271e-133	453.0	COG4251@1|root,COG4251@2|Bacteria,4NGXA@976|Bacteroidetes,47NUK@768503|Cytophagia	976|Bacteroidetes	T	signal transduction histidine kinase	-	-	-	-	-	-	-	-	-	-	-	-	CHASE3,HATPase_c,HisKA,PAS_3,PAS_4,PAS_8,PAS_9
BYD3_k127_8319197_34	1237149.C900_00553	4.659e-61	217.0	COG3637@1|root,COG3637@2|Bacteria,4NN3F@976|Bacteroidetes,47XR1@768503|Cytophagia	976|Bacteroidetes	M	Outer membrane protein beta-barrel domain	-	-	-	-	-	-	-	-	-	-	-	-	OMP_b-brl,OMP_b-brl_2
BYD3_k127_8319197_7	1120968.AUBX01000011_gene3190	9.059e-191	605.0	COG2204@1|root,COG2204@2|Bacteria,4NE89@976|Bacteroidetes,47N6B@768503|Cytophagia	976|Bacteroidetes	T	two component, sigma54 specific, transcriptional regulator, Fis family	-	-	-	ko:K07713	ko02020,map02020	M00499	-	-	ko00000,ko00001,ko00002,ko02022	-	-	-	HTH_8,Response_reg,Sigma54_activat
BYD3_k127_8319197_48	1237149.C900_05338	1.708e-29	121.0	COG0745@1|root,COG0745@2|Bacteria,4NTZU@976|Bacteroidetes,47R2J@768503|Cytophagia	976|Bacteroidetes	KT	Response regulator receiver domain	-	-	-	-	-	-	-	-	-	-	-	-	Response_reg
BYD3_k127_8319197_58	1144313.PMI10_04255	3.301e-14	73.0	2EFZF@1|root,339RM@2|Bacteria,4NXMV@976|Bacteroidetes,1IDAM@117743|Flavobacteriia,2NXW9@237|Flavobacterium	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	TspO_MBR
BYD3_k127_8319197_37	1237149.C900_05332	3.326e-51	201.0	2C5U1@1|root,2Z80K@2|Bacteria,4NG4G@976|Bacteroidetes,47RZF@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	DUF748
BYD3_k127_8319197_21	1237149.C900_05329	2.465e-119	395.0	COG2982@1|root,COG2982@2|Bacteria,4NIE2@976|Bacteroidetes,47M87@768503|Cytophagia	976|Bacteroidetes	M	Domain of Unknown Function (DUF748)	-	-	-	-	-	-	-	-	-	-	-	-	DUF748
BYD3_k127_8319197_25	1237149.C900_05328	1.618e-102	343.0	COG1295@1|root,COG1295@2|Bacteria,4NFG8@976|Bacteroidetes,47MBC@768503|Cytophagia	976|Bacteroidetes	S	Virulence factor BrkB	-	-	-	ko:K07058	-	-	-	-	ko00000	-	-	-	Virul_fac_BrkB
BYD3_k127_8319197_29	1121481.AUAS01000018_gene434	5.735e-81	282.0	COG0628@1|root,COG0628@2|Bacteria,4NFHZ@976|Bacteroidetes,47KDN@768503|Cytophagia	976|Bacteroidetes	S	AI-2E family transporter	-	-	-	-	-	-	-	-	-	-	-	-	AI-2E_transport
BYD3_k127_8319197_62	761193.Runsl_1365	2.203e-07	57.0	292W4@1|root,2ZQDM@2|Bacteria,4P8PZ@976|Bacteroidetes	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_8319197_0	700598.Niako_3964	0.0	3344.0	COG0642@1|root,COG0745@1|root,COG0840@1|root,COG1511@1|root,COG2770@1|root,COG0745@2|Bacteria,COG0840@2|Bacteria,COG1511@2|Bacteria,COG2205@2|Bacteria,COG2770@2|Bacteria,4NH0W@976|Bacteroidetes,1IV53@117747|Sphingobacteriia	976|Bacteroidetes	T	GAF domain	-	-	-	ko:K03406	ko02020,ko02030,map02020,map02030	-	-	-	ko00000,ko00001,ko02035	-	-	-	GAF_2,HAMP,HATPase_c,HisKA,MCPsignal,PAS_4,PAS_9,Response_reg
BYD3_k127_8319197_11	700598.Niako_3963	2.236e-167	534.0	COG3437@1|root,COG4251@1|root,COG3437@2|Bacteria,COG4251@2|Bacteria,4NMAR@976|Bacteroidetes,1IX9J@117747|Sphingobacteriia	976|Bacteroidetes	T	His Kinase A (phosphoacceptor) domain	-	-	-	-	-	-	-	-	-	-	-	-	HATPase_c,HisKA,Response_reg
BYD3_k127_8319197_49	1121373.KB903627_gene2953	5.325e-26	111.0	COG0745@1|root,COG0745@2|Bacteria,4NXE8@976|Bacteroidetes,47RYQ@768503|Cytophagia	976|Bacteroidetes	T	cheY-homologous receiver domain	-	-	-	-	-	-	-	-	-	-	-	-	Response_reg
BYD3_k127_8319197_40	420324.KI911943_gene5229	7.063e-45	174.0	COG2823@1|root,COG2823@2|Bacteria,1N1R4@1224|Proteobacteria,2UDII@28211|Alphaproteobacteria	1224|Proteobacteria	S	periplasmic or secreted lipoprotein	-	-	-	-	-	-	-	-	-	-	-	-	BON
BYD3_k127_8319197_8	926549.KI421517_gene1008	4.661e-178	588.0	COG1629@1|root,COG1629@2|Bacteria,4PKVH@976|Bacteroidetes,47K3W@768503|Cytophagia	976|Bacteroidetes	P	PFAM TonB-dependent Receptor Plug	-	-	-	-	-	-	-	-	-	-	-	-	CarbopepD_reg_2,CarboxypepD_reg,Plug
BYD3_k127_8319197_36	153721.MYP_2542	6.984e-55	204.0	COG3712@1|root,COG3712@2|Bacteria,4NKN5@976|Bacteroidetes,47XJ3@768503|Cytophagia	976|Bacteroidetes	PT	Domain of unknown function (DUF4974)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4880,DUF4974,FecR
BYD3_k127_8319197_46	880071.Fleli_2091	5.533e-32	132.0	COG1595@1|root,COG1595@2|Bacteria,4NNBY@976|Bacteroidetes,47PH5@768503|Cytophagia	976|Bacteroidetes	K	RNA polymerase sigma factor, sigma-70 family	-	-	-	ko:K03088	-	-	-	-	ko00000,ko03021	-	-	-	Sigma70_r2,Sigma70_r4_2
BYD3_k127_8319197_2	1191523.MROS_2496	0.0	1035.0	COG3661@1|root,COG3661@2|Bacteria	2|Bacteria	G	alpha-glucuronidase activity	aguA	GO:0000272,GO:0003674,GO:0003824,GO:0004553,GO:0005975,GO:0005976,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009987,GO:0010383,GO:0010410,GO:0010413,GO:0016052,GO:0016787,GO:0016798,GO:0033939,GO:0043170,GO:0044036,GO:0044237,GO:0044238,GO:0044260,GO:0045491,GO:0045493,GO:0071554,GO:0071704,GO:1901575,GO:2000886	3.2.1.139	ko:K01235	-	-	-	-	ko00000,ko01000	-	-	-	Glyco_hydro_67C,Glyco_hydro_67M,Glyco_hydro_67N
BYD3_k127_8319197_6	1122605.KB893626_gene2592	1.346e-197	621.0	COG1312@1|root,COG1312@2|Bacteria,4NFA5@976|Bacteroidetes,1IW5I@117747|Sphingobacteriia	976|Bacteroidetes	G	Catalyzes the dehydration of D-mannonate	uxuA	GO:0003674,GO:0003824,GO:0005488,GO:0005506,GO:0005975,GO:0005996,GO:0006063,GO:0006064,GO:0006082,GO:0008150,GO:0008152,GO:0008198,GO:0008927,GO:0009056,GO:0009987,GO:0016052,GO:0016054,GO:0016829,GO:0016835,GO:0016836,GO:0019585,GO:0019752,GO:0030145,GO:0032787,GO:0042839,GO:0042840,GO:0043167,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044281,GO:0044282,GO:0046365,GO:0046395,GO:0046872,GO:0046914,GO:0071704,GO:0072329,GO:1901575	4.2.1.8	ko:K01686	ko00040,ko01100,map00040,map01100	M00061	R05606	RC00543	ko00000,ko00001,ko00002,ko01000	-	-	-	UxuA
BYD3_k127_8319197_17	714943.Mucpa_3106	7.159e-138	445.0	COG1609@1|root,COG1609@2|Bacteria,4NDW6@976|Bacteroidetes,1INZB@117747|Sphingobacteriia	976|Bacteroidetes	K	PFAM periplasmic binding protein LacI transcriptional regulator	-	-	-	ko:K02529	-	-	-	-	ko00000,ko03000	-	-	-	LacI,Peripla_BP_1,Peripla_BP_3
BYD3_k127_8319197_32	1242864.D187_002120	5.032e-76	276.0	COG1073@1|root,COG1073@2|Bacteria	2|Bacteria	S	thiolester hydrolase activity	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_8319197_63	1123279.ATUS01000001_gene2003	8.44e-07	62.0	COG2010@1|root,COG3420@1|root,COG2010@2|Bacteria,COG3420@2|Bacteria,1QUPB@1224|Proteobacteria,1T2I7@1236|Gammaproteobacteria,1J4SI@118884|unclassified Gammaproteobacteria	1236|Gammaproteobacteria	C	COG3420 Nitrous oxidase accessory protein	-	-	-	-	-	-	-	-	-	-	-	-	Beta_helix,NosD
BYD3_k127_8319197_15	1408473.JHXO01000007_gene826	1.062e-150	499.0	COG0457@1|root,COG2207@1|root,COG5616@1|root,COG0457@2|Bacteria,COG2207@2|Bacteria,COG5616@2|Bacteria,4NFW7@976|Bacteroidetes	976|Bacteroidetes	K	COGs COG5616 integral membrane protein	-	-	-	-	-	-	-	-	-	-	-	-	HTH_18,TPR_8
BYD3_k127_8319197_35	700598.Niako_4883	5.805e-60	224.0	2C34F@1|root,2Z9Q8@2|Bacteria,4NGJP@976|Bacteroidetes,1IYWI@117747|Sphingobacteriia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_8319197_33	153721.MYP_2285	1.124e-63	226.0	2DKU7@1|root,30BG5@2|Bacteria,4NNSQ@976|Bacteroidetes,47PSB@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	DUF1080
BYD3_k127_8319197_22	761193.Runsl_0567	2.375e-108	358.0	COG2128@1|root,COG2128@2|Bacteria,4NHD5@976|Bacteroidetes,47M83@768503|Cytophagia	976|Bacteroidetes	S	Protein of unknown function (DUF3179)	-	-	-	-	-	-	-	-	-	-	-	-	DUF3179
BYD3_k127_8345393_4	362418.IW19_00560	2.896e-32	134.0	COG1595@1|root,COG1595@2|Bacteria,4NRYV@976|Bacteroidetes,1I2Z3@117743|Flavobacteriia,2NVPC@237|Flavobacterium	976|Bacteroidetes	K	Belongs to the sigma-70 factor family. ECF subfamily	-	-	-	ko:K03088	-	-	-	-	ko00000,ko03021	-	-	-	Sigma70_r2,Sigma70_r4_2
BYD3_k127_8345393_3	760192.Halhy_4820	2.418e-51	195.0	COG3712@1|root,COG3712@2|Bacteria,4NPYZ@976|Bacteroidetes,1IVEP@117747|Sphingobacteriia	976|Bacteroidetes	PT	COG3712 Fe2 -dicitrate sensor, membrane component	-	-	-	-	-	-	-	-	-	-	-	-	DUF4974,FecR
BYD3_k127_8345393_0	1123248.KB893321_gene472	0.0	1242.0	COG1629@1|root,COG4771@2|Bacteria,4NDU8@976|Bacteroidetes,1IUTQ@117747|Sphingobacteriia	976|Bacteroidetes	P	TonB dependent receptor	-	-	-	-	-	-	-	-	-	-	-	-	CarbopepD_reg_2,Plug,TonB_dep_Rec
BYD3_k127_8345393_2	1166018.FAES_2076	1.432e-199	634.0	COG4198@1|root,COG4198@2|Bacteria,4NI11@976|Bacteroidetes,47NFX@768503|Cytophagia	976|Bacteroidetes	S	Starch-binding associating with outer membrane	-	-	-	-	-	-	-	-	-	-	-	-	SusD-like
BYD3_k127_8345393_1	504472.Slin_3980	1.219e-234	743.0	COG4888@1|root,COG4888@2|Bacteria,4NEE8@976|Bacteroidetes,47KJ4@768503|Cytophagia	976|Bacteroidetes	S	ASPIC and UnbV	-	-	-	-	-	-	-	-	-	-	-	-	FG-GAP,UnbV_ASPIC,VCBS
BYD3_k127_8454288_19	1250232.JQNJ01000001_gene2168	1.149e-80	275.0	COG0526@1|root,COG1225@1|root,COG0526@2|Bacteria,COG1225@2|Bacteria,4NMEK@976|Bacteroidetes,1HYRW@117743|Flavobacteriia	976|Bacteroidetes	O	Redoxin	-	-	-	-	-	-	-	-	-	-	-	-	AhpC-TSA,Redoxin
BYD3_k127_8454288_8	1237149.C900_04399	2.362e-167	535.0	COG0501@1|root,COG0501@2|Bacteria,4NESF@976|Bacteroidetes,47KTS@768503|Cytophagia	976|Bacteroidetes	O	Zn-dependent protease with chaperone function	-	-	3.4.24.84	ko:K03799,ko:K06013	ko00900,ko01130,map00900,map01130	M00743	R09845	RC00141	ko00000,ko00001,ko00002,ko01000,ko01002,ko04147	-	-	-	Peptidase_M48,Peptidase_M48_N
BYD3_k127_8454288_24	1120965.AUBV01000008_gene2085	2.397e-61	214.0	COG0757@1|root,COG0757@2|Bacteria,4NNHU@976|Bacteroidetes,47PUX@768503|Cytophagia	976|Bacteroidetes	E	Catalyzes a trans-dehydration via an enolate intermediate	aroQ	-	4.2.1.10	ko:K03786	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	M00022	R03084	RC00848	ko00000,ko00001,ko00002,ko01000	-	-	-	DHquinase_II
BYD3_k127_8454288_10	1237149.C900_03773	6.583e-147	469.0	COG4974@1|root,COG4974@2|Bacteria,4NE0E@976|Bacteroidetes,47JU5@768503|Cytophagia	976|Bacteroidetes	D	Tyrosine recombinase XerC	xerC	-	-	ko:K04763	-	-	-	-	ko00000,ko03036	-	-	-	Phage_int_SAM_1,Phage_integrase
BYD3_k127_8454288_9	643867.Ftrac_1484	3.329e-149	479.0	COG0167@1|root,COG0167@2|Bacteria,4NDVB@976|Bacteroidetes,47KYQ@768503|Cytophagia	976|Bacteroidetes	F	Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor	pyrD	-	1.3.5.2	ko:K00254	ko00240,ko01100,map00240,map01100	M00051	R01868	RC00051	ko00000,ko00001,ko00002,ko01000	-	-	-	DHO_dh
BYD3_k127_8454288_13	616991.JPOO01000001_gene3807	9.832e-142	469.0	COG0457@1|root,COG0457@2|Bacteria,4NH87@976|Bacteroidetes,1HZMD@117743|Flavobacteriia,23FU8@178469|Arenibacter	976|Bacteroidetes	S	Tetratricopeptide repeat	-	-	-	-	-	-	-	-	-	-	-	-	TPR_8
BYD3_k127_8454288_3	880070.Cycma_2018	1.369e-310	971.0	COG1674@1|root,COG1674@2|Bacteria,4NE86@976|Bacteroidetes,47JI0@768503|Cytophagia	976|Bacteroidetes	D	DNA segregation ATPase FtsK SpoIIIE	ftsK	-	-	ko:K03466	-	-	-	-	ko00000,ko03036	3.A.12	-	-	FtsK_4TM,FtsK_SpoIIIE,Ftsk_gamma
BYD3_k127_8454288_23	1237149.C900_03780	4.326e-66	231.0	COG2834@1|root,COG2834@2|Bacteria,4NFGN@976|Bacteroidetes,47PRT@768503|Cytophagia	976|Bacteroidetes	M	PFAM Outer membrane lipoprotein carrier protein LolA	lolA	-	-	ko:K03634	-	-	-	-	ko00000	-	-	-	LolA,LolA_2
BYD3_k127_8454288_15	153721.MYP_268	5.784e-114	373.0	COG0284@1|root,COG0284@2|Bacteria,4NE12@976|Bacteroidetes,47JHC@768503|Cytophagia	976|Bacteroidetes	F	Orotidine 5''-phosphate decarboxylase	pyrF	GO:0003674,GO:0003824,GO:0004590,GO:0006139,GO:0006206,GO:0006207,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009112,GO:0009987,GO:0016829,GO:0016830,GO:0016831,GO:0018130,GO:0019856,GO:0034641,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046112,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576	4.1.1.23	ko:K01591	ko00240,ko01100,map00240,map01100	M00051	R00965	RC00409	ko00000,ko00001,ko00002,ko01000	-	-	-	OMPdecase
BYD3_k127_8454288_14	1237149.C900_03782	1.578e-139	455.0	28HQ3@1|root,2Z7XW@2|Bacteria,4NF9H@976|Bacteroidetes,47KPJ@768503|Cytophagia	976|Bacteroidetes	S	Protein of unknown function (DUF2851)	-	-	-	-	-	-	-	-	-	-	-	-	DUF2851
BYD3_k127_8454288_20	1237149.C900_03783	3.938e-77	274.0	28ICP@1|root,32QUE@2|Bacteria,4NR8Q@976|Bacteroidetes,47QZP@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_8454288_21	1237149.C900_03784	8.899e-75	257.0	COG0110@1|root,COG0110@2|Bacteria,4NNTF@976|Bacteroidetes,47PJQ@768503|Cytophagia	976|Bacteroidetes	S	sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family	-	-	-	-	-	-	-	-	-	-	-	-	Hexapep,Hexapep_2
BYD3_k127_8454288_16	1237149.C900_03785	1.83e-108	358.0	COG2820@1|root,COG2820@2|Bacteria,4NG5S@976|Bacteroidetes,47K9N@768503|Cytophagia	976|Bacteroidetes	F	PFAM Phosphorylase superfamily	udp	-	2.4.2.3	ko:K00757	ko00240,ko00983,ko01100,map00240,map00983,map01100	-	R01876,R02484,R08229	RC00063	ko00000,ko00001,ko01000	-	-	-	PNP_UDP_1
BYD3_k127_8454288_11	1237149.C900_03787	5.324e-144	467.0	COG0612@1|root,COG0612@2|Bacteria,4NEE4@976|Bacteroidetes,47JFQ@768503|Cytophagia	976|Bacteroidetes	S	PFAM Peptidase M16 inactive domain	-	-	-	-	-	-	-	-	-	-	-	-	Peptidase_M16,Peptidase_M16_C
BYD3_k127_8454288_18	1237149.C900_03788	6.821e-86	289.0	COG4122@1|root,COG4122@2|Bacteria,4NH42@976|Bacteroidetes,47KAK@768503|Cytophagia	976|Bacteroidetes	S	PFAM O-methyltransferase	mdmC	-	2.1.1.104	ko:K00588	ko00360,ko00940,ko00941,ko00945,ko01100,ko01110,map00360,map00940,map00941,map00945,map01100,map01110	M00039,M00350	R01942,R06578	RC00003,RC00392	ko00000,ko00001,ko00002,ko01000	-	-	-	Methyltransf_3
BYD3_k127_8454288_12	1237149.C900_03789	9.998e-144	476.0	COG0741@1|root,COG1388@1|root,COG0741@2|Bacteria,COG1388@2|Bacteria,4NHG0@976|Bacteroidetes,47JZ1@768503|Cytophagia	976|Bacteroidetes	M	PFAM Transglycosylase SLT domain	-	-	-	ko:K08307	-	-	-	-	ko00000,ko01000,ko01011	-	-	-	LysM,SLT
BYD3_k127_8454288_22	1237149.C900_03791	8.505e-68	232.0	COG2199@1|root,COG3706@2|Bacteria,4PKDN@976|Bacteroidetes,47QRP@768503|Cytophagia	976|Bacteroidetes	T	cheY-homologous receiver domain	-	-	-	-	-	-	-	-	-	-	-	-	Response_reg
BYD3_k127_8454288_17	1237149.C900_03792	9.886e-98	328.0	COG3137@1|root,COG3137@2|Bacteria,4NGB2@976|Bacteroidetes,47NWC@768503|Cytophagia	976|Bacteroidetes	M	Protein of unknown function (DUF3078)	-	-	-	-	-	-	-	-	-	-	-	-	DUF3078
BYD3_k127_8454288_4	1434325.AZQN01000003_gene2492	2.072e-224	705.0	COG0433@1|root,COG0433@2|Bacteria,4NF3P@976|Bacteroidetes,47M2I@768503|Cytophagia	976|Bacteroidetes	S	Bacterial protein of unknown function (DUF853)	-	-	-	ko:K06915	-	-	-	-	ko00000	-	-	-	DUF853
BYD3_k127_8454288_27	1237149.C900_01251	7.101e-23	107.0	COG3170@1|root,COG3170@2|Bacteria,4PNNG@976|Bacteroidetes,47SUJ@768503|Cytophagia	976|Bacteroidetes	NU	Tfp pilus assembly protein FimV	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_8454288_6	1237149.C900_01252	1.697e-183	580.0	COG2812@1|root,COG2812@2|Bacteria,4NE8A@976|Bacteroidetes,47KSQ@768503|Cytophagia	976|Bacteroidetes	L	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity	dnaX	-	2.7.7.7	ko:K02343	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	M00260	R00375,R00376,R00377,R00378	RC02795	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	-	-	-	DNA_pol3_delta2,DNA_pol3_gamma3
BYD3_k127_8454288_30	1121481.AUAS01000042_gene5327	5.571e-05	47.0	COG2003@1|root,COG2003@2|Bacteria,4NRCM@976|Bacteroidetes,47RDG@768503|Cytophagia	976|Bacteroidetes	L	DNA repair protein	-	-	-	ko:K03630	-	-	-	-	ko00000	-	-	-	RadC
BYD3_k127_8454288_29	388413.ALPR1_14514	2.126e-08	63.0	COG1309@1|root,COG1309@2|Bacteria,4NFR4@976|Bacteroidetes,47RPA@768503|Cytophagia	976|Bacteroidetes	K	Bacterial regulatory proteins, tetR family	-	-	-	-	-	-	-	-	-	-	-	-	TetR_C_10,TetR_N
BYD3_k127_8454288_0	1123248.KB893370_gene5133	0.0	1311.0	COG4888@1|root,COG4888@2|Bacteria,4NEE8@976|Bacteroidetes,1IP40@117747|Sphingobacteriia	976|Bacteroidetes	S	SPTR ASPIC UnbV domain protein	-	-	-	-	-	-	-	-	-	-	-	-	UnbV_ASPIC,VCBS
BYD3_k127_8454288_1	926549.KI421517_gene698	0.0	1195.0	COG4888@1|root,COG4888@2|Bacteria,4NEE8@976|Bacteroidetes,47JJ5@768503|Cytophagia	976|Bacteroidetes	S	ASPIC and UnbV	-	-	-	-	-	-	-	-	-	-	-	-	UnbV_ASPIC,VCBS
BYD3_k127_8454288_5	143224.JQMD01000002_gene2803	1.933e-191	610.0	COG0702@1|root,COG0702@2|Bacteria,4PKHQ@976|Bacteroidetes,1IJ9C@117743|Flavobacteriia	976|Bacteroidetes	GM	SusD family	-	-	-	ko:K21572	-	-	-	-	ko00000,ko02000	8.A.46.1,8.A.46.3	-	-	SusD-like_3,SusD_RagB
BYD3_k127_8454288_2	143224.JQMD01000002_gene2804	0.0	1159.0	COG1629@1|root,COG1629@2|Bacteria,4NDXS@976|Bacteroidetes,1HWYV@117743|Flavobacteriia	976|Bacteroidetes	P	TonB-dependent receptor plug	-	-	-	-	-	-	-	-	-	-	-	-	CarbopepD_reg_2,Plug,TonB_dep_Rec
BYD3_k127_8454288_25	760192.Halhy_6794	2.119e-57	213.0	COG3712@1|root,COG3712@2|Bacteria,4NH3M@976|Bacteroidetes,1ISNP@117747|Sphingobacteriia	976|Bacteroidetes	PT	COG3712 Fe2 -dicitrate sensor, membrane component	-	-	-	-	-	-	-	-	-	-	-	-	DUF4974,FecR
BYD3_k127_8454288_26	504472.Slin_4780	9.008e-40	154.0	COG1595@1|root,COG1595@2|Bacteria,4NSXH@976|Bacteroidetes,47RE2@768503|Cytophagia	976|Bacteroidetes	K	RNA polymerase sigma factor, sigma-70 family	-	-	-	ko:K03088	-	-	-	-	ko00000,ko03021	-	-	-	Sigma70_r2,Sigma70_r4_2
BYD3_k127_8454288_7	880070.Cycma_1980	3.669e-170	550.0	COG2010@1|root,COG2133@1|root,COG2010@2|Bacteria,COG2133@2|Bacteria,4NDV1@976|Bacteroidetes,47JGM@768503|Cytophagia	976|Bacteroidetes	G	COGs COG2133 Glucose sorbosone dehydrogenase	-	-	-	-	-	-	-	-	-	-	-	-	Cytochrome_CBB3,GSDH
BYD3_k127_8496077_0	1121904.ARBP01000014_gene133	3.951e-266	836.0	COG0551@1|root,COG2010@1|root,COG0551@2|Bacteria,COG2010@2|Bacteria,4NI4S@976|Bacteroidetes,47M53@768503|Cytophagia	976|Bacteroidetes	CL	Protein of unknown function (DUF1595)	-	-	-	-	-	-	-	-	-	-	-	-	PSCyt3,PSD2,PSD3,PSD4,PSD5
