## Fri Dec 12 21:21:36 2025
## emapper-2.1.13
## /data/anaconda3/envs/eggnog-mapper/bin/emapper.py -i /data/result/bins/wyx/qs/new/BYD3_bin.26.fa -m mmseqs --itype genome -o BYD3_bin.26 --output_dir /data/result/bins/wyx/egg/BYD3_bin.26 --cpu 32
##
#query	seed_ortholog	evalue	score	eggNOG_OGs	max_annot_lvl	COG_category	Description	Preferred_name	GOs	EC	KEGG_ko	KEGG_Pathway	KEGG_Module	KEGG_Reaction	KEGG_rclass	BRITE	KEGG_TC	CAZy	BiGG_Reaction	PFAMs
BYD3_k127_1008639_5	362663.ECP_3031	1.23e-06	63.0	COG2604@1|root,COG2604@2|Bacteria	2|Bacteria	S	Protein of unknown function DUF115	-	-	-	-	-	-	-	-	-	-	-	-	Glycos_transf_2,MAF_flag10
BYD3_k127_1008639_4	1218076.BAYB01000024_gene4282	1.806e-33	151.0	COG0438@1|root,COG0438@2|Bacteria,1QUN0@1224|Proteobacteria,2W5SP@28216|Betaproteobacteria,1K3FE@119060|Burkholderiaceae	28216|Betaproteobacteria	M	transferase activity, transferring glycosyl groups	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_1008639_3	329726.AM1_0812	1.751e-41	177.0	COG0656@1|root,COG3103@1|root,COG0656@2|Bacteria,COG3103@2|Bacteria,1G6K0@1117|Cyanobacteria	1117|Cyanobacteria	T	Domain of unknown function (DUF4157)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4157,Ntox11
BYD3_k127_1008639_2	237368.SCABRO_00836	2.632e-79	295.0	COG4447@1|root,COG4447@2|Bacteria	2|Bacteria	S	cellulose binding	-	-	-	-	-	-	-	-	-	-	-	-	Beta_helix
BYD3_k127_1008639_0	926560.KE387023_gene1988	1.668e-180	590.0	COG3292@1|root,COG3292@2|Bacteria	2|Bacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	Cu_amine_oxidN1,Tail_P2_I
BYD3_k127_1008639_1	926560.KE387023_gene1989	1.634e-100	350.0	COG3299@1|root,COG3299@2|Bacteria	2|Bacteria	S	Baseplate J-like protein	-	-	-	-	-	-	-	-	-	-	-	-	Baseplate_J
BYD3_k127_1012594_2	755732.Fluta_0261	3.739e-37	145.0	2DBF0@1|root,2Z8VT@2|Bacteria,4NECW@976|Bacteroidetes	976|Bacteroidetes	S	Psort location CytoplasmicMembrane, score 10.00	-	-	1.3.1.22	ko:K12343	ko00140,map00140	-	R02208,R02497,R08954,R10242	RC00145	ko00000,ko00001,ko01000	-	-	-	Steroid_dh
BYD3_k127_1012594_1	755732.Fluta_0260	4.739e-80	278.0	COG0451@1|root,COG0451@2|Bacteria,4NEMN@976|Bacteroidetes,1IIV6@117743|Flavobacteriia	976|Bacteroidetes	M	NAD dependent epimerase dehydratase family	dfrA	-	1.1.1.219	ko:K00091	-	-	-	-	ko00000,ko01000	-	-	-	Epimerase
BYD3_k127_1012594_0	1122176.KB903609_gene5205	8.982e-137	451.0	COG2819@1|root,COG2819@2|Bacteria,4PMBF@976|Bacteroidetes,1J188@117747|Sphingobacteriia	976|Bacteroidetes	S	Putative esterase	-	-	-	-	-	-	-	-	-	-	-	-	Esterase
BYD3_k127_1012594_3	1233951.IO90_00430	0.0001238	49.0	COG3227@1|root,COG3227@2|Bacteria,4NF8H@976|Bacteroidetes,1HY9Y@117743|Flavobacteriia,3HGWN@358033|Chryseobacterium	976|Bacteroidetes	E	Peptidase propeptide and YPEB domain	-	-	3.4.24.28	ko:K01400	-	-	-	-	ko00000,ko01000,ko01002	-	-	-	FTP,PepSY,Peptidase_M4,Peptidase_M4_C
BYD3_k127_102495_1	760192.Halhy_2631	2.878e-93	312.0	COG0449@1|root,COG0449@2|Bacteria,4NE8Q@976|Bacteroidetes,1IPQZ@117747|Sphingobacteriia	976|Bacteroidetes	M	Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source	glmS	GO:0003674,GO:0003824,GO:0004360,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006002,GO:0006040,GO:0006047,GO:0006139,GO:0006464,GO:0006486,GO:0006487,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008483,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009225,GO:0009987,GO:0016740,GO:0016769,GO:0019538,GO:0019637,GO:0034641,GO:0034645,GO:0036211,GO:0043170,GO:0043412,GO:0043413,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0055086,GO:0070085,GO:0070548,GO:0071704,GO:1901135,GO:1901137,GO:1901360,GO:1901564,GO:1901566,GO:1901576	2.6.1.16	ko:K00820	ko00250,ko00520,ko01100,ko01130,ko04931,map00250,map00520,map01100,map01130,map04931	-	R00768	RC00010,RC00163,RC02752	ko00000,ko00001,ko01000,ko01002	-	-	-	GATase_6,SIS
BYD3_k127_102495_2	984262.SGRA_2293	3.836e-27	127.0	2A79D@1|root,30W5Z@2|Bacteria,4NN88@976|Bacteroidetes,1IRXG@117747|Sphingobacteriia	976|Bacteroidetes	S	Domain of unknown function (DUF4270)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4270
BYD3_k127_102495_0	1122176.KB903560_gene3549	1.105e-101	338.0	COG0297@1|root,COG0297@2|Bacteria,4NFP8@976|Bacteroidetes,1IPR7@117747|Sphingobacteriia	976|Bacteroidetes	G	PFAM Starch synthase, catalytic domain	glgA	-	2.4.1.21	ko:K00703	ko00500,ko01100,ko01110,ko02026,map00500,map01100,map01110,map02026	M00565	R02421	RC00005	ko00000,ko00001,ko00002,ko01000,ko01003	-	GT5	-	Glyco_transf_5
BYD3_k127_1039831_0	1122179.KB890469_gene511	8.325e-179	570.0	COG1109@1|root,COG1109@2|Bacteria,4NFU7@976|Bacteroidetes	976|Bacteroidetes	G	Phosphoglucomutase phosphomannomutase, alpha beta alpha domain II	-	-	-	-	-	-	-	-	-	-	-	-	PGM_PMM_I,PGM_PMM_II,PGM_PMM_III,PGM_PMM_IV
BYD3_k127_1039831_3	1270193.JARP01000003_gene2156	9.54e-71	246.0	2BXI0@1|root,2Z9A2@2|Bacteria,4NFDQ@976|Bacteroidetes,1I0GE@117743|Flavobacteriia,2NUWW@237|Flavobacterium	976|Bacteroidetes	S	Protein of unknown function (DUF2459)	-	-	-	-	-	-	-	-	-	-	-	-	DUF2459
BYD3_k127_1039831_1	1279017.AQYJ01000021_gene2845	5.123e-89	325.0	COG2374@1|root,COG3391@1|root,COG5184@1|root,COG2374@2|Bacteria,COG3391@2|Bacteria,COG5184@2|Bacteria	2|Bacteria	DZ	guanyl-nucleotide exchange factor activity	-	-	3.2.1.14	ko:K01183	ko00520,ko01100,map00520,map01100	-	R01206,R02334	RC00467	ko00000,ko00001,ko01000	-	GH18	-	CHU_C,Exo_endo_phos,LTD,Reprolysin_4,TSP_3
BYD3_k127_1039831_4	1122176.KB903536_gene1852	5.19e-25	123.0	COG4886@1|root,COG4886@2|Bacteria,4NR6Y@976|Bacteroidetes	976|Bacteroidetes	E	PFAM Receptor L domain	-	-	-	-	-	-	-	-	-	-	-	-	Recep_L_domain
BYD3_k127_1039831_2	1122621.ATZA01000034_gene2883	6.57e-85	287.0	COG1807@1|root,COG1807@2|Bacteria,4NHXW@976|Bacteroidetes,1IR5R@117747|Sphingobacteriia	976|Bacteroidetes	M	Dolichyl-phosphate-mannose-protein mannosyltransferase	-	-	-	-	-	-	-	-	-	-	-	-	PMT_2
BYD3_k127_1052581_2	1122176.KB903546_gene1002	5.027e-38	147.0	COG5403@1|root,COG5403@2|Bacteria,4NEX0@976|Bacteroidetes,1IU4E@117747|Sphingobacteriia	976|Bacteroidetes	S	Bacterial protein of unknown function (DUF937)	-	-	-	-	-	-	-	-	-	-	-	-	DUF937
BYD3_k127_1052581_1	1122176.KB903548_gene1213	9.41e-86	298.0	COG1388@1|root,COG1705@1|root,COG1388@2|Bacteria,COG1705@2|Bacteria,4NEER@976|Bacteroidetes,1IP5H@117747|Sphingobacteriia	976|Bacteroidetes	NU	COG1705 Muramidase (flagellum-specific)	lytG	-	-	-	-	-	-	-	-	-	-	-	Glucosaminidase,LysM
BYD3_k127_1052581_0	760192.Halhy_3326	2.089e-181	574.0	COG1060@1|root,COG1060@2|Bacteria,4NGTU@976|Bacteroidetes,1IQI2@117747|Sphingobacteriia	976|Bacteroidetes	H	Radical SAM	mqnC	-	1.21.98.1	ko:K11784	ko00130,ko01110,map00130,map01110	-	R08588	RC02329	ko00000,ko00001,ko01000	-	-	-	Radical_SAM
BYD3_k127_1055840_2	509635.N824_23695	3.872e-76	263.0	COG2820@1|root,COG2820@2|Bacteria,4NG5S@976|Bacteroidetes,1INVP@117747|Sphingobacteriia	976|Bacteroidetes	F	phosphorylase	udp	-	2.4.2.3	ko:K00757	ko00240,ko00983,ko01100,map00240,map00983,map01100	-	R01876,R02484,R08229	RC00063	ko00000,ko00001,ko01000	-	-	-	PNP_UDP_1
BYD3_k127_1055840_3	1123234.AUKI01000016_gene2802	2.482e-39	149.0	COG1393@1|root,COG1393@2|Bacteria,4NSAW@976|Bacteroidetes,1I450@117743|Flavobacteriia	976|Bacteroidetes	P	Belongs to the ArsC family	-	-	1.20.4.1	ko:K00537	-	-	-	-	ko00000,ko01000	-	-	-	ArsC
BYD3_k127_1055840_0	1313421.JHBV01000020_gene5272	3.95e-83	287.0	COG0318@1|root,COG0318@2|Bacteria,4NDXK@976|Bacteroidetes,1IPM0@117747|Sphingobacteriia	976|Bacteroidetes	IQ	Acyl-protein synthetase, LuxE	-	-	-	-	-	-	-	-	-	-	-	-	LuxE
BYD3_k127_1055840_1	1313421.JHBV01000027_gene1739	4.134e-77	268.0	COG0860@1|root,COG0860@2|Bacteria,4NHZA@976|Bacteroidetes	976|Bacteroidetes	M	N-acetylmuramoyl-L-alanine amidase	-	-	3.5.1.28	ko:K01448	ko01503,map01503	M00727	R04112	RC00064,RC00141	ko00000,ko00001,ko00002,ko01000,ko01011,ko03036	-	-	-	Amidase_3
BYD3_k127_1056899_1	1122176.KB903532_gene2744	4.57e-68	246.0	COG3291@1|root,COG3507@1|root,COG3291@2|Bacteria,COG3507@2|Bacteria	2|Bacteria	G	Belongs to the glycosyl hydrolase 43 family	-	-	-	-	-	-	-	-	-	-	-	-	CHU_C,Laminin_G_3,PKD,SprB
BYD3_k127_1056899_0	860228.Ccan_06930	4.211e-73	255.0	COG0805@1|root,COG0805@2|Bacteria,4NEKM@976|Bacteroidetes,1HYNB@117743|Flavobacteriia,1EQZX@1016|Capnocytophaga	976|Bacteroidetes	U	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes	tatC	-	-	ko:K03118	ko03060,ko03070,map03060,map03070	M00336	-	-	ko00000,ko00001,ko00002,ko02044	2.A.64	-	-	TatC
BYD3_k127_1073453_0	1122176.KB903557_gene4043	4.963e-241	785.0	COG4412@1|root,COG4412@2|Bacteria,4PM4A@976|Bacteroidetes,1IWTI@117747|Sphingobacteriia	976|Bacteroidetes	UW	Fungalysin metallopeptidase (M36)	-	-	-	-	-	-	-	-	-	-	-	-	DUF11,FTP,PA,Peptidase_M36,Peptidase_M6
BYD3_k127_1073453_2	468059.AUHA01000002_gene859	4.936e-39	150.0	2BW9M@1|root,32RJH@2|Bacteria,4NTHJ@976|Bacteroidetes	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_1073453_1	1267211.KI669560_gene1242	8.818e-86	289.0	COG1073@1|root,COG1073@2|Bacteria,4PN7H@976|Bacteroidetes,1J0MK@117747|Sphingobacteriia	976|Bacteroidetes	S	Alpha/beta hydrolase family	-	-	-	-	-	-	-	-	-	-	-	-	Abhydrolase_6
BYD3_k127_1074823_2	1122176.KB903547_gene1123	6.223e-187	593.0	COG0621@1|root,COG0621@2|Bacteria,4NEJK@976|Bacteroidetes,1IP0Q@117747|Sphingobacteriia	976|Bacteroidetes	J	Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12	rimO	-	2.8.4.4	ko:K14441	-	-	R10652	RC00003,RC03217	ko00000,ko01000,ko03009	-	-	-	Radical_SAM,TRAM,UPF0004
BYD3_k127_1074823_1	1121904.ARBP01000007_gene2888	3.189e-226	735.0	COG0612@1|root,COG0612@2|Bacteria,4NFY0@976|Bacteroidetes,47MF6@768503|Cytophagia	976|Bacteroidetes	S	Belongs to the peptidase M16 family	pqqL	-	-	ko:K07263	-	-	-	-	ko00000,ko01000,ko01002	-	-	-	Peptidase_M16,Peptidase_M16_C
BYD3_k127_1074823_5	1189619.pgond44_06180	6.423e-30	131.0	COG0739@1|root,COG0739@2|Bacteria,4PCUY@976|Bacteroidetes,1IDCY@117743|Flavobacteriia,4C4FG@83612|Psychroflexus	976|Bacteroidetes	M	heme binding	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_1074823_4	746697.Aeqsu_1012	8.509e-35	145.0	2DQEX@1|root,336EW@2|Bacteria,4PP00@976|Bacteroidetes	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_1074823_0	760192.Halhy_1093	0.0	1075.0	COG0249@1|root,COG0249@2|Bacteria,4NEGB@976|Bacteroidetes,1IR7Y@117747|Sphingobacteriia	976|Bacteroidetes	L	that it carries out the mismatch recognition step. This protein has a weak ATPase activity	mutS	GO:0003674,GO:0003676,GO:0003677,GO:0003684,GO:0003690,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008094,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0030983,GO:0032300,GO:0032991,GO:0033554,GO:0034641,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1990391	-	ko:K03555	ko03430,map03430	-	-	-	ko00000,ko00001,ko03400	-	-	-	MutS_I,MutS_II,MutS_III,MutS_IV,MutS_V
BYD3_k127_1074823_3	760192.Halhy_6213	7.684e-45	167.0	COG1652@1|root,COG1652@2|Bacteria,4NMED@976|Bacteroidetes	976|Bacteroidetes	S	PFAM Peptidoglycan-binding lysin domain	-	-	-	-	-	-	-	-	-	-	-	-	BON,LysM
BYD3_k127_1074823_7	563031.HMPREF0666_01016	1.426e-06	51.0	COG1722@1|root,COG1722@2|Bacteria,4NXJV@976|Bacteroidetes	976|Bacteroidetes	L	Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides	xseB	-	3.1.11.6	ko:K03602	ko03430,map03430	-	-	-	ko00000,ko00001,ko01000,ko03400	-	-	-	Exonuc_VII_S
BYD3_k127_1078359_1	1280673.AUJJ01000008_gene696	4.231e-65	236.0	COG0438@1|root,COG0438@2|Bacteria,1V2NV@1239|Firmicutes,25ERN@186801|Clostridia,4BZM9@830|Butyrivibrio	186801|Clostridia	M	Glycosyl transferase 4-like domain	-	-	2.4.1.348	ko:K06338,ko:K12995	-	-	-	-	ko00000,ko01000,ko01003,ko01005	-	GT4	-	Glyco_transf_4,Glycos_transf_1
BYD3_k127_1078359_2	1499967.BAYZ01000158_gene460	2.18e-16	90.0	COG4424@1|root,COG4424@2|Bacteria,2NQ7W@2323|unclassified Bacteria	2|Bacteria	S	Sulfotransferase	-	-	-	-	-	-	-	-	-	-	-	-	Sulfotransfer_1,Sulfotransfer_3
BYD3_k127_1078359_0	760192.Halhy_1231	1.206e-175	555.0	2CD20@1|root,2Z7SQ@2|Bacteria,4NEQ1@976|Bacteroidetes,1IPF3@117747|Sphingobacteriia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_1082775_2	1122176.KB903545_gene818	2.713e-55	197.0	COG1528@1|root,COG1528@2|Bacteria,4NGS7@976|Bacteroidetes,1ITKI@117747|Sphingobacteriia	976|Bacteroidetes	P	Iron-storage protein	ftnA	-	1.16.3.2	ko:K02217	-	-	-	-	ko00000,ko01000	-	-	-	Ferritin
BYD3_k127_1082775_1	925409.KI911562_gene1788	7.698e-122	398.0	COG0859@1|root,COG0859@2|Bacteria,4PKBY@976|Bacteroidetes,1IWTZ@117747|Sphingobacteriia	976|Bacteroidetes	M	Glycosyltransferase family 9 (heptosyltransferase)	-	-	-	ko:K02843	ko00540,ko01100,map00540,map01100	M00080	-	-	ko00000,ko00001,ko00002,ko01000,ko01003,ko01005	-	GT9	-	Glyco_transf_9
BYD3_k127_1082775_0	1123234.AUKI01000011_gene1098	3.921e-235	751.0	COG3934@1|root,COG3934@2|Bacteria,4NFVS@976|Bacteroidetes,1HZVW@117743|Flavobacteriia	976|Bacteroidetes	G	Belongs to the glycosyl hydrolase 5 (cellulase A) family	-	-	-	-	-	-	-	-	-	-	-	-	Cellulase
BYD3_k127_1091518_0	761193.Runsl_5360	2.113e-90	311.0	COG4636@1|root,COG4636@2|Bacteria,4NFKR@976|Bacteroidetes,47K44@768503|Cytophagia	976|Bacteroidetes	S	Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella	-	-	-	-	-	-	-	-	-	-	-	-	VCBS
BYD3_k127_1091518_1	714943.Mucpa_4707	1.27e-43	162.0	COG1801@1|root,COG1801@2|Bacteria,4NHAD@976|Bacteroidetes,1IP8N@117747|Sphingobacteriia	976|Bacteroidetes	S	Protein of unknown function DUF72	-	-	-	-	-	-	-	-	-	-	-	-	DUF72
BYD3_k127_1102805_2	926562.Oweho_2444	1.23e-43	173.0	COG1807@1|root,COG1807@2|Bacteria,4PB0R@976|Bacteroidetes,1I8NW@117743|Flavobacteriia,2PBV3@246874|Cryomorphaceae	976|Bacteroidetes	M	4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_1102805_4	1237149.C900_01363	4.097e-15	80.0	2DZQQ@1|root,32VGE@2|Bacteria,4NYQ2@976|Bacteroidetes	976|Bacteroidetes	S	Transmembrane family 220, helix	-	-	-	-	-	-	-	-	-	-	-	-	TMEM220
BYD3_k127_1102805_0	925409.KI911562_gene295	2.995e-121	398.0	COG1087@1|root,COG1087@2|Bacteria,4NEM9@976|Bacteroidetes,1INXE@117747|Sphingobacteriia	976|Bacteroidetes	M	PFAM NAD dependent epimerase dehydratase family	galE	-	5.1.3.2	ko:K01784	ko00052,ko00520,ko01100,map00052,map00520,map01100	M00361,M00362,M00632	R00291,R02984	RC00289	ko00000,ko00001,ko00002,ko01000	-	-	-	Epimerase,GDP_Man_Dehyd
BYD3_k127_1102805_1	761193.Runsl_2959	9.727e-56	201.0	COG1309@1|root,COG1309@2|Bacteria,4NKU9@976|Bacteroidetes,47MM9@768503|Cytophagia	976|Bacteroidetes	K	WHG domain	-	-	-	-	-	-	-	-	-	-	-	-	TetR_N,WHG
BYD3_k127_1102805_3	1500281.JQKZ01000006_gene3724	1.528e-23	104.0	COG1538@1|root,COG1538@2|Bacteria,4NE4S@976|Bacteroidetes,1HYS6@117743|Flavobacteriia,3ZTE3@59732|Chryseobacterium	976|Bacteroidetes	MU	Outer membrane efflux protein	-	-	-	-	-	-	-	-	-	-	-	-	OEP
BYD3_k127_1112271_0	1122176.KB903565_gene3414	5.714e-141	456.0	COG1932@1|root,COG1932@2|Bacteria,4NE06@976|Bacteroidetes,1IP7N@117747|Sphingobacteriia	976|Bacteroidetes	E	Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine	serC	GO:0003674,GO:0003824,GO:0004648,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006563,GO:0006564,GO:0006807,GO:0008150,GO:0008152,GO:0008483,GO:0008652,GO:0009058,GO:0009069,GO:0009070,GO:0009987,GO:0016053,GO:0016740,GO:0016769,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607	2.6.1.52	ko:K00831	ko00260,ko00680,ko00750,ko01100,ko01120,ko01130,ko01200,ko01230,map00260,map00680,map00750,map01100,map01120,map01130,map01200,map01230	M00020,M00124	R04173,R05085	RC00006,RC00036	ko00000,ko00001,ko00002,ko01000,ko01007	-	-	-	Aminotran_5
BYD3_k127_1112271_1	1122176.KB903565_gene3415	1.375e-44	171.0	COG1451@1|root,COG1451@2|Bacteria,4NIY4@976|Bacteroidetes,1IUYI@117747|Sphingobacteriia	976|Bacteroidetes	S	Protein of unknown function DUF45	-	-	-	ko:K07043	-	-	-	-	ko00000	-	-	-	DUF45
BYD3_k127_1141417_3	1313421.JHBV01000027_gene1704	4.495e-46	170.0	COG4974@1|root,COG4974@2|Bacteria,4NGQW@976|Bacteroidetes,1IP2Y@117747|Sphingobacteriia	976|Bacteroidetes	L	Belongs to the 'phage' integrase family. XerC subfamily	xerC	-	-	ko:K03733	-	-	-	-	ko00000,ko03036	-	-	-	Phage_int_SAM_1,Phage_integrase
BYD3_k127_1141417_4	1122176.KB903532_gene2546	2.5e-28	119.0	COG1544@1|root,COG1544@2|Bacteria,4NUME@976|Bacteroidetes,1ITNJ@117747|Sphingobacteriia	976|Bacteroidetes	J	PFAM Sigma 54 modulation protein S30EA ribosomal protein	raiA	-	-	ko:K05808	-	-	-	-	ko00000,ko03009	-	-	-	Ribosomal_S30AE
BYD3_k127_1141417_0	1122176.KB903532_gene2544	1.919e-217	679.0	COG0050@1|root,COG0050@2|Bacteria,4NEWS@976|Bacteroidetes,1IPDP@117747|Sphingobacteriia	976|Bacteroidetes	J	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis	tuf	-	-	ko:K02358	-	-	-	-	ko00000,ko03012,ko03029,ko04147	-	-	-	GTP_EFTU,GTP_EFTU_D2,GTP_EFTU_D3
BYD3_k127_1141417_5	1122176.KB903532_gene2543	1.114e-14	75.0	COG0690@1|root,COG0690@2|Bacteria,4PGJJ@976|Bacteroidetes,1ITUV@117747|Sphingobacteriia	976|Bacteroidetes	U	Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation	secE	-	-	ko:K03073	ko02024,ko03060,ko03070,map02024,map03060,map03070	M00335	-	-	ko00000,ko00001,ko00002,ko02044	3.A.5.1,3.A.5.2	-	-	SecE
BYD3_k127_1141417_1	1122176.KB903532_gene2542	1.88e-90	300.0	COG0250@1|root,COG0250@2|Bacteria,4NF2X@976|Bacteroidetes,1INR8@117747|Sphingobacteriia	976|Bacteroidetes	K	Participates in transcription elongation, termination and antitermination	nusG	-	-	ko:K02601	-	-	-	-	ko00000,ko03009,ko03021	-	-	-	KOW,NusG
BYD3_k127_1141417_2	1406840.Q763_14610	6.977e-68	233.0	COG0080@1|root,COG0080@2|Bacteria,4NM60@976|Bacteroidetes,1I18G@117743|Flavobacteriia,2NSUS@237|Flavobacterium	976|Bacteroidetes	J	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors	rplK	GO:0000027,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904	-	ko:K02867	ko03010,map03010	M00178,M00179	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_L11,Ribosomal_L11_N
BYD3_k127_1211441_1	1122179.KB890414_gene1846	1.246e-115	385.0	COG0845@1|root,COG0845@2|Bacteria,4NGSC@976|Bacteroidetes,1IWV8@117747|Sphingobacteriia	976|Bacteroidetes	M	HlyD family secretion protein	-	-	-	-	-	-	-	-	-	-	-	-	HlyD,HlyD_3,HlyD_D23
BYD3_k127_1211441_0	1122179.KB890414_gene1845	8.187e-137	449.0	COG0577@1|root,COG0577@2|Bacteria,4NEBD@976|Bacteroidetes,1IQQ0@117747|Sphingobacteriia	976|Bacteroidetes	V	COG0577 ABC-type antimicrobial peptide transport system permease component	-	-	-	ko:K02004	-	M00258	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	FtsX,MacB_PCD
BYD3_k127_1213742_3	1429851.X548_10700	3.361e-50	191.0	COG2911@1|root,COG2911@2|Bacteria,1NHQB@1224|Proteobacteria,1SVEG@1236|Gammaproteobacteria,1XD9M@135614|Xanthomonadales	135614|Xanthomonadales	S	Porin subfamily	-	-	-	-	-	-	-	-	-	-	-	-	Porin_2
BYD3_k127_1213742_1	700598.Niako_2137	5.33e-101	336.0	2C0ZU@1|root,32R7S@2|Bacteria,4P4KK@976|Bacteroidetes	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_1213742_0	1121373.KB903664_gene2651	1.318e-200	649.0	COG3087@1|root,COG3087@2|Bacteria,4PNV5@976|Bacteroidetes	976|Bacteroidetes	D	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_1213742_4	1239962.C943_00137	4.547e-39	151.0	2CWBN@1|root,32SZD@2|Bacteria,4NU6S@976|Bacteroidetes	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_1213742_5	1347342.BN863_7060	8.387e-31	129.0	2C7HJ@1|root,309CJ@2|Bacteria,4NPTZ@976|Bacteroidetes,1I22Y@117743|Flavobacteriia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	OMP_b-brl
BYD3_k127_1213742_2	1267211.KI669560_gene2254	3.684e-68	251.0	COG2885@1|root,COG2885@2|Bacteria,4NE8J@976|Bacteroidetes	976|Bacteroidetes	M	Belongs to the ompA family	-	-	-	-	-	-	-	-	-	-	-	-	OmpA,TSP_3
BYD3_k127_1233142_4	404380.Gbem_1251	4.255e-08	55.0	COG2846@1|root,COG2846@2|Bacteria,1MVCQ@1224|Proteobacteria,42NXK@68525|delta/epsilon subdivisions,2WMGN@28221|Deltaproteobacteria	28221|Deltaproteobacteria	C	Di-iron-containing protein involved in the repair of iron-sulfur clusters	-	-	-	ko:K07322	-	-	-	-	ko00000	-	-	-	Hemerythrin,ScdA_N
BYD3_k127_1233142_0	1356852.N008_04075	2.572e-143	471.0	COG2010@1|root,COG2010@2|Bacteria,4NEEJ@976|Bacteroidetes,47M30@768503|Cytophagia	976|Bacteroidetes	C	Cytochrome c	-	-	-	-	-	-	-	-	-	-	-	-	Cu2_monoox_C,FlgD_ig
BYD3_k127_1233142_2	1356852.N008_04080	6.036e-25	112.0	COG1225@1|root,COG1225@2|Bacteria,4PNAN@976|Bacteroidetes,47SBD@768503|Cytophagia	976|Bacteroidetes	O	AhpC/TSA family	-	-	-	-	-	-	-	-	-	-	-	-	AhpC-TSA
BYD3_k127_1233142_5	873517.HMPREF1977_0275	4.304e-06	54.0	2EENT@1|root,338GM@2|Bacteria,4NV31@976|Bacteroidetes,1IEEG@117743|Flavobacteriia,1ES1R@1016|Capnocytophaga	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_1233142_3	743722.Sph21_0291	4.474e-13	75.0	COG2608@1|root,COG2608@2|Bacteria,4NUTQ@976|Bacteroidetes,1ITC9@117747|Sphingobacteriia	976|Bacteroidetes	P	Heavy-metal-associated domain	-	-	-	ko:K08364	-	-	-	-	ko00000,ko02000	1.A.72.1	-	-	HMA
BYD3_k127_1233142_1	1123248.KB893321_gene543	2.7e-116	390.0	COG1629@1|root,COG2608@1|root,COG2608@2|Bacteria,COG4771@2|Bacteria,4NE7A@976|Bacteroidetes,1IP85@117747|Sphingobacteriia	976|Bacteroidetes	P	TonB-dependent receptor	-	-	-	-	-	-	-	-	-	-	-	-	CarbopepD_reg_2,HMA,Plug,TonB_dep_Rec
BYD3_k127_1242220_0	643867.Ftrac_1564	4.11e-40	156.0	COG2120@1|root,COG2120@2|Bacteria	2|Bacteria	S	N-acetylglucosaminylinositol deacetylase activity	-	-	-	-	-	-	-	-	-	-	-	-	PIG-L
BYD3_k127_1242220_1	1121895.Q765_12425	4.243e-06	57.0	COG3637@1|root,COG3637@2|Bacteria,4PMMX@976|Bacteroidetes,1I2W1@117743|Flavobacteriia,2P0SQ@237|Flavobacterium	976|Bacteroidetes	M	Outer membrane protein beta-barrel domain	-	-	-	-	-	-	-	-	-	-	-	-	OMP_b-brl_2
BYD3_k127_1248698_13	439235.Dalk_5269	0.0007678	48.0	COG0457@1|root,COG1807@1|root,COG0457@2|Bacteria,COG1807@2|Bacteria,1R09K@1224|Proteobacteria	1224|Proteobacteria	M	Tetratricopeptide repeat	-	-	-	-	-	-	-	-	-	-	-	-	TPR_11,TPR_2
BYD3_k127_1248698_7	313594.PI23P_02957	1.295e-45	186.0	COG0457@1|root,COG0457@2|Bacteria,4NERG@976|Bacteroidetes,1HYP9@117743|Flavobacteriia,3VVF0@52959|Polaribacter	976|Bacteroidetes	S	Oxygen tolerance	batD	-	-	-	-	-	-	-	-	-	-	-	BatD,TPR_2
BYD3_k127_1248698_10	760192.Halhy_2698	7.313e-26	116.0	COG0457@1|root,COG0457@2|Bacteria,4NH2K@976|Bacteroidetes,1ISXE@117747|Sphingobacteriia	976|Bacteroidetes	S	TPR repeat	batC	-	-	-	-	-	-	-	-	-	-	-	TPR_1,TPR_11,TPR_16,TPR_17,TPR_2,TPR_8
BYD3_k127_1248698_4	1122176.KB903555_gene3783	7.842e-62	225.0	COG2304@1|root,COG2304@2|Bacteria,4NF7Y@976|Bacteroidetes,1IR1C@117747|Sphingobacteriia	976|Bacteroidetes	S	von Willebrand factor, type A	batB	-	-	ko:K07114	-	-	-	-	ko00000,ko02000	1.A.13.2.2,1.A.13.2.3	-	-	BatA,VWA,VWA_2
BYD3_k127_1248698_0	760192.Halhy_0330	2.974e-110	362.0	COG0811@1|root,COG0811@2|Bacteria,4NE8M@976|Bacteroidetes,1INP5@117747|Sphingobacteriia	976|Bacteroidetes	U	PFAM MotA TolQ ExbB proton channel	exbB	-	-	ko:K03561	-	-	-	-	ko00000,ko02000	1.A.30.2.1	-	-	MotA_ExbB
BYD3_k127_1248698_6	760192.Halhy_0331	2.767e-59	211.0	COG0848@1|root,COG0848@2|Bacteria,4NMT4@976|Bacteroidetes,1IRXT@117747|Sphingobacteriia	976|Bacteroidetes	U	PFAM Biopolymer transport protein ExbD TolR	exbD1	-	-	-	-	-	-	-	-	-	-	-	ExbD
BYD3_k127_1248698_5	760192.Halhy_0332	4.285e-61	216.0	COG0848@1|root,COG0848@2|Bacteria,4NMQ8@976|Bacteroidetes,1ITNF@117747|Sphingobacteriia	976|Bacteroidetes	U	PFAM Biopolymer transport protein ExbD TolR	exbD2	-	-	-	-	-	-	-	-	-	-	-	ExbD
BYD3_k127_1248698_3	760192.Halhy_0333	5.008e-69	243.0	COG0810@1|root,COG0810@2|Bacteria,4NFH6@976|Bacteroidetes,1ISCX@117747|Sphingobacteriia	976|Bacteroidetes	U	Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins	tonB2	-	-	ko:K03832	-	-	-	-	ko00000,ko02000	2.C.1.1	-	-	TonB_C
BYD3_k127_1248698_8	760192.Halhy_0335	4.255e-45	175.0	COG0226@1|root,COG0226@2|Bacteria,4NH1N@976|Bacteroidetes,1IRT8@117747|Sphingobacteriia	976|Bacteroidetes	P	ABC-type phosphate transport system periplasmic	-	-	-	ko:K02040	ko02010,ko02020,ko05152,map02010,map02020,map05152	M00222	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.7	-	-	PBP_like_2
BYD3_k127_1248698_2	760192.Halhy_0336	1.965e-95	334.0	COG0457@1|root,COG0457@2|Bacteria,4NIEU@976|Bacteroidetes,1IPR2@117747|Sphingobacteriia	976|Bacteroidetes	NU	PFAM Tetratricopeptide	-	-	-	-	-	-	-	-	-	-	-	-	TPR_16,TPR_19,TPR_2,TPR_8
BYD3_k127_1248698_1	1122176.KB903555_gene3784	1.916e-99	336.0	COG2304@1|root,COG2304@2|Bacteria,4NDUC@976|Bacteroidetes,1IP6P@117747|Sphingobacteriia	976|Bacteroidetes	S	von Willebrand factor, type A	batA	-	-	ko:K07114	-	-	-	-	ko00000,ko02000	1.A.13.2.2,1.A.13.2.3	-	-	BatA,VWA
BYD3_k127_1248698_9	485917.Phep_1480	1.063e-26	121.0	COG3088@1|root,COG3088@2|Bacteria,4NGHU@976|Bacteroidetes,1ISTW@117747|Sphingobacteriia	976|Bacteroidetes	O	Psort location CytoplasmicMembrane, score	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_1248698_12	1313421.JHBV01000031_gene1483	0.0001603	46.0	COG1721@1|root,COG1721@2|Bacteria,4NE2N@976|Bacteroidetes,1IR6K@117747|Sphingobacteriia	976|Bacteroidetes	S	protein (some members contain a von Willebrand factor type A (vWA) domain)	-	-	-	-	-	-	-	-	-	-	-	-	DUF58
BYD3_k127_1262882_3	760192.Halhy_4232	2.064e-78	264.0	COG2204@1|root,COG2204@2|Bacteria,4NE72@976|Bacteroidetes,1IP34@117747|Sphingobacteriia	976|Bacteroidetes	T	COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains	porX	-	-	-	-	-	-	-	-	-	-	-	PglZ,Response_reg
BYD3_k127_1262882_1	760192.Halhy_4232	9.82e-158	504.0	COG2204@1|root,COG2204@2|Bacteria,4NE72@976|Bacteroidetes,1IP34@117747|Sphingobacteriia	976|Bacteroidetes	T	COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains	porX	-	-	-	-	-	-	-	-	-	-	-	PglZ,Response_reg
BYD3_k127_1262882_2	1122179.KB890413_gene4874	3.673e-116	386.0	COG1078@1|root,COG1078@2|Bacteria,4NE1T@976|Bacteroidetes,1IQIS@117747|Sphingobacteriia	976|Bacteroidetes	S	phosphohydrolase	-	-	-	ko:K06885	-	-	-	-	ko00000	-	-	-	HD
BYD3_k127_1262882_0	760192.Halhy_2715	1.591e-201	634.0	COG0112@1|root,COG0112@2|Bacteria,4NE30@976|Bacteroidetes,1IPUW@117747|Sphingobacteriia	976|Bacteroidetes	E	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism	glyA	-	2.1.2.1	ko:K00600	ko00260,ko00460,ko00630,ko00670,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko01523,map00260,map00460,map00630,map00670,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map01523	M00140,M00141,M00346,M00532	R00945,R09099	RC00022,RC00112,RC01583,RC02958	ko00000,ko00001,ko00002,ko01000	-	-	-	SHMT
BYD3_k127_1262882_4	1313421.JHBV01000022_gene4646	8.007e-22	100.0	COG3291@1|root,COG3291@2|Bacteria,4NNVK@976|Bacteroidetes,1ISKM@117747|Sphingobacteriia	976|Bacteroidetes	S	C-terminal domain of CHU protein family	-	-	-	-	-	-	-	-	-	-	-	-	CHU_C,PKD,SprB
BYD3_k127_1296968_5	313606.M23134_06227	1.199e-43	161.0	COG0476@1|root,COG0476@2|Bacteria,4NFUD@976|Bacteroidetes,47KG8@768503|Cytophagia	976|Bacteroidetes	H	MoeZ MoeB domain	moeZ	-	2.7.7.80,2.8.1.11	ko:K21029,ko:K21147	ko04122,map04122	-	R07459,R07461	RC00043	ko00000,ko00001,ko01000	-	-	-	Rhodanese,ThiF
BYD3_k127_1296968_8	309807.SRU_2041	2.118e-20	93.0	COG1977@1|root,COG1977@2|Bacteria,4NVU9@976|Bacteroidetes,1FJK9@1100069|Bacteroidetes Order II. Incertae sedis	976|Bacteroidetes	H	ThiS family	-	-	-	ko:K03636	ko04122,map04122	-	-	-	ko00000,ko00001	-	-	-	ThiS
BYD3_k127_1296968_6	313606.M23134_06229	1.491e-33	135.0	COG1310@1|root,COG1310@2|Bacteria,4NTI0@976|Bacteroidetes,47RVG@768503|Cytophagia	976|Bacteroidetes	S	JAB/MPN domain	-	-	3.13.1.6	ko:K21140	ko04122,map04122	-	R11524	RC00064,RC00090	ko00000,ko00001,ko01000	-	-	-	Prok-JAB
BYD3_k127_1296968_4	1121904.ARBP01000019_gene2810	3.414e-95	323.0	COG0031@1|root,COG0031@2|Bacteria,4NF7E@976|Bacteroidetes,47J9D@768503|Cytophagia	976|Bacteroidetes	E	Belongs to the cysteine synthase cystathionine beta- synthase family	cysM	-	2.5.1.47	ko:K12339	ko00270,ko00920,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00270,map00920,map01100,map01110,map01120,map01130,map01200,map01230	M00021	R00897,R03132,R03601,R04859	RC00020,RC02814,RC02821,RC02876	ko00000,ko00001,ko00002,ko01000	-	-	-	PALP
BYD3_k127_1296968_1	1122176.KB903547_gene1125	1.775e-126	411.0	COG0152@1|root,COG0152@2|Bacteria,4NF1Z@976|Bacteroidetes,1INM8@117747|Sphingobacteriia	976|Bacteroidetes	F	Phosphoribosylaminoimidazolesuccinocarboxamide synthase	purC	GO:0003674,GO:0003824,GO:0004639,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006163,GO:0006164,GO:0006188,GO:0006189,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0016881,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046040,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576	6.3.2.6	ko:K01923	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	M00048	R04591	RC00064,RC00162	ko00000,ko00001,ko00002,ko01000	-	-	-	SAICAR_synt
BYD3_k127_1296968_7	228410.NE0218	4.606e-22	108.0	COG0823@1|root,COG0823@2|Bacteria,1MV09@1224|Proteobacteria,2VH9R@28216|Betaproteobacteria,372HA@32003|Nitrosomonadales	28216|Betaproteobacteria	U	Involved in the TonB-independent uptake of proteins	tolB	-	-	ko:K03641	-	-	-	-	ko00000,ko02000	2.C.1.2	-	-	PD40,TolB_N
BYD3_k127_1296968_3	1123276.KB893290_gene5189	3.907e-104	352.0	COG2072@1|root,COG2072@2|Bacteria,4NGC0@976|Bacteroidetes,47S96@768503|Cytophagia	976|Bacteroidetes	P	Flavin-binding monooxygenase-like	-	-	-	ko:K07222	-	-	-	-	ko00000	-	-	-	Pyr_redox_3
BYD3_k127_1296968_0	1304874.JAFY01000005_gene1625	5.553e-153	493.0	COG0520@1|root,COG0520@2|Bacteria,3TAAX@508458|Synergistetes	508458|Synergistetes	E	TIGRFAM cysteine desulfurase family protein, VC1184 subfamily	-	-	-	-	-	-	-	-	-	-	-	-	Aminotran_5
BYD3_k127_1296968_2	1408473.JHXO01000005_gene1863	2.566e-117	390.0	COG4292@1|root,COG4292@2|Bacteria	2|Bacteria	S	Bacterial low temperature requirement A protein (LtrA)	ltrA	-	-	-	-	-	-	-	-	-	-	-	LtrA
BYD3_k127_1296968_9	585.DR95_3473	3.732e-11	66.0	COG2501@1|root,COG2501@2|Bacteria,1N7NW@1224|Proteobacteria,1SCJU@1236|Gammaproteobacteria,3Z30H@583|Proteus	1236|Gammaproteobacteria	S	S4 domain	ybcJ	GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576	-	ko:K14761	-	-	-	-	ko00000,ko03009	-	-	-	S4_2
BYD3_k127_1296968_11	1121889.AUDM01000008_gene781	8.777e-07	61.0	COG1404@1|root,COG4935@1|root,COG1404@2|Bacteria,COG4935@2|Bacteria,4NFMW@976|Bacteroidetes,1I06M@117743|Flavobacteriia,2NUXW@237|Flavobacterium	976|Bacteroidetes	O	Subtilase family	-	-	-	-	-	-	-	-	-	-	-	-	PKD,P_proprotein,Peptidase_S8,fn3
BYD3_k127_1296968_10	1094980.Mpsy_2509	3.456e-08	66.0	arCOG00567@1|root,arCOG00567@2157|Archaea,2XVU1@28890|Euryarchaeota,2NA3X@224756|Methanomicrobia	224756|Methanomicrobia	M	glycosyl transferase, family 39	-	-	-	-	-	-	-	-	-	-	-	-	PMT_2
BYD3_k127_1305650_4	760192.Halhy_2634	5.989e-62	223.0	COG0414@1|root,COG0414@2|Bacteria,4NFT9@976|Bacteroidetes,1IQ34@117747|Sphingobacteriia	976|Bacteroidetes	H	Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate	panC	GO:0003674,GO:0003824,GO:0004592,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006573,GO:0006575,GO:0006732,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009081,GO:0009108,GO:0009110,GO:0009987,GO:0015939,GO:0015940,GO:0016053,GO:0016874,GO:0016879,GO:0016881,GO:0019752,GO:0032787,GO:0033317,GO:0034641,GO:0042364,GO:0042398,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0051186,GO:0051188,GO:0071704,GO:0072330,GO:1901564,GO:1901566,GO:1901576,GO:1901605	6.3.2.1	ko:K01918	ko00410,ko00770,ko01100,ko01110,map00410,map00770,map01100,map01110	M00119	R02473	RC00096,RC00141	ko00000,ko00001,ko00002,ko01000	-	-	-	Pantoate_ligase
BYD3_k127_1305650_6	929703.KE386491_gene565	1.378e-47	173.0	COG0853@1|root,COG0853@2|Bacteria,4NQ42@976|Bacteroidetes,47QA8@768503|Cytophagia	976|Bacteroidetes	H	Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine	panD	-	4.1.1.11	ko:K01579	ko00410,ko00770,ko01100,ko01110,map00410,map00770,map01100,map01110	M00119	R00489	RC00299	ko00000,ko00001,ko00002,ko01000	-	-	-	Asp_decarbox
BYD3_k127_1305650_0	1122176.KB903548_gene1143	1.576e-98	332.0	COG0392@1|root,COG0392@2|Bacteria,4NGPD@976|Bacteroidetes,1ISJK@117747|Sphingobacteriia	976|Bacteroidetes	S	Lysylphosphatidylglycerol synthase TM region	-	-	-	ko:K07027	-	-	-	-	ko00000,ko02000	4.D.2	-	-	LPG_synthase_TM
BYD3_k127_1305650_5	1313301.AUGC01000003_gene2151	7.058e-52	190.0	COG0615@1|root,COG0615@2|Bacteria,4NNKK@976|Bacteroidetes	976|Bacteroidetes	H	Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose	-	-	2.7.1.167,2.7.7.70	ko:K03272	ko00540,ko01100,map00540,map01100	M00064	R05644,R05646	RC00002,RC00078	ko00000,ko00001,ko00002,ko01000,ko01005	-	-	-	CTP_transf_like
BYD3_k127_1305650_1	760192.Halhy_4009	1.423e-90	305.0	COG0327@1|root,COG0327@2|Bacteria,4NF51@976|Bacteroidetes	976|Bacteroidetes	S	Belongs to the GTP cyclohydrolase I type 2 NIF3 family	yqfO	-	-	-	-	-	-	-	-	-	-	-	NIF3
BYD3_k127_1305650_3	1122176.KB903544_gene723	4.939e-79	271.0	COG1579@1|root,COG1579@2|Bacteria,4NE36@976|Bacteroidetes,1IS0F@117747|Sphingobacteriia	976|Bacteroidetes	S	C4-type zinc ribbon domain	-	-	-	ko:K07164	-	-	-	-	ko00000	-	-	-	zf-RING_7
BYD3_k127_1305650_2	1122176.KB903544_gene722	2.088e-90	316.0	COG0457@1|root,COG0457@2|Bacteria,4NG8A@976|Bacteroidetes,1IP1E@117747|Sphingobacteriia	976|Bacteroidetes	S	TPR repeat-containing protein	-	-	-	-	-	-	-	-	-	-	-	-	TPR_12,TPR_7,TPR_8
BYD3_k127_1305650_7	1184267.A11Q_1414	3.655e-24	108.0	COG3011@1|root,COG3011@2|Bacteria,1N0YV@1224|Proteobacteria,42VUX@68525|delta/epsilon subdivisions,2MT7T@213481|Bdellovibrionales,2WW8H@28221|Deltaproteobacteria	213481|Bdellovibrionales	S	Protein of unknown function, DUF393	-	-	-	-	-	-	-	-	-	-	-	-	DUF393
BYD3_k127_1305650_8	1239962.C943_03565	4.307e-22	98.0	COG1066@1|root,COG1066@2|Bacteria,4NEYA@976|Bacteroidetes,47K0I@768503|Cytophagia	976|Bacteroidetes	O	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function	radA	-	-	ko:K04485	-	-	-	-	ko00000,ko03400	-	-	-	AAA_25,ATPase,ChlI
BYD3_k127_1322532_0	761193.Runsl_4908	2.62e-58	224.0	COG0823@1|root,COG2885@1|root,COG0823@2|Bacteria,COG2885@2|Bacteria,4NEND@976|Bacteroidetes,47KG7@768503|Cytophagia	976|Bacteroidetes	M	Belongs to the ompA family	-	-	-	-	-	-	-	-	-	-	-	-	OmpA,PD40
BYD3_k127_1322532_2	760192.Halhy_4503	1.817e-49	181.0	COG2318@1|root,COG2318@2|Bacteria,4NQEI@976|Bacteroidetes	976|Bacteroidetes	S	Protein of unknown function (DUF1572)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1572
BYD3_k127_1322532_1	1122176.KB903543_gene636	2.161e-57	207.0	COG1040@1|root,COG1040@2|Bacteria,4NNI1@976|Bacteroidetes,1IRYV@117747|Sphingobacteriia	976|Bacteroidetes	S	PFAM Phosphoribosyl transferase domain	comF	-	2.4.2.14	ko:K00764	ko00230,ko00250,ko01100,ko01110,ko01130,map00230,map00250,map01100,map01110,map01130	M00048	R01072	RC00010,RC02724,RC02752	ko00000,ko00001,ko00002,ko01000,ko01002	-	-	-	Pribosyltran
BYD3_k127_1322532_3	484018.BACPLE_02980	2.407e-06	57.0	COG1595@1|root,COG1595@2|Bacteria,4NTAA@976|Bacteroidetes,2FUI3@200643|Bacteroidia,4ARTM@815|Bacteroidaceae	976|Bacteroidetes	K	COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog	-	-	-	ko:K03088	-	-	-	-	ko00000,ko03021	-	-	-	Sigma70_r2
BYD3_k127_1340337_0	1408433.JHXV01000009_gene1334	8.364e-12	78.0	COG3291@1|root,COG3291@2|Bacteria,4PI0I@976|Bacteroidetes,1I5WG@117743|Flavobacteriia,2PBH4@246874|Cryomorphaceae	976|Bacteroidetes	S	C-terminal domain of CHU protein family	-	-	-	-	-	-	-	-	-	-	-	-	CHU_C,PKD
BYD3_k127_1354791_1	1122179.KB890469_gene614	2.679e-49	184.0	28HI5@1|root,2Z7TP@2|Bacteria,4NET5@976|Bacteroidetes,1IQED@117747|Sphingobacteriia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	Spond_N
BYD3_k127_1354791_3	1380355.JNIJ01000045_gene5490	3.504e-18	85.0	2E328@1|root,32Y2G@2|Bacteria,1N9RI@1224|Proteobacteria,2UFJ4@28211|Alphaproteobacteria,3K0VA@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_1354791_2	498211.CJA_3229	1.384e-36	144.0	2E3B5@1|root,32YAP@2|Bacteria,1N7KQ@1224|Proteobacteria,1SF5B@1236|Gammaproteobacteria,1FH89@10|Cellvibrio	1236|Gammaproteobacteria	S	Protein of unknown function (DUF2721)	-	-	-	-	-	-	-	-	-	-	-	-	DUF2721
BYD3_k127_1354791_0	1353531.AZNX01000002_gene4741	4.162e-127	413.0	COG0596@1|root,COG0596@2|Bacteria,1N3G3@1224|Proteobacteria,2U1NS@28211|Alphaproteobacteria,4BAH3@82115|Rhizobiaceae	28211|Alphaproteobacteria	S	Serine aminopeptidase, S33	-	-	-	-	-	-	-	-	-	-	-	-	Abhydrolase_1,Abhydrolase_6
BYD3_k127_1354791_4	412597.AEPN01000019_gene1076	0.0005016	42.0	COG3832@1|root,COG3832@2|Bacteria,1RCZK@1224|Proteobacteria,2TV1V@28211|Alphaproteobacteria,2PWR0@265|Paracoccus	28211|Alphaproteobacteria	S	Activator of Hsp90 ATPase homolog 1-like protein	MA20_15105	-	-	-	-	-	-	-	-	-	-	-	AHSA1
BYD3_k127_1369990_0	946077.W5A_11801	1.268e-88	299.0	COG0730@1|root,COG0730@2|Bacteria,4NH6M@976|Bacteroidetes,1HX1K@117743|Flavobacteriia	976|Bacteroidetes	S	membrane transporter protein	-	-	-	ko:K07090	-	-	-	-	ko00000	-	-	-	TauE
BYD3_k127_1369990_1	880074.BARVI_01775	1.083e-10	74.0	COG2982@1|root,COG2982@2|Bacteria,4NEJQ@976|Bacteroidetes,2FN9V@200643|Bacteroidia,22WTT@171551|Porphyromonadaceae	976|Bacteroidetes	M	AsmA-like C-terminal region	-	-	-	ko:K07289	-	-	-	-	ko00000	-	-	-	AsmA,AsmA_2
BYD3_k127_1385453_10	1122179.KB890491_gene4470	1.184e-34	143.0	28M5H@1|root,2ZAJ9@2|Bacteria	2|Bacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_1385453_3	760192.Halhy_4227	7.163e-80	278.0	COG1785@1|root,COG1785@2|Bacteria,4NG3D@976|Bacteroidetes,1IPXF@117747|Sphingobacteriia	976|Bacteroidetes	P	Belongs to the alkaline phosphatase family	-	-	3.1.3.1	ko:K01077	ko00730,ko00790,ko01100,ko02020,map00730,map00790,map01100,map02020	M00126	R02135,R04620	RC00017	ko00000,ko00001,ko00002,ko00537,ko01000,ko04147	-	-	-	Alk_phosphatase
BYD3_k127_1385453_16	391587.KAOT1_17188	7.694e-12	72.0	2E78C@1|root,331S1@2|Bacteria,4NPWT@976|Bacteroidetes,1I2MW@117743|Flavobacteriia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_1385453_6	391596.PBAL39_20575	2.043e-48	192.0	COG5295@1|root,COG5295@2|Bacteria,4NF3S@976|Bacteroidetes,1ISQ8@117747|Sphingobacteriia	976|Bacteroidetes	UW	domain, Protein	-	-	-	-	-	-	-	-	-	-	-	-	Collagen,Peptidase_S74
BYD3_k127_1385453_4	1349822.NSB1T_04240	3.606e-74	263.0	2BWJ3@1|root,2Z8E8@2|Bacteria,4NI7Z@976|Bacteroidetes,2FNX1@200643|Bacteroidia,22X7I@171551|Porphyromonadaceae	976|Bacteroidetes	S	Sulfotransferase family	-	-	-	-	-	-	-	-	-	-	-	-	Sulfotransfer_3
BYD3_k127_1385453_14	641524.ADICYQ_3985	9.703e-24	103.0	COG0607@1|root,COG0607@2|Bacteria,4NSD1@976|Bacteroidetes,47SAY@768503|Cytophagia	976|Bacteroidetes	P	PFAM Rhodanese-like domain	-	-	-	-	-	-	-	-	-	-	-	-	Rhodanese
BYD3_k127_1385453_11	1086011.HJ01_00039	3.531e-34	134.0	COG0607@1|root,COG0607@2|Bacteria,4NSD1@976|Bacteroidetes,1I4FW@117743|Flavobacteriia,2NX6I@237|Flavobacterium	976|Bacteroidetes	P	Rhodanese Homology Domain	-	-	-	-	-	-	-	-	-	-	-	-	Rhodanese
BYD3_k127_1385453_9	1048983.EL17_15305	2.141e-36	140.0	COG3118@1|root,COG3118@2|Bacteria,4NS6N@976|Bacteroidetes,47R18@768503|Cytophagia	976|Bacteroidetes	O	Belongs to the thioredoxin family	-	-	-	ko:K03671	ko04621,ko05418,map04621,map05418	-	-	-	ko00000,ko00001,ko03110	-	-	-	Thioredoxin
BYD3_k127_1385453_12	929562.Emtol_0583	4.543e-31	126.0	COG0526@1|root,COG0607@1|root,COG0526@2|Bacteria,COG0607@2|Bacteria,4NUPH@976|Bacteroidetes,47PJB@768503|Cytophagia	976|Bacteroidetes	OP	COGs COG0607 Rhodanese-related sulfurtransferase	glpE	-	-	-	-	-	-	-	-	-	-	-	Rhodanese,Thioredoxin
BYD3_k127_1385453_2	755732.Fluta_3018	1.745e-83	281.0	COG0664@1|root,COG0664@2|Bacteria,4NFIS@976|Bacteroidetes,1HXJ2@117743|Flavobacteriia,2PBNT@246874|Cryomorphaceae	976|Bacteroidetes	K	COGs COG0664 cAMP-binding protein - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase	-	-	-	ko:K01420	-	-	-	-	ko00000,ko03000	-	-	-	HTH_Crp_2,cNMP_binding
BYD3_k127_1385453_17	643867.Ftrac_2337	4.487e-11	66.0	2DI4K@1|root,3020V@2|Bacteria,4NV1J@976|Bacteroidetes,47S4A@768503|Cytophagia	976|Bacteroidetes	S	Protein of unknown function (DUF2892)	-	-	-	-	-	-	-	-	-	-	-	-	DUF2892
BYD3_k127_1385453_18	1121373.KB903625_gene3210	6.251e-10	62.0	COG0607@1|root,COG0607@2|Bacteria	2|Bacteria	P	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS	-	-	-	-	-	-	-	-	-	-	-	-	Rhodanese
BYD3_k127_1385453_20	641526.ADIWIN_2615	0.0001533	51.0	COG3291@1|root,COG3325@1|root,COG3291@2|Bacteria,COG3325@2|Bacteria,4PKTY@976|Bacteroidetes,1IJEU@117743|Flavobacteriia	976|Bacteroidetes	O	ASPIC and UnbV	-	-	-	-	-	-	-	-	-	-	-	-	FG-GAP,MAM,UnbV_ASPIC,VCBS,fn3
BYD3_k127_1385453_7	391596.PBAL39_20575	1.002e-45	182.0	COG5295@1|root,COG5295@2|Bacteria,4NF3S@976|Bacteroidetes,1ISQ8@117747|Sphingobacteriia	976|Bacteroidetes	UW	domain, Protein	-	-	-	-	-	-	-	-	-	-	-	-	Collagen,Peptidase_S74
BYD3_k127_1385453_21	1237149.C900_01790	0.0003421	53.0	COG0729@1|root,COG2911@1|root,COG0729@2|Bacteria,COG2911@2|Bacteria	2|Bacteria	S	protein secretion	-	-	-	-	-	-	-	-	-	-	-	-	Bac_surface_Ag,Haemagg_act,Peptidase_S74
BYD3_k127_1385453_1	1313421.JHBV01000007_gene4252	1.332e-86	310.0	COG1283@1|root,COG1283@2|Bacteria,4NHMY@976|Bacteroidetes,1IWAS@117747|Sphingobacteriia	976|Bacteroidetes	P	Na+/Pi-cotransporter	-	-	-	ko:K03324	-	-	-	-	ko00000,ko02000	2.A.58.2	-	-	Na_Pi_cotrans,PhoU
BYD3_k127_1385453_0	760192.Halhy_5692	5.87e-259	809.0	COG0504@1|root,COG0504@2|Bacteria,4NEWT@976|Bacteroidetes,1IP4J@117747|Sphingobacteriia	976|Bacteroidetes	F	Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates	pyrG	-	6.3.4.2	ko:K01937	ko00240,ko01100,map00240,map01100	M00052	R00571,R00573	RC00010,RC00074	ko00000,ko00001,ko00002,ko01000	-	-	-	CTP_synth_N,GATase
BYD3_k127_1385453_5	1121904.ARBP01000012_gene1350	2.933e-72	248.0	COG4445@1|root,COG4445@2|Bacteria,4NP3S@976|Bacteroidetes,47Q34@768503|Cytophagia	976|Bacteroidetes	FJ	tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE)	-	-	-	ko:K06169	-	-	-	-	ko00000,ko01000,ko03016	-	-	-	MiaE
BYD3_k127_1385453_13	1122176.KB903587_gene4480	1.648e-29	127.0	COG1266@1|root,COG1266@2|Bacteria,4NIKQ@976|Bacteroidetes	976|Bacteroidetes	S	CAAX protease self-immunity	-	-	-	ko:K07052	-	-	-	-	ko00000	-	-	-	Abi
BYD3_k127_1385453_8	1122179.KB890436_gene1333	3.071e-42	157.0	COG0507@1|root,COG0507@2|Bacteria,4P0TS@976|Bacteroidetes,1J07W@117747|Sphingobacteriia	976|Bacteroidetes	L	COG0507 ATP-dependent exoDNAse (exonuclease V) alpha subunit - helicase superfamily I member	-	-	-	-	-	-	-	-	-	-	-	-	Herpes_Helicase,PIF1
BYD3_k127_1394223_0	700598.Niako_6538	3.68e-289	894.0	COG1217@1|root,COG1217@2|Bacteria,4NDVM@976|Bacteroidetes,1IQXV@117747|Sphingobacteriia	976|Bacteroidetes	T	GTP-binding protein TypA	typA	-	-	ko:K06207	-	-	-	-	ko00000	-	-	-	EFG_C,GTP_EFTU,GTP_EFTU_D2
BYD3_k127_141470_5	991.IW20_14400	9.136e-22	102.0	298D5@1|root,332DE@2|Bacteria,4NV39@976|Bacteroidetes,1I5NP@117743|Flavobacteriia	976|Bacteroidetes	S	Protein of unknown function (DUF3667)	-	-	-	-	-	-	-	-	-	-	-	-	DUF3667
BYD3_k127_141470_1	1237149.C900_05299	2.547e-65	230.0	COG1073@1|root,COG1073@2|Bacteria,4NP3H@976|Bacteroidetes	976|Bacteroidetes	S	Alpha/beta hydrolase family	-	-	-	-	-	-	-	-	-	-	-	-	Abhydrolase_1,Hydrolase_4
BYD3_k127_141470_0	1121887.AUDK01000037_gene804	1.414e-74	260.0	COG3264@1|root,COG3264@2|Bacteria,4NEAM@976|Bacteroidetes,1HYUA@117743|Flavobacteriia,2NVKP@237|Flavobacterium	976|Bacteroidetes	M	Mechanosensitive ion channel	-	-	-	ko:K05802	-	-	-	-	ko00000,ko02000	1.A.23.1.1	-	-	MS_channel
BYD3_k127_141470_3	1453505.JASY01000002_gene2276	6.862e-46	171.0	COG0454@1|root,COG0456@2|Bacteria,4NSPT@976|Bacteroidetes,1I4MD@117743|Flavobacteriia,2NWJI@237|Flavobacterium	976|Bacteroidetes	K	acetyltransferase	-	-	-	-	-	-	-	-	-	-	-	-	Acetyltransf_7
BYD3_k127_141470_6	504472.Slin_6145	1.475e-20	94.0	COG2824@1|root,COG2824@2|Bacteria,4NEFZ@976|Bacteroidetes,47S53@768503|Cytophagia	976|Bacteroidetes	P	PhnA domain	phnA	-	-	ko:K06193	ko01120,map01120	-	-	-	ko00000	-	-	-	PhnA,PhnA_Zn_Ribbon
BYD3_k127_141470_4	1120966.AUBU01000001_gene900	2.823e-33	133.0	COG0782@1|root,COG0782@2|Bacteria,4NQVP@976|Bacteroidetes	976|Bacteroidetes	K	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus	-	-	-	-	-	-	-	-	-	-	-	-	GreA_GreB
BYD3_k127_141470_2	269798.CHU_3783	4.948e-55	198.0	COG3832@1|root,COG3832@2|Bacteria,4NSGE@976|Bacteroidetes,47VIT@768503|Cytophagia	976|Bacteroidetes	S	Activator of Hsp90 ATPase homolog 1-like protein	-	-	-	-	-	-	-	-	-	-	-	-	AHSA1
BYD3_k127_1416130_0	1122176.KB903587_gene4486	1.135e-49	187.0	COG3291@1|root,COG3291@2|Bacteria,4NDZQ@976|Bacteroidetes	976|Bacteroidetes	H	Gliding motility-associated C-terminal domain	-	-	-	-	-	-	-	-	-	-	-	-	CHU_C
BYD3_k127_1416130_1	1410613.JNKF01000011_gene1212	1.876e-15	90.0	COG1092@1|root,COG1092@2|Bacteria,4NG9S@976|Bacteroidetes,2FN8H@200643|Bacteroidia	976|Bacteroidetes	J	SAM-dependent methyltransferase	rlmI	-	2.1.1.191	ko:K06969	-	-	-	-	ko00000,ko01000,ko03009	-	-	-	Methyltrans_SAM
BYD3_k127_1416130_2	1288826.MSNKSG1_00321	1.106e-09	62.0	COG2151@1|root,COG3677@1|root,COG2151@2|Bacteria,COG3677@2|Bacteria,1RF3S@1224|Proteobacteria,1S4FY@1236|Gammaproteobacteria,46ARE@72275|Alteromonadaceae	1236|Gammaproteobacteria	L	metal-sulfur cluster biosynthetic enzyme	paaD	GO:0006082,GO:0006725,GO:0006805,GO:0008150,GO:0008152,GO:0009056,GO:0009404,GO:0009407,GO:0009410,GO:0009636,GO:0009850,GO:0009852,GO:0009987,GO:0010124,GO:0010817,GO:0016054,GO:0019439,GO:0019748,GO:0019752,GO:0032787,GO:0042178,GO:0042221,GO:0042445,GO:0042447,GO:0042537,GO:0043436,GO:0044237,GO:0044248,GO:0044281,GO:0044282,GO:0046395,GO:0050896,GO:0051716,GO:0065007,GO:0065008,GO:0070887,GO:0071466,GO:0071704,GO:0072329,GO:0098754,GO:1901360,GO:1901361,GO:1901575	-	ko:K02612	ko00360,ko01120,map00360,map01120	-	R09838	RC02690	ko00000,ko00001	-	-	iECSE_1348.ECSE_1476	FeS_assembly_P
BYD3_k127_1436579_2	504487.JCM19302_3557	1.985e-23	103.0	COG0560@1|root,COG0560@2|Bacteria,4NIF2@976|Bacteroidetes,1HZ6P@117743|Flavobacteriia	976|Bacteroidetes	E	haloacid dehalogenase-like hydrolase	-	-	-	-	-	-	-	-	-	-	-	-	HAD
BYD3_k127_1436579_1	1120966.AUBU01000002_gene2241	8.967e-47	176.0	2DICZ@1|root,32UAY@2|Bacteria,4NU7D@976|Bacteroidetes,47SYM@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_1436579_0	1313421.JHBV01000030_gene2189	1.871e-60	216.0	COG0727@1|root,COG0727@2|Bacteria,4NEPX@976|Bacteroidetes,1IQ2V@117747|Sphingobacteriia	976|Bacteroidetes	S	Protein of unknown function (DUF3109)	-	-	-	-	-	-	-	-	-	-	-	-	DUF3109
BYD3_k127_1436579_3	742725.HMPREF9450_01896	1.173e-09	66.0	COG3187@1|root,COG3187@2|Bacteria,4NXH7@976|Bacteroidetes,2G1GF@200643|Bacteroidia,22UKR@171550|Rikenellaceae	976|Bacteroidetes	O	META domain	-	-	-	-	-	-	-	-	-	-	-	-	META
BYD3_k127_1439272_0	760192.Halhy_3096	1.978e-88	314.0	COG0457@1|root,COG0457@2|Bacteria,4NMZG@976|Bacteroidetes,1IZUU@117747|Sphingobacteriia	976|Bacteroidetes	S	Tetratricopeptide repeat	-	-	-	-	-	-	-	-	-	-	-	-	DUF1736,PMT_2,TPR_16,TPR_2,TPR_8
BYD3_k127_1448228_0	1122176.KB903598_gene4588	2.667e-151	493.0	COG1108@1|root,COG1108@2|Bacteria,4NH3D@976|Bacteroidetes,1IXC3@117747|Sphingobacteriia	976|Bacteroidetes	P	ABC 3 transport family	mntD	-	-	ko:K11708,ko:K11709	ko02010,map02010	M00319	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.15	-	-	ABC-3
BYD3_k127_1448228_1	760192.Halhy_3855	1.715e-62	226.0	COG0248@1|root,COG0248@2|Bacteria,4NH03@976|Bacteroidetes,1IQTS@117747|Sphingobacteriia	976|Bacteroidetes	FP	PFAM Ppx GppA phosphatase	ppx	-	3.6.1.11,3.6.1.40	ko:K01524	ko00230,map00230	-	R03409	RC00002	ko00000,ko00001,ko01000	-	-	-	HD,Ppx-GppA
BYD3_k127_1448228_3	1122176.KB903534_gene2145	4.531e-14	80.0	COG3637@1|root,COG3637@2|Bacteria,4NYY3@976|Bacteroidetes	976|Bacteroidetes	M	Outer membrane protein beta-barrel domain	-	-	-	-	-	-	-	-	-	-	-	-	OMP_b-brl,OMP_b-brl_2
BYD3_k127_1448228_4	1124780.ANNU01000045_gene2317	6.864e-08	53.0	2E4YQ@1|root,32ZSH@2|Bacteria,4NVKX@976|Bacteroidetes,47RX3@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_1457_2	1122179.KB890460_gene2152	7.02e-75	255.0	COG0323@1|root,COG0323@2|Bacteria,4NDWJ@976|Bacteroidetes,1IPN2@117747|Sphingobacteriia	976|Bacteroidetes	L	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex	mutL	GO:0003674,GO:0003676,GO:0003677,GO:0003697,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0032300,GO:0032991,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1990391	-	ko:K03572	ko03430,map03430	-	-	-	ko00000,ko00001,ko03400	-	-	-	DNA_mis_repair,HATPase_c_3,MutL_C
BYD3_k127_1457_0	760192.Halhy_2662	1.249e-286	892.0	COG0034@1|root,COG0034@2|Bacteria,4NFSM@976|Bacteroidetes,1INR4@117747|Sphingobacteriia	976|Bacteroidetes	F	Amidophosphoribosyltransferase	purF	-	2.4.2.14	ko:K00764	ko00230,ko00250,ko01100,ko01110,ko01130,map00230,map00250,map01100,map01110,map01130	M00048	R01072	RC00010,RC02724,RC02752	ko00000,ko00001,ko00002,ko01000,ko01002	-	-	-	GATase_7
BYD3_k127_1457_1	1313421.JHBV01000022_gene4690	1.223e-176	562.0	COG5505@1|root,COG5505@2|Bacteria,4NE2H@976|Bacteroidetes,1IPAU@117747|Sphingobacteriia	976|Bacteroidetes	S	Protein of unknown function (DUF819)	-	-	-	-	-	-	-	-	-	-	-	-	DUF819
BYD3_k127_1462862_0	760192.Halhy_3337	5.857e-250	780.0	COG0539@1|root,COG0539@2|Bacteria,4NDW9@976|Bacteroidetes,1INSH@117747|Sphingobacteriia	976|Bacteroidetes	J	Ribosomal protein S1	rpsA	-	-	ko:K02945	ko03010,map03010	M00178	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	S1
BYD3_k127_1462862_1	1122176.KB903546_gene988	5.512e-189	599.0	COG0318@1|root,COG0318@2|Bacteria,4NFPF@976|Bacteroidetes	976|Bacteroidetes	IQ	Acyl-CoA synthetase (AMP-forming) AMP-acid ligase II	fadD	-	6.2.1.3	ko:K01897	ko00061,ko00071,ko01100,ko01212,ko02024,ko03320,ko04146,ko04216,ko04714,ko04920,map00061,map00071,map01100,map01212,map02024,map03320,map04146,map04216,map04714,map04920	M00086	R01280	RC00004,RC00014	ko00000,ko00001,ko00002,ko01000,ko01004,ko04147	4.C.1.1	-	-	AMP-binding,AMP-binding_C