BYD3_k127_8496077_2	1121904.ARBP01000014_gene134	4.477e-216	678.0	COG2960@1|root,COG2960@2|Bacteria,4NFIK@976|Bacteroidetes,47N49@768503|Cytophagia	976|Bacteroidetes	S	Protein of unknown function (DUF1552)	-	-	-	-	-	-	-	-	-	-	-	-	HXXSHH
BYD3_k127_8496077_5	1121904.ARBP01000014_gene136	8.027e-136	447.0	COG4244@1|root,COG4886@1|root,COG4244@2|Bacteria,COG4886@2|Bacteria,4NK9B@976|Bacteroidetes,47MQB@768503|Cytophagia	976|Bacteroidetes	S	Planctomycete cytochrome C	-	-	-	-	-	-	-	-	-	-	-	-	PSCyt1
BYD3_k127_8496077_7	1124780.ANNU01000075_gene835	1.543e-116	386.0	COG0438@1|root,COG0438@2|Bacteria,4NETA@976|Bacteroidetes,47MBB@768503|Cytophagia	976|Bacteroidetes	M	PFAM Glycosyl transferases group 1	-	-	-	-	-	-	-	-	-	-	-	-	Glyco_transf_4,Glycos_transf_1
BYD3_k127_8496077_10	906888.JCM19314_1965	6.257e-70	241.0	COG0221@1|root,COG0221@2|Bacteria,4NGBU@976|Bacteroidetes,1HX3R@117743|Flavobacteriia,3HJJI@363408|Nonlabens	976|Bacteroidetes	C	Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions	ppa	-	3.6.1.1	ko:K01507	ko00190,map00190	-	-	-	ko00000,ko00001,ko01000	-	-	-	Pyrophosphatase
BYD3_k127_8496077_3	1237149.C900_04333	1.542e-158	512.0	COG0845@1|root,COG0845@2|Bacteria,4NFT4@976|Bacteroidetes,47JF4@768503|Cytophagia	976|Bacteroidetes	M	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family	-	-	-	ko:K02005	-	-	-	-	ko00000	-	-	-	Biotin_lipoyl_2,HlyD_D23,OEP
BYD3_k127_8496077_8	1237149.C900_04332	4.677e-116	391.0	COG1538@1|root,COG1538@2|Bacteria,4NEEN@976|Bacteroidetes,47M95@768503|Cytophagia	976|Bacteroidetes	MU	PFAM Outer membrane efflux protein	-	-	-	ko:K12340	ko01501,ko01503,ko02020,ko03070,ko04626,ko05133,map01501,map01503,map02020,map03070,map04626,map05133	M00325,M00326,M00339,M00571,M00575,M00646,M00647,M00696,M00697,M00709,M00720,M00821	-	-	ko00000,ko00001,ko00002,ko01504,ko02000,ko02044	1.B.17,2.A.6.2	-	-	OEP
BYD3_k127_8496077_4	1237149.C900_04328	3.309e-143	456.0	COG0207@1|root,COG0207@2|Bacteria,4NEC2@976|Bacteroidetes,47KE8@768503|Cytophagia	976|Bacteroidetes	F	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis	thyA	-	2.1.1.45	ko:K00560	ko00240,ko00670,ko01100,ko01523,map00240,map00670,map01100,map01523	M00053	R02101	RC00219,RC00332	ko00000,ko00001,ko00002,ko01000	-	-	-	Thymidylat_synt
BYD3_k127_8496077_11	1279009.ADICEAN_01481	3.812e-35	145.0	28M3Z@1|root,32ZEY@2|Bacteria,4NUZS@976|Bacteroidetes,47SGM@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_8496077_9	1237149.C900_00456	9.492e-108	352.0	COG1657@1|root,COG1657@2|Bacteria,4NFMT@976|Bacteroidetes,47KEV@768503|Cytophagia	976|Bacteroidetes	I	Domain of unknown function (DUF4159)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4159
BYD3_k127_8496077_6	1185876.BN8_00223	9.295e-124	413.0	COG4636@1|root,COG4636@2|Bacteria,4NFKR@976|Bacteroidetes,47K44@768503|Cytophagia	976|Bacteroidetes	S	Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella	-	-	-	-	-	-	-	-	-	-	-	-	VCBS
BYD3_k127_8496077_1	1237149.C900_03432	5.759e-262	871.0	COG3291@1|root,COG3291@2|Bacteria,4NJU9@976|Bacteroidetes,47NEJ@768503|Cytophagia	976|Bacteroidetes	Q	cell adhesion involved in biofilm formation	-	-	-	-	-	-	-	-	-	-	-	-	Big_5,PKD
BYD3_k127_8496077_13	1121890.AUDO01000028_gene1152	1.583e-11	79.0	COG2373@1|root,COG3210@1|root,COG2373@2|Bacteria,COG3210@2|Bacteria,4NJW6@976|Bacteroidetes,1IJTI@117743|Flavobacteriia	976|Bacteroidetes	U	Domain of unknown function DUF11	-	-	-	-	-	-	-	-	-	-	-	-	DUF11
BYD3_k127_8496077_12	485918.Cpin_4166	9.287e-20	107.0	COG2304@1|root,COG3291@1|root,COG3386@1|root,COG2304@2|Bacteria,COG3291@2|Bacteria,COG3386@2|Bacteria,4NDZC@976|Bacteroidetes	976|Bacteroidetes	DZ	Pkd domain containing protein	-	-	-	-	-	-	-	-	-	-	-	-	CHU_C,DUF11
BYD3_k127_8546159_0	1123276.KB893275_gene2320	7.756e-118	393.0	COG0671@1|root,COG0671@2|Bacteria,4NF9W@976|Bacteroidetes,47M2K@768503|Cytophagia	976|Bacteroidetes	I	PFAM Phosphatidic acid phosphatase type 2 haloperoxidase	-	-	-	-	-	-	-	-	-	-	-	-	PAP2
BYD3_k127_8546159_2	1469557.JSWF01000030_gene3454	6.935e-05	45.0	COG0251@1|root,COG0251@2|Bacteria,4NPF9@976|Bacteroidetes,1I1J9@117743|Flavobacteriia	976|Bacteroidetes	J	endoribonuclease L-PSP	-	-	-	-	-	-	-	-	-	-	-	-	YjgF_endoribonc
BYD3_k127_8546159_1	1434325.AZQN01000001_gene14	1.506e-38	149.0	COG3669@1|root,COG3669@2|Bacteria,4NEDX@976|Bacteroidetes,47JNA@768503|Cytophagia	976|Bacteroidetes	G	Coagulation factor 5 8 type domain protein	-	-	3.2.1.51	ko:K01206	ko00511,map00511	-	-	-	ko00000,ko00001,ko01000,ko04147	-	GH29	-	Alpha_L_fucos,F5_F8_type_C
BYD3_k127_8550428_0	1121904.ARBP01000008_gene3401	5.321e-238	757.0	COG0577@1|root,COG0577@2|Bacteria,4NDUK@976|Bacteroidetes,47JJN@768503|Cytophagia	976|Bacteroidetes	V	FtsX-like permease family	-	-	-	-	-	-	-	-	-	-	-	-	FtsX,MacB_PCD
BYD3_k127_8550428_3	525904.Tter_2860	6.933e-62	224.0	COG0346@1|root,COG0346@2|Bacteria,2NR21@2323|unclassified Bacteria	2|Bacteria	E	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily	-	-	3.2.2.1	ko:K01239	ko00230,ko00760,ko01100,map00230,map00760,map01100	-	R01245,R01273,R01677,R01770,R02143	RC00033,RC00063,RC00122,RC00318,RC00485	ko00000,ko00001,ko01000	-	-	-	Glyoxalase,Glyoxalase_4,IU_nuc_hydro
BYD3_k127_8550428_4	1068980.ARVW01000001_gene4419	1.065e-49	189.0	COG0346@1|root,COG0346@2|Bacteria,2IFKS@201174|Actinobacteria,4E5EV@85010|Pseudonocardiales	201174|Actinobacteria	E	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily	-	-	-	-	-	-	-	-	-	-	-	-	Glyoxalase_4
BYD3_k127_8550428_2	509635.N824_16360	2.065e-71	242.0	COG5646@1|root,COG5646@2|Bacteria,4NW3X@976|Bacteroidetes,1IZMU@117747|Sphingobacteriia	976|Bacteroidetes	S	Domain of unknown function (DU1801)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1801
BYD3_k127_8550428_1	1185876.BN8_06484	3.055e-163	522.0	COG3391@1|root,COG3391@2|Bacteria,4NHHU@976|Bacteroidetes,47P02@768503|Cytophagia	976|Bacteroidetes	S	amine dehydrogenase activity	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_8576908_39	1121904.ARBP01000012_gene1217	3.219e-39	148.0	COG3695@1|root,COG3695@2|Bacteria,4NQ34@976|Bacteroidetes,47R4H@768503|Cytophagia	976|Bacteroidetes	L	PFAM 6-O-methylguanine DNA methyltransferase, DNA binding domain	ogt	-	2.1.1.63	ko:K00567,ko:K07443	-	-	-	-	ko00000,ko01000,ko03400	-	-	-	DNA_binding_1
BYD3_k127_8576908_7	153721.MYP_47	3.057e-194	617.0	COG0591@1|root,COG0591@2|Bacteria,4NEF3@976|Bacteroidetes,47KNW@768503|Cytophagia	976|Bacteroidetes	E	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family	-	-	-	-	-	-	-	-	-	-	-	-	SSF
BYD3_k127_8576908_41	1124780.ANNU01000042_gene620	2.29e-32	127.0	COG2127@1|root,COG2127@2|Bacteria,4NS8R@976|Bacteroidetes,47R8K@768503|Cytophagia	976|Bacteroidetes	S	PFAM ATP-dependent Clp protease adaptor protein ClpS	clpS	-	-	ko:K06891	-	-	-	-	ko00000	-	-	-	ClpS
BYD3_k127_8576908_25	504472.Slin_1600	3.848e-87	292.0	COG0353@1|root,COG0353@2|Bacteria,4NEWI@976|Bacteroidetes,47JZK@768503|Cytophagia	976|Bacteroidetes	L	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO	recR	-	-	ko:K06187	ko03440,map03440	-	-	-	ko00000,ko00001,ko03400	-	-	-	RecR,Toprim_4
BYD3_k127_8576908_6	1237149.C900_00995	1.205e-196	623.0	COG0436@1|root,COG0436@2|Bacteria,4NENS@976|Bacteroidetes,47JJH@768503|Cytophagia	976|Bacteroidetes	E	PFAM Aminotransferase class I and II	aspC	-	2.6.1.1	ko:K00812	ko00220,ko00250,ko00270,ko00330,ko00350,ko00360,ko00400,ko00401,ko00950,ko00960,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map00250,map00270,map00330,map00350,map00360,map00400,map00401,map00950,map00960,map01100,map01110,map01130,map01210,map01230	-	R00355,R00694,R00734,R00896,R02433,R02619,R05052	RC00006	ko00000,ko00001,ko01000,ko01007	-	-	-	Aminotran_1_2
BYD3_k127_8576908_13	1237149.C900_01000	1.234e-122	405.0	COG0308@1|root,COG0308@2|Bacteria,4PNPR@976|Bacteroidetes,47YF9@768503|Cytophagia	976|Bacteroidetes	E	CarboxypepD_reg-like domain	-	-	-	-	-	-	-	-	-	-	-	-	CarbopepD_reg_2
BYD3_k127_8576908_18	1237149.C900_01001	1.324e-111	372.0	COG2972@1|root,COG2972@2|Bacteria,4NIER@976|Bacteroidetes,47P26@768503|Cytophagia	976|Bacteroidetes	T	Histidine kinase	-	-	-	-	-	-	-	-	-	-	-	-	HATPase_c,His_kinase
BYD3_k127_8576908_16	1237149.C900_01002	2.254e-114	372.0	COG3279@1|root,COG3279@2|Bacteria,4NEAH@976|Bacteroidetes,47KUT@768503|Cytophagia	976|Bacteroidetes	KT	Response regulator of the LytR AlgR family	-	-	-	ko:K02477	-	-	-	-	ko00000,ko02022	-	-	-	LytTR,Response_reg
BYD3_k127_8576908_43	1519464.HY22_14065	3.113e-24	111.0	2DDRS@1|root,2ZJ0Y@2|Bacteria	2|Bacteria	S	Protein of unknown function (DUF4230)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4230
BYD3_k127_8576908_33	1237149.C900_01005	3.048e-55	211.0	COG0810@1|root,COG0810@2|Bacteria,4NSYT@976|Bacteroidetes,47W0H@768503|Cytophagia	976|Bacteroidetes	M	Gram-negative bacterial TonB protein C-terminal	-	-	-	-	-	-	-	-	-	-	-	-	CarbopepD_reg_2,TonB_C
BYD3_k127_8576908_32	1150600.ADIARSV_2408	1.108e-58	209.0	COG1595@1|root,COG1595@2|Bacteria,4NNEM@976|Bacteroidetes,1IRWR@117747|Sphingobacteriia	976|Bacteroidetes	K	Belongs to the sigma-70 factor family. ECF subfamily	-	-	-	ko:K03088	-	-	-	-	ko00000,ko03021	-	-	-	Sigma70_r2,Sigma70_r4_2
BYD3_k127_8576908_3	1237149.C900_01007	7.392e-259	810.0	COG2304@1|root,COG2304@2|Bacteria,4NFX3@976|Bacteroidetes,47KQ9@768503|Cytophagia	976|Bacteroidetes	S	von Willebrand factor, type A	-	-	-	ko:K07114	-	-	-	-	ko00000,ko02000	1.A.13.2.2,1.A.13.2.3	-	-	CarbopepD_reg_2,DUF3520,VWA,vWF_A
BYD3_k127_8576908_28	313606.M23134_08430	1.969e-72	252.0	COG0463@1|root,COG0463@2|Bacteria,4NGYU@976|Bacteroidetes,47XHY@768503|Cytophagia	976|Bacteroidetes	M	Glycosyl transferase family 2	-	-	-	ko:K12984	-	-	-	-	ko00000,ko01000,ko01003,ko01005,ko02000	4.D.1.3	GT2	-	Glycos_transf_2
BYD3_k127_8576908_20	1237149.C900_01010	7.993e-99	325.0	COG1595@1|root,COG1595@2|Bacteria,4NEFR@976|Bacteroidetes,47JFG@768503|Cytophagia	976|Bacteroidetes	K	Belongs to the sigma-70 factor family. ECF subfamily	-	-	-	ko:K03088	-	-	-	-	ko00000,ko03021	-	-	-	Sigma70_r2,Sigma70_r4_2
BYD3_k127_8576908_45	1279009.ADICEAN_00818	2.333e-14	76.0	2EK82@1|root,33DYE@2|Bacteria,4NYF0@976|Bacteroidetes,47SMK@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	zf-HC2
BYD3_k127_8576908_23	1048983.EL17_05200	2.142e-90	300.0	COG0194@1|root,COG0194@2|Bacteria,4NEDG@976|Bacteroidetes,47M4J@768503|Cytophagia	976|Bacteroidetes	F	Essential for recycling GMP and indirectly, cGMP	gmk	GO:0003674,GO:0003824,GO:0004385,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009126,GO:0009132,GO:0009135,GO:0009150,GO:0009161,GO:0009165,GO:0009167,GO:0009179,GO:0009185,GO:0009259,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0042278,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046037,GO:0046128,GO:0046483,GO:0046710,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0072521,GO:0090407,GO:1901068,GO:1901135,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901576,GO:1901657	2.7.4.8	ko:K00942	ko00230,ko01100,map00230,map01100	M00050	R00332,R02090	RC00002	ko00000,ko00001,ko00002,ko01000	-	-	-	Guanylate_kin
BYD3_k127_8576908_26	471854.Dfer_3826	5.558e-81	274.0	COG1057@1|root,COG1057@2|Bacteria,4NFQI@976|Bacteroidetes,47JKF@768503|Cytophagia	976|Bacteroidetes	H	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)	nadD	-	2.7.7.18	ko:K00969	ko00760,ko01100,map00760,map01100	M00115	R00137,R03005	RC00002	ko00000,ko00001,ko00002,ko01000	-	-	-	CTP_transf_like
BYD3_k127_8576908_2	1237149.C900_01015	3.334e-297	937.0	COG1470@1|root,COG1470@2|Bacteria,4NFPN@976|Bacteroidetes,47M4H@768503|Cytophagia	976|Bacteroidetes	S	CarboxypepD_reg-like domain	-	-	-	-	-	-	-	-	-	-	-	-	CarbopepD_reg_2
BYD3_k127_8576908_29	929703.KE386491_gene2299	4.113e-72	252.0	COG2520@1|root,COG2520@2|Bacteria,4NNG5@976|Bacteroidetes,47PX7@768503|Cytophagia	976|Bacteroidetes	J	Methyltransferase FkbM domain	-	-	-	-	-	-	-	-	-	-	-	-	Methyltransf_21
BYD3_k127_8576908_24	1124780.ANNU01000050_gene2107	7.886e-89	304.0	COG2603@1|root,COG2603@2|Bacteria,4NH7W@976|Bacteroidetes,47KFW@768503|Cytophagia	976|Bacteroidetes	S	Rhodanese Homology Domain	-	-	-	ko:K06917	-	-	-	-	ko00000,ko01000,ko03016	-	-	-	Rhodanese
BYD3_k127_8576908_14	1237149.C900_04921	4.829e-118	387.0	COG0741@1|root,COG0741@2|Bacteria,4NH4W@976|Bacteroidetes,47MKU@768503|Cytophagia	976|Bacteroidetes	M	Transglycosylase SLT domain	mltD_2	-	-	-	-	-	-	-	-	-	-	-	SLT
BYD3_k127_8576908_34	1237149.C900_04570	3.313e-52	185.0	COG0599@1|root,COG0599@2|Bacteria,4NNPC@976|Bacteroidetes,47QDA@768503|Cytophagia	976|Bacteroidetes	S	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity	-	-	-	-	-	-	-	-	-	-	-	-	CMD
BYD3_k127_8576908_12	1237149.C900_04571	7.135e-167	530.0	COG0535@1|root,COG0535@2|Bacteria,4NFRX@976|Bacteroidetes,47KUF@768503|Cytophagia	976|Bacteroidetes	S	Protein of unknown function (DUF3641)	-	-	-	-	-	-	-	-	-	-	-	-	DUF3641,Fer4_12,Radical_SAM
BYD3_k127_8576908_38	929703.KE386491_gene1033	4.755e-41	156.0	COG5485@1|root,COG5485@2|Bacteria,4NRQT@976|Bacteroidetes,47QG9@768503|Cytophagia	976|Bacteroidetes	S	SnoaL-like polyketide cyclase	-	-	-	-	-	-	-	-	-	-	-	-	SnoaL
BYD3_k127_8576908_37	1166018.FAES_0732	2.126e-46	175.0	2DBWU@1|root,2ZBJD@2|Bacteria,4PJR6@976|Bacteroidetes,47P9W@768503|Cytophagia	976|Bacteroidetes	S	Protein of unknown function (DUF664)	-	-	-	-	-	-	-	-	-	-	-	-	DinB_2
BYD3_k127_8576908_35	1123278.KB893572_gene2244	2.393e-51	191.0	COG2169@1|root,COG2169@2|Bacteria,4PNWY@976|Bacteroidetes,47KQ8@768503|Cytophagia	976|Bacteroidetes	K	Helix-turn-helix domain	-	-	-	-	-	-	-	-	-	-	-	-	HTH_18
BYD3_k127_8576908_17	1279009.ADICEAN_01420	5.977e-114	374.0	COG1402@1|root,COG1402@2|Bacteria,4NF2C@976|Bacteroidetes,47MQ8@768503|Cytophagia	976|Bacteroidetes	S	Creatinine amidohydrolase	crnA	-	3.5.2.10	ko:K01470	ko00330,map00330	-	R01884	RC00615	ko00000,ko00001,ko01000	-	-	-	Creatininase
BYD3_k127_8576908_42	688269.Theth_1685	3.961e-27	118.0	28JE3@1|root,2Z98B@2|Bacteria	2|Bacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	AbiEii
BYD3_k127_8576908_19	1237149.C900_03460	4.662e-105	347.0	COG1354@1|root,COG1354@2|Bacteria,4NJQE@976|Bacteroidetes,47MUR@768503|Cytophagia	976|Bacteroidetes	D	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves	scpA	-	-	ko:K05896	-	-	-	-	ko00000,ko03036	-	-	-	SMC_ScpA
BYD3_k127_8576908_0	1237149.C900_03459	0.0	1098.0	COG1154@1|root,COG1154@2|Bacteria,4NDY5@976|Bacteroidetes,47JUB@768503|Cytophagia	976|Bacteroidetes	H	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)	dxs	-	2.2.1.7	ko:K01662	ko00730,ko00900,ko01100,ko01110,ko01130,map00730,map00900,map01100,map01110,map01130	M00096	R05636	RC00032	ko00000,ko00001,ko00002,ko01000	-	-	-	DXP_synthase_N,E1_dh,Transket_pyr,Transketolase_C
BYD3_k127_8576908_31	1237149.C900_03458	1.509e-59	216.0	COG0596@1|root,COG0596@2|Bacteria,4PKUD@976|Bacteroidetes,47Y3M@768503|Cytophagia	976|Bacteroidetes	S	Alpha/beta hydrolase family	-	-	-	-	-	-	-	-	-	-	-	-	Abhydrolase_1,Abhydrolase_6
BYD3_k127_8576908_21	1237149.C900_01781	6.018e-97	323.0	COG1512@1|root,COG1512@2|Bacteria	2|Bacteria	S	TPM domain	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_8576908_44	1121904.ARBP01000003_gene6232	9.189e-23	102.0	2AMB7@1|root,31C6A@2|Bacteria,4NQ8I@976|Bacteroidetes,47Q46@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_8576908_22	269798.CHU_0815	6.923e-91	310.0	COG3081@1|root,COG3081@2|Bacteria,4NFSN@976|Bacteroidetes,47MMD@768503|Cytophagia	976|Bacteroidetes	S	37-kD nucleoid-associated bacterial protein	-	-	-	-	-	-	-	-	-	-	-	-	NA37
BYD3_k127_8576908_8	926549.KI421517_gene496	1.287e-181	578.0	COG0172@1|root,COG0172@2|Bacteria,4NED6@976|Bacteroidetes,47JAB@768503|Cytophagia	976|Bacteroidetes	J	tRNA synthetase class II core domain (G, H, P, S and T)	serS	-	6.1.1.11	ko:K01875	ko00970,map00970	M00359,M00360	R03662,R08218	RC00055,RC00523	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	-	-	-	Seryl_tRNA_N,tRNA-synt_2b
BYD3_k127_8576908_4	1237149.C900_03232	2.033e-243	760.0	COG1158@1|root,COG1158@2|Bacteria,4NEFP@976|Bacteroidetes,47JWD@768503|Cytophagia	976|Bacteroidetes	K	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template	rho	-	-	ko:K03628	ko03018,map03018	-	-	-	ko00000,ko00001,ko03019,ko03021	-	-	-	ATP-synt_ab,Rho_N,Rho_RNA_bind
BYD3_k127_8576908_10	1121904.ARBP01000028_gene1657	1.548e-174	570.0	COG2304@1|root,COG2304@2|Bacteria,4NER3@976|Bacteroidetes,47JA7@768503|Cytophagia	976|Bacteroidetes	S	oxidoreductase activity	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_8576908_5	1237149.C900_03862	4.637e-205	649.0	COG2256@1|root,COG2256@2|Bacteria,4NEV8@976|Bacteroidetes,47JM9@768503|Cytophagia	976|Bacteroidetes	L	PFAM MgsA AAA ATPase C terminal	ycaJ	-	-	ko:K07478	-	-	-	-	ko00000	-	-	-	AAA,AAA_assoc_2,MgsA_C,RuvB_N
BYD3_k127_8576908_40	485918.Cpin_1312	1.331e-34	145.0	COG1566@1|root,COG1566@2|Bacteria,4NN7U@976|Bacteroidetes,1IYEP@117747|Sphingobacteriia	976|Bacteroidetes	V	Protein of unknown function (DUF3667)	-	-	-	-	-	-	-	-	-	-	-	-	DUF3667
BYD3_k127_8576908_15	485918.Cpin_0657	1.66e-115	377.0	COG0345@1|root,COG0345@2|Bacteria,4NE6F@976|Bacteroidetes,1IR2E@117747|Sphingobacteriia	976|Bacteroidetes	E	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline	proC	-	1.5.1.2	ko:K00286	ko00330,ko01100,ko01110,ko01130,ko01230,map00330,map01100,map01110,map01130,map01230	M00015	R01248,R01251,R03291,R03293	RC00054,RC00083	ko00000,ko00001,ko00002,ko01000	-	-	-	F420_oxidored,P5CR_dimer
BYD3_k127_8576908_27	172045.KS04_02100	9.934e-73	250.0	COG2391@1|root,COG2391@2|Bacteria,4NM6E@976|Bacteroidetes,1I190@117743|Flavobacteriia,34PV2@308865|Elizabethkingia	976|Bacteroidetes	S	Sulphur transport	-	-	-	ko:K07112	-	-	-	-	ko00000	-	-	-	Sulf_transp
BYD3_k127_8576908_36	1189612.A33Q_3870	4.021e-47	176.0	COG2391@1|root,COG2391@2|Bacteria,4NQ9C@976|Bacteroidetes,47P92@768503|Cytophagia	976|Bacteroidetes	S	PFAM YeeE YedE family (DUF395)	-	-	-	ko:K07112	-	-	-	-	ko00000	-	-	-	Sulf_transp
BYD3_k127_8576908_11	1267211.KI669560_gene1776	8.113e-169	541.0	COG0534@1|root,COG0534@2|Bacteria,4NFIR@976|Bacteroidetes,1IXI6@117747|Sphingobacteriia	976|Bacteroidetes	V	MatE	-	-	-	-	-	-	-	-	-	-	-	-	MatE
BYD3_k127_8576908_30	313606.M23134_05330	7.159e-65	234.0	COG0823@1|root,COG0823@2|Bacteria,4PME8@976|Bacteroidetes,47Y2Q@768503|Cytophagia	976|Bacteroidetes	U	Involved in the tonB-independent uptake of proteins	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_8576908_9	1237149.C900_02057	3.27e-176	556.0	COG0564@1|root,COG0564@2|Bacteria,4NEV3@976|Bacteroidetes,47MPT@768503|Cytophagia	976|Bacteroidetes	J	Responsible for synthesis of pseudouridine from uracil	rluD	-	5.4.99.23	ko:K06180	-	-	-	-	ko00000,ko01000,ko03009	-	-	-	PseudoU_synth_2,S4
BYD3_k127_8576908_1	1123248.KB893325_gene1171	0.0	1030.0	COG1413@1|root,COG2133@1|root,COG1413@2|Bacteria,COG2133@2|Bacteria,4NHVG@976|Bacteroidetes,1IQPM@117747|Sphingobacteriia	976|Bacteroidetes	C	Membrane-bound dehydrogenase domain protein	-	-	-	-	-	-	-	-	-	-	-	-	Cytochrom_C,GSDH,HEAT_2
BYD3_k127_8576908_46	1237149.C900_00745	0.0002392	47.0	COG2982@1|root,COG2982@2|Bacteria,4NEJQ@976|Bacteroidetes,47KBD@768503|Cytophagia	976|Bacteroidetes	M	AsmA-like C-terminal region	-	-	-	-	-	-	-	-	-	-	-	-	AsmA,AsmA_2
BYD3_k127_857792_0	1237149.C900_04087	4.927e-244	778.0	COG0577@1|root,COG0577@2|Bacteria,4NDUK@976|Bacteroidetes	976|Bacteroidetes	V	permease	-	-	-	ko:K02004	-	M00258	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	FtsX,MacB_PCD
BYD3_k127_857792_1	1107311.Q767_03120	1.688e-116	385.0	COG1680@1|root,COG1680@2|Bacteria,4NFUI@976|Bacteroidetes,1HWMZ@117743|Flavobacteriia	976|Bacteroidetes	V	beta-lactamase	-	-	-	-	-	-	-	-	-	-	-	-	Beta-lactamase
BYD3_k127_857792_2	1121904.ARBP01000018_gene2659	1.372e-64	224.0	COG0454@1|root,COG0456@2|Bacteria,4PMBT@976|Bacteroidetes	976|Bacteroidetes	K	Acetyltransferase (GNAT) domain	-	-	-	-	-	-	-	-	-	-	-	-	Acetyltransf_1
BYD3_k127_857792_4	1123248.KB893315_gene3216	2.131e-08	62.0	2EQES@1|root,33I0R@2|Bacteria,4NY5D@976|Bacteroidetes,1IZVC@117747|Sphingobacteriia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_8595105_15	1123508.JH636439_gene1752	1.021e-98	333.0	COG0560@1|root,COG0560@2|Bacteria,2IXZ0@203682|Planctomycetes	203682|Planctomycetes	E	haloacid dehalogenase-like hydrolase	-	-	-	-	-	-	-	-	-	-	-	-	HAD
BYD3_k127_8595105_3	1120966.AUBU01000013_gene439	5.273e-289	894.0	COG3119@1|root,COG3119@2|Bacteria,4NFRB@976|Bacteroidetes	976|Bacteroidetes	P	Arylsulfatase	-	-	3.1.6.1	ko:K01130	ko00140,ko00600,map00140,map00600	-	R03980,R04856	RC00128,RC00231	ko00000,ko00001,ko01000	-	-	-	Sulfatase,Sulfatase_C
BYD3_k127_8595105_11	926549.KI421517_gene3186	5.475e-121	395.0	COG1082@1|root,COG1082@2|Bacteria,4NJS5@976|Bacteroidetes,47P1R@768503|Cytophagia	976|Bacteroidetes	G	Xylose isomerase-like TIM barrel	-	-	-	-	-	-	-	-	-	-	-	-	AP_endonuc_2
BYD3_k127_8595105_4	1123276.KB893246_gene733	1.901e-253	802.0	COG1413@1|root,COG2010@1|root,COG1413@2|Bacteria,COG2010@2|Bacteria,4NEZ5@976|Bacteroidetes,47JIJ@768503|Cytophagia	976|Bacteroidetes	C	Membrane-bound dehydrogenase domain protein	-	-	-	-	-	-	-	-	-	-	-	-	Cytochrom_C,Cytochrome_CBB3,F5_F8_type_C
BYD3_k127_8595105_13	485918.Cpin_6276	3.467e-110	370.0	COG3303@1|root,COG3303@2|Bacteria,4PKHF@976|Bacteroidetes,1J0P8@117747|Sphingobacteriia	976|Bacteroidetes	C	Cytochrome c554 and c-prime	-	-	-	-	-	-	-	-	-	-	-	-	Cytochrome_C554,Paired_CXXCH_1
BYD3_k127_8595105_23	1121481.AUAS01000002_gene3321	1.253e-36	142.0	COG0640@1|root,COG0640@2|Bacteria,4NSDX@976|Bacteroidetes,47R1P@768503|Cytophagia	976|Bacteroidetes	K	helix_turn_helix, Arsenical Resistance Operon Repressor	-	-	-	-	-	-	-	-	-	-	-	-	HTH_20,HTH_5
BYD3_k127_8595105_17	1443665.JACA01000013_gene4274	5.572e-80	268.0	COG3832@1|root,COG3832@2|Bacteria,4NR9F@976|Bacteroidetes,1IGFV@117743|Flavobacteriia,2YHDA@290174|Aquimarina	976|Bacteroidetes	S	Activator of Hsp90 ATPase homolog 1-like protein	-	-	-	-	-	-	-	-	-	-	-	-	AHSA1
BYD3_k127_8595105_14	1123073.KB899245_gene24	1.17e-108	361.0	COG0598@1|root,COG0598@2|Bacteria,1MX09@1224|Proteobacteria,1RZ95@1236|Gammaproteobacteria,1X3T7@135614|Xanthomonadales	135614|Xanthomonadales	P	transport protein	corA	-	-	ko:K03284	-	-	-	-	ko00000,ko02000	1.A.35.1,1.A.35.3	-	-	CorA
BYD3_k127_8595105_6	1123277.KB893208_gene2818	7.432e-164	518.0	COG0412@1|root,COG0412@2|Bacteria,4NEUX@976|Bacteroidetes,47JGG@768503|Cytophagia	976|Bacteroidetes	Q	dienelactone hydrolase	-	-	3.1.1.45	ko:K01061	ko00361,ko00364,ko00623,ko01100,ko01110,ko01120,ko01130,map00361,map00364,map00623,map01100,map01110,map01120,map01130	-	R03893,R05510,R05511,R06835,R06838,R08120,R08121,R09136,R09220,R09222	RC01018,RC01906,RC01907,RC02441,RC02467,RC02468,RC02674,RC02675,RC02686	ko00000,ko00001,ko01000	-	-	-	DLH
BYD3_k127_8595105_8	1185876.BN8_01621	1.079e-152	495.0	COG0671@1|root,COG0671@2|Bacteria,4NKIN@976|Bacteroidetes,47T9W@768503|Cytophagia	976|Bacteroidetes	I	PAP2 superfamily	-	-	-	-	-	-	-	-	-	-	-	-	PAP2
BYD3_k127_8595105_24	1185876.BN8_01620	1.504e-33	142.0	COG2207@1|root,COG2207@2|Bacteria,4NVK7@976|Bacteroidetes,47XDI@768503|Cytophagia	976|Bacteroidetes	K	helix_turn_helix, arabinose operon control protein	-	-	-	-	-	-	-	-	-	-	-	-	HTH_18
BYD3_k127_8595105_21	760192.Halhy_3569	5.493e-44	166.0	COG1595@1|root,COG1595@2|Bacteria,4NSXH@976|Bacteroidetes,1ITK2@117747|Sphingobacteriia	976|Bacteroidetes	K	PFAM RNA polymerase sigma factor 70, region 4 type 2	-	-	-	ko:K03088	-	-	-	-	ko00000,ko03021	-	-	-	Sigma70_r2,Sigma70_r4_2
BYD3_k127_8595105_20	471854.Dfer_3705	9.814e-62	226.0	COG3712@1|root,COG3712@2|Bacteria,4NNI5@976|Bacteroidetes,47Q6H@768503|Cytophagia	976|Bacteroidetes	PT	PFAM FecR protein	-	-	-	-	-	-	-	-	-	-	-	-	DUF4974,FecR
BYD3_k127_8595105_0	485918.Cpin_0633	0.0	1274.0	COG1629@1|root,COG1629@2|Bacteria,4NDXS@976|Bacteroidetes,1IQCW@117747|Sphingobacteriia	976|Bacteroidetes	P	PFAM TonB-dependent Receptor Plug	-	-	-	-	-	-	-	-	-	-	-	-	CarbopepD_reg_2,Plug,STN,TonB_dep_Rec
BYD3_k127_8595105_7	700598.Niako_4933	6.188e-159	516.0	COG0702@1|root,COG0702@2|Bacteria,4NHVQ@976|Bacteroidetes,1IQVG@117747|Sphingobacteriia	976|Bacteroidetes	GM	RagB SusD domain protein	-	-	-	ko:K21572	-	-	-	-	ko00000,ko02000	8.A.46.1,8.A.46.3	-	-	SusD-like_3,SusD_RagB
BYD3_k127_8595105_12	1123248.KB893348_gene96	8.353e-113	378.0	COG4299@1|root,COG4299@2|Bacteria,4NDZF@976|Bacteroidetes,1IQFR@117747|Sphingobacteriia	976|Bacteroidetes	S	Protein of unknown function (DUF1624)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1624,DUF5009
BYD3_k127_8595105_10	1185876.BN8_02220	1.455e-135	441.0	COG3325@1|root,COG3325@2|Bacteria,4NGAZ@976|Bacteroidetes,47JXX@768503|Cytophagia	976|Bacteroidetes	G	Glyco_18	-	-	3.2.1.14	ko:K01183	ko00520,ko01100,map00520,map01100	-	R01206,R02334	RC00467	ko00000,ko00001,ko01000	-	GH18	-	Glyco_hydro_18
BYD3_k127_8595105_9	1305737.JAFX01000001_gene661	1.049e-142	468.0	28HH2@1|root,2Z7ST@2|Bacteria,4NMWR@976|Bacteroidetes,47VP3@768503|Cytophagia	976|Bacteroidetes	M	Thiol-activated cytolysin	-	-	-	ko:K11031	ko02024,map02024	-	-	-	ko00000,ko00001,ko02042	-	-	-	Thiol_cytolysin
BYD3_k127_8595105_5	388413.ALPR1_15849	1.126e-204	666.0	COG0515@1|root,COG0515@2|Bacteria,4NPN9@976|Bacteroidetes,47PE8@768503|Cytophagia	976|Bacteroidetes	KLT	Protein tyrosine kinase	-	-	2.7.11.1	ko:K12132	-	-	-	-	ko00000,ko01000,ko01001	-	-	-	NERD,Pkinase,TPR_12,TPR_8
BYD3_k127_8595105_19	388413.ALPR1_15854	1.002e-65	229.0	COG1595@1|root,COG1595@2|Bacteria,4NSN4@976|Bacteroidetes,47RXQ@768503|Cytophagia	976|Bacteroidetes	K	ECF sigma factor	-	-	-	-	-	-	-	-	-	-	-	-	Sigma70_ECF
BYD3_k127_8595105_22	1121104.AQXH01000001_gene1479	2.064e-40	153.0	2EHC3@1|root,33B3Y@2|Bacteria,4NZPQ@976|Bacteroidetes	976|Bacteroidetes	S	Protein of unknown function (DUF1761)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1761
BYD3_k127_8595105_25	1408473.JHXO01000011_gene3125	1.148e-28	119.0	COG0745@1|root,COG3292@1|root,COG5002@1|root,COG0745@2|Bacteria,COG3292@2|Bacteria,COG5002@2|Bacteria,4NG0B@976|Bacteroidetes,2FM88@200643|Bacteroidia	976|Bacteroidetes	T	Response regulator receiver domain protein	-	-	-	-	-	-	-	-	-	-	-	-	HATPase_c,HTH_18,HisKA,Reg_prop,Response_reg,Y_Y_Y
BYD3_k127_8595105_18	1048983.EL17_08415	1.075e-66	242.0	28I9R@1|root,2Z8CE@2|Bacteria,4NE54@976|Bacteroidetes,47QI6@768503|Cytophagia	976|Bacteroidetes	S	Lipid A 3-O-deacylase (PagL)	-	-	-	-	-	-	-	-	-	-	-	-	PagL
BYD3_k127_8595105_2	1122176.KB903539_gene1316	0.0	1124.0	COG1529@1|root,COG1529@2|Bacteria,4NFFU@976|Bacteroidetes,1IPWF@117747|Sphingobacteriia	976|Bacteroidetes	C	COG1529 Aerobic-type carbon monoxide dehydrogenase large subunit CoxL CutL homologs	-	-	1.3.99.16	ko:K07303	-	-	-	-	ko00000,ko01000	-	-	-	Ald_Xan_dh_C2
BYD3_k127_8595105_1	1123248.KB893316_gene4674	0.0	1193.0	COG1529@1|root,COG1529@2|Bacteria,4NFFU@976|Bacteroidetes,1IPWF@117747|Sphingobacteriia	976|Bacteroidetes	C	COG1529 Aerobic-type carbon monoxide dehydrogenase large subunit CoxL CutL homologs	-	-	1.3.99.16	ko:K07303	-	-	-	-	ko00000,ko01000	-	-	-	Ald_Xan_dh_C2
BYD3_k127_8595105_16	760192.Halhy_0717	1.652e-80	270.0	COG2080@1|root,COG2080@2|Bacteria,4NM72@976|Bacteroidetes,1IWSE@117747|Sphingobacteriia	976|Bacteroidetes	C	[2Fe-2S] binding domain	-	-	1.3.99.16	ko:K07302	-	-	-	-	ko00000,ko01000	-	-	-	Fer2,Fer2_2
BYD3_k127_8607645_69	1237149.C900_03538	1.583e-134	438.0	COG0451@1|root,COG0451@2|Bacteria,4NI6B@976|Bacteroidetes,47UHB@768503|Cytophagia	976|Bacteroidetes	GM	RmlD substrate binding domain	-	-	-	-	-	-	-	-	-	-	-	-	Epimerase
BYD3_k127_8607645_116	1279009.ADICEAN_02249	1.851e-87	291.0	COG0451@1|root,COG0451@2|Bacteria,4NN4T@976|Bacteroidetes,47P8P@768503|Cytophagia	976|Bacteroidetes	GM	Vitamin K epoxide reductase family	-	-	-	-	-	-	-	-	-	-	-	-	VKOR
BYD3_k127_8607645_188	1237149.C900_04479	2.704e-34	134.0	COG0451@1|root,COG0451@2|Bacteria,4NVIQ@976|Bacteroidetes,47W2D@768503|Cytophagia	976|Bacteroidetes	GM	SPW repeat	-	-	-	-	-	-	-	-	-	-	-	-	SPW
BYD3_k127_8607645_190	204536.SULAZ_1471	2.336e-33	134.0	COG5502@1|root,COG5502@2|Bacteria	2|Bacteria	V	conserved protein (DUF2267)	-	-	2.1.1.72	ko:K03427,ko:K06910,ko:K07005	-	-	-	-	ko00000,ko01000,ko02048	-	-	-	DUF2267
BYD3_k127_8607645_149	153721.MYP_3378	2.292e-60	215.0	COG1926@1|root,COG1926@2|Bacteria,4NRU7@976|Bacteroidetes,47QIG@768503|Cytophagia	976|Bacteroidetes	S	Phosphoribosyl transferase domain	-	-	-	ko:K07100	-	-	-	-	ko00000	-	-	-	Pribosyltran
BYD3_k127_8607645_189	1124780.ANNU01000024_gene3047	4.332e-34	135.0	COG0071@1|root,COG0071@2|Bacteria,4NQXY@976|Bacteroidetes,47R7Q@768503|Cytophagia	976|Bacteroidetes	O	Belongs to the small heat shock protein (HSP20) family	-	-	-	ko:K13993	ko04141,map04141	-	-	-	ko00000,ko00001,ko03110	-	-	-	HSP20
BYD3_k127_8607645_126	1094980.Mpsy_2682	3.478e-75	263.0	COG0604@1|root,arCOG01458@2157|Archaea,2XURG@28890|Euryarchaeota,2N9N6@224756|Methanomicrobia	224756|Methanomicrobia	C	Zinc-binding dehydrogenase	-	-	-	-	-	-	-	-	-	-	-	-	ADH_N,ADH_zinc_N_2
BYD3_k127_8607645_78	1237149.C900_01991	1.967e-122	406.0	COG0642@1|root,COG2205@2|Bacteria,4NG0Y@976|Bacteroidetes,47JUV@768503|Cytophagia	976|Bacteroidetes	T	Histidine kinase	-	-	-	-	-	-	-	-	-	-	-	-	GAF_2,HATPase_c,HisKA,PAS,PAS_3,PAS_9
BYD3_k127_8607645_82	761193.Runsl_5254	7.12e-120	394.0	COG0664@1|root,COG0745@1|root,COG0664@2|Bacteria,COG0745@2|Bacteria,4NFB1@976|Bacteroidetes,47JY7@768503|Cytophagia	976|Bacteroidetes	K	Transcriptional regulator, Crp Fnr family	-	-	-	-	-	-	-	-	-	-	-	-	HTH_Crp_2,Response_reg,cNMP_binding
BYD3_k127_8607645_195	866536.Belba_3765	1.858e-28	123.0	COG2836@1|root,COG2836@2|Bacteria,4NF84@976|Bacteroidetes,47QDS@768503|Cytophagia	976|Bacteroidetes	S	Cytochrome C biogenesis protein transmembrane region	-	-	-	ko:K09792	-	-	-	-	ko00000	-	-	-	DsbD_2
BYD3_k127_8607645_198	1237149.C900_03362	1.614e-26	114.0	COG3198@1|root,COG3198@2|Bacteria,4PPZ3@976|Bacteroidetes,47RV1@768503|Cytophagia	976|Bacteroidetes	S	FixH	ccoH	-	-	ko:K09926	-	-	-	-	ko00000	-	-	-	FixH
BYD3_k127_8607645_36	1237149.C900_03363	1.451e-199	632.0	COG0348@1|root,COG0348@2|Bacteria,4NFDN@976|Bacteroidetes,47KT1@768503|Cytophagia	976|Bacteroidetes	C	TIGRFAM cytochrome c oxidase accessory protein	ccoG	-	-	-	-	-	-	-	-	-	-	-	Fer4_18,Fer4_5,FixG_C
BYD3_k127_8607645_128	1237149.C900_03364	1.739e-73	258.0	COG2010@1|root,COG2010@2|Bacteria,4NFMJ@976|Bacteroidetes,47PY8@768503|Cytophagia	976|Bacteroidetes	C	TIGRFAM cytochrome c oxidase, cbb3-type, subunit III	ccoP	-	-	ko:K00406	ko00190,ko01100,ko02020,map00190,map01100,map02020	M00156	-	-	ko00000,ko00001,ko00002	3.D.4.3	-	-	Cytochrome_CBB3,FixP_N
BYD3_k127_8607645_3	1237149.C900_03366	0.0	1220.0	COG2993@1|root,COG3278@1|root,COG2993@2|Bacteria,COG3278@2|Bacteria,4NEGM@976|Bacteroidetes,47MI5@768503|Cytophagia	976|Bacteroidetes	C	Belongs to the heme-copper respiratory oxidase family	ccoN	-	1.9.3.1	ko:K15862	ko00190,ko01100,ko02020,map00190,map01100,map02020	M00156	-	-	ko00000,ko00001,ko00002,ko01000	3.D.4.3	-	-	COX1,FixO
BYD3_k127_8607645_158	1121889.AUDM01000004_gene2654	4.513e-56	204.0	COG2846@1|root,COG2846@2|Bacteria,4NE9M@976|Bacteroidetes,1HXS5@117743|Flavobacteriia,2NUSC@237|Flavobacterium	976|Bacteroidetes	D	Di-iron-containing protein involved in the repair of iron-sulfur clusters	ric	-	-	ko:K07322	-	-	-	-	ko00000	-	-	-	Hemerythrin,ScdA_N
BYD3_k127_8607645_155	1237149.C900_01994	6.499e-57	205.0	COG0664@1|root,COG0664@2|Bacteria,4NM5E@976|Bacteroidetes,47R9U@768503|Cytophagia	976|Bacteroidetes	K	Cyclic nucleotide-monophosphate binding domain	-	-	-	-	-	-	-	-	-	-	-	-	HTH_Crp_2,cNMP_binding
BYD3_k127_8607645_179	1237149.C900_02002	1.95e-39	153.0	COG2346@1|root,COG2346@2|Bacteria,4NQCV@976|Bacteroidetes,47R5V@768503|Cytophagia	976|Bacteroidetes	S	Bacterial-like globin	-	-	-	ko:K06886	-	-	-	-	ko00000	-	-	-	Bac_globin
BYD3_k127_8607645_167	1089547.KB913013_gene4646	1.343e-49	183.0	COG2335@1|root,COG2335@2|Bacteria,4NMPI@976|Bacteroidetes,47XS3@768503|Cytophagia	976|Bacteroidetes	M	Four repeated domains in the Fasciclin I family of proteins, present in many other contexts.	-	-	-	-	-	-	-	-	-	-	-	-	Fasciclin
BYD3_k127_8607645_110	1048983.EL17_22570	4.393e-97	323.0	COG1277@1|root,COG1277@2|Bacteria,4NGGR@976|Bacteroidetes,47KSX@768503|Cytophagia	976|Bacteroidetes	S	ABC-2 family transporter protein	-	-	-	ko:K19341	ko02010,map02010	M00762	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.132.2	-	-	ABC2_membrane_2,ABC2_membrane_5
BYD3_k127_8607645_122	1341155.FSS13T_01890	3.507e-79	271.0	COG1131@1|root,COG1131@2|Bacteria,4NG9T@976|Bacteroidetes,1HYYD@117743|Flavobacteriia,2NU88@237|Flavobacterium	976|Bacteroidetes	V	ATPases associated with a variety of cellular activities	-	-	-	ko:K19340	ko02010,map02010	M00762	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.132.2	-	-	ABC_tran
BYD3_k127_8607645_59	1048983.EL17_22580	1.069e-151	489.0	COG3420@1|root,COG3420@2|Bacteria,4NEGT@976|Bacteroidetes,47KEF@768503|Cytophagia	976|Bacteroidetes	P	Periplasmic copper-binding protein (NosD)	nosD	-	-	ko:K07218	-	-	-	-	ko00000	-	-	-	NosD
BYD3_k127_8607645_180	1048983.EL17_22585	5.726e-38	147.0	COG4314@1|root,COG4314@2|Bacteria,4NVVP@976|Bacteroidetes,47S32@768503|Cytophagia	976|Bacteroidetes	C	NosL	-	-	-	ko:K19342	-	-	-	-	ko00000	-	-	-	NosL
BYD3_k127_8607645_130	866536.Belba_1978	3.99e-71	245.0	COG4314@1|root,COG4314@2|Bacteria,4NIPU@976|Bacteroidetes,47NSZ@768503|Cytophagia	976|Bacteroidetes	C	lipoprotein involved in nitrous oxide reduction	-	-	-	ko:K19342	-	-	-	-	ko00000	-	-	-	NosL
BYD3_k127_8607645_10	761193.Runsl_0111	0.0	1075.0	COG4263@1|root,COG4263@2|Bacteria,4NFNE@976|Bacteroidetes,47KTB@768503|Cytophagia	976|Bacteroidetes	C	Nitrous oxide reductase	nosZ	-	1.7.2.4	ko:K00376	ko00910,ko01120,map00910,map01120	M00529	R02804	RC02861	ko00000,ko00001,ko00002,ko01000	-	-	-	-
BYD3_k127_8607645_161	760192.Halhy_5490	7.973e-54	193.0	COG2010@1|root,COG2010@2|Bacteria,4NMD5@976|Bacteroidetes,1ISPY@117747|Sphingobacteriia	976|Bacteroidetes	C	PFAM cytochrome c	-	-	-	-	-	-	-	-	-	-	-	-	Cytochrom_C
BYD3_k127_8607645_49	926549.KI421517_gene2767	8.804e-173	553.0	COG0635@1|root,COG0635@2|Bacteria,4NEY5@976|Bacteroidetes,47K3T@768503|Cytophagia	976|Bacteroidetes	H	Belongs to the anaerobic coproporphyrinogen-III oxidase family	hemN	-	-	-	-	-	-	-	-	-	-	-	HemN_C,Radical_SAM
BYD3_k127_8607645_210	1313301.AUGC01000014_gene2496	1.017e-10	64.0	COG3197@1|root,COG3197@2|Bacteria	2|Bacteria	P	Cytochrome oxidase maturation protein	ccoS	-	-	-	-	-	-	-	-	-	-	-	FixS
BYD3_k127_8607645_42	926550.CLDAP_00380	3.029e-181	576.0	COG0427@1|root,COG0427@2|Bacteria,2G60V@200795|Chloroflexi	200795|Chloroflexi	C	PFAM Acetyl-CoA hydrolase transferase	-	-	3.1.2.1	ko:K01067	ko00620,map00620	-	R00227	RC00004,RC00012	ko00000,ko00001,ko01000	-	-	-	AcetylCoA_hyd_C,AcetylCoA_hydro
BYD3_k127_8607645_27	1048983.EL17_01565	1.409e-229	735.0	COG2217@1|root,COG2217@2|Bacteria,4NEI1@976|Bacteroidetes,47N4X@768503|Cytophagia	976|Bacteroidetes	P	ATPase, P-type (transporting), HAD superfamily, subfamily IC	ccoI	-	3.6.3.4,3.6.3.54	ko:K01533,ko:K17686	ko01524,ko04016,map01524,map04016	-	R00086	RC00002	ko00000,ko00001,ko01000	3.A.3.5	-	-	ATPase-cat_bd,E1-E2_ATPase,HMA,Hydrolase