BYD3_k127_1495641_0	471854.Dfer_1503	2.714e-131	455.0	COG1956@1|root,COG2972@1|root,COG3292@1|root,COG1956@2|Bacteria,COG2972@2|Bacteria,COG3292@2|Bacteria,4NHMQ@976|Bacteroidetes,47P3A@768503|Cytophagia	976|Bacteroidetes	T	Histidine kinase	-	-	-	-	-	-	-	-	-	-	-	-	GAF_2,His_kinase,Reg_prop,Y_Y_Y
BYD3_k127_1495641_1	471854.Dfer_1279	1.141e-87	293.0	COG3279@1|root,COG3279@2|Bacteria,4NFPV@976|Bacteroidetes,47PTI@768503|Cytophagia	976|Bacteroidetes	T	Response regulator of the LytR AlgR family	-	-	-	ko:K02477	-	-	-	-	ko00000,ko02022	-	-	-	LytTR,Response_reg
BYD3_k127_1512817_3	1122176.KB903576_gene5032	6.683e-80	289.0	COG2319@1|root,COG4995@1|root,COG2319@2|Bacteria,COG4995@2|Bacteria,4P49H@976|Bacteroidetes	976|Bacteroidetes	H	WD40 repeats	-	-	-	-	-	-	-	-	-	-	-	-	CHAT
BYD3_k127_1512817_7	1122179.KB890413_gene4875	4.56e-08	61.0	COG0135@1|root,COG0135@2|Bacteria	2|Bacteria	E	phosphoribosylanthranilate isomerase activity	trpF	-	5.3.1.24	ko:K01817	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	M00023	R03509	RC00945	ko00000,ko00001,ko00002,ko01000	-	-	-	PRAI
BYD3_k127_1512817_5	945713.IALB_2313	1.772e-47	193.0	COG3420@1|root,COG4447@1|root,COG3420@2|Bacteria,COG4447@2|Bacteria	2|Bacteria	S	cellulose binding	quiC	-	4.2.1.118	ko:K09483	ko00400,ko01110,ko01130,map00400,map01110,map01130	-	R01627	RC00568	ko00000,ko00001,ko01000	-	-	-	Beta_helix,NosD,PSII_BNR
BYD3_k127_1512817_6	357808.RoseRS_2802	1.026e-35	151.0	COG1520@1|root,COG1520@2|Bacteria,2G9GE@200795|Chloroflexi,3774I@32061|Chloroflexia	32061|Chloroflexia	S	amine dehydrogenase activity	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_1512817_8	558152.IQ37_19560	0.0004307	52.0	COG2234@1|root,COG2234@2|Bacteria,4NJCD@976|Bacteroidetes,1HZ5Q@117743|Flavobacteriia,3ZPW2@59732|Chryseobacterium	976|Bacteroidetes	S	Leucyl aminopeptidase	-	-	3.4.11.10,3.4.11.6	ko:K19701	-	-	-	-	ko00000,ko01000,ko01002	-	-	-	Peptidase_M28
BYD3_k127_1512817_4	485918.Cpin_0418	4.649e-77	263.0	COG0491@1|root,COG0491@2|Bacteria,4NE2Y@976|Bacteroidetes,1J079@117747|Sphingobacteriia	976|Bacteroidetes	P	beta-lactamase domain protein	-	-	-	-	-	-	-	-	-	-	-	-	Lactamase_B
BYD3_k127_1512817_0	1356852.N008_16255	4.007e-258	810.0	COG1164@1|root,COG1164@2|Bacteria,4NJFW@976|Bacteroidetes,47TFT@768503|Cytophagia	976|Bacteroidetes	E	Angiotensin-converting enzyme	-	-	3.4.15.1	ko:K01283	ko04614,ko04924,ko05142,ko05410,map04614,map04924,map05142,map05410	-	-	-	ko00000,ko00001,ko01000,ko01002,ko04090,ko04147	-	-	-	Peptidase_M2
BYD3_k127_1512817_2	760192.Halhy_4520	8.871e-193	614.0	COG1473@1|root,COG1473@2|Bacteria,4NEKH@976|Bacteroidetes,1IRNW@117747|Sphingobacteriia	976|Bacteroidetes	S	Peptidase dimerisation domain	-	-	-	ko:K12941	-	-	-	-	ko00000,ko01002	-	-	-	M20_dimer,Peptidase_M20
BYD3_k127_1512817_1	1122176.KB903534_gene2127	2.659e-245	791.0	COG0823@1|root,COG2831@1|root,COG0823@2|Bacteria,COG2831@2|Bacteria,4PNV1@976|Bacteroidetes,1IV8M@117747|Sphingobacteriia	976|Bacteroidetes	U	hemolysin activation secretion protein	-	-	-	-	-	-	-	-	-	-	-	-	PD40
BYD3_k127_1514684_1	1122176.KB903573_gene4833	2.067e-278	865.0	COG0187@1|root,COG0187@2|Bacteria,4NF18@976|Bacteroidetes,1IQV0@117747|Sphingobacteriia	976|Bacteroidetes	L	Type IIA topoisomerase (DNA gyrase topo II topoisomerase IV) B subunit	parE	-	-	ko:K02622	-	-	-	-	ko00000,ko01000,ko02048,ko03032,ko03036	-	-	-	DNA_gyraseB,DNA_gyraseB_C,HATPase_c,Toprim
BYD3_k127_1514684_0	1122176.KB903543_gene659	0.0	1050.0	COG0466@1|root,COG0466@2|Bacteria,4NE1G@976|Bacteroidetes,1IQDQ@117747|Sphingobacteriia	976|Bacteroidetes	O	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner	lon	-	3.4.21.53	ko:K01338	ko04112,map04112	-	-	-	ko00000,ko00001,ko01000,ko01002	-	-	-	AAA,LON_substr_bdg,Lon_C
BYD3_k127_1514684_4	1122176.KB903543_gene661	1.168e-50	190.0	COG1629@1|root,COG4771@2|Bacteria,4PN7E@976|Bacteroidetes,1J0MG@117747|Sphingobacteriia	976|Bacteroidetes	P	CarboxypepD_reg-like domain	-	-	-	-	-	-	-	-	-	-	-	-	CarbopepD_reg_2
BYD3_k127_1514684_2	1121912.AUHD01000005_gene1843	2.671e-115	383.0	COG0729@1|root,COG0729@2|Bacteria,4PPA8@976|Bacteroidetes	976|Bacteroidetes	M	Surface antigen	-	-	-	-	-	-	-	-	-	-	-	-	Bac_surface_Ag
BYD3_k127_1514684_5	391603.FBALC1_16597	2.355e-15	83.0	COG2885@1|root,COG2885@2|Bacteria,4NKCW@976|Bacteroidetes,1HXSH@117743|Flavobacteriia	976|Bacteroidetes	M	PFAM Outer membrane protein, OmpA MotB, C-terminal	-	-	-	-	-	-	-	-	-	-	-	-	OmpA
BYD3_k127_1514684_3	313606.M23134_00148	2.075e-85	311.0	COG3291@1|root,COG3386@1|root,COG3291@2|Bacteria,COG3386@2|Bacteria,4NDZQ@976|Bacteroidetes,47MGN@768503|Cytophagia	976|Bacteroidetes	M	C-terminal domain of CHU protein family	-	-	-	-	-	-	-	-	-	-	-	-	CHU_C,PKD
BYD3_k127_1516220_1	929713.NIASO_15330	5.334e-175	554.0	COG0554@1|root,COG0554@2|Bacteria,4NFUH@976|Bacteroidetes,1IP31@117747|Sphingobacteriia	976|Bacteroidetes	C	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate	glpK	GO:0003674,GO:0003824,GO:0004370,GO:0005975,GO:0006066,GO:0006071,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019400,GO:0019751,GO:0044237,GO:0044238,GO:0044262,GO:0044281,GO:0071704,GO:1901615	2.7.1.30	ko:K00864	ko00561,ko01100,ko03320,ko04626,map00561,map01100,map03320,map04626	-	R00847	RC00002,RC00017	ko00000,ko00001,ko01000,ko04147	-	-	-	FGGY_C,FGGY_N
BYD3_k127_1516220_0	929556.Solca_0722	3.818e-202	641.0	COG0578@1|root,COG0578@2|Bacteria,4NEYG@976|Bacteroidetes,1INV4@117747|Sphingobacteriia	976|Bacteroidetes	C	PFAM FAD dependent oxidoreductase	glpA	-	1.1.5.3	ko:K00111	ko00564,ko01110,map00564,map01110	-	R00848	RC00029	ko00000,ko00001,ko01000	-	-	-	DAO,DAO_C
BYD3_k127_1516220_2	1041826.FCOL_00405	1.777e-67	235.0	COG0580@1|root,COG0580@2|Bacteria,4NEFK@976|Bacteroidetes,1HYTU@117743|Flavobacteriia,2P04E@237|Flavobacterium	976|Bacteroidetes	G	Major intrinsic protein	glpF	-	-	ko:K02440	-	-	-	-	ko00000,ko02000	1.A.8.1,1.A.8.2	-	-	MIP
BYD3_k127_151766_1	1313421.JHBV01000041_gene3707	1.084e-66	243.0	COG2866@1|root,COG4412@1|root,COG2866@2|Bacteria,COG4412@2|Bacteria	2|Bacteria	S	peptidase activity, acting on L-amino acid peptides	cpt	-	3.4.17.18	ko:K05996	-	-	-	-	ko00000,ko01000,ko01002	-	-	-	Peptidase_M14,Peptidase_M6
BYD3_k127_151766_0	1313421.JHBV01000041_gene3707	5.378e-82	285.0	COG2866@1|root,COG4412@1|root,COG2866@2|Bacteria,COG4412@2|Bacteria	2|Bacteria	S	peptidase activity, acting on L-amino acid peptides	cpt	-	3.4.17.18	ko:K05996	-	-	-	-	ko00000,ko01000,ko01002	-	-	-	Peptidase_M14,Peptidase_M6
BYD3_k127_151766_2	1348583.ATLH01000010_gene3257	2.301e-07	59.0	COG1629@1|root,COG1629@2|Bacteria,4PKVH@976|Bacteroidetes,1IJNJ@117743|Flavobacteriia	976|Bacteroidetes	P	TonB-dependent receptor	-	-	-	-	-	-	-	-	-	-	-	-	CarbopepD_reg_2,STN
BYD3_k127_1532653_1	1122176.KB903546_gene986	1.679e-98	326.0	COG1363@1|root,COG1363@2|Bacteria,4NIW2@976|Bacteroidetes,1J085@117747|Sphingobacteriia	976|Bacteroidetes	G	M42 glutamyl aminopeptidase	-	-	-	-	-	-	-	-	-	-	-	-	Peptidase_M42
BYD3_k127_1532653_3	743722.Sph21_2825	3.399e-26	110.0	COG2154@1|root,COG2154@2|Bacteria,4NS9U@976|Bacteroidetes,1ITUM@117747|Sphingobacteriia	976|Bacteroidetes	H	PFAM Pterin 4 alpha carbinolamine dehydratase	phhB	-	4.2.1.96	ko:K01724	ko00790,map00790	-	R04734	RC01208	ko00000,ko00001,ko01000,ko04147	-	-	-	Pterin_4a
BYD3_k127_1532653_0	1122179.KB890413_gene4796	1.397e-138	451.0	COG0436@1|root,COG0436@2|Bacteria,4NES3@976|Bacteroidetes,1IP0R@117747|Sphingobacteriia	976|Bacteroidetes	E	PFAM Aminotransferase class I and II	ybdL	-	2.6.1.88	ko:K14287	-	-	R08618	RC00006,RC00025	ko00000,ko01000,ko01007	-	-	-	Aminotran_1_2
BYD3_k127_1532653_2	1249997.JHZW01000002_gene1654	5.974e-62	218.0	COG2010@1|root,COG2010@2|Bacteria,4NSE3@976|Bacteroidetes,1I28K@117743|Flavobacteriia,2PHMW@252356|Maribacter	976|Bacteroidetes	C	Haem-binding domain	-	-	-	-	-	-	-	-	-	-	-	-	Haem_bd
BYD3_k127_153316_2	1159870.KB907784_gene1266	5.054e-42	160.0	COG2940@1|root,COG2940@2|Bacteria,1MWFB@1224|Proteobacteria,2VSZY@28216|Betaproteobacteria,3T3K6@506|Alcaligenaceae	28216|Betaproteobacteria	S	SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain	-	-	-	ko:K07117	-	-	-	-	ko00000	-	-	-	SET
BYD3_k127_153316_0	1122176.KB903550_gene4288	9.309e-116	380.0	28J46@1|root,2Z906@2|Bacteria,4NFYM@976|Bacteroidetes	976|Bacteroidetes	S	Protein of unknown function (DUF3078)	-	-	-	-	-	-	-	-	-	-	-	-	DUF3078
BYD3_k127_153316_1	518766.Rmar_1480	5.883e-98	336.0	COG3867@1|root,COG3867@2|Bacteria,4NI3G@976|Bacteroidetes	976|Bacteroidetes	G	arabinogalactan	-	-	3.2.1.89	ko:K01224	-	-	-	-	ko00000,ko01000	-	-	-	Glyco_hydro_53
BYD3_k127_1557652_0	153721.MYP_3495	8.902e-122	403.0	COG3876@1|root,COG3876@2|Bacteria,4NEXD@976|Bacteroidetes,47KTI@768503|Cytophagia	976|Bacteroidetes	S	PFAM Uncharacterised conserved protein UCP016719	-	-	-	-	-	-	-	-	-	-	-	-	DUF1343
BYD3_k127_1557652_1	330214.NIDE0583	1.946e-53	192.0	COG2862@1|root,COG2862@2|Bacteria	2|Bacteria	S	Uncharacterized protein family, UPF0114	yqhA	GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944	-	ko:K03535	-	-	-	-	ko00000,ko02000	2.A.1.14.1	-	-	UPF0114
BYD3_k127_1557652_2	1267211.KI669560_gene1242	1.06e-09	62.0	COG1073@1|root,COG1073@2|Bacteria,4PN7H@976|Bacteroidetes,1J0MK@117747|Sphingobacteriia	976|Bacteroidetes	S	Alpha/beta hydrolase family	-	-	-	-	-	-	-	-	-	-	-	-	Abhydrolase_6
BYD3_k127_1558565_1	1121904.ARBP01000033_gene3192	1.641e-65	231.0	COG0564@1|root,COG0564@2|Bacteria,4NFS8@976|Bacteroidetes,47KV5@768503|Cytophagia	976|Bacteroidetes	J	Pseudouridine synthase	rluC	-	5.4.99.23,5.4.99.28,5.4.99.29	ko:K06177,ko:K06180	-	-	-	-	ko00000,ko01000,ko03009,ko03016	-	-	-	PseudoU_synth_2
BYD3_k127_1558565_3	760192.Halhy_0294	4.788e-42	156.0	COG0176@1|root,COG0176@2|Bacteria,4NFVZ@976|Bacteroidetes,1IP8P@117747|Sphingobacteriia	976|Bacteroidetes	G	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway	tal	-	2.2.1.2	ko:K00616,ko:K08314	ko00030,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map01100,map01110,map01120,map01130,map01200,map01230	M00004,M00007	R01827	RC00439,RC00604	ko00000,ko00001,ko00002,ko01000	-	-	-	TAL_FSA
BYD3_k127_1558565_2	760192.Halhy_0294	5.721e-63	217.0	COG0176@1|root,COG0176@2|Bacteria,4NFVZ@976|Bacteroidetes,1IP8P@117747|Sphingobacteriia	976|Bacteroidetes	G	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway	tal	-	2.2.1.2	ko:K00616,ko:K08314	ko00030,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map01100,map01110,map01120,map01130,map01200,map01230	M00004,M00007	R01827	RC00439,RC00604	ko00000,ko00001,ko00002,ko01000	-	-	-	TAL_FSA
BYD3_k127_1558565_0	760192.Halhy_6054	2.276e-74	267.0	COG1807@1|root,COG1807@2|Bacteria,4NEU7@976|Bacteroidetes,1IR4N@117747|Sphingobacteriia	976|Bacteroidetes	M	4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferase of PMT family	-	-	-	-	-	-	-	-	-	-	-	-	PMT_2
BYD3_k127_1559907_2	1122176.KB903548_gene1192	4.824e-38	155.0	COG1470@1|root,COG1470@2|Bacteria,4NFPN@976|Bacteroidetes,1IWMV@117747|Sphingobacteriia	976|Bacteroidetes	S	Carboxypeptidase regulatory-like domain	-	-	-	-	-	-	-	-	-	-	-	-	CarbopepD_reg_2
BYD3_k127_1559907_1	1237149.C900_01015	4.826e-49	184.0	COG1470@1|root,COG1470@2|Bacteria,4NFPN@976|Bacteroidetes,47M4H@768503|Cytophagia	976|Bacteroidetes	S	CarboxypepD_reg-like domain	-	-	-	-	-	-	-	-	-	-	-	-	CarbopepD_reg_2
BYD3_k127_1559907_0	760192.Halhy_4124	2.867e-89	301.0	COG1024@1|root,COG1024@2|Bacteria,4NEH4@976|Bacteroidetes,1IRSU@117747|Sphingobacteriia	976|Bacteroidetes	I	COG1024 Enoyl-CoA hydratase carnithine racemase	-	-	4.2.1.18	ko:K13766	ko00280,ko01100,map00280,map01100	M00036	R02085	RC02416	ko00000,ko00001,ko00002,ko01000	-	-	-	ECH_1
BYD3_k127_157255_3	926561.KB900624_gene2680	5.12e-07	58.0	COG1787@1|root,COG1787@2|Bacteria,1VBYF@1239|Firmicutes,24R49@186801|Clostridia	186801|Clostridia	V	restriction endonuclease	-	-	-	ko:K07448	-	-	-	-	ko00000,ko02048	-	-	-	Ftsk_gamma,Mrr_cat,zf-C4_Topoisom
BYD3_k127_157255_2	1288963.ADIS_3395	2.294e-16	84.0	COG0607@1|root,COG0607@2|Bacteria,4NUPH@976|Bacteroidetes,47RS4@768503|Cytophagia	976|Bacteroidetes	P	Rhodanese Homology Domain	-	-	-	-	-	-	-	-	-	-	-	-	Rhodanese
BYD3_k127_157255_1	1123519.PSJM300_13440	4.118e-20	98.0	COG2867@1|root,COG2867@2|Bacteria,1QE2D@1224|Proteobacteria,1TAEF@1236|Gammaproteobacteria,1Z45Y@136846|Pseudomonas stutzeri group	1236|Gammaproteobacteria	I	START domain	-	-	-	-	-	-	-	-	-	-	-	-	START
BYD3_k127_157255_0	1122176.KB903531_gene2814	1.021e-39	160.0	COG0515@1|root,COG0515@2|Bacteria,4PKQ1@976|Bacteroidetes,1IYIR@117747|Sphingobacteriia	976|Bacteroidetes	KLT	WG containing repeat	-	-	-	-	-	-	-	-	-	-	-	-	WG_beta_rep
BYD3_k127_1594764_2	760192.Halhy_5836	7.235e-56	202.0	COG2207@1|root,COG2207@2|Bacteria,4NEVG@976|Bacteroidetes,1IPBJ@117747|Sphingobacteriia	976|Bacteroidetes	K	AraC type	-	-	-	-	-	-	-	-	-	-	-	-	HTH_18
BYD3_k127_1594764_0	760192.Halhy_5837	0.0	1356.0	COG1629@1|root,COG1629@2|Bacteria,COG4771@2|Bacteria,4NDXS@976|Bacteroidetes,1J0JI@117747|Sphingobacteriia	976|Bacteroidetes	P	TonB dependent receptor	-	-	-	-	-	-	-	-	-	-	-	-	CarbopepD_reg_2,Plug,TonB_dep_Rec
BYD3_k127_1594764_1	760192.Halhy_5838	2.878e-72	251.0	COG3193@1|root,COG3193@2|Bacteria,4PP22@976|Bacteroidetes	976|Bacteroidetes	S	SusD family	-	-	-	ko:K21572	-	-	-	-	ko00000,ko02000	8.A.46.1,8.A.46.3	-	-	SusD-like_3,SusD_RagB
BYD3_k127_1634367_1	1249997.JHZW01000002_gene1704	2.299e-157	503.0	COG0179@1|root,COG0179@2|Bacteria,4NGI0@976|Bacteroidetes,1HXN9@117743|Flavobacteriia,2PH32@252356|Maribacter	976|Bacteroidetes	Q	Fumarylacetoacetase N-terminal	fahA	-	3.7.1.2	ko:K01555	ko00350,ko00643,ko01100,ko01120,map00350,map00643,map01100,map01120	M00044	R01364	RC00326,RC00446	ko00000,ko00001,ko00002,ko01000,ko04147	-	-	-	FAA_hydrolase,FAA_hydrolase_N
BYD3_k127_1634367_0	886377.Murru_1828	1.564e-194	611.0	COG3185@1|root,COG3185@2|Bacteria,4NFI7@976|Bacteroidetes,1HWZ3@117743|Flavobacteriia	976|Bacteroidetes	E	4-hydroxyphenylpyruvate dioxygenase	hppD	-	1.13.11.27	ko:K00457	ko00130,ko00350,ko00360,ko01100,map00130,map00350,map00360,map01100	M00044	R01372,R02521	RC00505,RC00738	ko00000,ko00001,ko00002,ko01000,ko04147	-	-	-	Glyoxalase,Glyoxalase_5
BYD3_k127_1634367_2	1286632.P278_27200	8.652e-87	291.0	COG2128@1|root,COG2128@2|Bacteria,4NEJZ@976|Bacteroidetes,1HXPF@117743|Flavobacteriia	976|Bacteroidetes	S	carboxymuconolactone decarboxylase	-	-	-	-	-	-	-	-	-	-	-	-	CMD
BYD3_k127_1634367_3	1122179.KB890435_gene925	1.193e-48	180.0	COG3770@1|root,COG3770@2|Bacteria,4P2DE@976|Bacteroidetes	976|Bacteroidetes	M	Penicillin-insensitive murein endopeptidase	-	-	-	-	-	-	-	-	-	-	-	-	Peptidase_M74
BYD3_k127_1681668_1	1341181.FLJC2902T_28210	1.794e-65	226.0	COG4319@1|root,COG4319@2|Bacteria,4NRTT@976|Bacteroidetes,1I3HR@117743|Flavobacteriia,2NWDQ@237|Flavobacterium	976|Bacteroidetes	S	ketosteroid isomerase	-	-	-	-	-	-	-	-	-	-	-	-	DUF4440
BYD3_k127_1681668_0	1341181.FLJC2902T_28220	2.755e-104	351.0	COG3266@1|root,COG3266@2|Bacteria,4NMES@976|Bacteroidetes,1HYRQ@117743|Flavobacteriia,2NTDD@237|Flavobacterium	976|Bacteroidetes	A	domain, Protein	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_1681668_2	1239962.C943_03686	2.669e-13	75.0	2ESVF@1|root,33KDU@2|Bacteria,4NZ9D@976|Bacteroidetes,47SQC@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_1686504_0	1122176.KB903553_gene3637	3.826e-103	353.0	COG2197@1|root,COG2197@2|Bacteria,4PNQY@976|Bacteroidetes	976|Bacteroidetes	KT	helix_turn_helix, Lux Regulon	-	-	-	-	-	-	-	-	-	-	-	-	GerE,Y_Y_Y
BYD3_k127_1686504_8	1450525.JATV01000013_gene2937	1.829e-28	120.0	2DRAU@1|root,33B03@2|Bacteria,4NXX1@976|Bacteroidetes,1ID8H@117743|Flavobacteriia,2NXQB@237|Flavobacterium	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_1686504_9	760192.Halhy_5643	1.705e-13	71.0	2EFZF@1|root,339RM@2|Bacteria,4NXMV@976|Bacteroidetes,1IUQI@117747|Sphingobacteriia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	TspO_MBR
BYD3_k127_1686504_3	1086011.HJ01_02214	2.161e-53	198.0	COG2329@1|root,COG2329@2|Bacteria,4PCJP@976|Bacteroidetes,1IN27@117743|Flavobacteriia,2NXCQ@237|Flavobacterium	976|Bacteroidetes	S	Antibiotic biosynthesis monooxygenase	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_1686504_5	1121373.KB903624_gene2433	5.609e-47	171.0	COG0640@1|root,COG0640@2|Bacteria,4NSDX@976|Bacteroidetes,47R1P@768503|Cytophagia	976|Bacteroidetes	K	helix_turn_helix, Arsenical Resistance Operon Repressor	-	-	-	-	-	-	-	-	-	-	-	-	HTH_20,HTH_5
BYD3_k127_1686504_1	1459636.NTE_00447	2.414e-92	313.0	COG3832@1|root,arCOG05261@2157|Archaea	2157|Archaea	H	Activator of Hsp90 ATPase	-	-	-	-	-	-	-	-	-	-	-	-	AHSA1
BYD3_k127_1686504_2	1123248.KB893317_gene4274	1.732e-57	203.0	COG3832@1|root,COG3832@2|Bacteria,4NST9@976|Bacteroidetes,1ISQV@117747|Sphingobacteriia	976|Bacteroidetes	S	PFAM Activator of Hsp90 ATPase	-	-	-	-	-	-	-	-	-	-	-	-	AHSA1
BYD3_k127_1686504_7	504472.Slin_0221	6.309e-30	123.0	COG3187@1|root,COG3187@2|Bacteria,4NEY0@976|Bacteroidetes,47K7R@768503|Cytophagia	976|Bacteroidetes	O	Lipase (class 3)	-	-	-	-	-	-	-	-	-	-	-	-	Lipase_3,META
BYD3_k127_1686504_10	1173028.ANKO01000065_gene5618	2.301e-05	53.0	COG2335@1|root,COG2335@2|Bacteria,1G6R4@1117|Cyanobacteria,1HBIV@1150|Oscillatoriales	1117|Cyanobacteria	M	Secreted and surface protein containing fasciclin-like repeats	-	-	-	-	-	-	-	-	-	-	-	-	Fasciclin
BYD3_k127_1686504_4	1121382.JQKG01000002_gene4554	2.955e-48	180.0	COG1404@1|root,COG1404@2|Bacteria,1WJR5@1297|Deinococcus-Thermus	1297|Deinococcus-Thermus	O	Peptidase S8 and S53 subtilisin kexin sedolisin	-	-	-	-	-	-	-	-	-	-	-	-	Peptidase_S8
BYD3_k127_1716242_8	992406.RIA_2074	7.558e-28	116.0	COG2759@1|root,COG2759@2|Bacteria,4NG3E@976|Bacteroidetes,1HXR5@117743|Flavobacteriia	976|Bacteroidetes	H	Belongs to the formate--tetrahydrofolate ligase family	fhs	GO:0003674,GO:0003824,GO:0004329,GO:0004477,GO:0004488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006144,GO:0006575,GO:0006725,GO:0006732,GO:0006760,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009112,GO:0009113,GO:0009256,GO:0009257,GO:0009396,GO:0009987,GO:0016053,GO:0016491,GO:0016645,GO:0016646,GO:0016787,GO:0016810,GO:0016814,GO:0016874,GO:0016879,GO:0018130,GO:0019238,GO:0019438,GO:0019752,GO:0034641,GO:0042398,GO:0042440,GO:0042558,GO:0042559,GO:0043436,GO:0043603,GO:0043604,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046112,GO:0046148,GO:0046394,GO:0046483,GO:0046653,GO:0046654,GO:0051186,GO:0051188,GO:0055086,GO:0055114,GO:0071704,GO:0072521,GO:0072522,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576	6.3.4.3	ko:K01938	ko00670,ko00720,ko01100,ko01120,ko01200,map00670,map00720,map01100,map01120,map01200	M00140,M00377	R00943	RC00026,RC00111	ko00000,ko00001,ko00002,ko01000	-	-	-	FTHFS
BYD3_k127_1716242_3	760192.Halhy_2735	5.046e-131	428.0	COG2309@1|root,COG2309@2|Bacteria,4NRU3@976|Bacteroidetes,1IYGI@117747|Sphingobacteriia	976|Bacteroidetes	E	Thermophilic metalloprotease (M29)	-	-	-	ko:K19689	-	-	-	-	ko00000,ko01000,ko01002	-	-	-	Peptidase_M29
BYD3_k127_1716242_2	1122176.KB903542_gene324	4.442e-168	536.0	COG2262@1|root,COG2262@2|Bacteria,4NF0P@976|Bacteroidetes,1IR5V@117747|Sphingobacteriia	976|Bacteroidetes	S	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis	hflX	-	-	ko:K03665	-	-	-	-	ko00000,ko03009	-	-	-	GTP-bdg_M,GTP-bdg_N,MMR_HSR1
BYD3_k127_1716242_6	1121373.KB903620_gene2022	7.246e-56	211.0	COG4942@1|root,COG4942@2|Bacteria,4NH2T@976|Bacteroidetes,47JWJ@768503|Cytophagia	976|Bacteroidetes	D	Peptidase, M23	envC	-	-	-	-	-	-	-	-	-	-	-	Peptidase_M23
BYD3_k127_1716242_9	1408813.AYMG01000025_gene2690	5.362e-12	75.0	COG2834@1|root,COG2834@2|Bacteria,4NFYQ@976|Bacteroidetes,1ISUD@117747|Sphingobacteriia	976|Bacteroidetes	M	Domain of unknown function (DUF4292)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4292
BYD3_k127_1716242_5	926549.KI421517_gene1853	2.477e-60	230.0	COG0457@1|root,COG0457@2|Bacteria,4NDVW@976|Bacteroidetes,47KE1@768503|Cytophagia	976|Bacteroidetes	S	PFAM Tetratricopeptide	-	-	-	-	-	-	-	-	-	-	-	-	TPR_16,TPR_19,TPR_2,TPR_6,TPR_8
BYD3_k127_1716242_0	1122176.KB903548_gene1151	1.169e-204	649.0	COG0469@1|root,COG0469@2|Bacteria,4NEEU@976|Bacteroidetes,1IPRW@117747|Sphingobacteriia	976|Bacteroidetes	G	Belongs to the pyruvate kinase family	pyk	-	2.7.1.40	ko:K00873	ko00010,ko00230,ko00620,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko04930,ko05165,ko05203,ko05230,map00010,map00230,map00620,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map04930,map05165,map05203,map05230	M00001,M00002,M00049,M00050	R00200,R00430,R01138,R01858,R02320	RC00002,RC00015	ko00000,ko00001,ko00002,ko01000,ko04131,ko04147	-	-	-	PK,PK_C
BYD3_k127_1716242_7	1122179.KB890434_gene855	5.019e-32	126.0	COG0236@1|root,COG0236@2|Bacteria,4NS6C@976|Bacteroidetes,1ITA3@117747|Sphingobacteriia	976|Bacteroidetes	IQ	Carrier of the growing fatty acid chain in fatty acid biosynthesis	acpP	GO:0000035,GO:0000036,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0016053,GO:0019637,GO:0019752,GO:0019842,GO:0031177,GO:0032787,GO:0033218,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0044620,GO:0046394,GO:0046467,GO:0046493,GO:0048037,GO:0051192,GO:0071704,GO:0072330,GO:0072341,GO:0090407,GO:0140104,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509	-	ko:K02078	-	-	-	-	ko00000,ko00001	-	-	-	PP-binding
BYD3_k127_1716242_1	641524.ADICYQ_3086	1.365e-177	565.0	COG0304@1|root,COG0304@2|Bacteria,4NEKC@976|Bacteroidetes,47MQI@768503|Cytophagia	976|Bacteroidetes	I	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP	fabF	-	2.3.1.179	ko:K09458	ko00061,ko00780,ko01100,ko01212,map00061,map00780,map01100,map01212	M00083,M00572	R04355,R04726,R04952,R04957,R04960,R04963,R04968,R07762,R10115,R10119	RC00039,RC02728,RC02729,RC02888	ko00000,ko00001,ko00002,ko01000,ko01004	-	-	-	Ketoacyl-synt_C,ketoacyl-synt
BYD3_k127_1716242_4	1122176.KB903548_gene1148	9.636e-91	304.0	COG0571@1|root,COG0571@2|Bacteria,4NE0N@976|Bacteroidetes,1IPYG@117747|Sphingobacteriia	976|Bacteroidetes	K	Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism	rnc	-	3.1.26.3	ko:K03685	ko03008,ko05205,map03008,map05205	-	-	-	ko00000,ko00001,ko01000,ko03009,ko03019,ko03036	-	-	-	Ribonucleas_3_3,dsrm
BYD3_k127_1742333_0	760192.Halhy_2216	9.526e-158	537.0	COG1572@1|root,COG1572@2|Bacteria,4NFAX@976|Bacteroidetes,1IUXA@117747|Sphingobacteriia	976|Bacteroidetes	S	Peptidase family C25	-	-	-	-	-	-	-	-	-	-	-	-	CARDB,FlgD_ig,ILEI,Peptidase_C25
BYD3_k127_1762500_2	1267211.KI669560_gene2455	8.907e-08	55.0	COG1282@1|root,COG1282@2|Bacteria,4NHGZ@976|Bacteroidetes,1IPVT@117747|Sphingobacteriia	976|Bacteroidetes	C	The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane	pntB	-	1.6.1.2	ko:K00325	ko00760,ko01100,map00760,map01100	-	R00112	RC00001	ko00000,ko00001,ko01000	-	-	-	PNTB
BYD3_k127_1762500_1	1123057.P872_19910	2.569e-37	143.0	COG3288@1|root,COG3288@2|Bacteria,4NT78@976|Bacteroidetes,47RF1@768503|Cytophagia	976|Bacteroidetes	C	4TM region of pyridine nucleotide transhydrogenase, mitoch	pntA	-	1.6.1.2	ko:K00324	ko00760,ko01100,map00760,map01100	-	R00112	RC00001	ko00000,ko00001,ko01000	-	-	-	PNTB_4TM
BYD3_k127_1762500_0	1123234.AUKI01000019_gene488	3.482e-222	707.0	COG1506@1|root,COG1506@2|Bacteria,4NHS5@976|Bacteroidetes,1HZ0Y@117743|Flavobacteriia	976|Bacteroidetes	EU	peptidase	-	-	-	-	-	-	-	-	-	-	-	-	FGE-sulfatase,PD40,Peptidase_S9
BYD3_k127_1762500_3	1121904.ARBP01000001_gene5755	0.0001385	46.0	COG4122@1|root,COG4122@2|Bacteria,4NP2A@976|Bacteroidetes,47SZD@768503|Cytophagia	976|Bacteroidetes	S	Macrocin-O-methyltransferase (TylF)	-	-	-	-	-	-	-	-	-	-	-	-	TylF
BYD3_k127_1767582_1	1237149.C900_03255	1.935e-134	441.0	COG0527@1|root,COG0527@2|Bacteria,4NFWR@976|Bacteroidetes,47KM0@768503|Cytophagia	976|Bacteroidetes	E	Belongs to the aspartokinase family	lysC	-	2.7.2.4	ko:K00928	ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01210,map01230	M00016,M00017,M00018,M00033,M00525,M00526,M00527	R00480	RC00002,RC00043	ko00000,ko00001,ko00002,ko01000	-	-	-	AA_kinase
BYD3_k127_1767582_0	755732.Fluta_0844	1.894e-151	500.0	COG4935@1|root,COG4935@2|Bacteria,4NH8G@976|Bacteroidetes,1HYKE@117743|Flavobacteriia,2PBFE@246874|Cryomorphaceae	976|Bacteroidetes	O	CotH kinase protein	cotH	-	-	-	-	-	-	-	-	-	-	-	CHB_HEX_C_1,CotH,LTD,P_proprotein
BYD3_k127_1770046_3	1123234.AUKI01000011_gene1512	3.601e-78	262.0	COG0415@1|root,COG0415@2|Bacteria,4NEDW@976|Bacteroidetes,1HXRR@117743|Flavobacteriia	976|Bacteroidetes	L	Belongs to the DNA photolyase family	phr	-	4.1.99.3	ko:K01669	-	-	-	-	ko00000,ko01000,ko03400	-	-	-	DNA_photolyase,FAD_binding_7
BYD3_k127_1770046_6	765914.ThisiDRAFT_2526	3.387e-54	194.0	COG4276@1|root,COG4276@2|Bacteria,1N2Z3@1224|Proteobacteria,1SRI2@1236|Gammaproteobacteria	1236|Gammaproteobacteria	S	Pfam Polyketide cyclase dehydrase and lipid transport	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_1770046_4	1313421.JHBV01000021_gene4863	9.201e-57	201.0	COG0102@1|root,COG0102@2|Bacteria,4NNGA@976|Bacteroidetes,1IS32@117747|Sphingobacteriia	976|Bacteroidetes	J	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly	rplM	-	-	ko:K02871	ko03010,map03010	M00178,M00179	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_L13
BYD3_k127_1770046_5	760192.Halhy_2729	1.539e-54	193.0	COG0103@1|root,COG0103@2|Bacteria,4NNN1@976|Bacteroidetes,1ISJG@117747|Sphingobacteriia	976|Bacteroidetes	J	Belongs to the universal ribosomal protein uS9 family	rpsI	GO:0000462,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006139,GO:0006364,GO:0006396,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016070,GO:0016072,GO:0019538,GO:0022613,GO:0022626,GO:0022627,GO:0030490,GO:0032991,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0042254,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904	-	ko:K02996	ko03010,map03010	M00178,M00179	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_S9
BYD3_k127_1770046_2	1122176.KB903534_gene2139	1.9e-103	341.0	COG0052@1|root,COG0052@2|Bacteria,4NER0@976|Bacteroidetes,1IQSP@117747|Sphingobacteriia	976|Bacteroidetes	J	Belongs to the universal ribosomal protein uS2 family	rpsB	GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904	-	ko:K02967	ko03010,map03010	M00178,M00179	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_S2
BYD3_k127_1770046_1	760192.Halhy_2731	1.436e-111	367.0	COG0264@1|root,COG0264@2|Bacteria,4NF03@976|Bacteroidetes,1IP5Z@117747|Sphingobacteriia	976|Bacteroidetes	J	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome	tsf	GO:0003674,GO:0003676,GO:0003723,GO:0003746,GO:0005488,GO:0006412,GO:0006414,GO:0006518,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576	-	ko:K02357	-	-	-	-	ko00000,ko03012,ko03029	-	-	-	EF_TS
BYD3_k127_1770046_0	1122176.KB903534_gene2141	2.317e-112	366.0	COG0528@1|root,COG0528@2|Bacteria,4NE8Z@976|Bacteroidetes,1IPN7@117747|Sphingobacteriia	976|Bacteroidetes	F	Catalyzes the reversible phosphorylation of UMP to UDP	pyrH	-	2.7.4.22	ko:K09903	ko00240,ko01100,map00240,map01100	-	R00158	RC00002	ko00000,ko00001,ko01000	-	-	-	AA_kinase
BYD3_k127_1770046_7	1122176.KB903564_gene3181	2.144e-39	151.0	COG3495@1|root,COG3495@2|Bacteria	2|Bacteria	S	Protein of unknown function (DUF3299)	-	-	-	ko:K09950	-	-	-	-	ko00000	-	-	-	DUF3299
BYD3_k127_1770740_2	1313421.JHBV01000013_gene3741	1.662e-47	178.0	2DBBP@1|root,2Z88Z@2|Bacteria	2|Bacteria	S	Sulfo-transferase	-	-	-	-	-	-	-	-	-	-	-	-	Sulfotransfer_3
BYD3_k127_1770740_0	1313421.JHBV01000013_gene3742	7.523e-155	498.0	COG5361@1|root,COG5361@2|Bacteria	2|Bacteria	P	Conserved Protein	-	-	-	-	-	-	-	-	-	-	-	-	DUF1214
BYD3_k127_1770740_1	700598.Niako_6235	7.116e-116	384.0	COG0628@1|root,COG0628@2|Bacteria,4NIB3@976|Bacteroidetes,1IU84@117747|Sphingobacteriia	976|Bacteroidetes	S	AI-2E family transporter	-	-	-	-	-	-	-	-	-	-	-	-	AI-2E_transport
BYD3_k127_1770740_3	1122176.KB903554_gene3877	5.752e-46	179.0	COG3291@1|root,COG3291@2|Bacteria,4PN79@976|Bacteroidetes	976|Bacteroidetes	G	C-terminal domain of CHU protein family	-	-	-	-	-	-	-	-	-	-	-	-	CHU_C
BYD3_k127_1771780_4	1122176.KB903535_gene1959	3.471e-17	82.0	COG1159@1|root,COG1159@2|Bacteria,4NES2@976|Bacteroidetes,1INM6@117747|Sphingobacteriia	976|Bacteroidetes	S	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism	era	-	-	ko:K03595	-	-	-	-	ko00000,ko03009,ko03029	-	-	-	KH_2,MMR_HSR1
BYD3_k127_1771780_1	760192.Halhy_1296	2.339e-187	594.0	COG1160@1|root,COG1160@2|Bacteria,4NE2J@976|Bacteroidetes,1IR18@117747|Sphingobacteriia	976|Bacteroidetes	S	GTPase that plays an essential role in the late steps of ribosome biogenesis	der	-	-	ko:K03977	-	-	-	-	ko00000,ko03009	-	-	-	KH_dom-like,MMR_HSR1
BYD3_k127_1771780_3	861454.HMPREF9099_02093	6.279e-60	214.0	COG1898@1|root,COG1898@2|Bacteria,1TRVB@1239|Firmicutes,248VX@186801|Clostridia,27JD4@186928|unclassified Lachnospiraceae	186801|Clostridia	M	Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4- hexulose	rfbC	-	5.1.3.13	ko:K01790	ko00521,ko00523,ko01130,map00521,map00523,map01130	M00793	R06514	RC01531	ko00000,ko00001,ko00002,ko01000	-	-	iHN637.CLJU_RS02630,iHN637.CLJU_RS02745	dTDP_sugar_isom
BYD3_k127_1771780_2	760192.Halhy_1294	9.106e-68	241.0	COG1091@1|root,COG1091@2|Bacteria,4NE3K@976|Bacteroidetes,1IP3S@117747|Sphingobacteriia	976|Bacteroidetes	M	Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose	rmlD	-	1.1.1.133	ko:K00067	ko00521,ko00523,ko01130,map00521,map00523,map01130	M00793	R02777	RC00182	ko00000,ko00001,ko00002,ko01000	-	-	-	RmlD_sub_bind
BYD3_k127_1771780_0	760192.Halhy_4460	2.191e-219	704.0	COG2132@1|root,COG3291@1|root,COG2132@2|Bacteria,COG3291@2|Bacteria,4NFCW@976|Bacteroidetes	976|Bacteroidetes	M	C-terminal domain of CHU protein family	-	-	-	-	-	-	-	-	-	-	-	-	CHU_C
BYD3_k127_1772357_1	869213.JCM21142_31169	3.421e-93	315.0	COG2819@1|root,COG2819@2|Bacteria,4NGJB@976|Bacteroidetes,47KMK@768503|Cytophagia	976|Bacteroidetes	S	Putative esterase	-	-	-	-	-	-	-	-	-	-	-	-	Esterase
BYD3_k127_1772357_0	1122621.ATZA01000012_gene3159	1.303e-110	371.0	COG4775@1|root,COG4775@2|Bacteria,4NHNW@976|Bacteroidetes,1IQTG@117747|Sphingobacteriia	976|Bacteroidetes	M	Surface antigen	-	-	-	-	-	-	-	-	-	-	-	-	Bac_surface_Ag
BYD3_k127_1772357_2	929556.Solca_1445	1.022e-42	161.0	2ATWF@1|root,31JFP@2|Bacteria,4NQPB@976|Bacteroidetes,1ITBA@117747|Sphingobacteriia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_1786978_1	945713.IALB_2314	3.164e-35	153.0	COG4447@1|root,COG4447@2|Bacteria	2|Bacteria	S	cellulose binding	-	-	-	-	-	-	-	-	-	-	-	-	PSII_BNR
BYD3_k127_1786978_0	1122176.KB903565_gene3355	4.88e-179	577.0	COG0659@1|root,COG0659@2|Bacteria,4NFX2@976|Bacteroidetes,1IW25@117747|Sphingobacteriia	976|Bacteroidetes	P	COG0659 Sulfate permease and related	-	-	-	ko:K03321	-	-	-	-	ko00000,ko02000	2.A.53.3	-	-	STAS,Sulfate_transp
BYD3_k127_1830069_2	1185876.BN8_02441	1.662e-42	159.0	COG4977@1|root,COG4977@2|Bacteria,4PN2N@976|Bacteroidetes,47RBB@768503|Cytophagia	976|Bacteroidetes	K	helix_turn_helix, arabinose operon control protein	-	-	-	-	-	-	-	-	-	-	-	-	HTH_18
BYD3_k127_1830069_1	1341181.FLJC2902T_10670	3.14e-84	284.0	COG2085@1|root,COG2085@2|Bacteria,4NPSZ@976|Bacteroidetes,1ICXS@117743|Flavobacteriia,2NVZG@237|Flavobacterium	976|Bacteroidetes	S	NADP oxidoreductase coenzyme F420-dependent	-	-	1.5.1.40	ko:K06988	-	-	-	-	ko00000,ko01000	-	-	-	F420_oxidored
BYD3_k127_1830069_0	1120965.AUBV01000004_gene1033	3.803e-142	458.0	COG2010@1|root,COG2010@2|Bacteria,4NMGT@976|Bacteroidetes	976|Bacteroidetes	C	Cytochrome c	-	-	-	-	-	-	-	-	-	-	-	-	Cytochrom_C
BYD3_k127_1830069_3	1434325.AZQN01000010_gene3939	3.483e-32	126.0	COG0580@1|root,COG0580@2|Bacteria,4NFW4@976|Bacteroidetes,47RZK@768503|Cytophagia	976|Bacteroidetes	U	Belongs to the MIP aquaporin (TC 1.A.8) family	aqpZ	-	-	ko:K06188	-	-	-	-	ko00000,ko02000	1.A.8	-	-	MIP
BYD3_k127_1894213_0	1122176.KB903546_gene1027	1.309e-258	827.0	COG0265@1|root,COG3291@1|root,COG0265@2|Bacteria,COG3291@2|Bacteria,4PKTY@976|Bacteroidetes	976|Bacteroidetes	O	ASPIC and UnbV	-	-	-	-	-	-	-	-	-	-	-	-	FG-GAP,MAM,UnbV_ASPIC,VCBS,fn3
BYD3_k127_1894213_1	760192.Halhy_5857	5.697e-23	111.0	COG3210@1|root,COG3210@2|Bacteria	2|Bacteria	U	domain, Protein	-	-	-	-	-	-	-	-	-	-	-	-	DUF11,DUF4347,Fil_haemagg_2,HemolysinCabind,Lectin_C
BYD3_k127_1895970_7	1121481.AUAS01000004_gene1437	2.412e-77	262.0	COG2353@1|root,COG2353@2|Bacteria,4NNMD@976|Bacteroidetes,47PQN@768503|Cytophagia	976|Bacteroidetes	S	YceI-like domain	-	-	-	-	-	-	-	-	-	-	-	-	YceI
BYD3_k127_1895970_3	926559.JoomaDRAFT_0554	2.059e-126	410.0	COG3384@1|root,COG3384@2|Bacteria,4NFGT@976|Bacteroidetes,1HX1P@117743|Flavobacteriia	976|Bacteroidetes	S	in asymptomatic bacteriuria E. coli strains 83972 and VR50, the ygiD gene is upregulated during biofilm formation in urine	-	-	-	ko:K15777	ko00965,map00965	-	R08836	RC00387	ko00000,ko00001,ko01000	-	-	-	LigB
BYD3_k127_1895970_1	472759.Nhal_1939	1.646e-137	455.0	COG0457@1|root,COG0457@2|Bacteria,1N0A9@1224|Proteobacteria,1RZSZ@1236|Gammaproteobacteria	1236|Gammaproteobacteria	S	COG0457 FOG TPR repeat	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_1895970_8	700598.Niako_3433	3.528e-53	194.0	COG0454@1|root,COG0456@2|Bacteria,4PMDG@976|Bacteroidetes,1J0T1@117747|Sphingobacteriia	976|Bacteroidetes	K	acetyltransferase	-	-	-	-	-	-	-	-	-	-	-	-	Acetyltransf_1
BYD3_k127_1895970_2	468059.AUHA01000002_gene1349	2.706e-133	442.0	COG0659@1|root,COG0659@2|Bacteria,4NE9G@976|Bacteroidetes,1INYY@117747|Sphingobacteriia	976|Bacteroidetes	P	COGs COG0659 Sulfate permease and related transporter (MFS superfamily)	-	-	4.2.1.1	ko:K01673,ko:K03321	ko00910,map00910	-	R00132,R10092	RC02807	ko00000,ko00001,ko01000,ko02000	2.A.53.3	-	-	Pro_CA,Sulfate_transp
BYD3_k127_1895970_0	1086011.HJ01_01867	0.0	1038.0	COG0474@1|root,COG0474@2|Bacteria,4NERM@976|Bacteroidetes,1HY67@117743|Flavobacteriia,2NT0H@237|Flavobacterium	976|Bacteroidetes	P	Cation transporter/ATPase, N-terminus	-	-	3.6.3.8	ko:K01537	-	-	-	-	ko00000,ko01000	3.A.3.2	-	-	Cation_ATPase_C,Cation_ATPase_N,E1-E2_ATPase,Hydrolase
BYD3_k127_1895970_13	929556.Solca_0297	4.388e-18	96.0	COG0589@1|root,COG0589@2|Bacteria,4NPYE@976|Bacteroidetes,1ISGK@117747|Sphingobacteriia	976|Bacteroidetes	T	Universal stress protein	-	-	-	-	-	-	-	-	-	-	-	-	Usp
BYD3_k127_1895970_4	1122176.KB903539_gene1396	6.826e-112	376.0	COG0642@1|root,COG2205@2|Bacteria,4NG0Y@976|Bacteroidetes,1IPHZ@117747|Sphingobacteriia	976|Bacteroidetes	T	PFAM Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase	-	-	-	-	-	-	-	-	-	-	-	-	HATPase_c,HisKA,PAS,PAS_9,Response_reg
BYD3_k127_1895970_6	1313421.JHBV01000041_gene3683	1.157e-83	290.0	COG0664@1|root,COG0745@1|root,COG0664@2|Bacteria,COG0745@2|Bacteria,4NFB1@976|Bacteroidetes,1INRY@117747|Sphingobacteriia	976|Bacteroidetes	T	COGs COG0664 cAMP-binding protein - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase	crp	-	-	-	-	-	-	-	-	-	-	-	HTH_Crp_2,Response_reg,cNMP_binding
BYD3_k127_1895970_9	1122176.KB903541_gene285	5.786e-47	179.0	COG0589@1|root,COG0589@2|Bacteria,4NHXF@976|Bacteroidetes,1ISXT@117747|Sphingobacteriia	976|Bacteroidetes	T	Belongs to the universal stress protein A family	-	-	-	-	-	-	-	-	-	-	-	-	Usp
BYD3_k127_1895970_12	1122176.KB903554_gene3978	8.021e-26	113.0	COG0517@1|root,COG0517@2|Bacteria	2|Bacteria	S	IMP dehydrogenase activity	-	-	-	ko:K04767,ko:K07182	-	-	-	-	ko00000	-	-	-	CBS
BYD3_k127_1895970_10	760192.Halhy_2681	2.057e-38	147.0	COG0517@1|root,COG0517@2|Bacteria,4NZCM@976|Bacteroidetes	976|Bacteroidetes	S	Domain in cystathionine beta-synthase and other proteins.	-	-	-	-	-	-	-	-	-	-	-	-	CBS
BYD3_k127_1895970_11	760192.Halhy_2299	2.159e-27	116.0	COG0071@1|root,COG0071@2|Bacteria,4NQXY@976|Bacteroidetes	976|Bacteroidetes	O	Belongs to the small heat shock protein (HSP20) family	-	-	-	ko:K13993	ko04141,map04141	-	-	-	ko00000,ko00001,ko03110	-	-	-	HSP20
BYD3_k127_1895970_5	860228.Ccan_10730	1.023e-84	284.0	COG2759@1|root,COG2759@2|Bacteria,4NG3E@976|Bacteroidetes,1HXR5@117743|Flavobacteriia,1EREB@1016|Capnocytophaga	976|Bacteroidetes	H	Formyltetrahydrofolate synthetase	fhs	GO:0003674,GO:0003824,GO:0004329,GO:0004477,GO:0004488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006144,GO:0006575,GO:0006725,GO:0006732,GO:0006760,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009112,GO:0009113,GO:0009256,GO:0009257,GO:0009396,GO:0009987,GO:0016053,GO:0016491,GO:0016645,GO:0016646,GO:0016787,GO:0016810,GO:0016814,GO:0016874,GO:0016879,GO:0018130,GO:0019238,GO:0019438,GO:0019752,GO:0034641,GO:0042398,GO:0042440,GO:0042558,GO:0042559,GO:0043436,GO:0043603,GO:0043604,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046112,GO:0046148,GO:0046394,GO:0046483,GO:0046653,GO:0046654,GO:0051186,GO:0051188,GO:0055086,GO:0055114,GO:0071704,GO:0072521,GO:0072522,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576	6.3.4.3	ko:K01938	ko00670,ko00720,ko01100,ko01120,ko01200,map00670,map00720,map01100,map01120,map01200	M00140,M00377	R00943	RC00026,RC00111	ko00000,ko00001,ko00002,ko01000	-	-	-	FTHFS
BYD3_k127_1939224_1	1122176.KB903569_gene3479	2.164e-23	117.0	COG2931@1|root,COG3210@1|root,COG2931@2|Bacteria,COG3210@2|Bacteria,4NIKN@976|Bacteroidetes	976|Bacteroidetes	Q	Animal haem peroxidase	-	-	-	-	-	-	-	-	-	-	-	-	An_peroxidase
BYD3_k127_1939224_3	1122176.KB903546_gene1024	2.097e-05	58.0	COG1858@1|root,COG1858@2|Bacteria,4NJGU@976|Bacteroidetes,1J099@117747|Sphingobacteriia	976|Bacteroidetes	P	Di-haem cytochrome c peroxidase	-	-	1.11.1.5	ko:K00428	-	-	-	-	ko00000,ko01000	-	-	-	CCP_MauG
BYD3_k127_1939224_2	1379698.RBG1_1C00001G1401	2.365e-12	81.0	COG1520@1|root,COG1520@2|Bacteria,2NQ51@2323|unclassified Bacteria	2|Bacteria	O	NHL repeat containing protein	-	-	-	-	-	-	-	-	-	-	-	-	DUF5122,PQQ_2,SBBP
BYD3_k127_1939224_0	1122176.KB903609_gene5217	1.654e-79	275.0	COG4485@1|root,COG4485@2|Bacteria,4NEE5@976|Bacteroidetes,1IP87@117747|Sphingobacteriia	976|Bacteroidetes	S	Bacterial membrane protein YfhO	-	-	-	-	-	-	-	-	-	-	-	-	YfhO
BYD3_k127_1940068_4	657309.BXY_22350	7.817e-40	148.0	COG0012@1|root,COG0012@2|Bacteria,4NF7N@976|Bacteroidetes,2FMWX@200643|Bacteroidia,4AMIJ@815|Bacteroidaceae	976|Bacteroidetes	J	ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner	ychF	-	-	ko:K06942	-	-	-	-	ko00000,ko03009	-	-	-	MMR_HSR1,YchF-GTPase_C
BYD3_k127_1940068_1	1122176.KB903609_gene5268	1.84e-178	562.0	COG0022@1|root,COG0022@2|Bacteria,4NE4N@976|Bacteroidetes,1IPGW@117747|Sphingobacteriia	976|Bacteroidetes	C	COG0022 Pyruvate 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit	pdhB	-	1.2.4.1	ko:K00162	ko00010,ko00020,ko00620,ko01100,ko01110,ko01120,ko01130,ko01200,ko04066,ko04922,ko05230,map00010,map00020,map00620,map01100,map01110,map01120,map01130,map01200,map04066,map04922,map05230	M00307	R00014,R00209,R01699,R03270	RC00004,RC00027,RC00627,RC02742,RC02744,RC02882	br01601,ko00000,ko00001,ko00002,ko01000	-	-	-	Transket_pyr,Transketolase_C
BYD3_k127_1940068_5	203275.BFO_1762	7.006e-23	109.0	COG2177@1|root,COG2177@2|Bacteria,4NH05@976|Bacteroidetes,2FM17@200643|Bacteroidia,22WWC@171551|Porphyromonadaceae	976|Bacteroidetes	D	Belongs to the ABC-4 integral membrane protein family. FtsX subfamily	ftsX	GO:0005575,GO:0005618,GO:0005623,GO:0006928,GO:0008150,GO:0009274,GO:0009276,GO:0009605,GO:0009607,GO:0009615,GO:0009987,GO:0030312,GO:0030313,GO:0031975,GO:0040011,GO:0043207,GO:0044464,GO:0048870,GO:0050896,GO:0051179,GO:0051301,GO:0051674,GO:0051704,GO:0051707,GO:0071944,GO:0071976	-	ko:K09811	ko02010,map02010	M00256	-	-	ko00000,ko00001,ko00002,ko02000,ko03036	3.A.1.140	-	-	FtsX
BYD3_k127_1940068_2	1122176.KB903553_gene3621	1.109e-113	383.0	COG0526@1|root,COG0526@2|Bacteria,4NHEC@976|Bacteroidetes,1IXCQ@117747|Sphingobacteriia	976|Bacteroidetes	CO	PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen	-	-	-	-	-	-	-	-	-	-	-	-	AhpC-TSA,DUF4369,DUF5106,Thioredoxin_8
BYD3_k127_1940068_3	1122176.KB903587_gene4398	1.113e-64	227.0	COG3597@1|root,COG3597@2|Bacteria,4NSI8@976|Bacteroidetes	976|Bacteroidetes	S	Domain of unknown function (DUF697)	-	-	-	-	-	-	-	-	-	-	-	-	DUF697,SHOCT
BYD3_k127_1940068_0	984262.SGRA_3297	2.771e-275	883.0	COG2373@1|root,COG2373@2|Bacteria,4NED2@976|Bacteroidetes,1IQPG@117747|Sphingobacteriia	976|Bacteroidetes	S	COG2373 Large extracellular alpha-helical protein	-	-	-	-	-	-	-	-	-	-	-	-	A2M,A2M_N,A2M_N_2,CarbopepD_reg_2,Plug
BYD3_k127_1951681_4	1268240.ATFI01000004_gene4380	3.753e-13	70.0	COG0745@1|root,COG0745@2|Bacteria	1268240.ATFI01000004_gene4380|-	T	phosphorelay signal transduction system	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_1951681_0	880073.Calab_1888	6.685e-244	771.0	COG1082@1|root,COG1082@2|Bacteria	2|Bacteria	G	myo-inosose-2 dehydratase activity	susB	GO:0000272,GO:0003674,GO:0003824,GO:0004339,GO:0004553,GO:0004558,GO:0005488,GO:0005509,GO:0005575,GO:0005623,GO:0005886,GO:0005975,GO:0005976,GO:0005982,GO:0005983,GO:0006073,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009251,GO:0009987,GO:0015926,GO:0016020,GO:0016052,GO:0016787,GO:0016798,GO:0043167,GO:0043169,GO:0043170,GO:0044042,GO:0044237,GO:0044238,GO:0044247,GO:0044248,GO:0044260,GO:0044262,GO:0044264,GO:0044275,GO:0044464,GO:0046872,GO:0071704,GO:0071944,GO:0090599,GO:1901575	3.2.1.20,3.2.1.3	ko:K01187,ko:K21574	ko00052,ko00500,ko01100,map00052,map00500,map01100	-	R00028,R00801,R00802,R01790,R01791,R06087,R06088	RC00028,RC00049,RC00077	ko00000,ko00001,ko01000	-	GH31,GH97	-	GH97_C,GH97_N,Glyco_hydro_97
BYD3_k127_1951681_2	1124780.ANNU01000016_gene1839	7.335e-136	443.0	COG1572@1|root,COG1572@2|Bacteria,4PP87@976|Bacteroidetes	976|Bacteroidetes	NU	bacterial-type flagellum-dependent cell motility	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_1951681_1	1124780.ANNU01000016_gene1838	1.537e-229	720.0	COG0702@1|root,COG0702@2|Bacteria	2|Bacteria	GM	epimerase	-	-	1.14.14.47	ko:K00491,ko:K21572	ko00220,ko00330,ko01100,ko01110,map00220,map00330,map01100,map01110	-	R11711,R11712,R11713	RC00177,RC00330,RC01044	ko00000,ko00001,ko01000,ko02000	8.A.46.1,8.A.46.3	-	-	EF-hand_5,FAD_binding_6,Fer2_BFD,NAD_binding_1,NAD_binding_10,NO_synthase,SusD-like_3,SusD_RagB
BYD3_k127_1962765_6	1122176.KB903532_gene2558	2.539e-35	141.0	2AN5I@1|root,31D3D@2|Bacteria,4NQTI@976|Bacteroidetes,1ITEI@117747|Sphingobacteriia	976|Bacteroidetes	S	Domain of unknown function (DUF4920)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4920
BYD3_k127_1962765_0	1122176.KB903532_gene2559	1.654e-117	394.0	COG4249@1|root,COG4642@1|root,COG4249@2|Bacteria,COG4642@2|Bacteria,4NJPY@976|Bacteroidetes,1IYYK@117747|Sphingobacteriia	976|Bacteroidetes	S	Possible plasma membrane-binding motif in junctophilins, PIP-5-kinases and protein kinases.	-	-	2.7.11.1	ko:K12132	-	-	-	-	ko00000,ko01000,ko01001	-	-	-	MORN
BYD3_k127_1962765_4	1122176.KB903560_gene3561	2.726e-40	154.0	COG0360@1|root,COG0360@2|Bacteria,4NQ9W@976|Bacteroidetes,1ISJI@117747|Sphingobacteriia	976|Bacteroidetes	J	Binds together with S18 to 16S ribosomal RNA	rpsF	GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015935,GO:0019843,GO:0022626,GO:0022627,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0070181,GO:0097159,GO:1901363,GO:1990904	-	ko:K02990	ko03010,map03010	M00178	-	-	br01610,ko00000,ko00001,ko00002,ko03011,ko03029	-	-	-	Ribosomal_S6
BYD3_k127_1962765_3	760192.Halhy_3310	7.233e-41	152.0	COG0238@1|root,COG0238@2|Bacteria,4NSAR@976|Bacteroidetes,1ISSH@117747|Sphingobacteriia	976|Bacteroidetes	J	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit	rpsR	GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904	-	ko:K02963	ko03010,map03010	M00178	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_S18
BYD3_k127_1962765_2	1122176.KB903560_gene3563	4.697e-46	170.0	COG0359@1|root,COG0359@2|Bacteria,4NNRP@976|Bacteroidetes,1IRUM@117747|Sphingobacteriia	976|Bacteroidetes	J	binds to the 23S rRNA	rplI	GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904	-	ko:K02939	ko03010,map03010	M00178	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_L9_C,Ribosomal_L9_N
BYD3_k127_1962765_5	760192.Halhy_4078	1.934e-39	159.0	COG3386@1|root,COG3386@2|Bacteria,4NHFU@976|Bacteroidetes,1IWD9@117747|Sphingobacteriia	976|Bacteroidetes	G	Domain of unknown function (DUF4394)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4394
BYD3_k127_1962765_1	760192.Halhy_4078	1.643e-48	181.0	COG3386@1|root,COG3386@2|Bacteria,4NHFU@976|Bacteroidetes,1IWD9@117747|Sphingobacteriia	976|Bacteroidetes	G	Domain of unknown function (DUF4394)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4394
BYD3_k127_1993816_1	1122176.KB903576_gene4938	2.656e-103	349.0	COG1572@1|root,COG1572@2|Bacteria,4NDY7@976|Bacteroidetes,1IW9T@117747|Sphingobacteriia	976|Bacteroidetes	S	Peptidase family C25	porU	-	-	-	-	-	-	-	-	-	-	-	Peptidase_C25
BYD3_k127_1993816_0	760192.Halhy_4796	5.765e-114	378.0	COG2067@1|root,COG2067@2|Bacteria,4NDZW@976|Bacteroidetes,1IPX7@117747|Sphingobacteriia	976|Bacteroidetes	I	long-chain fatty acid transport protein	porV	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_2017889_2	926549.KI421517_gene552	2.816e-101	334.0	COG4992@1|root,COG4992@2|Bacteria,4NE93@976|Bacteroidetes,47K80@768503|Cytophagia	976|Bacteroidetes	E	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family	rocD	-	2.6.1.13	ko:K00819	ko00330,ko01100,ko01110,ko01130,map00330,map01100,map01110,map01130	-	R00667	RC00006,RC00062	ko00000,ko00001,ko01000,ko01007	-	-	-	Aminotran_3
BYD3_k127_2017889_0	760192.Halhy_0145	1.729e-221	695.0	COG0621@1|root,COG0621@2|Bacteria,4NDU6@976|Bacteroidetes,1IPSP@117747|Sphingobacteriia	976|Bacteroidetes	J	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine	miaB	-	2.8.4.3	ko:K06168	-	-	R10645,R10646,R10647	RC00003,RC00980,RC03221,RC03222	ko00000,ko01000,ko03016	-	-	-	Radical_SAM,TRAM,UPF0004
BYD3_k127_2017889_1	760192.Halhy_0146	1.757e-156	503.0	COG2204@1|root,COG2204@2|Bacteria,4NDWI@976|Bacteroidetes,1IPGA@117747|Sphingobacteriia	976|Bacteroidetes	K	ATPase (AAA	fhlA	-	-	-	-	-	-	-	-	-	-	-	HTH_8,Sigma54_activat
BYD3_k127_2023081_2	1286632.P278_08250	3.486e-129	420.0	COG0329@1|root,COG0329@2|Bacteria,4NF2Z@976|Bacteroidetes,1I05Z@117743|Flavobacteriia	976|Bacteroidetes	EM	Belongs to the DapA family	-	-	3.5.4.22,4.3.3.7	ko:K01714,ko:K21062	ko00261,ko00300,ko00330,ko01100,ko01110,ko01120,ko01130,ko01230,map00261,map00300,map00330,map01100,map01110,map01120,map01130,map01230	M00016,M00525,M00526,M00527	R02280,R10147	RC00679,RC03062,RC03063	ko00000,ko00001,ko00002,ko01000	-	-	-	DHDPS
BYD3_k127_2023081_0	1286632.P278_08260	8.023e-147	480.0	COG1012@1|root,COG1012@2|Bacteria,4NEKG@976|Bacteroidetes,1HX1F@117743|Flavobacteriia	976|Bacteroidetes	C	Aldehyde	aldH	-	1.2.1.26,1.2.1.4	ko:K13877,ko:K14519	ko00040,ko00053,ko00930,ko01100,ko01120,ko01220,map00040,map00053,map00930,map01100,map01120,map01220	-	R00264,R05099	RC00080	ko00000,ko00001,ko01000	-	-	-	Aldedh
BYD3_k127_2023081_4	1492737.FEM08_00480	3.035e-51	191.0	2DBBT@1|root,2Z8AC@2|Bacteria,4NIRZ@976|Bacteroidetes,1HZMZ@117743|Flavobacteriia,2NWUU@237|Flavobacterium	976|Bacteroidetes	S	Putative MetA-pathway of phenol degradation	-	-	-	-	-	-	-	-	-	-	-	-	Phenol_MetA_deg
BYD3_k127_2023081_1	761193.Runsl_0567	4.296e-140	454.0	COG2128@1|root,COG2128@2|Bacteria,4NHD5@976|Bacteroidetes,47M83@768503|Cytophagia	976|Bacteroidetes	S	Protein of unknown function (DUF3179)	-	-	-	-	-	-	-	-	-	-	-	-	DUF3179
BYD3_k127_2023081_3	929703.KE386492_gene4422	1.434e-89	303.0	COG4206@1|root,COG4772@1|root,COG4206@2|Bacteria,COG4772@2|Bacteria,4NH5V@976|Bacteroidetes,47KFP@768503|Cytophagia	976|Bacteroidetes	P	PFAM TonB-dependent Receptor	-	-	-	ko:K16091	-	-	-	-	ko00000,ko02000	1.B.14.1.14	-	-	CarbopepD_reg_2,Plug,TonB_dep_Rec
BYD3_k127_2041961_4	313606.M23134_06227	2.115e-88	294.0	COG0476@1|root,COG0476@2|Bacteria,4NFUD@976|Bacteroidetes,47KG8@768503|Cytophagia	976|Bacteroidetes	H	MoeZ MoeB domain	moeZ	-	2.7.7.80,2.8.1.11	ko:K21029,ko:K21147	ko04122,map04122	-	R07459,R07461	RC00043	ko00000,ko00001,ko01000	-	-	-	Rhodanese,ThiF
BYD3_k127_2041961_5	1121904.ARBP01000019_gene2813	3.237e-32	128.0	COG0476@1|root,COG0476@2|Bacteria,4NFUD@976|Bacteroidetes,47KG8@768503|Cytophagia	976|Bacteroidetes	H	MoeZ MoeB domain	moeZ	-	2.7.7.80,2.8.1.11	ko:K21029,ko:K21147	ko04122,map04122	-	R07459,R07461	RC00043	ko00000,ko00001,ko01000	-	-	-	Rhodanese,ThiF
BYD3_k127_2041961_3	1270193.JARP01000005_gene3725	6.842e-108	352.0	COG0450@1|root,COG0450@2|Bacteria,4NEZZ@976|Bacteroidetes,1I036@117743|Flavobacteriia,2NT3R@237|Flavobacterium	976|Bacteroidetes	O	C-terminal domain of 1-Cys peroxiredoxin	-	-	1.11.1.15	ko:K03386	ko04214,map04214	-	-	-	ko00000,ko00001,ko01000,ko04147	-	-	-	1-cysPrx_C,AhpC-TSA
BYD3_k127_2041961_1	1122176.KB903531_gene2975	1.294e-114	376.0	COG0568@1|root,COG0568@2|Bacteria,4NEBF@976|Bacteroidetes,1INNM@117747|Sphingobacteriia	976|Bacteroidetes	K	Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released	rpoD	-	-	ko:K03086	-	-	-	-	ko00000,ko03021	-	-	-	Sigma70_r1_2,Sigma70_r2,Sigma70_r3,Sigma70_r4
BYD3_k127_2041961_0	760192.Halhy_5546	2.455e-317	988.0	COG1185@1|root,COG1185@2|Bacteria,4NE4Q@976|Bacteroidetes,1INMK@117747|Sphingobacteriia	976|Bacteroidetes	J	Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction	pnp	-	2.7.7.8	ko:K00962	ko00230,ko00240,ko03018,map00230,map00240,map03018	M00394	R00437,R00438,R00439,R00440	RC02795	ko00000,ko00001,ko00002,ko01000,ko03016,ko03019	-	-	-	KH_1,PNPase,RNase_PH,RNase_PH_C,S1
BYD3_k127_2041961_6	760192.Halhy_5547	2.702e-30	123.0	COG0184@1|root,COG0184@2|Bacteria,4NS7U@976|Bacteroidetes,1ITE1@117747|Sphingobacteriia	976|Bacteroidetes	J	Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome	rpsO	GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015935,GO:0022626,GO:0022627,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904	-	ko:K02956	ko03010,map03010	M00178,M00179	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_S15
BYD3_k127_2041961_2	760192.Halhy_4261	4.171e-112	367.0	COG1694@1|root,COG3956@2|Bacteria,4NEA3@976|Bacteroidetes,1IR2F@117747|Sphingobacteriia	976|Bacteroidetes	S	PFAM MazG nucleotide pyrophosphohydrolase	mazG	-	3.6.1.66	ko:K02428	ko00230,map00230	-	R00426,R00720,R01855,R02100,R02720,R03531	RC00002	ko00000,ko00001,ko01000	-	-	-	MazG
BYD3_k127_205177_1	1313421.JHBV01000041_gene3424	2.178e-16	87.0	COG0226@1|root,COG0226@2|Bacteria	2|Bacteria	P	phosphate ion binding	-	-	-	ko:K02040	ko02010,ko02020,ko05152,map02010,map02020,map05152	M00222	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.7	-	-	PBP_like_2,PorP_SprF
BYD3_k127_205177_0	760192.Halhy_1699	8.901e-179	586.0	COG0457@1|root,COG2885@1|root,COG0457@2|Bacteria,COG2885@2|Bacteria,4NE6G@976|Bacteroidetes,1IPTT@117747|Sphingobacteriia	976|Bacteroidetes	M	OmpA MotB domain protein	-	-	-	-	-	-	-	-	-	-	-	-	CarboxypepD_reg,DUF1573,OmpA,PD40
BYD3_k127_2087947_0	1123035.ARLA01000026_gene164	1.341e-60	227.0	COG0526@1|root,COG0526@2|Bacteria,4NH2A@976|Bacteroidetes,1HXIW@117743|Flavobacteriia	976|Bacteroidetes	O	Thioredoxin	-	-	-	-	-	-	-	-	-	-	-	-	AhpC-TSA,Redoxin,Thioredoxin_8
BYD3_k127_2096843_4	1089547.KB913013_gene4278	1.756e-13	72.0	COG1940@1|root,COG1940@2|Bacteria,4NGC1@976|Bacteroidetes,47KEB@768503|Cytophagia	976|Bacteroidetes	GK	PFAM ROK family	-	-	-	-	-	-	-	-	-	-	-	-	ROK
BYD3_k127_2096843_1	929703.KE386491_gene4224	1.299e-103	344.0	COG0491@1|root,COG0491@2|Bacteria,4NHG1@976|Bacteroidetes,47N3H@768503|Cytophagia	976|Bacteroidetes	S	Metallo-beta-lactamase superfamily	-	-	-	-	-	-	-	-	-	-	-	-	Lactamase_B
BYD3_k127_2096843_3	1121904.ARBP01000001_gene5611	5.061e-39	149.0	COG1765@1|root,COG1765@2|Bacteria,4NNTY@976|Bacteroidetes,47R4T@768503|Cytophagia	976|Bacteroidetes	O	OsmC-like protein	-	-	-	ko:K07397	-	-	-	-	ko00000	-	-	-	OsmC
BYD3_k127_2096843_2	1121373.KB903625_gene3167	3.293e-94	315.0	COG1398@1|root,COG1398@2|Bacteria,4NE0I@976|Bacteroidetes,47KJ0@768503|Cytophagia	976|Bacteroidetes	I	fatty acid desaturase	-	-	1.14.19.1	ko:K00507	ko01040,ko01212,ko03320,ko04152,ko04212,map01040,map01212,map03320,map04152,map04212	-	R02222	RC00917	ko00000,ko00001,ko01000,ko01004	-	-	-	FA_desaturase
BYD3_k127_2096843_0	1313421.JHBV01000031_gene1381	1.143e-108	362.0	COG0472@1|root,COG0472@2|Bacteria,4NGKM@976|Bacteroidetes,1INPS@117747|Sphingobacteriia	976|Bacteroidetes	M	Glycosyl transferase, family 4	mraY2	-	-	-	-	-	-	-	-	-	-	-	Glycos_transf_4
BYD3_k127_2096843_5	1122176.KB903542_gene326	6.61e-10	61.0	COG3210@1|root,COG3210@2|Bacteria,4P8KP@976|Bacteroidetes,1IYSQ@117747|Sphingobacteriia	976|Bacteroidetes	U	IMG reference gene	-	-	-	-	-	-	-	-	-	-	-	-	HYR,SdrD_B,SprB
BYD3_k127_2102843_3	700598.Niako_0321	1.463e-22	100.0	COG0607@1|root,COG0607@2|Bacteria,4NVM6@976|Bacteroidetes,1IZ3G@117747|Sphingobacteriia	976|Bacteroidetes	P	Rhodanese Homology Domain	-	-	-	-	-	-	-	-	-	-	-	-	Rhodanese
BYD3_k127_2102843_2	760192.Halhy_2387	6.368e-25	114.0	COG1181@1|root,COG2815@1|root,COG1181@2|Bacteria,COG2815@2|Bacteria,4NSUI@976|Bacteroidetes	976|Bacteroidetes	M	Pasta domain	spk1	-	2.7.11.1,6.3.2.4	ko:K01921,ko:K08884,ko:K12132	ko00473,ko00550,ko01100,ko01502,map00473,map00550,map01100,map01502	-	R01150	RC00064,RC00141	ko00000,ko00001,ko01000,ko01001,ko01011	-	-	-	PASTA
BYD3_k127_2102843_1	485918.Cpin_5915	5.393e-38	151.0	COG2197@1|root,COG2197@2|Bacteria,4NSGV@976|Bacteroidetes,1ITSZ@117747|Sphingobacteriia	976|Bacteroidetes	K	response regulator, receiver	-	-	-	-	-	-	-	-	-	-	-	-	GerE,Response_reg
BYD3_k127_2102843_0	760192.Halhy_3866	1.673e-70	269.0	COG3210@1|root,COG3210@2|Bacteria	2|Bacteria	U	domain, Protein	-	-	-	ko:K20276	ko02024,map02024	-	-	-	ko00000,ko00001	-	-	-	Autotransporter,Beta_helix,Calx-beta,DUF4347,SLH,VCBS
BYD3_k127_2103200_4	1120968.AUBX01000015_gene3857	3.786e-69	243.0	COG1132@1|root,COG1132@2|Bacteria,4PKCT@976|Bacteroidetes,47M5S@768503|Cytophagia	976|Bacteroidetes	V	ABC-type multidrug transport system ATPase and permease	-	-	-	ko:K11085	ko02010,map02010	-	-	-	ko00000,ko00001,ko01000,ko02000	3.A.1.106	-	-	ABC_membrane,ABC_tran
BYD3_k127_2103200_1	1122176.KB903576_gene4964	4.561e-165	532.0	COG0206@1|root,COG0206@2|Bacteria,4NF8N@976|Bacteroidetes,1IR5B@117747|Sphingobacteriia	976|Bacteroidetes	D	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity	ftsZ	-	-	ko:K03531	ko04112,map04112	-	-	-	ko00000,ko00001,ko02048,ko03036,ko04812	-	-	-	FtsZ_C,Tubulin
BYD3_k127_2103200_0	760192.Halhy_1150	7.711e-166	534.0	COG0849@1|root,COG0849@2|Bacteria,4NE0V@976|Bacteroidetes,1IQJQ@117747|Sphingobacteriia	976|Bacteroidetes	D	Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring	ftsA	-	-	ko:K03590	ko04112,map04112	-	-	-	ko00000,ko00001,ko03036,ko04812	-	-	-	FtsA,SHS2_FTSA
BYD3_k127_2103200_5	1122176.KB903576_gene4962	1.092e-38	154.0	COG1589@1|root,COG1589@2|Bacteria,4NGPN@976|Bacteroidetes,1IRV2@117747|Sphingobacteriia	976|Bacteroidetes	M	Cell division protein	ftsQ	-	-	ko:K03589	ko04112,map04112	-	-	-	ko00000,ko00001,ko03036	-	-	-	FtsQ
BYD3_k127_2103200_3	760192.Halhy_1152	2.125e-124	413.0	COG0773@1|root,COG0773@2|Bacteria,4NE1V@976|Bacteroidetes,1INTF@117747|Sphingobacteriia	976|Bacteroidetes	M	Belongs to the MurCDEF family	murC	-	6.3.2.8	ko:K01924	ko00471,ko00550,ko01100,map00471,map00550,map01100	-	R03193	RC00064,RC00141	ko00000,ko00001,ko01000,ko01011	-	-	-	Mur_ligase,Mur_ligase_C,Mur_ligase_M
BYD3_k127_2103200_2	760192.Halhy_1153	6.085e-128	418.0	COG0707@1|root,COG0707@2|Bacteria,4NE6D@976|Bacteroidetes,1IPF4@117747|Sphingobacteriia	976|Bacteroidetes	M	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)	murG	-	2.4.1.227	ko:K02563	ko00550,ko01100,ko01502,ko04112,map00550,map01100,map01502,map04112	-	R05032,R05662	RC00005,RC00049	ko00000,ko00001,ko01000,ko01011	-	GT28	-	Glyco_tran_28_C,Glyco_transf_28
BYD3_k127_2103200_6	1122179.KB890420_gene2406	7.407e-09	57.0	COG0772@1|root,COG0772@2|Bacteria,4NFIM@976|Bacteroidetes,1IPWG@117747|Sphingobacteriia	976|Bacteroidetes	D	Belongs to the SEDS family	ftsW	-	-	ko:K03588	ko04112,map04112	-	-	-	ko00000,ko00001,ko02000,ko03036	2.A.103.1	-	-	FTSW_RODA_SPOVE
BYD3_k127_2106236_2	1121904.ARBP01000003_gene6452	0.0009869	50.0	COG2885@1|root,COG2885@2|Bacteria,4PC4J@976|Bacteroidetes,47WTJ@768503|Cytophagia	976|Bacteroidetes	M	chlorophyll binding	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_2106236_1	1122179.KB890469_gene567	0.0003402	51.0	COG0384@1|root,COG0384@2|Bacteria	2|Bacteria	S	isomerase activity	-	-	-	-	-	-	-	-	-	-	-	-	PhzC-PhzF
BYD3_k127_2106236_0	760192.Halhy_5351	3.469e-08	55.0	COG1807@1|root,COG1807@2|Bacteria,4NPS7@976|Bacteroidetes	976|Bacteroidetes	M	4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_2120750_1	1122179.KB890441_gene1065	1.233e-142	474.0	COG3291@1|root,COG3291@2|Bacteria,4NDZQ@976|Bacteroidetes,1IS57@117747|Sphingobacteriia	976|Bacteroidetes	S	C-terminal domain of CHU protein family	-	-	-	-	-	-	-	-	-	-	-	-	CHU_C
BYD3_k127_2120750_0	1313301.AUGC01000004_gene2355	2.138e-275	862.0	COG2987@1|root,COG2987@2|Bacteria,4NF2P@976|Bacteroidetes	976|Bacteroidetes	E	Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate	hutU	-	4.2.1.49	ko:K01712	ko00340,ko01100,map00340,map01100	M00045	R02914	RC00804	ko00000,ko00001,ko00002,ko01000	-	-	-	Urocanase,Urocanase_C,Urocanase_N
BYD3_k127_2120750_2	1158294.JOMI01000007_gene162	3.751e-57	212.0	COG0451@1|root,COG0451@2|Bacteria,4NEJJ@976|Bacteroidetes,2FNM5@200643|Bacteroidia	976|Bacteroidetes	M	NAD dependent epimerase dehydratase family protein	-	-	5.1.3.2	ko:K01784	ko00052,ko00520,ko01100,map00052,map00520,map01100	M00361,M00362,M00632	R00291,R02984	RC00289	ko00000,ko00001,ko00002,ko01000	-	-	-	Epimerase
BYD3_k127_2120750_3	344747.PM8797T_04345	1.383e-13	72.0	COG1446@1|root,COG1446@2|Bacteria,2IZ4V@203682|Planctomycetes	203682|Planctomycetes	E	PFAM peptidase T2 asparaginase 2	-	-	3.4.19.5,3.5.1.26	ko:K01444,ko:K13051	ko00511,ko04142,map00511,map04142	-	-	-	ko00000,ko00001,ko01000,ko01002	-	-	-	Asparaginase_2,DUF4440
BYD3_k127_2140160_3	1121875.KB907555_gene378	7.2e-13	68.0	COG1463@1|root,COG1463@2|Bacteria,4NHT9@976|Bacteroidetes,1HXN5@117743|Flavobacteriia	976|Bacteroidetes	Q	ABC-type transport system involved in resistance to organic solvents periplasmic component	-	-	-	ko:K02067	ko02010,map02010	M00210,M00669,M00670	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.27	-	-	MlaD
BYD3_k127_2140160_1	1120965.AUBV01000009_gene2971	7.429e-63	239.0	COG0457@1|root,COG0457@2|Bacteria,4NKED@976|Bacteroidetes,47N3J@768503|Cytophagia	976|Bacteroidetes	S	Tetratricopeptide repeat	-	-	-	-	-	-	-	-	-	-	-	-	TPR_12,TPR_7,TPR_8
BYD3_k127_2140160_5	153721.MYP_1891	4.097e-07	61.0	2C85E@1|root,335NV@2|Bacteria,4NVTV@976|Bacteroidetes,47S04@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	PCMD
BYD3_k127_2140160_4	1229487.AMYW01000018_gene4156	8.14e-13	82.0	COG1404@1|root,COG1404@2|Bacteria,4NFMW@976|Bacteroidetes,1I06M@117743|Flavobacteriia,2NUXW@237|Flavobacterium	976|Bacteroidetes	O	Subtilase family	-	-	-	-	-	-	-	-	-	-	-	-	PKD,P_proprotein,Peptidase_S8,fn3
BYD3_k127_2140160_2	1123508.JH636439_gene1132	6.816e-26	124.0	COG1520@1|root,COG2373@1|root,COG2931@1|root,COG3386@1|root,COG4932@1|root,COG1520@2|Bacteria,COG2373@2|Bacteria,COG2931@2|Bacteria,COG3386@2|Bacteria,COG4932@2|Bacteria,2J4W7@203682|Planctomycetes	2|Bacteria	G	Pkd domain containing protein	-	-	-	-	-	-	-	-	-	-	-	-	CHRD,CHU_C,DUF11,DUF4347,SdrD_B
BYD3_k127_2140160_0	1121104.AQXH01000004_gene36	1.042e-94	314.0	COG2066@1|root,COG2066@2|Bacteria,4NERJ@976|Bacteroidetes,1ISZR@117747|Sphingobacteriia	976|Bacteroidetes	E	Belongs to the glutaminase family	glsA	-	3.5.1.2	ko:K01425	ko00220,ko00250,ko00471,ko01100,ko04724,ko04727,ko04964,ko05206,ko05230,map00220,map00250,map00471,map01100,map04724,map04727,map04964,map05206,map05230	-	R00256,R01579	RC00010,RC02798	ko00000,ko00001,ko01000	-	-	-	Glutaminase
BYD3_k127_2147905_2	1158294.JOMI01000007_gene513	2.072e-37	150.0	COG0340@1|root,COG0340@2|Bacteria,4NHCH@976|Bacteroidetes,2FMM7@200643|Bacteroidia	976|Bacteroidetes	H	biotin acetyl-CoA-carboxylase ligase	birA	-	6.3.4.15	ko:K03524	ko00780,ko01100,map00780,map01100	-	R01074,R05145	RC00043,RC00070,RC00096,RC02896	ko00000,ko00001,ko01000,ko03000	-	-	-	BPL_LplA_LipB
BYD3_k127_2147905_1	1122179.KB890434_gene881	1.378e-38	147.0	COG0799@1|root,COG0799@2|Bacteria,4NSKK@976|Bacteroidetes,1ISS0@117747|Sphingobacteriia	976|Bacteroidetes	S	Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation	rsfS	-	-	ko:K09710	-	-	-	-	ko00000,ko03009	-	-	-	RsfS
BYD3_k127_2147905_0	760192.Halhy_3582	5.969e-291	907.0	COG0465@1|root,COG0465@2|Bacteria,4NF0E@976|Bacteroidetes,1IQ2Z@117747|Sphingobacteriia	976|Bacteroidetes	O	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins	ftsH	-	-	ko:K03798	-	M00742	-	-	ko00000,ko00002,ko01000,ko01002,ko03110	-	-	-	AAA,FtsH_ext,Peptidase_M41
BYD3_k127_2191207_2	1122176.KB903554_gene3936	3.258e-75	256.0	COG0252@1|root,COG0252@2|Bacteria,4NRB3@976|Bacteroidetes,1IXAX@117747|Sphingobacteriia	976|Bacteroidetes	EJ	Asparaginase, N-terminal	-	-	3.5.1.1	ko:K01424	ko00250,ko00460,ko01100,ko01110,map00250,map00460,map01100,map01110	-	R00485	RC00010,RC02798	ko00000,ko00001,ko01000	-	-	-	Asparaginase
BYD3_k127_2191207_0	1124780.ANNU01000072_gene1055	1.89e-180	588.0	COG0612@1|root,COG0612@2|Bacteria,4NEPT@976|Bacteroidetes,47M2G@768503|Cytophagia	976|Bacteroidetes	S	Peptidase M16 inactive domain	-	-	-	-	-	-	-	-	-	-	-	-	Peptidase_M16,Peptidase_M16_C
BYD3_k127_2191207_1	880071.Fleli_2408	5.913e-130	421.0	COG0612@1|root,COG0612@2|Bacteria,4NEDZ@976|Bacteroidetes,47M1B@768503|Cytophagia	976|Bacteroidetes	S	PFAM Peptidase M16 inactive domain	-	-	-	-	-	-	-	-	-	-	-	-	Peptidase_M16,Peptidase_M16_C
BYD3_k127_2200462_2	1239962.C943_04278	4.249e-38	146.0	COG0793@1|root,COG0793@2|Bacteria,4NFEN@976|Bacteroidetes,47PTG@768503|Cytophagia	976|Bacteroidetes	M	PFAM Peptidase family S41	-	-	-	-	-	-	-	-	-	-	-	-	Peptidase_S41,Tricorn_C1
BYD3_k127_2200462_1	1185876.BN8_01161	4.533e-65	236.0	COG2972@1|root,COG2972@2|Bacteria,4P15Q@976|Bacteroidetes,47UH7@768503|Cytophagia	976|Bacteroidetes	T	Histidine kinase	-	-	-	-	-	-	-	-	-	-	-	-	His_kinase
BYD3_k127_2200462_0	1279009.ADICEAN_03634	3.555e-83	283.0	COG3279@1|root,COG3279@2|Bacteria,4NGBF@976|Bacteroidetes,47M8M@768503|Cytophagia	976|Bacteroidetes	K	Two component transcriptional regulator, LytTR family	-	-	-	ko:K02477	-	-	-	-	ko00000,ko02022	-	-	-	LytTR,Response_reg
BYD3_k127_2200462_3	1246995.AFR_39020	1.04e-37	147.0	COG3828@1|root,COG3828@2|Bacteria,2GJW0@201174|Actinobacteria,4D8K4@85008|Micromonosporales	201174|Actinobacteria	G	Domain of Unknown Function (DUF1080)	-	-	-	-	-	-	-	-	-	-	-	-	CBM_6,DUF1080,RicinB_lectin_2,Ricin_B_lectin,ThuA
BYD3_k127_2224996_2	1122179.KB890463_gene2126	7.234e-33	134.0	COG2849@1|root,COG2849@2|Bacteria	2|Bacteria	-	-	-	-	-	ko:K07126	-	-	-	-	ko00000	-	-	-	MORN_2
BYD3_k127_2224996_1	984262.SGRA_1641	1.335e-70	252.0	COG2067@1|root,COG2067@2|Bacteria,4NHNC@976|Bacteroidetes,1IXQD@117747|Sphingobacteriia	976|Bacteroidetes	I	penicillin-binding protein	porQ	-	-	-	-	-	-	-	-	-	-	-	PorP_SprF
BYD3_k127_2224996_0	983548.Krodi_0174	3.178e-77	272.0	COG2114@1|root,COG2114@2|Bacteria,4NG5A@976|Bacteroidetes,1HYY0@117743|Flavobacteriia,37E6Y@326319|Dokdonia	976|Bacteroidetes	T	Adenylyl- / guanylyl cyclase, catalytic domain	-	-	4.6.1.1	ko:K01768	ko00230,ko02025,ko04113,ko04213,map00230,map02025,map04113,map04213	M00695	R00089,R00434	RC00295	ko00000,ko00001,ko00002,ko01000	-	-	-	Guanylate_cyc
BYD3_k127_2224996_3	1122176.KB903542_gene359	8.727e-27	114.0	COG1508@1|root,COG1508@2|Bacteria,4NE5B@976|Bacteroidetes,1IQIK@117747|Sphingobacteriia	976|Bacteroidetes	K	RNA polymerase, sigma-54 factor	rpoN	-	-	ko:K03092	ko02020,ko05111,map02020,map05111	-	-	-	ko00000,ko00001,ko03021	-	-	-	Sigma54_AID,Sigma54_CBD,Sigma54_DBD
BYD3_k127_2276862_2	1122176.KB903545_gene920	2.116e-85	287.0	COG0717@1|root,COG0717@2|Bacteria,4NFRS@976|Bacteroidetes,1IPNT@117747|Sphingobacteriia	976|Bacteroidetes	F	Deoxycytidine triphosphate deaminase	dcd	-	3.5.4.13	ko:K01494	ko00240,ko01100,map00240,map01100	M00053	R00568,R02325	RC00074	ko00000,ko00001,ko00002,ko01000	-	-	-	-
BYD3_k127_2276862_3	1122176.KB903541_gene272	7.599e-28	121.0	COG2091@1|root,COG2091@2|Bacteria,4NSBI@976|Bacteroidetes,1IRVW@117747|Sphingobacteriia	976|Bacteroidetes	H	Belongs to the P-Pant transferase superfamily	sfp	-	-	-	-	-	-	-	-	-	-	-	ACPS
BYD3_k127_2276862_4	1122176.KB903535_gene1977	7.088e-17	89.0	2EHKQ@1|root,33BCG@2|Bacteria,4NZQK@976|Bacteroidetes	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	DUF4348
BYD3_k127_2276862_0	1313301.AUGC01000010_gene889	2.209e-118	388.0	COG0451@1|root,COG0451@2|Bacteria,4NIZG@976|Bacteroidetes	976|Bacteroidetes	GM	Catalyzes the interconversion between ADP-D-glycero- beta-D-manno-heptose and ADP-L-glycero-beta-D-manno-heptose via an epimerization at carbon 6 of the heptose	hldD	-	5.1.3.20	ko:K03274	ko00540,ko01100,map00540,map01100	M00064	R05176	RC01291	ko00000,ko00001,ko00002,ko01000,ko01005	-	-	-	Epimerase
BYD3_k127_2276862_1	984262.SGRA_3183	5.772e-94	312.0	COG0403@1|root,COG1003@1|root,COG0403@2|Bacteria,COG1003@2|Bacteria,4NEDE@976|Bacteroidetes,1INQX@117747|Sphingobacteriia	976|Bacteroidetes	E	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor	gcvP	-	1.4.4.2	ko:K00281,ko:K00283	ko00260,ko00630,ko01100,ko01110,ko01130,ko01200,map00260,map00630,map01100,map01110,map01130,map01200	M00532	R01221,R03425	RC00022,RC00929,RC02834,RC02880	ko00000,ko00001,ko00002,ko01000	-	-	-	GDC-P
BYD3_k127_2308939_6	1317122.ATO12_12780	5.302e-25	106.0	2EBPV@1|root,335PY@2|Bacteria,4P5WA@976|Bacteroidetes,1IMCC@117743|Flavobacteriia,2YJWJ@290174|Aquimarina	976|Bacteroidetes	S	Protein of unknown function (DUF1360)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1360
BYD3_k127_2308939_5	1121875.KB907553_gene24	7.154e-27	110.0	COG0412@1|root,COG1262@1|root,COG2114@1|root,COG0412@2|Bacteria,COG1262@2|Bacteria,COG2114@2|Bacteria,4PPKM@976|Bacteroidetes	976|Bacteroidetes	T	Adenylyl- / guanylyl cyclase, catalytic domain	-	-	-	-	-	-	-	-	-	-	-	-	Guanylate_cyc
BYD3_k127_2308939_0	1267534.KB906756_gene667	6.297e-318	1045.0	COG0642@1|root,COG2199@1|root,COG2203@1|root,COG3292@1|root,COG2203@2|Bacteria,COG2205@2|Bacteria,COG3292@2|Bacteria,COG3706@2|Bacteria	2|Bacteria	T	GGDEF domain	-	-	-	-	-	-	-	-	-	-	-	-	GAF,GAF_2,HATPase_c,HisKA,PilZ,Response_reg,Y_Y_Y
BYD3_k127_2308939_4	1121875.KB907549_gene1769	2.086e-51	187.0	COG0745@1|root,COG0745@2|Bacteria,4NVP7@976|Bacteroidetes,1I5B4@117743|Flavobacteriia	976|Bacteroidetes	T	cheY-homologous receiver domain	-	-	-	-	-	-	-	-	-	-	-	-	Response_reg
BYD3_k127_2308939_1	313596.RB2501_04010	2.151e-125	421.0	COG2114@1|root,COG2114@2|Bacteria,4PMA6@976|Bacteroidetes,1IJPA@117743|Flavobacteriia	976|Bacteroidetes	T	GAF domain	-	-	-	-	-	-	-	-	-	-	-	-	GAF_3,Guanylate_cyc
BYD3_k127_2308939_3	700598.Niako_2950	3.168e-86	297.0	COG0457@1|root,COG2114@1|root,COG5616@1|root,COG0457@2|Bacteria,COG2114@2|Bacteria,COG5616@2|Bacteria,4NFW7@976|Bacteroidetes,1IR3J@117747|Sphingobacteriia	976|Bacteroidetes	K	Tetratricopeptide repeat	-	-	-	-	-	-	-	-	-	-	-	-	Guanylate_cyc,HTH_18,TPR_16,TPR_2,TPR_8
BYD3_k127_2308939_2	468059.AUHA01000002_gene563	5.805e-118	386.0	COG0457@1|root,COG2114@1|root,COG5616@1|root,COG0457@2|Bacteria,COG2114@2|Bacteria,COG5616@2|Bacteria,4NFW7@976|Bacteroidetes,1IR3J@117747|Sphingobacteriia	976|Bacteroidetes	K	Tetratricopeptide repeat	-	-	-	-	-	-	-	-	-	-	-	-	ANAPC3,Guanylate_cyc,HTH_18,TPR_8
BYD3_k127_2347497_3	1313421.JHBV01000029_gene2012	1.342e-20	93.0	COG0438@1|root,COG0438@2|Bacteria,4NH7K@976|Bacteroidetes,1IWXG@117747|Sphingobacteriia	976|Bacteroidetes	M	PFAM Glycosyl transferases group 1	-	-	-	-	-	-	-	-	-	-	-	-	Glyco_trans_1_4,Glyco_transf_4,Glycos_transf_1
BYD3_k127_2347497_0	1120966.AUBU01000002_gene2018	6.701e-160	524.0	COG0514@1|root,COG0514@2|Bacteria,4NEFD@976|Bacteroidetes,47M73@768503|Cytophagia	976|Bacteroidetes	L	ATP-dependent DNA helicase RecQ	recQ2	-	3.6.4.12	ko:K03654	ko03018,map03018	-	-	-	ko00000,ko00001,ko01000,ko03400	-	-	-	DEAD,Helicase_C,RecQ_Zn_bind
BYD3_k127_2347497_2	1313421.JHBV01000043_gene3004	2.108e-28	127.0	COG3637@1|root,COG3637@2|Bacteria,4NQ11@976|Bacteroidetes,1J0BI@117747|Sphingobacteriia	976|Bacteroidetes	M	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety	-	-	-	-	-	-	-	-	-	-	-	-	OMP_b-brl
BYD3_k127_2347497_1	760192.Halhy_5744	2.449e-130	434.0	COG1404@1|root,COG1404@2|Bacteria,4NF1M@976|Bacteroidetes,1INME@117747|Sphingobacteriia	976|Bacteroidetes	O	Peptidase S8 and S53 subtilisin kexin sedolisin	wprA	-	-	-	-	-	-	-	-	-	-	-	Peptidase_S8
BYD3_k127_2358006_0	1122176.KB903542_gene319	4.519e-124	404.0	COG1162@1|root,COG1162@2|Bacteria,4NE5H@976|Bacteroidetes,1IQE6@117747|Sphingobacteriia	976|Bacteroidetes	S	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit	rsgA	-	3.1.3.100	ko:K06949	ko00730,ko01100,map00730,map01100	-	R00615,R02135	RC00002,RC00017	ko00000,ko00001,ko01000,ko03009	-	-	-	RsgA_GTPase,RsgA_N
BYD3_k127_2358006_1	313606.M23134_06584	8.101e-91	310.0	COG1647@1|root,COG1647@2|Bacteria,4NHPY@976|Bacteroidetes,47JR1@768503|Cytophagia	976|Bacteroidetes	E	Alpha/beta hydrolase family	-	-	-	-	-	-	-	-	-	-	-	-	Abhydrolase_1,Abhydrolase_6,BAAT_C,Hydrolase_4
BYD3_k127_2358006_2	760192.Halhy_3338	1.723e-40	161.0	COG1577@1|root,COG1577@2|Bacteria,4NDYJ@976|Bacteroidetes	976|Bacteroidetes	I	mevalonate kinase	mvaK	-	2.7.1.36	ko:K00869	ko00900,ko01100,ko01110,ko01130,ko04146,map00900,map01100,map01110,map01130,map04146	M00095	R02245	RC00002,RC00017	ko00000,ko00001,ko00002,ko01000	-	-	-	GHMP_kinases_C,GHMP_kinases_N
BYD3_k127_2358006_3	679937.Bcop_0602	1.978e-28	120.0	COG2137@1|root,COG2137@2|Bacteria,4NSAS@976|Bacteroidetes,2FS4X@200643|Bacteroidia,4AQV1@815|Bacteroidaceae	976|Bacteroidetes	S	Modulates RecA activity	recX	-	-	ko:K03565	-	-	-	-	ko00000,ko03400	-	-	-	RecX
BYD3_k127_2358006_4	926549.KI421517_gene398	3.174e-21	94.0	COG0596@1|root,COG0596@2|Bacteria,4NDZI@976|Bacteroidetes,47JB4@768503|Cytophagia	976|Bacteroidetes	S	Serine aminopeptidase, S33	ybfF	-	-	-	-	-	-	-	-	-	-	-	Abhydrolase_1
BYD3_k127_2372125_3	1122176.KB903569_gene3479	1.206e-10	70.0	COG2931@1|root,COG3210@1|root,COG2931@2|Bacteria,COG3210@2|Bacteria,4NIKN@976|Bacteroidetes	976|Bacteroidetes	Q	Animal haem peroxidase	-	-	-	-	-	-	-	-	-	-	-	-	An_peroxidase
BYD3_k127_2372125_2	1168289.AJKI01000002_gene2255	2.068e-21	102.0	28PR3@1|root,2ZCD0@2|Bacteria,4NMAF@976|Bacteroidetes,2FTY0@200643|Bacteroidia,3XK1I@558415|Marinilabiliaceae	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_2372125_1	1313301.AUGC01000007_gene527	3.582e-83	286.0	COG1475@1|root,COG1475@2|Bacteria,4NFZ9@976|Bacteroidetes	976|Bacteroidetes	K	Belongs to the ParB family	parB	-	-	ko:K03497	-	-	-	-	ko00000,ko03000,ko03036,ko04812	-	-	-	ParBc
BYD3_k127_2372125_0	1122176.KB903531_gene2835	1.507e-99	331.0	COG1192@1|root,COG1192@2|Bacteria,4NFEX@976|Bacteroidetes,1IQ5V@117747|Sphingobacteriia	976|Bacteroidetes	D	CobQ CobB MinD ParA nucleotide binding domain	soj	-	-	ko:K03496	-	-	-	-	ko00000,ko03036,ko04812	-	-	-	AAA_31
BYD3_k127_2373833_0	700598.Niako_4449	1.421e-203	639.0	COG0308@1|root,COG0308@2|Bacteria,4NE13@976|Bacteroidetes,1IWX4@117747|Sphingobacteriia	976|Bacteroidetes	E	Peptidase family M1 domain	-	-	-	-	-	-	-	-	-	-	-	-	Peptidase_M1
BYD3_k127_2373833_1	1123248.KB893318_gene4103	3.059e-66	231.0	COG0308@1|root,COG0308@2|Bacteria,4NE13@976|Bacteroidetes,1IRI8@117747|Sphingobacteriia	976|Bacteroidetes	E	COG0308 Aminopeptidase N	-	-	-	-	-	-	-	-	-	-	-	-	Peptidase_M1
BYD3_k127_2377169_3	700598.Niako_2129	4.222e-53	191.0	COG2066@1|root,COG2066@2|Bacteria,4NERJ@976|Bacteroidetes,1ISZR@117747|Sphingobacteriia	976|Bacteroidetes	E	Belongs to the glutaminase family	glsA	GO:0003674,GO:0003824,GO:0004359,GO:0006082,GO:0006520,GO:0006536,GO:0006537,GO:0006541,GO:0006543,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009056,GO:0009058,GO:0009063,GO:0009064,GO:0009065,GO:0009084,GO:0009987,GO:0016053,GO:0016054,GO:0016787,GO:0016810,GO:0016811,GO:0019752,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044281,GO:0044282,GO:0044283,GO:0046394,GO:0046395,GO:0071704,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576,GO:1901605,GO:1901606,GO:1901607	3.5.1.2	ko:K01425	ko00220,ko00250,ko00471,ko01100,ko04724,ko04727,ko04964,ko05206,ko05230,map00220,map00250,map00471,map01100,map04724,map04727,map04964,map05206,map05230	-	R00256,R01579	RC00010,RC02798	ko00000,ko00001,ko01000	-	-	-	Glutaminase
BYD3_k127_2377169_1	1341181.FLJC2902T_15880	5.541e-163	521.0	COG2911@1|root,COG2911@2|Bacteria,4NHAF@976|Bacteroidetes,1I5BI@117743|Flavobacteriia,2NVIG@237|Flavobacterium	976|Bacteroidetes	S	COG NOG10142 non supervised orthologous group	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_2377169_0	1123248.KB893324_gene1697	3.462e-184	584.0	COG0446@1|root,COG0446@2|Bacteria,4NEK6@976|Bacteroidetes,1IUWR@117747|Sphingobacteriia	976|Bacteroidetes	S	Pyridine nucleotide-disulphide oxidoreductase	-	-	1.8.5.4	ko:K17218	ko00920,map00920	-	R10152	RC03155	ko00000,ko00001,ko01000	-	-	-	Pyr_redox_2
BYD3_k127_2377169_2	743722.Sph21_3307	2.575e-66	227.0	COG0367@1|root,COG0367@2|Bacteria,4NFQ3@976|Bacteroidetes,1IR5W@117747|Sphingobacteriia	976|Bacteroidetes	E	asparagine synthase	asnB	-	6.3.5.4	ko:K01953	ko00250,ko01100,ko01110,map00250,map01100,map01110	-	R00578	RC00010	ko00000,ko00001,ko01000,ko01002	-	-	-	Asn_synthase,GATase_7
BYD3_k127_2380865_2	1279009.ADICEAN_01033	1.719e-31	126.0	COG0508@1|root,COG0508@2|Bacteria,4NJ7Y@976|Bacteroidetes,47P7H@768503|Cytophagia	976|Bacteroidetes	C	dehydrogenase complex catalyzes the overall conversion of	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_2380865_1	762903.Pedsa_1924	7.826e-131	431.0	COG0285@1|root,COG0285@2|Bacteria,4NES8@976|Bacteroidetes,1IQU2@117747|Sphingobacteriia	976|Bacteroidetes	H	Belongs to the folylpolyglutamate synthase family	folC	-	6.3.2.12,6.3.2.17	ko:K11754	ko00790,ko01100,map00790,map01100	M00126,M00841	R00942,R02237,R04241	RC00064,RC00090,RC00162	ko00000,ko00001,ko00002,ko01000	-	-	-	Mur_ligase_M
BYD3_k127_2380865_0	641524.ADICYQ_0679	2.881e-187	599.0	COG2234@1|root,COG2234@2|Bacteria,4NFDJ@976|Bacteroidetes,47KZX@768503|Cytophagia	976|Bacteroidetes	S	PA domain	-	-	-	-	-	-	-	-	-	-	-	-	PA,Peptidase_M28
BYD3_k127_2395489_4	1121889.AUDM01000016_gene2103	1.02e-35	136.0	COG0439@1|root,COG0439@2|Bacteria,4NFEQ@976|Bacteroidetes,1IJW9@117743|Flavobacteriia,2P0SS@237|Flavobacterium	976|Bacteroidetes	I	Biotin carboxylase C-terminal domain	accC	-	6.3.4.14,6.4.1.2,6.4.1.3	ko:K01961,ko:K01965	ko00061,ko00280,ko00620,ko00630,ko00640,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00061,map00280,map00620,map00630,map00640,map00720,map01100,map01110,map01120,map01130,map01200,map01212	M00082,M00373,M00376,M00741	R00742,R01859,R04385	RC00040,RC00097,RC00253,RC00367,RC00609	ko00000,ko00001,ko00002,ko01000	-	-	-	Biotin_carb_C,Biotin_carb_N,CPSase_L_D2
BYD3_k127_2395489_3	1122176.KB903609_gene5133	3.759e-44	164.0	COG4770@1|root,COG4770@2|Bacteria,4NM1W@976|Bacteroidetes,1IPSQ@117747|Sphingobacteriia	976|Bacteroidetes	I	TIGRFAM acetyl-CoA carboxylase, biotin carboxylase	-	-	6.3.4.14,6.4.1.2,6.4.1.3,6.4.1.4	ko:K01961,ko:K01965,ko:K01968	ko00061,ko00280,ko00620,ko00630,ko00640,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00061,map00280,map00620,map00630,map00640,map00720,map01100,map01110,map01120,map01130,map01200,map01212	M00036,M00082,M00373,M00376,M00741	R00742,R01859,R04138,R04385	RC00040,RC00097,RC00253,RC00367,RC00609,RC00942	ko00000,ko00001,ko00002,ko01000	-	-	-	Biotin_carb_C,Biotin_carb_N,CPSase_L_D2
BYD3_k127_2395489_0	1123277.KB893177_gene3543	4.243e-167	558.0	COG2133@1|root,COG2133@2|Bacteria,4NIJA@976|Bacteroidetes,47NB2@768503|Cytophagia	976|Bacteroidetes	G	Glucose / Sorbosone dehydrogenase	-	-	-	-	-	-	-	-	-	-	-	-	CBM_6,GSDH,Ig_3,PA14
BYD3_k127_2395489_2	1122176.KB903619_gene5405	4.551e-67	238.0	COG2932@1|root,COG2932@2|Bacteria,4NDUW@976|Bacteroidetes,1IQ7T@117747|Sphingobacteriia	976|Bacteroidetes	K	transcriptional regulator	-	-	-	-	-	-	-	-	-	-	-	-	HTH_19,HTH_3,Peptidase_S24
BYD3_k127_2395489_1	671143.DAMO_2383	1.486e-124	404.0	COG0719@1|root,COG0719@2|Bacteria,2NNKT@2323|unclassified Bacteria	2|Bacteria	O	FeS assembly protein SufB	sufB	GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006790,GO:0008150,GO:0008152,GO:0009536,GO:0009842,GO:0009987,GO:0016043,GO:0016226,GO:0022607,GO:0031163,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044085,GO:0044237,GO:0044424,GO:0044444,GO:0044464,GO:0048037,GO:0051186,GO:0051536,GO:0051537,GO:0051539,GO:0051540,GO:0071840	-	ko:K07033,ko:K09014	-	-	-	-	ko00000	-	-	iAPECO1_1312.APECO1_760,iECH74115_1262.ECH74115_2397,iECSF_1327.ECSF_1543,iECSP_1301.ECSP_2250,iUTI89_1310.UTI89_C1875,ic_1306.c2078	UPF0051
BYD3_k127_2407301_0	1267533.KB906737_gene1782	1.57e-179	567.0	COG3119@1|root,COG3119@2|Bacteria,3Y3PF@57723|Acidobacteria	57723|Acidobacteria	P	PFAM Sulfatase	-	-	3.1.6.1	ko:K01130	ko00140,ko00600,map00140,map00600	-	R03980,R04856	RC00128,RC00231	ko00000,ko00001,ko01000	-	-	-	Sulfatase
BYD3_k127_2422315_0	1107311.Q767_00270	2.603e-83	278.0	COG0346@1|root,COG0346@2|Bacteria,4NMH9@976|Bacteroidetes,1INB3@117743|Flavobacteriia,2NYWF@237|Flavobacterium	976|Bacteroidetes	E	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily	-	-	-	-	-	-	-	-	-	-	-	-	Glyoxalase_4
BYD3_k127_2422315_3	318167.Sfri_2446	3.701e-18	92.0	2ASWM@1|root,31IC3@2|Bacteria,1N1F9@1224|Proteobacteria,1S798@1236|Gammaproteobacteria,2QBMF@267890|Shewanellaceae	1236|Gammaproteobacteria	S	Protein of unknown function (DUF3010)	SO2839	-	-	-	-	-	-	-	-	-	-	-	DUF3010
BYD3_k127_2422315_1	1341155.FSS13T_18910	2.312e-48	177.0	2AYP4@1|root,31QTN@2|Bacteria,4PDG2@976|Bacteroidetes,1INFK@117743|Flavobacteriia,2NZFY@237|Flavobacterium	976|Bacteroidetes	S	Immunoglobulin-like domain of bacterial spore germination	-	-	-	-	-	-	-	-	-	-	-	-	Gmad2
BYD3_k127_2422315_2	247490.KSU1_C0844	6.827e-19	101.0	COG4409@1|root,COG4409@2|Bacteria	2|Bacteria	G	exo-alpha-(2->6)-sialidase activity	-	-	-	-	-	-	-	-	-	-	-	-	ASH,BNR_2,CBM_35,DUF1080,PKD
BYD3_k127_2427958_0	1123278.KB893564_gene2580	1.699e-145	469.0	COG0477@1|root,COG2814@2|Bacteria,4NEZT@976|Bacteroidetes,47M0X@768503|Cytophagia	976|Bacteroidetes	EGP	PFAM Major Facilitator Superfamily	-	-	-	-	-	-	-	-	-	-	-	-	MFS_1
BYD3_k127_2427958_2	641524.ADICYQ_0149	8.007e-98	329.0	COG0598@1|root,COG0598@2|Bacteria,4NG3C@976|Bacteroidetes,47MPJ@768503|Cytophagia	976|Bacteroidetes	P	CorA-like Mg2+ transporter protein	corA	-	-	ko:K03284	-	-	-	-	ko00000,ko02000	1.A.35.1,1.A.35.3	-	-	CorA
BYD3_k127_2427958_1	1123278.KB893389_gene4233	4.016e-125	406.0	COG2819@1|root,COG2819@2|Bacteria,4NGAG@976|Bacteroidetes,47N0B@768503|Cytophagia	976|Bacteroidetes	S	Putative esterase	-	-	-	ko:K07017	-	-	-	-	ko00000	-	-	-	Esterase
BYD3_k127_2432395_0	240016.ABIZ01000001_gene111	2.434e-99	336.0	COG0673@1|root,COG0673@2|Bacteria,46UQX@74201|Verrucomicrobia,2IW4Z@203494|Verrucomicrobiae	203494|Verrucomicrobiae	H	Oxidoreductase family, NAD-binding Rossmann fold	-	-	2.7.7.15	ko:K00968	ko00440,ko00564,ko01100,ko05231,map00440,map00564,map01100,map05231	M00090	R01890,R02590	RC00002	ko00000,ko00001,ko00002,ko01000	-	-	-	GFO_IDH_MocA,GFO_IDH_MocA_C
BYD3_k127_2432395_2	1492738.FEM21_04920	1.163e-12	69.0	2DS2Y@1|root,33E9X@2|Bacteria,4NY47@976|Bacteroidetes,1IN5B@117743|Flavobacteriia,2NXVX@237|Flavobacterium	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_2432395_1	927658.AJUM01000047_gene2873	8.676e-15	75.0	COG0793@1|root,COG4946@1|root,COG0793@2|Bacteria,COG4946@2|Bacteria,4NGU2@976|Bacteroidetes,2FPGA@200643|Bacteroidia,3XIM1@558415|Marinilabiliaceae	976|Bacteroidetes	M	Tricorn protease C1 domain	-	-	-	ko:K08676	-	-	-	-	ko00000,ko01000,ko01002	-	-	-	PD40,Peptidase_S41,Tricorn_C1,Tricorn_PDZ
BYD3_k127_2438793_0	1004149.AFOE01000050_gene2656	3.056e-254	798.0	COG0296@1|root,COG0296@2|Bacteria,4NECZ@976|Bacteroidetes,1HXCC@117743|Flavobacteriia	976|Bacteroidetes	G	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position	glgB	-	2.4.1.18	ko:K00700	ko00500,ko01100,ko01110,map00500,map01100,map01110	M00565	R02110	-	ko00000,ko00001,ko00002,ko01000,ko04147	-	CBM48,GH13	-	Alpha-amylase,Alpha-amylase_C,CBM_48
BYD3_k127_2438793_1	153721.MYP_1853	3.152e-213	700.0	COG0210@1|root,COG2887@1|root,COG0210@2|Bacteria,COG2887@2|Bacteria,4NIIR@976|Bacteroidetes,47UJ0@768503|Cytophagia	976|Bacteroidetes	L	Exodeoxyribonuclease V, gamma subunit	-	-	3.6.4.12	ko:K03657	ko03420,ko03430,map03420,map03430	-	-	-	ko00000,ko00001,ko01000,ko03400	-	-	-	PDDEXK_1,UvrD-helicase,UvrD_C
BYD3_k127_2438793_3	760192.Halhy_2034	8.405e-41	166.0	COG3307@1|root,COG3307@2|Bacteria,4NU0S@976|Bacteroidetes,1IUM4@117747|Sphingobacteriia	976|Bacteroidetes	M	O-antigen ligase like membrane protein	-	-	-	ko:K02847	ko00540,ko01100,map00540,map01100	M00080	-	-	ko00000,ko00001,ko00002,ko01000,ko01005,ko02000	9.B.67.4,9.B.67.5	-	-	Wzy_C
BYD3_k127_2438793_2	760192.Halhy_2035	1.257e-140	454.0	COG0016@1|root,COG0016@2|Bacteria,4NF8I@976|Bacteroidetes,1IPG1@117747|Sphingobacteriia	976|Bacteroidetes	J	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily	pheS	GO:0003674,GO:0003824,GO:0004812,GO:0004826,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006432,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576	6.1.1.20	ko:K01889	ko00970,map00970	M00359,M00360	R03660	RC00055,RC00523	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	-	-	-	Phe_tRNA-synt_N,tRNA-synt_2d
BYD3_k127_2491612_3	118168.MC7420_829	1.183e-10	72.0	COG2114@1|root,COG2203@1|root,COG2114@2|Bacteria,COG2203@2|Bacteria,1G3VK@1117|Cyanobacteria,1HA0X@1150|Oscillatoriales	1117|Cyanobacteria	T	Adenylyl- / guanylyl cyclase, catalytic domain	-	-	4.6.1.1	ko:K01768	ko00230,ko02025,ko04113,ko04213,map00230,map02025,map04113,map04213	M00695	R00089,R00434	RC00295	ko00000,ko00001,ko00002,ko01000	-	-	-	GAF_2,Guanylate_cyc
BYD3_k127_2491612_1	404589.Anae109_2916	5.677e-32	129.0	COG2203@1|root,COG3576@1|root,COG2203@2|Bacteria,COG3576@2|Bacteria,1PKS2@1224|Proteobacteria,42T45@68525|delta/epsilon subdivisions,2WPSR@28221|Deltaproteobacteria	28221|Deltaproteobacteria	T	pyridoxamine 5'-phosphate oxidase-related FMN-binding	-	-	-	ko:K07006	-	-	-	-	ko00000	-	-	-	Putative_PNPOx
BYD3_k127_2491612_5	1144312.PMI09_00115	1.598e-07	59.0	2EH53@1|root,33AX0@2|Bacteria,1NCC5@1224|Proteobacteria,2UFAG@28211|Alphaproteobacteria,4BFBU@82115|Rhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_2491612_2	1189620.AJXL01000002_gene1866	5.34e-24	109.0	COG2032@1|root,COG2032@2|Bacteria,4NGGW@976|Bacteroidetes,1HY8P@117743|Flavobacteriia,2NYDV@237|Flavobacterium	976|Bacteroidetes	P	superoxide dismutase activity	-	-	-	-	-	-	-	-	-	-	-	-	CHRD
BYD3_k127_2491612_0	531844.FIC_01690	1.544e-149	481.0	COG2141@1|root,COG2141@2|Bacteria,4NHGI@976|Bacteroidetes,1HYI8@117743|Flavobacteriia	976|Bacteroidetes	C	luciferase	yhbW	-	-	-	-	-	-	-	-	-	-	-	Bac_luciferase
BYD3_k127_2491612_4	880071.Fleli_1219	6.702e-08	61.0	COG3291@1|root,COG4447@1|root,COG3291@2|Bacteria,COG4447@2|Bacteria,4PNPQ@976|Bacteroidetes,47YDQ@768503|Cytophagia	976|Bacteroidetes	S	cellulose binding	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_2504092_3	760192.Halhy_0418	1.814e-60	211.0	COG0183@1|root,COG0183@2|Bacteria,4NE3Q@976|Bacteroidetes,1IP5F@117747|Sphingobacteriia	976|Bacteroidetes	I	Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation	atoB	-	2.3.1.9	ko:K00626	ko00071,ko00072,ko00280,ko00310,ko00362,ko00380,ko00620,ko00630,ko00640,ko00650,ko00720,ko00900,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,ko02020,map00071,map00072,map00280,map00310,map00362,map00380,map00620,map00630,map00640,map00650,map00720,map00900,map01100,map01110,map01120,map01130,map01200,map01212,map02020	M00088,M00095,M00373,M00374,M00375	R00238,R01177	RC00004,RC00326	ko00000,ko00001,ko00002,ko01000,ko04147	-	-	-	Thiolase_C,Thiolase_N
BYD3_k127_2504092_4	242619.PG_1249	2.894e-15	85.0	COG0204@1|root,COG0204@2|Bacteria,4NG5R@976|Bacteroidetes,2FMJG@200643|Bacteroidia,22XRW@171551|Porphyromonadaceae	976|Bacteroidetes	I	Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family	plsC	-	2.3.1.51	ko:K00655	ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110	M00089	R02241,R09381	RC00004,RC00037,RC00039	ko00000,ko00001,ko00002,ko01000,ko01004	-	-	-	Acyltransferase
BYD3_k127_2504092_5	319225.Plut_1185	4.699e-09	59.0	COG3876@1|root,COG3876@2|Bacteria,1FDF0@1090|Chlorobi	1090|Chlorobi	S	PFAM conserved	-	-	-	-	-	-	-	-	-	-	-	-	DUF1343
BYD3_k127_2504092_1	485917.Phep_1550	3.266e-213	689.0	COG1198@1|root,COG1198@2|Bacteria,4NFHB@976|Bacteroidetes,1IQGH@117747|Sphingobacteriia	976|Bacteroidetes	L	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA	priA	-	-	ko:K04066	ko03440,map03440	-	-	-	ko00000,ko00001,ko01000,ko03400	-	-	-	DEAD,Helicase_C,ResIII
BYD3_k127_2504092_0	1121904.ARBP01000007_gene2960	2.231e-261	813.0	COG1190@1|root,COG1190@2|Bacteria,4NDZN@976|Bacteroidetes,47M2W@768503|Cytophagia	976|Bacteroidetes	J	Belongs to the class-II aminoacyl-tRNA synthetase family	lysS	-	6.1.1.6	ko:K04567	ko00970,map00970	M00359,M00360	R03658	RC00055,RC00523	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	-	-	-	DUF4332,tRNA-synt_2,tRNA_anti-codon
BYD3_k127_2504092_2	760192.Halhy_4553	3.318e-61	215.0	COG0688@1|root,COG0688@2|Bacteria,4NFU1@976|Bacteroidetes,1INZC@117747|Sphingobacteriia	976|Bacteroidetes	I	Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer)	psd	-	4.1.1.65	ko:K01613	ko00564,ko01100,ko01110,map00564,map01100,map01110	M00093	R02055	RC00299	ko00000,ko00001,ko00002,ko01000	-	-	-	PS_Dcarbxylase
BYD3_k127_257903_2	1120966.AUBU01000003_gene1733	2.201e-67	237.0	COG3279@1|root,COG3279@2|Bacteria,4NFPV@976|Bacteroidetes,47PTI@768503|Cytophagia	976|Bacteroidetes	T	Response regulator of the LytR AlgR family	-	-	-	ko:K02477	-	-	-	-	ko00000,ko02022	-	-	-	LytTR,Response_reg
BYD3_k127_257903_0	1121890.AUDO01000009_gene129	1.079e-83	288.0	COG0697@1|root,COG0697@2|Bacteria,4NK8U@976|Bacteroidetes,1I01E@117743|Flavobacteriia,2NV5M@237|Flavobacterium	976|Bacteroidetes	EG	drug metabolite-transporting permease	-	-	-	-	-	-	-	-	-	-	-	-	EamA
BYD3_k127_257903_1	391603.FBALC1_09722	4.824e-77	273.0	COG1988@1|root,COG1988@2|Bacteria,4NFBT@976|Bacteroidetes,1HY38@117743|Flavobacteriia	976|Bacteroidetes	S	membrane-bound metal-dependent	-	-	-	ko:K07038	-	-	-	-	ko00000	-	-	-	YdjM
BYD3_k127_2580302_5	1123234.AUKI01000004_gene31	4.982e-77	266.0	COG1235@1|root,COG1235@2|Bacteria,4NDWB@976|Bacteroidetes,1HX58@117743|Flavobacteriia	976|Bacteroidetes	S	of the beta-lactamase superfamily I	phnP	-	3.1.4.55	ko:K06167	ko00440,map00440	-	R10205	RC00296	ko00000,ko00001,ko01000	-	-	-	Lactamase_B_2
BYD3_k127_2580302_6	1122176.KB903541_gene246	2.636e-53	200.0	COG3064@1|root,COG3064@2|Bacteria,4NEVD@976|Bacteroidetes,1IP9M@117747|Sphingobacteriia	976|Bacteroidetes	M	Type IX secretion system membrane protein PorP/SprF	-	-	-	-	-	-	-	-	-	-	-	-	PorP_SprF
BYD3_k127_2580302_0	1122176.KB903541_gene247	8.548e-198	623.0	COG1262@1|root,COG1262@2|Bacteria,4NGY2@976|Bacteroidetes,1IP8A@117747|Sphingobacteriia	976|Bacteroidetes	S	PFAM Formylglycine-generating sulfatase enzyme	gldK	-	-	-	-	-	-	-	-	-	-	-	FGE-sulfatase
BYD3_k127_2580302_7	760192.Halhy_1449	1.461e-51	191.0	28IG3@1|root,2Z8HM@2|Bacteria,4NFJR@976|Bacteroidetes,1ISRG@117747|Sphingobacteriia	976|Bacteroidetes	S	TIGRFAM gliding motility-associated protein GldL	gldL	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_2580302_2	760192.Halhy_1448	7.283e-127	423.0	COG4219@1|root,COG4219@2|Bacteria,4PKZS@976|Bacteroidetes,1IR4A@117747|Sphingobacteriia	976|Bacteroidetes	KT	Gliding motility-associated protein GldM	gldM	-	-	-	-	-	-	-	-	-	-	-	GldM_C,GldM_N
BYD3_k127_2580302_4	1122176.KB903541_gene250	3.7e-87	296.0	28H74@1|root,2Z7JF@2|Bacteria,4NFR0@976|Bacteroidetes,1IQ08@117747|Sphingobacteriia	976|Bacteroidetes	S	TIGRFAM gliding motility associated	gldN	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_2580302_1	1122176.KB903537_gene1677	6.257e-177	567.0	COG1215@1|root,COG1215@2|Bacteria,4NEK9@976|Bacteroidetes,1IUAV@117747|Sphingobacteriia	976|Bacteroidetes	M	Glycosyl transferase family 21	-	-	-	-	-	-	-	-	-	-	-	-	Glyco_tranf_2_3,Glycos_transf_2
BYD3_k127_2580302_3	760192.Halhy_1718	5.207e-116	391.0	2DB82@1|root,2Z7PX@2|Bacteria,4NEW5@976|Bacteroidetes,1ISIT@117747|Sphingobacteriia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	Beta_helix
BYD3_k127_2585495_2	760192.Halhy_2687	5.588e-41	155.0	COG2010@1|root,COG2010@2|Bacteria,4NHQV@976|Bacteroidetes,1IRAZ@117747|Sphingobacteriia	976|Bacteroidetes	C	Cytochrome c	-	-	-	-	-	-	-	-	-	-	-	-	Cytochrom_C
BYD3_k127_2585495_0	985255.APHJ01000025_gene1087	1.212e-128	420.0	COG0226@1|root,COG0226@2|Bacteria,4NH1G@976|Bacteroidetes,1IIZQ@117743|Flavobacteriia,2P7G8@244698|Gillisia	976|Bacteroidetes	P	PBP superfamily domain	pstS	-	-	ko:K02040	ko02010,ko02020,ko05152,map02010,map02020,map05152	M00222	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.7	-	-	PBP_like,PBP_like_2
BYD3_k127_2585495_1	468059.AUHA01000002_gene577	2.743e-110	361.0	COG0573@1|root,COG0573@2|Bacteria,4NFDD@976|Bacteroidetes,1IPVZ@117747|Sphingobacteriia	976|Bacteroidetes	P	probably responsible for the translocation of the substrate across the membrane	pstC	-	-	ko:K02037	ko02010,map02010	M00222	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.7	-	-	BPD_transp_1
BYD3_k127_2596235_1	1124780.ANNU01000030_gene1122	3.297e-66	231.0	COG2273@1|root,COG2273@2|Bacteria,4NHP5@976|Bacteroidetes,47JXY@768503|Cytophagia	976|Bacteroidetes	G	Glycoside hydrolase family 16	bglA	-	3.2.1.73	ko:K01216	-	-	-	-	ko00000,ko01000	-	-	-	GDPD,Glyco_hydro_16
BYD3_k127_2596235_2	1122621.ATZA01000001_gene1915	5.433e-08	63.0	COG3291@1|root,COG3291@2|Bacteria	2|Bacteria	S	metallopeptidase activity	-	-	3.4.24.3	ko:K01387	-	-	-	-	ko00000,ko01000,ko01002,ko02042	-	-	-	CHU_C,DUF11,LRR_5,PKD,PPC,Peptidase_M9,Peptidase_M9_N,UnbV_ASPIC,VCBS
BYD3_k127_2596235_0	153721.MYP_2457	1.451e-102	352.0	COG0702@1|root,COG0702@2|Bacteria,4PKHQ@976|Bacteroidetes,47XXB@768503|Cytophagia	976|Bacteroidetes	GM	SusD family	-	-	-	ko:K21572	-	-	-	-	ko00000,ko02000	8.A.46.1,8.A.46.3	-	-	SusD-like_3,SusD_RagB
BYD3_k127_2599447_0	760192.Halhy_1857	1.61e-97	337.0	COG1674@1|root,COG1674@2|Bacteria,4NE86@976|Bacteroidetes,1INVI@117747|Sphingobacteriia	976|Bacteroidetes	D	DNA segregation ATPase FtsK SpoIIIE and related	ftsK	-	-	ko:K03466	-	-	-	-	ko00000,ko03036	3.A.12	-	-	FtsK_4TM,FtsK_SpoIIIE,Ftsk_gamma
BYD3_k127_2599447_1	616991.JPOO01000003_gene794	4.959e-93	315.0	COG1748@1|root,COG1748@2|Bacteria,4PDGG@976|Bacteroidetes,1I0IM@117743|Flavobacteriia,23GWQ@178469|Arenibacter	976|Bacteroidetes	E	Saccharopine dehydrogenase C-terminal domain	-	-	-	-	-	-	-	-	-	-	-	-	Sacchrp_dh_C,Sacchrp_dh_NADP
BYD3_k127_2605404_0	1122176.KB903546_gene992	3.408e-129	427.0	COG0577@1|root,COG0577@2|Bacteria,4NF60@976|Bacteroidetes,1J0VQ@117747|Sphingobacteriia	976|Bacteroidetes	V	FtsX-like permease family	-	-	-	ko:K02004	-	M00258	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	FtsX,MacB_PCD
BYD3_k127_2605404_2	760192.Halhy_3662	1.375e-62	222.0	COG1136@1|root,COG1136@2|Bacteria,4NNS2@976|Bacteroidetes,1J088@117747|Sphingobacteriia	976|Bacteroidetes	V	AAA domain, putative AbiEii toxin, Type IV TA system	-	-	-	ko:K02003	-	M00258	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	ABC_tran
BYD3_k127_2605404_1	643867.Ftrac_0487	9.044e-101	333.0	COG1940@1|root,COG1940@2|Bacteria,4NGC1@976|Bacteroidetes,47KEB@768503|Cytophagia	976|Bacteroidetes	GK	PFAM ROK family	-	-	-	-	-	-	-	-	-	-	-	-	ROK
BYD3_k127_2655252_0	269798.CHU_2513	8.45e-185	588.0	COG0841@1|root,COG0841@2|Bacteria,4NDZG@976|Bacteroidetes,47ME1@768503|Cytophagia	976|Bacteroidetes	V	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family	-	-	-	-	-	-	-	-	-	-	-	-	ACR_tran
BYD3_k127_2655252_1	929556.Solca_1726	2.164e-81	285.0	COG0845@1|root,COG0845@2|Bacteria,4NERP@976|Bacteroidetes,1IP8S@117747|Sphingobacteriia	976|Bacteroidetes	M	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family	-	-	-	-	-	-	-	-	-	-	-	-	HlyD_D23
BYD3_k127_2655252_2	1123278.KB893570_gene2462	2.856e-16	85.0	COG1538@1|root,COG1538@2|Bacteria,4NF4X@976|Bacteroidetes,47KE9@768503|Cytophagia	976|Bacteroidetes	MU	PFAM Outer membrane efflux protein	-	-	-	-	-	-	-	-	-	-	-	-	OEP
BYD3_k127_2703174_0	483219.LILAB_28760	2.784e-36	146.0	COG4932@1|root,COG4932@2|Bacteria,1QUEG@1224|Proteobacteria,43CJR@68525|delta/epsilon subdivisions,2X7U3@28221|Deltaproteobacteria,2Z3HT@29|Myxococcales	28221|Deltaproteobacteria	M	domain protein	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_2703174_1	1408813.AYMG01000009_gene3137	5.153e-24	104.0	2C8HS@1|root,3332Q@2|Bacteria,4P77Z@976|Bacteroidetes,1J00U@117747|Sphingobacteriia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_2709913_1	1237149.C900_01721	1.506e-69	249.0	COG2377@1|root,COG2377@2|Bacteria,4NFZU@976|Bacteroidetes,47NI9@768503|Cytophagia	976|Bacteroidetes	O	Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling	anmK	-	2.7.1.170	ko:K09001	-	-	-	-	ko00000,ko01000	-	-	-	AnmK
BYD3_k127_2709913_2	1122176.KB903565_gene3361	5.113e-59	216.0	COG0451@1|root,COG0451@2|Bacteria,4NFZH@976|Bacteroidetes,1IQ5S@117747|Sphingobacteriia	976|Bacteroidetes	M	NAD dependent epimerase dehydratase family	-	-	1.1.1.219	ko:K00091	-	-	-	-	ko00000,ko01000	-	-	-	Epimerase,NAD_binding_4
BYD3_k127_2709913_0	1158294.JOMI01000004_gene3359	3.044e-80	285.0	COG0741@1|root,COG1388@1|root,COG0741@2|Bacteria,COG1388@2|Bacteria,4NEKW@976|Bacteroidetes,2FM5V@200643|Bacteroidia	976|Bacteroidetes	M	Transglycosylase SLT domain	mltD	-	-	ko:K08307	-	-	-	-	ko00000,ko01000,ko01011	-	-	-	LysM,SLT
BYD3_k127_2742654_4	700598.Niako_2122	4.44e-47	171.0	COG3746@1|root,COG3746@2|Bacteria	2|Bacteria	-	-	-	-	-	ko:K07221	-	-	-	-	ko00000,ko02000	1.B.5.1	-	-	Porin_O_P
BYD3_k127_2742654_0	1341181.FLJC2902T_15860	6.659e-248	771.0	COG1027@1|root,COG1027@2|Bacteria,4P1PR@976|Bacteroidetes,1HZDD@117743|Flavobacteriia,2NU65@237|Flavobacterium	976|Bacteroidetes	E	Fumarase C C-terminus	-	-	4.3.1.1	ko:K01744	ko00250,ko01100,map00250,map01100	-	R00490	RC00316,RC02799	ko00000,ko00001,ko01000	-	-	-	FumaraseC_C,Lyase_1
BYD3_k127_2742654_1	1506583.JQJY01000001_gene551	5.486e-125	409.0	COG0252@1|root,COG0252@2|Bacteria,4NFKG@976|Bacteroidetes,1I02F@117743|Flavobacteriia,2NUFC@237|Flavobacterium	976|Bacteroidetes	EJ	Belongs to the asparaginase 1 family	ansB	-	3.5.1.1	ko:K01424	ko00250,ko00460,ko01100,ko01110,map00250,map00460,map01100,map01110	-	R00485	RC00010,RC02798	ko00000,ko00001,ko01000	-	-	-	Asparaginase
BYD3_k127_2742654_2	1492738.FEM21_28460	2.314e-84	286.0	COG2120@1|root,COG2120@2|Bacteria,4NEDJ@976|Bacteroidetes,1HWWB@117743|Flavobacteriia,2NSSS@237|Flavobacterium	976|Bacteroidetes	S	GlcNAc-PI de-N-acetylase	bshB1	-	-	ko:K01463	-	-	-	-	ko00000,ko01000	-	-	-	PIG-L
BYD3_k127_2742654_3	1122176.KB903554_gene4010	1.799e-58	205.0	COG0332@1|root,COG0332@2|Bacteria,4NFIN@976|Bacteroidetes,1IRA1@117747|Sphingobacteriia	976|Bacteroidetes	I	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids	fabH	-	2.3.1.180	ko:K00648	ko00061,ko01100,ko01212,map00061,map01100,map01212	M00082,M00083	R10707	RC00004,RC02729,RC02888	ko00000,ko00001,ko00002,ko01000,ko01004	-	-	-	ACP_syn_III,ACP_syn_III_C
BYD3_k127_2756503_7	700598.Niako_6202	4.973e-34	132.0	COG2050@1|root,COG2050@2|Bacteria,4NM7W@976|Bacteroidetes,1IYJ0@117747|Sphingobacteriia	976|Bacteroidetes	Q	Thioesterase superfamily	paaI	-	-	ko:K02614	ko00360,map00360	-	R09840	RC00004,RC00014	ko00000,ko00001,ko01000	-	-	-	4HBT
BYD3_k127_2756503_6	1122176.KB903561_gene3586	9.382e-43	163.0	COG2353@1|root,COG2353@2|Bacteria,4NI82@976|Bacteroidetes,1IXPV@117747|Sphingobacteriia	976|Bacteroidetes	S	YceI-like domain	-	-	-	-	-	-	-	-	-	-	-	-	YceI
BYD3_k127_2756503_2	1122176.KB903561_gene3587	6.806e-137	471.0	COG2972@1|root,COG3292@1|root,COG2972@2|Bacteria,COG3292@2|Bacteria,4NJMF@976|Bacteroidetes,1IWR7@117747|Sphingobacteriia	976|Bacteroidetes	T	Y_Y_Y domain	-	-	-	-	-	-	-	-	-	-	-	-	His_kinase,Reg_prop,Y_Y_Y
BYD3_k127_2756503_4	1122176.KB903561_gene3588	2.539e-72	251.0	COG3279@1|root,COG3279@2|Bacteria,4NGBF@976|Bacteroidetes,1ISF2@117747|Sphingobacteriia	976|Bacteroidetes	T	Response regulator receiver domain	-	-	-	-	-	-	-	-	-	-	-	-	LytTR,Response_reg
BYD3_k127_2756503_8	1122176.KB903561_gene3590	9.389e-26	110.0	COG2010@1|root,COG2010@2|Bacteria	2|Bacteria	C	Cytochrome c	-	-	-	-	-	-	-	-	-	-	-	-	Cytochrome_CBB3,PSCyt1
BYD3_k127_2756503_5	1122176.KB903561_gene3592	1.463e-49	182.0	COG2353@1|root,COG2353@2|Bacteria,4NSJH@976|Bacteroidetes,1IY6E@117747|Sphingobacteriia	976|Bacteroidetes	S	PFAM Lipid polyisoprenoid-binding, YceI-like	-	-	-	-	-	-	-	-	-	-	-	-	YceI
BYD3_k127_2756503_3	1122176.KB903561_gene3593	8.024e-118	385.0	COG3637@1|root,COG3637@2|Bacteria,4NE33@976|Bacteroidetes,1IXJN@117747|Sphingobacteriia	976|Bacteroidetes	M	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_2756503_0	1122176.KB903570_gene4799	9.796e-212	689.0	COG3227@1|root,COG4935@1|root,COG3227@2|Bacteria,COG4935@2|Bacteria,4PPGZ@976|Bacteroidetes	976|Bacteroidetes	O	Metallo-peptidase family M12	-	-	-	-	-	-	-	-	-	-	-	-	CUB,Reprolysin_5
BYD3_k127_2756503_1	1122176.KB903570_gene4799	6.789e-195	634.0	COG3227@1|root,COG4935@1|root,COG3227@2|Bacteria,COG4935@2|Bacteria,4PPGZ@976|Bacteroidetes	976|Bacteroidetes	O	Metallo-peptidase family M12	-	-	-	-	-	-	-	-	-	-	-	-	CUB,Reprolysin_5
BYD3_k127_276367_0	1121957.ATVL01000011_gene3939	3.236e-62	230.0	COG4447@1|root,COG4447@2|Bacteria,4NEJ8@976|Bacteroidetes	976|Bacteroidetes	O	M6 family metalloprotease domain protein	-	-	-	-	-	-	-	-	-	-	-	-	DUF11,PKD
BYD3_k127_276367_1	1122176.KB903540_gene107	8.207e-51	188.0	COG0421@1|root,COG0421@2|Bacteria,4NPK5@976|Bacteroidetes	976|Bacteroidetes	E	Spermidine synthase	speE	-	2.5.1.16	ko:K00797	ko00270,ko00330,ko00410,ko00480,ko01100,map00270,map00330,map00410,map00480,map01100	M00034,M00133	R01920,R02869,R08359	RC00021,RC00053	ko00000,ko00001,ko00002,ko01000	-	-	-	Spermine_synth
BYD3_k127_279313_0	1121957.ATVL01000008_gene4646	1.669e-111	396.0	COG3292@1|root,COG4585@1|root,COG3292@2|Bacteria,COG4585@2|Bacteria,4NK8Q@976|Bacteroidetes,47KVN@768503|Cytophagia	976|Bacteroidetes	T	Two component regulator propeller	-	-	-	-	-	-	-	-	-	-	-	-	HATPase_c,HisKA_3,Reg_prop,Y_Y_Y
BYD3_k127_279313_1	1233950.IW22_09695	9.357e-67	233.0	COG2197@1|root,COG2197@2|Bacteria,4NHTM@976|Bacteroidetes,1HXC7@117743|Flavobacteriia,3ZUAM@59732|Chryseobacterium	976|Bacteroidetes	T	helix_turn_helix, Lux Regulon	-	-	-	-	-	-	-	-	-	-	-	-	GerE,Response_reg
BYD3_k127_279313_2	945713.IALB_0159	6.699e-21	97.0	COG2852@1|root,COG2852@2|Bacteria	2|Bacteria	L	Protein conserved in bacteria	-	-	3.1.21.3	ko:K01153	-	-	-	-	ko00000,ko01000,ko02048	-	-	-	DUF3387,DUF559,HSDR_N,ResIII
BYD3_k127_279313_3	378806.STAUR_2857	4.825e-11	72.0	COG5295@1|root,COG5295@2|Bacteria,1NI1M@1224|Proteobacteria,42ZTF@68525|delta/epsilon subdivisions,2WV01@28221|Deltaproteobacteria,2Z2QM@29|Myxococcales	28221|Deltaproteobacteria	UW	Chaperone of endosialidase	-	-	-	-	-	-	-	-	-	-	-	-	Peptidase_S74,YadA_head
BYD3_k127_2801771_1	1237149.C900_01790	7.454e-10	73.0	COG0729@1|root,COG2911@1|root,COG0729@2|Bacteria,COG2911@2|Bacteria	2|Bacteria	S	protein secretion	-	-	-	-	-	-	-	-	-	-	-	-	Bac_surface_Ag,Haemagg_act,Peptidase_S74