BYD3_k127_8607645_154	1237149.C900_00541	3.882e-57	209.0	COG0589@1|root,COG0589@2|Bacteria,4NFZ5@976|Bacteroidetes,47PIA@768503|Cytophagia	976|Bacteroidetes	T	Universal stress protein	-	-	-	-	-	-	-	-	-	-	-	-	Usp
BYD3_k127_8607645_50	1121904.ARBP01000010_gene2265	1.604e-172	554.0	COG1236@1|root,COG1236@2|Bacteria,4NESD@976|Bacteroidetes,47K9F@768503|Cytophagia	976|Bacteroidetes	J	exonuclease of the beta-lactamase fold involved in RNA processing	-	-	-	ko:K07576	-	-	-	-	ko00000	-	-	-	Beta-Casp,Lactamase_B,Lactamase_B_6,RMMBL
BYD3_k127_8607645_153	1237149.C900_03829	1.87e-57	211.0	COG0589@1|root,COG0589@2|Bacteria	2|Bacteria	T	AMP binding	uspA	-	-	-	-	-	-	-	-	-	-	-	DUF2007,Usp
BYD3_k127_8607645_97	1237149.C900_03830	2.457e-103	345.0	COG1463@1|root,COG1463@2|Bacteria,4NGHE@976|Bacteroidetes,47T9B@768503|Cytophagia	976|Bacteroidetes	Q	MlaD protein	-	-	-	ko:K02067	ko02010,map02010	M00210,M00669,M00670	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.27	-	-	MlaD
BYD3_k127_8607645_93	1123057.P872_21820	4.883e-109	358.0	COG1127@1|root,COG1127@2|Bacteria,4NETJ@976|Bacteroidetes,47NIJ@768503|Cytophagia	976|Bacteroidetes	Q	ABC transporter	-	-	-	ko:K02065	ko02010,map02010	M00210,M00669,M00670	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.27	-	-	ABC_tran
BYD3_k127_8607645_75	1237149.C900_03832	2.837e-127	410.0	COG0767@1|root,COG0767@2|Bacteria,4NF7X@976|Bacteroidetes,47K33@768503|Cytophagia	976|Bacteroidetes	Q	ABC-type transport system involved in resistance to organic solvents permease component	-	-	-	ko:K02066	ko02010,map02010	M00210,M00669,M00670	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.27	-	-	MlaE
BYD3_k127_8607645_131	1121904.ARBP01000004_gene1027	6.825e-71	247.0	COG1814@1|root,COG1814@2|Bacteria,4NE6W@976|Bacteroidetes,47M4I@768503|Cytophagia	976|Bacteroidetes	S	VIT family	-	-	-	-	-	-	-	-	-	-	-	-	VIT1
BYD3_k127_8607645_120	1189619.pgond44_06525	6.473e-82	286.0	arCOG10456@1|root,2ZA6T@2|Bacteria,4NGZ2@976|Bacteroidetes,1HXIA@117743|Flavobacteriia,4C49D@83612|Psychroflexus	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_8607645_163	1237149.C900_00284	4.357e-52	196.0	COG0589@1|root,COG0589@2|Bacteria,4NFZ5@976|Bacteroidetes,47PIA@768503|Cytophagia	976|Bacteroidetes	T	Universal stress protein	-	-	-	-	-	-	-	-	-	-	-	-	Usp
BYD3_k127_8607645_183	710685.MycrhN_3254	4.161e-37	148.0	COG3832@1|root,COG3832@2|Bacteria,2GY9A@201174|Actinobacteria,233HR@1762|Mycobacteriaceae	201174|Actinobacteria	E	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_8607645_129	1237149.C900_02137	4.237e-73	252.0	COG0558@1|root,COG0558@2|Bacteria,4NHGH@976|Bacteroidetes,47X8N@768503|Cytophagia	976|Bacteroidetes	I	CDP-alcohol phosphatidyltransferase	-	-	2.7.8.5	ko:K00995	ko00564,ko01100,map00564,map01100	-	R01801	RC00002,RC00017,RC02795	ko00000,ko00001,ko01000	-	-	-	CDP-OH_P_transf
BYD3_k127_8607645_166	153721.MYP_4722	9.37e-51	183.0	COG0662@1|root,COG0662@2|Bacteria,4NV84@976|Bacteroidetes	976|Bacteroidetes	G	Cupin 2, conserved barrel domain protein	-	-	-	-	-	-	-	-	-	-	-	-	Cupin_2
BYD3_k127_8607645_159	1237149.C900_02138	1.978e-55	199.0	COG0716@1|root,COG0716@2|Bacteria,4NVV8@976|Bacteroidetes	976|Bacteroidetes	C	FMN binding	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_8607645_0	929556.Solca_0449	0.0	1427.0	COG1538@1|root,COG3696@1|root,COG1538@2|Bacteria,COG3696@2|Bacteria,4P36A@976|Bacteroidetes,1IQBJ@117747|Sphingobacteriia	976|Bacteroidetes	P	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family	-	-	-	ko:K15726	-	-	-	-	ko00000,ko02000	2.A.6.1.2	-	-	ACR_tran,OEP
BYD3_k127_8607645_111	1408813.AYMG01000008_gene3914	1.882e-94	323.0	COG3696@1|root,COG3696@2|Bacteria,4P36A@976|Bacteroidetes,1IQBJ@117747|Sphingobacteriia	976|Bacteroidetes	P	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family	-	-	-	ko:K15726	-	-	-	-	ko00000,ko02000	2.A.6.1.2	-	-	ACR_tran,OEP
BYD3_k127_8607645_92	1408813.AYMG01000008_gene3913	4.46e-109	364.0	COG0845@1|root,COG0845@2|Bacteria,4NDW5@976|Bacteroidetes,1IQBG@117747|Sphingobacteriia	976|Bacteroidetes	M	Barrel-sandwich domain of CusB or HlyD membrane-fusion	-	-	-	ko:K15727	-	-	-	-	ko00000,ko02000	8.A.1.2.1	-	-	HlyD_D23
BYD3_k127_8607645_6	1237149.C900_02140	0.0	1169.0	COG0574@1|root,COG1080@1|root,COG0574@2|Bacteria,COG1080@2|Bacteria,4NEHE@976|Bacteroidetes,47JHD@768503|Cytophagia	976|Bacteroidetes	G	Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate	ppsA	-	2.7.9.2	ko:K01007	ko00620,ko00680,ko00720,ko01100,ko01120,ko01200,map00620,map00680,map00720,map01100,map01120,map01200	M00173,M00374	R00199	RC00002,RC00015	ko00000,ko00001,ko00002,ko01000	-	-	-	PEP-utilizers,PEP-utilizers_C,PPDK_N
BYD3_k127_8607645_213	886377.Murru_2233	1.708e-08	61.0	2CYW5@1|root,32T50@2|Bacteria,4NS73@976|Bacteroidetes,1I3WS@117743|Flavobacteriia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_8607645_91	1237149.C900_02142	3.991e-109	364.0	COG0628@1|root,COG0628@2|Bacteria,4NFHZ@976|Bacteroidetes,47NU0@768503|Cytophagia	976|Bacteroidetes	S	AI-2E family transporter	-	-	-	-	-	-	-	-	-	-	-	-	AI-2E_transport
BYD3_k127_8607645_152	1121870.AUAA01000035_gene111	7.391e-58	205.0	COG1764@1|root,COG1764@2|Bacteria,4NNF7@976|Bacteroidetes,1I1XV@117743|Flavobacteriia,3HIF1@358033|Chryseobacterium	976|Bacteroidetes	O	OsmC-like protein	-	-	-	-	-	-	-	-	-	-	-	-	OsmC
BYD3_k127_8607645_134	485918.Cpin_6595	3.168e-69	253.0	COG2989@1|root,COG2989@2|Bacteria,4NH3J@976|Bacteroidetes,1IVIF@117747|Sphingobacteriia	976|Bacteroidetes	S	L,D-transpeptidase catalytic domain	-	-	-	ko:K21470	-	-	-	-	ko00000,ko01002,ko01011	-	-	-	PG_binding_1,YkuD
BYD3_k127_8607645_170	1237149.C900_03826	2.748e-47	174.0	COG3467@1|root,COG3467@2|Bacteria,4NQFR@976|Bacteroidetes,47QC8@768503|Cytophagia	976|Bacteroidetes	S	Pyridoxamine 5'-phosphate oxidase	-	-	-	ko:K07005	-	-	-	-	ko00000	-	-	-	Pyridox_ox_2
BYD3_k127_8607645_139	1279009.ADICEAN_03416	5.319e-67	237.0	COG1376@1|root,COG1376@2|Bacteria,4NNX7@976|Bacteroidetes,47NYB@768503|Cytophagia	976|Bacteroidetes	S	L,D-transpeptidase catalytic domain	-	-	-	-	-	-	-	-	-	-	-	-	YkuD_2
BYD3_k127_8607645_200	1392498.JQLH01000001_gene1743	2.249e-22	101.0	2CYW5@1|root,32T50@2|Bacteria,4NS73@976|Bacteroidetes,1I3WS@117743|Flavobacteriia,2PHRY@252356|Maribacter	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_8607645_186	1336803.PHEL49_0743	4.125e-35	138.0	2A813@1|root,30X1F@2|Bacteria,4NP0A@976|Bacteroidetes,1I2B5@117743|Flavobacteriia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_8607645_185	1123057.P872_13630	2.595e-35	140.0	COG0645@1|root,COG0645@2|Bacteria,4NSKU@976|Bacteroidetes,47RG0@768503|Cytophagia	976|Bacteroidetes	S	Chromatin associated protein KTI12	-	-	-	-	-	-	-	-	-	-	-	-	AAA_33
BYD3_k127_8607645_109	1123057.P872_13625	1.28e-97	329.0	COG2187@1|root,COG2187@2|Bacteria,4NKD3@976|Bacteroidetes,47PG2@768503|Cytophagia	976|Bacteroidetes	S	Protein conserved in bacteria	-	-	-	ko:K07028	-	-	-	-	ko00000	-	-	-	AAA_33
BYD3_k127_8607645_206	1237149.C900_02153	3.262e-16	81.0	COG1544@1|root,COG1544@2|Bacteria	2|Bacteria	J	regulation of translation	hpf	-	-	ko:K03733,ko:K05808,ko:K05809	-	-	-	-	ko00000,ko03009,ko03036	-	-	-	Ribosom_S30AE_C,Ribosomal_S30AE
BYD3_k127_8607645_173	1237149.C900_02150	1.147e-45	169.0	COG0071@1|root,COG0071@2|Bacteria,4NQXY@976|Bacteroidetes,47R7Q@768503|Cytophagia	976|Bacteroidetes	O	Belongs to the small heat shock protein (HSP20) family	-	-	-	ko:K13993	ko04141,map04141	-	-	-	ko00000,ko00001,ko03110	-	-	-	HSP20
BYD3_k127_8607645_58	1237149.C900_03082	2.925e-153	490.0	COG1064@1|root,COG1064@2|Bacteria,4NJ7A@976|Bacteroidetes,47XCS@768503|Cytophagia	976|Bacteroidetes	S	Zinc-binding dehydrogenase	-	-	1.1.1.1	ko:K13953	ko00010,ko00071,ko00350,ko00625,ko00626,ko00830,ko00980,ko00982,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00625,map00626,map00830,map00980,map00982,map01100,map01110,map01120,map01130,map01220	-	R00623,R00754,R02124,R04880,R05233,R05234,R06917,R06927,R07105,R08281,R08306,R08310	RC00050,RC00087,RC00088,RC00099,RC00116,RC00649,RC01734,RC02273	ko00000,ko00001,ko01000	-	-	-	ADH_N,ADH_zinc_N_2
BYD3_k127_8607645_140	1237149.C900_02052	2.819e-65	228.0	COG1595@1|root,COG1595@2|Bacteria,4NMYQ@976|Bacteroidetes,47PII@768503|Cytophagia	976|Bacteroidetes	K	TIGRFAM RNA polymerase sigma factor, sigma-70 family	-	-	-	ko:K03088	-	-	-	-	ko00000,ko03021	-	-	-	Sigma70_r2,Sigma70_r4_2
BYD3_k127_8607645_86	1237149.C900_05633	7.968e-116	409.0	COG3292@1|root,COG4585@1|root,COG3292@2|Bacteria,COG4585@2|Bacteria,4NHSC@976|Bacteroidetes,47NEM@768503|Cytophagia	976|Bacteroidetes	T	Two component regulator three Y	-	-	-	-	-	-	-	-	-	-	-	-	HATPase_c,HisKA_3,Reg_prop,SpoIIE,Y_Y_Y
BYD3_k127_8607645_119	1189612.A33Q_3933	4.294e-83	280.0	COG2197@1|root,COG2197@2|Bacteria,4NR4G@976|Bacteroidetes,47UM2@768503|Cytophagia	976|Bacteroidetes	K	helix_turn_helix, Lux Regulon	-	-	-	-	-	-	-	-	-	-	-	-	GerE,Response_reg
BYD3_k127_8607645_2	1279009.ADICEAN_03722	0.0	1248.0	COG1629@1|root,COG1629@2|Bacteria,4PKAS@976|Bacteroidetes,47YAG@768503|Cytophagia	976|Bacteroidetes	P	TonB-dependent Receptor Plug Domain	-	-	-	-	-	-	-	-	-	-	-	-	CarbopepD_reg_2,Plug,TonB_dep_Rec
BYD3_k127_8607645_52	1237149.C900_05636	7.349e-167	541.0	COG0521@1|root,COG0521@2|Bacteria,4NFT1@976|Bacteroidetes,47M7F@768503|Cytophagia	976|Bacteroidetes	H	Starch-binding associating with outer membrane	-	-	-	-	-	-	-	-	-	-	-	-	SusD-like_2
BYD3_k127_8607645_208	1279009.ADICEAN_03720	2.391e-13	80.0	2DG20@1|root,2ZU4Q@2|Bacteria	2|Bacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_8607645_105	1123057.P872_24640	6.243e-100	350.0	COG0457@1|root,COG0642@1|root,COG0457@2|Bacteria,COG2205@2|Bacteria,4NI29@976|Bacteroidetes,47UB6@768503|Cytophagia	976|Bacteroidetes	T	Tetratricopeptide repeat	-	-	-	-	-	-	-	-	-	-	-	-	HATPase_c,TPR_10,TPR_12,TPR_7,TPR_8
BYD3_k127_8607645_150	929556.Solca_3751	4.919e-60	218.0	COG1597@1|root,COG1597@2|Bacteria,4NJWB@976|Bacteroidetes,1IQ8Q@117747|Sphingobacteriia	976|Bacteroidetes	I	Diacylglycerol kinase	-	-	-	-	-	-	-	-	-	-	-	-	DAGK_cat
BYD3_k127_8607645_193	1237149.C900_05730	1.053e-30	122.0	COG0236@1|root,COG0236@2|Bacteria	2|Bacteria	IQ	Carrier of the growing fatty acid chain in fatty acid biosynthesis	acpP	-	-	ko:K02078	-	-	-	-	ko00000,ko00001	-	-	-	PP-binding
BYD3_k127_8607645_79	1121904.ARBP01000012_gene1248	2.747e-121	404.0	COG5000@1|root,COG5000@2|Bacteria,4NEWF@976|Bacteroidetes,47JZG@768503|Cytophagia	976|Bacteroidetes	T	Histidine kinase	-	-	-	-	-	-	-	-	-	-	-	-	HATPase_c
BYD3_k127_8607645_29	1237149.C900_05728	3.37e-224	702.0	COG2204@1|root,COG2204@2|Bacteria,4NE89@976|Bacteroidetes,47JF9@768503|Cytophagia	976|Bacteroidetes	T	two component, sigma54 specific, transcriptional regulator, Fis family	-	-	-	-	-	-	-	-	-	-	-	-	HTH_8,Response_reg,Sigma54_activat
BYD3_k127_8607645_203	153721.MYP_1307	1.567e-20	101.0	2CGN1@1|root,32S49@2|Bacteria,4NQPU@976|Bacteroidetes,47R8D@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_8607645_81	1237149.C900_05722	6.081e-120	390.0	COG2908@1|root,COG2908@2|Bacteria,4NEF1@976|Bacteroidetes,47JQJ@768503|Cytophagia	976|Bacteroidetes	S	Calcineurin-like phosphoesterase	lpxH	-	3.6.1.54	ko:K03269	ko00540,ko01100,map00540,map01100	M00060	R04549	RC00002	ko00000,ko00001,ko00002,ko01000,ko01005	-	-	-	Metallophos,Metallophos_2
BYD3_k127_8607645_11	1237149.C900_05721	7.7e-322	996.0	COG0465@1|root,COG0465@2|Bacteria,4NF0E@976|Bacteroidetes,47KKF@768503|Cytophagia	976|Bacteroidetes	O	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins	ftsH	-	-	ko:K03798	-	M00742	-	-	ko00000,ko00002,ko01000,ko01002,ko03110	-	-	-	AAA,FtsH_ext,Peptidase_M41
BYD3_k127_8607645_168	1237149.C900_05720	3.315e-49	178.0	COG0799@1|root,COG0799@2|Bacteria,4NSKK@976|Bacteroidetes,47Q9C@768503|Cytophagia	976|Bacteroidetes	S	Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation	rsfS	-	-	ko:K09710	-	-	-	-	ko00000,ko03009	-	-	-	RsfS
BYD3_k127_8607645_132	1124780.ANNU01000054_gene3527	3.687e-70	246.0	COG0340@1|root,COG0340@2|Bacteria,4NHCH@976|Bacteroidetes,47MUP@768503|Cytophagia	976|Bacteroidetes	H	PFAM Biotin lipoate A B protein ligase	birA	-	6.3.4.15	ko:K03524	ko00780,ko01100,map00780,map01100	-	R01074,R05145	RC00043,RC00070,RC00096,RC02896	ko00000,ko00001,ko01000,ko03000	-	-	-	BPL_LplA_LipB
BYD3_k127_8607645_51	1123248.KB893348_gene332	1.743e-168	537.0	COG0116@1|root,COG0116@2|Bacteria,4NFJM@976|Bacteroidetes,1IQEJ@117747|Sphingobacteriia	976|Bacteroidetes	L	Belongs to the methyltransferase superfamily	ypsC	-	-	ko:K07444	-	-	-	-	ko00000,ko01000	-	-	-	THUMP,UPF0020
BYD3_k127_8607645_17	1237149.C900_05611	2.208e-275	856.0	COG1164@1|root,COG1164@2|Bacteria,4NFYH@976|Bacteroidetes,47JSX@768503|Cytophagia	976|Bacteroidetes	E	PFAM peptidase M3A and M3B thimet oligopeptidase F	pepF	-	-	ko:K08602	-	-	-	-	ko00000,ko01000,ko01002	-	-	-	Peptidase_M3,Peptidase_M3_N
BYD3_k127_8607645_172	1237149.C900_05615	4.654e-46	171.0	COG1846@1|root,COG1846@2|Bacteria,4NQ5T@976|Bacteroidetes,47QE6@768503|Cytophagia	976|Bacteroidetes	K	transcriptional regulator	slyA	-	-	-	-	-	-	-	-	-	-	-	MarR,MarR_2
BYD3_k127_8607645_147	1237149.C900_05616	1.692e-61	219.0	COG2353@1|root,COG2353@2|Bacteria,4NPGK@976|Bacteroidetes	976|Bacteroidetes	S	Belongs to the UPF0312 family	-	-	-	-	-	-	-	-	-	-	-	-	YceI
BYD3_k127_8607645_164	1121098.HMPREF1534_00989	3.094e-51	190.0	COG4123@1|root,COG4123@2|Bacteria,4NG1X@976|Bacteroidetes,2FMHH@200643|Bacteroidia,4AN81@815|Bacteroidaceae	976|Bacteroidetes	J	Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC)	smtA	GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008175,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016426,GO:0016430,GO:0016740,GO:0016741,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360	2.1.1.223	ko:K15460	-	-	-	-	ko00000,ko01000,ko03016	-	-	-	MTS
BYD3_k127_8607645_108	421531.IX38_22655	4.406e-98	332.0	COG0673@1|root,COG0673@2|Bacteria,4NFY3@976|Bacteroidetes,1I19J@117743|Flavobacteriia,3ZQE3@59732|Chryseobacterium	976|Bacteroidetes	S	Oxidoreductase family, C-terminal alpha/beta domain	-	-	-	-	-	-	-	-	-	-	-	-	GFO_IDH_MocA,GFO_IDH_MocA_C
BYD3_k127_8607645_136	468059.AUHA01000008_gene2774	1.223e-68	237.0	COG0662@1|root,COG0662@2|Bacteria,4NNWT@976|Bacteroidetes,1IS93@117747|Sphingobacteriia	976|Bacteroidetes	G	isomerase	-	-	-	-	-	-	-	-	-	-	-	-	MannoseP_isomer
BYD3_k127_8607645_77	1237149.C900_03398	2.28e-125	415.0	COG1680@1|root,COG1680@2|Bacteria,4NEVS@976|Bacteroidetes,47NMR@768503|Cytophagia	976|Bacteroidetes	V	Beta-lactamase	-	-	-	-	-	-	-	-	-	-	-	-	Beta-lactamase
BYD3_k127_8607645_88	1237149.C900_02209	7.613e-114	372.0	COG0177@1|root,COG0177@2|Bacteria,4NE7K@976|Bacteroidetes,47K0Q@768503|Cytophagia	976|Bacteroidetes	L	TIGRFAM TIGR02757 family protein	-	-	-	-	-	-	-	-	-	-	-	-	DUF2400
BYD3_k127_8607645_61	1237149.C900_03263	3.215e-151	489.0	COG2010@1|root,COG2010@2|Bacteria,4NF0A@976|Bacteroidetes,47J8Z@768503|Cytophagia	976|Bacteroidetes	C	PFAM Class III cytochrome C family	actA	-	-	-	-	-	-	-	-	-	-	-	Cytochrom_C,Cytochrom_CIII,Cytochrome_C7
BYD3_k127_8607645_1	1237149.C900_03264	0.0	1250.0	COG0437@1|root,COG0437@2|Bacteria,4NE5M@976|Bacteroidetes,47NK7@768503|Cytophagia	976|Bacteroidetes	C	4Fe-4S dicluster domain	nrfC	-	-	ko:K00184	-	-	-	-	ko00000	5.A.3	-	-	Fer4_7,Molydop_binding
BYD3_k127_8607645_21	1237149.C900_03265	8.868e-255	790.0	COG5557@1|root,COG5557@2|Bacteria,4NE3X@976|Bacteroidetes,47K18@768503|Cytophagia	976|Bacteroidetes	C	PFAM Polysulphide reductase, NrfD	nrfD	-	-	ko:K00185	-	-	-	-	ko00000	5.A.3	-	-	NrfD
BYD3_k127_8607645_127	1288963.ADIS_4534	1.892e-74	254.0	COG2010@1|root,COG2010@2|Bacteria,4NEX9@976|Bacteroidetes,47K4U@768503|Cytophagia	976|Bacteroidetes	C	Quinol cytochrome c oxidoreductase membrane protein	actD	-	-	-	-	-	-	-	-	-	-	-	DUF3341
BYD3_k127_8607645_137	1237149.C900_03267	2.426e-67	236.0	COG2010@1|root,COG2010@2|Bacteria,4NKQI@976|Bacteroidetes,47PEX@768503|Cytophagia	976|Bacteroidetes	C	PFAM Cytochrome C	actE	-	-	-	-	-	-	-	-	-	-	-	Cytochrome_CBB3
BYD3_k127_8607645_41	1237149.C900_03268	1.085e-181	580.0	COG4531@1|root,COG4531@2|Bacteria,4NF0R@976|Bacteroidetes,47JUF@768503|Cytophagia	976|Bacteroidetes	P	Quinol cytochrome c oxidoreductase	actF	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_8607645_72	1237149.C900_03269	6.048e-132	430.0	COG1622@1|root,COG1622@2|Bacteria,4NFNF@976|Bacteroidetes,47JF8@768503|Cytophagia	976|Bacteroidetes	C	Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B)	ctaC	-	1.9.3.1	ko:K02275	ko00190,ko01100,map00190,map01100	M00155	R00081	RC00016	ko00000,ko00001,ko00002,ko01000	3.D.4.2,3.D.4.4,3.D.4.6	-	-	COX2,COX2_TM
BYD3_k127_8607645_7	1237149.C900_03270	0.0	1112.0	COG0843@1|root,COG0843@2|Bacteria,4NEH8@976|Bacteroidetes,47JBQ@768503|Cytophagia	976|Bacteroidetes	C	Belongs to the heme-copper respiratory oxidase family	coxN	-	1.9.3.1	ko:K02274	ko00190,ko01100,map00190,map01100	M00155	R00081	RC00016	ko00000,ko00001,ko00002,ko01000	3.D.4.2,3.D.4.3,3.D.4.4,3.D.4.6	-	-	COX1
BYD3_k127_8607645_101	1237149.C900_03271	3.636e-102	342.0	COG1612@1|root,COG1612@2|Bacteria,4NEBR@976|Bacteroidetes,47JI1@768503|Cytophagia	976|Bacteroidetes	O	Cytochrome oxidase assembly protein	ctaA	-	-	ko:K02259	ko00190,ko00860,ko01100,ko01110,ko02020,ko04714,map00190,map00860,map01100,map01110,map02020,map04714	M00154	R07412	RC00769	ko00000,ko00001,ko00002,ko03029	3.D.4.4	-	-	COX15-CtaA