BYD3_k127_2801771_2	1144313.PMI10_00484	8.67e-06	60.0	COG1044@1|root,COG5295@1|root,COG1044@2|Bacteria,COG5295@2|Bacteria,4NXF0@976|Bacteroidetes,1I5JQ@117743|Flavobacteriia,2NWKP@237|Flavobacterium	976|Bacteroidetes	M	Hep Hag repeat protein	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_2801771_0	1089547.KB913013_gene3595	2.503e-67	261.0	COG3203@1|root,COG3203@2|Bacteria,4PM6S@976|Bacteroidetes,47Y33@768503|Cytophagia	976|Bacteroidetes	M	FG-GAP repeat	-	-	-	-	-	-	-	-	-	-	-	-	FG-GAP_2
BYD3_k127_2826193_0	1121875.KB907550_gene717	1.357e-123	419.0	COG0457@1|root,COG2114@1|root,COG0457@2|Bacteria,COG2114@2|Bacteria,4NEVN@976|Bacteroidetes,1HYQY@117743|Flavobacteriia	976|Bacteroidetes	T	Belongs to the adenylyl cyclase class-4 guanylyl cyclase family	-	-	4.6.1.1	ko:K01768	ko00230,ko02025,ko04113,ko04213,map00230,map02025,map04113,map04213	M00695	R00089,R00434	RC00295	ko00000,ko00001,ko00002,ko01000	-	-	-	Guanylate_cyc,TPR_12,TPR_8
BYD3_k127_2826193_2	1086011.HJ01_01728	8.087e-59	210.0	2F3HX@1|root,33WBG@2|Bacteria,4P3QP@976|Bacteroidetes	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_2826193_3	468059.AUHA01000006_gene3062	2.852e-46	171.0	2CHCP@1|root,32S5R@2|Bacteria,4NS9G@976|Bacteroidetes	976|Bacteroidetes	S	Domain of unknown function (DU1801)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1801
BYD3_k127_2826193_1	1150600.ADIARSV_0962	3.344e-79	268.0	COG1670@1|root,COG1670@2|Bacteria,4NN0F@976|Bacteroidetes,1IUFM@117747|Sphingobacteriia	976|Bacteroidetes	J	Acetyltransferase (GNAT) domain	-	-	-	-	-	-	-	-	-	-	-	-	Acetyltransf_3
BYD3_k127_2826193_4	1122179.KB890433_gene4055	2.747e-12	70.0	COG3292@1|root,COG3292@2|Bacteria,4NI2T@976|Bacteroidetes,1IPBY@117747|Sphingobacteriia	976|Bacteroidetes	T	Two component regulator propeller	-	-	-	-	-	-	-	-	-	-	-	-	Reg_prop,YceI
BYD3_k127_2832572_0	1122176.KB903556_gene4064	9.079e-81	279.0	COG2988@1|root,COG2988@2|Bacteria,4NHWW@976|Bacteroidetes,1IXX3@117747|Sphingobacteriia	976|Bacteroidetes	E	Succinylglutamate desuccinylase / Aspartoacylase family	astE	-	3.5.1.96	ko:K05526	ko00330,ko01100,map00330,map01100	-	R00411	RC00064,RC00090	ko00000,ko00001,ko01000	-	-	-	AstE_AspA
BYD3_k127_2832572_4	313606.M23134_07049	5.389e-31	143.0	COG3227@1|root,COG3227@2|Bacteria,4NF8H@976|Bacteroidetes	976|Bacteroidetes	E	Thermolysin metallopeptidase, catalytic domain	-	-	-	-	-	-	-	-	-	-	-	-	DUF5011,Inhibitor_I69,MAM,Peptidase_C10,Peptidase_M14,Peptidase_M43,Reprolysin_4,fn3
BYD3_k127_2832572_5	491205.JARQ01000002_gene413	2.357e-22	114.0	COG4412@1|root,COG4886@1|root,COG4412@2|Bacteria,COG4886@2|Bacteria,4PN99@976|Bacteroidetes,1IK1Q@117743|Flavobacteriia,3ZUQM@59732|Chryseobacterium	976|Bacteroidetes	S	M6 family metalloprotease domain protein	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_2832572_1	1121287.AUMU01000001_gene1604	1.479e-69	268.0	COG3023@1|root,COG3292@1|root,COG3023@2|Bacteria,COG3292@2|Bacteria,4NHTI@976|Bacteroidetes,1HZ0K@117743|Flavobacteriia,3ZNHV@59732|Chryseobacterium	976|Bacteroidetes	T	Domain first found in C1r, C1s, uEGF, and bone morphogenetic protein.	-	-	-	-	-	-	-	-	-	-	-	-	CUB,Pep_M12B_propep,Reprolysin_5
BYD3_k127_2832572_3	1121104.AQXH01000001_gene2090	5.376e-44	163.0	COG3324@1|root,COG3324@2|Bacteria,4NSBC@976|Bacteroidetes	976|Bacteroidetes	E	translation initiation factor activity	-	-	-	ko:K06996	-	-	-	-	ko00000	-	-	-	Glyoxalase
BYD3_k127_2832572_2	929556.Solca_4124	3.292e-60	217.0	COG3832@1|root,COG3832@2|Bacteria,4NPKI@976|Bacteroidetes,1IYJ7@117747|Sphingobacteriia	976|Bacteroidetes	S	Activator of Hsp90 ATPase homolog 1-like protein	-	-	-	-	-	-	-	-	-	-	-	-	AHSA1
BYD3_k127_2832572_6	1121373.KB903621_gene1893	1.182e-07	59.0	COG1807@1|root,COG1807@2|Bacteria,4P3UD@976|Bacteroidetes	976|Bacteroidetes	M	4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_2851228_3	865938.Weevi_1874	0.0005953	46.0	COG2273@1|root,COG4733@1|root,COG2273@2|Bacteria,COG4733@2|Bacteria,4PHUU@976|Bacteroidetes,1HZDA@117743|Flavobacteriia	976|Bacteroidetes	G	Alpha integrin	-	-	-	-	-	-	-	-	-	-	-	-	VCBS
BYD3_k127_2851228_2	1341155.FSS13T_27300	2.548e-15	81.0	COG5499@1|root,COG5499@2|Bacteria,4NNXF@976|Bacteroidetes,1I2MM@117743|Flavobacteriia,2NWGM@237|Flavobacterium	976|Bacteroidetes	K	transcription regulator containing HTH domain	-	-	-	ko:K18831	-	-	-	-	ko00000,ko02048,ko03000	-	-	-	HTH_3
BYD3_k127_2851228_1	459495.SPLC1_S203020	1.358e-16	83.0	COG4680@1|root,COG4680@2|Bacteria,1G7FY@1117|Cyanobacteria,1HDAN@1150|Oscillatoriales	1117|Cyanobacteria	S	HigB_toxin, RelE-like toxic component of a toxin-antitoxin system	-	-	-	ko:K19166	-	-	-	-	ko00000,ko01000,ko02048	-	-	-	HigB_toxin
BYD3_k127_2851228_0	313606.M23134_07726	3.746e-52	194.0	COG0296@1|root,COG1372@1|root,COG1404@1|root,COG4447@1|root,COG0296@2|Bacteria,COG1372@2|Bacteria,COG1404@2|Bacteria,COG4447@2|Bacteria,4NEZQ@976|Bacteroidetes,47PGJ@768503|Cytophagia	976|Bacteroidetes	G	Participates in initiation and elongation during chromosome replication	-	-	-	-	-	-	-	-	-	-	-	-	PKD,Sortilin-Vps10
BYD3_k127_2851724_1	760192.Halhy_2936	1.259e-120	402.0	COG0612@1|root,COG0612@2|Bacteria,4NEDZ@976|Bacteroidetes,1INSD@117747|Sphingobacteriia	976|Bacteroidetes	S	Peptidase M16	-	-	-	ko:K07263	-	-	-	-	ko00000,ko01000,ko01002	-	-	-	Peptidase_M16,Peptidase_M16_C
BYD3_k127_2851724_2	1122176.KB903551_gene4223	5.236e-107	381.0	COG0308@1|root,COG0308@2|Bacteria,4NEXH@976|Bacteroidetes,1IPHQ@117747|Sphingobacteriia	976|Bacteroidetes	E	Peptidase family M1 domain	-	-	3.4.11.2	ko:K01256	ko00480,ko01100,map00480,map01100	-	R00899,R04951	RC00096,RC00141	ko00000,ko00001,ko01000,ko01002	-	-	-	Peptidase_M1
BYD3_k127_2851724_3	1122176.KB903551_gene4231	1.226e-69	250.0	COG1218@1|root,COG1218@2|Bacteria,4NFHY@976|Bacteroidetes,1ISXY@117747|Sphingobacteriia	976|Bacteroidetes	P	COG1218 3'-Phosphoadenosine 5'-phosphosulfate (PAPS) 3'-phosphatase	cysQ	-	3.1.3.7	ko:K01082	ko00920,ko01100,ko01120,ko01130,map00920,map01100,map01120,map01130	-	R00188,R00508	RC00078	ko00000,ko00001,ko01000,ko03016	-	-	-	Inositol_P
BYD3_k127_2851724_4	1434325.AZQN01000004_gene1836	7.606e-12	72.0	COG1331@1|root,COG1331@2|Bacteria,4NMU8@976|Bacteroidetes,47Y8I@768503|Cytophagia	976|Bacteroidetes	O	Protein of unknown function, DUF255	-	-	-	-	-	-	-	-	-	-	-	-	Thioredoxin,Thioredoxin_2,Thioredoxin_7
BYD3_k127_2851724_0	760192.Halhy_2136	7.626e-126	410.0	COG0322@1|root,COG0322@2|Bacteria,4NE61@976|Bacteroidetes,1IPMR@117747|Sphingobacteriia	976|Bacteroidetes	L	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision	uvrC	GO:0005575,GO:0005622,GO:0005623,GO:0006950,GO:0006974,GO:0008150,GO:0009380,GO:0009987,GO:0032991,GO:0033554,GO:0044424,GO:0044464,GO:0050896,GO:0051716,GO:1902494,GO:1905347,GO:1905348,GO:1990391	-	ko:K03703	ko03420,map03420	-	-	-	ko00000,ko00001,ko03400	-	-	-	GIY-YIG,HHH_2,HHH_5,UVR,UvrC_HhH_N
BYD3_k127_28551_0	1122176.KB903531_gene2797	0.0	1001.0	COG0843@1|root,COG0843@2|Bacteria,4NEH8@976|Bacteroidetes,1IPZE@117747|Sphingobacteriia	976|Bacteroidetes	C	Belongs to the heme-copper respiratory oxidase family	coxN	-	1.9.3.1	ko:K02274	ko00190,ko01100,map00190,map01100	M00155	R00081	RC00016	ko00000,ko00001,ko00002,ko01000	3.D.4.2,3.D.4.3,3.D.4.4,3.D.4.6	-	-	COX1
BYD3_k127_28551_1	1122176.KB903531_gene2798	5.167e-185	591.0	COG1622@1|root,COG2885@1|root,COG1622@2|Bacteria,COG2885@2|Bacteria,4NFNF@976|Bacteroidetes,1IPEE@117747|Sphingobacteriia	976|Bacteroidetes	C	Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B)	ctaC	-	1.9.3.1	ko:K02275	ko00190,ko01100,map00190,map01100	M00155	R00081	RC00016	ko00000,ko00001,ko00002,ko01000	3.D.4.2,3.D.4.4,3.D.4.6	-	-	COX2,COX2_TM
BYD3_k127_28551_2	760192.Halhy_4874	2.576e-155	500.0	COG4531@1|root,COG4531@2|Bacteria,4NF0R@976|Bacteroidetes,1IPBN@117747|Sphingobacteriia	976|Bacteroidetes	P	Quinol cytochrome c oxidoreductase	actF	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_28551_3	760192.Halhy_4873	1.82e-78	270.0	COG2010@1|root,COG2010@2|Bacteria,4NKQI@976|Bacteroidetes,1IRVN@117747|Sphingobacteriia	976|Bacteroidetes	C	cytochrome C	actE	-	-	-	-	-	-	-	-	-	-	-	Cytochrome_CBB3
BYD3_k127_287163_1	1121897.AUGO01000002_gene2405	4.107e-146	477.0	COG3203@1|root,COG3203@2|Bacteria,4PKUC@976|Bacteroidetes	976|Bacteroidetes	M	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane	-	-	-	-	-	-	-	-	-	-	-	-	CarbopepD_reg_2
BYD3_k127_287163_0	153721.MYP_881	6.745e-175	558.0	COG0025@1|root,COG0025@2|Bacteria,4NF54@976|Bacteroidetes,47KDJ@768503|Cytophagia	976|Bacteroidetes	P	Sodium/hydrogen exchanger family	nhaP	-	-	ko:K03316	-	-	-	-	ko00000	2.A.36	-	-	Na_H_Exchanger
BYD3_k127_287163_4	639030.JHVA01000001_gene593	9.109e-05	52.0	COG3119@1|root,COG3119@2|Bacteria,3Y2QE@57723|Acidobacteria,2JKHV@204432|Acidobacteriia	204432|Acidobacteriia	P	arylsulfatase activity	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_2882150_0	1122176.KB903531_gene2794	4.69e-124	406.0	COG1845@1|root,COG1845@2|Bacteria,4NDYG@976|Bacteroidetes,1INPX@117747|Sphingobacteriia	976|Bacteroidetes	C	oxidase subunit III	coxP	-	1.9.3.1	ko:K02276	ko00190,ko01100,map00190,map01100	M00155	R00081	RC00016	ko00000,ko00001,ko00002,ko01000	3.D.4.4,3.D.4.6	-	-	COX3
BYD3_k127_2882150_2	1122176.KB903531_gene2795	9.46e-60	212.0	COG1845@1|root,COG1845@2|Bacteria,4NFA7@976|Bacteroidetes,1IST1@117747|Sphingobacteriia	976|Bacteroidetes	C	cytochrome c oxidase subunit III	ctaE	-	1.9.3.1	ko:K02276	ko00190,ko01100,map00190,map01100	M00155	R00081	RC00016	ko00000,ko00001,ko00002,ko01000	3.D.4.4,3.D.4.6	-	-	COX3
BYD3_k127_2882150_1	1122176.KB903531_gene2796	8.437e-80	276.0	COG0109@1|root,COG0109@2|Bacteria,4NF5A@976|Bacteroidetes,1IRUR@117747|Sphingobacteriia	976|Bacteroidetes	O	Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group	ctaB	-	2.5.1.141	ko:K02257	ko00190,ko00860,ko01100,ko01110,ko04714,map00190,map00860,map01100,map01110,map04714	M00154	R07411	RC01786	ko00000,ko00001,ko00002,ko01000,ko01006,ko03029	-	-	-	UbiA
BYD3_k127_289448_0	1237149.C900_00249	9.59e-44	170.0	COG1629@1|root,COG1629@2|Bacteria,4NF88@976|Bacteroidetes,47JEF@768503|Cytophagia	976|Bacteroidetes	P	Outer membrane protein beta-barrel family	-	-	-	-	-	-	-	-	-	-	-	-	CarbopepD_reg_2,CarboxypepD_reg,OMP_b-brl_3
BYD3_k127_289448_1	760192.Halhy_6398	2.896e-32	134.0	COG2885@1|root,COG3292@1|root,COG2885@2|Bacteria,COG3292@2|Bacteria	2|Bacteria	M	chlorophyll binding	pal	-	-	ko:K03640	-	-	-	-	ko00000,ko02000	2.C.1.2	-	-	OmpA
BYD3_k127_2904800_2	394221.Mmar10_0359	5.215e-07	51.0	COG2234@1|root,COG2234@2|Bacteria,1MV86@1224|Proteobacteria,2TVJ5@28211|Alphaproteobacteria,43WXS@69657|Hyphomonadaceae	28211|Alphaproteobacteria	S	M28 family peptidase	-	-	-	-	-	-	-	-	-	-	-	-	PA,Peptidase_M28
BYD3_k127_2904800_1	1122176.KB903541_gene285	1.024e-56	210.0	COG0589@1|root,COG0589@2|Bacteria,4NHXF@976|Bacteroidetes,1ISXT@117747|Sphingobacteriia	976|Bacteroidetes	T	Belongs to the universal stress protein A family	-	-	-	-	-	-	-	-	-	-	-	-	Usp
BYD3_k127_2904800_0	1122176.KB903546_gene1028	2.112e-113	389.0	COG2133@1|root,COG2133@2|Bacteria	2|Bacteria	G	pyrroloquinoline quinone binding	manA5	-	3.2.1.51,3.2.1.78	ko:K01206,ko:K01218	ko00051,ko00511,ko02024,map00051,map00511,map02024	-	R01332	RC00467	ko00000,ko00001,ko01000,ko04147	-	GH26,GH29	-	Alpha_L_fucos,Cytochrome_C554,Glyco_hydro_26,PA14,RsgI_N
BYD3_k127_2904800_3	203275.BFO_2665	0.00025	45.0	COG1404@1|root,COG1404@2|Bacteria	2|Bacteria	O	Belongs to the peptidase S8 family	-	-	-	-	-	-	-	-	-	-	-	-	Peptidase_S8
BYD3_k127_29669_6	1380384.JADN01000004_gene1751	5.839e-08	63.0	COG0658@1|root,COG0658@2|Bacteria,4NEJH@976|Bacteroidetes,1HYJH@117743|Flavobacteriia	976|Bacteroidetes	S	Competence protein	comEC	-	-	ko:K02238	-	M00429	-	-	ko00000,ko00002,ko02044	3.A.11.1,3.A.11.2	-	-	Competence,DUF4131
BYD3_k127_29669_5	1122225.AULQ01000005_gene2679	7.876e-18	93.0	COG3743@1|root,COG3743@2|Bacteria,4NQAU@976|Bacteroidetes,1I38D@117743|Flavobacteriia	976|Bacteroidetes	S	rRNA binding	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_29669_1	760192.Halhy_1228	1.842e-218	692.0	COG1132@1|root,COG1132@2|Bacteria,4NDY6@976|Bacteroidetes,1IPDM@117747|Sphingobacteriia	976|Bacteroidetes	V	ABC transporter	mdlA	-	-	ko:K18889	ko02010,map02010	M00707	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.106.13,3.A.1.106.5	-	-	ABC_membrane,ABC_tran
BYD3_k127_29669_4	760192.Halhy_1229	1.506e-41	155.0	2ASD9@1|root,31HSR@2|Bacteria,4NQ71@976|Bacteroidetes,1IU9P@117747|Sphingobacteriia	976|Bacteroidetes	S	SMART PUR-alpha beta gamma DNA RNA-binding	-	-	-	-	-	-	-	-	-	-	-	-	DUF3276
BYD3_k127_29669_3	1122176.KB903535_gene2006	4.407e-91	321.0	COG4733@1|root,COG5276@1|root,COG4733@2|Bacteria,COG5276@2|Bacteria,4NDUD@976|Bacteroidetes	976|Bacteroidetes	E	regulator of chromosome condensation, RCC1	-	-	-	-	-	-	-	-	-	-	-	-	LVIVD,MAM,TSP_3,fn3
BYD3_k127_29669_2	760192.Halhy_1375	3.489e-121	398.0	COG2008@1|root,COG2008@2|Bacteria,4NEIH@976|Bacteroidetes,1IQZT@117747|Sphingobacteriia	976|Bacteroidetes	E	Threonine aldolase	ltaA	-	4.1.2.48	ko:K01620	ko00260,ko01100,ko01110,ko01120,ko01130,ko01230,map00260,map01100,map01110,map01120,map01130,map01230	-	R00751,R06171	RC00312,RC00372	ko00000,ko00001,ko01000	-	-	-	Beta_elim_lyase
BYD3_k127_29669_0	1122176.KB903609_gene5161	1.233e-266	830.0	COG4799@1|root,COG4799@2|Bacteria,4NEMJ@976|Bacteroidetes,1IPEF@117747|Sphingobacteriia	976|Bacteroidetes	I	Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta)	accD5	-	-	-	-	-	-	-	-	-	-	-	Carboxyl_trans
BYD3_k127_2989942_4	929703.KE386491_gene118	1.406e-76	263.0	COG2318@1|root,COG2318@2|Bacteria,4NKB3@976|Bacteroidetes,47NHI@768503|Cytophagia	976|Bacteroidetes	S	Mycothiol maleylpyruvate isomerase N-terminal domain	-	-	-	-	-	-	-	-	-	-	-	-	MDMPI_N
BYD3_k127_2989942_5	1123248.KB893348_gene350	4.176e-42	162.0	COG1388@1|root,COG1705@1|root,COG1388@2|Bacteria,COG1705@2|Bacteria,4NEER@976|Bacteroidetes,1IP5H@117747|Sphingobacteriia	976|Bacteroidetes	NU	COG1705 Muramidase (flagellum-specific)	lytG	-	-	-	-	-	-	-	-	-	-	-	Glucosaminidase,LysM
BYD3_k127_2989942_0	760192.Halhy_3323	1.444e-129	422.0	COG1995@1|root,COG1995@2|Bacteria,4NEUR@976|Bacteroidetes,1IP2F@117747|Sphingobacteriia	976|Bacteroidetes	H	Belongs to the PdxA family	pdxA	-	1.1.1.262	ko:K00097	ko00750,ko01100,map00750,map01100	M00124	R05681,R05837,R07406	RC00089,RC00675,RC01475	ko00000,ko00001,ko00002,ko01000	-	-	-	PdxA
BYD3_k127_2989942_7	1123057.P872_21260	3.726e-26	112.0	COG2010@1|root,COG2010@2|Bacteria,4NYN7@976|Bacteroidetes	976|Bacteroidetes	C	Cytochrome c	-	-	-	-	-	-	-	-	-	-	-	-	PSCyt1
BYD3_k127_2989942_3	1123057.P872_21265	1.077e-79	277.0	COG3637@1|root,COG3637@2|Bacteria,4NE33@976|Bacteroidetes,47UNC@768503|Cytophagia	976|Bacteroidetes	M	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_2989942_1	929556.Solca_2233	1.705e-109	364.0	COG0437@1|root,COG0437@2|Bacteria,4NI8R@976|Bacteroidetes	976|Bacteroidetes	C	4Fe-4S dicluster domain	-	-	-	ko:K00184	-	-	-	-	ko00000	5.A.3	-	-	Fer4_11
BYD3_k127_2989942_2	866536.Belba_1302	3.079e-89	310.0	COG5557@1|root,COG5557@2|Bacteria,4NE3X@976|Bacteroidetes,47K18@768503|Cytophagia	976|Bacteroidetes	C	PFAM Polysulphide reductase, NrfD	-	-	-	ko:K00185	-	-	-	-	ko00000	5.A.3	-	-	NrfD
BYD3_k127_2989942_6	1121875.KB907546_gene2671	1.024e-33	134.0	COG2010@1|root,COG2010@2|Bacteria,4NV2A@976|Bacteroidetes,1I5FJ@117743|Flavobacteriia	976|Bacteroidetes	C	Cytochrome C oxidase, cbb3-type, subunit III	-	-	-	-	-	-	-	-	-	-	-	-	Cytochrome_CBB3
BYD3_k127_2989942_8	552811.Dehly_0442	8.315e-21	98.0	COG3303@1|root,COG3303@2|Bacteria	2|Bacteria	C	Catalyzes the reduction of nitrite to ammonia, consuming six electrons in the process	-	-	-	-	-	-	-	-	-	-	-	-	Cytochrom_c3_2
BYD3_k127_301287_2	1313421.JHBV01000005_gene4603	1.595e-109	368.0	COG0557@1|root,COG0557@2|Bacteria,4NE7T@976|Bacteroidetes,1IPGD@117747|Sphingobacteriia	976|Bacteroidetes	K	3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs	rnr	-	-	ko:K12573,ko:K12585	ko03018,map03018	M00391	-	-	ko00000,ko00001,ko00002,ko01000,ko03016,ko03019	-	-	-	OB_RNB,RNB,S1
BYD3_k127_301287_3	760192.Halhy_3549	1.912e-73	261.0	COG1858@1|root,COG1858@2|Bacteria,4NJGU@976|Bacteroidetes,1J099@117747|Sphingobacteriia	976|Bacteroidetes	P	Di-haem cytochrome c peroxidase	-	-	1.11.1.5	ko:K00428	-	-	-	-	ko00000,ko01000	-	-	-	CCP_MauG,Cytochrom_C
BYD3_k127_301287_0	1122176.KB903542_gene307	3.516e-253	795.0	COG0326@1|root,COG0326@2|Bacteria,4NDXZ@976|Bacteroidetes,1IP5W@117747|Sphingobacteriia	976|Bacteroidetes	O	Heat shock protein Hsp90	htpG	-	-	ko:K04079	ko04141,ko04151,ko04217,ko04612,ko04621,ko04626,ko04657,ko04659,ko04914,ko04915,ko05200,ko05215,ko05418,map04141,map04151,map04217,map04612,map04621,map04626,map04657,map04659,map04914,map04915,map05200,map05215,map05418	-	-	-	ko00000,ko00001,ko01009,ko03029,ko03051,ko03110,ko04131,ko04147	-	-	-	HATPase_c_3,HSP90
BYD3_k127_301287_1	760192.Halhy_5351	1.333e-152	501.0	COG1807@1|root,COG1807@2|Bacteria,4NPS7@976|Bacteroidetes	976|Bacteroidetes	M	4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_3039832_2	1218108.KB908292_gene1577	9.93e-34	142.0	COG4886@1|root,COG4886@2|Bacteria,4NR6Y@976|Bacteroidetes,1I2WF@117743|Flavobacteriia	976|Bacteroidetes	S	PFAM Receptor L domain	-	-	-	-	-	-	-	-	-	-	-	-	Recep_L_domain
BYD3_k127_3039832_0	1185876.BN8_03723	3.906e-174	554.0	COG0513@1|root,COG0513@2|Bacteria,4NEVI@976|Bacteroidetes,47J9E@768503|Cytophagia	976|Bacteroidetes	L	Belongs to the DEAD box helicase family	rhlE	-	3.6.4.13	ko:K11927	ko03018,map03018	-	-	-	ko00000,ko00001,ko01000,ko03019	-	-	-	DEAD,Helicase_C
BYD3_k127_3039832_1	1122176.KB903536_gene1852	3.784e-61	230.0	COG4886@1|root,COG4886@2|Bacteria,4NR6Y@976|Bacteroidetes	976|Bacteroidetes	E	PFAM Receptor L domain	-	-	-	-	-	-	-	-	-	-	-	-	Recep_L_domain
BYD3_k127_3049005_3	1122176.KB903609_gene5256	1.391e-52	187.0	COG1239@1|root,COG1239@2|Bacteria,4NF1J@976|Bacteroidetes,1IQK5@117747|Sphingobacteriia	976|Bacteroidetes	H	Sigma-54 interaction domain	chlI	-	6.6.1.1	ko:K03405	ko00860,ko01100,ko01110,map00860,map01100,map01110	-	R03877	RC01012	ko00000,ko00001,ko01000	-	-	-	AAA_5,Sigma54_activat
BYD3_k127_3049005_0	760192.Halhy_0861	8.178e-168	534.0	COG4867@1|root,COG4867@2|Bacteria,4NFMA@976|Bacteroidetes,1INMN@117747|Sphingobacteriia	976|Bacteroidetes	S	von Willebrand factor, type A	-	-	-	-	-	-	-	-	-	-	-	-	VWA_2
BYD3_k127_3049005_2	1122176.KB903587_gene4389	3.145e-55	205.0	COG4372@1|root,COG4372@2|Bacteria,4NVE9@976|Bacteroidetes,1J0WS@117747|Sphingobacteriia	976|Bacteroidetes	S	Transposase	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_3049005_1	1122179.KB890413_gene4766	5.835e-74	256.0	COG0417@1|root,COG0417@2|Bacteria,4PKQ5@976|Bacteroidetes,1J0WR@117747|Sphingobacteriia	976|Bacteroidetes	L	Predicted 3'-5' exonuclease related to the exonuclease domain of PolB	-	-	-	ko:K07501	-	-	-	-	ko00000	-	-	-	DNA_pol_B_exo2
BYD3_k127_3059993_4	760192.Halhy_3066	3.139e-60	224.0	COG3206@1|root,COG3206@2|Bacteria,4NWAG@976|Bacteroidetes,1IZTF@117747|Sphingobacteriia	976|Bacteroidetes	M	Chain length determinant protein	-	-	-	-	-	-	-	-	-	-	-	-	Wzz
BYD3_k127_3059993_1	1122605.KB893646_gene107	1.385e-145	468.0	COG0861@1|root,COG0861@2|Bacteria,4NH7P@976|Bacteroidetes,1IQW6@117747|Sphingobacteriia	976|Bacteroidetes	P	Integral membrane protein TerC	-	-	-	ko:K05794	-	-	-	-	ko00000	-	-	-	TerC
BYD3_k127_3059993_0	1122176.KB903550_gene4281	0.0	1076.0	COG1196@1|root,COG1196@2|Bacteria,4NF7P@976|Bacteroidetes,1J0XD@117747|Sphingobacteriia	976|Bacteroidetes	D	protein involved in exopolysaccharide biosynthesis	-	-	-	-	-	-	-	-	-	-	-	-	DUF4175
BYD3_k127_3059993_7	1313421.JHBV01000025_gene1018	4.95e-31	126.0	COG2172@1|root,COG2172@2|Bacteria,4NRAA@976|Bacteroidetes,1IT0C@117747|Sphingobacteriia	976|Bacteroidetes	T	PFAM Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase	rsbW	-	2.7.11.1	ko:K04757	-	-	-	-	ko00000,ko01000,ko01001,ko03021	-	-	-	HATPase_c_2
BYD3_k127_3059993_5	471854.Dfer_3801	1.052e-35	141.0	COG0319@1|root,COG0319@2|Bacteria,4NS93@976|Bacteroidetes,47Q9Q@768503|Cytophagia	976|Bacteroidetes	S	Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA	ybeY	-	-	-	-	-	-	-	-	-	-	-	UPF0054
BYD3_k127_3059993_2	760192.Halhy_3410	1.725e-140	457.0	COG0579@1|root,COG0579@2|Bacteria,4NE0B@976|Bacteroidetes,1IQ3I@117747|Sphingobacteriia	976|Bacteroidetes	S	FAD dependent oxidoreductase	lhgO	-	-	ko:K15736	-	-	-	-	ko00000,ko01000	-	-	-	DAO
BYD3_k127_3059993_3	1122176.KB903546_gene979	3.115e-96	319.0	COG0694@1|root,COG0694@2|Bacteria,4NG0Q@976|Bacteroidetes,1IQ4T@117747|Sphingobacteriia	976|Bacteroidetes	O	PFAM Scaffold protein Nfu NifU N terminal	-	-	-	-	-	-	-	-	-	-	-	-	Nfu_N,NifU
BYD3_k127_3059993_6	935837.JAEK01000008_gene3485	1.603e-34	141.0	COG2120@1|root,COG2120@2|Bacteria,1V2QU@1239|Firmicutes,4HGPT@91061|Bacilli,1ZGPD@1386|Bacillus	91061|Bacilli	S	GlcNAc-PI de-N-acetylase	-	-	-	ko:K01463	-	-	-	-	ko00000,ko01000	-	-	-	PIG-L
BYD3_k127_3059993_8	1158338.JNLJ01000001_gene1275	1.584e-11	69.0	COG0438@1|root,COG0438@2|Bacteria,2G49S@200783|Aquificae	200783|Aquificae	M	PFAM Glycosyl transferase, group 1	-	-	-	-	-	-	-	-	-	-	-	-	Glyco_transf_4,Glycos_transf_1
BYD3_k127_3062838_0	290317.Cpha266_2335	3.263e-62	234.0	COG2931@1|root,COG3209@1|root,COG3468@1|root,COG2931@2|Bacteria,COG3209@2|Bacteria,COG3468@2|Bacteria	2|Bacteria	MU	cell adhesion	-	-	-	-	-	-	-	-	-	-	-	-	DUF4114,DUF4347,DUF5122,HemolysinCabind,LRR_5
BYD3_k127_3063607_0	1177154.Y5S_03011	4.341e-53	194.0	COG3793@1|root,COG3793@2|Bacteria,1P6XA@1224|Proteobacteria,1SV9P@1236|Gammaproteobacteria	1236|Gammaproteobacteria	P	zinc-ribbon family	-	-	-	-	-	-	-	-	-	-	-	-	zinc_ribbon_15
BYD3_k127_3063607_2	886377.Murru_0515	5.343e-13	76.0	2AVE1@1|root,31M5W@2|Bacteria,4NS2G@976|Bacteroidetes,1I4MZ@117743|Flavobacteriia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	DUF3575
BYD3_k127_3063607_3	1191523.MROS_0535	3.832e-10	69.0	COG1404@1|root,COG1404@2|Bacteria	2|Bacteria	O	Belongs to the peptidase S8 family	-	-	-	-	-	-	-	-	-	-	-	-	CAP,Calx-beta,CarboxypepD_reg,DUF1524,Polysacc_deac_1,SLH,VCBS
BYD3_k127_3067266_3	1202532.FF52_01590	1.763e-41	177.0	COG4932@1|root,COG4932@2|Bacteria	2|Bacteria	M	domain protein	-	-	-	-	-	-	-	-	-	-	-	-	CarboxypepD_reg,DUF11,SdrD_B,SprB
BYD3_k127_3067266_4	1123248.KB893337_gene2561	3.051e-25	124.0	COG3210@1|root,COG4932@1|root,COG3210@2|Bacteria,COG4932@2|Bacteria	2|Bacteria	M	domain protein	-	-	-	-	-	-	-	-	-	-	-	-	Beta_helix,Big_2,Calx-beta,Cna_B,Collagen_bind,Glug,Gram_pos_anchor,He_PIG,PATR,SLH,VWA_2,YSIRK_signal
BYD3_k127_3067266_6	1121931.AUHG01000018_gene1318	2.855e-07	64.0	COG1361@1|root,COG3209@1|root,COG1361@2|Bacteria,COG3209@2|Bacteria,4PPHG@976|Bacteroidetes	976|Bacteroidetes	M	COG3209 Rhs family protein	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_3067266_5	926559.JoomaDRAFT_3935	1.529e-16	83.0	COG4068@1|root,COG4068@2|Bacteria,4NUJZ@976|Bacteroidetes,1I4FN@117743|Flavobacteriia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_3067266_0	760192.Halhy_0215	3.441e-176	578.0	COG0076@1|root,COG0076@2|Bacteria,4NJ2F@976|Bacteroidetes	976|Bacteroidetes	E	Belongs to the group II decarboxylase family	gadB	-	4.1.1.15,4.1.2.27	ko:K01580,ko:K01634	ko00250,ko00410,ko00430,ko00600,ko00650,ko01100,ko01110,ko01120,ko02024,ko04071,ko04727,ko04940,map00250,map00410,map00430,map00600,map00650,map01100,map01110,map01120,map02024,map04071,map04727,map04940	M00027,M00100	R00261,R00489,R01682,R02464,R02466,R06516	RC00264,RC00299,RC00721,RC01266	ko00000,ko00001,ko00002,ko01000	-	-	-	Pyridoxal_deC
BYD3_k127_3067266_2	1123057.P872_19365	1.442e-50	184.0	COG2270@1|root,COG2270@2|Bacteria,4NEKI@976|Bacteroidetes,47JQM@768503|Cytophagia	976|Bacteroidetes	S	PFAM Vacuole effluxer Atg22 like	-	-	-	ko:K06902	ko04138,map04138	-	-	-	ko00000,ko00001,ko02000,ko04131	2.A.1.24,9.A.15.1	-	-	ATG22
BYD3_k127_3074356_0	929703.KE386492_gene4422	2.53e-267	839.0	COG4206@1|root,COG4772@1|root,COG4206@2|Bacteria,COG4772@2|Bacteria,4NH5V@976|Bacteroidetes,47KFP@768503|Cytophagia	976|Bacteroidetes	P	PFAM TonB-dependent Receptor	-	-	-	ko:K16091	-	-	-	-	ko00000,ko02000	1.B.14.1.14	-	-	CarbopepD_reg_2,Plug,TonB_dep_Rec
BYD3_k127_3074356_1	1185876.BN8_05503	4.804e-163	519.0	COG3938@1|root,COG3938@2|Bacteria,4NHJZ@976|Bacteroidetes,47KV9@768503|Cytophagia	976|Bacteroidetes	E	Belongs to the proline racemase family	-	-	5.1.1.8	ko:K12658	ko00330,map00330	-	R03296	RC00479	ko00000,ko00001,ko01000	-	-	-	Pro_racemase
BYD3_k127_3074356_2	1286632.P278_08280	1.24e-124	411.0	COG0665@1|root,COG0665@2|Bacteria,4NEUE@976|Bacteroidetes,1HYMG@117743|Flavobacteriia	976|Bacteroidetes	E	Glycine D-amino acid	-	-	-	-	-	-	-	-	-	-	-	-	DAO
BYD3_k127_3074356_3	1121904.ARBP01000007_gene2995	1.052e-112	389.0	COG1629@1|root,COG4771@2|Bacteria,4PM07@976|Bacteroidetes,47YPI@768503|Cytophagia	976|Bacteroidetes	P	TonB dependent receptor	-	-	-	ko:K02014	-	-	-	-	ko00000,ko02000	1.B.14	-	-	CarbopepD_reg_2,Plug,TonB_dep_Rec
BYD3_k127_3074356_6	926562.Oweho_1160	5.434e-40	153.0	COG0545@1|root,COG0545@2|Bacteria,4NQJS@976|Bacteroidetes,1I376@117743|Flavobacteriia,2PBTV@246874|Cryomorphaceae	976|Bacteroidetes	O	FKBP-type peptidyl-prolyl cis-trans isomerase	-	-	5.2.1.8	ko:K03772	-	-	-	-	ko00000,ko01000,ko03110	-	-	-	FKBP_C
BYD3_k127_3074356_5	1122176.KB903543_gene452	8.183e-69	242.0	2C8XG@1|root,2Z7PK@2|Bacteria,4NEU8@976|Bacteroidetes,1IXS1@117747|Sphingobacteriia	976|Bacteroidetes	S	Protein of unknown function (DUF4197)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4197
BYD3_k127_3074356_4	1122176.KB903565_gene3403	4.509e-75	261.0	COG0697@1|root,COG0697@2|Bacteria	2|Bacteria	EG	spore germination	-	-	-	-	-	-	-	-	-	-	-	-	EamA
BYD3_k127_3086207_3	929703.KE386491_gene297	1.753e-68	239.0	COG2197@1|root,COG2197@2|Bacteria,4NHTM@976|Bacteroidetes,47PWE@768503|Cytophagia	976|Bacteroidetes	KT	Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain	-	-	-	-	-	-	-	-	-	-	-	-	GerE,Response_reg
BYD3_k127_3086207_1	1121957.ATVL01000008_gene4646	9.644e-171	573.0	COG3292@1|root,COG4585@1|root,COG3292@2|Bacteria,COG4585@2|Bacteria,4NK8Q@976|Bacteroidetes,47KVN@768503|Cytophagia	976|Bacteroidetes	T	Two component regulator propeller	-	-	-	-	-	-	-	-	-	-	-	-	HATPase_c,HisKA_3,Reg_prop,Y_Y_Y
BYD3_k127_3086207_0	991.IW20_18055	1.886e-289	905.0	COG3408@1|root,COG3408@2|Bacteria,4NFMY@976|Bacteroidetes,1I7ZZ@117743|Flavobacteriia,2NVTS@237|Flavobacterium	976|Bacteroidetes	G	Glycogen debranching enzyme	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_3086207_2	1120951.AUBG01000006_gene517	8.898e-109	364.0	COG0457@1|root,COG0457@2|Bacteria,4NFMI@976|Bacteroidetes,1HZPZ@117743|Flavobacteriia	976|Bacteroidetes	S	Tetratricopeptide repeat	-	-	-	-	-	-	-	-	-	-	-	-	TPR_8
BYD3_k127_3086471_1	269798.CHU_0078	6.505e-38	160.0	COG1807@1|root,COG1807@2|Bacteria	2|Bacteria	M	4-amino-4-deoxy-L-arabinose transferase activity	-	-	-	-	-	-	-	-	-	-	-	-	PMT_2
BYD3_k127_3086471_0	1122176.KB903546_gene977	5.913e-234	733.0	COG0606@1|root,COG0606@2|Bacteria,4NE0G@976|Bacteroidetes,1INNX@117747|Sphingobacteriia	976|Bacteroidetes	O	chelatase, subunit chli	comM	-	-	ko:K07391	-	-	-	-	ko00000	-	-	-	ChlI,Mg_chelatase,Mg_chelatase_C
BYD3_k127_3129189_0	1122176.KB903561_gene3589	1.632e-74	259.0	COG2010@1|root,COG2010@2|Bacteria,4PEWN@976|Bacteroidetes,1IXW6@117747|Sphingobacteriia	976|Bacteroidetes	C	Cytochrome c	-	-	-	-	-	-	-	-	-	-	-	-	PSCyt1
BYD3_k127_3129189_2	1122176.KB903561_gene3590	3.848e-28	117.0	COG2010@1|root,COG2010@2|Bacteria	2|Bacteria	C	Cytochrome c	-	-	-	-	-	-	-	-	-	-	-	-	Cytochrome_CBB3,PSCyt1
BYD3_k127_3129189_4	1408433.JHXV01000006_gene2649	1.032e-17	88.0	2AEUM@1|root,314S0@2|Bacteria,4PJ0U@976|Bacteroidetes,1ICTR@117743|Flavobacteriia,2PC4S@246874|Cryomorphaceae	976|Bacteroidetes	S	tRNA_anti-like	-	-	-	-	-	-	-	-	-	-	-	-	tRNA_anti-like
BYD3_k127_3129189_1	1122176.KB903561_gene3592	8.761e-48	177.0	COG2353@1|root,COG2353@2|Bacteria,4NSJH@976|Bacteroidetes,1IY6E@117747|Sphingobacteriia	976|Bacteroidetes	S	PFAM Lipid polyisoprenoid-binding, YceI-like	-	-	-	-	-	-	-	-	-	-	-	-	YceI
BYD3_k127_3134949_0	1122605.KB893628_gene4541	4.729e-152	487.0	COG1649@1|root,COG1649@2|Bacteria,4NFKQ@976|Bacteroidetes,1IP9B@117747|Sphingobacteriia	976|Bacteroidetes	S	PFAM Uncharacterised BCR, COG1649	-	-	-	-	-	-	-	-	-	-	-	-	GHL10
BYD3_k127_3134949_1	700598.Niako_6243	7.498e-51	184.0	COG1846@1|root,COG1846@2|Bacteria,4NQ5T@976|Bacteroidetes,1IT21@117747|Sphingobacteriia	976|Bacteroidetes	K	Transcriptional regulator	-	-	-	-	-	-	-	-	-	-	-	-	MarR,MarR_2
BYD3_k127_3134949_2	1443665.JACA01000049_gene5398	1.204e-38	147.0	COG3631@1|root,COG3631@2|Bacteria,4NUVF@976|Bacteroidetes,1I63Y@117743|Flavobacteriia	976|Bacteroidetes	S	Ketosteroid isomerase-related protein	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_3150404_0	929556.Solca_1727	3.069e-206	660.0	COG0841@1|root,COG0841@2|Bacteria,4NDZG@976|Bacteroidetes,1IQYT@117747|Sphingobacteriia	976|Bacteroidetes	V	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family	-	-	-	-	-	-	-	-	-	-	-	-	ACR_tran
BYD3_k127_3150404_2	755732.Fluta_3094	1.126e-17	84.0	2EHZ3@1|root,33BQJ@2|Bacteria,4NXH5@976|Bacteroidetes	976|Bacteroidetes	S	Kazal type serine protease inhibitors	-	-	-	-	-	-	-	-	-	-	-	-	Kazal_1
BYD3_k127_3150404_1	153721.MYP_2423	1.688e-70	243.0	COG3647@1|root,COG3647@2|Bacteria,4NMNV@976|Bacteroidetes,47RI0@768503|Cytophagia	976|Bacteroidetes	S	Predicted membrane protein (DUF2238)	-	-	-	ko:K08984	-	-	-	-	ko00000	-	-	-	DUF2238
BYD3_k127_3205574_3	153721.MYP_4938	1.687e-27	127.0	COG3291@1|root,COG3291@2|Bacteria	2|Bacteria	S	metallopeptidase activity	-	-	-	-	-	-	-	-	-	-	-	-	CHU_C,PKD,SprB
BYD3_k127_3205574_5	1380600.AUYN01000001_gene2340	1.547e-16	93.0	COG2304@1|root,COG3291@1|root,COG3391@1|root,COG2304@2|Bacteria,COG3291@2|Bacteria,COG3391@2|Bacteria,4NDZC@976|Bacteroidetes,1IJ8A@117743|Flavobacteriia	976|Bacteroidetes	G	Pkd domain containing protein	-	-	-	-	-	-	-	-	-	-	-	-	CHU_C,Gal_Lectin,HYR,Laminin_G_3,PKD,SprB,TSP_3
BYD3_k127_3205574_6	1185876.BN8_04395	6.68e-12	76.0	2AB14@1|root,310ER@2|Bacteria,4NNNB@976|Bacteroidetes,47Q4B@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_3205574_1	700598.Niako_7018	3.045e-90	305.0	COG0789@1|root,COG0789@2|Bacteria,4NERC@976|Bacteroidetes,1ISN6@117747|Sphingobacteriia	976|Bacteroidetes	K	helix_turn_helix, mercury resistance	-	-	-	ko:K22491	-	-	-	-	ko00000,ko03000	-	-	-	B12-binding_2,MerR_1
BYD3_k127_3205574_0	1123234.AUKI01000011_gene1518	1.49e-210	664.0	COG1233@1|root,COG1233@2|Bacteria,4NF7K@976|Bacteroidetes,1HWP8@117743|Flavobacteriia	976|Bacteroidetes	Q	Phytoene dehydrogenase	crtI	-	1.3.99.26,1.3.99.28,1.3.99.29,1.3.99.31	ko:K10027	ko00906,ko01100,ko01110,map00906,map01100,map01110	-	R04787,R04798,R04800,R09691,R09692	RC01214,RC02088,RC02605	ko00000,ko00001,ko01000	-	-	-	Amino_oxidase
BYD3_k127_3205574_2	1089547.KB913013_gene2212	8.268e-84	286.0	COG1562@1|root,COG1562@2|Bacteria,4NEIK@976|Bacteroidetes,47J9F@768503|Cytophagia	976|Bacteroidetes	I	PFAM Squalene phytoene synthase	crtB	-	-	-	-	-	-	-	-	-	-	-	SQS_PSY
BYD3_k127_3205574_4	1358423.N180_02300	1.13e-26	115.0	2C56J@1|root,32YX8@2|Bacteria,4NW78@976|Bacteroidetes,1IYEC@117747|Sphingobacteriia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_3221593_3	760192.Halhy_2751	3.767e-47	173.0	arCOG12964@1|root,2Z7HP@2|Bacteria,4P10P@976|Bacteroidetes	976|Bacteroidetes	S	Tocopherol cyclase	-	-	-	-	-	-	-	-	-	-	-	-	Tocopherol_cycl
BYD3_k127_3221593_4	925409.KI911562_gene1150	0.0002944	52.0	2CEK0@1|root,321UV@2|Bacteria,4NUC9@976|Bacteroidetes,1IUMD@117747|Sphingobacteriia	976|Bacteroidetes	S	Domain of unknown function (DUF4271)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4271
BYD3_k127_3221593_0	760192.Halhy_3583	6.696e-104	343.0	COG1587@1|root,COG1587@2|Bacteria,4NEQ3@976|Bacteroidetes,1IPP4@117747|Sphingobacteriia	976|Bacteroidetes	H	Uroporphyrinogen-III synthase	hemD	-	4.2.1.75	ko:K01719	ko00860,ko01100,ko01110,ko01120,map00860,map01100,map01110,map01120	M00121	R03165	RC01861	ko00000,ko00001,ko00002,ko01000	-	-	-	HEM4
BYD3_k127_3221593_2	1122176.KB903548_gene1155	9.582e-48	179.0	COG0494@1|root,COG0494@2|Bacteria,4NM6C@976|Bacteroidetes,1IT9X@117747|Sphingobacteriia	976|Bacteroidetes	L	NUDIX domain	-	-	-	-	-	-	-	-	-	-	-	-	NUDIX
BYD3_k127_3221593_1	984262.SGRA_1904	3.297e-73	248.0	COG1703@1|root,COG1884@1|root,COG2185@1|root,COG1703@2|Bacteria,COG1884@2|Bacteria,COG2185@2|Bacteria,4NFHX@976|Bacteroidetes,1INXI@117747|Sphingobacteriia	976|Bacteroidetes	EI	Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly	icmF	-	5.4.99.13	ko:K11942	-	-	-	-	ko00000,ko01000	-	-	-	ArgK,B12-binding,MM_CoA_mutase
BYD3_k127_3228517_1	1237149.C900_01584	2.379e-152	489.0	COG1228@1|root,COG1228@2|Bacteria,4NE5U@976|Bacteroidetes,47M6X@768503|Cytophagia	976|Bacteroidetes	Q	PFAM Amidohydrolase family	-	-	-	-	-	-	-	-	-	-	-	-	Amidohydro_1
BYD3_k127_3228517_0	760192.Halhy_3533	1.097e-203	643.0	COG1236@1|root,COG1236@2|Bacteria,4NESD@976|Bacteroidetes,1IQ1N@117747|Sphingobacteriia	976|Bacteroidetes	J	exonuclease of the beta-lactamase fold involved in RNA processing	-	-	-	ko:K07576	-	-	-	-	ko00000	-	-	-	Beta-Casp,Lactamase_B,Lactamase_B_6,RMMBL
BYD3_k127_325426_7	760192.Halhy_3794	4.844e-16	79.0	COG1702@1|root,COG1702@2|Bacteria,4NDYV@976|Bacteroidetes,1INQV@117747|Sphingobacteriia	976|Bacteroidetes	T	Phosphate starvation-inducible protein PhoH	phoH	-	-	ko:K06217	-	-	-	-	ko00000	-	-	-	PhoH
BYD3_k127_325426_6	398720.MED217_08205	9.318e-17	83.0	COG1359@1|root,COG1359@2|Bacteria,4NSV0@976|Bacteroidetes,1I40Y@117743|Flavobacteriia,2XJNC@283735|Leeuwenhoekiella	976|Bacteroidetes	S	Antibiotic biosynthesis monooxygenase	-	-	-	-	-	-	-	-	-	-	-	-	ABM
BYD3_k127_325426_4	1124780.ANNU01000017_gene1907	6.529e-75	264.0	COG0337@1|root,COG0337@2|Bacteria,4NGSS@976|Bacteroidetes,47JBE@768503|Cytophagia	976|Bacteroidetes	E	Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)	aroB	-	4.2.3.4	ko:K01735	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	M00022	R03083	RC00847	ko00000,ko00001,ko00002,ko01000	-	-	-	DHQ_synthase
BYD3_k127_325426_0	760192.Halhy_3619	2.924e-239	765.0	COG5009@1|root,COG5009@2|Bacteria,4NECJ@976|Bacteroidetes,1IQ85@117747|Sphingobacteriia	976|Bacteroidetes	M	PFAM Penicillin binding protein transpeptidase domain	mrcA	-	2.4.1.129,3.4.16.4	ko:K05366	ko00550,ko01100,ko01501,map00550,map01100,map01501	-	-	-	ko00000,ko00001,ko01000,ko01003,ko01011	-	GT51	-	Transgly,Transpeptidase
BYD3_k127_325426_3	760192.Halhy_3618	3.938e-120	411.0	COG0652@1|root,COG1413@1|root,COG0652@2|Bacteria,COG1413@2|Bacteria,4PIRV@976|Bacteroidetes,1IZ2E@117747|Sphingobacteriia	976|Bacteroidetes	CO	Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD	-	-	-	-	-	-	-	-	-	-	-	-	HEAT_2,Pro_isomerase
BYD3_k127_325426_1	760192.Halhy_3617	1.387e-146	473.0	COG0404@1|root,COG0404@2|Bacteria,4NF7S@976|Bacteroidetes,1IPCZ@117747|Sphingobacteriia	976|Bacteroidetes	E	The glycine cleavage system catalyzes the degradation of glycine	gcvT	-	2.1.2.10	ko:K00605	ko00260,ko00630,ko00670,ko01100,ko01110,ko01130,ko01200,map00260,map00630,map00670,map01100,map01110,map01130,map01200	M00532	R01221,R02300,R04125	RC00022,RC00069,RC00183,RC02834	ko00000,ko00001,ko00002,ko01000	-	-	-	GCV_T,GCV_T_C
BYD3_k127_325426_5	760192.Halhy_2407	2.215e-62	228.0	COG4198@1|root,COG4198@2|Bacteria,4NGQH@976|Bacteroidetes,1ITIR@117747|Sphingobacteriia	976|Bacteroidetes	S	Protein of unknown function (DUF1015)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1015
BYD3_k127_325426_2	1313421.JHBV01000147_gene914	1.716e-130	425.0	COG0402@1|root,COG0402@2|Bacteria,4NJVU@976|Bacteroidetes,1IPAQ@117747|Sphingobacteriia	976|Bacteroidetes	F	amidohydrolase	-	-	3.5.4.40	ko:K20810	ko00130,ko01110,map00130,map01110	-	R10695	RC00477	ko00000,ko00001,ko01000	-	-	-	Amidohydro_1
BYD3_k127_3267874_4	391625.PPSIR1_06788	0.0001084	52.0	COG4886@1|root,COG4886@2|Bacteria	2|Bacteria	S	regulation of response to stimulus	-	-	-	-	-	-	-	-	-	-	-	-	DUF1573,Recep_L_domain
BYD3_k127_3267874_2	886377.Murru_2464	1.518e-42	159.0	arCOG13956@1|root,33BWW@2|Bacteria,4P4JQ@976|Bacteroidetes	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_3267874_1	1122179.KB890441_gene1065	1.074e-131	442.0	COG3291@1|root,COG3291@2|Bacteria,4NDZQ@976|Bacteroidetes,1IS57@117747|Sphingobacteriia	976|Bacteroidetes	S	C-terminal domain of CHU protein family	-	-	-	-	-	-	-	-	-	-	-	-	CHU_C
BYD3_k127_3267874_0	1122176.KB903565_gene3408	3.316e-218	717.0	COG1470@1|root,COG4886@1|root,COG4935@1|root,COG1470@2|Bacteria,COG4886@2|Bacteria,COG4935@2|Bacteria,4NEN7@976|Bacteroidetes,1IWE5@117747|Sphingobacteriia	976|Bacteroidetes	O	Proprotein convertase P-domain	-	-	-	-	-	-	-	-	-	-	-	-	P_proprotein,Reprolysin_4
BYD3_k127_3298192_0	1121904.ARBP01000007_gene3015	1.388e-239	756.0	COG1132@1|root,COG1132@2|Bacteria,4NHI1@976|Bacteroidetes,47JJQ@768503|Cytophagia	976|Bacteroidetes	V	ATPases associated with a variety of cellular activities	-	-	-	ko:K06147	-	-	-	-	ko00000,ko02000	3.A.1.106,3.A.1.109,3.A.1.21	-	-	ABC_membrane,ABC_tran
BYD3_k127_3298192_1	1250005.PHEL85_0334	8.369e-05	49.0	COG3595@1|root,COG3595@2|Bacteria,4NEUW@976|Bacteroidetes,1HYD6@117743|Flavobacteriia,3VX03@52959|Polaribacter	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_3324318_6	1086011.HJ01_00033	9.792e-37	149.0	2A7VE@1|root,30WUS@2|Bacteria,4PA7S@976|Bacteroidetes,1IDUX@117743|Flavobacteriia,2NZ9K@237|Flavobacterium	976|Bacteroidetes	S	CHAD domain	-	-	-	-	-	-	-	-	-	-	-	-	CHAD
BYD3_k127_3324318_3	760192.Halhy_1313	8.005e-61	212.0	28NYH@1|root,2ZBVN@2|Bacteria,4NMB2@976|Bacteroidetes,1ISFT@117747|Sphingobacteriia	976|Bacteroidetes	S	Belongs to the UPF0403 family	yqiW	-	-	-	-	-	-	-	-	-	-	-	Disulph_isomer
BYD3_k127_3324318_1	926562.Oweho_0959	3.954e-106	350.0	COG2103@1|root,COG2103@2|Bacteria,4NEPY@976|Bacteroidetes,1HXU4@117743|Flavobacteriia,2PA99@246874|Cryomorphaceae	976|Bacteroidetes	H	Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate	murQ	-	4.2.1.126	ko:K07106	ko00520,ko01100,map00520,map01100	-	R08555	RC00397,RC00746	ko00000,ko00001,ko01000	-	-	-	SIS
BYD3_k127_3324318_4	1122176.KB903547_gene1108	5.668e-53	195.0	COG3595@1|root,COG3595@2|Bacteria,4NSAQ@976|Bacteroidetes,1ITBV@117747|Sphingobacteriia	976|Bacteroidetes	S	Putative auto-transporter adhesin, head GIN domain	-	-	-	-	-	-	-	-	-	-	-	-	DUF2807
BYD3_k127_3324318_5	760192.Halhy_4157	9.77e-53	195.0	COG0705@1|root,COG0705@2|Bacteria,4NGT3@976|Bacteroidetes,1IYDB@117747|Sphingobacteriia	976|Bacteroidetes	S	Rhomboid family	-	-	-	-	-	-	-	-	-	-	-	-	Rhomboid
BYD3_k127_3324318_2	1122176.KB903534_gene2117	1.575e-81	275.0	COG1435@1|root,COG1435@2|Bacteria,4NE5R@976|Bacteroidetes,1IS2H@117747|Sphingobacteriia	976|Bacteroidetes	F	thymidine kinase	tdk	GO:0003674,GO:0003824,GO:0004797,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006213,GO:0006259,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009120,GO:0009123,GO:0009124,GO:0009157,GO:0009162,GO:0009165,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0018130,GO:0019136,GO:0019205,GO:0019206,GO:0019438,GO:0019637,GO:0034641,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046104,GO:0046125,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0090304,GO:0090407,GO:1901135,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901576,GO:1901657	2.7.1.21	ko:K00857	ko00240,ko00983,ko01100,map00240,map00983,map01100	-	R01567,R02099,R08233	RC00002,RC00017	ko00000,ko00001,ko01000	-	-	-	TK
BYD3_k127_3324318_0	1122179.KB890416_gene2731	1.451e-202	646.0	COG0138@1|root,COG0138@2|Bacteria,4NEZD@976|Bacteroidetes,1IP42@117747|Sphingobacteriia	976|Bacteroidetes	F	Bifunctional purine biosynthesis protein PurH	purH	-	2.1.2.3,3.5.4.10	ko:K00602	ko00230,ko00670,ko01100,ko01110,ko01130,ko01523,map00230,map00670,map01100,map01110,map01130,map01523	M00048	R01127,R04560	RC00026,RC00263,RC00456	ko00000,ko00001,ko00002,ko01000,ko04147	-	-	-	AICARFT_IMPCHas,MGS
BYD3_k127_3324405_5	616991.JPOO01000003_gene2628	3.931e-44	164.0	COG0518@1|root,COG0518@2|Bacteria,4NGC3@976|Bacteroidetes,1HZTP@117743|Flavobacteriia	976|Bacteroidetes	F	GMP synthase	-	-	-	-	-	-	-	-	-	-	-	-	GATase
BYD3_k127_3324405_0	1122176.KB903551_gene4269	1.244e-147	473.0	COG0189@1|root,COG0189@2|Bacteria,4NFK1@976|Bacteroidetes,1IR39@117747|Sphingobacteriia	976|Bacteroidetes	HJ	Glutathione synthase	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_3324405_8	929703.KE386491_gene3638	3.708e-33	131.0	COG0296@1|root,COG0296@2|Bacteria,4NSTP@976|Bacteroidetes,47Q8H@768503|Cytophagia	976|Bacteroidetes	G	Glycogen recognition site of AMP-activated protein kinase	-	-	-	-	-	-	-	-	-	-	-	-	AMPK1_CBM,CBM_48
BYD3_k127_3324405_7	760192.Halhy_6119	9.159e-35	150.0	COG0457@1|root,COG2314@1|root,COG0457@2|Bacteria,COG2314@2|Bacteria	2|Bacteria	J	TM2 domain	-	-	-	-	-	-	-	-	-	-	-	-	Pilin,SHOCT,TM2,TerB_C,TerB_N
BYD3_k127_3324405_4	880070.Cycma_3864	6.241e-45	181.0	COG0457@1|root,COG2114@1|root,COG2207@1|root,COG5616@1|root,COG0457@2|Bacteria,COG2114@2|Bacteria,COG2207@2|Bacteria,COG5616@2|Bacteria,4NFW7@976|Bacteroidetes,47N72@768503|Cytophagia	976|Bacteroidetes	K	helix_turn_helix, arabinose operon control protein	-	-	-	-	-	-	-	-	-	-	-	-	ANAPC3,Guanylate_cyc,HTH_18,TPR_19,TPR_8
BYD3_k127_3324405_3	760192.Halhy_0311	1.152e-68	241.0	COG0745@1|root,COG0745@2|Bacteria,4NGNK@976|Bacteroidetes,1ISG6@117747|Sphingobacteriia	976|Bacteroidetes	K	Two component transcriptional regulator, winged helix family	-	-	-	-	-	-	-	-	-	-	-	-	Response_reg,Trans_reg_C
BYD3_k127_3324405_2	760192.Halhy_0310	1.259e-69	253.0	COG0642@1|root,COG2205@2|Bacteria,4NI8C@976|Bacteroidetes,1IWXD@117747|Sphingobacteriia	976|Bacteroidetes	T	PFAM Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase	-	-	2.7.13.3	ko:K07636	ko02020,map02020	M00434	-	-	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	-	-	-	HATPase_c,HisKA
BYD3_k127_3324405_6	1239962.C943_04088	3.025e-39	156.0	28J3Q@1|root,32URP@2|Bacteria,4NT50@976|Bacteroidetes,47R3P@768503|Cytophagia	976|Bacteroidetes	S	Protein of unknown function (Porph_ging)	-	-	-	-	-	-	-	-	-	-	-	-	Porph_ging
BYD3_k127_3324405_1	761193.Runsl_2121	4.268e-146	487.0	COG1629@1|root,COG1629@2|Bacteria,4NF88@976|Bacteroidetes,47JEF@768503|Cytophagia	976|Bacteroidetes	P	Outer membrane protein beta-barrel family	-	-	-	-	-	-	-	-	-	-	-	-	CarbopepD_reg_2,CarboxypepD_reg,OMP_b-brl_3
BYD3_k127_3336116_1	643867.Ftrac_1202	2.441e-108	357.0	COG0183@1|root,COG0183@2|Bacteria,4NE3Q@976|Bacteroidetes,47JS8@768503|Cytophagia	976|Bacteroidetes	I	Belongs to the thiolase family	-	-	2.3.1.9	ko:K00626	ko00071,ko00072,ko00280,ko00310,ko00362,ko00380,ko00620,ko00630,ko00640,ko00650,ko00720,ko00900,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,ko02020,map00071,map00072,map00280,map00310,map00362,map00380,map00620,map00630,map00640,map00650,map00720,map00900,map01100,map01110,map01120,map01130,map01200,map01212,map02020	M00088,M00095,M00373,M00374,M00375	R00238,R01177	RC00004,RC00326	ko00000,ko00001,ko00002,ko01000,ko04147	-	-	-	Thiolase_C,Thiolase_N
BYD3_k127_3336116_6	700598.Niako_5416	0.0003718	44.0	COG1961@1|root,COG1961@2|Bacteria,4NFJA@976|Bacteroidetes,1IW8Y@117747|Sphingobacteriia	976|Bacteroidetes	L	resolvase domain protein	-	-	-	-	-	-	-	-	-	-	-	-	Recombinase,Resolvase,Zn_ribbon_recom
BYD3_k127_3336116_5	1168034.FH5T_21240	4.121e-21	98.0	COG0724@1|root,COG0724@2|Bacteria,4NT1J@976|Bacteroidetes,2FSSS@200643|Bacteroidia	976|Bacteroidetes	S	RNA recognition motif	-	-	-	-	-	-	-	-	-	-	-	-	RRM_1
BYD3_k127_3336116_0	1122176.KB903531_gene2826	3.641e-191	607.0	COG2148@1|root,COG2148@2|Bacteria,4NFIA@976|Bacteroidetes,1IS31@117747|Sphingobacteriia	976|Bacteroidetes	M	Bacterial sugar transferase	-	-	-	-	-	-	-	-	-	-	-	-	Bac_transf,CoA_binding_3
BYD3_k127_3336116_3	760192.Halhy_1315	7.382e-40	159.0	2FG80@1|root,3484C@2|Bacteria,4P5E2@976|Bacteroidetes	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_3336116_2	1250232.JQNJ01000001_gene3610	5.506e-89	304.0	COG0673@1|root,COG0673@2|Bacteria,4NEC6@976|Bacteroidetes,1HXSP@117743|Flavobacteriia	976|Bacteroidetes	S	Oxidoreductase	-	-	-	-	-	-	-	-	-	-	-	-	GFO_IDH_MocA
BYD3_k127_3336116_4	1250278.JQNQ01000001_gene1187	5.461e-37	145.0	COG0013@1|root,COG0013@2|Bacteria,4NFHW@976|Bacteroidetes,1HXDT@117743|Flavobacteriia	976|Bacteroidetes	J	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain	alaS	GO:0003674,GO:0003824,GO:0004812,GO:0004813,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006412,GO:0006418,GO:0006419,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016597,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0031406,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0036094,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043177,GO:0043412,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576	6.1.1.7	ko:K01872	ko00970,map00970	M00359,M00360	R03038	RC00055,RC00523	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	-	-	-	DHHA1,tRNA-synt_2c,tRNA_SAD
BYD3_k127_3340618_2	641524.ADICYQ_5941	1.325e-62	220.0	COG0817@1|root,COG0817@2|Bacteria,4NDV6@976|Bacteroidetes,47PA6@768503|Cytophagia	976|Bacteroidetes	L	Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group	ruvC	-	3.1.22.4	ko:K01159	ko03440,map03440	-	-	-	ko00000,ko00001,ko01000,ko03400	-	-	-	RuvC
BYD3_k127_3340618_0	1121889.AUDM01000006_gene1583	9.335e-154	497.0	COG1253@1|root,COG1253@2|Bacteria,4NE9R@976|Bacteroidetes,1HZZZ@117743|Flavobacteriia,2NT22@237|Flavobacterium	976|Bacteroidetes	S	Transporter associated domain	corC_1	-	-	ko:K03699	-	-	-	-	ko00000,ko02042	-	-	-	CBS,CorC_HlyC,DUF21
BYD3_k127_3340618_1	1122176.KB903565_gene3251	1.148e-67	239.0	COG3170@1|root,COG3170@2|Bacteria,4NF47@976|Bacteroidetes,1IS3D@117747|Sphingobacteriia	976|Bacteroidetes	NU	Protein of unknown function (DUF3108)	-	-	-	-	-	-	-	-	-	-	-	-	DUF3108
BYD3_k127_3349782_2	552811.Dehly_0442	2.075e-37	150.0	COG3303@1|root,COG3303@2|Bacteria	2|Bacteria	C	Catalyzes the reduction of nitrite to ammonia, consuming six electrons in the process	-	-	-	-	-	-	-	-	-	-	-	-	Cytochrom_c3_2
BYD3_k127_3349782_1	1123057.P872_21265	1.438e-68	243.0	COG3637@1|root,COG3637@2|Bacteria,4NE33@976|Bacteroidetes,47UNC@768503|Cytophagia	976|Bacteroidetes	M	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_3349782_0	376686.Fjoh_3283	1.229e-182	577.0	COG3119@1|root,COG3119@2|Bacteria,4NEBN@976|Bacteroidetes,1HZSK@117743|Flavobacteriia,2NT8T@237|Flavobacterium	976|Bacteroidetes	P	Sulfatase	-	-	3.1.6.1	ko:K01130	ko00140,ko00600,map00140,map00600	-	R03980,R04856	RC00128,RC00231	ko00000,ko00001,ko01000	-	-	-	Sulfatase
BYD3_k127_339684_0	760192.Halhy_4940	3.519e-224	729.0	COG0745@1|root,COG2207@1|root,COG3292@1|root,COG5002@1|root,COG0745@2|Bacteria,COG2207@2|Bacteria,COG3292@2|Bacteria,COG5002@2|Bacteria,4P0IA@976|Bacteroidetes	976|Bacteroidetes	T	histidine kinase-, DNA gyrase B	-	-	-	-	-	-	-	-	-	-	-	-	HATPase_c,HTH_18,HisKA,Reg_prop,Response_reg,Y_Y_Y
BYD3_k127_339684_1	760192.Halhy_4940	1.642e-35	140.0	COG0745@1|root,COG2207@1|root,COG3292@1|root,COG5002@1|root,COG0745@2|Bacteria,COG2207@2|Bacteria,COG3292@2|Bacteria,COG5002@2|Bacteria,4P0IA@976|Bacteroidetes	976|Bacteroidetes	T	histidine kinase-, DNA gyrase B	-	-	-	-	-	-	-	-	-	-	-	-	HATPase_c,HTH_18,HisKA,Reg_prop,Response_reg,Y_Y_Y
BYD3_k127_339912_0	1121481.AUAS01000003_gene4043	2.099e-167	535.0	COG1009@1|root,COG1009@2|Bacteria,4NEBM@976|Bacteroidetes,47M8Q@768503|Cytophagia	976|Bacteroidetes	CP	NADH ubiquinone oxidoreductase subunit 5 (Chain L) multisubunit Na H antiporter, MnhA subunit	nuoL	-	1.6.5.3	ko:K00341	ko00190,ko01100,map00190,map01100	M00144	R11945	RC00061	ko00000,ko00001,ko00002,ko01000	3.D.1	-	-	Proton_antipo_C,Proton_antipo_M,Proton_antipo_N
BYD3_k127_339912_5	992406.RIA_1533	1.047e-35	138.0	COG0713@1|root,COG0713@2|Bacteria,4NTBP@976|Bacteroidetes,1I39R@117743|Flavobacteriia	976|Bacteroidetes	C	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient	nuoK	-	1.6.5.3	ko:K00340	ko00190,ko01100,map00190,map01100	M00144	R11945	RC00061	ko00000,ko00001,ko00002,ko01000	3.D.1	-	-	Oxidored_q2
BYD3_k127_339912_4	700598.Niako_7071	9.043e-45	167.0	COG0839@1|root,COG0839@2|Bacteria,4NP2V@976|Bacteroidetes,1ISVB@117747|Sphingobacteriia	976|Bacteroidetes	C	Belongs to the complex I subunit 6 family	nuoJ	-	1.6.5.3	ko:K00339	ko00190,ko01100,map00190,map01100	M00144	R11945	RC00061	ko00000,ko00001,ko00002,ko01000	3.D.1	-	-	Oxidored_q3
BYD3_k127_339912_3	760192.Halhy_0324	2.02e-78	267.0	COG1143@1|root,COG1143@2|Bacteria,4NI9I@976|Bacteroidetes,1IS7C@117747|Sphingobacteriia	976|Bacteroidetes	C	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient	nuoI	-	1.6.5.3	ko:K00338	ko00190,ko01100,map00190,map01100	M00144	R11945	RC00061	ko00000,ko00001,ko00002,ko01000	3.D.1	-	-	Fer4
BYD3_k127_339912_2	153721.MYP_733	1.341e-151	485.0	COG1005@1|root,COG1005@2|Bacteria,4NGK7@976|Bacteroidetes,47K9J@768503|Cytophagia	976|Bacteroidetes	C	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone	nuoH	-	1.6.5.3	ko:K00337	ko00190,ko01100,map00190,map01100	M00144	R11945	RC00061	ko00000,ko00001,ko00002,ko01000	3.D.1	-	-	NADHdh
BYD3_k127_339912_1	929556.Solca_3734	9.329e-162	513.0	COG1034@1|root,COG1034@2|Bacteria,4NH3P@976|Bacteroidetes,1IR1J@117747|Sphingobacteriia	976|Bacteroidetes	C	PFAM NADH ubiquinone oxidoreductase, subunit G, iron-sulphur binding	nuoG	-	1.6.5.3	ko:K00336	ko00190,ko01100,map00190,map01100	M00144	R11945	RC00061	ko00000,ko00001,ko00002,ko01000	3.D.1	-	-	Fer2_4,NADH-G_4Fe-4S_3
BYD3_k127_3470477_3	929556.Solca_0458	9.686e-45	171.0	COG1413@1|root,COG1413@2|Bacteria	2|Bacteria	C	deoxyhypusine monooxygenase activity	-	-	-	-	-	-	-	-	-	-	-	-	HEAT_2
BYD3_k127_3470477_1	1122176.KB903571_gene4788	3.793e-72	252.0	COG0705@1|root,COG0705@2|Bacteria,4NS52@976|Bacteroidetes,1IQMD@117747|Sphingobacteriia	976|Bacteroidetes	S	Rhomboid family	-	-	-	-	-	-	-	-	-	-	-	-	Rhomboid
BYD3_k127_3470477_2	1121097.JCM15093_1025	2.482e-71	252.0	COG2755@1|root,COG2755@2|Bacteria,4NFN6@976|Bacteroidetes,2FKZ2@200643|Bacteroidia,4AKGA@815|Bacteroidaceae	976|Bacteroidetes	E	GSCFA family	-	-	-	-	-	-	-	-	-	-	-	-	GSCFA
BYD3_k127_3470477_0	1121012.AUKX01000005_gene3623	5.641e-111	364.0	COG0667@1|root,COG0667@2|Bacteria,4NFCN@976|Bacteroidetes,1HWKD@117743|Flavobacteriia,23FR3@178469|Arenibacter	976|Bacteroidetes	C	Aldo/keto reductase family	gpr	-	-	ko:K19265	-	-	-	-	ko00000,ko01000	-	-	-	Aldo_ket_red
BYD3_k127_3471818_3	643867.Ftrac_0973	1.189e-15	81.0	28HA8@1|root,2Z7MQ@2|Bacteria,4NEJD@976|Bacteroidetes,47N7V@768503|Cytophagia	976|Bacteroidetes	S	Domain of unknown function (DUF4835)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4835
BYD3_k127_3471818_0	760192.Halhy_3500	1.811e-56	203.0	COG0299@1|root,COG0299@2|Bacteria,4NNZP@976|Bacteroidetes,1IQHJ@117747|Sphingobacteriia	976|Bacteroidetes	F	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate	purN	-	2.1.2.2	ko:K11175	ko00230,ko00670,ko01100,ko01110,ko01130,map00230,map00670,map01100,map01110,map01130	M00048	R04325,R04326	RC00026,RC00197,RC01128	ko00000,ko00001,ko00002,ko01000	-	-	-	Formyl_trans_N
BYD3_k127_3471818_1	1121859.KB890738_gene2993	4.067e-54	201.0	COG2515@1|root,COG2515@2|Bacteria,4NEP9@976|Bacteroidetes,47JNZ@768503|Cytophagia	976|Bacteroidetes	E	1-aminocyclopropane-1-carboxylate deaminase	acdS	-	3.5.99.7	ko:K01505	ko00270,map00270	-	R00997	RC00419	ko00000,ko00001,ko01000	-	-	-	PALP
BYD3_k127_3471818_4	46429.BV95_03793	0.0006524	42.0	COG1132@1|root,COG1132@2|Bacteria,1MUBM@1224|Proteobacteria,2TQMR@28211|Alphaproteobacteria,2K0VT@204457|Sphingomonadales	204457|Sphingomonadales	V	ABC-type multidrug transport system, ATPase and permease	-	-	-	ko:K06147	-	-	-	-	ko00000,ko02000	3.A.1.106,3.A.1.109,3.A.1.21	-	-	ABC_membrane,ABC_tran
BYD3_k127_3479328_2	1121904.ARBP01000009_gene4366	5.351e-56	199.0	2CKSR@1|root,30RNP@2|Bacteria,4PB67@976|Bacteroidetes,47VAI@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_3479328_3	1121904.ARBP01000009_gene4366	1.649e-43	163.0	2CKSR@1|root,30RNP@2|Bacteria,4PB67@976|Bacteroidetes,47VAI@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_3479328_1	1123248.KB893328_gene932	1.069e-62	229.0	2CYFR@1|root,32T44@2|Bacteria,4P6IN@976|Bacteroidetes,1IZDY@117747|Sphingobacteriia	976|Bacteroidetes	S	Protein of unknown function (DUF998)	-	-	-	-	-	-	-	-	-	-	-	-	DUF998
BYD3_k127_3479328_4	1107311.Q767_10090	3.554e-39	149.0	2E3QV@1|root,32YNP@2|Bacteria,4NX04@976|Bacteroidetes,1I5VK@117743|Flavobacteriia	976|Bacteroidetes	S	Domain of unknown function (DUF1905)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1905
BYD3_k127_3479328_5	1317122.ATO12_15490	9.894e-29	132.0	COG3325@1|root,COG3866@1|root,COG3979@1|root,COG3325@2|Bacteria,COG3866@2|Bacteria,COG3979@2|Bacteria,4PPVV@976|Bacteroidetes,1IKVM@117743|Flavobacteriia,2YIHH@290174|Aquimarina	976|Bacteroidetes	G	Glyco_18	-	-	-	-	-	-	-	-	-	-	-	-	Glyco_hydro_18
BYD3_k127_3479328_0	362418.IW19_24595	8.284e-270	844.0	COG1032@1|root,COG1032@2|Bacteria,4NETM@976|Bacteroidetes,1HZ18@117743|Flavobacteriia,2NSWK@237|Flavobacterium	976|Bacteroidetes	C	Fe-S oxidoreductase	-	-	-	-	-	-	-	-	-	-	-	-	Radical_SAM
BYD3_k127_3479362_2	491205.JARQ01000005_gene1587	0.000224	48.0	COG4886@1|root,COG4886@2|Bacteria,4PB1B@976|Bacteroidetes,1HZE3@117743|Flavobacteriia,3ZQME@59732|Chryseobacterium	976|Bacteroidetes	S	Secretion protein	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_3479362_0	1380600.AUYN01000010_gene883	1.905e-85	295.0	COG0457@1|root,COG0457@2|Bacteria,4NEYK@976|Bacteroidetes,1I0QJ@117743|Flavobacteriia	976|Bacteroidetes	S	Protein of unknown function (DUF2911)	-	-	-	-	-	-	-	-	-	-	-	-	DUF2911,TPR_2,TPR_8
BYD3_k127_3479362_1	1123277.KB893180_gene2481	4.251e-16	85.0	COG4319@1|root,COG4319@2|Bacteria,4NRVE@976|Bacteroidetes,47QDU@768503|Cytophagia	976|Bacteroidetes	S	Domain of unknown function (DUF4440)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4440
BYD3_k127_3548359_1	1122176.KB903541_gene283	4.106e-91	310.0	COG0739@1|root,COG0739@2|Bacteria,4NGHH@976|Bacteroidetes,1IRSG@117747|Sphingobacteriia	976|Bacteroidetes	M	PFAM Peptidase family M23	-	-	-	-	-	-	-	-	-	-	-	-	Peptidase_M23
BYD3_k127_3548359_0	984262.SGRA_2795	1.871e-265	831.0	COG0013@1|root,COG0013@2|Bacteria,4NFHW@976|Bacteroidetes,1INPU@117747|Sphingobacteriia	976|Bacteroidetes	J	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain	alaS	GO:0003674,GO:0003824,GO:0004812,GO:0004813,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006412,GO:0006418,GO:0006419,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016597,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0031406,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0036094,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043177,GO:0043412,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576	6.1.1.7	ko:K01872	ko00970,map00970	M00359,M00360	R03038	RC00055,RC00523	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	-	-	-	DHHA1,tRNA-synt_2c,tRNA_SAD
BYD3_k127_3561332_1	761193.Runsl_3219	6.317e-72	247.0	COG5642@1|root,COG5642@2|Bacteria,4NPG7@976|Bacteroidetes,47SU3@768503|Cytophagia	976|Bacteroidetes	S	Protein of unknown function (DUF2384)	-	-	-	-	-	-	-	-	-	-	-	-	DUF2384
BYD3_k127_3561332_2	761193.Runsl_3218	1.452e-68	235.0	COG5654@1|root,COG5654@2|Bacteria,4NQ91@976|Bacteroidetes,47SA7@768503|Cytophagia	976|Bacteroidetes	S	RES	-	-	-	-	-	-	-	-	-	-	-	-	RES
BYD3_k127_3561332_0	927677.ALVU02000004_gene4738	1.232e-159	534.0	COG3903@1|root,COG3903@2|Bacteria	2|Bacteria	K	ADP binding	-	-	-	-	-	-	-	-	-	-	-	-	AAA_22,DUF4062,NB-ARC,TPR_12
BYD3_k127_3563211_3	1122605.KB893647_gene355	8.424e-77	262.0	COG0259@1|root,COG0259@2|Bacteria,4NFH7@976|Bacteroidetes,1IRWF@117747|Sphingobacteriia	976|Bacteroidetes	H	Catalyzes the oxidation of either pyridoxine 5'- phosphate (PNP) or pyridoxamine 5'-phosphate (PMP) into pyridoxal 5'-phosphate (PLP)	pdxH	-	1.4.3.5	ko:K00275	ko00750,ko01100,ko01120,map00750,map01100,map01120	M00124	R00277,R00278,R01710,R01711	RC00048,RC00116	ko00000,ko00001,ko00002,ko01000	-	-	-	PNP_phzG_C,Putative_PNPOx
BYD3_k127_3563211_2	760192.Halhy_4497	3.498e-87	291.0	COG1595@1|root,COG1595@2|Bacteria,4NF93@976|Bacteroidetes,1IRTH@117747|Sphingobacteriia	976|Bacteroidetes	K	Belongs to the sigma-70 factor family. ECF subfamily	rpoE	-	-	ko:K03088	-	-	-	-	ko00000,ko03021	-	-	-	Sigma70_r2,Sigma70_r4,Sigma70_r4_2
BYD3_k127_3563211_1	760192.Halhy_4498	9.981e-132	429.0	COG0178@1|root,COG0178@2|Bacteria,4NEHM@976|Bacteroidetes,1IQY4@117747|Sphingobacteriia	976|Bacteroidetes	L	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate	uvrA1	-	-	ko:K03701	ko03420,map03420	-	-	-	ko00000,ko00001,ko03400	-	-	-	AAA_21,ABC_tran
BYD3_k127_3563211_0	984262.SGRA_2411	2.93e-141	458.0	COG0178@1|root,COG0178@2|Bacteria,4NEHM@976|Bacteroidetes,1IQY4@117747|Sphingobacteriia	976|Bacteroidetes	L	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate	uvrA1	-	-	ko:K03701	ko03420,map03420	-	-	-	ko00000,ko00001,ko03400	-	-	-	AAA_21,ABC_tran
BYD3_k127_3574505_3	1122179.KB890419_gene54	2.376e-129	420.0	COG5368@1|root,COG5368@2|Bacteria,4NE34@976|Bacteroidetes	976|Bacteroidetes	S	protein conserved in bacteria	-	-	-	-	-	-	-	-	-	-	-	-	Glycoamylase
BYD3_k127_3574505_0	742767.HMPREF9456_02543	3.47e-268	845.0	COG1472@1|root,COG1472@2|Bacteria,4NE90@976|Bacteroidetes,2FMCU@200643|Bacteroidia,22WMM@171551|Porphyromonadaceae	976|Bacteroidetes	G	PFAM Glycosyl hydrolase family 3 C terminal domain	bglX	-	3.2.1.21	ko:K05349	ko00460,ko00500,ko00940,ko01100,ko01110,map00460,map00500,map00940,map01100,map01110	-	R00026,R02558,R02887,R02985,R03527,R04949,R04998,R10035,R10039,R10040	RC00049,RC00059,RC00171,RC00262,RC00397,RC00451,RC00714,RC00746,RC01248	ko00000,ko00001,ko01000	-	GH3	-	Fn3-like,Glyco_hydro_3,Glyco_hydro_3_C
BYD3_k127_3574505_1	760192.Halhy_1118	9.844e-266	850.0	COG1629@1|root,COG4771@2|Bacteria,4P1Z5@976|Bacteroidetes,1J0WH@117747|Sphingobacteriia	976|Bacteroidetes	P	TonB dependent receptor	-	-	-	-	-	-	-	-	-	-	-	-	CarbopepD_reg_2,Plug,TonB_dep_Rec
BYD3_k127_3574505_2	760192.Halhy_1119	1.408e-167	540.0	COG0702@1|root,COG0702@2|Bacteria,4PKHQ@976|Bacteroidetes	976|Bacteroidetes	GM	RagB SusD domain protein	-	-	-	ko:K21572	-	-	-	-	ko00000,ko02000	8.A.46.1,8.A.46.3	-	-	SusD-like_3,SusD_RagB
BYD3_k127_3574505_9	1237149.C900_05654	8.697e-56	199.0	2AYX9@1|root,31R2Z@2|Bacteria,4NNS4@976|Bacteroidetes,47RDY@768503|Cytophagia	976|Bacteroidetes	S	DinB superfamily	-	-	-	-	-	-	-	-	-	-	-	-	DinB_2
BYD3_k127_3574505_8	983544.Lacal_0117	1.175e-64	229.0	COG3510@1|root,COG3510@2|Bacteria,4NMP8@976|Bacteroidetes,1I1WJ@117743|Flavobacteriia	976|Bacteroidetes	V	cephalosporin hydroxylase	-	-	-	-	-	-	-	-	-	-	-	-	CmcI,Methyltransf_24
BYD3_k127_3574505_7	1122176.KB903598_gene4707	1.033e-69	250.0	COG0628@1|root,COG0628@2|Bacteria,4NFHZ@976|Bacteroidetes,1IVAE@117747|Sphingobacteriia	976|Bacteroidetes	S	AI-2E family transporter	-	-	-	-	-	-	-	-	-	-	-	-	AI-2E_transport
BYD3_k127_3574505_10	1121897.AUGO01000007_gene507	4.425e-35	144.0	COG1216@1|root,COG1216@2|Bacteria,4NRM6@976|Bacteroidetes,1I3NR@117743|Flavobacteriia,2NUYU@237|Flavobacterium	976|Bacteroidetes	S	Putative rhamnosyl transferase	-	-	-	-	-	-	-	-	-	-	-	-	Rhamno_transf
BYD3_k127_3574505_4	1499967.BAYZ01000014_gene6384	1.533e-98	335.0	COG1134@1|root,COG1134@2|Bacteria,2NP4S@2323|unclassified Bacteria	2|Bacteria	GM	ATPases associated with a variety of cellular activities	-	-	3.6.3.38	ko:K01990,ko:K09689,ko:K09691	ko02010,map02010	M00249,M00250,M00254	-	-	ko00000,ko00001,ko00002,ko01000,ko02000	3.A.1,3.A.1.101,3.A.1.103	-	-	ABC_tran,Wzt_C
BYD3_k127_3574505_6	1519464.HY22_09130	1.434e-72	254.0	COG1682@1|root,COG1682@2|Bacteria,1FEDR@1090|Chlorobi	1090|Chlorobi	U	ABC-2 type transporter	-	-	-	ko:K09690	ko02010,map02010	M00250	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.103	-	-	ABC2_membrane
BYD3_k127_3574505_5	1313421.JHBV01000026_gene433	1.542e-87	306.0	COG1572@1|root,COG1572@2|Bacteria,4NFAX@976|Bacteroidetes,1IUXA@117747|Sphingobacteriia	976|Bacteroidetes	S	Peptidase family C25	-	-	-	-	-	-	-	-	-	-	-	-	CARDB,FlgD_ig,ILEI,Peptidase_C25
BYD3_k127_3592795_2	1313301.AUGC01000005_gene256	7.359e-44	164.0	COG1752@1|root,COG1752@2|Bacteria,4NERH@976|Bacteroidetes	976|Bacteroidetes	S	esterase of the alpha-beta hydrolase superfamily	-	-	-	ko:K07001	-	-	-	-	ko00000	-	-	-	Patatin
BYD3_k127_3592795_0	1484460.JSWG01000006_gene3008	0.0	1288.0	COG4447@1|root,COG4447@2|Bacteria,4NESU@976|Bacteroidetes,1HXIG@117743|Flavobacteriia	976|Bacteroidetes	G	BNR Asp-box repeat	-	-	-	-	-	-	-	-	-	-	-	-	Sortilin-Vps10
BYD3_k127_3592795_1	1122176.KB903576_gene5011	5.52e-143	472.0	COG4365@1|root,COG4365@2|Bacteria,4NGCF@976|Bacteroidetes,1IP68@117747|Sphingobacteriia	976|Bacteroidetes	S	Belongs to the BshC family	bshC	-	-	ko:K22136	-	-	-	-	ko00000	-	-	-	BshC
BYD3_k127_3592795_3	1123057.P872_00100	5.531e-32	126.0	COG0777@1|root,COG0777@2|Bacteria,4NFMH@976|Bacteroidetes,47JX2@768503|Cytophagia	976|Bacteroidetes	I	Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA	accD	-	2.1.3.15,6.4.1.2	ko:K01963	ko00061,ko00620,ko00640,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00061,map00620,map00640,map00720,map01100,map01110,map01120,map01130,map01200,map01212	M00082,M00376	R00742,R04386	RC00040,RC00253,RC00367	ko00000,ko00001,ko00002,ko01000	-	-	-	Carboxyl_trans
BYD3_k127_3593548_2	760192.Halhy_6124	7.425e-52	209.0	COG4412@1|root,COG4412@2|Bacteria	2|Bacteria	S	peptidase activity, acting on L-amino acid peptides	-	-	3.4.17.22	ko:K07752	-	-	-	-	ko00000,ko01000,ko01002	-	-	-	Cellulase,DUF4859,F5_F8_type_C,FlgD_ig
BYD3_k127_3593548_1	700598.Niako_4928	1.215e-56	209.0	COG2870@1|root,COG2870@2|Bacteria,4NHUV@976|Bacteroidetes,1IQQ3@117747|Sphingobacteriia	976|Bacteroidetes	M	Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose	rfaE	-	2.7.1.167,2.7.7.70	ko:K03272	ko00540,ko01100,map00540,map01100	M00064	R05644,R05646	RC00002,RC00078	ko00000,ko00001,ko00002,ko01000,ko01005	-	-	-	CTP_transf_like,PfkB
BYD3_k127_3593548_0	1270196.JCKI01000005_gene3182	2.065e-81	286.0	COG1519@1|root,COG1519@2|Bacteria,4NESA@976|Bacteroidetes,1IQKA@117747|Sphingobacteriia	976|Bacteroidetes	M	transferase	waaA	-	2.4.99.12,2.4.99.13,2.4.99.14,2.4.99.15	ko:K02527	ko00540,ko01100,map00540,map01100	M00060,M00080	R04658,R05074,R09763	RC00009,RC00077,RC00247	ko00000,ko00001,ko00002,ko01000,ko01003,ko01005	-	GT30	-	Glycos_transf_N
BYD3_k127_3593548_3	760192.Halhy_6283	7.227e-36	146.0	2EA9Q@1|root,334E4@2|Bacteria,4NX5I@976|Bacteroidetes	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_3593548_4	1450525.JATV01000004_gene96	4.586e-33	128.0	COG0451@1|root,COG0451@2|Bacteria,4NEZX@976|Bacteroidetes,1HWT7@117743|Flavobacteriia,2NSCX@237|Flavobacterium	976|Bacteroidetes	GM	dehydratase	-	-	4.2.1.46	ko:K01710	ko00521,ko00523,ko00525,ko01055,ko01130,map00521,map00523,map00525,map01055,map01130	M00793	R06513	RC00402	ko00000,ko00001,ko00002,ko01000	-	-	-	GDP_Man_Dehyd
BYD3_k127_3599632_3	1107311.Q767_03500	1.637e-101	332.0	COG2066@1|root,COG2066@2|Bacteria,4NERJ@976|Bacteroidetes,1HY8V@117743|Flavobacteriia,2NV8N@237|Flavobacterium	976|Bacteroidetes	E	Glutaminase	glsA	GO:0003674,GO:0003824,GO:0004359,GO:0006082,GO:0006520,GO:0006536,GO:0006537,GO:0006541,GO:0006543,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009056,GO:0009058,GO:0009063,GO:0009064,GO:0009065,GO:0009084,GO:0009987,GO:0016053,GO:0016054,GO:0016787,GO:0016810,GO:0016811,GO:0019752,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044281,GO:0044282,GO:0044283,GO:0046394,GO:0046395,GO:0071704,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576,GO:1901605,GO:1901606,GO:1901607	3.5.1.2	ko:K01425	ko00220,ko00250,ko00471,ko01100,ko04724,ko04727,ko04964,ko05206,ko05230,map00220,map00250,map00471,map01100,map04724,map04727,map04964,map05206,map05230	-	R00256,R01579	RC00010,RC02798	ko00000,ko00001,ko01000	-	-	-	Glutaminase
BYD3_k127_3599632_1	700598.Niako_2130	2.465e-157	510.0	COG3170@1|root,COG3170@2|Bacteria,4P04E@976|Bacteroidetes	976|Bacteroidetes	NU	Tfp pilus assembly protein FimV	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_3599632_0	1121373.KB903665_gene3093	2.193e-159	510.0	COG2159@1|root,COG2159@2|Bacteria,4P1VU@976|Bacteroidetes	976|Bacteroidetes	S	Amidohydrolase	-	-	-	-	-	-	-	-	-	-	-	-	Amidohydro_2
BYD3_k127_3599632_2	1267533.KB906738_gene2197	1.991e-119	394.0	COG3515@1|root,COG3515@2|Bacteria,3Y6SG@57723|Acidobacteria	57723|Acidobacteria	S	Protein conserved in bacteria	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_3605333_1	926549.KI421517_gene1152	8.278e-43	169.0	COG3291@1|root,COG3291@2|Bacteria,4NGRJ@976|Bacteroidetes,47JD6@768503|Cytophagia	976|Bacteroidetes	O	PFAM Pregnancy-associated plasma protein-A	-	-	-	-	-	-	-	-	-	-	-	-	PKD,Peptidase_M43,fn3
BYD3_k127_3605333_3	1122176.KB903576_gene5000	2.561e-09	67.0	COG0666@1|root,COG0666@2|Bacteria	2|Bacteria	G	response to abiotic stimulus	-	-	2.8.1.1,2.8.1.2	ko:K01011,ko:K06867	ko00270,ko00920,ko01100,ko01120,ko04122,map00270,map00920,map01100,map01120,map04122	-	R01931,R03105,R03106	RC00214	ko00000,ko00001,ko01000	-	-	-	Ank_2,Ank_3,Ank_4,Ank_5,Rhodanese
BYD3_k127_3605333_0	760192.Halhy_4953	6.127e-175	557.0	COG0025@1|root,COG0025@2|Bacteria,4NMV8@976|Bacteroidetes	976|Bacteroidetes	P	Sodium/hydrogen exchanger family	-	-	-	-	-	-	-	-	-	-	-	-	Na_H_Exchanger
BYD3_k127_3605333_2	226186.BT_4574	1.176e-22	101.0	COG0239@1|root,COG0239@2|Bacteria,4NV3N@976|Bacteroidetes,2FUP5@200643|Bacteroidia,4AR5I@815|Bacteroidaceae	976|Bacteroidetes	D	Important for reducing fluoride concentration in the cell, thus reducing its toxicity	crcB	GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006820,GO:0008150,GO:0008509,GO:0015075,GO:0015103,GO:0015318,GO:0015698,GO:0016020,GO:0016021,GO:0022857,GO:0031224,GO:0031226,GO:0034220,GO:0044425,GO:0044459,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071944,GO:0098656,GO:0098660,GO:0098661,GO:1903424,GO:1903425	-	ko:K06199	-	-	-	-	ko00000,ko02000	1.A.43.1,1.A.43.2,1.A.43.3	-	-	CRCB
BYD3_k127_3609261_1	1492737.FEM08_06400	6.911e-17	84.0	COG2010@1|root,COG2010@2|Bacteria,4PCRX@976|Bacteroidetes,1IDAA@117743|Flavobacteriia,2NXVD@237|Flavobacterium	976|Bacteroidetes	C	Cytochrome c	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_3609261_0	1453500.AT05_08550	3.178e-97	359.0	COG1572@1|root,COG2911@1|root,COG1572@2|Bacteria,COG2911@2|Bacteria,4NIU0@976|Bacteroidetes,1HXV1@117743|Flavobacteriia	976|Bacteroidetes	S	Parallel beta-helix repeats	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_3636395_1	760192.Halhy_1685	1.932e-35	141.0	COG1595@1|root,COG1595@2|Bacteria,4NQCH@976|Bacteroidetes,1ISH7@117747|Sphingobacteriia	976|Bacteroidetes	K	COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog	-	-	-	ko:K03088	-	-	-	-	ko00000,ko03021	-	-	-	Sigma70_r2,Sigma70_r4_2
BYD3_k127_3636395_0	945713.IALB_3112	0.0	1283.0	COG0793@1|root,COG4946@1|root,COG0793@2|Bacteria,COG4946@2|Bacteria	2|Bacteria	M	serine-type peptidase activity	-	-	-	ko:K08676	-	-	-	-	ko00000,ko01000,ko01002	-	-	-	PD40,Peptidase_S41,Tricorn_C1,Tricorn_PDZ
BYD3_k127_3691109_0	179408.Osc7112_0622	7.331e-61	237.0	COG1075@1|root,COG4249@1|root,COG1075@2|Bacteria,COG4249@2|Bacteria,1G42B@1117|Cyanobacteria,1H7VS@1150|Oscillatoriales	1117|Cyanobacteria	S	Caspase domain	-	-	-	-	-	-	-	-	-	-	-	-	LCAT,Peptidase_C14
BYD3_k127_3750563_9	1032480.MLP_50040	1.242e-07	63.0	COG0265@1|root,COG0265@2|Bacteria,2GJ96@201174|Actinobacteria,4DNEM@85009|Propionibacteriales	201174|Actinobacteria	O	Trypsin-like peptidase domain	-	-	-	ko:K08372	ko02020,map02020	-	-	-	ko00000,ko00001,ko01000,ko01002	-	-	-	PDZ_2,Trypsin_2
BYD3_k127_3750563_3	760192.Halhy_2162	6.151e-62	238.0	COG4219@1|root,COG4219@2|Bacteria,4NKKC@976|Bacteroidetes,1INTG@117747|Sphingobacteriia	976|Bacteroidetes	KT	PFAM Peptidase M56, BlaR1	-	-	-	-	-	-	-	-	-	-	-	-	Peptidase_M56
BYD3_k127_3750563_8	1122176.KB903565_gene3417	6.027e-39	149.0	COG3682@1|root,COG3682@2|Bacteria,4NSQR@976|Bacteroidetes,1ISTV@117747|Sphingobacteriia	976|Bacteroidetes	K	Transcriptional repressor, CopY family	-	-	-	-	-	-	-	-	-	-	-	-	Penicillinase_R
BYD3_k127_3750563_6	1123248.KB893318_gene4157	2.549e-47	179.0	COG3137@1|root,COG3137@2|Bacteria,4NJH6@976|Bacteroidetes,1IYT0@117747|Sphingobacteriia	976|Bacteroidetes	M	Protein of unknown function, DUF481	-	-	-	-	-	-	-	-	-	-	-	-	DUF481
BYD3_k127_3750563_7	1122176.KB903542_gene405	7.007e-40	158.0	COG1011@1|root,COG1011@2|Bacteria	2|Bacteria	S	phosphatase activity	-	-	-	ko:K07025	-	-	-	-	ko00000	-	-	-	HAD_2
BYD3_k127_3750563_2	1047013.AQSP01000089_gene1181	1.903e-98	347.0	COG0457@1|root,COG2114@1|root,COG5616@1|root,COG0457@2|Bacteria,COG2114@2|Bacteria,COG5616@2|Bacteria	2|Bacteria	S	cAMP biosynthetic process	cyaJ	-	4.6.1.1	ko:K01768,ko:K02483	ko00230,ko02025,ko04113,ko04213,map00230,map02025,map04113,map04213	M00695	R00089,R00434	RC00295	ko00000,ko00001,ko00002,ko01000,ko02022	-	-	-	Guanylate_cyc,HTH_18,TPR_16,TPR_19,TPR_2,TPR_8
BYD3_k127_3750563_5	1121904.ARBP01000011_gene1488	1.005e-55	199.0	COG2350@1|root,COG2350@2|Bacteria,4NNMS@976|Bacteroidetes,47RAX@768503|Cytophagia	976|Bacteroidetes	S	YCII-related domain	-	-	-	-	-	-	-	-	-	-	-	-	YCII
BYD3_k127_3750563_0	1168034.FH5T_20355	1.996e-308	962.0	COG0308@1|root,COG0308@2|Bacteria,4NE13@976|Bacteroidetes	976|Bacteroidetes	E	Aminopeptidase	-	-	-	-	-	-	-	-	-	-	-	-	Peptidase_M1
BYD3_k127_3750563_4	926549.KI421517_gene1261	1.252e-58	211.0	COG0639@1|root,COG0639@2|Bacteria,4NEQW@976|Bacteroidetes,47QQR@768503|Cytophagia	976|Bacteroidetes	T	Calcineurin-like phosphoesterase	-	-	3.1.3.16	ko:K07313	-	-	-	-	ko00000,ko01000	-	-	-	Metallophos
BYD3_k127_3750563_1	515635.Dtur_0894	4.079e-127	415.0	COG3842@1|root,COG3842@2|Bacteria	2|Bacteria	P	ATPase activity	msmX	-	-	ko:K10112	ko02010,map02010	M00194,M00196,M00197,M00200,M00201,M00206,M00207,M00491,M00602,M00605,M00606	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.1	-	-	ABC_tran,TOBE,TOBE_2
BYD3_k127_3751706_4	760192.Halhy_3186	7.303e-41	158.0	COG0671@1|root,COG0671@2|Bacteria,4NUPJ@976|Bacteroidetes,1IUI6@117747|Sphingobacteriia	976|Bacteroidetes	I	phosphoesterase, PA-phosphatase related	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_3751706_2	153721.MYP_2527	1.271e-66	250.0	COG0457@1|root,COG0457@2|Bacteria,4NJEF@976|Bacteroidetes,47Q7U@768503|Cytophagia	976|Bacteroidetes	S	Tetratricopeptide repeat	-	-	-	-	-	-	-	-	-	-	-	-	PMT_2,TPR_1,TPR_16,TPR_2,TPR_8
BYD3_k127_3751706_3	1122176.KB903542_gene363	2.322e-50	190.0	2AZ5E@1|root,31RC3@2|Bacteria,4NYUC@976|Bacteroidetes	976|Bacteroidetes	S	Outer membrane protein beta-barrel domain	-	-	-	-	-	-	-	-	-	-	-	-	OMP_b-brl_2
BYD3_k127_3751706_5	1122176.KB903542_gene362	1.782e-36	142.0	COG0454@1|root,COG0456@2|Bacteria,4NTGH@976|Bacteroidetes	976|Bacteroidetes	K	Acetyltransferase (GNAT) family	-	-	-	-	-	-	-	-	-	-	-	-	Acetyltransf_1
BYD3_k127_3751706_0	1122176.KB903556_gene4072	2.554e-128	434.0	COG2885@1|root,COG2885@2|Bacteria,4NE6G@976|Bacteroidetes	976|Bacteroidetes	M	Belongs to the ompA family	-	-	-	-	-	-	-	-	-	-	-	-	CarboxypepD_reg,OmpA,PD40
BYD3_k127_3751706_1	1122176.KB903556_gene4073	1.256e-69	248.0	COG3064@1|root,COG3064@2|Bacteria,4NEVD@976|Bacteroidetes,1IPUG@117747|Sphingobacteriia	976|Bacteroidetes	M	Type IX secretion system membrane protein PorP/SprF	-	-	-	-	-	-	-	-	-	-	-	-	PorP_SprF
BYD3_k127_3751706_6	1122179.KB890416_gene2681	1.231e-27	113.0	COG2304@1|root,COG2866@1|root,COG3291@1|root,COG4386@1|root,COG2304@2|Bacteria,COG2866@2|Bacteria,COG3291@2|Bacteria,COG4386@2|Bacteria,4P3B4@976|Bacteroidetes	976|Bacteroidetes	O	Immunoglobulin like	-	-	-	-	-	-	-	-	-	-	-	-	CHU_C,HYR
BYD3_k127_3787288_3	1046627.BZARG_2681	5.222e-13	69.0	2EAK8@1|root,334NX@2|Bacteria,4NWMB@976|Bacteroidetes,1I5BV@117743|Flavobacteriia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_3787288_0	391598.FBBAL38_02110	4.961e-274	851.0	COG0446@1|root,COG0446@2|Bacteria,4NFUW@976|Bacteroidetes,1HY2U@117743|Flavobacteriia	976|Bacteroidetes	S	Pyridine nucleotide-disulphide oxidoreductase	-	-	1.8.5.4	ko:K17218	ko00920,map00920	-	R10152	RC03155	ko00000,ko00001,ko01000	-	-	-	Pyr_redox_2
BYD3_k127_3787288_1	1484460.JSWG01000010_gene3193	2.349e-121	392.0	COG0450@1|root,COG0450@2|Bacteria,4NEZZ@976|Bacteroidetes,1I036@117743|Flavobacteriia	976|Bacteroidetes	O	PFAM C-terminal domain of 1-Cys peroxiredoxin	-	-	1.11.1.15	ko:K03386	ko04214,map04214	-	-	-	ko00000,ko00001,ko01000,ko04147	-	-	-	1-cysPrx_C,AhpC-TSA
BYD3_k127_3787288_2	886377.Murru_1598	2.615e-27	119.0	COG2010@1|root,COG2010@2|Bacteria,4NIRV@976|Bacteroidetes,1HX5S@117743|Flavobacteriia	976|Bacteroidetes	C	Cytochrome c	-	-	-	-	-	-	-	-	-	-	-	-	Cytochrom_C,DUF3365
BYD3_k127_3796835_1	925409.KI911562_gene1725	1.627e-89	303.0	COG4244@1|root,COG4244@2|Bacteria,4NRDG@976|Bacteroidetes,1IT23@117747|Sphingobacteriia	976|Bacteroidetes	S	Membrane	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_3796835_0	1123276.KB893311_gene3165	0.0	1481.0	COG3696@1|root,COG3696@2|Bacteria,4P36A@976|Bacteroidetes,47JFH@768503|Cytophagia	976|Bacteroidetes	P	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family	-	-	-	ko:K07239	-	-	-	-	ko00000	2.A.6.1	-	-	ACR_tran
BYD3_k127_3796835_4	1341181.FLJC2902T_28920	0.0007075	52.0	COG1404@1|root,COG1404@2|Bacteria,4NQT1@976|Bacteroidetes,1I39G@117743|Flavobacteriia,2NV32@237|Flavobacterium	976|Bacteroidetes	O	Subtilase family	-	-	-	-	-	-	-	-	-	-	-	-	Peptidase_S8
BYD3_k127_3796835_2	1094466.KQS_06590	2.32e-63	236.0	COG2304@1|root,COG3291@1|root,COG2304@2|Bacteria,COG3291@2|Bacteria,4NDZC@976|Bacteroidetes,1IJ8A@117743|Flavobacteriia,2P0KQ@237|Flavobacterium	976|Bacteroidetes	M	Pkd domain containing protein	-	-	-	-	-	-	-	-	-	-	-	-	CHU_C,Gal_Lectin,HYR,Laminin_G_3,PKD,SprB,TSP_3
BYD3_k127_3796835_3	1094466.KQS_06590	2.25e-54	203.0	COG2304@1|root,COG3291@1|root,COG2304@2|Bacteria,COG3291@2|Bacteria,4NDZC@976|Bacteroidetes,1IJ8A@117743|Flavobacteriia,2P0KQ@237|Flavobacterium	976|Bacteroidetes	M	Pkd domain containing protein	-	-	-	-	-	-	-	-	-	-	-	-	CHU_C,Gal_Lectin,HYR,Laminin_G_3,PKD,SprB,TSP_3
BYD3_k127_3804881_0	1313421.JHBV01000016_gene5693	4.127e-197	638.0	COG4232@1|root,COG4232@2|Bacteria,4NEW6@976|Bacteroidetes,1IQXN@117747|Sphingobacteriia	976|Bacteroidetes	CO	Cytochrome c biogenesis protein transmembrane region	dsbD	-	1.8.1.8	ko:K04084	-	-	-	-	ko00000,ko01000,ko03110	5.A.1.1	-	-	DsbC,DsbD,Thioredoxin_7
BYD3_k127_3831397_4	1122176.KB903531_gene2801	3.222e-73	250.0	COG2010@1|root,COG2010@2|Bacteria,4NEX9@976|Bacteroidetes,1ITKW@117747|Sphingobacteriia	976|Bacteroidetes	C	Quinol cytochrome c oxidoreductase	actD	-	-	-	-	-	-	-	-	-	-	-	DUF3341
BYD3_k127_3831397_1	1122176.KB903531_gene2802	3.592e-259	804.0	COG5557@1|root,COG5557@2|Bacteria,4NE3X@976|Bacteroidetes,1INKZ@117747|Sphingobacteriia	976|Bacteroidetes	C	PFAM Polysulphide reductase, NrfD	nrfD	-	-	ko:K00185	-	-	-	-	ko00000	5.A.3	-	-	NrfD
BYD3_k127_3831397_0	1122176.KB903531_gene2803	0.0	1150.0	COG0243@1|root,COG0437@1|root,COG0243@2|Bacteria,COG0437@2|Bacteria,4NE5M@976|Bacteroidetes,1IPWZ@117747|Sphingobacteriia	976|Bacteroidetes	C	Oxidoreductase	nrfC	-	-	ko:K00184	-	-	-	-	ko00000	5.A.3	-	-	Fer4_7,Molydop_binding
BYD3_k127_3831397_2	1122176.KB903531_gene2804	4.541e-178	569.0	COG2010@1|root,COG2010@2|Bacteria,4NF0A@976|Bacteroidetes,1IPBV@117747|Sphingobacteriia	976|Bacteroidetes	C	PFAM Cytochrome c, class I	actA	-	-	-	-	-	-	-	-	-	-	-	Cytochrom_C,Cytochrom_CIII,Cytochrome_C7
BYD3_k127_3831397_3	1196031.ALEG01000005_gene5649	1.845e-143	457.0	COG0207@1|root,COG0207@2|Bacteria,1TSIR@1239|Firmicutes,4H9QS@91061|Bacilli,1ZAUT@1386|Bacillus	91061|Bacilli	F	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis	thyA	GO:0003674,GO:0003824,GO:0004799,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0009058,GO:0009117,GO:0009165,GO:0009262,GO:0009263,GO:0009265,GO:0009394,GO:0009987,GO:0016740,GO:0016741,GO:0018130,GO:0019438,GO:0019637,GO:0019692,GO:0032259,GO:0034641,GO:0034654,GO:0042083,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046385,GO:0046483,GO:0055086,GO:0071704,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901576	2.1.1.45	ko:K00560	ko00240,ko00670,ko01100,ko01523,map00240,map00670,map01100,map01523	M00053	R02101	RC00219,RC00332	ko00000,ko00001,ko00002,ko01000	-	-	-	Thymidylat_synt
BYD3_k127_3831397_5	1210884.HG799472_gene14889	2.917e-09	68.0	COG0500@1|root,COG2226@2|Bacteria,2IZB5@203682|Planctomycetes	203682|Planctomycetes	Q	Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT)	-	-	-	-	-	-	-	-	-	-	-	-	Methyltransf_25,Methyltransf_31
BYD3_k127_3846815_2	1122605.KB893627_gene2990	3.344e-68	233.0	COG0505@1|root,COG0505@2|Bacteria,4NEQI@976|Bacteroidetes,1IPSN@117747|Sphingobacteriia	976|Bacteroidetes	F	Belongs to the CarA family	carA	-	6.3.5.5	ko:K01956	ko00240,ko00250,ko01100,map00240,map00250,map01100	M00051	R00256,R00575,R01395,R10948,R10949	RC00002,RC00010,RC00043,RC02750,RC02798,RC03314	ko00000,ko00001,ko00002,ko01000	-	-	-	CPSase_sm_chain,GATase
BYD3_k127_3846815_0	1122176.KB903532_gene2578	3.824e-163	520.0	COG0148@1|root,COG0148@2|Bacteria,4NF5M@976|Bacteroidetes,1IP9V@117747|Sphingobacteriia	976|Bacteroidetes	G	Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis	eno	-	4.2.1.11	ko:K01689	ko00010,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko03018,ko04066,map00010,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map03018,map04066	M00001,M00002,M00003,M00346,M00394	R00658	RC00349	ko00000,ko00001,ko00002,ko01000,ko03019,ko04147	-	-	-	Enolase_C,Enolase_N
BYD3_k127_3846815_3	1313421.JHBV01000030_gene2106	6.934e-27	110.0	COG0148@1|root,COG0148@2|Bacteria,4NF5M@976|Bacteroidetes,1IP9V@117747|Sphingobacteriia	976|Bacteroidetes	G	Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis	eno	-	4.2.1.11	ko:K01689	ko00010,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko03018,ko04066,map00010,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map03018,map04066	M00001,M00002,M00003,M00346,M00394	R00658	RC00349	ko00000,ko00001,ko00002,ko01000,ko03019,ko04147	-	-	-	Enolase_C,Enolase_N
BYD3_k127_3846815_4	760192.Halhy_4778	2.11e-13	76.0	COG2919@1|root,COG2919@2|Bacteria,4NURQ@976|Bacteroidetes,1IU1T@117747|Sphingobacteriia	976|Bacteroidetes	D	Septum formation initiator	-	-	-	-	-	-	-	-	-	-	-	-	DivIC
BYD3_k127_3846815_1	1121904.ARBP01000028_gene1700	3.06e-142	455.0	COG0074@1|root,COG0074@2|Bacteria,4NE6B@976|Bacteroidetes,47K03@768503|Cytophagia	976|Bacteroidetes	C	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit	sucD	-	6.2.1.5	ko:K01902	ko00020,ko00640,ko00660,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00640,map00660,map00720,map01100,map01110,map01120,map01130,map01200	M00009,M00011,M00173,M00374,M00620	R00405,R02404	RC00004,RC00014	ko00000,ko00001,ko00002,ko01000	-	-	-	CoA_binding,Ligase_CoA,Succ_CoA_lig
BYD3_k127_3880963_0	1392490.JHZX01000001_gene3180	8.207e-145	471.0	COG0471@1|root,COG0471@2|Bacteria,4NFDK@976|Bacteroidetes,1HX3U@117743|Flavobacteriia	976|Bacteroidetes	P	COG0471 Di- and tricarboxylate	-	-	-	ko:K14445	-	-	-	-	ko00000,ko02000	2.A.47.1	-	-	Na_sulph_symp
BYD3_k127_3880963_2	1122176.KB903534_gene2192	3.39e-99	332.0	COG0741@1|root,COG0741@2|Bacteria,4NH4W@976|Bacteroidetes,1IRYG@117747|Sphingobacteriia	976|Bacteroidetes	M	transglycosylase	mltD_2	-	-	-	-	-	-	-	-	-	-	-	SLT
BYD3_k127_3880963_4	316274.Haur_3938	5.13e-72	251.0	COG1940@1|root,COG1940@2|Bacteria,2G7NH@200795|Chloroflexi,376TI@32061|Chloroflexia	32061|Chloroflexia	GK	ROK family	-	-	2.7.1.63	ko:K00886	ko00010,ko00520,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00520,map01100,map01110,map01120,map01130,map01200	M00001,M00549	R02187,R02189	RC00017	ko00000,ko00001,ko00002,ko01000	-	-	-	ROK
BYD3_k127_3880963_3	760192.Halhy_2149	1.408e-87	298.0	COG0652@1|root,COG3291@1|root,COG0652@2|Bacteria,COG3291@2|Bacteria,4NGT6@976|Bacteroidetes,1IQXS@117747|Sphingobacteriia	976|Bacteroidetes	O	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides	-	-	5.2.1.8	ko:K03768	-	-	-	-	ko00000,ko01000,ko03110	-	-	-	PKD,Pro_isomerase
BYD3_k127_3880963_5	1122176.KB903550_gene4304	1.279e-62	223.0	COG0652@1|root,COG0652@2|Bacteria,4NGT6@976|Bacteroidetes,1IRYC@117747|Sphingobacteriia	976|Bacteroidetes	M	Peptidyl-prolyl cis-trans isomerase	-	-	5.2.1.8	ko:K03768	-	-	-	-	ko00000,ko01000,ko03110	-	-	-	Pro_isomerase
BYD3_k127_3880963_6	760192.Halhy_2150	1.896e-41	158.0	29D8R@1|root,3006P@2|Bacteria,4NNGD@976|Bacteroidetes,1ISQF@117747|Sphingobacteriia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_3880963_1	760192.Halhy_4319	5.056e-101	333.0	COG0047@1|root,COG0047@2|Bacteria,4NFER@976|Bacteroidetes,1IRA4@117747|Sphingobacteriia	976|Bacteroidetes	F	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL	purQ	-	6.3.5.3	ko:K01952	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	M00048	R04463	RC00010,RC01160	ko00000,ko00001,ko00002,ko01000	-	-	-	GATase_5
BYD3_k127_3880963_7	1121912.AUHD01000005_gene1604	4.111e-14	75.0	COG4232@1|root,COG4232@2|Bacteria,4NEW6@976|Bacteroidetes,1HX34@117743|Flavobacteriia	976|Bacteroidetes	CO	Thiol disulfide interchange protein	-	-	1.8.1.8	ko:K04084	-	-	-	-	ko00000,ko01000,ko03110	5.A.1.1	-	-	DsbC,DsbD,Thioredoxin_7
BYD3_k127_3884311_6	330214.NIDE2229	2.405e-19	92.0	2CI52@1|root,2ZC5H@2|Bacteria	2|Bacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_3884311_1	485913.Krac_5970	2.486e-168	550.0	COG0464@1|root,COG0464@2|Bacteria,2G67S@200795|Chloroflexi	200795|Chloroflexi	O	PFAM AAA ATPase central domain protein	-	-	-	-	-	-	-	-	-	-	-	-	AAA
BYD3_k127_3884311_3	324602.Caur_2160	1.637e-99	340.0	28PII@1|root,2ZC8H@2|Bacteria,2G926@200795|Chloroflexi,377FI@32061|Chloroflexia	32061|Chloroflexia	S	Protein of unknown function (DUF4255)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4255
BYD3_k127_3884311_5	1122599.AUGR01000019_gene3078	2.913e-49	184.0	2AAD4@1|root,30ZP1@2|Bacteria,1NBWF@1224|Proteobacteria,1SB2S@1236|Gammaproteobacteria	1236|Gammaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_3884311_4	926550.CLDAP_40730	5.016e-99	325.0	2DB76@1|root,2Z7JZ@2|Bacteria,2G5SJ@200795|Chloroflexi	200795|Chloroflexi	S	T4-like virus tail tube protein gp19	-	-	-	-	-	-	-	-	-	-	-	-	Phage_T4_gp19
BYD3_k127_3884311_0	237368.SCABRO_00855	3.323e-197	634.0	COG3497@1|root,COG3497@2|Bacteria,2IXRX@203682|Planctomycetes	203682|Planctomycetes	S	Phage tail sheath C-terminal domain	-	-	-	-	-	-	-	-	-	-	-	-	Phage_sheath_1,Phage_sheath_1C
BYD3_k127_3884311_2	1122599.AUGR01000019_gene3071	2.146e-136	447.0	COG1404@1|root,COG4935@1|root,COG1404@2|Bacteria,COG4935@2|Bacteria	2|Bacteria	O	Belongs to the peptidase S8 family	prcA	-	3.4.21.121	ko:K20755	-	-	-	-	ko00000,ko01000,ko01002	-	-	-	FTP,P_proprotein,PepSY,Peptidase_M4,Peptidase_M4_C,Peptidase_S8
BYD3_k127_3893373_1	1121481.AUAS01000018_gene477	5.996e-64	227.0	COG3279@1|root,COG3279@2|Bacteria,4NK6R@976|Bacteroidetes,47XDW@768503|Cytophagia	976|Bacteroidetes	T	Two component transcriptional regulator, LytTR family	-	-	-	ko:K02477	-	-	-	-	ko00000,ko02022	-	-	-	LytTR,Response_reg
BYD3_k127_3893373_0	471854.Dfer_1503	1.022e-127	451.0	COG1956@1|root,COG2972@1|root,COG3292@1|root,COG1956@2|Bacteria,COG2972@2|Bacteria,COG3292@2|Bacteria,4NHMQ@976|Bacteroidetes,47P3A@768503|Cytophagia	976|Bacteroidetes	T	Histidine kinase	-	-	-	-	-	-	-	-	-	-	-	-	GAF_2,His_kinase,Reg_prop,Y_Y_Y
BYD3_k127_3941374_1	1123276.KB893269_gene4804	1.019e-08	68.0	COG4206@1|root,COG4206@2|Bacteria,4NI2R@976|Bacteroidetes,47JRI@768503|Cytophagia	976|Bacteroidetes	H	Putative porin	-	-	-	-	-	-	-	-	-	-	-	-	Porin_10
BYD3_k127_3941374_0	760192.Halhy_1200	6.574e-46	171.0	COG0457@1|root,COG0457@2|Bacteria,4NQR8@976|Bacteroidetes,1ISBH@117747|Sphingobacteriia	976|Bacteroidetes	S	Protein of unknown function (DUF2911)	-	-	-	-	-	-	-	-	-	-	-	-	DUF2911
BYD3_k127_3957632_0	1122176.KB903540_gene121	0.0	1119.0	COG2133@1|root,COG4654@1|root,COG2133@2|Bacteria,COG4654@2|Bacteria,4NEMM@976|Bacteroidetes,1J0A5@117747|Sphingobacteriia	976|Bacteroidetes	CG	PA14	-	-	-	ko:K08738	ko00920,ko01100,ko01120,ko01524,ko02020,ko04115,ko04210,ko04214,ko04215,ko04932,ko05010,ko05012,ko05014,ko05016,ko05134,ko05145,ko05152,ko05161,ko05164,ko05167,ko05168,ko05200,ko05210,ko05222,ko05416,map00920,map01100,map01120,map01524,map02020,map04115,map04210,map04214,map04215,map04932,map05010,map05012,map05014,map05016,map05134,map05145,map05152,map05161,map05164,map05167,map05168,map05200,map05210,map05222,map05416	M00595	R10151	RC03151,RC03152	ko00000,ko00001,ko00002	3.D.4.6	-	-	Cytochrom_C,DUF1080,PA14
BYD3_k127_3977464_5	886379.AEWI01000005_gene996	3.582e-15	79.0	COG1629@1|root,COG1629@2|Bacteria,4NDXS@976|Bacteroidetes,2FKYX@200643|Bacteroidia,3XIZQ@558415|Marinilabiliaceae	976|Bacteroidetes	P	TonB dependent receptor	-	-	-	-	-	-	-	-	-	-	-	-	CarbopepD_reg_2,Plug,TonB_dep_Rec
BYD3_k127_3977464_2	649349.Lbys_0371	4.043e-127	413.0	COG0524@1|root,COG0524@2|Bacteria,4NENQ@976|Bacteroidetes,47MN5@768503|Cytophagia	976|Bacteroidetes	H	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway	rbsK	-	2.7.1.15	ko:K00852	ko00030,map00030	-	R01051,R02750	RC00002,RC00017	ko00000,ko00001,ko01000	-	-	-	PfkB
BYD3_k127_3977464_0	1408473.JHXO01000012_gene338	1.191e-261	813.0	COG3051@1|root,COG3051@2|Bacteria,4NJUR@976|Bacteroidetes,2FRJJ@200643|Bacteroidia	976|Bacteroidetes	C	Citrate lyase, alpha subunit (CitF)	citF	-	-	-	-	-	-	-	-	-	-	-	CitF
BYD3_k127_3977464_1	1499967.BAYZ01000139_gene150	7.758e-163	522.0	COG2301@1|root,COG3052@1|root,COG2301@2|Bacteria,COG3052@2|Bacteria,2NQDZ@2323|unclassified Bacteria	2|Bacteria	G	HpcH/HpaI aldolase/citrate lyase family	citD	GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006091,GO:0006113,GO:0008150,GO:0008152,GO:0008815,GO:0009346,GO:0009987,GO:0015980,GO:0016829,GO:0016830,GO:0016833,GO:0032991,GO:0044237,GO:0044424,GO:0044444,GO:0044464,GO:0055114	4.1.3.25,4.1.3.34	ko:K01644,ko:K01646,ko:K18292	ko00660,ko01100,ko02020,map00660,map01100,map02020	-	R00237,R00362	RC00067,RC00502,RC01118,RC01205	ko00000,ko00001,ko01000	-	-	-	ACP,HpcH_HpaI
BYD3_k127_3977464_3	945713.IALB_2228	5.722e-114	384.0	COG0471@1|root,COG0471@2|Bacteria	2|Bacteria	P	metal ion transport	sdcS	-	-	ko:K14445	-	-	-	-	ko00000,ko02000	2.A.47.1	-	-	Na_sulph_symp
BYD3_k127_3977464_4	649349.Lbys_0370	8.839e-53	193.0	28KQC@1|root,2ZA86@2|Bacteria,4PKWK@976|Bacteroidetes,47YDY@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_3990062_1	1122176.KB903557_gene4052	3.435e-129	434.0	COG1452@1|root,COG1934@1|root,COG1452@2|Bacteria,COG1934@2|Bacteria,4NDU3@976|Bacteroidetes,1IP5G@117747|Sphingobacteriia	976|Bacteroidetes	M	OstA-like protein	lptD	-	-	-	-	-	-	-	-	-	-	-	OstA_2
BYD3_k127_3990062_6	1122176.KB903557_gene4057	6.931e-19	91.0	2AVDM@1|root,31M58@2|Bacteria,4NUN6@976|Bacteroidetes	976|Bacteroidetes	S	Domain of unknown function (DUF4293)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4293
BYD3_k127_3990062_2	1313301.AUGC01000014_gene2483	2.729e-80	278.0	COG0084@1|root,COG0084@2|Bacteria,4NEVW@976|Bacteroidetes	976|Bacteroidetes	L	hydrolase, TatD	tatD	-	-	ko:K03424	-	-	-	-	ko00000,ko01000	-	-	-	TatD_DNase
BYD3_k127_3990062_3	1123008.KB905694_gene1672	5.943e-72	248.0	COG3341@1|root,COG3341@2|Bacteria,4PKFF@976|Bacteroidetes,2G3F9@200643|Bacteroidia,2322B@171551|Porphyromonadaceae	976|Bacteroidetes	L	Caulimovirus viroplasmin	rnhA	-	3.1.26.4	ko:K03469	ko03030,map03030	-	-	-	ko00000,ko00001,ko01000,ko03032	-	-	-	Cauli_VI,RNase_H
BYD3_k127_3990062_4	760192.Halhy_4834	5.087e-67	233.0	COG0242@1|root,COG0242@2|Bacteria,4NFB4@976|Bacteroidetes,1IRF3@117747|Sphingobacteriia	976|Bacteroidetes	J	Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions	def	-	3.5.1.88	ko:K01462	-	-	-	-	ko00000,ko01000	-	-	-	Pep_deformylase
BYD3_k127_3990062_5	667015.Bacsa_1687	3.369e-32	130.0	COG0816@1|root,COG0816@2|Bacteria,4NQ8B@976|Bacteroidetes,2FT2Q@200643|Bacteroidia,4AQK2@815|Bacteroidaceae	976|Bacteroidetes	L	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA	ruvX	GO:0000966,GO:0000967,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0022613,GO:0034470,GO:0034471,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:1901360	-	ko:K07447	-	-	-	-	ko00000,ko01000	-	-	-	RuvX
BYD3_k127_3990062_0	760192.Halhy_3866	7.264e-149	510.0	COG3210@1|root,COG3210@2|Bacteria	2|Bacteria	U	domain, Protein	-	-	-	ko:K20276	ko02024,map02024	-	-	-	ko00000,ko00001	-	-	-	Autotransporter,Beta_helix,Calx-beta,DUF4347,SLH,VCBS
BYD3_k127_4036118_4	1122176.KB903531_gene2783	1.36e-16	81.0	COG1605@1|root,COG2876@1|root,COG1605@2|Bacteria,COG2876@2|Bacteria,4NDU4@976|Bacteroidetes,1IQIZ@117747|Sphingobacteriia	976|Bacteroidetes	E	Dahp synthetase i kdsa	pheB	-	5.4.99.5	ko:K04516	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	M00024,M00025	R01715	RC03116	ko00000,ko00001,ko00002,ko01000	-	-	-	CM_2,DAHP_synth_1
BYD3_k127_4036118_0	1122176.KB903565_gene3379	2.044e-72	265.0	COG2304@1|root,COG2304@2|Bacteria,4PKD0@976|Bacteroidetes,1IXV1@117747|Sphingobacteriia	976|Bacteroidetes	O	Belongs to the peptidase S8 family	-	-	-	-	-	-	-	-	-	-	-	-	CHU_C,HYR,LRR_adjacent
BYD3_k127_4036118_1	945713.IALB_2758	5.548e-55	201.0	COG2197@1|root,COG2197@2|Bacteria	2|Bacteria	K	response regulator	-	-	-	-	-	-	-	-	-	-	-	-	GerE,Response_reg
BYD3_k127_4036118_2	1189612.A33Q_1883	3.867e-36	157.0	COG0457@1|root,COG4585@1|root,COG0457@2|Bacteria,COG4585@2|Bacteria,4NI1V@976|Bacteroidetes,47Q3Z@768503|Cytophagia	976|Bacteroidetes	T	Histidine kinase	-	-	-	-	-	-	-	-	-	-	-	-	HATPase_c,HisKA_3,TPR_10,TPR_12,TPR_8
BYD3_k127_4036118_3	376686.Fjoh_3457	1.612e-27	119.0	2DPNX@1|root,332TS@2|Bacteria,4NQ5N@976|Bacteroidetes,1I3SK@117743|Flavobacteriia,2NWDI@237|Flavobacterium	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_4064327_0	485918.Cpin_6241	2.349e-138	471.0	COG0823@1|root,COG0823@2|Bacteria,4NGPR@976|Bacteroidetes,1IQHQ@117747|Sphingobacteriia	976|Bacteroidetes	U	Involved in the tonB-independent uptake of proteins	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_4064327_2	760192.Halhy_2028	4.207e-91	306.0	COG1646@1|root,COG1646@2|Bacteria,4NER8@976|Bacteroidetes,1IW5Q@117747|Sphingobacteriia	976|Bacteroidetes	I	Prenyltransferase that catalyzes the transfer of the geranylgeranyl moiety of geranylgeranyl diphosphate (GGPP) to the C3 hydroxyl of sn-glycerol-1-phosphate (G1P)	pcrB	-	-	ko:K07094	-	-	-	-	ko00000,ko01000	-	-	-	PcrB
BYD3_k127_4064327_3	760192.Halhy_3502	4.531e-80	286.0	COG1187@1|root,COG1187@2|Bacteria,4NEE1@976|Bacteroidetes,1INNI@117747|Sphingobacteriia	976|Bacteroidetes	J	Belongs to the pseudouridine synthase RsuA family	rluB	-	5.4.99.22	ko:K06178	-	-	-	-	ko00000,ko01000,ko03009	-	-	-	PseudoU_synth_2,S4
BYD3_k127_4064327_1	984262.SGRA_2716	6.433e-116	381.0	COG0305@1|root,COG0305@2|Bacteria,4NF8P@976|Bacteroidetes,1IPIQ@117747|Sphingobacteriia	976|Bacteroidetes	L	Participates in initiation and elongation during chromosome replication	dnaB	-	3.6.4.12	ko:K02314	ko03030,ko04112,map03030,map04112	-	-	-	ko00000,ko00001,ko01000,ko03032	-	-	-	DnaB,DnaB_C
BYD3_k127_4177208_0	1124780.ANNU01000016_gene1837	0.0	1389.0	COG4206@1|root,COG4206@2|Bacteria,4P258@976|Bacteroidetes,47TYR@768503|Cytophagia	976|Bacteroidetes	H	TonB dependent receptor	-	-	-	-	-	-	-	-	-	-	-	-	CarbopepD_reg_2,Plug,TonB_dep_Rec
BYD3_k127_4204056_1	667015.Bacsa_3004	7.049e-19	100.0	COG2755@1|root,COG3250@1|root,COG2755@2|Bacteria,COG3250@2|Bacteria,4NGZH@976|Bacteroidetes,2FNGV@200643|Bacteroidia,4AP9W@815|Bacteroidaceae	976|Bacteroidetes	G	Glycosyl hydrolase family 2, sugar binding domain protein	-	-	-	-	-	-	-	-	-	-	-	-	Glyco_hydro_106,Glyco_hydro_2_N
BYD3_k127_4204056_0	1506583.JQJY01000001_gene506	3.702e-166	540.0	COG5434@1|root,COG5434@2|Bacteria,4NFSC@976|Bacteroidetes,1I1PY@117743|Flavobacteriia,2NSF2@237|Flavobacterium	976|Bacteroidetes	G	Belongs to the glycosyl hydrolase 28 family	-	-	-	-	-	-	-	-	-	-	-	-	Glyco_hydro_28,Pectate_lyase_3
BYD3_k127_4204056_3	1147.D082_13940	1.124e-13	82.0	COG1357@1|root,COG1357@2|Bacteria,1GESC@1117|Cyanobacteria,1H6F2@1142|Synechocystis	1117|Cyanobacteria	S	Pentapeptide repeats (9 copies)	hglK	-	-	-	-	-	-	-	-	-	-	-	Pentapeptide
BYD3_k127_420503_4	485917.Phep_2569	2.511e-11	64.0	COG0436@1|root,COG0436@2|Bacteria,4NENS@976|Bacteroidetes,1INY0@117747|Sphingobacteriia	976|Bacteroidetes	E	PFAM Aminotransferase class I and II	aspC	-	2.6.1.1	ko:K00812	ko00220,ko00250,ko00270,ko00330,ko00350,ko00360,ko00400,ko00401,ko00950,ko00960,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map00250,map00270,map00330,map00350,map00360,map00400,map00401,map00950,map00960,map01100,map01110,map01130,map01210,map01230	-	R00355,R00694,R00734,R00896,R02433,R02619,R05052	RC00006	ko00000,ko00001,ko01000,ko01007	-	-	-	Aminotran_1_2
BYD3_k127_420503_3	760192.Halhy_0189	2.691e-41	169.0	COG0683@1|root,COG0683@2|Bacteria,4PMPE@976|Bacteroidetes,1ISIQ@117747|Sphingobacteriia	976|Bacteroidetes	E	leucine binding	-	-	-	-	-	-	-	-	-	-	-	-	ANF_receptor,LysM,Peripla_BP_6
BYD3_k127_420503_0	760192.Halhy_0188	1.775e-231	726.0	COG0518@1|root,COG0519@1|root,COG0518@2|Bacteria,COG0519@2|Bacteria,4NESX@976|Bacteroidetes,1INX4@117747|Sphingobacteriia	976|Bacteroidetes	F	Catalyzes the synthesis of GMP from XMP	guaA	GO:0003674,GO:0003824,GO:0003921,GO:0003922,GO:0006139,GO:0006163,GO:0006164,GO:0006177,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009163,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0016884,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034404,GO:0034641,GO:0034654,GO:0042278,GO:0042451,GO:0042455,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046037,GO:0046128,GO:0046129,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901068,GO:1901070,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659	6.3.5.2	ko:K01951	ko00230,ko00983,ko01100,map00230,map00983,map01100	M00050	R01230,R01231,R08244	RC00010,RC00204	ko00000,ko00001,ko00002,ko01000,ko01002	-	-	-	GATase,GMP_synt_C,NAD_synthase
BYD3_k127_420503_2	760192.Halhy_6531	4.121e-85	291.0	COG0781@1|root,COG0781@2|Bacteria,4NDVR@976|Bacteroidetes,1ISHE@117747|Sphingobacteriia	976|Bacteroidetes	K	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons	nusB	-	-	ko:K03625	-	-	-	-	ko00000,ko03009,ko03021	-	-	-	NusB
BYD3_k127_420503_1	760192.Halhy_5606	3.648e-131	434.0	COG2259@1|root,COG2259@2|Bacteria,4NGNF@976|Bacteroidetes,1IPIJ@117747|Sphingobacteriia	976|Bacteroidetes	O	DoxX family	doxX	-	-	-	-	-	-	-	-	-	-	-	DoxX
BYD3_k127_4233431_1	1121875.KB907554_gene491	1.805e-57	206.0	COG2353@1|root,COG2353@2|Bacteria,4NMWH@976|Bacteroidetes,1I1TM@117743|Flavobacteriia	976|Bacteroidetes	S	Belongs to the UPF0312 family	yceI	-	-	-	-	-	-	-	-	-	-	-	YceI
BYD3_k127_4233431_2	1121875.KB907546_gene2648	4.303e-53	196.0	COG0289@1|root,COG0289@2|Bacteria,4NDX2@976|Bacteroidetes,1HX1D@117743|Flavobacteriia	976|Bacteroidetes	E	Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate	dapB	-	1.17.1.8	ko:K00215	ko00261,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00261,map00300,map01100,map01110,map01120,map01130,map01230	M00016,M00525,M00526,M00527	R04198,R04199	RC00478	ko00000,ko00001,ko00002,ko01000	-	-	-	DapB_C,DapB_N
BYD3_k127_4233431_0	760192.Halhy_5712	3.948e-154	496.0	COG0358@1|root,COG0358@2|Bacteria,4NENT@976|Bacteroidetes,1IR9Y@117747|Sphingobacteriia	976|Bacteroidetes	L	RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication	dnaG	-	-	ko:K02316	ko03030,map03030	-	-	-	ko00000,ko00001,ko01000,ko03032	-	-	-	DnaB_bind,Toprim_2,Toprim_4,Toprim_N,zf-CHC2
BYD3_k127_423641_2	393480.FNP_1248	0.0007648	49.0	COG3637@1|root,COG3637@2|Bacteria,37AE9@32066|Fusobacteria	32066|Fusobacteria	M	Psort location OuterMembrane, score	-	-	-	-	-	-	-	-	-	-	-	-	OMP_b-brl
BYD3_k127_423641_0	1239962.C943_04087	6.82e-157	499.0	COG0540@1|root,COG0540@2|Bacteria,4NFIU@976|Bacteroidetes,47KS2@768503|Cytophagia	976|Bacteroidetes	F	Belongs to the ATCase OTCase family	pyrB	GO:0003674,GO:0003824,GO:0004070,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006220,GO:0006221,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009165,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0016740,GO:0016741,GO:0016743,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576	2.1.3.2	ko:K00609	ko00240,ko00250,ko01100,map00240,map00250,map01100	M00051	R01397	RC00064,RC02850	ko00000,ko00001,ko00002,ko01000	-	-	-	OTCace,OTCace_N
BYD3_k127_423641_1	760192.Halhy_0997	1.663e-59	211.0	COG2065@1|root,COG2065@2|Bacteria,4NFI1@976|Bacteroidetes,1IQWE@117747|Sphingobacteriia	976|Bacteroidetes	F	uracil phosphoribosyltransferase	pyrR	-	2.4.2.9	ko:K02825	ko00240,ko01100,map00240,map01100	-	R00966	RC00063	ko00000,ko00001,ko01000,ko03000	-	-	-	Pribosyltran
BYD3_k127_4236724_0	1157490.EL26_23050	1.452e-81	285.0	COG0726@1|root,COG0726@2|Bacteria,1VI89@1239|Firmicutes	1239|Firmicutes	G	polysaccharide deacetylase	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_4236724_1	1122176.KB903532_gene2676	1.891e-27	126.0	COG3291@1|root,COG3291@2|Bacteria,4NUFV@976|Bacteroidetes	976|Bacteroidetes	S	PKD domain	-	-	-	-	-	-	-	-	-	-	-	-	PKD
BYD3_k127_4245651_3	760192.Halhy_0789	3.63e-24	106.0	2AF9B@1|root,3158G@2|Bacteria,4PJGK@976|Bacteroidetes,1IZNQ@117747|Sphingobacteriia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_4245651_0	760192.Halhy_0800	1.823e-167	535.0	COG2235@1|root,COG2235@2|Bacteria,4NHKZ@976|Bacteroidetes,1IP21@117747|Sphingobacteriia	976|Bacteroidetes	E	Arginine deiminase	-	-	3.5.3.6	ko:K01478	ko00220,ko01100,ko01110,ko01130,map00220,map01100,map01110,map01130	-	R00552	RC00177	ko00000,ko00001,ko01000	-	-	-	Amidinotransf
BYD3_k127_4245651_2	760192.Halhy_0801	5.771e-41	156.0	COG0824@1|root,COG0824@2|Bacteria,4NQGW@976|Bacteroidetes,1IT5E@117747|Sphingobacteriia	976|Bacteroidetes	S	thioesterase	ybgC	-	-	ko:K07107	-	-	-	-	ko00000,ko01000	-	-	-	4HBT,4HBT_2
BYD3_k127_4245651_1	1122176.KB903538_gene1520	1.274e-63	229.0	COG1295@1|root,COG1295@2|Bacteria,4NFY6@976|Bacteroidetes,1IPC8@117747|Sphingobacteriia	976|Bacteroidetes	S	ribonuclease BN	yfkH	-	-	ko:K07058	-	-	-	-	ko00000	-	-	-	Virul_fac_BrkB
BYD3_k127_4267575_1	1173026.Glo7428_4709	4.984e-70	259.0	28IQZ@1|root,2Z8QK@2|Bacteria,1G30I@1117|Cyanobacteria	1117|Cyanobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_4267575_4	205922.Pfl01_2083	2.221e-40	163.0	COG0644@1|root,COG0644@2|Bacteria,1MZVI@1224|Proteobacteria,1RMNS@1236|Gammaproteobacteria	1236|Gammaproteobacteria	C	oxidoreductase	-	-	-	-	-	-	-	-	-	-	-	-	FAD_binding_3,Trp_halogenase
BYD3_k127_4267575_5	1237149.C900_00011	4.461e-34	138.0	COG3637@1|root,COG3637@2|Bacteria,4NR9K@976|Bacteroidetes,47QK5@768503|Cytophagia	976|Bacteroidetes	M	Outer membrane protein beta-barrel domain	-	-	-	-	-	-	-	-	-	-	-	-	OMP_b-brl,OMP_b-brl_2
BYD3_k127_4267575_2	269798.CHU_3544	2.407e-62	219.0	COG2207@1|root,COG2207@2|Bacteria,4NMXA@976|Bacteroidetes,47VN3@768503|Cytophagia	976|Bacteroidetes	K	helix_turn_helix, arabinose operon control protein	-	-	-	-	-	-	-	-	-	-	-	-	HTH_18
BYD3_k127_4267575_3	1121899.Q764_12615	3.437e-59	208.0	COG0745@1|root,COG0745@2|Bacteria,4NPID@976|Bacteroidetes,1I236@117743|Flavobacteriia,2NUGC@237|Flavobacterium	976|Bacteroidetes	KT	Regulator	-	-	-	-	-	-	-	-	-	-	-	-	Response_reg