BYD3_k127_8607645_70	1237149.C900_03272	4.009e-133	433.0	COG0109@1|root,COG0109@2|Bacteria,4NF5A@976|Bacteroidetes,47MB0@768503|Cytophagia	976|Bacteroidetes	O	Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group	ctaB	-	2.5.1.141	ko:K02257	ko00190,ko00860,ko01100,ko01110,ko04714,map00190,map00860,map01100,map01110,map04714	M00154	R07411	RC01786	ko00000,ko00001,ko00002,ko01000,ko01006,ko03029	-	-	-	UbiA
BYD3_k127_8607645_118	1237149.C900_03273	4.716e-84	282.0	COG1845@1|root,COG1845@2|Bacteria,4NFA7@976|Bacteroidetes,47NS2@768503|Cytophagia	976|Bacteroidetes	C	PFAM cytochrome c oxidase subunit III	ctaE	-	1.9.3.1	ko:K02276	ko00190,ko01100,map00190,map01100	M00155	R00081	RC00016	ko00000,ko00001,ko00002,ko01000	3.D.4.4,3.D.4.6	-	-	COX3
BYD3_k127_8607645_80	643867.Ftrac_3697	4.644e-121	392.0	COG1845@1|root,COG1845@2|Bacteria,4NDYG@976|Bacteroidetes,47JVP@768503|Cytophagia	976|Bacteroidetes	C	cytochrome c oxidase subunit III	coxP	-	1.9.3.1	ko:K02276	ko00190,ko01100,map00190,map01100	M00155	R00081	RC00016	ko00000,ko00001,ko00002,ko01000	3.D.4.4,3.D.4.6	-	-	COX3
BYD3_k127_8607645_191	1237149.C900_03275	6.364e-33	130.0	COG5605@1|root,COG5605@2|Bacteria,4NTVI@976|Bacteroidetes,47R14@768503|Cytophagia	976|Bacteroidetes	S	Prokaryotic Cytochrome C oxidase subunit IV	-	-	-	-	-	-	-	-	-	-	-	-	COX4_pro
BYD3_k127_8607645_215	1237149.C900_03276	2.759e-06	55.0	COG1999@1|root,COG1999@2|Bacteria,4NY1A@976|Bacteroidetes	976|Bacteroidetes	S	signal sequence binding	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_8607645_144	1237149.C900_03277	3.065e-63	221.0	COG2322@1|root,COG2322@2|Bacteria,4NM5N@976|Bacteroidetes,47QB2@768503|Cytophagia	976|Bacteroidetes	S	Protein of unknown function (DUF420)	yozB	-	-	ko:K08976	-	-	-	-	ko00000	-	-	-	DUF420
BYD3_k127_8607645_204	1237149.C900_03278	1.545e-19	90.0	2E3I4@1|root,32YGK@2|Bacteria,4NUQ9@976|Bacteroidetes,47S6Z@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_8607645_197	1121957.ATVL01000006_gene3369	5.615e-27	114.0	COG5349@1|root,COG5349@2|Bacteria,4NQ87@976|Bacteroidetes,47R4M@768503|Cytophagia	976|Bacteroidetes	S	Protein of unknown function (DUF983)	-	-	-	-	-	-	-	-	-	-	-	-	DUF983
BYD3_k127_8607645_19	1237149.C900_03280	5.599e-260	843.0	COG5000@1|root,COG5000@2|Bacteria,4NE49@976|Bacteroidetes,47JEP@768503|Cytophagia	976|Bacteroidetes	T	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase	zraS_1	-	-	-	-	-	-	-	-	-	-	-	HATPase_c,HisKA
BYD3_k127_8607645_53	1237149.C900_04094	1.214e-164	529.0	COG5000@1|root,COG5000@2|Bacteria,4NEWF@976|Bacteroidetes,47JZG@768503|Cytophagia	976|Bacteroidetes	T	Histidine kinase	-	-	-	-	-	-	-	-	-	-	-	-	HATPase_c,PAS_8
BYD3_k127_8607645_24	1237149.C900_04093	2.374e-239	745.0	COG2204@1|root,COG2204@2|Bacteria,4NE89@976|Bacteroidetes,47JF9@768503|Cytophagia	976|Bacteroidetes	T	two component, sigma54 specific, transcriptional regulator, Fis family	-	-	-	-	-	-	-	-	-	-	-	-	HTH_8,Response_reg,Sigma54_activat
BYD3_k127_8607645_40	1237149.C900_04092	2.272e-182	578.0	COG0845@1|root,COG0845@2|Bacteria,4NDUH@976|Bacteroidetes,47N10@768503|Cytophagia	976|Bacteroidetes	M	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family	-	-	-	ko:K02005	-	-	-	-	ko00000	-	-	-	Biotin_lipoyl_2,HlyD_3,HlyD_D23
BYD3_k127_8607645_67	1237149.C900_04091	6.658e-136	434.0	COG1136@1|root,COG1136@2|Bacteria,4NFDW@976|Bacteroidetes,47KMI@768503|Cytophagia	976|Bacteroidetes	V	ABC transporter	-	-	-	ko:K02003	-	M00258	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	ABC_tran
BYD3_k127_8607645_26	1237149.C900_05293	4.097e-234	748.0	COG0577@1|root,COG0577@2|Bacteria,4NKYD@976|Bacteroidetes,47MU6@768503|Cytophagia	976|Bacteroidetes	V	MacB-like periplasmic core domain	-	-	-	-	-	-	-	-	-	-	-	-	FtsX,MacB_PCD
BYD3_k127_8607645_28	1239962.C943_00386	2.977e-228	731.0	COG0577@1|root,COG0577@2|Bacteria,4NDUK@976|Bacteroidetes,47JJN@768503|Cytophagia	976|Bacteroidetes	V	FtsX-like permease family	-	-	-	-	-	-	-	-	-	-	-	-	FtsX,MacB_PCD
BYD3_k127_8607645_138	1237149.C900_03615	3.614e-67	235.0	arCOG05416@1|root,2ZZTD@2|Bacteria,4NNMY@976|Bacteroidetes,47Q57@768503|Cytophagia	976|Bacteroidetes	S	lycopene cyclase	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_8607645_135	1237149.C900_03616	6.724e-69	236.0	COG3000@1|root,COG3000@2|Bacteria,4NMA9@976|Bacteroidetes,47PV8@768503|Cytophagia	976|Bacteroidetes	I	PFAM Fatty acid hydroxylase	crtZ	-	1.14.15.24	ko:K15746	ko00906,ko01100,ko01110,map00906,map01100,map01110	M00372	R07530,R07558,R07559,R07561,R07562,R07568,R07569,R07570,R07572,R07851,R09747	RC00478,RC00704,RC02629	ko00000,ko00001,ko00002,ko01000	-	-	-	FA_hydroxylase
BYD3_k127_8607645_8	1089547.KB913013_gene4651	0.0	1107.0	COG2010@1|root,COG2010@2|Bacteria,4NEPV@976|Bacteroidetes,47P04@768503|Cytophagia	976|Bacteroidetes	C	Protein of unknown function (DUF1549)	-	-	-	-	-	-	-	-	-	-	-	-	PSCyt1,PSCyt2,PSD1
BYD3_k127_8607645_18	761193.Runsl_2696	1.065e-264	820.0	COG4102@1|root,COG4102@2|Bacteria,4NE73@976|Bacteroidetes,47KYW@768503|Cytophagia	976|Bacteroidetes	S	Protein of unknown function (DUF1501)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1501
BYD3_k127_8607645_47	761193.Runsl_2695	8.638e-176	574.0	COG4886@1|root,COG4886@2|Bacteria,4NG07@976|Bacteroidetes,47P4Q@768503|Cytophagia	976|Bacteroidetes	S	Chitobiase/beta-hexosaminidase C-terminal domain	-	-	-	-	-	-	-	-	-	-	-	-	CHB_HEX_C_1,Fn3_assoc,PSCyt1
BYD3_k127_8607645_48	485918.Cpin_6960	1.061e-173	554.0	COG0415@1|root,COG0415@2|Bacteria,4NEDW@976|Bacteroidetes,1IQZJ@117747|Sphingobacteriia	976|Bacteroidetes	L	DNA photolyase	phr	-	4.1.99.3	ko:K01669	-	-	-	-	ko00000,ko01000,ko03400	-	-	-	DNA_photolyase,FAD_binding_7
BYD3_k127_8607645_142	1237149.C900_03619	4.234e-64	223.0	COG1443@1|root,COG1443@2|Bacteria,4NFJV@976|Bacteroidetes,47Q5E@768503|Cytophagia	976|Bacteroidetes	I	NUDIX domain	idi	-	5.3.3.2	ko:K01823	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	M00095,M00096,M00364,M00365,M00366,M00367	R01123	RC00455	ko00000,ko00001,ko00002,ko01000	-	-	-	NUDIX
BYD3_k127_8607645_103	269798.CHU_2036	7.636e-102	338.0	COG1562@1|root,COG1562@2|Bacteria,4NEIK@976|Bacteroidetes,47J9F@768503|Cytophagia	976|Bacteroidetes	I	PFAM Squalene phytoene synthase	crtB	-	-	-	-	-	-	-	-	-	-	-	SQS_PSY
BYD3_k127_8607645_34	1237149.C900_03621	1.17e-207	655.0	COG1233@1|root,COG1233@2|Bacteria,4NF7K@976|Bacteroidetes,47JMY@768503|Cytophagia	976|Bacteroidetes	Q	TIGRFAM phytoene desaturase	crtI	-	1.3.99.26,1.3.99.28,1.3.99.29,1.3.99.31	ko:K10027	ko00906,ko01100,ko01110,map00906,map01100,map01110	-	R04787,R04798,R04800,R09691,R09692	RC01214,RC02088,RC02605	ko00000,ko00001,ko01000	-	-	-	Amino_oxidase
BYD3_k127_8607645_175	1166018.FAES_0890	6.73e-43	162.0	COG1595@1|root,COG1595@2|Bacteria,4NMM3@976|Bacteroidetes,47KPZ@768503|Cytophagia	976|Bacteroidetes	K	Belongs to the sigma-70 factor family. ECF subfamily	sigR_3	-	-	ko:K03088	-	-	-	-	ko00000,ko03021	-	-	-	Sigma70_r2,Sigma70_r4_2
BYD3_k127_8607645_114	880070.Cycma_2041	9.783e-92	309.0	COG0789@1|root,COG5012@1|root,COG0789@2|Bacteria,COG5012@2|Bacteria,4NERC@976|Bacteroidetes,47K07@768503|Cytophagia	976|Bacteroidetes	K	PFAM MerR family regulatory protein	-	-	-	ko:K22491	-	-	-	-	ko00000,ko03000	-	-	-	B12-binding,B12-binding_2,MerR_1
BYD3_k127_8607645_5	1237149.C900_05690	0.0	1201.0	COG1201@1|root,COG1201@2|Bacteria,4NGQ0@976|Bacteroidetes,47NAU@768503|Cytophagia	976|Bacteroidetes	L	DEAD DEAH box helicase	lhr	-	-	ko:K03724	-	-	-	-	ko00000,ko01000,ko03400	-	-	-	DEAD,DEAD_assoc,Helicase_C
BYD3_k127_8607645_43	926549.KI421517_gene1035	4.333e-181	578.0	COG0306@1|root,COG0306@2|Bacteria,4NE7J@976|Bacteroidetes,47KEG@768503|Cytophagia	976|Bacteroidetes	P	phosphate transporter	-	-	-	ko:K03306	-	-	-	-	ko00000	2.A.20	-	-	PHO4
BYD3_k127_8607645_124	1237149.C900_05677	2.842e-76	261.0	COG1407@1|root,COG1407@2|Bacteria,4NMCE@976|Bacteroidetes,47QVG@768503|Cytophagia	976|Bacteroidetes	S	Calcineurin-like phosphoesterase	-	-	-	-	-	-	-	-	-	-	-	-	Metallophos
BYD3_k127_8607645_99	997884.HMPREF1068_03249	2.772e-102	344.0	COG2843@1|root,COG2843@2|Bacteria,4NGD2@976|Bacteroidetes,2FQ0M@200643|Bacteroidia,4AMPS@815|Bacteroidaceae	976|Bacteroidetes	M	Bacterial capsule synthesis protein	-	-	-	ko:K07282	-	-	-	-	ko00000	-	-	-	PGA_cap
BYD3_k127_8607645_107	153721.MYP_3597	4.352e-98	328.0	COG0697@1|root,COG0697@2|Bacteria,4NM5K@976|Bacteroidetes,47TMU@768503|Cytophagia	976|Bacteroidetes	EG	EamA-like transporter family	-	-	-	-	-	-	-	-	-	-	-	-	EamA
BYD3_k127_8607645_95	1121930.AQXG01000007_gene441	2.043e-105	353.0	COG0075@1|root,COG0075@2|Bacteria,4NH61@976|Bacteroidetes	976|Bacteroidetes	E	Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. PhnW subfamily	phnW	-	2.6.1.37	ko:K03430,ko:K09469	ko00440,ko01100,ko01120,map00440,map01100,map01120	-	R04152	RC00008,RC00062	ko00000,ko00001,ko01000,ko01007	-	-	-	Aminotran_5
BYD3_k127_8607645_160	1237149.C900_02662	7.285e-54	204.0	COG5050@1|root,COG5050@2|Bacteria	2|Bacteria	I	diacylglycerol cholinephosphotransferase activity	-	-	-	-	-	-	-	-	-	-	-	-	CDP-OH_P_transf
BYD3_k127_8607645_23	1295642.H839_06464	4.144e-244	764.0	COG1213@1|root,COG2513@1|root,COG1213@2|Bacteria,COG2513@2|Bacteria,1TQVY@1239|Firmicutes,4HCDV@91061|Bacilli,1WH75@129337|Geobacillus	91061|Bacilli	GM	Phosphoenolpyruvate phosphomutase	-	-	5.4.2.9	ko:K01841	ko00440,ko01100,ko01120,ko01130,map00440,map01100,map01120,map01130	-	R00661	RC02792	ko00000,ko00001,ko01000	-	-	-	NTP_transf_3,PEP_mutase
BYD3_k127_8607645_63	1295642.H839_06469	1.364e-147	475.0	COG0028@1|root,COG4032@1|root,COG0028@2|Bacteria,COG4032@2|Bacteria,1TSJZ@1239|Firmicutes,4HDPN@91061|Bacilli,1WH60@129337|Geobacillus	91061|Bacilli	EH	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain	-	-	4.1.1.82	ko:K09459	ko00440,ko01100,ko01120,ko01130,map00440,map01100,map01120,map01130	-	R04053	RC00506	ko00000,ko00001,ko01000	-	-	-	TPP_enzyme_C,TPP_enzyme_N
BYD3_k127_8607645_145	243275.TDE_1415	3.834e-63	225.0	COG0075@1|root,COG1213@1|root,COG0075@2|Bacteria,COG1213@2|Bacteria,2J66S@203691|Spirochaetes	203691|Spirochaetes	EM	aminotransferase class V	-	-	2.6.1.37	ko:K03430	ko00440,ko01100,ko01120,map00440,map01100,map01120	-	R04152	RC00008,RC00062	ko00000,ko00001,ko01000,ko01007	-	-	-	Aminotran_5,NTP_transf_3
BYD3_k127_8607645_37	1237149.C900_02661	6.664e-193	619.0	COG1368@1|root,COG1368@2|Bacteria,4NFI9@976|Bacteroidetes,47K4G@768503|Cytophagia	976|Bacteroidetes	M	COGs COG1368 Phosphoglycerol transferase and related protein alkaline phosphatase superfamily	ltaS2	-	-	-	-	-	-	-	-	-	-	-	Sulfatase
BYD3_k127_8607645_202	497964.CfE428DRAFT_5334	5.622e-21	101.0	COG3216@1|root,COG3216@2|Bacteria	2|Bacteria	M	Uncharacterized protein conserved in bacteria (DUF2062)	-	-	-	ko:K09928	-	-	-	-	ko00000	-	-	-	DUF2062
BYD3_k127_8607645_22	1237149.C900_02654	3.152e-251	786.0	COG1574@1|root,COG1574@2|Bacteria,4NFMV@976|Bacteroidetes,47TV8@768503|Cytophagia	976|Bacteroidetes	S	Amidohydrolase family	-	-	-	-	-	-	-	-	-	-	-	-	Amidohydro_3
BYD3_k127_8607645_165	1237149.C900_02657	5.492e-51	184.0	COG4103@1|root,COG4103@2|Bacteria,4NUAN@976|Bacteroidetes,47R5X@768503|Cytophagia	976|Bacteroidetes	S	Tellurite resistance protein TerB	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_8607645_192	1168034.FH5T_09135	2.448e-32	134.0	COG1983@1|root,COG1983@2|Bacteria,4PKK1@976|Bacteroidetes	976|Bacteroidetes	KT	Putative auto-transporter adhesin, head GIN domain	-	-	-	-	-	-	-	-	-	-	-	-	DUF2807
BYD3_k127_8607645_104	485918.Cpin_2586	5.251e-100	331.0	COG0745@1|root,COG0745@2|Bacteria,4NGVV@976|Bacteroidetes,1IPYW@117747|Sphingobacteriia	976|Bacteroidetes	K	Response regulator receiver domain	-	-	-	-	-	-	-	-	-	-	-	-	Response_reg,Trans_reg_C
BYD3_k127_8607645_106	743722.Sph21_4056	1.456e-98	336.0	COG0642@1|root,COG0642@2|Bacteria,4NEW4@976|Bacteroidetes,1IRSJ@117747|Sphingobacteriia	976|Bacteroidetes	T	His Kinase A (phosphoacceptor) domain	-	-	-	-	-	-	-	-	-	-	-	-	HATPase_c,HATPase_c_5,HisKA
BYD3_k127_8607645_16	1121481.AUAS01000007_gene1085	3.846e-276	870.0	COG1629@1|root,COG4771@2|Bacteria,4NEIG@976|Bacteroidetes,47JGS@768503|Cytophagia	976|Bacteroidetes	P	TonB-dependent Receptor Plug	-	-	-	-	-	-	-	-	-	-	-	-	CarbopepD_reg_2,CarboxypepD_reg,OMP_b-brl_3,Plug
BYD3_k127_8607645_9	1237149.C900_02668	0.0	1092.0	COG3968@1|root,COG3968@2|Bacteria,4NG2B@976|Bacteroidetes,47KK6@768503|Cytophagia	976|Bacteroidetes	S	glutamine synthetase	glnA	-	6.3.1.2	ko:K01915	ko00220,ko00250,ko00630,ko00910,ko01100,ko01120,ko01230,ko02020,ko04217,ko04724,ko04727,map00220,map00250,map00630,map00910,map01100,map01120,map01230,map02020,map04217,map04724,map04727	-	R00253	RC00010,RC02798	ko00000,ko00001,ko01000,ko04147	-	-	-	GSIII_N,Gln-synt_C
BYD3_k127_8607645_76	1121859.KB890759_gene1929	2.004e-126	422.0	COG2234@1|root,COG2234@2|Bacteria,4NEHY@976|Bacteroidetes,47NK2@768503|Cytophagia	976|Bacteroidetes	S	Peptidase, M28	-	-	-	-	-	-	-	-	-	-	-	-	PA,Peptidase_M28
BYD3_k127_8607645_123	929703.KE386491_gene3606	4.274e-77	267.0	COG1073@1|root,COG1073@2|Bacteria,4NNXQ@976|Bacteroidetes,47PV9@768503|Cytophagia	976|Bacteroidetes	S	Serine aminopeptidase, S33	-	-	-	-	-	-	-	-	-	-	-	-	Abhydrolase_1
BYD3_k127_8607645_32	1237149.C900_02674	1.836e-215	681.0	COG0793@1|root,COG0793@2|Bacteria,4NDWU@976|Bacteroidetes,47JTG@768503|Cytophagia	976|Bacteroidetes	M	Belongs to the peptidase S41A family	prc	-	3.4.21.102	ko:K03797	-	-	-	-	ko00000,ko01000,ko01002	-	-	-	PDZ_2,Peptidase_S41
BYD3_k127_8607645_38	929703.KE386491_gene3868	5.084e-191	600.0	COG2355@1|root,COG2355@2|Bacteria,4NDYZ@976|Bacteroidetes,47JHU@768503|Cytophagia	976|Bacteroidetes	E	PFAM Peptidase M19, renal dipeptidase	-	-	3.4.13.19	ko:K01273	-	-	-	-	ko00000,ko00537,ko01000,ko01002,ko04147	-	-	-	Peptidase_M19
BYD3_k127_8607645_87	865937.Gilli_3258	1.232e-115	374.0	COG1657@1|root,COG1657@2|Bacteria,4NFMT@976|Bacteroidetes,1HZJA@117743|Flavobacteriia,2P7AT@244698|Gillisia	976|Bacteroidetes	I	Domain of unknown function (DUF4159)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4159
BYD3_k127_8607645_33	1358423.N180_02330	6.616e-214	671.0	COG0312@1|root,COG0312@2|Bacteria,4NE1F@976|Bacteroidetes,1IPHR@117747|Sphingobacteriia	976|Bacteroidetes	S	Putative modulator of DNA gyrase	-	-	-	ko:K03592	-	-	-	-	ko00000,ko01002	-	-	-	PmbA_TldD
BYD3_k127_8607645_14	1408813.AYMG01000017_gene5626	1.271e-300	930.0	COG0312@1|root,COG0312@2|Bacteria,4NG2Y@976|Bacteroidetes	976|Bacteroidetes	S	Peptidase U62 modulator of DNA gyrase	tldD1	-	-	ko:K03568	-	-	-	-	ko00000,ko01002	-	-	-	PmbA_TldD
BYD3_k127_8607645_35	1237149.C900_01432	1.643e-201	635.0	COG0312@1|root,COG0312@2|Bacteria,4NE1F@976|Bacteroidetes,47N7M@768503|Cytophagia	976|Bacteroidetes	S	Peptidase U62 modulator of DNA gyrase	tldD3	-	-	ko:K03592	-	-	-	-	ko00000,ko01002	-	-	-	PmbA_TldD
BYD3_k127_8607645_15	865937.Gilli_3256	2.835e-281	872.0	COG0312@1|root,COG0312@2|Bacteria,4NG2Y@976|Bacteroidetes,1HZ08@117743|Flavobacteriia,2P7EQ@244698|Gillisia	976|Bacteroidetes	S	Putative modulator of DNA gyrase	tldD1	-	-	ko:K03568	-	-	-	-	ko00000,ko01002	-	-	-	PmbA_TldD
BYD3_k127_8607645_20	929562.Emtol_2283	4.668e-255	790.0	COG0439@1|root,COG0439@2|Bacteria,4NFEQ@976|Bacteroidetes,47MHE@768503|Cytophagia	976|Bacteroidetes	I	TIGRFAM acetyl-CoA carboxylase, biotin carboxylase	accC	-	6.3.4.14,6.4.1.2	ko:K01961	ko00061,ko00620,ko00640,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00061,map00620,map00640,map00720,map01100,map01110,map01120,map01130,map01200,map01212	M00082,M00376	R00742,R04385	RC00040,RC00253,RC00367	ko00000,ko00001,ko00002,ko01000	-	-	-	Biotin_carb_C,Biotin_carb_N,CPSase_L_D2
BYD3_k127_8607645_156	1237149.C900_00629	1.811e-56	203.0	COG0511@1|root,COG0511@2|Bacteria,4NM8U@976|Bacteroidetes,47PSK@768503|Cytophagia	976|Bacteroidetes	I	first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA	accB	-	-	ko:K02160	ko00061,ko00620,ko00640,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00061,map00620,map00640,map00720,map01100,map01110,map01120,map01130,map01200,map01212	M00082,M00376	R00742	RC00040,RC00367	ko00000,ko00001,ko00002	-	-	-	Biotin_lipoyl
BYD3_k127_8607645_133	269798.CHU_1531	4.169e-70	241.0	COG0231@1|root,COG0231@2|Bacteria,4NDXA@976|Bacteroidetes,47MZS@768503|Cytophagia	976|Bacteroidetes	J	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase	efp	GO:0003674,GO:0003676,GO:0003723,GO:0003746,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006412,GO:0006414,GO:0006518,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576	-	ko:K02356	-	-	-	-	ko00000,ko03012	-	-	-	EFP,EFP_N,Elong-fact-P_C
BYD3_k127_8607645_56	866536.Belba_2433	1.232e-158	507.0	COG0332@1|root,COG0332@2|Bacteria,4NEYH@976|Bacteroidetes,47KV4@768503|Cytophagia	976|Bacteroidetes	I	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids	fabH	GO:0003674,GO:0003824,GO:0006082,GO:0006629,GO:0006631,GO:0008150,GO:0008152,GO:0009987,GO:0016740,GO:0016746,GO:0016747,GO:0019752,GO:0032787,GO:0033818,GO:0043436,GO:0044237,GO:0044238,GO:0044255,GO:0044281,GO:0071704	2.3.1.180	ko:K00648	ko00061,ko01100,ko01212,map00061,map01100,map01212	M00082,M00083	R10707	RC00004,RC02729,RC02888	ko00000,ko00001,ko00002,ko01000,ko01004	-	-	-	ACP_syn_III,ACP_syn_III_C
BYD3_k127_8607645_194	1237149.C900_00633	5.966e-29	116.0	COG0333@1|root,COG0333@2|Bacteria,4NUXU@976|Bacteroidetes,47S89@768503|Cytophagia	976|Bacteroidetes	J	Belongs to the bacterial ribosomal protein bL32 family	rpmF	-	-	ko:K02911	ko03010,map03010	M00178	-	-	br01610,ko00000,ko00001,ko00002,ko03011,ko03029	-	-	-	Ribosomal_L32p
BYD3_k127_8607645_171	153721.MYP_2198	2.513e-46	172.0	COG1399@1|root,COG1399@2|Bacteria,4NMQT@976|Bacteroidetes,47QNM@768503|Cytophagia	976|Bacteroidetes	S	Uncharacterized ACR, COG1399	-	-	-	-	-	-	-	-	-	-	-	-	DUF177
BYD3_k127_8607645_182	1237149.C900_00635	1.641e-37	145.0	COG4103@1|root,COG4103@2|Bacteria,4NUAN@976|Bacteroidetes,47R5X@768503|Cytophagia	976|Bacteroidetes	S	Tellurite resistance protein TerB	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_8607645_71	1237149.C900_00636	4.096e-132	429.0	COG1995@1|root,COG1995@2|Bacteria,4NEUR@976|Bacteroidetes,47MC9@768503|Cytophagia	976|Bacteroidetes	H	Belongs to the PdxA family	pdxA	-	1.1.1.262	ko:K00097	ko00750,ko01100,map00750,map01100	M00124	R05681,R05837,R07406	RC00089,RC00675,RC01475	ko00000,ko00001,ko00002,ko01000	-	-	-	PdxA
BYD3_k127_8607645_115	1237149.C900_00637	5.694e-91	308.0	COG0030@1|root,COG0030@2|Bacteria,4NERB@976|Bacteroidetes,47KWT@768503|Cytophagia	976|Bacteroidetes	J	Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits	ksgA	-	2.1.1.182	ko:K02528	-	-	R10716	RC00003,RC03257	ko00000,ko01000,ko03009	-	-	-	RrnaAD
BYD3_k127_8607645_54	643867.Ftrac_3194	3.472e-163	525.0	COG2239@1|root,COG2239@2|Bacteria,4NGGN@976|Bacteroidetes,47JTX@768503|Cytophagia	976|Bacteroidetes	P	Acts as a magnesium transporter	mgtE	-	-	ko:K06213	-	-	-	-	ko00000,ko02000	1.A.26.1	-	-	CBS,MgtE,MgtE_N
BYD3_k127_8607645_94	504472.Slin_0324	7.095e-108	358.0	COG0111@1|root,COG0111@2|Bacteria,4NEMQ@976|Bacteroidetes,47K6J@768503|Cytophagia	976|Bacteroidetes	EH	D-isomer specific 2-hydroxyacid dehydrogenase	serA	-	1.1.1.399,1.1.1.95	ko:K00058	ko00260,ko00680,ko01100,ko01120,ko01130,ko01200,ko01230,map00260,map00680,map01100,map01120,map01130,map01200,map01230	M00020	R01513	RC00031	ko00000,ko00001,ko00002,ko01000,ko04147	-	-	-	2-Hacid_dh,2-Hacid_dh_C
BYD3_k127_8607645_66	1237149.C900_00640	3.866e-137	440.0	COG1357@1|root,COG1357@2|Bacteria,4NY1Q@976|Bacteroidetes,47WKP@768503|Cytophagia	976|Bacteroidetes	S	Pentapeptide repeats (9 copies)	-	-	-	-	-	-	-	-	-	-	-	-	Pentapeptide
BYD3_k127_8607645_141	1237149.C900_00641	3.093e-65	226.0	COG0782@1|root,COG0782@2|Bacteria,4NNH6@976|Bacteroidetes,47P7N@768503|Cytophagia	976|Bacteroidetes	K	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides	greA	-	-	ko:K03624	-	-	-	-	ko00000,ko03021	-	-	-	GreA_GreB,GreA_GreB_N
BYD3_k127_8607645_148	1237149.C900_00642	1.653e-60	211.0	COG0537@1|root,COG0537@2|Bacteria,4NQ4X@976|Bacteroidetes,47Q95@768503|Cytophagia	976|Bacteroidetes	FG	HIT family hydrolase	hinT	-	-	ko:K02503	-	-	-	-	ko00000,ko04147	-	-	-	HIT
BYD3_k127_8607645_39	1237149.C900_01604	2.977e-183	581.0	COG0126@1|root,COG0126@2|Bacteria,4NFW2@976|Bacteroidetes,47K8V@768503|Cytophagia	976|Bacteroidetes	G	Belongs to the phosphoglycerate kinase family	pgk	-	2.7.2.3	ko:K00927	ko00010,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00710,map01100,map01110,map01120,map01130,map01200,map01230	M00001,M00002,M00003,M00165,M00166,M00308,M00552	R01512	RC00002,RC00043	ko00000,ko00001,ko00002,ko01000,ko04147	-	-	-	PGK
BYD3_k127_8607645_46	1189612.A33Q_0936	8.445e-176	556.0	COG0205@1|root,COG0205@2|Bacteria,4NGN7@976|Bacteroidetes,47TRF@768503|Cytophagia	976|Bacteroidetes	F	Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis	pfkA	-	2.7.1.11,2.7.1.90	ko:K21071	ko00010,ko00030,ko00051,ko00052,ko00680,ko01100,ko01110,ko01120,ko01130,map00010,map00030,map00051,map00052,map00680,map01100,map01110,map01120,map01130	-	R00756,R00764,R02073,R03236,R04779	RC00002,RC00017	ko00000,ko00001,ko01000	-	-	-	PFK
BYD3_k127_8607645_84	1123057.P872_16800	2.891e-117	385.0	COG0009@1|root,COG0009@2|Bacteria,4NF5U@976|Bacteroidetes,47KX9@768503|Cytophagia	976|Bacteroidetes	J	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine	sua5	-	2.7.7.87	ko:K07566	-	-	R10463	RC00745	ko00000,ko01000,ko03009,ko03016	-	-	-	SUA5,Sua5_yciO_yrdC
BYD3_k127_8607645_74	929703.KE386491_gene3004	8.958e-129	419.0	COG2367@1|root,COG2367@2|Bacteria,4NDYP@976|Bacteroidetes,47MZ5@768503|Cytophagia	976|Bacteroidetes	V	Beta-lactamase enzyme family	-	-	3.5.2.6	ko:K17836	ko00311,ko01130,ko01501,map00311,map01130,map01501	M00627,M00628	R06363	RC01499	ko00000,ko00001,ko00002,ko01000,ko01504	-	-	-	Beta-lactamase2
BYD3_k127_8607645_64	1239962.C943_00983	2.775e-145	471.0	COG0025@1|root,COG0025@2|Bacteria,4NM79@976|Bacteroidetes,47U8Y@768503|Cytophagia	976|Bacteroidetes	P	Sodium/hydrogen exchanger family	-	-	-	-	-	-	-	-	-	-	-	-	Na_H_Exchanger
BYD3_k127_8607645_30	866536.Belba_1914	6.359e-221	693.0	COG0017@1|root,COG0017@2|Bacteria,4NDY4@976|Bacteroidetes,47JG8@768503|Cytophagia	976|Bacteroidetes	J	Asparaginyl-tRNA synthetase	asnS	-	6.1.1.22	ko:K01893	ko00970,map00970	M00359,M00360	R03648	RC00055,RC00523	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	-	-	-	tRNA-synt_2,tRNA_anti-codon
BYD3_k127_8607645_31	1237149.C900_03991	1.405e-219	690.0	COG1508@1|root,COG1508@2|Bacteria,4NE5B@976|Bacteroidetes,47KC2@768503|Cytophagia	976|Bacteroidetes	K	RNA polymerase, sigma-54 factor	rpoN	-	-	ko:K03092	ko02020,ko05111,map02020,map05111	-	-	-	ko00000,ko00001,ko03021	-	-	-	Sigma54_AID,Sigma54_CBD,Sigma54_DBD
BYD3_k127_8607645_181	1237149.C900_03992	6.495e-38	149.0	COG0671@1|root,COG0671@2|Bacteria,4NUPJ@976|Bacteroidetes,47PT7@768503|Cytophagia	976|Bacteroidetes	I	phosphoesterase, PA-phosphatase related	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_8607645_151	290317.Cpha266_1928	1.46e-59	215.0	COG3015@1|root,COG3187@1|root,COG3015@2|Bacteria,COG3187@2|Bacteria	2|Bacteria	O	response to heat	-	-	-	ko:K03668,ko:K09914	-	-	-	-	ko00000	-	-	-	META,NlpE
BYD3_k127_8607645_45	1237149.C900_04785	8.032e-176	557.0	COG2204@1|root,COG2204@2|Bacteria,4NE89@976|Bacteroidetes,47JKI@768503|Cytophagia	976|Bacteroidetes	T	CheY-like receiver AAA-type ATPase and DNA-binding domains	ntrX	-	-	-	-	-	-	-	-	-	-	-	HTH_8,Response_reg,Sigma54_activat
BYD3_k127_8607645_216	435591.BDI_0358	6.058e-06	51.0	2C5FT@1|root,33K3C@2|Bacteria,4NZJR@976|Bacteroidetes,2FVX2@200643|Bacteroidia,23169@171551|Porphyromonadaceae	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_8607645_187	1237149.C900_04104	7.206e-35	137.0	2E6VI@1|root,331F4@2|Bacteria,4NWUI@976|Bacteroidetes,47T84@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_8607645_112	313606.M23134_00725	8.967e-94	316.0	COG5544@1|root,COG5544@2|Bacteria,4NGNB@976|Bacteroidetes,47JQY@768503|Cytophagia	976|Bacteroidetes	S	Predicted periplasmic lipoprotein (DUF2279)	-	-	-	-	-	-	-	-	-	-	-	-	DUF2279
BYD3_k127_8607645_4	1237149.C900_04102	0.0	1213.0	COG2911@1|root,COG2911@2|Bacteria,4NF7F@976|Bacteroidetes,47KQP@768503|Cytophagia	976|Bacteroidetes	S	PFAM Family of	-	-	-	-	-	-	-	-	-	-	-	-	TamB
BYD3_k127_8607645_55	1237149.C900_04101	2.827e-159	508.0	COG0533@1|root,COG0533@2|Bacteria,4NE8E@976|Bacteroidetes,47JX0@768503|Cytophagia	976|Bacteroidetes	O	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction	tsaD	GO:0000408,GO:0002949,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0032991,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0070525,GO:0071704,GO:0090304,GO:1901360	2.3.1.234	ko:K01409	-	-	R10648	RC00070,RC00416	ko00000,ko01000,ko03016	-	-	-	Peptidase_M22
BYD3_k127_8607645_143	1237149.C900_04099	2.242e-63	221.0	COG0691@1|root,COG0691@2|Bacteria,4NNJU@976|Bacteroidetes,47PRC@768503|Cytophagia	976|Bacteroidetes	J	the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA	smpB	-	-	ko:K03664	-	-	-	-	ko00000	-	-	-	SmpB
BYD3_k127_8607645_100	643867.Ftrac_0059	3.341e-102	338.0	COG0791@1|root,COG0791@2|Bacteria,4NE2T@976|Bacteroidetes,47PND@768503|Cytophagia	976|Bacteroidetes	M	Cell wall-associated hydrolase (invasion-associated protein)	ykfC	-	-	-	-	-	-	-	-	-	-	-	NLPC_P60,SH3_3
BYD3_k127_8607645_146	1185876.BN8_05686	1.31e-61	218.0	COG1403@1|root,COG1403@2|Bacteria,4NJ0T@976|Bacteroidetes,47MEF@768503|Cytophagia	976|Bacteroidetes	L	HNH endonuclease	-	-	-	-	-	-	-	-	-	-	-	-	HNH,HNH_5
BYD3_k127_8607645_90	485918.Cpin_1988	9.669e-110	360.0	COG1028@1|root,COG1028@2|Bacteria,4NH6Y@976|Bacteroidetes,1IQBS@117747|Sphingobacteriia	976|Bacteroidetes	IQ	short-chain dehydrogenase	-	-	-	-	-	-	-	-	-	-	-	-	adh_short_C2
BYD3_k127_8607645_68	762903.Pedsa_0485	1.94e-135	436.0	COG0179@1|root,COG0179@2|Bacteria,4NFMZ@976|Bacteroidetes,1IPCE@117747|Sphingobacteriia	976|Bacteroidetes	Q	PFAM Fumarylacetoacetate (FAA) hydrolase family	-	-	-	-	-	-	-	-	-	-	-	-	FAA_hydrolase
BYD3_k127_8607645_89	485918.Cpin_1994	1.523e-110	371.0	COG0738@1|root,COG0738@2|Bacteria,4NEYR@976|Bacteroidetes,1INV5@117747|Sphingobacteriia	976|Bacteroidetes	G	PFAM Major Facilitator Superfamily	-	-	-	ko:K02429	-	-	-	-	ko00000,ko02000	2.A.1.7	-	-	MFS_1
BYD3_k127_8607645_96	1121904.ARBP01000004_gene1067	1.53e-103	372.0	COG0457@1|root,COG4995@1|root,COG0457@2|Bacteria,COG4995@2|Bacteria,4NHCZ@976|Bacteroidetes	976|Bacteroidetes	K	COG0457 FOG TPR repeat	-	-	-	-	-	-	-	-	-	-	-	-	CHAT,TPR_12
BYD3_k127_8607645_199	1392490.JHZX01000001_gene1453	5.293e-25	113.0	COG0457@1|root,COG0457@2|Bacteria,4NQ3P@976|Bacteroidetes,1I2ED@117743|Flavobacteriia	976|Bacteroidetes	S	COG0457 FOG TPR repeat	-	-	-	-	-	-	-	-	-	-	-	-	TPR_6
BYD3_k127_8607645_177	1121859.KB890759_gene1874	3.955e-40	156.0	COG1595@1|root,COG1595@2|Bacteria,4NTAA@976|Bacteroidetes,47SFT@768503|Cytophagia	976|Bacteroidetes	K	COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog	-	-	-	-	-	-	-	-	-	-	-	-	Sigma70_r2
BYD3_k127_8607645_209	980584.AFPB01000142_gene1242	8.67e-13	70.0	COG2197@1|root,COG2197@2|Bacteria,4NKX7@976|Bacteroidetes,1I9XK@117743|Flavobacteriia,4070F@61432|unclassified Flavobacteriaceae	976|Bacteroidetes	T	helix_turn_helix, Lux Regulon	-	-	-	-	-	-	-	-	-	-	-	-	GerE,Response_reg
BYD3_k127_8607645_174	1123277.KB893200_gene6382	3.506e-43	167.0	COG1309@1|root,COG1309@2|Bacteria,4NNK5@976|Bacteroidetes,47PWM@768503|Cytophagia	976|Bacteroidetes	K	Bacterial regulatory proteins, tetR family	-	-	-	-	-	-	-	-	-	-	-	-	TetR_C_13,TetR_N
BYD3_k127_8607645_44	1121373.KB903638_gene912	6.058e-178	566.0	COG0304@1|root,COG0304@2|Bacteria,4NDVU@976|Bacteroidetes,47K25@768503|Cytophagia	976|Bacteroidetes	I	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP	-	-	2.3.1.179	ko:K09458	ko00061,ko00780,ko01100,ko01212,map00061,map00780,map01100,map01212	M00083,M00572	R04355,R04726,R04952,R04957,R04960,R04963,R04968,R07762,R10115,R10119	RC00039,RC02728,RC02729,RC02888	ko00000,ko00001,ko00002,ko01000,ko01004	-	-	-	Ketoacyl-synt_C,ketoacyl-synt
BYD3_k127_8607645_85	1237149.C900_03288	4.503e-116	378.0	COG1127@1|root,COG1127@2|Bacteria,4NETG@976|Bacteroidetes,47K20@768503|Cytophagia	976|Bacteroidetes	Q	ABC-type transport system involved in resistance to organic solvents, ATPase component	metN	-	-	ko:K02065	ko02010,map02010	M00210,M00669,M00670	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.27	-	-	ABC_tran
BYD3_k127_8607645_98	1237149.C900_03289	5.858e-103	340.0	COG0767@1|root,COG0767@2|Bacteria,4NEZ8@976|Bacteroidetes,47N59@768503|Cytophagia	976|Bacteroidetes	Q	ABC-type transport system involved in resistance to organic solvents permease component	mlaE	-	-	ko:K02066	ko02010,map02010	M00210,M00669,M00670	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.27	-	-	MlaE
BYD3_k127_8607645_117	1048983.EL17_04195	1.512e-85	295.0	COG4221@1|root,COG4221@2|Bacteria,4NG8J@976|Bacteroidetes,47M5I@768503|Cytophagia	976|Bacteroidetes	S	Belongs to the short-chain dehydrogenases reductases (SDR) family	-	-	-	-	-	-	-	-	-	-	-	-	adh_short
BYD3_k127_8607645_12	643867.Ftrac_0021	7.767e-321	992.0	COG0821@1|root,COG0821@2|Bacteria,4NE63@976|Bacteroidetes,47KGW@768503|Cytophagia	976|Bacteroidetes	I	Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate	ispG	GO:0003674,GO:0003824,GO:0006081,GO:0006082,GO:0006090,GO:0006629,GO:0006644,GO:0006720,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0008654,GO:0009058,GO:0009240,GO:0009987,GO:0016491,GO:0016725,GO:0019288,GO:0019637,GO:0019682,GO:0019752,GO:0032787,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0046429,GO:0046490,GO:0052592,GO:0055114,GO:0071704,GO:0090407,GO:1901135,GO:1901576	1.17.7.1,1.17.7.3	ko:K03526	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	M00096	R08689,R10859	RC01486	ko00000,ko00001,ko00002,ko01000	-	-	-	GcpE
BYD3_k127_8607645_205	1279009.ADICEAN_04149	7.554e-18	85.0	2EGC0@1|root,33A3T@2|Bacteria,4NXPB@976|Bacteroidetes,47SUC@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_8607645_176	153721.MYP_4730	3.372e-42	157.0	COG2315@1|root,COG2315@2|Bacteria,4NS6J@976|Bacteroidetes,47R6I@768503|Cytophagia	976|Bacteroidetes	S	YjbR	-	-	-	-	-	-	-	-	-	-	-	-	YjbR
BYD3_k127_8607645_102	743722.Sph21_1713	4.052e-102	336.0	COG0586@1|root,COG0586@2|Bacteria,4NHQA@976|Bacteroidetes,1IR8N@117747|Sphingobacteriia	976|Bacteroidetes	S	PFAM SNARE associated Golgi protein	-	-	-	ko:K03975	-	-	-	-	ko00000	-	-	-	SNARE_assoc
BYD3_k127_8607645_57	880070.Cycma_2723	5.118e-155	499.0	28JXN@1|root,2Z9N3@2|Bacteria,4NJUA@976|Bacteroidetes,47NJF@768503|Cytophagia	976|Bacteroidetes	S	Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella	-	-	-	-	-	-	-	-	-	-	-	-	FG-GAP,VCBS
BYD3_k127_8607645_125	1123057.P872_02750	4.166e-76	261.0	COG2135@1|root,COG2135@2|Bacteria,4NKPN@976|Bacteroidetes,47MR7@768503|Cytophagia	976|Bacteroidetes	S	Belongs to the SOS response-associated peptidase family	-	-	-	-	-	-	-	-	-	-	-	-	SRAP
BYD3_k127_8607645_73	1237149.C900_00609	7.171e-131	426.0	COG0429@1|root,COG0429@2|Bacteria,4NFGZ@976|Bacteroidetes,47JJP@768503|Cytophagia	976|Bacteroidetes	S	Alpha beta hydrolase	-	-	-	ko:K07019	-	-	-	-	ko00000	-	-	-	Abhydrolase_1,Hydrolase_4
BYD3_k127_8607645_157	946077.W5A_08949	2.664e-56	201.0	COG2318@1|root,COG2318@2|Bacteria,4NNQI@976|Bacteroidetes,1I28A@117743|Flavobacteriia	976|Bacteroidetes	S	DinB superfamily	yfiT	-	-	-	-	-	-	-	-	-	-	-	DinB_2
BYD3_k127_8607645_121	926556.Echvi_1134	7.197e-80	274.0	COG0861@1|root,COG0861@2|Bacteria,4NFFD@976|Bacteroidetes,47MB3@768503|Cytophagia	976|Bacteroidetes	P	PFAM Integral membrane protein TerC	-	-	-	-	-	-	-	-	-	-	-	-	TerC
BYD3_k127_8607645_62	1237149.C900_04422	4.2e-151	492.0	28KMN@1|root,2ZA61@2|Bacteria,4NJ9P@976|Bacteroidetes,47P0N@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	DUF4062
BYD3_k127_8607645_13	1237149.C900_04420	2.714e-315	983.0	COG0457@1|root,COG0823@1|root,COG2885@1|root,COG0457@2|Bacteria,COG0823@2|Bacteria,COG2885@2|Bacteria,4P15I@976|Bacteroidetes,47X8A@768503|Cytophagia	976|Bacteroidetes	MU	OmpA family	-	-	-	-	-	-	-	-	-	-	-	-	OmpA,PD40
BYD3_k127_8607645_65	1237149.C900_01560	3.727e-139	454.0	COG0809@1|root,COG0809@2|Bacteria,4NDZ5@976|Bacteroidetes,47KMT@768503|Cytophagia	976|Bacteroidetes	J	Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)	queA	-	2.4.99.17	ko:K07568	-	-	-	-	ko00000,ko01000,ko03016	-	-	-	Queuosine_synth
BYD3_k127_8607645_83	1123277.KB893189_gene5230	1.58e-119	394.0	COG4948@1|root,COG4948@2|Bacteria,4NEBX@976|Bacteroidetes,47KCD@768503|Cytophagia	976|Bacteroidetes	M	PFAM Mandelate racemase muconate lactonizing enzyme, C-terminal domain	menC	-	-	-	-	-	-	-	-	-	-	-	MR_MLE_C
BYD3_k127_8607645_184	1123277.KB893194_gene5828	1.244e-36	142.0	2C87P@1|root,32H7J@2|Bacteria,4NS7S@976|Bacteroidetes,47R39@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	DoxX_2
BYD3_k127_8607645_113	643867.Ftrac_0458	1.89e-92	313.0	COG3781@1|root,COG3781@2|Bacteria,4NEB1@976|Bacteroidetes,47N85@768503|Cytophagia	976|Bacteroidetes	S	Bestrophin, RFP-TM, chloride channel	-	-	-	ko:K08994	-	-	-	-	ko00000,ko02000	1.A.46.2	-	-	Bestrophin
BYD3_k127_8607645_60	1237149.C900_00643	1.557e-151	487.0	COG0240@1|root,COG0240@2|Bacteria,4NF4R@976|Bacteroidetes,47K3D@768503|Cytophagia	976|Bacteroidetes	I	PFAM NAD-dependent glycerol-3-phosphate dehydrogenase	gpsA	-	1.1.1.94	ko:K00057	ko00564,ko01110,map00564,map01110	-	R00842,R00844	RC00029	ko00000,ko00001,ko01000	-	-	-	NAD_Gly3P_dh_C,NAD_Gly3P_dh_N
BYD3_k127_8607645_25	1237149.C900_00644	3.174e-236	742.0	COG2937@1|root,COG2937@2|Bacteria,4NK5H@976|Bacteroidetes,47M20@768503|Cytophagia	976|Bacteroidetes	I	Belongs to the GPAT DAPAT family	plsB	-	2.3.1.15	ko:K00631	ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110	M00089	R00851,R09380	RC00004,RC00039,RC00041	ko00000,ko00001,ko00002,ko01000,ko01004	-	-	-	Acyltransferase
BYD3_k127_8607645_201	1356852.N008_11790	3.168e-21	96.0	2E35A@1|root,32Y59@2|Bacteria,4NVFH@976|Bacteroidetes,47S3U@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_8655768_36	563040.Saut_0521	2.692e-15	77.0	COG2259@1|root,COG2259@2|Bacteria,1MZC7@1224|Proteobacteria,42TW9@68525|delta/epsilon subdivisions,2YPY5@29547|Epsilonproteobacteria	29547|Epsilonproteobacteria	S	DoxX	-	-	-	ko:K15977	-	-	-	-	ko00000	-	-	-	DoxX
BYD3_k127_8655768_6	1237149.C900_04771	4.305e-218	685.0	COG1057@1|root,COG1057@2|Bacteria,4NEIR@976|Bacteroidetes,47KX5@768503|Cytophagia	976|Bacteroidetes	H	Nicotinate-nucleotide adenylyltransferase	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_8655768_15	1237149.C900_04657	1.318e-151	492.0	COG0733@1|root,COG0733@2|Bacteria,4NGQ5@976|Bacteroidetes,47NFV@768503|Cytophagia	976|Bacteroidetes	U	Belongs to the sodium neurotransmitter symporter (SNF) (TC 2.A.22) family	-	-	-	ko:K03308	-	-	-	-	ko00000	2.A.22.4,2.A.22.5	-	-	SNF