BYD3_k127_4267575_0	269798.CHU_3546	3.743e-171	555.0	COG4251@1|root,COG4251@2|Bacteria,4NGXA@976|Bacteroidetes,47NUK@768503|Cytophagia	976|Bacteroidetes	T	signal transduction histidine kinase	-	-	-	-	-	-	-	-	-	-	-	-	CHASE3,HATPase_c,HisKA,PAS_3
BYD3_k127_427912_0	1356852.N008_05325	5.484e-104	355.0	COG3292@1|root,COG4585@1|root,COG3292@2|Bacteria,COG4585@2|Bacteria,4NK8Q@976|Bacteroidetes,47KVN@768503|Cytophagia	976|Bacteroidetes	T	Two component regulator propeller	-	-	-	-	-	-	-	-	-	-	-	-	HATPase_c,HisKA_3,Reg_prop,Y_Y_Y
BYD3_k127_427912_1	1122605.KB893645_gene991	2.622e-63	224.0	COG2197@1|root,COG2197@2|Bacteria,4NNQH@976|Bacteroidetes,1J05Y@117747|Sphingobacteriia	976|Bacteroidetes	T	helix_turn_helix, Lux Regulon	-	-	-	-	-	-	-	-	-	-	-	-	GerE,Response_reg
BYD3_k127_427912_2	481448.Minf_0355	1.676e-15	83.0	COG0526@1|root,COG0526@2|Bacteria,46SXQ@74201|Verrucomicrobia,37GRV@326457|unclassified Verrucomicrobia	74201|Verrucomicrobia	CO	Protein of unknown function, DUF255	-	-	-	-	-	-	-	-	-	-	-	-	Thioredoxin_2,Thioredoxin_7
BYD3_k127_4294241_0	1279009.ADICEAN_03476	9.998e-177	574.0	COG0308@1|root,COG0308@2|Bacteria,4NG5Q@976|Bacteroidetes,47JW1@768503|Cytophagia	976|Bacteroidetes	E	Peptidase M1, membrane alanine aminopeptidase	pepN1	-	3.4.11.2	ko:K01256	ko00480,ko01100,map00480,map01100	-	R00899,R04951	RC00096,RC00141	ko00000,ko00001,ko01000,ko01002	-	-	-	Peptidase_M1
BYD3_k127_4294241_4	1122176.KB903539_gene1303	1.504e-35	136.0	COG0211@1|root,COG3743@1|root,COG0211@2|Bacteria,COG3743@2|Bacteria,4NS7T@976|Bacteroidetes,1IT8M@117747|Sphingobacteriia	976|Bacteroidetes	J	Belongs to the bacterial ribosomal protein bL27 family	rpmA	GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904	-	ko:K02899	ko03010,map03010	M00178	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_L27
BYD3_k127_4294241_5	880070.Cycma_2148	1.31e-33	133.0	COG0261@1|root,COG0261@2|Bacteria,4NSHE@976|Bacteroidetes,47R7R@768503|Cytophagia	976|Bacteroidetes	J	This protein binds to 23S rRNA in the presence of protein L20	rplU	GO:0003674,GO:0003735,GO:0005198	-	ko:K02888	ko03010,map03010	M00178	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	HHH_5,Rho_N,Ribosomal_L21p
BYD3_k127_4294241_2	1122176.KB903539_gene1336	5.76e-87	302.0	COG0793@1|root,COG0793@2|Bacteria,4NEF4@976|Bacteroidetes,1IQVH@117747|Sphingobacteriia	976|Bacteroidetes	M	PDZ DHR GLGF domain protein	-	-	-	-	-	-	-	-	-	-	-	-	Asp_protease_2,PDZ,PDZ_2
BYD3_k127_4294241_6	1122176.KB903540_gene40	5.727e-13	72.0	COG0531@1|root,COG0531@2|Bacteria,4NH7J@976|Bacteroidetes,1IPW4@117747|Sphingobacteriia	976|Bacteroidetes	E	amino acid	-	-	-	ko:K03294	-	-	-	-	ko00000	2.A.3.2	-	-	AA_permease_2
BYD3_k127_4294241_1	1122176.KB903540_gene40	2.548e-88	304.0	COG0531@1|root,COG0531@2|Bacteria,4NH7J@976|Bacteroidetes,1IPW4@117747|Sphingobacteriia	976|Bacteroidetes	E	amino acid	-	-	-	ko:K03294	-	-	-	-	ko00000	2.A.3.2	-	-	AA_permease_2
BYD3_k127_4294241_3	1121957.ATVL01000012_gene701	5.339e-38	153.0	COG2885@1|root,COG2885@2|Bacteria,4NIY2@976|Bacteroidetes,47PC3@768503|Cytophagia	976|Bacteroidetes	M	Belongs to the ompA family	-	-	-	-	-	-	-	-	-	-	-	-	DUF937,OmpA
BYD3_k127_4315773_2	1185876.BN8_05813	1.194e-81	276.0	COG1696@1|root,COG1696@2|Bacteria,4NFK5@976|Bacteroidetes,47ME9@768503|Cytophagia	976|Bacteroidetes	M	membrane protein involved in D-alanine export	-	-	-	-	-	-	-	-	-	-	-	-	MBOAT
BYD3_k127_4315773_1	1185876.BN8_05812	1.804e-83	288.0	2BSEF@1|root,32MGE@2|Bacteria,4NK41@976|Bacteroidetes,47USI@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_4315773_0	1296415.JACC01000014_gene984	1.164e-98	340.0	COG0739@1|root,COG2273@1|root,COG3401@1|root,COG0739@2|Bacteria,COG2273@2|Bacteria,COG3401@2|Bacteria,4P1G2@976|Bacteroidetes,1I78P@117743|Flavobacteriia,2YKT3@290174|Aquimarina	976|Bacteroidetes	G	cellulase activity	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_4315773_3	700598.Niako_2798	8.213e-79	285.0	COG0457@1|root,COG2197@1|root,COG0457@2|Bacteria,COG2197@2|Bacteria,4NKED@976|Bacteroidetes,1ITWK@117747|Sphingobacteriia	976|Bacteroidetes	K	Tetratricopeptide repeat	-	-	-	-	-	-	-	-	-	-	-	-	TPR_12,TPR_7,TPR_8
BYD3_k127_4318713_0	984262.SGRA_4042	1.777e-280	897.0	COG3291@1|root,COG3291@2|Bacteria,4NG09@976|Bacteroidetes,1J102@117747|Sphingobacteriia	976|Bacteroidetes	S	Fungalysin metallopeptidase (M36)	-	-	-	-	-	-	-	-	-	-	-	-	FTP,PA,PKD,Peptidase_M36
BYD3_k127_4318713_15	1392490.JHZX01000001_gene683	1.689e-20	95.0	2DP1T@1|root,3306B@2|Bacteria,4NVIV@976|Bacteroidetes,1I9MX@117743|Flavobacteriia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_4318713_9	1296416.JACB01000010_gene1664	1.045e-57	205.0	COG1514@1|root,COG1514@2|Bacteria	2|Bacteria	J	Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester	-	-	-	-	-	-	-	-	-	-	-	-	2_5_RNA_ligase2
BYD3_k127_4318713_6	1123057.P872_21170	1.406e-78	265.0	COG3631@1|root,COG3631@2|Bacteria	2|Bacteria	S	light absorption	tauX	-	-	ko:K07255,ko:K21700	ko00430,map00430	-	R01685	RC00062	ko00000,ko00001,ko01000	-	-	-	SnoaL_2
BYD3_k127_4318713_10	1492737.FEM08_07680	9.948e-54	190.0	COG2315@1|root,COG2315@2|Bacteria,4NTRF@976|Bacteroidetes,1ID1Z@117743|Flavobacteriia,2NWYS@237|Flavobacterium	976|Bacteroidetes	S	YjbR	-	-	-	-	-	-	-	-	-	-	-	-	YjbR
BYD3_k127_4318713_3	1121899.Q764_13100	5.203e-93	310.0	COG1595@1|root,COG1595@2|Bacteria,4NEHC@976|Bacteroidetes,1HYVK@117743|Flavobacteriia,2P05D@237|Flavobacterium	976|Bacteroidetes	K	Belongs to the sigma-70 factor family. ECF subfamily	-	-	-	ko:K03088	-	-	-	-	ko00000,ko03021	-	-	-	Sigma70_r2,Sigma70_r4_2
BYD3_k127_4318713_8	1121899.Q764_13105	2.665e-60	210.0	2BVXR@1|root,32QYG@2|Bacteria,4NQMX@976|Bacteroidetes,1I3BN@117743|Flavobacteriia,2NWS7@237|Flavobacterium	976|Bacteroidetes	M	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase	-	-	-	-	-	-	-	-	-	-	-	-	DoxX
BYD3_k127_4318713_4	1506583.JQJY01000001_gene681	1.801e-88	296.0	arCOG05253@1|root,31CTK@2|Bacteria,4PDER@976|Bacteroidetes,1ICX2@117743|Flavobacteriia,2NVSV@237|Flavobacterium	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_4318713_11	649349.Lbys_1586	3.981e-53	195.0	COG4122@1|root,COG4122@2|Bacteria,4NH42@976|Bacteroidetes,47KAK@768503|Cytophagia	976|Bacteroidetes	S	PFAM O-methyltransferase	mdmC	-	2.1.1.104	ko:K00588	ko00360,ko00940,ko00941,ko00945,ko01100,ko01110,map00360,map00940,map00941,map00945,map01100,map01110	M00039,M00350	R01942,R06578	RC00003,RC00392	ko00000,ko00001,ko00002,ko01000	-	-	-	Methyltransf_3
BYD3_k127_4318713_7	1122176.KB903551_gene4226	1.124e-63	229.0	COG0697@1|root,COG0697@2|Bacteria,4NE8D@976|Bacteroidetes,1IP6X@117747|Sphingobacteriia	976|Bacteroidetes	EG	PFAM EamA-like transporter family	-	-	-	-	-	-	-	-	-	-	-	-	EamA
BYD3_k127_4318713_12	760192.Halhy_3993	1.861e-52	189.0	COG1225@1|root,COG1225@2|Bacteria,4NMGU@976|Bacteroidetes,1IS08@117747|Sphingobacteriia	976|Bacteroidetes	O	alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen	-	-	1.11.1.15	ko:K03564	-	-	-	-	ko00000,ko01000	-	-	-	AhpC-TSA
BYD3_k127_4318713_14	1122176.KB903551_gene4228	1.004e-28	118.0	COG2127@1|root,COG2127@2|Bacteria,4NS8R@976|Bacteroidetes,1IUIV@117747|Sphingobacteriia	976|Bacteroidetes	S	Clp protease adaptor protein ClpS	clpS	-	-	ko:K06891	-	-	-	-	ko00000	-	-	-	ClpS
BYD3_k127_4318713_5	1122176.KB903551_gene4229	2.457e-82	279.0	COG2360@1|root,COG2360@2|Bacteria,4NG3A@976|Bacteroidetes,1IP1V@117747|Sphingobacteriia	976|Bacteroidetes	O	Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine	aat	-	2.3.2.6	ko:K00684	-	-	R03813,R11443,R11444	RC00055,RC00064	ko00000,ko01000	-	-	-	Leu_Phe_trans
BYD3_k127_4318713_2	1122621.ATZA01000018_gene3894	1.256e-112	372.0	COG1052@1|root,COG1052@2|Bacteria,4PKE3@976|Bacteroidetes,1INZ9@117747|Sphingobacteriia	976|Bacteroidetes	CH	D-isomer specific 2-hydroxyacid dehydrogenase	hprA	-	1.1.1.29,1.1.1.399,1.1.1.95	ko:K00018,ko:K00058	ko00260,ko00630,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00260,map00630,map00680,map01100,map01110,map01120,map01130,map01200,map01230	M00020,M00346	R00717,R01388,R01513	RC00031,RC00042	ko00000,ko00001,ko00002,ko01000,ko04147	-	-	-	2-Hacid_dh,2-Hacid_dh_C
BYD3_k127_4318713_1	485918.Cpin_6915	3.24e-254	802.0	COG1200@1|root,COG1200@2|Bacteria,4NDZV@976|Bacteroidetes,1IP0N@117747|Sphingobacteriia	976|Bacteroidetes	L	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)	recG	-	3.6.4.12	ko:K03655	ko03440,map03440	-	-	-	ko00000,ko00001,ko01000,ko03400	-	-	-	DEAD,Helicase_C,RecG_wedge
BYD3_k127_4318713_13	760192.Halhy_2389	1.093e-35	139.0	COG0858@1|root,COG0858@2|Bacteria,4NSQJ@976|Bacteroidetes,1ISV5@117747|Sphingobacteriia	976|Bacteroidetes	J	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA	rbfA	-	-	ko:K02834	-	-	-	-	ko00000,ko03009	-	-	-	RBFA
BYD3_k127_4344781_0	760192.Halhy_6462	1.697e-114	375.0	COG1360@1|root,COG1360@2|Bacteria,4NF2Y@976|Bacteroidetes,1IR4D@117747|Sphingobacteriia	976|Bacteroidetes	N	OmpA MotB domain protein	-	-	-	ko:K02557	ko02030,ko02040,map02030,map02040	-	-	-	ko00000,ko00001,ko02000,ko02035	1.A.30.1	-	-	OmpA
BYD3_k127_4344781_2	592029.DDD_2545	2.874e-19	93.0	2EB4Z@1|root,30YQX@2|Bacteria,4PCMU@976|Bacteroidetes,1IN34@117743|Flavobacteriia,3HM7G@363408|Nonlabens	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_4344781_1	172045.KS04_06685	2.939e-48	180.0	COG0746@1|root,COG0746@2|Bacteria,4NMYW@976|Bacteroidetes,1I194@117743|Flavobacteriia,34S55@308865|Elizabethkingia	976|Bacteroidetes	H	Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo- MPT) cofactor (Moco or molybdenum cofactor) to form Mo- molybdopterin guanine dinucleotide (Mo-MGD) cofactor	mobA	-	2.7.7.77	ko:K03752	ko00790,ko01100,map00790,map01100	-	R11581	-	ko00000,ko00001,ko01000	-	-	-	NTP_transf_3
BYD3_k127_4344781_3	755732.Fluta_3513	3.154e-10	72.0	COG1404@1|root,COG1404@2|Bacteria,4NTWX@976|Bacteroidetes,1I4GV@117743|Flavobacteriia,2PBAJ@246874|Cryomorphaceae	976|Bacteroidetes	O	Subtilase family	-	-	-	-	-	-	-	-	-	-	-	-	Peptidase_S8
BYD3_k127_435000_0	1122176.KB903561_gene3599	1.542e-152	488.0	COG0798@1|root,COG0798@2|Bacteria,4NFG7@976|Bacteroidetes,1IP3I@117747|Sphingobacteriia	976|Bacteroidetes	P	arsenical-resistance protein	acr3	-	-	ko:K03325	-	-	-	-	ko00000,ko02000	2.A.59	-	-	SBF
BYD3_k127_435000_3	1279009.ADICEAN_01238	3.034e-73	252.0	COG0394@1|root,COG0394@2|Bacteria,4NE8C@976|Bacteroidetes,47PXK@768503|Cytophagia	976|Bacteroidetes	T	PFAM Low molecular weight phosphotyrosine protein phosphatase	arsC	-	1.20.4.1	ko:K03741	-	-	-	-	ko00000,ko01000	-	-	-	LMWPc
BYD3_k127_435000_1	926549.KI421517_gene3479	5.506e-147	470.0	COG0492@1|root,COG0492@2|Bacteria,4NEVX@976|Bacteroidetes,47JQX@768503|Cytophagia	976|Bacteroidetes	C	Thioredoxin reductase	trxB	-	1.8.1.9	ko:K00384	ko00450,map00450	-	R02016,R03596,R09372	RC00013,RC02518,RC02873	ko00000,ko00001,ko01000	-	-	-	Pyr_redox_2
BYD3_k127_435000_2	1237149.C900_04215	4.288e-117	383.0	COG0500@1|root,COG2226@2|Bacteria,4NEUC@976|Bacteroidetes,47MVN@768503|Cytophagia	976|Bacteroidetes	Q	Hypothetical methyltransferase	arsM	-	2.1.1.137	ko:K07755	-	-	-	-	ko00000,ko01000	-	-	-	Methyltransf_11,Methyltransf_31
BYD3_k127_435000_5	926549.KI421517_gene612	8.971e-38	147.0	COG0640@1|root,COG0640@2|Bacteria,4NQK3@976|Bacteroidetes,47R2A@768503|Cytophagia	976|Bacteroidetes	K	PFAM Bacterial regulatory protein, arsR family	-	-	-	-	-	-	-	-	-	-	-	-	HTH_20,HTH_5
BYD3_k127_435000_4	1107311.Q767_01830	6.018e-43	169.0	COG0671@1|root,COG0671@2|Bacteria,4NF9W@976|Bacteroidetes,1HY94@117743|Flavobacteriia	976|Bacteroidetes	I	PAP2 superfamily	-	-	-	-	-	-	-	-	-	-	-	-	PAP2
BYD3_k127_4388410_0	760192.Halhy_5215	7.598e-110	377.0	COG2373@1|root,COG2373@2|Bacteria,4NED2@976|Bacteroidetes,1IQPG@117747|Sphingobacteriia	976|Bacteroidetes	S	COG2373 Large extracellular alpha-helical protein	-	-	-	-	-	-	-	-	-	-	-	-	A2M,A2M_N,A2M_N_2,CarbopepD_reg_2,Plug
BYD3_k127_4388410_1	1313421.JHBV01000044_gene2953	2.502e-15	78.0	COG2373@1|root,COG2373@2|Bacteria,4NED2@976|Bacteroidetes,1IQPG@117747|Sphingobacteriia	976|Bacteroidetes	S	COG2373 Large extracellular alpha-helical protein	-	-	-	-	-	-	-	-	-	-	-	-	A2M,A2M_N,A2M_N_2,CarbopepD_reg_2,Plug
BYD3_k127_4393997_5	1313421.JHBV01000044_gene2952	4.157e-48	184.0	COG2373@1|root,COG2373@2|Bacteria,4NED2@976|Bacteroidetes,1IQPG@117747|Sphingobacteriia	976|Bacteroidetes	S	COG2373 Large extracellular alpha-helical protein	-	-	-	-	-	-	-	-	-	-	-	-	A2M,A2M_N,A2M_N_2,CarbopepD_reg_2,Plug
BYD3_k127_4393997_4	1168034.FH5T_20455	8.929e-49	187.0	COG0665@1|root,COG0665@2|Bacteria,4NFCD@976|Bacteroidetes	976|Bacteroidetes	E	fad dependent oxidoreductase	thiO	-	-	-	-	-	-	-	-	-	-	-	DAO
BYD3_k127_4393997_6	1443665.JACA01000051_gene2011	5.329e-41	154.0	COG2315@1|root,COG2315@2|Bacteria,4NS6J@976|Bacteroidetes,1I2YP@117743|Flavobacteriia,2YJJ5@290174|Aquimarina	976|Bacteroidetes	S	YjbR	-	-	-	-	-	-	-	-	-	-	-	-	YjbR
BYD3_k127_4393997_7	984262.SGRA_2419	1.655e-26	111.0	COG3255@1|root,COG3255@2|Bacteria,4NYB1@976|Bacteroidetes	976|Bacteroidetes	I	Sterol-binding domain protein	-	-	-	-	-	-	-	-	-	-	-	-	SCP2
BYD3_k127_4393997_1	1120968.AUBX01000009_gene204	1.614e-97	329.0	COG0223@1|root,COG0223@2|Bacteria,4NE8U@976|Bacteroidetes,47JDP@768503|Cytophagia	976|Bacteroidetes	J	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus	fmt	GO:0003674,GO:0003824,GO:0004479,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006412,GO:0006413,GO:0006464,GO:0006518,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016741,GO:0016742,GO:0019538,GO:0019988,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0036211,GO:0043043,GO:0043170,GO:0043412,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0046483,GO:0071704,GO:0071951,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576	2.1.2.9	ko:K00604	ko00670,ko00970,map00670,map00970	-	R03940	RC00026,RC00165	ko00000,ko00001,ko01000	-	-	-	Formyl_trans_C,Formyl_trans_N
BYD3_k127_4393997_2	1305735.JAFT01000005_gene1227	3.389e-83	295.0	COG1123@1|root,COG4172@2|Bacteria,1MU09@1224|Proteobacteria,2TQP0@28211|Alphaproteobacteria,2PDUR@252301|Oceanicola	28211|Alphaproteobacteria	P	Oligopeptide/dipeptide transporter, C-terminal region	-	-	-	ko:K02031,ko:K02032	ko02024,map02024	M00239	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.5	-	-	ABC_tran,oligo_HPY
BYD3_k127_4393997_8	1122176.KB903609_gene5130	1.348e-12	78.0	COG0457@1|root,COG0457@2|Bacteria,4PKDV@976|Bacteroidetes	976|Bacteroidetes	S	Tetratricopeptide repeat	-	-	-	-	-	-	-	-	-	-	-	-	CarboxypepD_reg,PD40,SPOR,TPR_19
BYD3_k127_4393997_0	1122176.KB903565_gene3321	1.081e-186	619.0	COG1404@1|root,COG1404@2|Bacteria,4NF1M@976|Bacteroidetes,1ITAS@117747|Sphingobacteriia	976|Bacteroidetes	O	Serine protease, subtilase family	-	-	-	-	-	-	-	-	-	-	-	-	Peptidase_S8
BYD3_k127_4393997_3	1121957.ATVL01000007_gene1831	2.805e-58	203.0	COG1250@1|root,COG1250@2|Bacteria,4NGU8@976|Bacteroidetes,47NRU@768503|Cytophagia	976|Bacteroidetes	I	3-hydroxyacyl-CoA dehydrogenase, C-terminal domain	hbd	-	1.1.1.157	ko:K00074	ko00360,ko00362,ko00650,ko01100,ko01120,map00360,map00362,map00650,map01100,map01120	-	R01976,R05576,R06941	RC00029,RC00117	ko00000,ko00001,ko01000	-	-	-	3HCDH,3HCDH_N
BYD3_k127_4435927_5	159749.K0SJL6	0.000222	48.0	KOG2458@1|root,KOG2458@2759|Eukaryota,2XFJC@2836|Bacillariophyta	2836|Bacillariophyta	S	Putative lipopolysaccharide-modifying enzyme.	-	-	-	-	-	-	-	-	-	-	-	-	Glyco_transf_90
BYD3_k127_4435927_4	485918.Cpin_3605	2.715e-33	135.0	COG0250@1|root,COG0250@2|Bacteria,4NUBQ@976|Bacteroidetes,1ITIT@117747|Sphingobacteriia	976|Bacteroidetes	K	Transcription termination factor nusG	-	-	-	-	-	-	-	-	-	-	-	-	NusG
BYD3_k127_4435927_1	929556.Solca_0499	9.748e-95	327.0	COG4452@1|root,COG4452@2|Bacteria,4NGKY@976|Bacteroidetes,1IPKH@117747|Sphingobacteriia	976|Bacteroidetes	V	Inner membrane protein CreD	creD	-	-	ko:K06143	-	-	-	-	ko00000	-	-	-	CreD
BYD3_k127_4435927_0	1086011.HJ01_01659	1.714e-120	397.0	COG0642@1|root,COG2205@2|Bacteria,4NFYN@976|Bacteroidetes,1HZ6X@117743|Flavobacteriia,2P05M@237|Flavobacterium	976|Bacteroidetes	T	Domain of unknown function (DUF4118)	-	-	2.7.13.3	ko:K07646	ko02020,map02020	M00454	-	-	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	-	-	-	DUF4118,HATPase_c,HisKA
BYD3_k127_4435927_3	927658.AJUM01000037_gene2068	1.097e-77	265.0	COG0745@1|root,COG0745@2|Bacteria,4NIQC@976|Bacteroidetes,2G2Z1@200643|Bacteroidia	976|Bacteroidetes	K	COGs COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain	-	-	-	ko:K07667	ko02020,ko02024,map02020,map02024	M00454	-	-	ko00000,ko00001,ko00002,ko02022	-	-	-	Response_reg,Trans_reg_C
BYD3_k127_4435927_2	1107311.Q767_03560	1.309e-94	317.0	COG3158@1|root,COG3158@2|Bacteria,4NET9@976|Bacteroidetes,1HX75@117743|Flavobacteriia,2NVRU@237|Flavobacterium	976|Bacteroidetes	P	K+ potassium transporter	-	-	-	ko:K03549	-	-	-	-	ko00000,ko02000	2.A.72	-	-	K_trans
BYD3_k127_4437974_8	1454007.JAUG01000003_gene3083	2.369e-08	57.0	COG0117@1|root,COG1985@1|root,COG0117@2|Bacteria,COG1985@2|Bacteria,4NFJE@976|Bacteroidetes,1IP03@117747|Sphingobacteriia	976|Bacteroidetes	H	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate	ribD	-	1.1.1.193,3.5.4.26	ko:K11752	ko00740,ko01100,ko01110,ko02024,map00740,map01100,map01110,map02024	M00125	R03458,R03459	RC00204,RC00933	ko00000,ko00001,ko00002,ko01000	-	-	-	RibD_C,dCMP_cyt_deam_1
BYD3_k127_4437974_4	1313421.JHBV01000007_gene4309	1.27e-51	189.0	COG1331@1|root,COG1331@2|Bacteria,4PKPW@976|Bacteroidetes,1ITRS@117747|Sphingobacteriia	976|Bacteroidetes	O	COG1331 Highly conserved protein containing a thioredoxin domain	-	-	-	-	-	-	-	-	-	-	-	-	Thioredox_DsbH,Thioredoxin_2,Thioredoxin_7
BYD3_k127_4437974_0	760192.Halhy_5396	1.587e-164	535.0	COG1387@1|root,COG1796@1|root,COG1387@2|Bacteria,COG1796@2|Bacteria,4NDX5@976|Bacteroidetes,1IPE5@117747|Sphingobacteriia	976|Bacteroidetes	L	DNA polymerase	dpx	-	-	ko:K02347	-	-	-	-	ko00000,ko03400	-	-	-	HHH_5,HHH_8,PHP
BYD3_k127_4437974_5	385682.AFSL01000074_gene1279	2.74e-21	105.0	2D6WA@1|root,32TMZ@2|Bacteria,4NU16@976|Bacteroidetes,2FYYU@200643|Bacteroidia,3XKM2@558415|Marinilabiliaceae	976|Bacteroidetes	S	Domain of unknown function (DUF4340)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4340
BYD3_k127_4437974_1	1408473.JHXO01000016_gene1934	1.225e-142	468.0	COG3225@1|root,COG3225@2|Bacteria,4NF62@976|Bacteroidetes,2FR8P@200643|Bacteroidia	976|Bacteroidetes	N	ABC-type uncharacterized transport system	-	-	-	-	-	-	-	-	-	-	-	-	ABC_transp_aux
BYD3_k127_4437974_3	313606.M23134_01801	1.382e-85	290.0	COG1277@1|root,COG1277@2|Bacteria,4NG5G@976|Bacteroidetes,47T9V@768503|Cytophagia	976|Bacteroidetes	S	ABC-2 family transporter protein	-	-	-	ko:K01992	-	M00254	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	ABC2_membrane_2
BYD3_k127_4437974_2	869213.JCM21142_403	1.716e-121	398.0	COG1131@1|root,COG1131@2|Bacteria,4NEH0@976|Bacteroidetes,47TXK@768503|Cytophagia	976|Bacteroidetes	V	ATPases associated with a variety of cellular activities	gldA	-	-	ko:K01990	-	M00254	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	ABC_tran
BYD3_k127_4437974_6	926562.Oweho_1134	2.134e-12	75.0	COG2849@1|root,COG2849@2|Bacteria,4NMDX@976|Bacteroidetes,1I51X@117743|Flavobacteriia	976|Bacteroidetes	M	PFAM MORN repeat variant	-	-	-	-	-	-	-	-	-	-	-	-	MORN_2,TPR_1,TPR_8
BYD3_k127_4445581_0	1122176.KB903542_gene359	5.118e-136	443.0	COG1508@1|root,COG1508@2|Bacteria,4NE5B@976|Bacteroidetes,1IQIK@117747|Sphingobacteriia	976|Bacteroidetes	K	RNA polymerase, sigma-54 factor	rpoN	-	-	ko:K03092	ko02020,ko05111,map02020,map05111	-	-	-	ko00000,ko00001,ko03021	-	-	-	Sigma54_AID,Sigma54_CBD,Sigma54_DBD
BYD3_k127_4445581_3	1122176.KB903549_gene1274	4.998e-11	64.0	COG4992@1|root,COG4992@2|Bacteria,4NFMC@976|Bacteroidetes,1IQCC@117747|Sphingobacteriia	976|Bacteroidetes	E	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family	argD	-	2.6.1.11,2.6.1.17	ko:K00821	ko00220,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00220,map00300,map01100,map01110,map01120,map01130,map01210,map01230	M00016,M00028,M00845	R02283,R04475	RC00006,RC00062	ko00000,ko00001,ko00002,ko01000,ko01007	-	-	-	Aminotran_3
BYD3_k127_4445581_1	1313301.AUGC01000005_gene322	7.119e-118	388.0	COG4992@1|root,COG4992@2|Bacteria,4NFMC@976|Bacteroidetes	976|Bacteroidetes	E	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family	argD	-	2.6.1.11,2.6.1.17	ko:K00821	ko00220,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00220,map00300,map01100,map01110,map01120,map01130,map01210,map01230	M00016,M00028,M00845	R02283,R04475	RC00006,RC00062	ko00000,ko00001,ko00002,ko01000,ko01007	-	-	-	Aminotran_3
BYD3_k127_4445581_2	1122179.KB890436_gene1237	4.03e-107	354.0	COG1785@1|root,COG1785@2|Bacteria,4NG3D@976|Bacteroidetes,1IPXF@117747|Sphingobacteriia	976|Bacteroidetes	P	Belongs to the alkaline phosphatase family	-	-	3.1.3.1	ko:K01077	ko00730,ko00790,ko01100,ko02020,map00730,map00790,map01100,map02020	M00126	R02135,R04620	RC00017	ko00000,ko00001,ko00002,ko00537,ko01000,ko04147	-	-	-	Alk_phosphatase
BYD3_k127_4453951_0	1267533.KB906739_gene2749	6.406e-133	441.0	COG1404@1|root,COG4447@1|root,COG1404@2|Bacteria,COG4447@2|Bacteria,3Y4R8@57723|Acidobacteria,2JMPX@204432|Acidobacteriia	204432|Acidobacteriia	O	Belongs to the peptidase S8 family	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_4453951_2	1227457.C451_06922	0.0003489	51.0	COG3794@1|root,arCOG02920@2157|Archaea,2XYC8@28890|Euryarchaeota,23WM7@183963|Halobacteria	183963|Halobacteria	C	COG3794 Plastocyanin	-	-	-	-	-	-	-	-	-	-	-	-	Copper-bind
BYD3_k127_4453951_1	203275.BFO_0510	1.114e-29	127.0	2CIPG@1|root,2ZPSU@2|Bacteria,4P8PG@976|Bacteroidetes	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_44542_3	743722.Sph21_1695	4.186e-79	267.0	COG0841@1|root,COG0841@2|Bacteria,4NDZG@976|Bacteroidetes,1IPZZ@117747|Sphingobacteriia	976|Bacteroidetes	V	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family	-	-	-	ko:K03296	-	-	-	-	ko00000	2.A.6.2	-	-	ACR_tran
BYD3_k127_44542_0	391596.PBAL39_04164	1.603e-117	389.0	COG0845@1|root,COG0845@2|Bacteria,4NF23@976|Bacteroidetes,1IQVF@117747|Sphingobacteriia	976|Bacteroidetes	M	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family	-	-	-	-	-	-	-	-	-	-	-	-	HlyD_D23
BYD3_k127_44542_6	1121895.Q765_02445	6.1e-39	148.0	COG1538@1|root,COG1538@2|Bacteria,4NF4X@976|Bacteroidetes,1HYW1@117743|Flavobacteriia,2NSB2@237|Flavobacterium	976|Bacteroidetes	MU	PFAM Outer membrane efflux protein	-	-	-	-	-	-	-	-	-	-	-	-	OEP
BYD3_k127_44542_2	1086011.HJ01_00896	2.296e-87	300.0	COG1538@1|root,COG1538@2|Bacteria,4NF4X@976|Bacteroidetes,1HYW1@117743|Flavobacteriia,2NSB2@237|Flavobacterium	976|Bacteroidetes	MU	PFAM Outer membrane efflux protein	-	-	-	-	-	-	-	-	-	-	-	-	OEP
BYD3_k127_44542_8	762903.Pedsa_2457	2.507e-27	119.0	COG1309@1|root,COG1309@2|Bacteria	2|Bacteria	K	transcriptional regulator	-	-	-	-	-	-	-	-	-	-	-	-	TetR_N
BYD3_k127_44542_5	391596.PBAL39_04149	3.198e-41	160.0	COG1309@1|root,COG1309@2|Bacteria,4NP0V@976|Bacteroidetes,1ISMF@117747|Sphingobacteriia	976|Bacteroidetes	K	PFAM Bacterial regulatory proteins, tetR family	-	-	-	-	-	-	-	-	-	-	-	-	TetR_N
BYD3_k127_44542_4	1122176.KB903534_gene2158	1.586e-75	261.0	COG1878@1|root,COG1878@2|Bacteria,4NFXM@976|Bacteroidetes	976|Bacteroidetes	S	Metal-dependent hydrolase	-	-	-	-	-	-	-	-	-	-	-	-	Cyclase
BYD3_k127_44542_1	760192.Halhy_3160	1.009e-96	324.0	COG0061@1|root,COG0061@2|Bacteria,4NFG5@976|Bacteroidetes,1IPBF@117747|Sphingobacteriia	976|Bacteroidetes	G	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP	nadK	-	2.7.1.23	ko:K00858	ko00760,ko01100,map00760,map01100	-	R00104	RC00002,RC00078	ko00000,ko00001,ko01000	-	-	-	NAD_kinase
BYD3_k127_44542_9	688270.Celal_2623	3.222e-19	91.0	COG1807@1|root,COG1807@2|Bacteria,4P3XI@976|Bacteroidetes	976|Bacteroidetes	M	4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family	-	-	-	-	-	-	-	-	-	-	-	-	PMT_2
BYD3_k127_4457_10	1218108.KB908294_gene2306	1.61e-05	53.0	COG2849@1|root,COG2849@2|Bacteria,4NI9T@976|Bacteroidetes,1HZ9C@117743|Flavobacteriia	976|Bacteroidetes	S	repeat protein	-	-	-	-	-	-	-	-	-	-	-	-	MORN_2
BYD3_k127_4457_4	760192.Halhy_3530	1.011e-69	241.0	COG1595@1|root,COG1595@2|Bacteria,4NMM3@976|Bacteroidetes,1IPYA@117747|Sphingobacteriia	976|Bacteroidetes	K	Belongs to the sigma-70 factor family. ECF subfamily	sigR_3	-	-	ko:K03088	-	-	-	-	ko00000,ko03021	-	-	-	Sigma70_r2,Sigma70_r4_2
BYD3_k127_4457_2	760192.Halhy_2716	4.232e-101	340.0	COG1181@1|root,COG1181@2|Bacteria,4NE9P@976|Bacteroidetes,1INQY@117747|Sphingobacteriia	976|Bacteroidetes	F	Belongs to the D-alanine--D-alanine ligase family	ddl	-	6.3.2.4	ko:K01921	ko00473,ko00550,ko01100,ko01502,map00473,map00550,map01100,map01502	-	R01150	RC00064,RC00141	ko00000,ko00001,ko01000,ko01011	-	-	-	Dala_Dala_lig_C,Dala_Dala_lig_N
BYD3_k127_4457_6	1338011.BD94_0951	1.2e-35	138.0	COG3422@1|root,COG3422@2|Bacteria,4NS9J@976|Bacteroidetes,1I40P@117743|Flavobacteriia,34RMK@308865|Elizabethkingia	976|Bacteroidetes	S	Domain of unknown function (DUF1508)	-	-	-	ko:K09946	-	-	-	-	ko00000	-	-	-	DUF1508
BYD3_k127_4457_8	1239962.C943_00946	8.139e-24	113.0	COG3206@1|root,COG3206@2|Bacteria,4NH8F@976|Bacteroidetes,47N66@768503|Cytophagia	976|Bacteroidetes	M	lipopolysaccharide biosynthesis protein	-	-	-	-	-	-	-	-	-	-	-	-	Wzz
BYD3_k127_4457_0	1150600.ADIARSV_2704	7.613e-133	433.0	COG1209@1|root,COG1209@2|Bacteria,4NE1U@976|Bacteroidetes,1IPV3@117747|Sphingobacteriia	976|Bacteroidetes	H	Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis	rfbA	-	2.7.7.24	ko:K00973	ko00521,ko00523,ko00525,ko01130,map00521,map00523,map00525,map01130	M00793	R02328	RC00002	ko00000,ko00001,ko00002,ko01000	-	-	-	NTP_transferase
BYD3_k127_4457_3	860228.Ccan_15750	3.434e-95	323.0	COG3407@1|root,COG3407@2|Bacteria,4NDYX@976|Bacteroidetes,1HY6U@117743|Flavobacteriia,1ER0U@1016|Capnocytophaga	976|Bacteroidetes	I	diphosphomevalonate decarboxylase	mvaD	-	4.1.1.33	ko:K01597	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	M00095	R01121	RC00453	ko00000,ko00001,ko00002,ko01000	-	-	-	-
BYD3_k127_4457_5	1122176.KB903544_gene692	4.573e-41	159.0	2CI1G@1|root,2Z7JA@2|Bacteria,4NF1T@976|Bacteroidetes,1ISFV@117747|Sphingobacteriia	976|Bacteroidetes	S	Domain of unknown function (DUF4294)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4294
BYD3_k127_4457_1	926562.Oweho_2657	9.228e-119	426.0	COG3386@1|root,COG4386@1|root,COG3386@2|Bacteria,COG4386@2|Bacteria,4PP0K@976|Bacteroidetes,1IKDR@117743|Flavobacteriia,2PBMA@246874|Cryomorphaceae	976|Bacteroidetes	G	C-terminal domain of CHU protein family	-	-	-	-	-	-	-	-	-	-	-	-	CHU_C
BYD3_k127_4457_7	755732.Fluta_1670	6.973e-24	120.0	COG2885@1|root,COG3291@1|root,COG2885@2|Bacteria,COG3291@2|Bacteria	2|Bacteria	S	metallopeptidase activity	-	-	3.4.21.50	ko:K01337	-	-	-	-	ko00000,ko01000,ko01002	-	-	-	CHU_C,PKD,SprB
BYD3_k127_4459128_3	1122179.KB890414_gene1716	5.65e-28	121.0	2DMRA@1|root,32T5V@2|Bacteria	2|Bacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_4459128_1	760192.Halhy_5864	3.182e-124	406.0	COG0598@1|root,COG0598@2|Bacteria,4NGM7@976|Bacteroidetes,1IWM4@117747|Sphingobacteriia	976|Bacteroidetes	P	Mg2 transporter protein, CorA family protein	corA	-	-	ko:K03284	-	-	-	-	ko00000,ko02000	1.A.35.1,1.A.35.3	-	-	CorA
BYD3_k127_4459128_0	1122176.KB903537_gene1710	2.367e-176	556.0	COG0208@1|root,COG0208@2|Bacteria,4NG18@976|Bacteroidetes,1IP47@117747|Sphingobacteriia	976|Bacteroidetes	F	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides	nrdB	-	1.17.4.1	ko:K00526	ko00230,ko00240,ko01100,map00230,map00240,map01100	M00053	R02017,R02018,R02019,R02024	RC00613	ko00000,ko00001,ko00002,ko01000,ko03400	-	-	-	Ribonuc_red_sm
BYD3_k127_4459128_2	1121898.Q766_13495	1.524e-48	176.0	COG0209@1|root,COG0209@2|Bacteria,4NEHQ@976|Bacteroidetes,1HXHB@117743|Flavobacteriia,2NTAW@237|Flavobacterium	976|Bacteroidetes	F	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides	nrdA	-	1.17.4.1	ko:K00525	ko00230,ko00240,ko01100,map00230,map00240,map01100	M00053	R02017,R02018,R02019,R02024	RC00613	ko00000,ko00001,ko00002,ko01000,ko03400	-	-	-	ATP-cone,Ribonuc_red_lgC,Ribonuc_red_lgN
BYD3_k127_4462668_7	1122176.KB903565_gene3230	1.313e-30	122.0	COG1121@1|root,COG1121@2|Bacteria,4NHZ9@976|Bacteroidetes,1J083@117747|Sphingobacteriia	976|Bacteroidetes	P	ATPases associated with a variety of cellular activities	troB	-	3.6.3.35	ko:K11710,ko:K19973	ko02010,map02010	M00319,M00792	-	-	ko00000,ko00001,ko00002,ko01000,ko02000	3.A.1.15,3.A.1.15.15	-	-	ABC_tran
BYD3_k127_4462668_8	1313421.JHBV01000014_gene3809	2.064e-25	109.0	2C9BK@1|root,32RP1@2|Bacteria,4NSPA@976|Bacteroidetes,1IU9B@117747|Sphingobacteriia	976|Bacteroidetes	S	Domain of unknown function (DUF4286)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4286
BYD3_k127_4462668_1	1089547.KB913013_gene2669	3.091e-190	601.0	COG1960@1|root,COG1960@2|Bacteria,4NEHA@976|Bacteroidetes,47JZA@768503|Cytophagia	976|Bacteroidetes	I	acyl-CoA dehydrogenase	acdA	-	-	-	-	-	-	-	-	-	-	-	Acyl-CoA_dh_1,Acyl-CoA_dh_M,Acyl-CoA_dh_N
BYD3_k127_4462668_6	1123057.P872_24385	3.396e-53	201.0	COG0517@1|root,COG1994@1|root,COG0517@2|Bacteria,COG1994@2|Bacteria,4NK8R@976|Bacteroidetes,47NFI@768503|Cytophagia	976|Bacteroidetes	S	Peptidase family M50	-	-	-	-	-	-	-	-	-	-	-	-	CBS,Peptidase_M50
BYD3_k127_4462668_11	926549.KI421517_gene1336	3.614e-13	77.0	COG2825@1|root,COG2825@2|Bacteria,4NSCM@976|Bacteroidetes,47VW2@768503|Cytophagia	976|Bacteroidetes	M	Outer membrane protein (OmpH-like)	ompH	-	-	ko:K06142	-	-	-	-	ko00000	-	-	-	OmpH
BYD3_k127_4462668_10	1123248.KB893322_gene574	4.713e-19	88.0	COG1826@1|root,COG1826@2|Bacteria,4NUNH@976|Bacteroidetes,1IUFV@117747|Sphingobacteriia	976|Bacteroidetes	U	Sec-independent protein translocase protein TatA	tatA	-	-	ko:K03116	ko03060,ko03070,map03060,map03070	M00336	-	-	ko00000,ko00001,ko00002,ko02044	2.A.64	-	-	MttA_Hcf106
BYD3_k127_4462668_3	946362.XP_004997743.1	7.194e-154	524.0	COG2132@1|root,2QR4X@2759|Eukaryota,38BK4@33154|Opisthokonta	33154|Opisthokonta	Q	Multicopper oxidase	-	-	-	-	-	-	-	-	-	-	-	-	Cu-oxidase,Cu-oxidase_2,Cu-oxidase_3
BYD3_k127_4462668_9	643867.Ftrac_0155	1.573e-23	116.0	COG3291@1|root,COG3291@2|Bacteria,4NJAF@976|Bacteroidetes,47P0M@768503|Cytophagia	976|Bacteroidetes	G	Repeats in polycystic kidney disease 1 (PKD1) and other proteins	-	-	-	-	-	-	-	-	-	-	-	-	PKD
BYD3_k127_4462668_0	471854.Dfer_5599	2.157e-306	967.0	COG4206@1|root,COG4206@2|Bacteria,4P258@976|Bacteroidetes	976|Bacteroidetes	H	TonB-linked outer membrane protein, SusC RagA family	-	-	-	-	-	-	-	-	-	-	-	-	CarbopepD_reg_2,Plug,STN,TonB_dep_Rec
BYD3_k127_4462668_4	471854.Dfer_5600	1.033e-150	490.0	COG0702@1|root,COG0702@2|Bacteria,4NHAI@976|Bacteroidetes,47Y9C@768503|Cytophagia	976|Bacteroidetes	GM	Pfam:SusD	-	-	-	ko:K21572	-	-	-	-	ko00000,ko02000	8.A.46.1,8.A.46.3	-	-	SusD-like_3,SusD_RagB
BYD3_k127_4462668_2	927658.AJUM01000034_gene323	1.145e-158	514.0	COG5520@1|root,COG5520@2|Bacteria,4NF4C@976|Bacteroidetes,2FNPT@200643|Bacteroidia,3XJER@558415|Marinilabiliaceae	976|Bacteroidetes	M	Glycosyl hydrolase family 30 beta sandwich domain	-	-	3.2.1.45	ko:K01201	ko00511,ko00600,ko01100,ko04142,map00511,map00600,map01100,map04142	-	R01498	RC00059,RC00451	ko00000,ko00001,ko01000	-	GH30	-	Glyco_hydro_30,Glyco_hydro_30C
BYD3_k127_4462668_5	760192.Halhy_1114	1.923e-55	199.0	COG5520@1|root,COG5520@2|Bacteria,4NF4C@976|Bacteroidetes,1INPD@117747|Sphingobacteriia	976|Bacteroidetes	G	Belongs to the glycosyl hydrolase 30 family	-	-	3.2.1.45	ko:K01201	ko00511,ko00600,ko01100,ko04142,map00511,map00600,map01100,map04142	-	R01498	RC00059,RC00451	ko00000,ko00001,ko01000	-	GH30	-	Glyco_hydro_30,Glyco_hydro_30C
BYD3_k127_4465077_0	1122176.KB903531_gene2876	0.0	1276.0	COG0542@1|root,COG0542@2|Bacteria,4NE1J@976|Bacteroidetes,1IPYI@117747|Sphingobacteriia	976|Bacteroidetes	O	with chaperone activity ATP-binding subunit	clpC	-	-	ko:K03696	ko01100,map01100	-	-	-	ko00000,ko03110	-	-	-	AAA,AAA_2,ClpB_D2-small,Clp_N,UVR
BYD3_k127_4465077_3	1122176.KB903531_gene2877	9.925e-80	270.0	COG0290@1|root,COG0290@2|Bacteria,4NIZ5@976|Bacteroidetes,1IRGC@117747|Sphingobacteriia	976|Bacteroidetes	J	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins	infC	GO:0003674,GO:0003676,GO:0003723,GO:0003743,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006412,GO:0006413,GO:0006518,GO:0006807,GO:0006996,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016020,GO:0016043,GO:0019538,GO:0022411,GO:0032790,GO:0032984,GO:0032988,GO:0034641,GO:0034645,GO:0043021,GO:0043022,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1903008	-	ko:K02520	-	-	-	-	ko00000,ko03012,ko03029	-	-	-	IF3_C,IF3_N
BYD3_k127_4465077_7	1122179.KB890446_gene374	1.261e-19	89.0	COG0291@1|root,COG0291@2|Bacteria,4NUVR@976|Bacteroidetes,1IU0V@117747|Sphingobacteriia	976|Bacteroidetes	J	Belongs to the bacterial ribosomal protein bL35 family	rpmI	GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904	-	ko:K02916	ko03010,map03010	M00178	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_L35p
BYD3_k127_4465077_5	1122176.KB903531_gene2879	9.087e-43	158.0	COG0292@1|root,COG0292@2|Bacteria,4NNKU@976|Bacteroidetes,1ISA4@117747|Sphingobacteriia	976|Bacteroidetes	J	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit	rplT	GO:0000027,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006996,GO:0008150,GO:0009987,GO:0015934,GO:0016043,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0042254,GO:0042255,GO:0042273,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043933,GO:0044085,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071826,GO:0071840,GO:1990904	-	ko:K02887	ko03010,map03010	M00178	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_L20
BYD3_k127_4465077_2	760192.Halhy_0166	1.521e-133	437.0	COG0577@1|root,COG0577@2|Bacteria,4NECN@976|Bacteroidetes,1IR94@117747|Sphingobacteriia	976|Bacteroidetes	V	ABC-type antimicrobial peptide transport system, permease component	-	-	-	ko:K02004	-	M00258	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	FtsX,MacB_PCD
BYD3_k127_4465077_1	760192.Halhy_0165	5.345e-176	558.0	COG0809@1|root,COG0809@2|Bacteria,4NF2T@976|Bacteroidetes,1INNG@117747|Sphingobacteriia	976|Bacteroidetes	J	Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)	queA	-	2.4.99.17	ko:K07568	-	-	-	-	ko00000,ko01000,ko03016	-	-	-	Queuosine_synth
BYD3_k127_4465077_6	1122176.KB903609_gene5243	4.07e-39	145.0	2C8VT@1|root,32RN1@2|Bacteria,4NS78@976|Bacteroidetes,1ITH1@117747|Sphingobacteriia	976|Bacteroidetes	S	Protein of unknown function (DUF2795)	-	-	-	-	-	-	-	-	-	-	-	-	DUF2795
BYD3_k127_4465077_4	1313421.JHBV01000041_gene3440	5.34e-69	241.0	COG0283@1|root,COG0283@2|Bacteria,4NEMB@976|Bacteroidetes,1IRY5@117747|Sphingobacteriia	976|Bacteroidetes	F	Belongs to the cytidylate kinase family. Type 1 subfamily	cmk	GO:0003674,GO:0003824,GO:0004127,GO:0004592,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006520,GO:0006573,GO:0006575,GO:0006725,GO:0006732,GO:0006753,GO:0006766,GO:0006767,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009081,GO:0009108,GO:0009110,GO:0009117,GO:0009123,GO:0009165,GO:0009987,GO:0015939,GO:0015940,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0016874,GO:0016879,GO:0016881,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019752,GO:0032787,GO:0033317,GO:0034641,GO:0034654,GO:0042364,GO:0042398,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0046939,GO:0046940,GO:0050145,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072330,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605	2.7.4.25	ko:K00945	ko00240,ko01100,map00240,map01100	M00052	R00158,R00512,R01665	RC00002	ko00000,ko00001,ko00002,ko01000	-	-	-	Cytidylate_kin
BYD3_k127_4465077_8	1168034.FH5T_13655	4.418e-14	82.0	COG0457@1|root,COG0457@2|Bacteria,4NF5V@976|Bacteroidetes,2FP54@200643|Bacteroidia	976|Bacteroidetes	T	tetratricopeptide repeat	batE	-	-	-	-	-	-	-	-	-	-	-	SH3_3,SH3_4,TPR_1,TPR_11,TPR_16,TPR_2
BYD3_k127_4479360_0	504487.JCM19302_2833	2.709e-86	297.0	COG0296@1|root,COG0296@2|Bacteria,4NJ7Z@976|Bacteroidetes,1HZ6E@117743|Flavobacteriia	976|Bacteroidetes	G	Glycogen recognition site of AMP-activated protein kinase	-	-	-	-	-	-	-	-	-	-	-	-	AMPK1_CBM
BYD3_k127_4479360_2	1121931.AUHG01000020_gene3174	1.453e-58	216.0	2DBKE@1|root,2Z9SW@2|Bacteria,4NRWN@976|Bacteroidetes,1I012@117743|Flavobacteriia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	Asp_protease_2
BYD3_k127_4479360_1	760192.Halhy_1949	4.166e-70	246.0	COG0060@1|root,COG0060@2|Bacteria,4NEYT@976|Bacteroidetes,1IPPT@117747|Sphingobacteriia	976|Bacteroidetes	J	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)	ileS	-	6.1.1.5	ko:K01870	ko00970,map00970	M00359,M00360	R03656	RC00055,RC00523	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	-	-	-	Anticodon_1,tRNA-synt_1
BYD3_k127_4484245_2	926569.ANT_01810	1.962e-73	258.0	COG0673@1|root,COG0673@2|Bacteria,2G8FU@200795|Chloroflexi	200795|Chloroflexi	S	PFAM oxidoreductase domain protein	-	-	-	-	-	-	-	-	-	-	-	-	GFO_IDH_MocA,GFO_IDH_MocA_C
BYD3_k127_4484245_0	1392488.JHZY01000004_gene2888	1.453e-299	933.0	COG1505@1|root,COG1505@2|Bacteria,4NFJS@976|Bacteroidetes,1HX9V@117743|Flavobacteriia,2XI33@283735|Leeuwenhoekiella	976|Bacteroidetes	E	Prolyl oligopeptidase, N-terminal beta-propeller domain	pep	GO:0005575,GO:0005623,GO:0042597,GO:0044464	3.4.21.26	ko:K01322	ko04614,map04614	-	-	-	ko00000,ko00001,ko01000,ko01002	-	-	-	Peptidase_S9,Peptidase_S9_N
BYD3_k127_4484245_1	1122176.KB903544_gene726	5.262e-131	424.0	COG0524@1|root,COG0524@2|Bacteria,4NFJ9@976|Bacteroidetes,1INMS@117747|Sphingobacteriia	976|Bacteroidetes	G	PFAM pfkB family carbohydrate kinase	ydjH	-	-	-	-	-	-	-	-	-	-	-	PfkB
BYD3_k127_4484245_3	746697.Aeqsu_1615	1.359e-23	108.0	COG1215@1|root,COG1215@2|Bacteria,4NG9C@976|Bacteroidetes,1HXPD@117743|Flavobacteriia	976|Bacteroidetes	M	probably involved in cell wall biogenesis	-	-	-	-	-	-	-	-	-	-	-	-	Glyco_tranf_2_3,Glycos_transf_2
BYD3_k127_4488753_4	421072.IO89_12850	4.806e-19	89.0	COG3386@1|root,COG3386@2|Bacteria,4NHFU@976|Bacteroidetes,1I78M@117743|Flavobacteriia,3HGRZ@358033|Chryseobacterium	976|Bacteroidetes	G	Domain of unknown function (DUF4394)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4394
BYD3_k127_4488753_0	929556.Solca_1162	3.41e-198	626.0	COG0766@1|root,COG0766@2|Bacteria,4NDV8@976|Bacteroidetes,1IPZR@117747|Sphingobacteriia	976|Bacteroidetes	M	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine	murA	-	2.5.1.7	ko:K00790	ko00520,ko00550,ko01100,map00520,map00550,map01100	-	R00660	RC00350	ko00000,ko00001,ko01000,ko01011	-	-	-	EPSP_synthase
BYD3_k127_4488753_1	1122179.KB890480_gene3093	1.572e-124	406.0	COG0142@1|root,COG0142@2|Bacteria,4NET2@976|Bacteroidetes,1INM5@117747|Sphingobacteriia	976|Bacteroidetes	H	Belongs to the FPP GGPP synthase family	ispB	-	2.5.1.90	ko:K02523	ko00900,ko01110,map00900,map01110	-	R09248	RC00279	ko00000,ko00001,ko01000,ko01006	-	-	-	polyprenyl_synt
BYD3_k127_4488753_2	760192.Halhy_3065	1.893e-100	345.0	COG3307@1|root,COG3307@2|Bacteria,4NMYT@976|Bacteroidetes	976|Bacteroidetes	M	O-Antigen ligase	-	-	-	-	-	-	-	-	-	-	-	-	Wzy_C
BYD3_k127_4488753_5	313606.M23134_06105	2.001e-07	63.0	28H89@1|root,2Z7K8@2|Bacteria,4NEKX@976|Bacteroidetes,47M3Y@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_451082_1	1121904.ARBP01000005_gene4869	8.956e-32	130.0	2CDAN@1|root,3134Z@2|Bacteria,4NNX4@976|Bacteroidetes,47XNP@768503|Cytophagia	976|Bacteroidetes	S	Gluconate 2-dehydrogenase subunit 3	-	-	-	-	-	-	-	-	-	-	-	-	Gluconate_2-dh3
BYD3_k127_451082_0	382464.ABSI01000012_gene2187	2.05e-241	759.0	COG2303@1|root,COG2303@2|Bacteria,46V0V@74201|Verrucomicrobia,2IU9F@203494|Verrucomicrobiae	203494|Verrucomicrobiae	E	GMC oxidoreductase	-	-	-	-	-	-	-	-	-	-	-	-	FAD_binding_2,GMC_oxred_C,GMC_oxred_N
BYD3_k127_451082_2	1408813.AYMG01000028_gene2499	1.468e-24	103.0	COG3622@1|root,COG3622@2|Bacteria,4NG0V@976|Bacteroidetes,1INUU@117747|Sphingobacteriia	976|Bacteroidetes	G	Hydroxypyruvate isomerase	-	-	5.3.1.22	ko:K01816	ko00630,ko01100,map00630,map01100	-	R01394	RC00511	ko00000,ko00001,ko01000	-	-	-	AP_endonuc_2
BYD3_k127_4514236_0	760192.Halhy_0135	7.625e-79	277.0	COG1138@1|root,COG1138@2|Bacteria,4NGXI@976|Bacteroidetes,1IQAC@117747|Sphingobacteriia	976|Bacteroidetes	O	PFAM Cytochrome c assembly protein	ccmF	-	-	ko:K02198	-	-	-	-	ko00000,ko02000	9.B.14.1	-	-	CcmF_C,Cytochrom_C_asm
BYD3_k127_4514236_1	1086011.HJ01_03191	8.832e-55	201.0	COG5495@1|root,COG5495@2|Bacteria,4NI4M@976|Bacteroidetes,1HZIC@117743|Flavobacteriia,2NSCI@237|Flavobacterium	976|Bacteroidetes	S	Domain of unknown function (DUF2520)	-	-	-	-	-	-	-	-	-	-	-	-	DUF2520,F420_oxidored,Rossmann-like
BYD3_k127_4514236_2	247490.KSU1_C0280	4.102e-21	104.0	2BRMQ@1|root,32KM4@2|Bacteria,2J4AR@203682|Planctomycetes	247490.KSU1_C0280|-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_4514236_3	679199.HMPREF9332_00735	0.0006629	48.0	COG1629@1|root,COG4771@2|Bacteria,4PNGC@976|Bacteroidetes,2G0T0@200643|Bacteroidia,1WDNM@1283313|Alloprevotella	976|Bacteroidetes	P	CarboxypepD_reg-like domain	-	-	-	-	-	-	-	-	-	-	-	-	CarboxypepD_reg,Plug,TonB_dep_Rec
BYD3_k127_4520315_3	1121481.AUAS01000004_gene1657	7.182e-62	235.0	COG1629@1|root,COG1629@2|Bacteria,4PKVH@976|Bacteroidetes,47K3W@768503|Cytophagia	976|Bacteroidetes	P	PFAM TonB-dependent Receptor Plug	-	-	-	-	-	-	-	-	-	-	-	-	CarbopepD_reg_2,CarboxypepD_reg,Plug
BYD3_k127_4520315_5	1168034.FH5T_16630	5.355e-26	109.0	COG4818@1|root,COG4818@2|Bacteria,4NUVP@976|Bacteroidetes	976|Bacteroidetes	S	PFAM Chloroplast import component protein (Tic20)	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_4520315_0	1122179.KB890425_gene3433	0.0	1367.0	COG0653@1|root,COG0653@2|Bacteria,4NF7C@976|Bacteroidetes,1IPHM@117747|Sphingobacteriia	976|Bacteroidetes	U	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane	secA	GO:0000166,GO:0003674,GO:0003824,GO:0005215,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005887,GO:0006810,GO:0008104,GO:0008144,GO:0008150,GO:0008320,GO:0008565,GO:0015031,GO:0015399,GO:0015405,GO:0015440,GO:0015450,GO:0015462,GO:0015833,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0022804,GO:0022857,GO:0022884,GO:0030554,GO:0031224,GO:0031226,GO:0031522,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0033036,GO:0033220,GO:0035639,GO:0036094,GO:0042623,GO:0042626,GO:0042886,GO:0042887,GO:0043167,GO:0043168,GO:0043492,GO:0043952,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0045184,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071806,GO:0071944,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:1904680	-	ko:K03070	ko02024,ko03060,ko03070,map02024,map03060,map03070	M00335	-	-	ko00000,ko00001,ko00002,ko02044	3.A.5.1,3.A.5.10,3.A.5.2,3.A.5.4	-	-	Helicase_C,SEC-C,SecA_DEAD,SecA_PP_bind,SecA_SW
BYD3_k127_4520315_4	929712.KI912613_gene2770	2.276e-50	196.0	COG4292@1|root,COG4292@2|Bacteria,2GJPB@201174|Actinobacteria,4CSJZ@84995|Rubrobacteria	84995|Rubrobacteria	S	Bacterial low temperature requirement A protein (LtrA)	-	-	-	-	-	-	-	-	-	-	-	-	LtrA
BYD3_k127_4520315_1	694427.Palpr_1296	1.178e-159	511.0	COG1088@1|root,COG1088@2|Bacteria,4NE9V@976|Bacteroidetes,2FMUH@200643|Bacteroidia,22W2K@171551|Porphyromonadaceae	976|Bacteroidetes	M	Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily	-	-	4.2.1.46	ko:K01710	ko00521,ko00523,ko00525,ko01055,ko01130,map00521,map00523,map00525,map01055,map01130	M00793	R06513	RC00402	ko00000,ko00001,ko00002,ko01000	-	-	-	GDP_Man_Dehyd
BYD3_k127_4520315_2	153721.MYP_194	3.548e-63	227.0	COG3386@1|root,COG3386@2|Bacteria,4NJKD@976|Bacteroidetes,47PXA@768503|Cytophagia	976|Bacteroidetes	G	amine dehydrogenase activity	-	-	-	-	-	-	-	-	-	-	-	-	SGL
BYD3_k127_4531439_4	886377.Murru_0116	1.07e-18	96.0	COG5343@1|root,COG5343@2|Bacteria,4NI2H@976|Bacteroidetes,1HXK4@117743|Flavobacteriia	976|Bacteroidetes	S	Anti-sigma-K factor RskA	-	-	-	-	-	-	-	-	-	-	-	-	RskA
BYD3_k127_4531439_2	1317122.ATO12_01350	2.436e-50	182.0	COG0454@1|root,COG0456@2|Bacteria,4NQPC@976|Bacteroidetes,1IB8U@117743|Flavobacteriia	976|Bacteroidetes	K	Acetyltransferase (GNAT) family	-	-	-	-	-	-	-	-	-	-	-	-	Acetyltransf_1
BYD3_k127_4531439_1	1121129.KB903359_gene2323	4.62e-72	249.0	COG0164@1|root,COG0164@2|Bacteria,4NGVR@976|Bacteroidetes,2FMS7@200643|Bacteroidia,22WJC@171551|Porphyromonadaceae	976|Bacteroidetes	L	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids	rnhB	GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004523,GO:0004540,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006271,GO:0006273,GO:0006281,GO:0006298,GO:0006401,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009987,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0019439,GO:0022616,GO:0032299,GO:0032991,GO:0033554,GO:0033567,GO:0034641,GO:0034645,GO:0034655,GO:0043137,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044270,GO:0044424,GO:0044464,GO:0046483,GO:0046700,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0140098,GO:1901360,GO:1901361,GO:1901575,GO:1901576	3.1.26.4	ko:K03470	ko03030,map03030	-	-	-	ko00000,ko00001,ko01000,ko03032	-	-	-	RNase_HII
BYD3_k127_4531439_3	1313421.JHBV01000029_gene2009	3.916e-48	189.0	COG2885@1|root,COG2885@2|Bacteria,4NKCW@976|Bacteroidetes	976|Bacteroidetes	M	Belongs to the ompA family	-	-	-	-	-	-	-	-	-	-	-	-	OmpA
BYD3_k127_4531439_5	376686.Fjoh_4418	5.321e-11	68.0	COG0640@1|root,COG0640@2|Bacteria,4NQK3@976|Bacteroidetes,1I2TQ@117743|Flavobacteriia,2NWRF@237|Flavobacterium	976|Bacteroidetes	K	ArsR family transcriptional regulator	-	-	-	-	-	-	-	-	-	-	-	-	HTH_20,HTH_5
BYD3_k127_4531439_0	1122176.KB903570_gene4808	0.0	1096.0	COG0730@1|root,COG0730@2|Bacteria,4PP1E@976|Bacteroidetes,1J0WY@117747|Sphingobacteriia	976|Bacteroidetes	S	Protein of unknown function (DUF2723)	-	-	-	-	-	-	-	-	-	-	-	-	DUF2723
BYD3_k127_4541524_5	515635.Dtur_0894	7.906e-87	291.0	COG3842@1|root,COG3842@2|Bacteria	2|Bacteria	P	ATPase activity	msmX	-	-	ko:K10112	ko02010,map02010	M00194,M00196,M00197,M00200,M00201,M00206,M00207,M00491,M00602,M00605,M00606	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.1	-	-	ABC_tran,TOBE,TOBE_2
BYD3_k127_4541524_4	1166018.FAES_1554	3.53e-96	329.0	COG1331@1|root,COG1331@2|Bacteria,4NPQI@976|Bacteroidetes	976|Bacteroidetes	O	Highly conserved protein containing a thioredoxin domain	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_4541524_2	1122176.KB903547_gene1093	9.681e-107	361.0	COG2152@1|root,COG2152@2|Bacteria,4NG76@976|Bacteroidetes,1IPYN@117747|Sphingobacteriia	976|Bacteroidetes	G	Glycosidase	-	-	-	-	-	-	-	-	-	-	-	-	Glyco_hydro_130
BYD3_k127_4541524_3	1122176.KB903547_gene1094	3.743e-105	347.0	COG0395@1|root,COG0395@2|Bacteria,4NN72@976|Bacteroidetes	976|Bacteroidetes	G	Binding-protein-dependent transport system inner membrane component	-	-	-	ko:K02026	-	M00207	-	-	ko00000,ko00002,ko02000	3.A.1.1	-	-	BPD_transp_1
BYD3_k127_4541524_1	1122176.KB903547_gene1095	6.779e-118	385.0	COG1175@1|root,COG1175@2|Bacteria,4NHRQ@976|Bacteroidetes	976|Bacteroidetes	G	Binding-protein-dependent transport system inner membrane component	-	-	-	-	-	-	-	-	-	-	-	-	BPD_transp_1
BYD3_k127_4541524_0	1166018.FAES_1551	1.396e-142	464.0	COG1653@1|root,COG1653@2|Bacteria,4NJ41@976|Bacteroidetes	976|Bacteroidetes	G	Bacterial extracellular solute-binding protein	-	-	-	ko:K02027	-	M00207	-	-	ko00000,ko00002,ko02000	3.A.1.1	-	-	SBP_bac_8
BYD3_k127_4541524_6	1122176.KB903547_gene1101	1.213e-50	184.0	COG2207@1|root,COG2207@2|Bacteria,4NEVG@976|Bacteroidetes,1IPBJ@117747|Sphingobacteriia	976|Bacteroidetes	K	AraC type	-	-	-	-	-	-	-	-	-	-	-	-	HTH_18
BYD3_k127_4562748_3	485918.Cpin_4197	3.414e-22	106.0	COG4733@1|root,COG4733@2|Bacteria,4PKY7@976|Bacteroidetes,1J0NC@117747|Sphingobacteriia	976|Bacteroidetes	O	Fibronectin type III domain protein	-	-	-	-	-	-	-	-	-	-	-	-	MAM,PPC,Reprolysin_4,fn3
BYD3_k127_4562748_2	760192.Halhy_0332	1.857e-41	158.0	COG0848@1|root,COG0848@2|Bacteria,4NMQ8@976|Bacteroidetes,1ITNF@117747|Sphingobacteriia	976|Bacteroidetes	U	PFAM Biopolymer transport protein ExbD TolR	exbD2	-	-	-	-	-	-	-	-	-	-	-	ExbD
BYD3_k127_4562748_0	760192.Halhy_0356	6.072e-245	767.0	COG4146@1|root,COG4146@2|Bacteria,4NE9S@976|Bacteroidetes,1INQD@117747|Sphingobacteriia	976|Bacteroidetes	S	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family	-	-	-	ko:K03307	-	-	-	-	ko00000	2.A.21	-	-	SSF
BYD3_k127_4562748_1	945713.IALB_2618	4.699e-139	446.0	COG3033@1|root,COG3033@2|Bacteria	2|Bacteria	E	tryptophanase activity	tnaA	-	4.1.99.1	ko:K01667	ko00380,map00380	-	R00673	RC00209,RC00355	ko00000,ko00001,ko01000	-	-	-	Beta_elim_lyase
BYD3_k127_4590081_1	743722.Sph21_1685	1.383e-82	285.0	COG0508@1|root,COG0508@2|Bacteria,4NF33@976|Bacteroidetes,1IP4Q@117747|Sphingobacteriia	976|Bacteroidetes	C	The 2-oxoglutarate dehydrogenase complex catalyzes the overall conversion of 2-oxoglutarate to succinyl-CoA and CO(2)	sucB	-	2.3.1.61	ko:K00658	ko00020,ko00310,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00310,map01100,map01110,map01120,map01130,map01200	M00009,M00011,M00032	R02570,R02571,R08549	RC00004,RC02727,RC02833	br01601,ko00000,ko00001,ko00002,ko01000	-	-	-	2-oxoacid_dh,Biotin_lipoyl,E3_binding
BYD3_k127_4590081_2	1173020.Cha6605_5378	3.489e-54	192.0	COG0614@1|root,COG0614@2|Bacteria,1G79B@1117|Cyanobacteria	1117|Cyanobacteria	P	PD-(D/E)XK nuclease superfamily	-	-	-	-	-	-	-	-	-	-	-	-	PDDEXK_3
BYD3_k127_4590081_0	1122176.KB903549_gene1273	1.036e-293	909.0	COG0173@1|root,COG0173@2|Bacteria,4NECY@976|Bacteroidetes,1IR7B@117747|Sphingobacteriia	976|Bacteroidetes	J	Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp)	aspS	-	6.1.1.12	ko:K01876	ko00970,map00970	M00359,M00360	R05577	RC00055,RC00523	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029	-	-	-	GAD,tRNA-synt_2,tRNA_anti-codon