BYD3_k127_8655768_32	1237149.C900_04776	1.429e-40	154.0	COG4103@1|root,COG4103@2|Bacteria,4NUAN@976|Bacteroidetes,47R5X@768503|Cytophagia	976|Bacteroidetes	S	Tellurite resistance protein TerB	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_8655768_3	1237149.C900_04780	1.888e-253	792.0	COG0318@1|root,COG0318@2|Bacteria,4NFPF@976|Bacteroidetes,47K1E@768503|Cytophagia	976|Bacteroidetes	IQ	Acyl-CoA synthetase (AMP-forming) AMP-acid ligase II	-	-	6.2.1.3	ko:K01897	ko00061,ko00071,ko01100,ko01212,ko02024,ko03320,ko04146,ko04216,ko04714,ko04920,map00061,map00071,map01100,map01212,map02024,map03320,map04146,map04216,map04714,map04920	M00086	R01280	RC00004,RC00014	ko00000,ko00001,ko00002,ko01000,ko01004,ko04147	4.C.1.1	-	-	AMP-binding,AMP-binding_C
BYD3_k127_8655768_27	1237149.C900_05665	2.519e-72	246.0	COG1522@1|root,COG1522@2|Bacteria,4NHG9@976|Bacteroidetes,47PXD@768503|Cytophagia	976|Bacteroidetes	K	helix_turn_helix ASNC type	asnC	-	-	ko:K03718	-	-	-	-	ko00000,ko03000	-	-	-	AsnC_trans_reg,HTH_24,HTH_AsnC-type
BYD3_k127_8655768_1	1237149.C900_05664	7.535e-288	886.0	COG0719@1|root,COG0719@2|Bacteria,4NFXH@976|Bacteroidetes,47JZJ@768503|Cytophagia	976|Bacteroidetes	O	TIGRFAM FeS assembly protein SufB	sufB	-	-	ko:K09014	-	-	-	-	ko00000	-	-	-	UPF0051
BYD3_k127_8655768_19	1279009.ADICEAN_00963	9.388e-130	420.0	COG0396@1|root,COG0396@2|Bacteria,4NEMY@976|Bacteroidetes,47N88@768503|Cytophagia	976|Bacteroidetes	O	TIGRFAM FeS assembly ATPase SufC	sufC	-	-	ko:K09013	-	-	-	-	ko00000,ko02000	-	-	-	ABC_tran
BYD3_k127_8655768_18	1237149.C900_05661	1.95e-132	435.0	COG0719@1|root,COG0719@2|Bacteria,4NFPG@976|Bacteroidetes,47K0R@768503|Cytophagia	976|Bacteroidetes	O	TIGRFAM FeS assembly protein SufD	sufD	-	-	ko:K09015	-	-	-	-	ko00000	-	-	-	UPF0051
BYD3_k127_8655768_9	1305737.JAFX01000001_gene1779	9.843e-181	574.0	COG0520@1|root,COG0520@2|Bacteria,4NDUB@976|Bacteroidetes,47JNS@768503|Cytophagia	976|Bacteroidetes	E	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine	sufS	-	2.8.1.7,4.4.1.16	ko:K11717	ko00450,ko01100,map00450,map01100	-	R03599,R11528	RC00961,RC01789,RC02313	ko00000,ko00001,ko01000	-	-	-	Aminotran_5
BYD3_k127_8655768_29	1237149.C900_05659	2.73e-60	211.0	COG2166@1|root,COG2166@2|Bacteria,4NM9N@976|Bacteroidetes,47Q7A@768503|Cytophagia	976|Bacteroidetes	S	SufE protein probably involved in Fe-S center assembly	sufE	-	-	ko:K02426	-	-	-	-	ko00000	-	-	-	SufE
BYD3_k127_8655768_30	1279009.ADICEAN_00968	3.38e-48	174.0	COG2151@1|root,COG2151@2|Bacteria,4NSA9@976|Bacteroidetes,47QBC@768503|Cytophagia	976|Bacteroidetes	S	FeS assembly SUF system protein	yitW	-	-	-	-	-	-	-	-	-	-	-	FeS_assembly_P
BYD3_k127_8655768_28	643867.Ftrac_0913	5.395e-67	229.0	28NYH@1|root,2ZBVN@2|Bacteria,4NMB2@976|Bacteroidetes,47QD1@768503|Cytophagia	976|Bacteroidetes	S	Belongs to the UPF0403 family	yqiW	-	-	-	-	-	-	-	-	-	-	-	Disulph_isomer
BYD3_k127_8655768_14	1519464.HY22_00855	9.041e-154	502.0	COG0025@1|root,COG0025@2|Bacteria,1FFIB@1090|Chlorobi	1090|Chlorobi	P	Sodium/hydrogen exchanger family	-	-	-	-	-	-	-	-	-	-	-	-	Na_H_Exchanger
BYD3_k127_8655768_17	1237149.C900_00327	1.159e-133	432.0	COG0451@1|root,COG0451@2|Bacteria,4NGE6@976|Bacteroidetes,47K64@768503|Cytophagia	976|Bacteroidetes	M	Male sterility protein	-	-	5.1.3.2	ko:K01784	ko00052,ko00520,ko01100,map00052,map00520,map01100	M00361,M00362,M00632	R00291,R02984	RC00289	ko00000,ko00001,ko00002,ko01000	-	-	-	Epimerase
BYD3_k127_8655768_22	1237149.C900_00326	1.122e-115	374.0	COG0175@1|root,COG0175@2|Bacteria,4NGVI@976|Bacteroidetes,47KPR@768503|Cytophagia	976|Bacteroidetes	EH	Reduction of activated sulfate into sulfite	cysH	-	1.8.4.10,1.8.4.8	ko:K00390	ko00920,ko01100,ko01120,map00920,map01100,map01120	M00176	R02021	RC00007,RC02862	ko00000,ko00001,ko00002,ko01000	-	-	-	PAPS_reduct
BYD3_k127_8655768_33	504487.JCM19302_3076	2.184e-31	127.0	COG0720@1|root,COG0720@2|Bacteria,4NNIS@976|Bacteroidetes,1I1ZF@117743|Flavobacteriia	976|Bacteroidetes	H	synthase	ygcM	-	4.1.2.50,4.2.3.12	ko:K01737	ko00790,ko01100,map00790,map01100	M00842,M00843	R04286,R09959	RC01117,RC02846,RC02847	ko00000,ko00001,ko00002,ko01000,ko03016	-	-	-	PTPS
BYD3_k127_8655768_23	1237149.C900_00316	1.577e-109	357.0	COG0302@1|root,COG0302@2|Bacteria,4NFC2@976|Bacteroidetes,47MMS@768503|Cytophagia	976|Bacteroidetes	H	TIGRFAM GTP cyclohydrolase I	folE	-	3.5.4.16	ko:K01495	ko00790,ko01100,map00790,map01100	M00126,M00841,M00842,M00843	R00428,R04639,R05046,R05048	RC00263,RC00294,RC00323,RC00945,RC01188	ko00000,ko00001,ko00002,ko01000	-	-	-	GTP_cyclohydroI
BYD3_k127_8655768_0	925409.KI911562_gene2956	0.0	1249.0	COG1048@1|root,COG1048@2|Bacteria,4NDZT@976|Bacteroidetes,1IW5Z@117747|Sphingobacteriia	976|Bacteroidetes	C	Aconitase C-terminal domain	acnA	-	4.2.1.3	ko:K01681	ko00020,ko00630,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01210,ko01230,map00020,map00630,map00720,map01100,map01110,map01120,map01130,map01200,map01210,map01230	M00009,M00010,M00012,M00173,M00740	R01324,R01325,R01900	RC00497,RC00498,RC00618	br01601,ko00000,ko00001,ko00002,ko01000	-	-	-	Aconitase,Aconitase_C
BYD3_k127_8655768_20	929703.KE386491_gene3305	5.044e-118	394.0	COG1524@1|root,COG1524@2|Bacteria,4NFFG@976|Bacteroidetes,47MMJ@768503|Cytophagia	976|Bacteroidetes	S	PFAM type I phosphodiesterase nucleotide pyrophosphatase	-	-	3.1.3.1	ko:K01113	ko00790,ko01100,ko02020,map00790,map01100,map02020	M00126	R04620	RC00017	ko00000,ko00001,ko00002,ko01000	-	-	-	Phosphodiest
BYD3_k127_8655768_21	1237149.C900_03549	9.823e-116	379.0	COG0725@1|root,COG2273@1|root,COG0725@2|Bacteria,COG2273@2|Bacteria,4NHP5@976|Bacteroidetes,47NAB@768503|Cytophagia	976|Bacteroidetes	G	Glycosyl hydrolases family 16	-	-	-	-	-	-	-	-	-	-	-	-	Glyco_hydro_16
BYD3_k127_8655768_31	313606.M23134_01696	2.288e-43	166.0	COG2230@1|root,COG2230@2|Bacteria,4NX5N@976|Bacteroidetes	976|Bacteroidetes	M	Methyltransferase domain	-	-	-	-	-	-	-	-	-	-	-	-	Methyltransf_11
BYD3_k127_8655768_13	643867.Ftrac_0048	3.018e-156	515.0	COG0457@1|root,COG0642@1|root,COG0457@2|Bacteria,COG2205@2|Bacteria,4NI29@976|Bacteroidetes,47KZN@768503|Cytophagia	976|Bacteroidetes	T	PFAM Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase	-	-	-	-	-	-	-	-	-	-	-	-	HATPase_c,HisKA,TPR_12,TPR_8
BYD3_k127_8655768_35	468059.AUHA01000005_gene2616	4.683e-21	93.0	COG1722@1|root,COG1722@2|Bacteria,4PA4P@976|Bacteroidetes,1IU2S@117747|Sphingobacteriia	976|Bacteroidetes	L	Exonuclease VII small subunit	-	-	3.1.11.6	ko:K03602	ko03430,map03430	-	-	-	ko00000,ko00001,ko01000,ko03400	-	-	-	Exonuc_VII_S
BYD3_k127_8655768_11	468059.AUHA01000005_gene2617	2.107e-168	541.0	COG1570@1|root,COG1570@2|Bacteria,4NE64@976|Bacteroidetes,1IRPR@117747|Sphingobacteriia	976|Bacteroidetes	L	Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides	xseA	-	3.1.11.6	ko:K03601	ko03430,map03430	-	-	-	ko00000,ko00001,ko01000,ko03400	-	-	-	Exonuc_VII_L,tRNA_anti_2
BYD3_k127_8655768_25	1121481.AUAS01000006_gene832	1.503e-89	308.0	COG3325@1|root,COG3325@2|Bacteria,4NNUM@976|Bacteroidetes,47PUW@768503|Cytophagia	976|Bacteroidetes	G	Glycoside hydrolase family	-	-	3.2.1.14	ko:K01183	ko00520,ko01100,map00520,map01100	-	R01206,R02334	RC00467	ko00000,ko00001,ko01000	-	GH18	-	Glyco_hydro_18
BYD3_k127_8655768_16	504472.Slin_2036	4.965e-149	482.0	COG4299@1|root,COG4299@2|Bacteria,4NIQV@976|Bacteroidetes,47K6H@768503|Cytophagia	976|Bacteroidetes	S	Domain of unknown function (DUF5009)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1624,DUF5009
BYD3_k127_8655768_10	1121481.AUAS01000004_gene1593	1.839e-172	550.0	COG3964@1|root,COG3964@2|Bacteria,4NI4W@976|Bacteroidetes,47MS7@768503|Cytophagia	976|Bacteroidetes	S	PFAM amidohydrolase	-	-	3.5.2.3	ko:K01465	ko00240,ko01100,map00240,map01100	M00051	R01993	RC00632	ko00000,ko00001,ko00002,ko01000	-	-	-	Amidohydro_1
BYD3_k127_8655768_26	471854.Dfer_2445	2.796e-75	255.0	COG0251@1|root,COG0251@2|Bacteria,4NNXK@976|Bacteroidetes,47Q05@768503|Cytophagia	976|Bacteroidetes	J	Endoribonuclease L-PSP	-	-	-	-	-	-	-	-	-	-	-	-	Ribonuc_L-PSP
BYD3_k127_8655768_2	616991.JPOO01000003_gene2355	3.679e-273	850.0	COG2010@1|root,COG2133@1|root,COG2010@2|Bacteria,COG2133@2|Bacteria,4NDV1@976|Bacteroidetes,1HYQE@117743|Flavobacteriia,23GHM@178469|Arenibacter	976|Bacteroidetes	G	Glucose / Sorbosone dehydrogenase	-	-	-	-	-	-	-	-	-	-	-	-	Cytochrome_CBB3,GSDH
BYD3_k127_8655768_24	504472.Slin_3963	4.257e-92	308.0	COG2159@1|root,COG2159@2|Bacteria,4NH6P@976|Bacteroidetes,47M0D@768503|Cytophagia	976|Bacteroidetes	S	Carbohydrate family 9 binding domain-like	-	-	-	-	-	-	-	-	-	-	-	-	CBM9_1
BYD3_k127_8655768_7	504472.Slin_3968	7.181e-208	652.0	COG1921@1|root,COG1921@2|Bacteria,4PN21@976|Bacteroidetes,47Y5Q@768503|Cytophagia	976|Bacteroidetes	E	Cys/Met metabolism PLP-dependent enzyme	-	-	2.9.1.1	ko:K01042	ko00450,ko00970,map00450,map00970	-	R08219	RC01246	ko00000,ko00001,ko01000	-	-	-	Aminotran_5,Cys_Met_Meta_PP
BYD3_k127_8655768_8	926549.KI421517_gene4120	8.581e-198	621.0	COG4124@1|root,COG4124@2|Bacteria,4NEZG@976|Bacteroidetes,47MNT@768503|Cytophagia	976|Bacteroidetes	G	Glycosyl hydrolase family 26	-	-	3.2.1.78	ko:K01218	ko00051,ko02024,map00051,map02024	-	R01332	RC00467	ko00000,ko00001,ko01000	-	GH26	-	Glyco_hydro_26
BYD3_k127_8655768_5	509635.N824_04045	1.489e-227	707.0	COG4948@1|root,COG4948@2|Bacteria,4NEPP@976|Bacteroidetes,1IQ2U@117747|Sphingobacteriia	976|Bacteroidetes	M	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain	-	-	4.2.1.6	ko:K01684	ko00052,ko01100,ko01120,map00052,map01100,map01120	M00552	R03033	RC00543	ko00000,ko00001,ko00002,ko01000	-	-	-	MR_MLE_C,MR_MLE_N
BYD3_k127_8655768_4	760192.Halhy_3918	6.246e-236	754.0	COG0577@1|root,COG0577@2|Bacteria,4NDUK@976|Bacteroidetes,1IW4Z@117747|Sphingobacteriia	976|Bacteroidetes	V	MacB-like periplasmic core domain	-	-	-	ko:K02004	-	M00258	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	FtsX,MacB_PCD
BYD3_k127_8655768_34	1279009.ADICEAN_03486	3.975e-26	123.0	COG0457@1|root,COG3850@1|root,COG0457@2|Bacteria,COG3850@2|Bacteria	2|Bacteria	T	phosphorelay sensor kinase activity	-	-	2.7.11.1	ko:K03406,ko:K12132	ko02020,ko02030,map02020,map02030	-	-	-	ko00000,ko00001,ko01000,ko01001,ko02035	-	-	-	EAL,GAF,GAF_2,GGDEF,HAMP,HD,LapD_MoxY_N,PAS_9
BYD3_k127_8655768_12	1237149.C900_01372	6.226e-157	499.0	COG0685@1|root,COG0685@2|Bacteria,4NDY0@976|Bacteroidetes,47KQ7@768503|Cytophagia	976|Bacteroidetes	E	Methylenetetrahydrofolate reductase	metF	-	1.5.1.20	ko:K00297	ko00670,ko00720,ko01100,ko01120,ko01200,ko01523,map00670,map00720,map01100,map01120,map01200,map01523	M00377	R01224,R07168	RC00081	ko00000,ko00001,ko00002,ko01000	-	-	-	MTHFR
BYD3_k127_8704121_1	926549.KI421517_gene575	2e-14	76.0	COG0154@1|root,COG0154@2|Bacteria,4NF8C@976|Bacteroidetes,47MMB@768503|Cytophagia	976|Bacteroidetes	J	Amidase	gatA	-	3.5.1.4	ko:K01426	ko00330,ko00360,ko00380,ko00627,ko00643,ko01120,map00330,map00360,map00380,map00627,map00643,map01120	-	R02540,R03096,R03180,R03909,R05551,R05590	RC00010,RC00100,RC00950,RC01025	ko00000,ko00001,ko01000	-	-	-	Amidase
BYD3_k127_8704121_2	1218108.KB908311_gene178	8.532e-11	63.0	COG3209@1|root,COG3209@2|Bacteria,4NXTN@976|Bacteroidetes	976|Bacteroidetes	M	Participates in initiation and elongation during chromosome replication	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_8704121_0	643867.Ftrac_0540	2.573e-188	649.0	COG3209@1|root,COG3209@2|Bacteria,4PME7@976|Bacteroidetes,47Y2P@768503|Cytophagia	976|Bacteroidetes	M	COG3209 Rhs family protein	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_8724219_4	1120966.AUBU01000014_gene618	1.843e-219	696.0	COG1132@1|root,COG1132@2|Bacteria,4NE2D@976|Bacteroidetes,47JQI@768503|Cytophagia	976|Bacteroidetes	V	ABC transporter transmembrane region	msbA	-	-	ko:K06147,ko:K11085	ko02010,map02010	-	-	-	ko00000,ko00001,ko01000,ko02000	3.A.1.106,3.A.1.109,3.A.1.21	-	-	ABC_membrane,ABC_tran
BYD3_k127_8724219_3	1237149.C900_03963	1.013e-222	704.0	2DBCF@1|root,2Z8DB@2|Bacteria,4NG6B@976|Bacteroidetes,47JNN@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	Caps_assemb_Wzi
BYD3_k127_8724219_32	1237149.C900_03962	4.06e-35	137.0	COG0254@1|root,COG0254@2|Bacteria,4NS7P@976|Bacteroidetes,47R60@768503|Cytophagia	976|Bacteroidetes	J	Ribosomal protein L31	rpmE2	-	-	ko:K02909	ko03010,map03010	M00178	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_L31
BYD3_k127_8724219_12	1237149.C900_03961	9.794e-140	458.0	COG1208@1|root,COG1208@2|Bacteria,4PM6W@976|Bacteroidetes,47MB6@768503|Cytophagia	976|Bacteroidetes	JM	Sugar nucleotidyl transferase	-	-	-	-	-	-	-	-	-	-	-	-	Hexapep,NTP_transf_4
BYD3_k127_8724219_14	1237149.C900_03960	2.656e-123	406.0	COG0470@1|root,COG0470@2|Bacteria,4NEYF@976|Bacteroidetes,47XWD@768503|Cytophagia	976|Bacteroidetes	L	DNA polymerase III, delta' subunit	holB	-	2.7.7.7	ko:K02341	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	M00260	R00375,R00376,R00377,R00378	RC02795	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	-	-	-	DNA_pol3_delta2
BYD3_k127_8724219_18	1237149.C900_03959	1.734e-106	353.0	COG0181@1|root,COG0181@2|Bacteria,4NHH4@976|Bacteroidetes,47M9Y@768503|Cytophagia	976|Bacteroidetes	H	Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps	hemC	-	2.5.1.61	ko:K01749	ko00860,ko01100,ko01110,ko01120,map00860,map01100,map01110,map01120	M00121	R00084	RC02317	ko00000,ko00001,ko00002,ko01000	-	-	-	HEM4,Porphobil_deam,Porphobil_deamC
BYD3_k127_8724219_21	1237149.C900_03958	6.185e-91	307.0	COG0652@1|root,COG0652@2|Bacteria,4NGT6@976|Bacteroidetes,47MY6@768503|Cytophagia	976|Bacteroidetes	O	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides	-	-	5.2.1.8	ko:K03768	-	-	-	-	ko00000,ko01000,ko03110	-	-	-	Pro_isomerase
BYD3_k127_8724219_15	1237149.C900_03957	6.621e-121	394.0	COG1091@1|root,COG1091@2|Bacteria,4NE3K@976|Bacteroidetes,47MQV@768503|Cytophagia	976|Bacteroidetes	M	Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose	rfbD	-	1.1.1.133	ko:K00067	ko00521,ko00523,ko01130,map00521,map00523,map01130	M00793	R02777	RC00182	ko00000,ko00001,ko00002,ko01000	-	-	-	RmlD_sub_bind
BYD3_k127_8724219_7	925409.KI911562_gene2815	2.411e-210	662.0	COG0531@1|root,COG0531@2|Bacteria,4NH7J@976|Bacteroidetes,1IPW4@117747|Sphingobacteriia	976|Bacteroidetes	E	amino acid	-	-	-	ko:K03294	-	-	-	-	ko00000	2.A.3.2	-	-	AA_permease_2
BYD3_k127_8724219_17	269798.CHU_2081	3.079e-110	367.0	COG3437@1|root,COG4251@1|root,COG3437@2|Bacteria,COG4251@2|Bacteria,4NI5R@976|Bacteroidetes,47V13@768503|Cytophagia	976|Bacteroidetes	T	His Kinase A (phosphoacceptor) domain	-	-	-	-	-	-	-	-	-	-	-	-	HATPase_c,Response_reg
BYD3_k127_8724219_29	1237149.C900_01499	3.061e-52	187.0	COG0784@1|root,COG0784@2|Bacteria,4PNN1@976|Bacteroidetes,47YBH@768503|Cytophagia	976|Bacteroidetes	T	cheY-homologous receiver domain	-	-	-	-	-	-	-	-	-	-	-	-	Response_reg
BYD3_k127_8724219_36	497964.CfE428DRAFT_4907	0.0002677	46.0	COG4251@1|root,COG4251@2|Bacteria,46UYC@74201|Verrucomicrobia	2|Bacteria	T	histidine kinase A domain protein	-	-	-	-	-	-	-	-	-	-	-	-	CHASE3,HATPase_c,HisKA,PAS,PAS_4,PAS_9,Response_reg
BYD3_k127_8724219_9	1237149.C900_03939	1.411e-174	563.0	COG1524@1|root,COG1524@2|Bacteria,4NE94@976|Bacteroidetes,47JP2@768503|Cytophagia	976|Bacteroidetes	P	type I phosphodiesterase nucleotide pyrophosphatase	pafA	-	-	-	-	-	-	-	-	-	-	-	Phosphodiest
BYD3_k127_8724219_13	1237149.C900_03938	9.844e-134	458.0	COG1729@1|root,COG1729@2|Bacteria,4PP99@976|Bacteroidetes,47VYS@768503|Cytophagia	976|Bacteroidetes	S	Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division	-	-	-	-	-	-	-	-	-	-	-	-	WG_beta_rep
BYD3_k127_8724219_6	1237149.C900_02383	5.97e-215	676.0	28KRY@1|root,2ZA9E@2|Bacteria,4NI1H@976|Bacteroidetes,47N4R@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_8724219_28	1237149.C900_02382	1.25e-59	208.0	COG0784@1|root,COG0784@2|Bacteria,4NRC9@976|Bacteroidetes,47QC7@768503|Cytophagia	976|Bacteroidetes	T	cheY-homologous receiver domain	-	-	-	-	-	-	-	-	-	-	-	-	Response_reg
BYD3_k127_8724219_1	1237149.C900_02381	1.523e-250	781.0	COG1012@1|root,COG1012@2|Bacteria,4NFPJ@976|Bacteroidetes,47JJR@768503|Cytophagia	976|Bacteroidetes	C	Belongs to the aldehyde dehydrogenase family	pcd	-	1.2.1.3	ko:K00128	ko00010,ko00053,ko00071,ko00280,ko00310,ko00330,ko00340,ko00380,ko00410,ko00561,ko00620,ko00625,ko00903,ko00981,ko01100,ko01110,ko01120,ko01130,map00010,map00053,map00071,map00280,map00310,map00330,map00340,map00380,map00410,map00561,map00620,map00625,map00903,map00981,map01100,map01110,map01120,map01130	M00135	R00264,R00631,R00710,R00904,R01752,R01986,R02549,R02678,R02940,R02957,R03283,R03869,R04065,R04506,R04903,R05050,R05237,R05238,R05286,R06366,R08146	RC00047,RC00071,RC00080,RC00186,RC00218,RC00242,RC00816,RC01500	ko00000,ko00001,ko00002,ko01000	-	-	-	Aldedh
BYD3_k127_8724219_10	1237149.C900_02380	1.408e-167	540.0	COG0265@1|root,COG0265@2|Bacteria,4NFCS@976|Bacteroidetes,47KF5@768503|Cytophagia	976|Bacteroidetes	O	PDZ domain (Also known as DHR or GLGF)	htrA	-	-	-	-	-	-	-	-	-	-	-	PDZ_1,PDZ_2,Trypsin_2
BYD3_k127_8724219_31	388413.ALPR1_18103	1.846e-38	148.0	COG0071@1|root,COG0071@2|Bacteria,4NSJB@976|Bacteroidetes,47R4W@768503|Cytophagia	976|Bacteroidetes	O	Belongs to the small heat shock protein (HSP20) family	-	-	-	ko:K13993	ko04141,map04141	-	-	-	ko00000,ko00001,ko03110	-	-	-	HSP20
BYD3_k127_8724219_22	1227739.Hsw_2783	1.39e-87	326.0	COG5295@1|root,COG5295@2|Bacteria,4PPTV@976|Bacteroidetes,47XCH@768503|Cytophagia	976|Bacteroidetes	UW	Hep Hag repeat protein	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_8724219_8	1123248.KB893328_gene890	7.403e-196	652.0	COG2133@1|root,COG2133@2|Bacteria,4NIJA@976|Bacteroidetes	976|Bacteroidetes	G	Glucose / Sorbosone dehydrogenase	-	-	-	-	-	-	-	-	-	-	-	-	CBM9_1,GSDH,I-set,Ig_3