BYD3_k127_4604448_1	1358423.N180_15840	4.654e-89	298.0	COG0151@1|root,COG0151@2|Bacteria,4NEUN@976|Bacteroidetes,1IPBB@117747|Sphingobacteriia	976|Bacteroidetes	F	Belongs to the GARS family	purD	-	6.3.4.13	ko:K01945	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	M00048	R04144	RC00090,RC00166	ko00000,ko00001,ko00002,ko01000	-	-	-	GARS_A,GARS_C,GARS_N
BYD3_k127_4604448_3	472759.Nhal_3914	3.606e-20	92.0	COG1724@1|root,COG1724@2|Bacteria,1P71K@1224|Proteobacteria	1224|Proteobacteria	N	HicA toxin of bacterial toxin-antitoxin,	-	-	-	-	-	-	-	-	-	-	-	-	HicA_toxin
BYD3_k127_4604448_4	1150474.JQJI01000036_gene884	9.921e-19	88.0	COG1598@1|root,COG1598@2|Bacteria,2GDGG@200918|Thermotogae	200918|Thermotogae	S	PFAM Uncharacterised protein family UPF0150	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_4604448_2	760192.Halhy_1987	2.496e-54	198.0	COG0632@1|root,COG0632@2|Bacteria,4NF4E@976|Bacteroidetes,1IQBR@117747|Sphingobacteriia	976|Bacteroidetes	L	The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB	ruvA	-	3.6.4.12	ko:K03550	ko03440,map03440	-	-	-	ko00000,ko00001,ko01000,ko03400	-	-	-	HHH_5,RuvA_C,RuvA_N
BYD3_k127_4604448_0	1122176.KB903543_gene688	2.255e-302	951.0	COG1747@1|root,COG1747@2|Bacteria,4NEB8@976|Bacteroidetes,1INS4@117747|Sphingobacteriia	976|Bacteroidetes	S	Motility related/secretion protein	sprA	-	-	-	-	-	-	-	-	-	-	-	SprA_N
BYD3_k127_4604448_5	1122176.KB903543_gene688	1.319e-16	82.0	COG1747@1|root,COG1747@2|Bacteria,4NEB8@976|Bacteroidetes,1INS4@117747|Sphingobacteriia	976|Bacteroidetes	S	Motility related/secretion protein	sprA	-	-	-	-	-	-	-	-	-	-	-	SprA_N
BYD3_k127_4643758_1	1122176.KB903540_gene128	6.716e-100	338.0	COG1132@1|root,COG1132@2|Bacteria,4NE2D@976|Bacteroidetes,1IQ58@117747|Sphingobacteriia	976|Bacteroidetes	V	ABC transporter	msbA	-	-	ko:K06147,ko:K11085	ko02010,map02010	-	-	-	ko00000,ko00001,ko01000,ko02000	3.A.1.106,3.A.1.109,3.A.1.21	-	-	ABC_membrane,ABC_tran
BYD3_k127_4643758_0	1122176.KB903540_gene125	2.547e-242	753.0	COG0439@1|root,COG0439@2|Bacteria,4NFEQ@976|Bacteroidetes,1INM0@117747|Sphingobacteriia	976|Bacteroidetes	I	acetyl-CoA carboxylase, biotin carboxylase	accC	-	6.3.4.14,6.4.1.2	ko:K01961	ko00061,ko00620,ko00640,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00061,map00620,map00640,map00720,map01100,map01110,map01120,map01130,map01200,map01212	M00082,M00376	R00742,R04385	RC00040,RC00253,RC00367	ko00000,ko00001,ko00002,ko01000	-	-	-	Biotin_carb_C,Biotin_carb_N,CPSase_L_D2
BYD3_k127_4643758_2	760192.Halhy_2516	2.805e-48	178.0	COG0511@1|root,COG0511@2|Bacteria,4NM8U@976|Bacteroidetes,1ISET@117747|Sphingobacteriia	976|Bacteroidetes	I	first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA	accB	-	-	ko:K02160	ko00061,ko00620,ko00640,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00061,map00620,map00640,map00720,map01100,map01110,map01120,map01130,map01200,map01212	M00082,M00376	R00742	RC00040,RC00367	ko00000,ko00001,ko00002	-	-	-	Biotin_lipoyl
BYD3_k127_4645313_0	929703.KE386491_gene1199	2.445e-285	895.0	COG0841@1|root,COG0841@2|Bacteria,4NDZG@976|Bacteroidetes,47K8C@768503|Cytophagia	976|Bacteroidetes	V	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family	bepE_4	-	-	ko:K03296,ko:K18138	ko01501,ko01503,map01501,map01503	M00647,M00699,M00718	-	-	ko00000,ko00001,ko00002,ko01504,ko02000	2.A.6.2	-	-	ACR_tran
BYD3_k127_4645313_3	700598.Niako_0572	3.07e-36	141.0	2DSW4@1|root,33HNK@2|Bacteria,4NW6Z@976|Bacteroidetes	976|Bacteroidetes	J	Ribosomal protein S23	-	-	-	-	-	-	-	-	-	-	-	-	23S_rRNA_IVP
BYD3_k127_4645313_2	700598.Niako_2567	3.35e-97	329.0	COG0845@1|root,COG0845@2|Bacteria,4NERP@976|Bacteroidetes,1IQN0@117747|Sphingobacteriia	976|Bacteroidetes	M	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family	-	-	-	ko:K03585	ko01501,ko01503,map01501,map01503	M00646,M00647,M00699,M00718	-	-	ko00000,ko00001,ko00002,ko01504,ko02000,ko03036	2.A.6.2,8.A.1.6	-	-	HlyD_D23
BYD3_k127_4645313_1	1121904.ARBP01000006_gene3699	4.931e-108	358.0	COG3622@1|root,COG3622@2|Bacteria,4PM6P@976|Bacteroidetes,47YPG@768503|Cytophagia	976|Bacteroidetes	G	Xylose isomerase-like TIM barrel	-	-	-	-	-	-	-	-	-	-	-	-	AP_endonuc_2
BYD3_k127_4660758_1	1122176.KB903534_gene2200	4.377e-66	231.0	COG2067@1|root,COG2067@2|Bacteria,4NIU4@976|Bacteroidetes,1IQ3Y@117747|Sphingobacteriia	976|Bacteroidetes	I	protein CHP03519, membrane, Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	PorP_SprF
BYD3_k127_4660758_3	1341181.FLJC2902T_30970	1.173e-32	137.0	2BV83@1|root,32QMR@2|Bacteria,4PCCP@976|Bacteroidetes,1ICZ9@117743|Flavobacteriia,2NWB9@237|Flavobacterium	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_4660758_4	7668.SPU_025120-tr	7.76e-06	55.0	KOG1225@1|root,KOG1225@2759|Eukaryota	2759|Eukaryota	L	regulation of canonical Wnt signaling pathway involved in osteoblast differentiation	-	-	-	ko:K14724	-	-	-	-	ko00000,ko02000	2.A.36.1.12,2.A.36.1.9	-	-	hEGF
BYD3_k127_4660758_0	926549.KI421517_gene1451	1.575e-128	440.0	COG2203@1|root,COG2203@2|Bacteria,4NE84@976|Bacteroidetes,47K2E@768503|Cytophagia	976|Bacteroidetes	T	Gaf domain	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_4661077_0	592029.DDD_2186	8.064e-146	469.0	COG0183@1|root,COG0183@2|Bacteria,4NE3Q@976|Bacteroidetes,1HWZU@117743|Flavobacteriia,3HJMJ@363408|Nonlabens	976|Bacteroidetes	I	Thiolase, C-terminal domain	pcaF	-	-	-	-	-	-	-	-	-	-	-	Thiolase_C,Thiolase_N
BYD3_k127_4661077_3	1122605.KB893638_gene3445	2.04e-34	133.0	COG2270@1|root,COG2270@2|Bacteria,4PNZE@976|Bacteroidetes	976|Bacteroidetes	S	Nucleoside H+ symporter	-	-	-	-	-	-	-	-	-	-	-	-	Nuc_H_symport
BYD3_k127_4661077_1	1004785.AMBLS11_01660	3.351e-134	435.0	COG0477@1|root,COG2814@2|Bacteria,1QWEI@1224|Proteobacteria,1T3J4@1236|Gammaproteobacteria,46D5S@72275|Alteromonadaceae	1236|Gammaproteobacteria	EGP	LacY proton/sugar symporter	-	-	-	ko:K05820	-	-	-	-	ko00000,ko02000	2.A.1.27	-	-	Nuc_H_symport
BYD3_k127_4661077_2	1515746.HR45_01640	2.009e-41	161.0	COG1680@1|root,COG1680@2|Bacteria,1R49D@1224|Proteobacteria,1SMGN@1236|Gammaproteobacteria,2QCWR@267890|Shewanellaceae	1236|Gammaproteobacteria	V	Beta-lactamase	-	-	-	-	-	-	-	-	-	-	-	-	Beta-lactamase
BYD3_k127_472384_2	1121897.AUGO01000003_gene1829	0.0009726	42.0	COG3104@1|root,COG3104@2|Bacteria,4NE8R@976|Bacteroidetes,1HWTF@117743|Flavobacteriia,2NT1X@237|Flavobacterium	976|Bacteroidetes	E	amino acid	-	-	-	ko:K03305	-	-	-	-	ko00000	2.A.17	-	-	PTR2
BYD3_k127_472384_0	1122176.KB903536_gene1801	3.487e-100	356.0	COG0384@1|root,COG0384@2|Bacteria,4P4WG@976|Bacteroidetes	976|Bacteroidetes	S	phenazine biosynthesis protein PhzF	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_472384_1	1313421.JHBV01000046_gene281	4.078e-49	195.0	COG0384@1|root,COG0384@2|Bacteria,4P4WG@976|Bacteroidetes	976|Bacteroidetes	S	phenazine biosynthesis protein PhzF	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_4732071_1	760192.Halhy_4227	1.428e-26	114.0	COG1785@1|root,COG1785@2|Bacteria,4NG3D@976|Bacteroidetes,1IPXF@117747|Sphingobacteriia	976|Bacteroidetes	P	Belongs to the alkaline phosphatase family	-	-	3.1.3.1	ko:K01077	ko00730,ko00790,ko01100,ko02020,map00730,map00790,map01100,map02020	M00126	R02135,R04620	RC00017	ko00000,ko00001,ko00002,ko00537,ko01000,ko04147	-	-	-	Alk_phosphatase
BYD3_k127_4732071_0	760192.Halhy_4228	2.723e-110	367.0	COG0758@1|root,COG1948@1|root,COG0758@2|Bacteria,COG1948@2|Bacteria,4NF7T@976|Bacteroidetes,1IPSK@117747|Sphingobacteriia	976|Bacteroidetes	L	DNA protecting protein DprA	dprA	-	-	ko:K04096	-	-	-	-	ko00000	-	-	-	DNA_processg_A,HHH_5
BYD3_k127_4732071_2	760192.Halhy_2468	1.247e-18	93.0	COG0457@1|root,COG0457@2|Bacteria,4NMZG@976|Bacteroidetes,1IZUU@117747|Sphingobacteriia	976|Bacteroidetes	S	Tetratricopeptide repeat	-	-	-	-	-	-	-	-	-	-	-	-	DUF1736,PMT_2,TPR_16,TPR_2,TPR_8
BYD3_k127_4735948_0	468059.AUHA01000005_gene2462	2.321e-90	314.0	COG2197@1|root,COG3292@1|root,COG2197@2|Bacteria,COG3292@2|Bacteria,4NG28@976|Bacteroidetes,1IQJ9@117747|Sphingobacteriia	976|Bacteroidetes	KT	Y_Y_Y domain	-	-	-	-	-	-	-	-	-	-	-	-	GerE,Reg_prop,Y_Y_Y
BYD3_k127_4735948_3	1270193.JARP01000001_gene2601	7.75e-21	101.0	COG3291@1|root,COG3291@2|Bacteria,4NHAX@976|Bacteroidetes,1HX1Y@117743|Flavobacteriia,2NT4M@237|Flavobacterium	976|Bacteroidetes	G	Pkd domain containing protein	-	-	-	-	-	-	-	-	-	-	-	-	CBM_4_9
BYD3_k127_4735948_4	1121890.AUDO01000011_gene492	1.22e-06	61.0	COG3291@1|root,COG3291@2|Bacteria,4NHAX@976|Bacteroidetes,1HX1Y@117743|Flavobacteriia,2NT4M@237|Flavobacterium	976|Bacteroidetes	G	Pkd domain containing protein	-	-	-	-	-	-	-	-	-	-	-	-	PKD
BYD3_k127_4735948_2	1121481.AUAS01000004_gene1332	6.865e-24	105.0	COG1629@1|root,COG4771@2|Bacteria,4P1Z5@976|Bacteroidetes,47KT8@768503|Cytophagia	976|Bacteroidetes	P	TIGRFAM TonB-dependent outer membrane receptor, SusC RagA subfamily, signature region	-	-	-	-	-	-	-	-	-	-	-	-	CarbopepD_reg_2,Plug,TonB_dep_Rec
BYD3_k127_4746136_2	1122176.KB903546_gene1027	0.0009645	43.0	COG0265@1|root,COG3291@1|root,COG0265@2|Bacteria,COG3291@2|Bacteria,4PKTY@976|Bacteroidetes	976|Bacteroidetes	O	ASPIC and UnbV	-	-	-	-	-	-	-	-	-	-	-	-	FG-GAP,MAM,UnbV_ASPIC,VCBS,fn3
BYD3_k127_4746136_1	153721.MYP_3529	2.297e-33	143.0	2DBXV@1|root,2ZBR7@2|Bacteria,4NNEK@976|Bacteroidetes,47U2F@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_4746136_0	421072.IO89_05505	1.404e-142	474.0	COG1752@1|root,COG1752@2|Bacteria,4NEFI@976|Bacteroidetes,1I1PR@117743|Flavobacteriia,3HIN2@358033|Chryseobacterium	976|Bacteroidetes	S	Patatin-like phospholipase	-	-	-	-	-	-	-	-	-	-	-	-	Patatin
BYD3_k127_4756022_1	1123248.KB893386_gene1916	1.605e-125	412.0	COG0845@1|root,COG0845@2|Bacteria,4NITE@976|Bacteroidetes,1ISHH@117747|Sphingobacteriia	976|Bacteroidetes	M	SPTR Efflux transporter, RND family, MFP subunit	-	-	-	ko:K02005	-	-	-	-	ko00000	-	-	-	HlyD_3,HlyD_D23
BYD3_k127_4756022_0	929703.KE386491_gene2811	4.363e-177	563.0	COG4591@1|root,COG4591@2|Bacteria,4NHBR@976|Bacteroidetes,47MB4@768503|Cytophagia	976|Bacteroidetes	M	COGs COG4591 ABC-type transport system involved in lipoprotein release permease component	lolC	-	-	ko:K09808	ko02010,map02010	M00255	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.125	-	-	FtsX,MacB_PCD
BYD3_k127_4765937_1	471854.Dfer_2254	2.732e-57	213.0	COG2972@1|root,COG2972@2|Bacteria,4NFDP@976|Bacteroidetes,47N4N@768503|Cytophagia	976|Bacteroidetes	T	PFAM histidine kinase internal region	-	-	-	-	-	-	-	-	-	-	-	-	His_kinase
BYD3_k127_4765937_0	1123248.KB893348_gene324	1.055e-80	281.0	COG2972@1|root,COG2972@2|Bacteria,4NN11@976|Bacteroidetes,1IXVB@117747|Sphingobacteriia	976|Bacteroidetes	T	Histidine kinase	-	-	-	-	-	-	-	-	-	-	-	-	His_kinase
BYD3_k127_4765937_2	1122179.KB890415_gene1999	2.922e-45	189.0	COG3291@1|root,COG4412@1|root,COG3291@2|Bacteria,COG4412@2|Bacteria,4NYN2@976|Bacteroidetes,1IXQ8@117747|Sphingobacteriia	976|Bacteroidetes	G	Reprolysin (M12B) family zinc metalloprotease	-	-	-	-	-	-	-	-	-	-	-	-	PKD,Reprolysin_5
BYD3_k127_4765937_4	655815.ZPR_2850	7.089e-18	99.0	COG5295@1|root,COG5295@2|Bacteria,4NRVP@976|Bacteroidetes,1I3PZ@117743|Flavobacteriia	976|Bacteroidetes	UW	Hep Hag repeat protein	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_4765937_5	1089547.KB913013_gene41	3.681e-11	77.0	2BYZ4@1|root,33NKY@2|Bacteria,4P3HA@976|Bacteroidetes,47V5X@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_4765937_3	385682.AFSL01000015_gene2653	1.033e-18	87.0	COG1598@1|root,COG1598@2|Bacteria,4NRY6@976|Bacteroidetes	976|Bacteroidetes	S	PFAM Uncharacterised protein family UPF0150	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_4766964_1	760192.Halhy_3047	3.683e-22	111.0	COG3209@1|root,COG3209@2|Bacteria	2|Bacteria	M	self proteolysis	-	-	-	-	-	-	-	-	-	-	-	-	He_PIG,RHS_repeat
BYD3_k127_4766964_0	1122176.KB903551_gene4247	2.772e-85	290.0	COG1858@1|root,COG1858@2|Bacteria,4NE4P@976|Bacteroidetes,1INRI@117747|Sphingobacteriia	976|Bacteroidetes	C	cytochrome C peroxidase	-	-	1.11.1.5	ko:K00428	-	-	-	-	ko00000,ko01000	-	-	-	CCP_MauG
BYD3_k127_4770951_3	1123248.KB893315_gene3111	6.342e-09	57.0	COG0640@1|root,COG0640@2|Bacteria,4NQK3@976|Bacteroidetes,1IYKS@117747|Sphingobacteriia	976|Bacteroidetes	K	helix_turn_helix, Arsenical Resistance Operon Repressor	-	-	-	-	-	-	-	-	-	-	-	-	HTH_20,HTH_5
BYD3_k127_4770951_0	1123057.P872_05260	2.594e-125	418.0	COG0469@1|root,COG0469@2|Bacteria,4NGQX@976|Bacteroidetes,47T9Y@768503|Cytophagia	976|Bacteroidetes	G	Pyruvate kinase, barrel domain	-	-	2.7.1.40	ko:K00873	ko00010,ko00230,ko00620,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko04930,ko05165,ko05203,ko05230,map00010,map00230,map00620,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map04930,map05165,map05203,map05230	M00001,M00002,M00049,M00050	R00200,R00430,R01138,R01858,R02320	RC00002,RC00015	ko00000,ko00001,ko00002,ko01000,ko04131,ko04147	-	-	-	PK
BYD3_k127_4770951_2	1233950.IW22_10665	4.652e-20	96.0	2BXS1@1|root,32R1W@2|Bacteria,4NR82@976|Bacteroidetes,1I74U@117743|Flavobacteriia,3ZRUG@59732|Chryseobacterium	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_4770951_1	1454004.AW11_01555	4.421e-54	199.0	COG2931@1|root,COG2931@2|Bacteria,1NMET@1224|Proteobacteria,2W6HS@28216|Betaproteobacteria	28216|Betaproteobacteria	Q	PEP-CTERM motif	-	-	-	-	-	-	-	-	-	-	-	-	VPEP
BYD3_k127_4778981_1	760192.Halhy_5346	2.947e-114	374.0	COG0847@1|root,COG0847@2|Bacteria,4NE82@976|Bacteroidetes,1IPA8@117747|Sphingobacteriia	976|Bacteroidetes	L	DNA polymerase III	-	-	2.7.7.7	ko:K02342	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	M00260	R00375,R00376,R00377,R00378	RC02795	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	-	-	-	RNase_T
BYD3_k127_4778981_2	1122176.KB903598_gene4636	7.585e-114	379.0	COG0019@1|root,COG0019@2|Bacteria,4NE7X@976|Bacteroidetes,1INXN@117747|Sphingobacteriia	976|Bacteroidetes	E	Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine	lysA	-	4.1.1.20	ko:K01586	ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00300,map01100,map01110,map01120,map01130,map01230	M00016,M00525,M00526,M00527	R00451	RC00299	ko00000,ko00001,ko00002,ko01000	-	-	-	Orn_Arg_deC_N,Orn_DAP_Arg_deC
BYD3_k127_4778981_3	880071.Fleli_0749	1.382e-69	253.0	COG2027@1|root,COG2027@2|Bacteria,4NGIQ@976|Bacteroidetes,47JKB@768503|Cytophagia	976|Bacteroidetes	M	PFAM D-Ala-D-Ala carboxypeptidase 3 (S13) family	dacB	-	3.4.16.4	ko:K07259	ko00550,map00550	-	-	-	ko00000,ko00001,ko01000,ko01002,ko01011	-	-	-	Peptidase_S13
BYD3_k127_4778981_4	1122179.KB890444_gene5019	4.903e-25	109.0	COG5349@1|root,COG5349@2|Bacteria,4NQ87@976|Bacteroidetes,1ITU7@117747|Sphingobacteriia	976|Bacteroidetes	S	Protein of unknown function (DUF983)	-	-	-	-	-	-	-	-	-	-	-	-	DUF983
BYD3_k127_4778981_0	760192.Halhy_6353	2.908e-292	910.0	COG0464@1|root,COG0464@2|Bacteria,4NJBD@976|Bacteroidetes,1ISED@117747|Sphingobacteriia	976|Bacteroidetes	O	of the AAA class	-	-	-	-	-	-	-	-	-	-	-	-	AAA
BYD3_k127_4793565_1	1122176.KB903619_gene5435	2.148e-141	462.0	COG0006@1|root,COG0006@2|Bacteria,4NG40@976|Bacteroidetes,1IPQC@117747|Sphingobacteriia	976|Bacteroidetes	E	Peptidase M24B, X-Pro dipeptidase aminopeptidase	pepP	-	3.4.11.9	ko:K01262	-	-	-	-	ko00000,ko01000,ko01002	-	-	-	AMP_N,Peptidase_M24
BYD3_k127_4793565_3	641524.ADICYQ_3351	1.083e-56	205.0	COG1086@1|root,COG1086@2|Bacteria,4P388@976|Bacteroidetes,47UVZ@768503|Cytophagia	976|Bacteroidetes	GM	Methyltransferase domain	-	-	-	-	-	-	-	-	-	-	-	-	Methyltransf_24
BYD3_k127_4793565_4	491205.JARQ01000009_gene3317	1.962e-34	141.0	COG0451@1|root,COG0451@2|Bacteria,4NKBM@976|Bacteroidetes,1I14B@117743|Flavobacteriia,3ZR98@59732|Chryseobacterium	976|Bacteroidetes	GM	NAD-dependent epimerase	-	-	-	-	-	-	-	-	-	-	-	-	Epimerase
BYD3_k127_4793565_2	1305737.JAFX01000001_gene334	4.671e-63	229.0	COG0438@1|root,COG0438@2|Bacteria,4NNVW@976|Bacteroidetes,47U22@768503|Cytophagia	976|Bacteroidetes	M	Glycosyl transferases group 1	-	-	-	-	-	-	-	-	-	-	-	-	Glyco_trans_1_4,Glycos_transf_1
BYD3_k127_4793565_0	1137281.D778_00358	4.414e-217	686.0	COG0308@1|root,COG0308@2|Bacteria,4NGUB@976|Bacteroidetes,1HXVD@117743|Flavobacteriia	976|Bacteroidetes	E	peptidase M1	-	-	-	-	-	-	-	-	-	-	-	-	Peptidase_M1
BYD3_k127_4840341_1	234267.Acid_5059	1.42e-130	421.0	28IJ3@1|root,2Z8K2@2|Bacteria,3Y2NN@57723|Acidobacteria	57723|Acidobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_4840341_0	204669.Acid345_1379	9.621e-185	586.0	COG2837@1|root,COG2837@2|Bacteria,3Y3R0@57723|Acidobacteria,2JKNY@204432|Acidobacteriia	204432|Acidobacteriia	P	iron assimilation	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_486669_1	760192.Halhy_3391	4.005e-40	151.0	COG3695@1|root,COG3695@2|Bacteria,4NQ34@976|Bacteroidetes,1IT8P@117747|Sphingobacteriia	976|Bacteroidetes	L	PFAM 6-O-methylguanine DNA methyltransferase, DNA binding domain	ogt	-	2.1.1.63	ko:K00567,ko:K07443	-	-	-	-	ko00000,ko01000,ko03400	-	-	-	DNA_binding_1
BYD3_k127_486669_2	886379.AEWI01000146_gene3224	0.0009548	51.0	COG2273@1|root,COG2273@2|Bacteria,4NRWG@976|Bacteroidetes,2FXTD@200643|Bacteroidia,3XKPP@558415|Marinilabiliaceae	976|Bacteroidetes	G	Glycosyl hydrolases family 16	-	-	-	-	-	-	-	-	-	-	-	-	Glyco_hydro_16
BYD3_k127_486669_0	1408813.AYMG01000012_gene908	1.745e-60	216.0	COG1476@1|root,COG2932@1|root,COG1476@2|Bacteria,COG2932@2|Bacteria,4NDUW@976|Bacteroidetes,1IQ7T@117747|Sphingobacteriia	976|Bacteroidetes	K	transcriptional regulator	-	-	-	-	-	-	-	-	-	-	-	-	HTH_19,HTH_3,Peptidase_S24
BYD3_k127_4904221_1	1122176.KB903532_gene2570	3.759e-111	370.0	COG0760@1|root,COG0760@2|Bacteria,4NEW0@976|Bacteroidetes,1IQB4@117747|Sphingobacteriia	976|Bacteroidetes	O	peptidylprolyl isomerase	surA	-	5.2.1.8	ko:K03771	-	-	-	-	ko00000,ko01000,ko03110	-	-	-	Rotamase,SurA_N_3
BYD3_k127_4904221_2	760192.Halhy_3972	1.799e-49	187.0	COG0760@1|root,COG0760@2|Bacteria,4NG2P@976|Bacteroidetes,1IYQF@117747|Sphingobacteriia	976|Bacteroidetes	O	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation	-	-	-	-	-	-	-	-	-	-	-	-	Rotamase_2
BYD3_k127_4904221_0	760192.Halhy_3971	4.692e-164	538.0	COG0760@1|root,COG0760@2|Bacteria,4NGIR@976|Bacteroidetes,1IPZ1@117747|Sphingobacteriia	976|Bacteroidetes	O	PPIC-type PPIASE domain	-	-	5.2.1.8	ko:K03771	-	-	-	-	ko00000,ko01000,ko03110	-	-	-	Rotamase,Rotamase_2,Rotamase_3
BYD3_k127_4908220_2	1313421.JHBV01000003_gene617	4.088e-41	169.0	COG4219@1|root,COG4219@2|Bacteria,4NDWS@976|Bacteroidetes	976|Bacteroidetes	KT	Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins	-	-	-	-	-	-	-	-	-	-	-	-	CarbopepD_reg_2,Peptidase_M56,Plug,TonB_C
BYD3_k127_4908220_1	1313421.JHBV01000003_gene618	2.596e-42	158.0	COG3682@1|root,COG3682@2|Bacteria,4NNVM@976|Bacteroidetes,1J0EU@117747|Sphingobacteriia	976|Bacteroidetes	K	Penicillinase repressor	-	-	-	-	-	-	-	-	-	-	-	-	Penicillinase_R
BYD3_k127_4908220_3	1121904.ARBP01000005_gene4824	3.848e-34	135.0	2DPIW@1|root,332A0@2|Bacteria,4NUNN@976|Bacteroidetes,47T5G@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_4908220_0	760192.Halhy_5178	1.085e-53	196.0	COG0664@1|root,COG0664@2|Bacteria,4NKW5@976|Bacteroidetes	976|Bacteroidetes	K	- catabolite gene activator and regulatory subunit of cAMP-dependent protein	-	-	-	-	-	-	-	-	-	-	-	-	HTH_Crp_2,cNMP_binding
BYD3_k127_4908220_4	1122176.KB903531_gene3140	1.525e-07	54.0	2DQSW@1|root,338FU@2|Bacteria	2|Bacteria	S	Domain of unknown function (DUF4249)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4249
BYD3_k127_4911526_2	929562.Emtol_0761	6.344e-26	109.0	COG1670@1|root,COG1670@2|Bacteria,4NNZZ@976|Bacteroidetes,47QMT@768503|Cytophagia	976|Bacteroidetes	J	Acetyltransferase (GNAT) domain	-	-	-	-	-	-	-	-	-	-	-	-	Acetyltransf_3
BYD3_k127_4911526_0	1283300.ATXB01000002_gene2921	1.256e-205	654.0	COG0281@1|root,COG0281@2|Bacteria,1MU0A@1224|Proteobacteria,1RQ11@1236|Gammaproteobacteria,1XEW9@135618|Methylococcales	135618|Methylococcales	C	Malic enzyme, NAD binding domain	-	-	1.1.1.38	ko:K00027	ko00620,ko01200,ko02020,map00620,map01200,map02020	-	R00214	RC00105	ko00000,ko00001,ko01000	-	-	-	Malic_M,malic
BYD3_k127_4911526_1	1046627.BZARG_2337	1.723e-39	155.0	COG2339@1|root,COG2339@2|Bacteria,4NGUS@976|Bacteroidetes,1HY3J@117743|Flavobacteriia	976|Bacteroidetes	S	Protease prsW family	-	-	-	-	-	-	-	-	-	-	-	-	PrsW-protease
BYD3_k127_4950116_0	991.IW20_23440	3.493e-208	652.0	COG3119@1|root,COG3119@2|Bacteria,4NEBN@976|Bacteroidetes,1HZSK@117743|Flavobacteriia,2NT8T@237|Flavobacterium	976|Bacteroidetes	P	Sulfatase	-	-	3.1.6.1	ko:K01130	ko00140,ko00600,map00140,map00600	-	R03980,R04856	RC00128,RC00231	ko00000,ko00001,ko01000	-	-	-	Sulfatase
BYD3_k127_4950116_1	991.IW20_14005	5.554e-206	651.0	COG5361@1|root,COG5361@2|Bacteria,4NKSK@976|Bacteroidetes,1IARY@117743|Flavobacteriia,2NVCS@237|Flavobacterium	976|Bacteroidetes	S	Protein of unknown function (DUF1254)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1214,DUF1254
BYD3_k127_4950116_5	1270193.JARP01000002_gene650	2.522e-96	321.0	COG3637@1|root,COG3637@2|Bacteria,4NMMV@976|Bacteroidetes,1I1GG@117743|Flavobacteriia,2NV3Q@237|Flavobacterium	976|Bacteroidetes	M	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_4950116_4	760192.Halhy_2909	9.468e-100	341.0	COG0772@1|root,COG0772@2|Bacteria,4NDZD@976|Bacteroidetes,1INPB@117747|Sphingobacteriia	976|Bacteroidetes	D	Belongs to the SEDS family	rodA	-	-	ko:K05837	-	-	-	-	ko00000,ko03036	-	-	-	FTSW_RODA_SPOVE
BYD3_k127_4950116_8	1122179.KB890425_gene3435	3.624e-14	79.0	2EJD3@1|root,33D44@2|Bacteria,4NP3M@976|Bacteroidetes	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	SPOR
BYD3_k127_4950116_7	1267211.KI669560_gene2531	1.884e-50	189.0	COG0274@1|root,COG0274@2|Bacteria,4NGE3@976|Bacteroidetes,1IXCK@117747|Sphingobacteriia	976|Bacteroidetes	F	Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate	deoC	GO:0003674,GO:0003824,GO:0004139,GO:0005975,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009117,GO:0009166,GO:0009262,GO:0009264,GO:0009987,GO:0016052,GO:0016829,GO:0016830,GO:0016832,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0046434,GO:0046483,GO:0046700,GO:0055086,GO:0071704,GO:1901135,GO:1901136,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901575,GO:1901576	4.1.2.4	ko:K01619	ko00030,map00030	-	R01066	RC00436,RC00437	ko00000,ko00001,ko01000	-	-	-	DeoC
BYD3_k127_4950116_3	760192.Halhy_2962	8.596e-127	412.0	COG2171@1|root,COG2171@2|Bacteria,4NEWD@976|Bacteroidetes,1INN5@117747|Sphingobacteriia	976|Bacteroidetes	E	Belongs to the transferase hexapeptide repeat family	dapD	-	2.3.1.117	ko:K00674	ko00300,ko01100,ko01120,ko01230,map00300,map01100,map01120,map01230	M00016	R04365	RC00004,RC01136	ko00000,ko00001,ko00002,ko01000	-	-	-	Hexapep,Hexapep_2,THDPS_N_2
BYD3_k127_4950116_9	1122179.KB890414_gene1692	6.973e-07	59.0	COG3087@1|root,COG3087@2|Bacteria	2|Bacteria	D	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides	-	-	-	ko:K03749	-	-	-	-	ko00000	-	-	-	SPOR
BYD3_k127_4950116_6	1122915.AUGY01000038_gene1778	2.298e-58	210.0	COG2135@1|root,COG2135@2|Bacteria,1TRRV@1239|Firmicutes,4HDUN@91061|Bacilli,26T4Z@186822|Paenibacillaceae	91061|Bacilli	S	Belongs to the SOS response-associated peptidase family	-	-	-	-	-	-	-	-	-	-	-	-	SRAP
BYD3_k127_4950116_2	760192.Halhy_1990	1.156e-151	486.0	COG0216@1|root,COG0216@2|Bacteria,4NF72@976|Bacteroidetes,1IPKJ@117747|Sphingobacteriia	976|Bacteroidetes	J	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA	prfA	-	-	ko:K02835	-	-	-	-	ko00000,ko03012	-	-	-	PCRF,RF-1
BYD3_k127_4951470_3	1122176.KB903543_gene593	3.39e-127	410.0	COG0825@1|root,COG0825@2|Bacteria,4NEVU@976|Bacteroidetes,1IP0K@117747|Sphingobacteriia	976|Bacteroidetes	I	Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA	accA	-	2.1.3.15,6.4.1.2	ko:K01962	ko00061,ko00620,ko00640,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00061,map00620,map00640,map00720,map01100,map01110,map01120,map01130,map01200,map01212	M00082,M00376	R00742,R04386	RC00040,RC00253,RC00367	ko00000,ko00001,ko00002,ko01000	-	-	-	ACCA
BYD3_k127_4951470_5	760192.Halhy_2021	1.825e-84	288.0	COG1028@1|root,COG1028@2|Bacteria,4NHSE@976|Bacteroidetes	976|Bacteroidetes	IQ	PFAM Short-chain dehydrogenase reductase SDR	-	-	-	-	-	-	-	-	-	-	-	-	adh_short
BYD3_k127_4951470_4	1317122.ATO12_18215	6.594e-95	318.0	COG1028@1|root,COG1028@2|Bacteria,4NICN@976|Bacteroidetes,1HY8Z@117743|Flavobacteriia,2YIXZ@290174|Aquimarina	976|Bacteroidetes	IQ	NAD(P)H-binding	-	-	1.1.1.100	ko:K00059	ko00061,ko00333,ko00780,ko01040,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01040,map01100,map01130,map01212	M00083,M00572	R04533,R04534,R04536,R04543,R04566,R04953,R04964,R07759,R07763,R10116,R10120,R11671	RC00029,RC00117	ko00000,ko00001,ko00002,ko01000,ko01004	-	-	-	adh_short_C2
BYD3_k127_4951470_6	1415166.NONO_c62050	2.144e-39	151.0	COG0251@1|root,COG3971@1|root,COG0251@2|Bacteria,COG3971@2|Bacteria,2GM4Z@201174|Actinobacteria,4FV0W@85025|Nocardiaceae	201174|Actinobacteria	Q	4-oxalocrotonate decarboxylase	-	-	4.1.1.77	ko:K01617	ko00362,ko00621,ko00622,ko01100,ko01120,ko01220,map00362,map00621,map00622,map01100,map01120,map01220	M00569	R02602,R05374	RC00751,RC02672	ko00000,ko00001,ko00002,ko01000	-	-	-	FAA_hydrolase
BYD3_k127_4951470_2	1122176.KB903587_gene4462	6.144e-132	430.0	COG3483@1|root,COG3483@2|Bacteria,4NFG4@976|Bacteroidetes,1IPQV@117747|Sphingobacteriia	976|Bacteroidetes	E	Tryptophan 2,3-dioxygenase	kynA	-	1.13.11.11	ko:K00453	ko00380,ko01100,map00380,map01100	M00038	R00678	RC00356	ko00000,ko00001,ko00002,ko01000	-	-	-	Trp_dioxygenase
BYD3_k127_4951470_0	1313301.AUGC01000003_gene2146	1.187e-193	615.0	COG1012@1|root,COG1012@2|Bacteria,4NEB7@976|Bacteroidetes	976|Bacteroidetes	C	Belongs to the aldehyde dehydrogenase family	-	-	1.2.1.32,1.2.1.85	ko:K10217	ko00362,ko00380,ko00622,ko01100,ko01120,ko01220,map00362,map00380,map00622,map01100,map01120,map01220	M00038,M00569	R02762,R03889,R05353	RC00218,RC00254	ko00000,ko00001,ko00002,ko01000	-	-	-	Aldedh
BYD3_k127_4951470_1	246197.MXAN_0918	2.85e-144	463.0	COG2159@1|root,COG2159@2|Bacteria,1R5PG@1224|Proteobacteria,431I4@68525|delta/epsilon subdivisions,2WW88@28221|Deltaproteobacteria	28221|Deltaproteobacteria	S	Amidohydrolase	-	-	4.1.1.45	ko:K03392	ko00380,ko01100,map00380,map01100	M00038	R04323	RC00779	ko00000,ko00001,ko00002,ko01000	-	-	-	Amidohydro_2
BYD3_k127_4952654_0	760192.Halhy_1461	2.339e-125	411.0	COG0587@1|root,COG0587@2|Bacteria,4NFA0@976|Bacteroidetes,1IR52@117747|Sphingobacteriia	976|Bacteroidetes	L	DNA polymerase III alpha subunit	dnaE	-	2.7.7.7	ko:K02337	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	M00260	R00375,R00376,R00377,R00378	RC02795	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	-	-	-	DNA_pol3_alpha,HHH_6,PHP,RNase_T,tRNA_anti-codon
BYD3_k127_4952654_3	1121931.AUHG01000011_gene2408	1.178e-40	156.0	COG0526@1|root,COG0526@2|Bacteria,4NQ9U@976|Bacteroidetes,1I2Z8@117743|Flavobacteriia	976|Bacteroidetes	CO	Thioredoxin	-	-	-	-	-	-	-	-	-	-	-	-	AhpC-TSA,Thioredoxin,Thioredoxin_8
BYD3_k127_4952654_2	1296415.JACC01000009_gene2038	9.271e-71	244.0	COG1225@1|root,COG1225@2|Bacteria,4NMEK@976|Bacteroidetes,1HYRW@117743|Flavobacteriia,2YGT9@290174|Aquimarina	976|Bacteroidetes	O	Redoxin	-	-	-	-	-	-	-	-	-	-	-	-	AhpC-TSA
BYD3_k127_4952654_5	313606.M23134_06122	3.683e-13	70.0	COG4877@1|root,COG4877@2|Bacteria,4NXSU@976|Bacteroidetes,47S1G@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	Arc,RHH_5
BYD3_k127_4952654_1	1237149.C900_05303	7.923e-115	376.0	COG0330@1|root,COG0330@2|Bacteria,4NEBV@976|Bacteroidetes,47JW8@768503|Cytophagia	976|Bacteroidetes	O	membrane protease	-	-	-	-	-	-	-	-	-	-	-	-	Band_7
BYD3_k127_4973372_0	1189620.AJXL01000033_gene2869	2.342e-136	439.0	COG0053@1|root,COG0053@2|Bacteria,4NEID@976|Bacteroidetes,1HY4C@117743|Flavobacteriia,2NS9D@237|Flavobacterium	976|Bacteroidetes	P	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family	fieF	-	-	-	-	-	-	-	-	-	-	-	Cation_efflux,ZT_dimer
BYD3_k127_4973372_1	1123037.AUDE01000012_gene171	1.98e-77	281.0	COG4676@1|root,COG4676@2|Bacteria,4NISW@976|Bacteroidetes,1I0BF@117743|Flavobacteriia	976|Bacteroidetes	O	Peptidyl-prolyl cis-trans isomerase	-	-	-	-	-	-	-	-	-	-	-	-	UPF0560
BYD3_k127_4973372_2	745718.JADT01000004_gene1206	3.278e-42	166.0	COG0545@1|root,COG4676@1|root,COG0545@2|Bacteria,COG4676@2|Bacteria,4NISW@976|Bacteroidetes,1I0BF@117743|Flavobacteriia	976|Bacteroidetes	O	Peptidyl-prolyl cis-trans isomerase	-	-	-	-	-	-	-	-	-	-	-	-	UPF0560
BYD3_k127_4989257_0	880073.Calab_2890	1.087e-108	365.0	COG3616@1|root,COG3616@2|Bacteria,2NPWK@2323|unclassified Bacteria	2|Bacteria	E	Putative serine dehydratase domain	-	-	4.3.1.27	ko:K20757	-	-	-	-	ko00000,ko01000	-	-	-	Ala_racemase_N,D-ser_dehydrat
BYD3_k127_4989257_1	566466.NOR53_3292	1.092e-41	174.0	COG1226@1|root,COG1226@2|Bacteria,1R7UB@1224|Proteobacteria,1S0GD@1236|Gammaproteobacteria	1236|Gammaproteobacteria	P	Ryanodine receptor Ryr	-	-	-	-	-	-	-	-	-	-	-	-	RyR,TrkA_N
BYD3_k127_4989257_2	1223410.KN050846_gene2112	3.879e-30	138.0	COG2815@1|root,COG2815@2|Bacteria,4NXFG@976|Bacteroidetes,1I6HM@117743|Flavobacteriia	976|Bacteroidetes	S	TIR domain	-	-	2.7.11.1	ko:K12132	-	-	-	-	ko00000,ko01000,ko01001	-	-	-	TIR_2
BYD3_k127_4989257_3	247633.GP2143_09680	5.399e-11	76.0	COG1357@1|root,COG1357@2|Bacteria	2|Bacteria	S	protein homooligomerization	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_5021141_0	938709.AUSH02000016_gene708	1.012e-88	302.0	COG1131@1|root,COG1131@2|Bacteria,4NIVX@976|Bacteroidetes	976|Bacteroidetes	V	ABC transporter	-	-	-	ko:K01990	-	M00254	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	ABC_tran
BYD3_k127_5021141_2	760192.Halhy_5476	5.28e-53	199.0	2A3KA@1|root,30S3D@2|Bacteria,4PIYF@976|Bacteroidetes,1IXQP@117747|Sphingobacteriia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_5021141_1	1122176.KB903587_gene4465	9.435e-77	279.0	COG1520@1|root,COG3291@1|root,COG1520@2|Bacteria,COG3291@2|Bacteria,4P0B8@976|Bacteroidetes,1IVY1@117747|Sphingobacteriia	976|Bacteroidetes	M	C-terminal domain of CHU protein family	-	-	-	-	-	-	-	-	-	-	-	-	CHU_C,SprB
BYD3_k127_5022248_1	760192.Halhy_2775	7.959e-55	196.0	COG3495@1|root,COG3495@2|Bacteria,4NTUM@976|Bacteroidetes,1J0DJ@117747|Sphingobacteriia	976|Bacteroidetes	S	Protein conserved in bacteria	-	-	-	ko:K09950	-	-	-	-	ko00000	-	-	-	-
BYD3_k127_5022248_0	1122179.KB890433_gene4061	4.409e-94	326.0	COG2133@1|root,COG2133@2|Bacteria,4NF0B@976|Bacteroidetes	976|Bacteroidetes	G	glucose sorbosone	-	-	-	-	-	-	-	-	-	-	-	-	CBM_6,GSDH,PKD
BYD3_k127_5045010_0	1313421.JHBV01000038_gene2826	4.82e-137	447.0	COG0508@1|root,COG0508@2|Bacteria,4NFB9@976|Bacteroidetes,1IPXC@117747|Sphingobacteriia	976|Bacteroidetes	C	The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2)	pdhC	-	2.3.1.12	ko:K00627	ko00010,ko00020,ko00620,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00020,map00620,map01100,map01110,map01120,map01130,map01200	M00307	R00209,R02569	RC00004,RC02742,RC02857	br01601,ko00000,ko00001,ko00002,ko01000	-	-	-	2-oxoacid_dh,Biotin_lipoyl,E3_binding
BYD3_k127_5045010_2	984262.SGRA_2046	8.601e-110	377.0	COG2885@1|root,COG2885@2|Bacteria,4NIV8@976|Bacteroidetes,1IXGD@117747|Sphingobacteriia	976|Bacteroidetes	M	OmpA MotB domain protein	-	-	-	ko:K03286	-	-	-	-	ko00000,ko02000	1.B.6	-	-	OmpA
BYD3_k127_5045010_3	760192.Halhy_4801	4.472e-38	155.0	COG0010@1|root,COG0010@2|Bacteria,4NE5W@976|Bacteroidetes,1IQD9@117747|Sphingobacteriia	976|Bacteroidetes	E	Belongs to the arginase family	-	-	3.5.3.8	ko:K01479	ko00340,ko01100,map00340,map01100	M00045	R02285	RC00221,RC00681	ko00000,ko00001,ko00002,ko01000	-	-	-	Arginase
BYD3_k127_5045010_1	760192.Halhy_4800	2.448e-115	385.0	COG0770@1|root,COG0770@2|Bacteria,4NDWD@976|Bacteroidetes,1IQA5@117747|Sphingobacteriia	976|Bacteroidetes	M	Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein	murF	-	6.3.2.10	ko:K01929	ko00300,ko00550,ko01100,ko01502,map00300,map00550,map01100,map01502	-	R04573,R04617	RC00064,RC00141	ko00000,ko00001,ko01000,ko01011	-	-	-	Mur_ligase,Mur_ligase_C,Mur_ligase_M
BYD3_k127_5045908_1	688270.Celal_2879	3.843e-32	138.0	COG3595@1|root,COG3595@2|Bacteria,4NEUW@976|Bacteroidetes,1HYD6@117743|Flavobacteriia,1F85W@104264|Cellulophaga	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_5045908_3	1434325.AZQN01000003_gene2045	6.702e-08	61.0	2A95J@1|root,30YA2@2|Bacteria,4NP9E@976|Bacteroidetes,47PTP@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_5045908_0	760192.Halhy_3536	1.415e-51	189.0	COG1595@1|root,COG1595@2|Bacteria,4NMAK@976|Bacteroidetes,1ISGD@117747|Sphingobacteriia	976|Bacteroidetes	K	PFAM RNA polymerase sigma factor 70, region 4 type 2	-	-	-	ko:K03088	-	-	-	-	ko00000,ko03021	-	-	-	Sigma70_r2,Sigma70_r4_2
BYD3_k127_5045908_2	760192.Halhy_1777	6.879e-32	129.0	COG1765@1|root,COG1765@2|Bacteria,4NFWN@976|Bacteroidetes,1ITTE@117747|Sphingobacteriia	976|Bacteroidetes	O	redox protein regulator of disulfide bond formation	-	-	-	ko:K07397	-	-	-	-	ko00000	-	-	-	Fer4_19,OsmC
BYD3_k127_5064845_0	760192.Halhy_2376	1.012e-194	616.0	COG1228@1|root,COG1228@2|Bacteria,4NF27@976|Bacteroidetes,1IVYR@117747|Sphingobacteriia	976|Bacteroidetes	Q	Amidohydrolase family	-	-	-	-	-	-	-	-	-	-	-	-	Amidohydro_1,Amidohydro_3
BYD3_k127_5064845_1	1123234.AUKI01000011_gene1051	4.371e-98	341.0	COG1228@1|root,COG1228@2|Bacteria,4NF27@976|Bacteroidetes,1HX85@117743|Flavobacteriia	976|Bacteroidetes	Q	COG1228 Imidazolonepropionase and related	-	-	-	-	-	-	-	-	-	-	-	-	Amidohydro_1,Amidohydro_3
BYD3_k127_5066952_1	1122176.KB903546_gene1027	3.232e-102	365.0	COG0265@1|root,COG3291@1|root,COG0265@2|Bacteria,COG3291@2|Bacteria,4PKTY@976|Bacteroidetes	976|Bacteroidetes	O	ASPIC and UnbV	-	-	-	-	-	-	-	-	-	-	-	-	FG-GAP,MAM,UnbV_ASPIC,VCBS,fn3
BYD3_k127_5066952_3	1353276.JADR01000005_gene2519	8.544e-43	167.0	COG4122@1|root,COG4122@2|Bacteria,4NG1S@976|Bacteroidetes,1HX2G@117743|Flavobacteriia	976|Bacteroidetes	S	O-Methyltransferase	-	-	-	-	-	-	-	-	-	-	-	-	Methyltransf_24
BYD3_k127_5066952_2	1122176.KB903535_gene1991	4.054e-47	175.0	29DPA@1|root,300M4@2|Bacteria,4NP9B@976|Bacteroidetes	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_5066952_0	1313421.JHBV01000008_gene4323	1.073e-224	705.0	COG0022@1|root,COG1071@1|root,COG0022@2|Bacteria,COG1071@2|Bacteria,4NE71@976|Bacteroidetes,1IV4C@117747|Sphingobacteriia	976|Bacteroidetes	C	Pyruvate 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type	bfmBAB	-	1.2.4.4	ko:K11381	ko00280,ko00640,ko01100,ko01110,ko01130,map00280,map00640,map01100,map01110,map01130	M00036	R07599,R07600,R07601,R07602,R07603,R07604,R10996,R10997	RC00027,RC00627,RC02743,RC02883,RC02949,RC02953	br01601,ko00000,ko00001,ko00002,ko01000	-	-	-	E1_dh,Transket_pyr,Transketolase_C
BYD3_k127_507459_1	435591.BDI_1900	1.952e-110	374.0	COG0062@1|root,COG0063@1|root,COG0062@2|Bacteria,COG0063@2|Bacteria,4NG2F@976|Bacteroidetes,2FQ4K@200643|Bacteroidia,22W49@171551|Porphyromonadaceae	976|Bacteroidetes	H	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration	nnrD	-	4.2.1.136,5.1.99.6	ko:K17758,ko:K17759	-	-	-	-	ko00000,ko01000	-	-	-	Carb_kinase,YjeF_N
BYD3_k127_507459_2	1122176.KB903598_gene4613	1.165e-92	310.0	COG0846@1|root,COG0846@2|Bacteria,4NE9Q@976|Bacteroidetes,1INTC@117747|Sphingobacteriia	976|Bacteroidetes	K	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form	cobB	-	-	ko:K12410	-	-	-	-	ko00000,ko01000	-	-	-	SIR2
BYD3_k127_507459_0	760192.Halhy_2077	2.671e-285	899.0	COG4447@1|root,COG4447@2|Bacteria,4NESU@976|Bacteroidetes,1IVNR@117747|Sphingobacteriia	976|Bacteroidetes	S	Sortilin, neurotensin receptor 3,	-	-	-	-	-	-	-	-	-	-	-	-	Sortilin-Vps10
BYD3_k127_5082568_0	1121889.AUDM01000002_gene337	1.165e-71	276.0	COG5295@1|root,COG5295@2|Bacteria,4NJTK@976|Bacteroidetes,1HZNB@117743|Flavobacteriia,2NVE3@237|Flavobacterium	976|Bacteroidetes	UW	Chaperone of endosialidase	-	-	-	-	-	-	-	-	-	-	-	-	Peptidase_S74,YadA_head
BYD3_k127_5082568_4	96561.Dole_1790	1.146e-48	194.0	COG1319@1|root,COG1653@1|root,COG5492@1|root,COG1319@2|Bacteria,COG1653@2|Bacteria,COG5492@2|Bacteria,1N4S6@1224|Proteobacteria,43BRE@68525|delta/epsilon subdivisions,2X729@28221|Deltaproteobacteria,2MNRP@213118|Desulfobacterales	1224|Proteobacteria	G	Conserved repeat domain	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_5082568_3	760192.Halhy_5849	1.77e-51	197.0	COG0457@1|root,COG4585@1|root,COG0457@2|Bacteria,COG4585@2|Bacteria,4NI65@976|Bacteroidetes,1IRZC@117747|Sphingobacteriia	976|Bacteroidetes	T	Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor	-	-	-	-	-	-	-	-	-	-	-	-	HATPase_c,HisKA_3,TPR_12,TPR_8
BYD3_k127_5082568_5	421531.IX38_10055	1.143e-06	59.0	COG0457@1|root,COG2972@1|root,COG0457@2|Bacteria,COG2972@2|Bacteria,4NF45@976|Bacteroidetes,1HXAW@117743|Flavobacteriia,3ZUAD@59732|Chryseobacterium	976|Bacteroidetes	T	Histidine kinase	-	-	-	-	-	-	-	-	-	-	-	-	7TMR-DISM_7TM,His_kinase,TPR_10,TPR_12,TPR_2,TPR_7,TPR_8
BYD3_k127_5082568_2	1122176.KB903587_gene4371	1.423e-56	205.0	COG2197@1|root,COG2197@2|Bacteria,4NQNY@976|Bacteroidetes,1IY32@117747|Sphingobacteriia	976|Bacteroidetes	K	helix_turn_helix, Lux Regulon	-	-	-	-	-	-	-	-	-	-	-	-	GerE,Response_reg
BYD3_k127_5082568_1	760192.Halhy_4960	1.668e-67	233.0	COG3279@1|root,COG3279@2|Bacteria,4NIJQ@976|Bacteroidetes	976|Bacteroidetes	T	Response regulator of the LytR AlgR family	-	-	-	-	-	-	-	-	-	-	-	-	LytTR,Response_reg
BYD3_k127_5102110_5	984262.SGRA_1216	1.619e-43	168.0	COG0775@1|root,COG0775@2|Bacteria,4NQVQ@976|Bacteroidetes,1IT1C@117747|Sphingobacteriia	976|Bacteroidetes	F	Catalyzes the hydrolysis of futalosine (FL) to dehypoxanthine futalosine (DHFL) and hypoxanthine, a step in the biosynthesis of menaquinone (MK, vitamin K2)	mqnB	-	3.2.2.26	ko:K11783	ko00130,ko01110,map00130,map01110	-	R08587	RC00063,RC00318	ko00000,ko00001,ko01000	-	-	-	PNP_UDP_1
BYD3_k127_5102110_2	760192.Halhy_0277	1.803e-64	235.0	28HHD@1|root,2Z7T3@2|Bacteria,4NGWB@976|Bacteroidetes,1ISCP@117747|Sphingobacteriia	976|Bacteroidetes	S	Protein of unknown function (DUF3810)	-	-	-	-	-	-	-	-	-	-	-	-	DUF3810
BYD3_k127_5102110_4	1122179.KB890497_gene2804	2.094e-46	170.0	COG3118@1|root,COG3118@2|Bacteria,4NQ5B@976|Bacteroidetes,1ISZS@117747|Sphingobacteriia	976|Bacteroidetes	O	Belongs to the thioredoxin family	trxA	-	-	ko:K03671	ko04621,ko05418,map04621,map05418	-	-	-	ko00000,ko00001,ko03110	-	-	-	Thioredoxin
BYD3_k127_5102110_0	760192.Halhy_0279	6.532e-131	424.0	COG1721@1|root,COG1721@2|Bacteria,4NG0C@976|Bacteroidetes,1IRJS@117747|Sphingobacteriia	976|Bacteroidetes	S	protein (some members contain a von Willebrand factor type A (vWA) domain)	-	-	-	-	-	-	-	-	-	-	-	-	DUF58
BYD3_k127_5102110_1	1122179.KB890415_gene1961	7.135e-89	299.0	COG2326@1|root,COG2326@2|Bacteria,4NFJ5@976|Bacteroidetes,1IR78@117747|Sphingobacteriia	976|Bacteroidetes	S	Polyphosphate nucleotide phosphotransferase, PPK2 family	-	-	-	-	-	-	-	-	-	-	-	-	PPK2
BYD3_k127_5102110_3	760192.Halhy_5962	3.119e-61	223.0	COG0616@1|root,COG0616@2|Bacteria,4NES1@976|Bacteroidetes,1IP6H@117747|Sphingobacteriia	976|Bacteroidetes	OU	signal peptide peptidase SppA, 67K type	sppA	-	-	ko:K04773	-	-	-	-	ko00000,ko01000,ko01002	-	-	-	Peptidase_S49
BYD3_k127_5141785_1	886293.Sinac_0066	3.992e-39	158.0	COG3921@1|root,COG3921@2|Bacteria,2J1YT@203682|Planctomycetes	203682|Planctomycetes	S	D-alanyl-D-alanine carboxypeptidase	-	-	-	-	-	-	-	-	-	-	-	-	Peptidase_M15_4
BYD3_k127_5141785_0	1321779.HMPREF1984_00211	7.042e-47	177.0	COG1011@1|root,COG1011@2|Bacteria,379ZB@32066|Fusobacteria	32066|Fusobacteria	S	Psort location Cytoplasmic, score	-	-	3.8.1.2	ko:K01560,ko:K07025	ko00361,ko00625,ko01100,ko01120,map00361,map00625,map01100,map01120	-	R05287	RC00697	ko00000,ko00001,ko01000	-	-	-	HAD_2
BYD3_k127_5141785_2	471854.Dfer_3051	7.351e-34	135.0	COG2259@1|root,COG2259@2|Bacteria,4NSBJ@976|Bacteroidetes,47R97@768503|Cytophagia	976|Bacteroidetes	S	DoxX	-	-	-	ko:K15977	-	-	-	-	ko00000	-	-	-	DoxX
BYD3_k127_514586_1	153721.MYP_4450	1.804e-47	175.0	COG0149@1|root,COG0149@2|Bacteria,4NE2F@976|Bacteroidetes,47KW6@768503|Cytophagia	976|Bacteroidetes	G	Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P)	tpiA	GO:0003674,GO:0003824,GO:0004807,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006006,GO:0006066,GO:0006071,GO:0006081,GO:0006082,GO:0006090,GO:0006091,GO:0006094,GO:0006096,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0016051,GO:0016052,GO:0016053,GO:0016310,GO:0016853,GO:0016860,GO:0016861,GO:0017144,GO:0018130,GO:0019318,GO:0019319,GO:0019359,GO:0019362,GO:0019363,GO:0019400,GO:0019405,GO:0019438,GO:0019439,GO:0019563,GO:0019637,GO:0019682,GO:0019693,GO:0019751,GO:0019752,GO:0032787,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042866,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044262,GO:0044270,GO:0044271,GO:0044275,GO:0044281,GO:0044282,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046031,GO:0046034,GO:0046164,GO:0046166,GO:0046174,GO:0046184,GO:0046364,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046700,GO:0046939,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0090407,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1901615,GO:1901616	5.3.1.1	ko:K01803	ko00010,ko00051,ko00562,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00051,map00562,map00710,map01100,map01110,map01120,map01130,map01200,map01230	M00001,M00002,M00003	R01015	RC00423	ko00000,ko00001,ko00002,ko01000,ko04147	-	-	-	TIM
BYD3_k127_514586_0	1122176.KB903531_gene2778	1.404e-285	892.0	COG0855@1|root,COG0855@2|Bacteria,4NE3P@976|Bacteroidetes,1IPGC@117747|Sphingobacteriia	976|Bacteroidetes	P	Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)	ppk	-	2.7.4.1	ko:K00937	ko00190,ko03018,map00190,map03018	-	-	-	ko00000,ko00001,ko01000,ko03019	-	-	-	PP_kinase,PP_kinase_C,PP_kinase_N
BYD3_k127_5150052_5	1454007.JAUG01000029_gene3231	3.42e-13	71.0	COG2114@1|root,COG2114@2|Bacteria,4NG5A@976|Bacteroidetes,1IT6K@117747|Sphingobacteriia	976|Bacteroidetes	T	Adenylyl- / guanylyl cyclase, catalytic domain	-	-	4.6.1.1	ko:K01768	ko00230,ko02025,ko04113,ko04213,map00230,map02025,map04113,map04213	M00695	R00089,R00434	RC00295	ko00000,ko00001,ko00002,ko01000	-	-	-	Guanylate_cyc
BYD3_k127_5150052_4	1128427.KB904821_gene2444	1.327e-13	85.0	COG2931@1|root,COG2931@2|Bacteria,1G0ZC@1117|Cyanobacteria,1H8KD@1150|Oscillatoriales	1117|Cyanobacteria	Q	PFAM Hemolysin-type calcium-binding repeat (2 copies)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4114,He_PIG
BYD3_k127_5150052_0	1123508.JH636439_gene1132	3.531e-81	304.0	COG1520@1|root,COG2373@1|root,COG2931@1|root,COG3386@1|root,COG4932@1|root,COG1520@2|Bacteria,COG2373@2|Bacteria,COG2931@2|Bacteria,COG3386@2|Bacteria,COG4932@2|Bacteria,2J4W7@203682|Planctomycetes	2|Bacteria	G	Pkd domain containing protein	-	-	-	-	-	-	-	-	-	-	-	-	CHRD,CHU_C,DUF11,DUF4347,SdrD_B
BYD3_k127_5150052_3	357808.RoseRS_2802	2.083e-46	193.0	COG1520@1|root,COG1520@2|Bacteria,2G9GE@200795|Chloroflexi,3774I@32061|Chloroflexia	32061|Chloroflexia	S	amine dehydrogenase activity	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_5150052_2	1239962.C943_04282	3.745e-67	235.0	COG2197@1|root,COG2197@2|Bacteria,4NHTM@976|Bacteroidetes,47PWE@768503|Cytophagia	976|Bacteroidetes	KT	Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain	-	-	-	-	-	-	-	-	-	-	-	-	GerE,Response_reg
BYD3_k127_5150052_1	929713.NIASO_06975	1.065e-70	265.0	COG0457@1|root,COG4585@1|root,COG0457@2|Bacteria,COG4585@2|Bacteria,4NI1V@976|Bacteroidetes	976|Bacteroidetes	T	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase	-	-	-	-	-	-	-	-	-	-	-	-	HATPase_c,HisKA_3,TPR_12,TPR_8
BYD3_k127_5181933_1	1122179.KB890452_gene4653	1.629e-51	186.0	COG2197@1|root,COG2197@2|Bacteria,4NF5P@976|Bacteroidetes,1IT9D@117747|Sphingobacteriia	976|Bacteroidetes	T	helix_turn_helix, Lux Regulon	-	-	-	-	-	-	-	-	-	-	-	-	GerE,Response_reg
BYD3_k127_5181933_0	641526.ADIWIN_0759	9.544e-83	307.0	COG3292@1|root,COG4585@1|root,COG3292@2|Bacteria,COG4585@2|Bacteria,4NHSC@976|Bacteroidetes,1HXPR@117743|Flavobacteriia	976|Bacteroidetes	T	Histidine kinase	-	-	-	-	-	-	-	-	-	-	-	-	HATPase_c,HisKA_3,Reg_prop,SpoIIE,Y_Y_Y
BYD3_k127_5197079_10	1122176.KB903532_gene2468	9.703e-06	55.0	2DCR5@1|root,32U02@2|Bacteria,4NTKM@976|Bacteroidetes,1IUPP@117747|Sphingobacteriia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_5197079_2	1089547.KB913013_gene744	9.228e-90	314.0	COG3266@1|root,COG3266@2|Bacteria,4NQBS@976|Bacteroidetes,47QPM@768503|Cytophagia	976|Bacteroidetes	S	FG-GAP repeat	-	-	-	-	-	-	-	-	-	-	-	-	FG-GAP_2
BYD3_k127_5197079_7	1123248.KB893370_gene5032	1.908e-52	187.0	COG3795@1|root,COG3795@2|Bacteria,4NQPY@976|Bacteroidetes,1IYMH@117747|Sphingobacteriia	976|Bacteroidetes	S	YCII-related domain	-	-	-	-	-	-	-	-	-	-	-	-	YCII
BYD3_k127_5197079_0	1123248.KB893370_gene5031	1.479e-172	550.0	COG4941@1|root,COG4941@2|Bacteria,4NGCS@976|Bacteroidetes,1IRPG@117747|Sphingobacteriia	976|Bacteroidetes	K	PFAM RNA polymerase sigma-70 region 2	-	-	-	ko:K03088	-	-	-	-	ko00000,ko03021	-	-	-	Sigma70_r2,Sigma70_r4_2
BYD3_k127_5197079_1	1408813.AYMG01000023_gene1992	1.688e-146	470.0	COG4977@1|root,COG4977@2|Bacteria,4NGSR@976|Bacteroidetes,1IP57@117747|Sphingobacteriia	976|Bacteroidetes	K	Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain	-	-	-	-	-	-	-	-	-	-	-	-	DJ-1_PfpI,HTH_18
BYD3_k127_5197079_6	925409.KI911562_gene2401	9.997e-54	194.0	COG0262@1|root,COG0262@2|Bacteria,4NPJF@976|Bacteroidetes,1J056@117747|Sphingobacteriia	976|Bacteroidetes	H	RibD C-terminal domain	-	-	-	-	-	-	-	-	-	-	-	-	RibD_C
BYD3_k127_5197079_4	1121481.AUAS01000002_gene3324	1.119e-63	220.0	COG3865@1|root,COG3865@2|Bacteria,4NE70@976|Bacteroidetes,47QIX@768503|Cytophagia	976|Bacteroidetes	S	3-demethylubiquinone-9 3-methyltransferase	-	-	-	-	-	-	-	-	-	-	-	-	3-dmu-9_3-mt
BYD3_k127_5197079_8	760192.Halhy_0143	4.729e-46	169.0	COG2764@1|root,COG2764@2|Bacteria,4NSNJ@976|Bacteroidetes,1ITJD@117747|Sphingobacteriia	976|Bacteroidetes	S	3-demethylubiquinone-9 3-methyltransferase	-	-	-	ko:K04750	-	-	-	-	ko00000	-	-	-	3-dmu-9_3-mt
BYD3_k127_5197079_5	743722.Sph21_2577	7.047e-57	202.0	COG4430@1|root,COG4430@2|Bacteria,4NNT1@976|Bacteroidetes,1IXI0@117747|Sphingobacteriia	976|Bacteroidetes	S	Domain of unknown function (DUF1905)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1905,OmdA
BYD3_k127_5197079_3	1191523.MROS_0468	7.688e-86	298.0	COG0153@1|root,COG0153@2|Bacteria	2|Bacteria	G	galactokinase activity	galK	-	2.7.1.6	ko:K00849	ko00052,ko00520,ko01100,map00052,map00520,map01100	M00554,M00632	R01092	RC00002,RC00078	ko00000,ko00001,ko00002,ko01000,ko04147	-	-	-	GHMP_kinases_C,GHMP_kinases_N,GalKase_gal_bdg
BYD3_k127_5197079_9	1121104.AQXH01000002_gene672	1.487e-38	148.0	29AZZ@1|root,2ZXYX@2|Bacteria,4NP6M@976|Bacteroidetes,1ITA8@117747|Sphingobacteriia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_5201930_2	1123248.KB893385_gene4734	1.451e-58	216.0	COG3292@1|root,COG4585@1|root,COG3292@2|Bacteria,COG4585@2|Bacteria	2|Bacteria	T	Histidine kinase	-	-	-	-	-	-	-	-	-	-	-	-	HATPase_c,HisKA_3,Reg_prop,Y_Y_Y
BYD3_k127_5201930_0	1122605.KB893631_gene3965	1.279e-79	271.0	COG2197@1|root,COG2197@2|Bacteria,4NHTM@976|Bacteroidetes,1ITQW@117747|Sphingobacteriia	976|Bacteroidetes	T	COGs COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain	-	-	-	-	-	-	-	-	-	-	-	-	GerE,Response_reg
BYD3_k127_5201930_5	471854.Dfer_3346	4.152e-19	104.0	COG3209@1|root,COG5295@1|root,COG3209@2|Bacteria,COG5295@2|Bacteria,4PKW4@976|Bacteroidetes,47Y7S@768503|Cytophagia	976|Bacteroidetes	M	Chaperone of endosialidase	-	-	-	-	-	-	-	-	-	-	-	-	Peptidase_S74,YadA_head
BYD3_k127_5201930_4	1121889.AUDM01000002_gene448	5.292e-40	172.0	COG3210@1|root,COG4675@1|root,COG5295@1|root,COG3210@2|Bacteria,COG4675@2|Bacteria,COG5295@2|Bacteria,4NJTK@976|Bacteroidetes,1HZNB@117743|Flavobacteriia	976|Bacteroidetes	UW	surface antigen	-	-	-	-	-	-	-	-	-	-	-	-	Peptidase_S74,YadA_head
BYD3_k127_5201930_3	938709.AUSH02000020_gene1986	9.973e-48	198.0	COG3656@1|root,COG5295@1|root,COG3656@2|Bacteria,COG5295@2|Bacteria,4NHDQ@976|Bacteroidetes	976|Bacteroidetes	UW	fibronectin type III domain protein	-	-	-	ko:K21571	-	-	-	-	ko00000	-	-	-	-
BYD3_k127_5201930_1	1392488.JHZY01000002_gene143	2.4e-76	259.0	COG0492@1|root,COG0492@2|Bacteria,4NDVS@976|Bacteroidetes,1HXB3@117743|Flavobacteriia,2XITT@283735|Leeuwenhoekiella	976|Bacteroidetes	O	Pyridine nucleotide-disulphide oxidoreductase	ypdA	-	1.8.1.9	ko:K00384	ko00450,map00450	-	R02016,R03596,R09372	RC00013,RC02518,RC02873	ko00000,ko00001,ko01000	-	-	-	Pyr_redox_3
BYD3_k127_523723_2	1122176.KB903531_gene2840	6.712e-22	111.0	COG0384@1|root,COG0384@2|Bacteria	2|Bacteria	S	isomerase activity	-	-	-	-	-	-	-	-	-	-	-	-	PhzC-PhzF
BYD3_k127_523723_0	1121896.JMLU01000002_gene422	2.164e-253	789.0	COG4799@1|root,COG4799@2|Bacteria,4NEMJ@976|Bacteroidetes,1HYE9@117743|Flavobacteriia,2NSUC@237|Flavobacterium	976|Bacteroidetes	I	Carboxyl transferase domain	pccB	-	2.1.3.15,6.4.1.3	ko:K01966	ko00280,ko00630,ko00640,ko01100,ko01120,ko01130,ko01200,map00280,map00630,map00640,map01100,map01120,map01130,map01200	M00373,M00741	R01859	RC00097,RC00609	ko00000,ko00001,ko00002,ko01000	-	-	-	Carboxyl_trans
BYD3_k127_523723_1	1450525.JATV01000008_gene509	1.005e-149	483.0	COG0436@1|root,COG0436@2|Bacteria,4NENS@976|Bacteroidetes,1HYA7@117743|Flavobacteriia,2NSGC@237|Flavobacterium	976|Bacteroidetes	E	Aminotransferase	aspC	-	2.6.1.1	ko:K00812	ko00220,ko00250,ko00270,ko00330,ko00350,ko00360,ko00400,ko00401,ko00950,ko00960,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map00250,map00270,map00330,map00350,map00360,map00400,map00401,map00950,map00960,map01100,map01110,map01130,map01210,map01230	-	R00355,R00694,R00734,R00896,R02433,R02619,R05052	RC00006	ko00000,ko00001,ko01000,ko01007	-	-	-	Aminotran_1_2