BYD3_k127_8724219_25	762903.Pedsa_0399	3.799e-67	234.0	COG3127@1|root,COG3127@2|Bacteria,4NN8S@976|Bacteroidetes,1IRV7@117747|Sphingobacteriia	976|Bacteroidetes	Q	membrane	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_8724219_33	714943.Mucpa_1260	7.993e-35	136.0	COG0640@1|root,COG0640@2|Bacteria,4NSAV@976|Bacteroidetes,1IT7Z@117747|Sphingobacteriia	976|Bacteroidetes	K	transcriptional regulator	-	-	-	-	-	-	-	-	-	-	-	-	HTH_34
BYD3_k127_8724219_2	1121895.Q765_01970	2.451e-247	769.0	COG1032@1|root,COG1032@2|Bacteria,4NFPW@976|Bacteroidetes,1INE4@117743|Flavobacteriia,2NZ97@237|Flavobacterium	976|Bacteroidetes	C	Elongator protein 3, MiaB family, Radical SAM	-	-	-	-	-	-	-	-	-	-	-	-	B12-binding,DUF4070,Radical_SAM
BYD3_k127_8724219_16	714943.Mucpa_1261	5.661e-115	386.0	COG4452@1|root,COG4452@2|Bacteria,4NGKY@976|Bacteroidetes,1IPKH@117747|Sphingobacteriia	976|Bacteroidetes	V	Inner membrane protein CreD	creD	-	-	ko:K06143	-	-	-	-	ko00000	-	-	-	CreD
BYD3_k127_8724219_0	1237149.C900_05420	4.589e-284	880.0	COG1012@1|root,COG1012@2|Bacteria,4NFTW@976|Bacteroidetes,47JZ2@768503|Cytophagia	976|Bacteroidetes	C	TIGRFAM delta-1-pyrroline-5-carboxylate dehydrogenase, group 1	pruA	-	1.2.1.88,1.5.5.2	ko:K00294,ko:K13821	ko00250,ko00330,ko01100,ko01110,ko01130,map00250,map00330,map01100,map01110,map01130	-	R00245,R00707,R00708,R01253,R04444,R04445,R05051	RC00080,RC00083,RC00216,RC00242,RC00255	ko00000,ko00001,ko01000,ko03000	-	-	-	Aldedh,Pro_dh
BYD3_k127_8724219_27	1237149.C900_05421	1.066e-63	228.0	COG1011@1|root,COG1011@2|Bacteria,4NM66@976|Bacteroidetes,47Q1Q@768503|Cytophagia	976|Bacteroidetes	S	haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E	yjjG	-	-	ko:K07025	-	-	-	-	ko00000	-	-	-	HAD_2
BYD3_k127_8724219_30	1237149.C900_05422	1.231e-48	177.0	COG0640@1|root,COG0640@2|Bacteria,4NRN0@976|Bacteroidetes,47QVI@768503|Cytophagia	976|Bacteroidetes	K	arsR family	arsR	-	-	ko:K03892	-	-	-	-	ko00000,ko03000	-	-	-	HTH_20,HTH_5
BYD3_k127_8724219_26	1237149.C900_05423	1.043e-63	225.0	2BBSK@1|root,325AS@2|Bacteria,4NR2Q@976|Bacteroidetes,47JP3@768503|Cytophagia	976|Bacteroidetes	S	CarboxypepD_reg-like domain	-	-	-	-	-	-	-	-	-	-	-	-	CarbopepD_reg_2
BYD3_k127_8724219_35	1392490.JHZX01000001_gene1039	2.179e-21	95.0	COG2827@1|root,COG2827@2|Bacteria	2|Bacteria	L	Endonuclease containing a URI domain	-	-	3.1.21.3	ko:K01154,ko:K07461	-	-	-	-	ko00000,ko01000,ko02048	-	-	-	GIY-YIG
BYD3_k127_8724219_20	485918.Cpin_2807	1.277e-91	310.0	COG0265@1|root,COG0265@2|Bacteria,4NGRE@976|Bacteroidetes	976|Bacteroidetes	O	smart pdz dhr glgf	-	-	-	-	-	-	-	-	-	-	-	-	PDZ_2,Trypsin_2
BYD3_k127_8724219_5	714943.Mucpa_4144	3.413e-218	690.0	COG0513@1|root,COG0513@2|Bacteria,4NEJV@976|Bacteroidetes,1IQEP@117747|Sphingobacteriia	976|Bacteroidetes	L	Belongs to the DEAD box helicase family	deaD	-	3.6.4.13	ko:K05592	ko03018,map03018	-	-	-	ko00000,ko00001,ko01000,ko03009,ko03019	-	-	-	DEAD,DbpA,Helicase_C
BYD3_k127_8724219_24	1046627.BZARG_1530	4.123e-78	289.0	COG2202@1|root,COG4251@1|root,COG5002@1|root,COG2202@2|Bacteria,COG4251@2|Bacteria,COG5002@2|Bacteria,4NFC3@976|Bacteroidetes,1HWUK@117743|Flavobacteriia	976|Bacteroidetes	T	Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase	-	-	-	-	-	-	-	-	-	-	-	-	HATPase_c,PAS,PAS_3,PAS_4,PAS_9
BYD3_k127_8724219_23	929556.Solca_4267	1.103e-85	291.0	COG0566@1|root,COG0566@2|Bacteria,4NEFJ@976|Bacteroidetes,1IXJ7@117747|Sphingobacteriia	976|Bacteroidetes	J	PFAM SpoU rRNA Methylase family	spoU	-	-	ko:K03437	-	-	-	-	ko00000,ko03016	-	-	-	SpoU_methylase,SpoU_sub_bind
BYD3_k127_8724219_11	1296415.JACC01000030_gene2778	1.783e-161	531.0	COG0457@1|root,COG2972@1|root,COG0457@2|Bacteria,COG2972@2|Bacteria,4NF45@976|Bacteroidetes,1HXAW@117743|Flavobacteriia,2YGNW@290174|Aquimarina	976|Bacteroidetes	T	Tetratricopeptide repeat	-	-	-	-	-	-	-	-	-	-	-	-	His_kinase,TPR_10,TPR_12,TPR_7,TPR_8
BYD3_k127_8724219_19	1296415.JACC01000030_gene2779	1.822e-92	309.0	COG3279@1|root,COG3279@2|Bacteria,4NFPV@976|Bacteroidetes,1I0QN@117743|Flavobacteriia,2YJJY@290174|Aquimarina	976|Bacteroidetes	T	LytTr DNA-binding domain	-	-	-	ko:K02477	-	-	-	-	ko00000,ko02022	-	-	-	LytTR,Response_reg
BYD3_k127_8779696_2	509635.N824_15670	1.503e-25	112.0	COG3828@1|root,COG3828@2|Bacteria,4NEWH@976|Bacteroidetes,1IR1M@117747|Sphingobacteriia	976|Bacteroidetes	S	Methane oxygenase PmoA	-	-	-	-	-	-	-	-	-	-	-	-	PmoA
BYD3_k127_8779696_0	1237149.C900_05293	8.161e-229	734.0	COG0577@1|root,COG0577@2|Bacteria,4NKYD@976|Bacteroidetes,47MU6@768503|Cytophagia	976|Bacteroidetes	V	MacB-like periplasmic core domain	-	-	-	-	-	-	-	-	-	-	-	-	FtsX,MacB_PCD
BYD3_k127_8779696_1	861299.J421_0563	8.722e-124	407.0	COG1472@1|root,COG1472@2|Bacteria	2|Bacteria	G	Belongs to the glycosyl hydrolase 3 family	-	-	3.2.1.21	ko:K05349	ko00460,ko00500,ko00940,ko01100,ko01110,map00460,map00500,map00940,map01100,map01110	-	R00026,R02558,R02887,R02985,R03527,R04949,R04998,R10035,R10039,R10040	RC00049,RC00059,RC00171,RC00262,RC00397,RC00451,RC00714,RC00746,RC01248	ko00000,ko00001,ko01000	-	GH3	-	Fn3-like,Glyco_hydro_3,Glyco_hydro_3_C,PA14
BYD3_k127_8800702_4	485918.Cpin_1921	8.09e-174	555.0	COG0028@1|root,COG0028@2|Bacteria,4NENG@976|Bacteroidetes,1IPTP@117747|Sphingobacteriia	976|Bacteroidetes	EH	Acetolactate synthase, large subunit	ilvB	-	2.2.1.6	ko:K01652	ko00290,ko00650,ko00660,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00290,map00650,map00660,map00770,map01100,map01110,map01130,map01210,map01230	M00019,M00570	R00006,R00014,R00226,R03050,R04672,R04673,R08648	RC00027,RC00106,RC01192,RC02744,RC02893	ko00000,ko00001,ko00002,ko01000	-	-	-	TPP_enzyme_C,TPP_enzyme_M,TPP_enzyme_N
BYD3_k127_8800702_0	1338011.BD94_3411	4.384e-284	880.0	COG0129@1|root,COG0129@2|Bacteria,4NFHP@976|Bacteroidetes,1HX1X@117743|Flavobacteriia,34PMN@308865|Elizabethkingia	976|Bacteroidetes	E	Catalyzes the dehydration of 2,3-dihydroxy-3-methylbutanoate to 3-methyl-2-oxobutanoate in valine and isoleucine biosynthesis	ilvD	-	4.2.1.9	ko:K01687	ko00290,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00290,map00770,map01100,map01110,map01130,map01210,map01230	M00019,M00570	R01209,R04441,R05070	RC00468,RC01714	ko00000,ko00001,ko00002,ko01000	-	-	-	ILVD_EDD
BYD3_k127_8800702_6	1341181.FLJC2902T_24660	1.211e-120	394.0	COG0115@1|root,COG0115@2|Bacteria,4NI83@976|Bacteroidetes,1HZ20@117743|Flavobacteriia,2NUWC@237|Flavobacterium	976|Bacteroidetes	E	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family	ilvE	-	2.6.1.42	ko:K00826	ko00270,ko00280,ko00290,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00270,map00280,map00290,map00770,map01100,map01110,map01130,map01210,map01230	M00019,M00036,M00119,M00570	R01090,R01214,R02199,R10991	RC00006,RC00036	ko00000,ko00001,ko00002,ko01000,ko01007	-	-	-	Aminotran_4
BYD3_k127_8800702_1	153721.MYP_2264	1.439e-219	687.0	COG0436@1|root,COG0436@2|Bacteria,4NFUY@976|Bacteroidetes,47MC8@768503|Cytophagia	976|Bacteroidetes	E	Aminotransferase class I and II	-	-	-	-	-	-	-	-	-	-	-	-	Aminotran_1_2
BYD3_k127_8800702_5	1453498.LG45_09625	3.816e-138	446.0	COG3781@1|root,COG3781@2|Bacteria,4NGJ0@976|Bacteroidetes,1HYG9@117743|Flavobacteriia,2NVTB@237|Flavobacterium	976|Bacteroidetes	S	Bestrophin, RFP-TM, chloride channel	-	-	-	ko:K08994	-	-	-	-	ko00000,ko02000	1.A.46.2	-	-	Bestrophin
BYD3_k127_8800702_7	1270196.JCKI01000010_gene766	4.169e-34	136.0	COG2207@1|root,COG2207@2|Bacteria,4NPNI@976|Bacteroidetes,1J16A@117747|Sphingobacteriia	976|Bacteroidetes	K	helix_turn_helix, arabinose operon control protein	-	-	-	-	-	-	-	-	-	-	-	-	HTH_18
BYD3_k127_8800702_3	1237149.C900_05889	4.534e-177	566.0	COG2265@1|root,COG2265@2|Bacteria,4NFP1@976|Bacteroidetes,47KB6@768503|Cytophagia	976|Bacteroidetes	J	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family	rumA	-	2.1.1.190	ko:K03215	-	-	-	-	ko00000,ko01000,ko03009	-	-	-	TRAM,tRNA_U5-meth_tr
BYD3_k127_8800702_2	1237149.C900_05890	1.83e-212	691.0	COG3291@1|root,COG3291@2|Bacteria,4NDU9@976|Bacteroidetes,47MS8@768503|Cytophagia	976|Bacteroidetes	M	C-terminal domain of CHU protein family	-	-	-	-	-	-	-	-	-	-	-	-	CHU_C,PKD
BYD3_k127_8803861_8	1121897.AUGO01000006_gene750	1.082e-08	59.0	COG4977@1|root,COG4977@2|Bacteria,4PMWI@976|Bacteroidetes,1IJZW@117743|Flavobacteriia,2P0UG@237|Flavobacterium	976|Bacteroidetes	K	helix_turn_helix, arabinose operon control protein	-	-	-	-	-	-	-	-	-	-	-	-	HTH_18
BYD3_k127_8803861_1	1279009.ADICEAN_01593	1.611e-283	879.0	COG0008@1|root,COG0008@2|Bacteria,4NFCC@976|Bacteroidetes,47MT0@768503|Cytophagia	976|Bacteroidetes	J	PFAM Glutamyl glutaminyl-tRNA synthetase, class Ic, catalytic domain	glnS	-	6.1.1.18	ko:K01886	ko00970,ko01100,map00970,map01100	M00359,M00360	R03652	RC00055,RC00523	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	-	-	-	tRNA-synt_1c,tRNA-synt_1c_C
BYD3_k127_8803861_5	760192.Halhy_0540	3.569e-36	138.0	COG2207@1|root,COG2207@2|Bacteria,4NEHD@976|Bacteroidetes,1IPPP@117747|Sphingobacteriia	976|Bacteroidetes	K	transcriptional regulator	-	-	-	-	-	-	-	-	-	-	-	-	HTH_18
BYD3_k127_8803861_7	1121904.ARBP01000030_gene1944	1.433e-23	102.0	COG0110@1|root,COG0110@2|Bacteria,4NH27@976|Bacteroidetes,47PKD@768503|Cytophagia	976|Bacteroidetes	S	Hexapeptide repeat of succinyl-transferase	-	-	-	-	-	-	-	-	-	-	-	-	Hexapep,Hexapep_2
BYD3_k127_8803861_9	1358423.N180_08675	1.373e-07	56.0	COG0110@1|root,COG0110@2|Bacteria,4NH27@976|Bacteroidetes,1IWYX@117747|Sphingobacteriia	976|Bacteroidetes	S	Hexapeptide repeat of succinyl-transferase	-	-	-	-	-	-	-	-	-	-	-	-	Hexapep,Hexapep_2
BYD3_k127_8803861_6	468059.AUHA01000003_gene1679	1.771e-27	113.0	COG0110@1|root,COG0110@2|Bacteria,4NH27@976|Bacteroidetes	976|Bacteroidetes	S	Bacterial transferase hexapeptide repeat protein	-	-	-	-	-	-	-	-	-	-	-	-	Hexapep,Hexapep_2
BYD3_k127_8803861_3	1191523.MROS_0118	2.444e-238	786.0	COG0745@1|root,COG3292@1|root,COG5002@1|root,COG0745@2|Bacteria,COG3292@2|Bacteria,COG5002@2|Bacteria	2|Bacteria	T	protein histidine kinase activity	-	-	-	ko:K16923	-	M00582	-	-	ko00000,ko00002,ko02000	3.A.1.28	-	-	HATPase_c,HTH_18,HisKA,PAS_4,Reg_prop,Response_reg,Y_Y_Y
BYD3_k127_8803861_2	1121957.ATVL01000008_gene4456	1.856e-275	856.0	COG3507@1|root,COG3507@2|Bacteria,4NGA5@976|Bacteroidetes,47K5U@768503|Cytophagia	976|Bacteroidetes	G	Belongs to the glycosyl hydrolase 43 family	-	-	3.2.1.37,3.2.1.55	ko:K01198,ko:K01209	ko00520,ko01100,map00520,map01100	-	R01433,R01762	RC00467	ko00000,ko00001,ko01000	-	GH43,GH51	-	Glyco_hydro_43
BYD3_k127_8803861_0	504472.Slin_5655	1.211e-317	1004.0	COG1629@1|root,COG4771@2|Bacteria,4P1Z5@976|Bacteroidetes,47Y6I@768503|Cytophagia	976|Bacteroidetes	P	TonB dependent receptor	-	-	-	-	-	-	-	-	-	-	-	-	CarbopepD_reg_2,Plug,TonB_dep_Rec
BYD3_k127_8803861_4	760192.Halhy_4822	7.589e-109	364.0	COG0702@1|root,COG0702@2|Bacteria,4PKHQ@976|Bacteroidetes,1IQ8Z@117747|Sphingobacteriia	976|Bacteroidetes	GM	PFAM RagB SusD	-	-	-	ko:K21572	-	-	-	-	ko00000,ko02000	8.A.46.1,8.A.46.3	-	-	SusD-like_3,SusD_RagB
BYD3_k127_8925491_1	613026.HRAG_00328	2.636e-39	161.0	COG2849@1|root,COG2849@2|Bacteria,1MZCG@1224|Proteobacteria,42XCP@68525|delta/epsilon subdivisions,2YQ7V@29547|Epsilonproteobacteria	29547|Epsilonproteobacteria	S	MORN repeat variant	-	-	-	-	-	-	-	-	-	-	-	-	MORN_2
BYD3_k127_8925491_4	153721.MYP_2753	5.887e-11	65.0	COG2197@1|root,COG2197@2|Bacteria,4NNE9@976|Bacteroidetes,47QWZ@768503|Cytophagia	976|Bacteroidetes	T	helix_turn_helix, Lux Regulon	-	-	-	-	-	-	-	-	-	-	-	-	GerE,HATPase_c,Response_reg
BYD3_k127_8925491_3	1358423.N180_20935	1.045e-12	72.0	COG2197@1|root,COG2197@2|Bacteria,4NNE9@976|Bacteroidetes,1IXFV@117747|Sphingobacteriia	976|Bacteroidetes	KT	Pfam Bacterial regulatory proteins, luxR family	-	-	-	-	-	-	-	-	-	-	-	-	GerE,HATPase_c,Response_reg
BYD3_k127_8925491_2	1121898.Q766_03410	4.359e-21	94.0	COG3250@1|root,COG3250@2|Bacteria,4NEWN@976|Bacteroidetes,1HXYF@117743|Flavobacteriia,2NT5D@237|Flavobacterium	976|Bacteroidetes	G	Belongs to the glycosyl hydrolase 2 family	-	-	3.2.1.23	ko:K01190	ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100	-	R01105,R01678,R03355,R04783,R06114	RC00049,RC00452	ko00000,ko00001,ko01000	-	-	-	DUF4982,Glyco_hydro_2,Glyco_hydro_2_C,Glyco_hydro_2_N
BYD3_k127_8925491_0	1089547.KB913013_gene3361	1.149e-228	718.0	COG3386@1|root,COG3386@2|Bacteria,4NH7B@976|Bacteroidetes,47KJ7@768503|Cytophagia	976|Bacteroidetes	G	BNR repeat-containing family member	-	-	-	-	-	-	-	-	-	-	-	-	BNR_4
BYD3_k127_8942586_6	694427.Palpr_2800	1.555e-30	127.0	COG3209@1|root,COG3209@2|Bacteria,4P8KM@976|Bacteroidetes,2FZER@200643|Bacteroidia	976|Bacteroidetes	M	COG3209 Rhs family protein	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_8942586_3	929562.Emtol_1394	1.881e-39	154.0	COG1943@1|root,COG1943@2|Bacteria,4NQR4@976|Bacteroidetes,47QSX@768503|Cytophagia	976|Bacteroidetes	L	Transposase IS200 like	-	-	-	-	-	-	-	-	-	-	-	-	Y1_Tnp
BYD3_k127_8942586_1	1123277.KB893195_gene5653	7.793e-199	629.0	COG1904@1|root,COG1904@2|Bacteria,4NFHS@976|Bacteroidetes,47KAP@768503|Cytophagia	976|Bacteroidetes	G	Glucuronate isomerase	uxaC	-	5.3.1.12	ko:K01812	ko00040,ko01100,map00040,map01100	M00061,M00631	R01482,R01983	RC00376	ko00000,ko00001,ko00002,ko01000	-	-	-	UxaC
BYD3_k127_8942586_0	509635.N824_23560	1.007e-229	718.0	COG0673@1|root,COG0673@2|Bacteria,4NHDS@976|Bacteroidetes,1IVBU@117747|Sphingobacteriia	976|Bacteroidetes	S	Oxidoreductase family, NAD-binding Rossmann fold	-	-	-	-	-	-	-	-	-	-	-	-	GFO_IDH_MocA,GFO_IDH_MocA_C
BYD3_k127_8942586_2	925409.KI911562_gene1384	9.835e-198	625.0	COG1082@1|root,COG2152@1|root,COG1082@2|Bacteria,COG2152@2|Bacteria,4NGDZ@976|Bacteroidetes,1IQ4Y@117747|Sphingobacteriia	976|Bacteroidetes	G	Domain of Unknown Function (DUF1080)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1080
BYD3_k127_8942586_5	1449049.JONW01000005_gene1358	4.886e-31	129.0	29DWE@1|root,300UA@2|Bacteria,1RDK5@1224|Proteobacteria,2TY0U@28211|Alphaproteobacteria	28211|Alphaproteobacteria	S	Cytochrome P460	-	-	-	-	-	-	-	-	-	-	-	-	Cytochrome_P460
BYD3_k127_987051_9	925409.KI911562_gene2073	2.811e-55	198.0	COG1502@1|root,COG1502@2|Bacteria,4P1V3@976|Bacteroidetes,1IWXC@117747|Sphingobacteriia	976|Bacteroidetes	L	ORF6N domain	-	-	-	-	-	-	-	-	-	-	-	-	ORF6N
BYD3_k127_987051_5	1123248.KB893325_gene1152	1.559e-188	598.0	COG1820@1|root,COG1820@2|Bacteria,4NJ35@976|Bacteroidetes,1IPWP@117747|Sphingobacteriia	976|Bacteroidetes	G	Belongs to the metallo-dependent hydrolases superfamily. NagA family	-	-	3.5.1.25	ko:K01443	ko00520,ko01130,map00520,map01130	-	R02059	RC00166,RC00300	ko00000,ko00001,ko01000	-	-	-	Amidohydro_1
BYD3_k127_987051_2	1123248.KB893325_gene1151	4.436e-224	700.0	COG0738@1|root,COG0738@2|Bacteria,4NEYR@976|Bacteroidetes,1IR81@117747|Sphingobacteriia	976|Bacteroidetes	G	glucose galactose transporter	-	-	-	-	-	-	-	-	-	-	-	-	MFS_1
BYD3_k127_987051_8	1123248.KB893325_gene1150	2.804e-101	335.0	COG0363@1|root,COG0363@2|Bacteria,4NFCM@976|Bacteroidetes,1IUZV@117747|Sphingobacteriia	976|Bacteroidetes	G	Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase	-	-	3.5.99.6	ko:K02564	ko00520,ko01100,map00520,map01100	-	R00765	RC00163	ko00000,ko00001,ko01000	-	-	-	Glucosamine_iso
BYD3_k127_987051_4	1120965.AUBV01000007_gene2630	3.789e-196	620.0	COG0673@1|root,COG0673@2|Bacteria,4NF96@976|Bacteroidetes,47THD@768503|Cytophagia	976|Bacteroidetes	S	Oxidoreductase family, NAD-binding Rossmann fold	-	-	-	-	-	-	-	-	-	-	-	-	GFO_IDH_MocA,GFO_IDH_MocA_C
BYD3_k127_987051_6	1239962.C943_01333	4.681e-126	411.0	COG0673@1|root,COG0673@2|Bacteria,4NHFK@976|Bacteroidetes,47MBN@768503|Cytophagia	976|Bacteroidetes	S	Oxidoreductase family, NAD-binding Rossmann fold	-	-	-	-	-	-	-	-	-	-	-	-	GFO_IDH_MocA
BYD3_k127_987051_0	641524.ADICYQ_5828	0.0	1345.0	COG4206@1|root,COG4206@2|Bacteria,4NZWU@976|Bacteroidetes,47JVR@768503|Cytophagia	976|Bacteroidetes	H	TIGRFAM TonB-dependent outer membrane receptor, SusC RagA subfamily, signature region	-	-	-	-	-	-	-	-	-	-	-	-	CarbopepD_reg_2,Plug,TonB_dep_Rec
BYD3_k127_987051_3	471854.Dfer_2720	1.131e-199	632.0	COG4198@1|root,COG4198@2|Bacteria,4NFUK@976|Bacteroidetes,47MHZ@768503|Cytophagia	976|Bacteroidetes	S	Starch-binding associating with outer membrane	-	-	-	-	-	-	-	-	-	-	-	-	SusD-like,SusD-like_2
BYD3_k127_987051_1	1123248.KB893359_gene2156	0.0	1156.0	COG1413@1|root,COG2133@1|root,COG3474@1|root,COG1413@2|Bacteria,COG2133@2|Bacteria,COG3474@2|Bacteria,4NGAU@976|Bacteroidetes,1IWXQ@117747|Sphingobacteriia	976|Bacteroidetes	CG	Membrane-bound dehydrogenase domain	-	-	-	-	-	-	-	-	-	-	-	-	Cytochrom_C
BYD3_k127_987051_7	1123248.KB893359_gene2154	4.087e-121	393.0	COG0726@1|root,COG0726@2|Bacteria,4NJK7@976|Bacteroidetes	976|Bacteroidetes	G	PFAM Polysaccharide deacetylase	-	-	-	-	-	-	-	-	-	-	-	-	Polysacc_deac_1
BYD3_k127_987051_11	641526.ADIWIN_2984	2.21e-19	93.0	2DM9Y@1|root,32AJ6@2|Bacteria,4NQQC@976|Bacteroidetes,1I336@117743|Flavobacteriia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_987051_10	1454007.JAUG01000162_gene4315	9.68e-20	99.0	2C802@1|root,332EH@2|Bacteria,4NR3G@976|Bacteroidetes,1ISY9@117747|Sphingobacteriia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	DUF4440
BYD3_k127_987051_12	743722.Sph21_5079	1.123e-09	61.0	2EUGE@1|root,33MYP@2|Bacteria,4NZG4@976|Bacteroidetes,1IYPX@117747|Sphingobacteriia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_997473_0	1048983.EL17_24045	2.229e-196	662.0	COG3209@1|root,COG3209@2|Bacteria,4NE5D@976|Bacteroidetes,47KAA@768503|Cytophagia	976|Bacteroidetes	M	TIGRFAM RHS repeat-associated core domain	-	-	-	-	-	-	-	-	-	-	-	-	-
## 5368 queries scanned
## Total time (seconds): 19.917177200317383
## Rate: 269.52 q/s