BYD3_k127_5239757_6	1122179.KB890497_gene2784	3.577e-19	91.0	COG1862@1|root,COG1862@2|Bacteria,4NUT4@976|Bacteroidetes,1IZTG@117747|Sphingobacteriia	976|Bacteroidetes	U	Preprotein translocase subunit	yajC	-	-	ko:K03210	ko02024,ko03060,ko03070,map02024,map03060,map03070	M00335	-	-	ko00000,ko00001,ko00002,ko02044	3.A.5.1,3.A.5.2	-	-	YajC
BYD3_k127_5239757_5	1122179.KB890497_gene2783	9.676e-27	115.0	COG2885@1|root,COG2885@2|Bacteria,4NP5H@976|Bacteroidetes,1ITIS@117747|Sphingobacteriia	976|Bacteroidetes	M	Protein of unknown function (DUF1573)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1573
BYD3_k127_5239757_4	886379.AEWI01000007_gene812	3.308e-33	135.0	COG0703@1|root,COG0703@2|Bacteria,4NQ73@976|Bacteroidetes,2FM3K@200643|Bacteroidia,3XK92@558415|Marinilabiliaceae	976|Bacteroidetes	E	Shikimate kinase	aroK	GO:0000287,GO:0003674,GO:0003824,GO:0004765,GO:0005488,GO:0006082,GO:0006520,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009987,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019438,GO:0019632,GO:0019752,GO:0032787,GO:0043167,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046872,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901615	2.7.1.71	ko:K00891	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	M00022	R02412	RC00002,RC00078	ko00000,ko00001,ko00002,ko01000	-	-	-	SKI
BYD3_k127_5239757_2	760192.Halhy_5883	8.505e-115	387.0	COG1404@1|root,COG1404@2|Bacteria,4NSXZ@976|Bacteroidetes	976|Bacteroidetes	O	Subtilase family	-	-	3.4.21.66	ko:K08651	-	-	-	-	ko00000,ko01000,ko01002,ko03110	-	-	-	Peptidase_S8
BYD3_k127_5239757_1	760192.Halhy_5882	1.717e-153	489.0	COG0492@1|root,COG0492@2|Bacteria,4NEVX@976|Bacteroidetes,1IQ1P@117747|Sphingobacteriia	976|Bacteroidetes	C	Thioredoxin reductase	trxB	-	1.8.1.9	ko:K00384	ko00450,map00450	-	R02016,R03596,R09372	RC00013,RC02518,RC02873	ko00000,ko00001,ko01000	-	-	-	Pyr_redox_2
BYD3_k127_5239757_0	1122176.KB903619_gene5381	1.216e-177	566.0	COG0191@1|root,COG0191@2|Bacteria,4NF5C@976|Bacteroidetes,1IPX5@117747|Sphingobacteriia	976|Bacteroidetes	G	Fructose-bisphosphate aldolase	fbaA	-	4.1.2.13	ko:K01624	ko00010,ko00030,ko00051,ko00680,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00030,map00051,map00680,map00710,map01100,map01110,map01120,map01130,map01200,map01230	M00001,M00003,M00165,M00167,M00344,M00345	R01068,R01070,R01829,R02568	RC00438,RC00439,RC00603,RC00604	ko00000,ko00001,ko00002,ko01000	-	-	-	F_bP_aldolase
BYD3_k127_5239757_3	1122176.KB903576_gene4969	1.003e-33	135.0	2E562@1|root,32ZYV@2|Bacteria,4NVMY@976|Bacteroidetes	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_5269395_4	1121481.AUAS01000015_gene2207	1.784e-12	69.0	COG0737@1|root,COG0737@2|Bacteria,4NESM@976|Bacteroidetes,47JR3@768503|Cytophagia	976|Bacteroidetes	F	Belongs to the 5'-nucleotidase family	-	-	3.1.3.5	ko:K01081	ko00230,ko00240,ko00760,ko01100,ko01110,map00230,map00240,map00760,map01100,map01110	-	R00183,R00511,R00963,R01126,R01227,R01569,R01664,R01968,R02088,R02102,R02323,R02719,R03346	RC00017	ko00000,ko00001,ko01000	-	-	-	Metallophos
BYD3_k127_5269395_1	1122176.KB903587_gene4377	1.389e-52	194.0	COG0737@1|root,COG0737@2|Bacteria,4NR6D@976|Bacteroidetes,1ITBW@117747|Sphingobacteriia	976|Bacteroidetes	F	5'-nucleotidase	ushA	-	3.1.3.5	ko:K01081	ko00230,ko00240,ko00760,ko01100,ko01110,map00230,map00240,map00760,map01100,map01110	-	R00183,R00511,R00963,R01126,R01227,R01569,R01664,R01968,R02088,R02102,R02323,R02719,R03346	RC00017	ko00000,ko00001,ko01000	-	-	-	5_nucleotid_C
BYD3_k127_5269395_3	1189620.AJXL01000059_gene333	2.826e-22	103.0	28NWP@1|root,2ZBUH@2|Bacteria,4NNPT@976|Bacteroidetes,1I253@117743|Flavobacteriia,2NVV8@237|Flavobacterium	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_5269395_2	760192.Halhy_6023	4.413e-52	185.0	COG0316@1|root,COG0316@2|Bacteria,4NS6K@976|Bacteroidetes,1ISU6@117747|Sphingobacteriia	976|Bacteroidetes	S	Belongs to the HesB IscA family	iscA	-	-	ko:K13628	-	-	-	-	ko00000,ko03016	-	-	-	Fe-S_biosyn
BYD3_k127_5269395_0	880071.Fleli_2408	3.171e-99	329.0	COG0612@1|root,COG0612@2|Bacteria,4NEDZ@976|Bacteroidetes,47M1B@768503|Cytophagia	976|Bacteroidetes	S	PFAM Peptidase M16 inactive domain	-	-	-	-	-	-	-	-	-	-	-	-	Peptidase_M16,Peptidase_M16_C
BYD3_k127_527143_4	1313421.JHBV01000033_gene2429	1.143e-16	79.0	COG0537@1|root,COG0537@2|Bacteria,4NQ4X@976|Bacteroidetes,1ISWH@117747|Sphingobacteriia	976|Bacteroidetes	FG	COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family	hinT	-	-	ko:K02503	-	-	-	-	ko00000,ko04147	-	-	-	HIT
BYD3_k127_527143_3	1122176.KB903565_gene3247	7.457e-59	211.0	COG0782@1|root,COG0782@2|Bacteria,4NNH6@976|Bacteroidetes,1IS01@117747|Sphingobacteriia	976|Bacteroidetes	K	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides	greA	-	-	ko:K03624	-	-	-	-	ko00000,ko03021	-	-	-	GreA_GreB,GreA_GreB_N
BYD3_k127_527143_2	760192.Halhy_4035	1.233e-117	388.0	COG2067@1|root,COG2067@2|Bacteria,4NWE8@976|Bacteroidetes,1IYUI@117747|Sphingobacteriia	976|Bacteroidetes	I	long-chain fatty acid transport protein	-	-	-	-	-	-	-	-	-	-	-	-	PorP_SprF
BYD3_k127_527143_0	760192.Halhy_4034	0.0	1308.0	2E09V@1|root,32VXB@2|Bacteria,4NY12@976|Bacteroidetes,1J03H@117747|Sphingobacteriia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_527143_1	1122176.KB903565_gene3244	0.0	1037.0	COG1629@1|root,COG1629@2|Bacteria,4PPDE@976|Bacteroidetes,1IYC1@117747|Sphingobacteriia	976|Bacteroidetes	P	Carboxypeptidase regulatory-like domain	-	-	-	-	-	-	-	-	-	-	-	-	CarbopepD_reg_2,CarboxypepD_reg,Plug,TonB_dep_Rec
BYD3_k127_5276874_0	760192.Halhy_0204	1.582e-122	419.0	COG2373@1|root,COG2373@2|Bacteria,4NEW9@976|Bacteroidetes,1INMI@117747|Sphingobacteriia	976|Bacteroidetes	S	alpha-2-macroglobulin domain protein	-	-	-	ko:K06894	-	-	-	-	ko00000	-	-	-	A2M,A2M_N,A2M_N_2,MG1,Thiol-ester_cl
BYD3_k127_5276874_1	1122176.KB903565_gene3290	3.408e-42	161.0	COG0508@1|root,COG0508@2|Bacteria,4NED0@976|Bacteroidetes,1IP3U@117747|Sphingobacteriia	976|Bacteroidetes	C	Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex	pdhC	-	2.3.1.61	ko:K00658	ko00020,ko00310,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00310,map01100,map01110,map01120,map01130,map01200	M00009,M00011,M00032	R02570,R02571,R08549	RC00004,RC02727,RC02833	br01601,ko00000,ko00001,ko00002,ko01000	-	-	-	2-oxoacid_dh,Biotin_lipoyl,E3_binding
BYD3_k127_5278957_4	1123248.KB893337_gene2561	1.119e-12	81.0	COG3210@1|root,COG4932@1|root,COG3210@2|Bacteria,COG4932@2|Bacteria	2|Bacteria	M	domain protein	-	-	-	-	-	-	-	-	-	-	-	-	Beta_helix,Big_2,Calx-beta,Cna_B,Collagen_bind,Glug,Gram_pos_anchor,He_PIG,PATR,SLH,VWA_2,YSIRK_signal
BYD3_k127_5278957_1	1453505.JASY01000035_gene3835	1.26e-53	210.0	COG1345@1|root,COG5184@1|root,COG1345@2|Bacteria,COG5184@2|Bacteria,4NFVP@976|Bacteroidetes,1HY1K@117743|Flavobacteriia,2NSFX@237|Flavobacterium	976|Bacteroidetes	N	PFAM SMP-30 Gluconolaconase	-	-	-	-	-	-	-	-	-	-	-	-	Laminin_G_3
BYD3_k127_5278957_0	760192.Halhy_2762	7.614e-66	236.0	COG4319@1|root,COG4319@2|Bacteria,4PP1J@976|Bacteroidetes,1J0X2@117747|Sphingobacteriia	976|Bacteroidetes	S	SnoaL-like domain	-	-	-	-	-	-	-	-	-	-	-	-	SnoaL_3
BYD3_k127_5278957_3	760192.Halhy_2563	5.742e-14	81.0	COG3228@1|root,COG3228@2|Bacteria	2|Bacteria	S	metallopeptidase activity	-	-	-	ko:K09933	-	-	-	-	ko00000,ko01002	-	-	-	Peptidase_M90
BYD3_k127_5278957_6	1123058.KB894251_gene2394	3.601e-10	61.0	2DR32@1|root,339YJ@2|Bacteria,4NYM3@976|Bacteroidetes,1I6CH@117743|Flavobacteriia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_5278957_2	1122176.KB903541_gene255	5.617e-40	168.0	COG2911@1|root,COG3227@1|root,COG3291@1|root,COG4935@1|root,COG2911@2|Bacteria,COG3227@2|Bacteria,COG3291@2|Bacteria,COG4935@2|Bacteria	2|Bacteria	O	Belongs to the peptidase S8 family	-	-	3.2.1.14	ko:K01183	ko00520,ko01100,map00520,map01100	-	R01206,R02334	RC00467	ko00000,ko00001,ko01000	-	GH18	-	CHU_C,PKD,P_proprotein,Peptidase_M43,SprB
BYD3_k127_5278957_5	1122179.KB890436_gene1412	7.31e-11	75.0	COG1361@1|root,COG3055@1|root,COG3291@1|root,COG5492@1|root,COG1361@2|Bacteria,COG3055@2|Bacteria,COG3291@2|Bacteria,COG5492@2|Bacteria,4NEAB@976|Bacteroidetes,1IWYC@117747|Sphingobacteriia	976|Bacteroidetes	N	Domain of unknown function (DUF5060)	-	-	-	-	-	-	-	-	-	-	-	-	CBM_6,Collagen_bind_2,DUF5060
BYD3_k127_5290441_3	760192.Halhy_1273	9.087e-75	256.0	COG2518@1|root,COG2518@2|Bacteria,4NFCU@976|Bacteroidetes,1IQ1X@117747|Sphingobacteriia	976|Bacteroidetes	O	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins	pcm	-	2.1.1.77	ko:K00573	-	-	-	-	ko00000,ko01000	-	-	-	PCMT
BYD3_k127_5290441_8	760192.Halhy_4461	2.655e-44	167.0	2EV05@1|root,33NFB@2|Bacteria,4NXZZ@976|Bacteroidetes,1IZZX@117747|Sphingobacteriia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_5290441_6	1122179.KB890414_gene1740	9.688e-58	204.0	COG0590@1|root,COG0590@2|Bacteria,4NNJ2@976|Bacteroidetes,1ISDN@117747|Sphingobacteriia	976|Bacteroidetes	FJ	Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2)	tadA	-	3.5.4.33	ko:K11991	-	-	R10223	RC00477	ko00000,ko01000,ko03016	-	-	-	MafB19-deam,dCMP_cyt_deam_1
BYD3_k127_5290441_0	760192.Halhy_1322	3.666e-218	687.0	COG0516@1|root,COG0517@1|root,COG0516@2|Bacteria,COG0517@2|Bacteria,4NDXQ@976|Bacteroidetes,1IPBW@117747|Sphingobacteriia	976|Bacteroidetes	F	Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth	guaB	-	1.1.1.205	ko:K00088	ko00230,ko00983,ko01100,ko01110,map00230,map00983,map01100,map01110	M00050	R01130,R08240	RC00143,RC02207	ko00000,ko00001,ko00002,ko01000,ko04147	-	-	-	CBS,IMPDH
BYD3_k127_5290441_5	421531.IX38_18465	4.659e-61	217.0	COG2094@1|root,COG2094@2|Bacteria,4NP22@976|Bacteroidetes,1I1TP@117743|Flavobacteriia,3ZQNN@59732|Chryseobacterium	976|Bacteroidetes	L	Belongs to the DNA glycosylase MPG family	mpg	-	3.2.2.21	ko:K03652	ko03410,map03410	-	-	-	ko00000,ko00001,ko01000,ko03400	-	-	-	Pur_DNA_glyco
BYD3_k127_5290441_7	761193.Runsl_2509	8.551e-50	184.0	COG1943@1|root,COG1943@2|Bacteria,4NPUC@976|Bacteroidetes,47Q09@768503|Cytophagia	976|Bacteroidetes	L	Transposase IS200 like	-	-	-	-	-	-	-	-	-	-	-	-	Y1_Tnp
BYD3_k127_5290441_2	1122179.KB890449_gene145	8.467e-84	294.0	28HE2@1|root,2Z7QJ@2|Bacteria,4NFBA@976|Bacteroidetes,1INW8@117747|Sphingobacteriia	976|Bacteroidetes	S	Domain of unknown function (DUF5103)	-	-	-	-	-	-	-	-	-	-	-	-	DUF5103
BYD3_k127_5290441_4	1123057.P872_01365	3.991e-61	230.0	COG1538@1|root,COG1538@2|Bacteria,4NEEN@976|Bacteroidetes,47M95@768503|Cytophagia	976|Bacteroidetes	MU	PFAM Outer membrane efflux protein	-	-	-	ko:K12340	ko01501,ko01503,ko02020,ko03070,ko04626,ko05133,map01501,map01503,map02020,map03070,map04626,map05133	M00325,M00326,M00339,M00571,M00575,M00646,M00647,M00696,M00697,M00709,M00720,M00821	-	-	ko00000,ko00001,ko00002,ko01504,ko02000,ko02044	1.B.17,2.A.6.2	-	-	OEP
BYD3_k127_5290441_1	1122176.KB903532_gene2605	2.102e-131	434.0	COG0845@1|root,COG0845@2|Bacteria,4NFT4@976|Bacteroidetes,1IRGW@117747|Sphingobacteriia	976|Bacteroidetes	M	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family	-	-	-	ko:K02005	-	-	-	-	ko00000	-	-	-	Biotin_lipoyl_2,HlyD_D23,OEP
BYD3_k127_5290441_10	1121904.ARBP01000031_gene546	3.616e-06	57.0	COG5343@1|root,COG5343@2|Bacteria,4NI2H@976|Bacteroidetes,47M55@768503|Cytophagia	976|Bacteroidetes	S	PFAM Anti-sigma-K factor RskA	-	-	-	-	-	-	-	-	-	-	-	-	RskA
BYD3_k127_5290441_9	1122176.KB903540_gene101	1.775e-28	121.0	COG0188@1|root,COG0188@2|Bacteria,4NERI@976|Bacteroidetes,1IQ9E@117747|Sphingobacteriia	976|Bacteroidetes	L	COG0188 Type IIA topoisomerase (DNA gyrase topo II topoisomerase IV) A subunit	parC	-	-	ko:K02621	-	-	-	-	ko00000,ko01000,ko02048,ko03032,ko03036	-	-	-	DNA_topoisoIV
BYD3_k127_5295421_1	1122176.KB903554_gene3885	1.157e-83	292.0	COG0860@1|root,COG0860@2|Bacteria,4NGKC@976|Bacteroidetes,1ISH9@117747|Sphingobacteriia	976|Bacteroidetes	M	Cell wall hydrolase autolysin	amiA	-	3.5.1.28	ko:K01448	ko01503,map01503	M00727	R04112	RC00064,RC00141	ko00000,ko00001,ko00002,ko01000,ko01011,ko03036	-	-	-	Amidase_3
BYD3_k127_5295421_0	1122176.KB903554_gene3884	1.41e-173	572.0	COG1452@1|root,COG1452@2|Bacteria,4NFWD@976|Bacteroidetes,1IQE0@117747|Sphingobacteriia	976|Bacteroidetes	M	Organic solvent tolerance protein OstA	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_5296047_4	760192.Halhy_4727	8.6e-10	66.0	COG0793@1|root,COG0793@2|Bacteria,4NEGV@976|Bacteroidetes,1IP8V@117747|Sphingobacteriia	976|Bacteroidetes	M	Belongs to the peptidase S41A family	ctp	-	3.4.21.102	ko:K03797	-	-	-	-	ko00000,ko01000,ko01002	-	-	-	PDZ_2,Peptidase_S41
BYD3_k127_5296047_1	1122621.ATZA01000004_gene1194	3.704e-47	176.0	COG0009@1|root,COG0009@2|Bacteria,4NM43@976|Bacteroidetes,1IRXH@117747|Sphingobacteriia	976|Bacteroidetes	J	Belongs to the SUA5 family	rimN	-	2.7.7.87	ko:K07566	-	-	R10463	RC00745	ko00000,ko01000,ko03009,ko03016	-	-	-	Sua5_yciO_yrdC
BYD3_k127_5296047_0	1122176.KB903531_gene3076	2.906e-232	742.0	COG3291@1|root,COG3291@2|Bacteria,4NICC@976|Bacteroidetes,1IXKI@117747|Sphingobacteriia	976|Bacteroidetes	S	PKD domain containing protein	-	-	-	-	-	-	-	-	-	-	-	-	CHU_C,PKD
BYD3_k127_5296047_2	760192.Halhy_4731	3.135e-44	164.0	COG0335@1|root,COG0335@2|Bacteria,4NNPW@976|Bacteroidetes,1ISQ9@117747|Sphingobacteriia	976|Bacteroidetes	J	This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site	rplS	GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904	-	ko:K02884	ko03010,map03010	M00178	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_L19
BYD3_k127_5296047_3	743525.TSC_c02260	8.457e-12	69.0	COG4221@1|root,COG4221@2|Bacteria,1WJC2@1297|Deinococcus-Thermus	1297|Deinococcus-Thermus	S	KR domain	-	-	-	-	-	-	-	-	-	-	-	-	adh_short
BYD3_k127_5323075_1	1122176.KB903538_gene1504	2.214e-98	341.0	COG0457@1|root,COG2885@1|root,COG0457@2|Bacteria,COG2885@2|Bacteria,4NE6G@976|Bacteroidetes,1IPAI@117747|Sphingobacteriia	976|Bacteroidetes	M	Belongs to the ompA family	-	-	-	-	-	-	-	-	-	-	-	-	OmpA,PD40
BYD3_k127_5323075_0	1122176.KB903538_gene1503	1.284e-144	469.0	COG0341@1|root,COG0342@1|root,COG0341@2|Bacteria,COG0342@2|Bacteria,4NE1X@976|Bacteroidetes,1IP7W@117747|Sphingobacteriia	976|Bacteroidetes	U	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA	secD	-	-	ko:K03072,ko:K12257	ko02024,ko03060,ko03070,map02024,map03060,map03070	M00335	-	-	ko00000,ko00001,ko00002,ko02044	2.A.6.4,3.A.5.2,3.A.5.7	-	-	SecD_SecF,Sec_GG
BYD3_k127_5350504_0	926556.Echvi_3004	2.73e-86	295.0	COG4667@1|root,COG4667@2|Bacteria,4NF0K@976|Bacteroidetes,47YD0@768503|Cytophagia	976|Bacteroidetes	S	Patatin-like phospholipase	-	-	-	-	-	-	-	-	-	-	-	-	Patatin
BYD3_k127_5350504_1	1042376.AFPK01000042_gene1719	1.448e-45	175.0	COG2203@1|root,COG2203@2|Bacteria,4NE84@976|Bacteroidetes,1HXM4@117743|Flavobacteriia,406WZ@61432|unclassified Flavobacteriaceae	976|Bacteroidetes	T	Gaf domain	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_5431918_1	1122176.KB903531_gene2945	2.031e-15	81.0	COG1073@1|root,COG1073@2|Bacteria,4NMVZ@976|Bacteroidetes	976|Bacteroidetes	S	alpha beta	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_5431918_2	620914.JH621258_gene1031	3.92e-05	53.0	COG3047@1|root,COG3047@2|Bacteria	2|Bacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	DUF3943,OMP_b-brl
BYD3_k127_5431918_0	313606.M23134_03137	1.373e-68	244.0	COG3000@1|root,COG3000@2|Bacteria,4NI60@976|Bacteroidetes,47N8J@768503|Cytophagia	976|Bacteroidetes	I	Fatty acid hydroxylase superfamily	-	-	-	-	-	-	-	-	-	-	-	-	FA_hydroxylase
BYD3_k127_5443280_11	485918.Cpin_2207	3.473e-11	63.0	COG3829@1|root,COG4565@1|root,COG3829@2|Bacteria,COG4565@2|Bacteria,4PM5Y@976|Bacteroidetes	976|Bacteroidetes	KT	PFAM sigma-54 factor interaction domain-containing protein	-	-	-	-	-	-	-	-	-	-	-	-	HTH_8,PAS_9,Response_reg,Sigma54_activat,cNMP_binding
BYD3_k127_5443280_1	1122176.KB903598_gene4712	6.308e-119	405.0	COG2866@1|root,COG2866@2|Bacteria	2|Bacteria	E	metallocarboxypeptidase activity	-	-	-	-	-	-	-	-	-	-	-	-	CHU_C,CW_binding_1,HYR
BYD3_k127_5443280_0	411154.GFO_0031	0.0	1094.0	COG3250@1|root,COG3250@2|Bacteria,4NEWN@976|Bacteroidetes,1HXYF@117743|Flavobacteriia	976|Bacteroidetes	G	Belongs to the glycosyl hydrolase 2 family	-	-	3.2.1.23	ko:K01190	ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100	-	R01105,R01678,R03355,R04783,R06114	RC00049,RC00452	ko00000,ko00001,ko01000	-	-	-	DUF4982,Glyco_hydro_2,Glyco_hydro_2_C,Glyco_hydro_2_N
BYD3_k127_5443280_5	113355.CM001775_gene84	4.144e-50	181.0	COG0614@1|root,COG0614@2|Bacteria,1G79B@1117|Cyanobacteria	1117|Cyanobacteria	P	PD-(D/E)XK nuclease superfamily	-	-	-	-	-	-	-	-	-	-	-	-	PDDEXK_3
BYD3_k127_5443280_2	1189612.A33Q_1390	1.506e-93	313.0	COG4221@1|root,COG4221@2|Bacteria,4NFSY@976|Bacteroidetes,47KFB@768503|Cytophagia	976|Bacteroidetes	S	Belongs to the short-chain dehydrogenases reductases (SDR) family	-	-	-	-	-	-	-	-	-	-	-	-	adh_short
BYD3_k127_5443280_4	1123234.AUKI01000020_gene664	3.188e-67	239.0	COG3832@1|root,COG3832@2|Bacteria,4NQ4A@976|Bacteroidetes,1I391@117743|Flavobacteriia	976|Bacteroidetes	S	Activator of Hsp90 ATPase	-	-	-	-	-	-	-	-	-	-	-	-	AHSA1
BYD3_k127_5443280_9	1150600.ADIARSV_1523	1.331e-23	117.0	2C5U1@1|root,2Z80K@2|Bacteria,4NG4G@976|Bacteroidetes,1IQ1S@117747|Sphingobacteriia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_5443280_7	1121012.AUKX01000032_gene703	5.698e-33	136.0	COG2197@1|root,COG2197@2|Bacteria,4NQE7@976|Bacteroidetes,1HYWI@117743|Flavobacteriia,23I7B@178469|Arenibacter	976|Bacteroidetes	KT	helix_turn_helix, Lux Regulon	-	-	-	-	-	-	-	-	-	-	-	-	GerE,Response_reg
BYD3_k127_5443280_3	1406840.Q763_14720	1.106e-82	309.0	COG0642@1|root,COG3292@1|root,COG2205@2|Bacteria,COG3292@2|Bacteria,4NK65@976|Bacteroidetes,1I8J4@117743|Flavobacteriia,2NU45@237|Flavobacterium	976|Bacteroidetes	T	His Kinase A (phosphoacceptor) domain	-	-	-	-	-	-	-	-	-	-	-	-	HATPase_c,HisKA,Reg_prop
BYD3_k127_5443280_6	866536.Belba_1264	1.769e-48	181.0	COG2836@1|root,COG2836@2|Bacteria,4PP5N@976|Bacteroidetes	976|Bacteroidetes	S	Biogenesis protein	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_5443280_10	1121904.ARBP01000009_gene4209	8.165e-17	85.0	2DZFE@1|root,32V9B@2|Bacteria	2|Bacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_5443280_8	1237149.C900_04078	3.595e-24	103.0	2C87P@1|root,32H7J@2|Bacteria,4NS7S@976|Bacteroidetes,47R39@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	DoxX_2
BYD3_k127_547240_0	1122179.KB890413_gene4767	1.001e-224	716.0	COG0370@1|root,COG0370@2|Bacteria,4NEII@976|Bacteroidetes,1IPAK@117747|Sphingobacteriia	976|Bacteroidetes	P	transporter of a GTP-driven Fe(2 ) uptake system	feoB	-	-	ko:K04759	-	-	-	-	ko00000,ko02000	9.A.8.1	-	-	FeoA,FeoB_C,FeoB_N,Gate
BYD3_k127_547240_7	1313301.AUGC01000003_gene1927	0.0002075	48.0	COG1918@1|root,COG1918@2|Bacteria	2|Bacteria	P	iron ion homeostasis	feoA	-	-	ko:K04758	-	-	-	-	ko00000,ko02000	-	-	-	FeoA
BYD3_k127_547240_3	866536.Belba_0832	6.269e-58	207.0	COG2370@1|root,COG2370@2|Bacteria,4NMRP@976|Bacteroidetes,47MSF@768503|Cytophagia	976|Bacteroidetes	O	HupE / UreJ protein	-	-	-	-	-	-	-	-	-	-	-	-	HupE_UreJ_2
BYD3_k127_547240_5	1121904.ARBP01000012_gene1316	4.146e-09	64.0	2AE6H@1|root,3140B@2|Bacteria,4NSDV@976|Bacteroidetes,47RV6@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_547240_1	1122176.KB903609_gene5274	2.027e-210	666.0	COG0433@1|root,COG0433@2|Bacteria,4NF3P@976|Bacteroidetes,1IPH5@117747|Sphingobacteriia	976|Bacteroidetes	S	Bacterial protein of unknown function (DUF853)	-	-	-	ko:K06915	-	-	-	-	ko00000	-	-	-	DUF853
BYD3_k127_547240_2	1122176.KB903598_gene4739	3.89e-72	261.0	2ENP2@1|root,33GAE@2|Bacteria,4NZIT@976|Bacteroidetes	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_547240_4	929713.NIASO_12095	4.743e-53	189.0	COG1408@1|root,COG1408@2|Bacteria,4NFCH@976|Bacteroidetes,1IPSC@117747|Sphingobacteriia	976|Bacteroidetes	S	DNA mismatch repair protein MutT	-	-	-	ko:K07098	-	-	-	-	ko00000	-	-	-	Metallophos
BYD3_k127_5501276_0	1085623.GNIT_0294	7.383e-125	409.0	COG0709@1|root,COG0709@2|Bacteria,1MWFG@1224|Proteobacteria,1RQ5Q@1236|Gammaproteobacteria,4652X@72275|Alteromonadaceae	1236|Gammaproteobacteria	E	Synthesizes selenophosphate from selenide and ATP	selD	GO:0000287,GO:0001887,GO:0003674,GO:0003824,GO:0004756,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006520,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009069,GO:0009070,GO:0009451,GO:0009987,GO:0010467,GO:0016053,GO:0016070,GO:0016259,GO:0016260,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016781,GO:0019752,GO:0034470,GO:0034641,GO:0034660,GO:0043167,GO:0043169,GO:0043170,GO:0043412,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0046872,GO:0070329,GO:0071704,GO:0090304,GO:1901360,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607	2.7.9.3	ko:K01008	ko00450,ko01100,map00450,map01100	-	R03595	RC00002,RC02878	ko00000,ko00001,ko01000,ko03016	-	-	iPC815.YPO2164,iSFV_1184.SFV_1453,iSF_1195.SF1459,iSFxv_1172.SFxv_1645,iS_1188.S1574	AIRS,AIRS_C
BYD3_k127_5501276_1	1089547.KB913013_gene2165	4.097e-88	302.0	COG2603@1|root,COG2603@2|Bacteria,4NH7W@976|Bacteroidetes,47KFW@768503|Cytophagia	976|Bacteroidetes	S	Rhodanese Homology Domain	-	-	-	ko:K06917	-	-	-	-	ko00000,ko01000,ko03016	-	-	-	Rhodanese
BYD3_k127_5501276_2	760192.Halhy_6084	4.599e-50	183.0	COG5018@1|root,COG5018@2|Bacteria	2|Bacteria	L	Exonuclease	exoN1	-	-	-	-	-	-	-	-	-	-	-	RNase_T
BYD3_k127_5501276_3	1313421.JHBV01000014_gene3858	2.673e-39	154.0	COG2937@1|root,COG2937@2|Bacteria,4NK5H@976|Bacteroidetes	976|Bacteroidetes	I	Belongs to the GPAT DAPAT family	plsB	-	2.3.1.15	ko:K00631	ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110	M00089	R00851,R09380	RC00004,RC00039,RC00041	ko00000,ko00001,ko00002,ko01000,ko01004	-	-	-	Acyltransferase
BYD3_k127_5508831_2	760192.Halhy_1466	4.773e-100	331.0	COG1611@1|root,COG1611@2|Bacteria,4NF20@976|Bacteroidetes,1IQ3T@117747|Sphingobacteriia	976|Bacteroidetes	S	Belongs to the LOG family	fmt2	-	3.2.2.10	ko:K06966	ko00230,ko00240,map00230,map00240	-	R00182,R00510	RC00063,RC00318	ko00000,ko00001,ko01000	-	-	-	Lysine_decarbox
BYD3_k127_5508831_0	984262.SGRA_0764	3.149e-180	572.0	COG2204@1|root,COG2204@2|Bacteria,4NE89@976|Bacteroidetes,1IPCA@117747|Sphingobacteriia	976|Bacteroidetes	T	COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains	ntrX	-	-	-	-	-	-	-	-	-	-	-	HTH_8,Response_reg,Sigma54_activat
BYD3_k127_5508831_1	1122179.KB890458_gene821	3.532e-132	432.0	COG1473@1|root,COG1473@2|Bacteria,4NGBI@976|Bacteroidetes,1INTB@117747|Sphingobacteriia	976|Bacteroidetes	S	amidohydrolase	-	-	-	-	-	-	-	-	-	-	-	-	M20_dimer,Peptidase_M20
BYD3_k127_5510310_1	760192.Halhy_2933	8.665e-119	396.0	2CIBF@1|root,2Z85N@2|Bacteria,4NF0J@976|Bacteroidetes	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_5510310_2	760192.Halhy_2934	8.102e-50	184.0	COG0526@1|root,COG0526@2|Bacteria,4NNHX@976|Bacteroidetes,1J07P@117747|Sphingobacteriia	976|Bacteroidetes	CO	Thioredoxin	-	-	-	-	-	-	-	-	-	-	-	-	AhpC-TSA,Redoxin
BYD3_k127_5510310_0	1122176.KB903569_gene3481	1.911e-307	958.0	COG0514@1|root,COG0514@2|Bacteria,4NEB4@976|Bacteroidetes,1IQ8E@117747|Sphingobacteriia	976|Bacteroidetes	L	ATP-dependent DNA helicase RecQ	recQ	-	3.6.4.12	ko:K03654	ko03018,map03018	-	-	-	ko00000,ko00001,ko01000,ko03400	-	-	-	DEAD,HRDC,Helicase_C,RQC,RecQ_Zn_bind
BYD3_k127_5510310_3	471854.Dfer_2796	7.103e-46	169.0	COG0757@1|root,COG0757@2|Bacteria,4NNHU@976|Bacteroidetes,47PUX@768503|Cytophagia	976|Bacteroidetes	E	Catalyzes a trans-dehydration via an enolate intermediate	aroQ	-	4.2.1.10	ko:K03786	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	M00022	R03084	RC00848	ko00000,ko00001,ko00002,ko01000	-	-	-	DHquinase_II
BYD3_k127_5510310_4	1313421.JHBV01000007_gene4286	1.148e-28	119.0	COG4845@1|root,COG4845@2|Bacteria,4NPDG@976|Bacteroidetes,1IS3J@117747|Sphingobacteriia	976|Bacteroidetes	V	Chloramphenicol acetyltransferase	cat	-	2.3.1.28	ko:K19271	-	-	-	-	br01600,ko00000,ko01000,ko01504	-	-	-	CAT
BYD3_k127_5514027_1	1268240.ATFI01000006_gene955	2.643e-78	282.0	COG1629@1|root,COG4771@2|Bacteria,4NF4B@976|Bacteroidetes,2FM7I@200643|Bacteroidia,4AKRS@815|Bacteroidaceae	976|Bacteroidetes	P	TonB-dependent receptor	-	-	-	-	-	-	-	-	-	-	-	-	CarbopepD_reg_2,Plug,STN,TonB_dep_Rec
BYD3_k127_5514027_0	760192.Halhy_0833	4.794e-169	538.0	COG0617@1|root,COG0617@2|Bacteria,4NF1S@976|Bacteroidetes,1IPB1@117747|Sphingobacteriia	976|Bacteroidetes	J	tRNA nucleotidyltransferase	cca	-	2.7.7.19,2.7.7.72	ko:K00970,ko:K00974	ko03013,ko03018,map03013,map03018	-	R09382,R09383,R09384,R09386	RC00078	ko00000,ko00001,ko01000,ko03016,ko03019	-	-	-	HD,PolyA_pol,PolyA_pol_RNAbd
BYD3_k127_5522838_3	643867.Ftrac_1376	5.636e-45	173.0	COG1277@1|root,COG1277@2|Bacteria,4NEES@976|Bacteroidetes,47WZW@768503|Cytophagia	976|Bacteroidetes	S	Excinuclease ABC subunit B	-	-	-	-	-	-	-	-	-	-	-	-	ABC2_membrane_2,ABC2_membrane_4
BYD3_k127_5522838_2	643867.Ftrac_1377	6.566e-83	286.0	COG1131@1|root,COG1131@2|Bacteria,4NFNM@976|Bacteroidetes,47Q1V@768503|Cytophagia	976|Bacteroidetes	V	AAA domain, putative AbiEii toxin, Type IV TA system	-	-	-	ko:K01990	-	M00254	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	ABC_tran
BYD3_k127_5522838_1	760192.Halhy_3260	2.854e-104	346.0	COG0224@1|root,COG0224@2|Bacteria,4NECM@976|Bacteroidetes,1IQEQ@117747|Sphingobacteriia	976|Bacteroidetes	C	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex	atpG	-	-	ko:K02115	ko00190,ko00195,ko01100,map00190,map00195,map01100	M00157	-	-	ko00000,ko00001,ko00002,ko00194	3.A.2.1	-	-	ATP-synt
BYD3_k127_5522838_0	760192.Halhy_3259	8.477e-292	901.0	COG0056@1|root,COG0056@2|Bacteria,4NFZW@976|Bacteroidetes,1IP4E@117747|Sphingobacteriia	976|Bacteroidetes	C	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit	atpA	-	3.6.3.14	ko:K02111	ko00190,ko00195,ko01100,map00190,map00195,map01100	M00157	-	-	ko00000,ko00001,ko00002,ko00194,ko01000	3.A.2.1	-	-	ATP-synt_ab,ATP-synt_ab_C,ATP-synt_ab_N
BYD3_k127_5522838_4	1122176.KB903565_gene3386	1.229e-37	147.0	COG0712@1|root,COG0712@2|Bacteria,4NSNF@976|Bacteroidetes,1ISSR@117747|Sphingobacteriia	976|Bacteroidetes	C	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation	atpH	-	-	ko:K02113	ko00190,ko00195,ko01100,map00190,map00195,map01100	M00157	-	-	ko00000,ko00001,ko00002,ko00194	3.A.2.1	-	-	OSCP
BYD3_k127_5541714_3	760192.Halhy_6126	1.35e-13	72.0	COG0538@1|root,COG0538@2|Bacteria,4PKW6@976|Bacteroidetes,1IPFB@117747|Sphingobacteriia	976|Bacteroidetes	C	Isocitrate dehydrogenase	icd	-	1.1.1.42	ko:K00031	ko00020,ko00480,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01210,ko01230,ko04146,map00020,map00480,map00720,map01100,map01110,map01120,map01130,map01200,map01210,map01230,map04146	M00009,M00010,M00173,M00740	R00267,R00268,R01899	RC00001,RC00084,RC00114,RC00626,RC02801	br01601,ko00000,ko00001,ko00002,ko01000	-	-	-	Iso_dh
BYD3_k127_5541714_0	760192.Halhy_6127	6.836e-162	515.0	COG2255@1|root,COG2255@2|Bacteria,4NEB9@976|Bacteroidetes,1IR3Y@117747|Sphingobacteriia	976|Bacteroidetes	L	The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing	ruvB	-	3.6.4.12	ko:K03551	ko03440,map03440	-	-	-	ko00000,ko00001,ko01000,ko03400	-	-	-	RuvB_C,RuvB_N
BYD3_k127_5541714_2	1123057.P872_07690	3.574e-42	162.0	COG1418@1|root,COG1418@2|Bacteria,4NFAG@976|Bacteroidetes,47XX2@768503|Cytophagia	976|Bacteroidetes	S	Phosphohydrolase	-	-	-	-	-	-	-	-	-	-	-	-	HD
BYD3_k127_5541714_1	700598.Niako_0267	5.668e-129	441.0	COG2982@1|root,COG2982@2|Bacteria,4NHD3@976|Bacteroidetes,1IQUD@117747|Sphingobacteriia	976|Bacteroidetes	M	AsmA family	-	-	-	-	-	-	-	-	-	-	-	-	AsmA,AsmA_2,DUF3971
BYD3_k127_5541714_4	760192.Halhy_5394	0.0001651	44.0	COG4191@1|root,COG4191@2|Bacteria,4NSNP@976|Bacteroidetes,1ISVX@117747|Sphingobacteriia	976|Bacteroidetes	T	Protein of unknown function (DUF3467)	-	-	-	-	-	-	-	-	-	-	-	-	DUF3467
BYD3_k127_5542679_0	700598.Niako_2016	3.176e-157	502.0	COG0618@1|root,COG0618@2|Bacteria,4NEXE@976|Bacteroidetes,1IPG0@117747|Sphingobacteriia	976|Bacteroidetes	S	phosphoesterase RecJ domain protein	nrnA	-	3.1.13.3,3.1.3.7	ko:K06881	ko00920,ko01100,ko01120,map00920,map01100,map01120	-	R00188,R00508	RC00078	ko00000,ko00001,ko01000,ko03400	-	-	-	DHH,DHHA1
BYD3_k127_5542679_1	1122605.KB893643_gene865	4.615e-64	222.0	COG0105@1|root,COG0105@2|Bacteria,4NM5B@976|Bacteroidetes,1ISC1@117747|Sphingobacteriia	976|Bacteroidetes	F	Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate	ndk	-	2.7.4.6	ko:K00940	ko00230,ko00240,ko00983,ko01100,ko01110,ko01130,ko04016,map00230,map00240,map00983,map01100,map01110,map01130,map04016	M00049,M00050,M00052,M00053	R00124,R00139,R00156,R00330,R00570,R00722,R01137,R01857,R02093,R02326,R02331,R03530,R11894,R11895	RC00002	ko00000,ko00001,ko00002,ko01000,ko04131	-	-	-	NDK
BYD3_k127_5542679_2	1123248.KB893314_gene3473	3.641e-49	179.0	COG2259@1|root,COG2259@2|Bacteria,4NP94@976|Bacteroidetes,1IST7@117747|Sphingobacteriia	976|Bacteroidetes	S	DoxX family	-	-	-	-	-	-	-	-	-	-	-	-	DoxX
BYD3_k127_5580357_2	1173020.Cha6605_3691	6.88e-89	295.0	COG0399@1|root,COG0399@2|Bacteria,1G0XH@1117|Cyanobacteria	1117|Cyanobacteria	E	Belongs to the DegT DnrJ EryC1 family	rfbE	-	2.6.1.102	ko:K13010	ko00520,map00520	-	R10460	RC00006,RC00781	ko00000,ko00001,ko01000,ko01005,ko01007	-	-	-	DegT_DnrJ_EryC1
BYD3_k127_5580357_0	1173020.Cha6605_3690	1.972e-114	373.0	COG3510@1|root,COG3510@2|Bacteria,1G2TB@1117|Cyanobacteria	1117|Cyanobacteria	V	Cephalosporin hydroxylase	-	-	-	-	-	-	-	-	-	-	-	-	CmcI
BYD3_k127_5580357_1	557599.MKAN_27475	3.218e-102	338.0	COG4122@1|root,COG4122@2|Bacteria,2IA2G@201174|Actinobacteria	201174|Actinobacteria	S	Macrocin-O-methyltransferase (TylF)	-	-	-	ko:K19856,ko:K21325	ko00523,ko01130,map00523,map01130	M00799	R11041,R11469	RC00003,RC00466	ko00000,ko00001,ko00002,ko01000	-	-	-	Methyltransf_24,TylF
BYD3_k127_5580357_3	1148.1651985	3.111e-57	207.0	COG0451@1|root,COG0451@2|Bacteria	2|Bacteria	GM	ADP-glyceromanno-heptose 6-epimerase activity	-	-	4.1.1.35,4.2.1.46,5.1.3.2,5.1.3.6	ko:K01710,ko:K01784,ko:K08678,ko:K08679	ko00052,ko00520,ko00521,ko00523,ko00525,ko01055,ko01100,ko01130,map00052,map00520,map00521,map00523,map00525,map01055,map01100,map01130	M00361,M00362,M00632,M00793	R00291,R01384,R01385,R02984,R06513	RC00289,RC00402,RC00508	ko00000,ko00001,ko00002,ko01000	-	-	-	Epimerase
BYD3_k127_559416_3	1121382.JQKG01000010_gene4721	3.717e-09	58.0	COG2323@1|root,COG2323@2|Bacteria,1WMG8@1297|Deinococcus-Thermus	1297|Deinococcus-Thermus	S	Protein of unknown function (DUF421)	-	-	-	-	-	-	-	-	-	-	-	-	DUF421
BYD3_k127_559416_0	445961.IW15_11200	0.0	1018.0	COG0693@1|root,COG0753@1|root,COG0693@2|Bacteria,COG0753@2|Bacteria,4NFQX@976|Bacteroidetes,1HWVN@117743|Flavobacteriia,3ZNHW@59732|Chryseobacterium	976|Bacteroidetes	P	serves to protect cells from the toxic effects of hydrogen peroxide	katE	-	1.11.1.6	ko:K03781	ko00380,ko00630,ko01110,ko01130,ko01200,ko04011,ko04016,ko04068,ko04146,ko04211,ko04212,ko04213,ko05014,map00380,map00630,map01110,map01130,map01200,map04011,map04016,map04068,map04146,map04211,map04212,map04213,map05014	M00532	R00009,R00602,R02670	RC00034,RC00767,RC02141,RC02755	ko00000,ko00001,ko00002,ko01000	-	-	-	Catalase,Catalase-rel,DJ-1_PfpI
BYD3_k127_559416_1	1117315.AHCA01000001_gene2365	2.065e-46	182.0	COG1680@1|root,COG1680@2|Bacteria,1R49D@1224|Proteobacteria,1S2PV@1236|Gammaproteobacteria,2Q36V@267888|Pseudoalteromonadaceae	1236|Gammaproteobacteria	V	Beta-lactamase	-	-	-	-	-	-	-	-	-	-	-	-	Beta-lactamase
BYD3_k127_559416_2	1121895.Q765_17575	1.295e-24	120.0	COG0526@1|root,COG0526@2|Bacteria,4P2YC@976|Bacteroidetes,1I8S9@117743|Flavobacteriia,2NTRQ@237|Flavobacterium	976|Bacteroidetes	CO	Redoxin	-	-	-	-	-	-	-	-	-	-	-	-	Redoxin
BYD3_k127_559416_4	755732.Fluta_1725	2.626e-07	64.0	COG3419@1|root,COG5184@1|root,COG3419@2|Bacteria,COG5184@2|Bacteria,4NNEI@976|Bacteroidetes,1I637@117743|Flavobacteriia	976|Bacteroidetes	DZ	Putative metal-binding motif	-	-	-	-	-	-	-	-	-	-	-	-	Cu-binding_MopE,DUF1566
BYD3_k127_5613518_5	313596.RB2501_04490	9.212e-05	50.0	COG0457@1|root,COG5616@1|root,COG0457@2|Bacteria,COG5616@2|Bacteria,4NKQV@976|Bacteroidetes,1HYSN@117743|Flavobacteriia	976|Bacteroidetes	T	Pfam Adenylate and Guanylate cyclase catalytic domain	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_5613518_1	984262.SGRA_1771	1.633e-272	850.0	COG0043@1|root,COG0043@2|Bacteria,4NHHV@976|Bacteroidetes,1IR14@117747|Sphingobacteriia	976|Bacteroidetes	H	Belongs to the UbiD family	-	-	4.1.1.98	ko:K03182	ko00130,ko01100,ko01110,map00130,map01100,map01110	M00117	R04985,R04986	RC00391	ko00000,ko00001,ko00002,ko01000	-	-	-	UbiD
BYD3_k127_5613518_2	649349.Lbys_3143	2.002e-94	325.0	COG0144@1|root,COG3270@1|root,COG0144@2|Bacteria,COG3270@2|Bacteria,4NEV7@976|Bacteroidetes,47KID@768503|Cytophagia	976|Bacteroidetes	J	RNA-binding PUA-like domain of methyltransferase RsmF	rsmF	-	-	-	-	-	-	-	-	-	-	-	Methyltr_RsmB-F,Methyltr_RsmF_N,Methyltranf_PUA
BYD3_k127_5613518_4	1550091.JROE01000022_gene3315	6.926e-39	151.0	COG0801@1|root,COG0801@2|Bacteria,4NGE8@976|Bacteroidetes,1IT8Z@117747|Sphingobacteriia	976|Bacteroidetes	H	PFAM 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK	folK	-	2.7.6.3	ko:K00950	ko00790,ko01100,map00790,map01100	M00126,M00841	R03503	RC00002,RC00017	ko00000,ko00001,ko00002,ko01000	-	-	-	HPPK,dNK
BYD3_k127_5613518_3	760192.Halhy_5126	7.877e-72	250.0	COG1428@1|root,COG1428@2|Bacteria,4PM5R@976|Bacteroidetes,1IXF2@117747|Sphingobacteriia	976|Bacteroidetes	F	Thymidylate kinase	-	-	-	-	-	-	-	-	-	-	-	-	dNK
BYD3_k127_5613518_6	391598.FBBAL38_07175	0.0001325	51.0	28M10@1|root,2ZAFW@2|Bacteria,4NIF8@976|Bacteroidetes,1HYJ2@117743|Flavobacteriia	976|Bacteroidetes	S	Domain of unknown function (DUF4403)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4403
BYD3_k127_5613518_0	1237149.C900_02615	0.0	1212.0	COG4447@1|root,COG4447@2|Bacteria,4NESU@976|Bacteroidetes,47M5A@768503|Cytophagia	976|Bacteroidetes	S	Sortilin, neurotensin receptor 3,	-	-	-	-	-	-	-	-	-	-	-	-	Sortilin-Vps10
BYD3_k127_5649174_7	385682.AFSL01000014_gene2749	5.937e-08	54.0	COG0143@1|root,COG0143@2|Bacteria,4NECB@976|Bacteroidetes,2FNV6@200643|Bacteroidia,3XJMR@558415|Marinilabiliaceae	976|Bacteroidetes	J	Putative tRNA binding domain	metG	GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:1901360,GO:1901564,GO:1901566,GO:1901576	6.1.1.10	ko:K01874	ko00450,ko00970,map00450,map00970	M00359,M00360	R03659,R04773	RC00055,RC00523	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	-	-	-	Anticodon_1,tRNA-synt_1g,tRNA_bind
BYD3_k127_5649174_2	1122176.KB903532_gene2631	6.363e-130	435.0	COG0815@1|root,COG0815@2|Bacteria,4NG4X@976|Bacteroidetes,1IQGK@117747|Sphingobacteriia	976|Bacteroidetes	M	apolipoprotein N-acyltransferase	lnt	-	-	ko:K03820	-	-	-	-	ko00000,ko01000	-	GT2	-	CN_hydrolase
BYD3_k127_5649174_4	760192.Halhy_5577	3.284e-23	101.0	2ET4W@1|root,33KNZ@2|Bacteria,4P5X3@976|Bacteroidetes	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_5649174_5	760192.Halhy_5577	1.066e-22	100.0	2ET4W@1|root,33KNZ@2|Bacteria,4P5X3@976|Bacteroidetes	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_5649174_6	760192.Halhy_0914	3.352e-15	84.0	2EKHJ@1|root,33E7I@2|Bacteria,4P6IY@976|Bacteroidetes	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_5649174_0	760192.Halhy_1387	8.14e-227	710.0	COG0114@1|root,COG0114@2|Bacteria,4NEQP@976|Bacteroidetes,1IPCY@117747|Sphingobacteriia	976|Bacteroidetes	C	Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate	fumC	-	4.2.1.2	ko:K01679	ko00020,ko00620,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko04934,ko05200,ko05211,map00020,map00620,map00720,map01100,map01110,map01120,map01130,map01200,map04934,map05200,map05211	M00009,M00011,M00173,M00376	R01082	RC00443	ko00000,ko00001,ko00002,ko01000	-	-	-	FumaraseC_C,Lyase_1
BYD3_k127_5649174_1	1121904.ARBP01000009_gene4389	2.07e-153	496.0	COG0671@1|root,COG0671@2|Bacteria,4NF9W@976|Bacteroidetes,47JAV@768503|Cytophagia	976|Bacteroidetes	I	PAP2 superfamily	-	-	-	-	-	-	-	-	-	-	-	-	PAP2
BYD3_k127_5649174_3	1313421.JHBV01000021_gene4813	3.985e-49	183.0	COG0604@1|root,COG0604@2|Bacteria,4NPBM@976|Bacteroidetes,1ITI8@117747|Sphingobacteriia	976|Bacteroidetes	C	PFAM Alcohol dehydrogenase GroES-like domain	-	-	1.6.5.5	ko:K00344	-	-	-	-	ko00000,ko01000	-	-	-	ADH_N,ADH_zinc_N
BYD3_k127_566066_3	1313421.JHBV01000039_gene2626	1.53e-24	108.0	COG0189@1|root,COG0189@2|Bacteria,4NED4@976|Bacteroidetes,1IUHW@117747|Sphingobacteriia	976|Bacteroidetes	HJ	Belongs to the prokaryotic GSH synthase family	gshB	-	6.3.2.3	ko:K01920	ko00270,ko00480,ko01100,map00270,map00480,map01100	M00118	R00497,R10994	RC00096,RC00141	ko00000,ko00001,ko00002,ko01000	-	-	-	GSH-S_ATP,GSH-S_N
BYD3_k127_566066_0	760192.Halhy_4058	1.815e-198	629.0	COG0189@1|root,COG0189@2|Bacteria,4NH5R@976|Bacteroidetes	976|Bacteroidetes	HJ	ligase activity	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_566066_2	757424.Hsero_3284	1.711e-55	200.0	COG1611@1|root,COG1611@2|Bacteria,1RD59@1224|Proteobacteria,2VRA6@28216|Betaproteobacteria,473BN@75682|Oxalobacteraceae	28216|Betaproteobacteria	S	Belongs to the LOG family	yvdD_1	-	3.2.2.10	ko:K06966	ko00230,ko00240,map00230,map00240	-	R00182,R00510	RC00063,RC00318	ko00000,ko00001,ko01000	-	-	-	Lysine_decarbox
BYD3_k127_566066_1	984262.SGRA_3399	3.265e-122	405.0	COG0527@1|root,COG0527@2|Bacteria,4NF0M@976|Bacteroidetes,1IQ3C@117747|Sphingobacteriia	976|Bacteroidetes	E	Belongs to the aspartokinase family	lysC	-	2.7.2.4	ko:K00928	ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01210,map01230	M00016,M00017,M00018,M00033,M00525,M00526,M00527	R00480	RC00002,RC00043	ko00000,ko00001,ko00002,ko01000	-	-	-	AA_kinase
BYD3_k127_5662736_1	1123234.AUKI01000020_gene692	2.297e-31	129.0	2A7S8@1|root,30WR5@2|Bacteria,4PA49@976|Bacteroidetes,1IB3H@117743|Flavobacteriia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_5662736_0	1131812.JQMS01000001_gene2168	1.677e-166	529.0	COG2220@1|root,COG2220@2|Bacteria,4NENZ@976|Bacteroidetes,1HWY9@117743|Flavobacteriia,2NSUU@237|Flavobacterium	976|Bacteroidetes	S	Beta-lactamase superfamily domain	romA	-	-	-	-	-	-	-	-	-	-	-	Lactamase_B_2
BYD3_k127_5662736_2	376686.Fjoh_4174	2.806e-07	58.0	COG3291@1|root,COG3325@1|root,COG3408@1|root,COG3291@2|Bacteria,COG3325@2|Bacteria,COG3408@2|Bacteria,4NJQI@976|Bacteroidetes,1IJUY@117743|Flavobacteriia,2NTBM@237|Flavobacterium	976|Bacteroidetes	G	Belongs to the glycosyl hydrolase 18 family	-	-	-	-	-	-	-	-	-	-	-	-	CBM_6,Crystall,PKD,PPC,Reprolysin_3,RicinB_lectin_2
BYD3_k127_5697116_5	1122176.KB903565_gene3224	2.973e-12	78.0	COG0810@1|root,COG0810@2|Bacteria	2|Bacteria	M	energy transducer activity	-	-	3.2.1.8	ko:K01181,ko:K03832	-	-	-	-	ko00000,ko01000,ko02000	2.C.1.1	-	-	DUF2637,TonB_C
BYD3_k127_5697116_0	760192.Halhy_2788	1.255e-243	760.0	COG0442@1|root,COG0442@2|Bacteria,4NEAF@976|Bacteroidetes,1IQ4M@117747|Sphingobacteriia	976|Bacteroidetes	J	Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro)	proS	GO:0003674,GO:0003824,GO:0004812,GO:0004827,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006433,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0017101,GO:0019538,GO:0019752,GO:0032991,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576	6.1.1.15	ko:K01881	ko00970,map00970	M00359,M00360	R03661	RC00055,RC00523	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	-	-	-	HGTP_anticodon,ProRS-C_1,tRNA-synt_2b
BYD3_k127_5697116_2	760192.Halhy_3005	2.363e-35	138.0	COG0629@1|root,COG0629@2|Bacteria,4PGRJ@976|Bacteroidetes,1IU5E@117747|Sphingobacteriia	976|Bacteroidetes	L	Domain of unknown function (DUF3127)	-	-	-	-	-	-	-	-	-	-	-	-	DUF3127
BYD3_k127_5697116_1	926549.KI421517_gene3501	3.204e-54	201.0	COG0457@1|root,COG0457@2|Bacteria,4P246@976|Bacteroidetes,47ME2@768503|Cytophagia	976|Bacteroidetes	S	Protein of unknown function (DUF2911)	-	-	-	-	-	-	-	-	-	-	-	-	DUF2911,TPR_8
BYD3_k127_5697116_4	1122176.KB903536_gene1877	3.672e-21	100.0	COG1361@1|root,COG2304@1|root,COG2866@1|root,COG3210@1|root,COG3291@1|root,COG4935@1|root,COG1361@2|Bacteria,COG2304@2|Bacteria,COG2866@2|Bacteria,COG3210@2|Bacteria,COG3291@2|Bacteria,COG4935@2|Bacteria,4P8KP@976|Bacteroidetes,1IYSQ@117747|Sphingobacteriia	976|Bacteroidetes	U	IMG reference gene	-	-	-	-	-	-	-	-	-	-	-	-	HYR
BYD3_k127_571342_18	984262.SGRA_1836	4.112e-22	98.0	COG0186@1|root,COG0186@2|Bacteria,4NSB2@976|Bacteroidetes,1IT9T@117747|Sphingobacteriia	976|Bacteroidetes	J	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA	rpsQ	GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904	-	ko:K02961	ko03010,map03010	M00178,M00179	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_S17
BYD3_k127_571342_17	1122176.KB903535_gene1945	2.326e-23	103.0	COG0255@1|root,COG0255@2|Bacteria	2|Bacteria	J	Belongs to the universal ribosomal protein uL29 family	rpmC	GO:0000027,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0040007,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:1901564,GO:1901566,GO:1901576,GO:1990904	-	ko:K02904	ko03010,map03010	M00178,M00179	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_L29
BYD3_k127_571342_10	1122176.KB903535_gene1946	8.086e-62	215.0	COG0197@1|root,COG0197@2|Bacteria,4NM87@976|Bacteroidetes,1IRSN@117747|Sphingobacteriia	976|Bacteroidetes	J	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs	rplP	GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0097159,GO:1901363,GO:1990904	-	ko:K02878	ko03010,map03010	M00178	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_L16
BYD3_k127_571342_4	760192.Halhy_4748	4.911e-123	400.0	COG0092@1|root,COG0092@2|Bacteria,4NE9F@976|Bacteroidetes,1IPKE@117747|Sphingobacteriia	976|Bacteroidetes	J	Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation	rpsC	GO:0002181,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904	-	ko:K02982	ko03010,map03010	M00178,M00179	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	KH_2,Ribosomal_S3_C
BYD3_k127_571342_13	760192.Halhy_4747	7.716e-45	165.0	COG0091@1|root,COG0091@2|Bacteria,4NQ8E@976|Bacteroidetes,1ISMN@117747|Sphingobacteriia	976|Bacteroidetes	J	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome	rplV	GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904	-	ko:K02890	ko03010,map03010	M00178,M00179	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_L22
BYD3_k127_571342_14	984262.SGRA_1841	1.343e-39	148.0	COG0185@1|root,COG0185@2|Bacteria,4NQ8T@976|Bacteroidetes,1ISXF@117747|Sphingobacteriia	976|Bacteroidetes	J	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA	rpsS	GO:0000028,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006996,GO:0008150,GO:0009987,GO:0015935,GO:0016043,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0042254,GO:0042255,GO:0042274,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043933,GO:0044085,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071826,GO:0071840,GO:1990904	-	ko:K02965	ko03010,map03010	M00178,M00179	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_S19
BYD3_k127_571342_3	1122179.KB890458_gene654	7.348e-127	410.0	COG0090@1|root,COG0090@2|Bacteria,4NE8G@976|Bacteroidetes,1INT6@117747|Sphingobacteriia	976|Bacteroidetes	J	One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity	rplB	GO:0002181,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904	-	ko:K02886	ko03010,map03010	M00178,M00179	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_L2,Ribosomal_L2_C
BYD3_k127_571342_15	1122176.KB903535_gene1951	6.594e-32	126.0	COG0089@1|root,COG0089@2|Bacteria,4NS7H@976|Bacteroidetes,1ITE2@117747|Sphingobacteriia	976|Bacteroidetes	J	One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome	rplW	-	-	ko:K02892	ko03010,map03010	M00178,M00179	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_L23
BYD3_k127_571342_6	760192.Halhy_4743	4.762e-70	243.0	COG0088@1|root,COG0088@2|Bacteria,4NEWZ@976|Bacteroidetes,1IRTU@117747|Sphingobacteriia	976|Bacteroidetes	J	Forms part of the polypeptide exit tunnel	rplD	-	-	ko:K02926	ko03010,map03010	M00178	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_L4
BYD3_k127_571342_5	1122176.KB903535_gene1953	3.132e-90	301.0	COG0087@1|root,COG0087@2|Bacteria,4NEAN@976|Bacteroidetes,1IPGZ@117747|Sphingobacteriia	976|Bacteroidetes	J	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit	rplC	-	-	ko:K02906	ko03010,map03010	M00178,M00179	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_L3
BYD3_k127_571342_11	760192.Halhy_4741	7.276e-57	199.0	COG0051@1|root,COG0051@2|Bacteria,4NQ65@976|Bacteroidetes,1ISQN@117747|Sphingobacteriia	976|Bacteroidetes	J	Involved in the binding of tRNA to the ribosomes	rpsJ	GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904	-	ko:K02946	ko03010,map03010	M00178,M00179	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_S10
BYD3_k127_571342_0	760192.Halhy_4740	0.0	1214.0	COG0480@1|root,COG0480@2|Bacteria,4NE9X@976|Bacteroidetes,1INUJ@117747|Sphingobacteriia	976|Bacteroidetes	J	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome	fusA	-	-	ko:K02355	-	-	-	-	ko00000,ko03012,ko03029	-	-	-	EFG_C,EFG_II,EFG_IV,GTP_EFTU,GTP_EFTU_D2
BYD3_k127_571342_7	760192.Halhy_4739	4.908e-70	239.0	COG0049@1|root,COG0049@2|Bacteria,4NEEM@976|Bacteroidetes,1IRJ7@117747|Sphingobacteriia	976|Bacteroidetes	J	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA	rpsG	GO:0000028,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904	-	ko:K02992	ko03010,map03010	M00178,M00179	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_S7
BYD3_k127_571342_9	760192.Halhy_4738	1.226e-65	225.0	COG0048@1|root,COG0048@2|Bacteria,4NM3Y@976|Bacteroidetes	976|Bacteroidetes	J	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit	rpsL	GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904	-	ko:K02950	ko03010,map03010	M00178,M00179	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosom_S12_S23
BYD3_k127_571342_12	760192.Halhy_1262	3.909e-46	171.0	COG0454@1|root,COG0456@2|Bacteria,4NNJS@976|Bacteroidetes,1J0WI@117747|Sphingobacteriia	976|Bacteroidetes	K	Acetyltransferase (GNAT) domain	-	-	2.3.1.57	ko:K00657	ko00330,ko01100,ko04216,map00330,map01100,map04216	M00135	R01154	RC00004,RC00096	ko00000,ko00001,ko00002,ko01000	-	-	-	Acetyltransf_1
BYD3_k127_571342_16	760192.Halhy_2539	2.722e-30	124.0	COG1416@1|root,COG1416@2|Bacteria,4NUNC@976|Bacteroidetes,1IUMY@117747|Sphingobacteriia	976|Bacteroidetes	S	PFAM DsrE DsrF-like family	-	-	-	ko:K09004	-	-	-	-	ko00000	-	-	-	DrsE
BYD3_k127_571342_1	760192.Halhy_2538	2.142e-267	832.0	COG0737@1|root,COG0737@2|Bacteria,4NESM@976|Bacteroidetes,1IVAT@117747|Sphingobacteriia	976|Bacteroidetes	F	COGs COG0737 5'-nucleotidase 2' 3'-cyclic phosphodiesterase and related esterase	-	-	3.1.3.5,3.6.1.45	ko:K01081,ko:K11751	ko00230,ko00240,ko00760,ko01100,ko01110,map00230,map00240,map00760,map01100,map01110	-	R00183,R00511,R00963,R01126,R01227,R01569,R01664,R01968,R02088,R02102,R02323,R02719,R03346	RC00017	ko00000,ko00001,ko01000	-	-	-	5_nucleotid_C,Metallophos
BYD3_k127_571342_2	760192.Halhy_2537	1.245e-136	443.0	COG3258@1|root,COG3258@2|Bacteria,4NGIH@976|Bacteroidetes,1IRZ3@117747|Sphingobacteriia	976|Bacteroidetes	C	Cytochrome C oxidase, cbb3-type, subunit III	-	-	1.8.2.2	ko:K19713	-	-	-	-	ko00000,ko01000	-	-	-	Cytochrom_C,Cytochrome_CBB3
BYD3_k127_571342_8	1202532.FF52_08539	2.263e-67	230.0	COG2391@1|root,COG2391@2|Bacteria,4NQ9C@976|Bacteroidetes,1I29E@117743|Flavobacteriia,2NW8V@237|Flavobacterium	976|Bacteroidetes	S	Transporter	-	-	-	ko:K07112	-	-	-	-	ko00000	-	-	-	Sulf_transp
BYD3_k127_5723024_2	1122176.KB903531_gene2951	5.04e-34	136.0	COG4206@1|root,COG4206@2|Bacteria,4NGYD@976|Bacteroidetes,1J0XR@117747|Sphingobacteriia	976|Bacteroidetes	H	Psort location OuterMembrane, score	-	-	-	-	-	-	-	-	-	-	-	-	TonB_dep_Rec
BYD3_k127_5723024_1	153721.MYP_4328	1.852e-64	228.0	COG0169@1|root,COG0169@2|Bacteria,4NEBJ@976|Bacteroidetes,47JZN@768503|Cytophagia	976|Bacteroidetes	E	PFAM Shikimate dehydrogenase substrate binding domain	aroE	-	1.1.1.25	ko:K00014	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	M00022	R02413	RC00206	ko00000,ko00001,ko00002,ko01000	-	-	-	Shikimate_dh_N
BYD3_k127_5723024_0	1313421.JHBV01000027_gene1736	2.856e-124	409.0	COG0506@1|root,COG0506@2|Bacteria,4NEH5@976|Bacteroidetes,1IQ4H@117747|Sphingobacteriia	976|Bacteroidetes	E	Proline dehydrogenase	putA	-	-	ko:K00318	ko00330,ko01100,ko01110,ko01130,map00330,map01100,map01110,map01130	-	R10507	RC00083	ko00000,ko00001,ko01000	-	-	-	Pro_dh
BYD3_k127_5723024_4	700598.Niako_6538	3.203e-27	111.0	COG1217@1|root,COG1217@2|Bacteria,4NDVM@976|Bacteroidetes,1IQXV@117747|Sphingobacteriia	976|Bacteroidetes	T	GTP-binding protein TypA	typA	-	-	ko:K06207	-	-	-	-	ko00000	-	-	-	EFG_C,GTP_EFTU,GTP_EFTU_D2
BYD3_k127_5725738_0	700598.Niako_3964	2.318e-246	771.0	COG0642@1|root,COG0745@1|root,COG0840@1|root,COG1511@1|root,COG2770@1|root,COG0745@2|Bacteria,COG0840@2|Bacteria,COG1511@2|Bacteria,COG2205@2|Bacteria,COG2770@2|Bacteria,4NH0W@976|Bacteroidetes,1IV53@117747|Sphingobacteriia	976|Bacteroidetes	T	GAF domain	-	-	-	ko:K03406	ko02020,ko02030,map02020,map02030	-	-	-	ko00000,ko00001,ko02035	-	-	-	GAF_2,HAMP,HATPase_c,HisKA,MCPsignal,PAS_4,PAS_9,Response_reg
BYD3_k127_5725738_2	700598.Niako_3963	6.879e-94	315.0	COG3437@1|root,COG4251@1|root,COG3437@2|Bacteria,COG4251@2|Bacteria,4NMAR@976|Bacteroidetes,1IX9J@117747|Sphingobacteriia	976|Bacteroidetes	T	His Kinase A (phosphoacceptor) domain	-	-	-	-	-	-	-	-	-	-	-	-	HATPase_c,HisKA,Response_reg
BYD3_k127_5725738_3	1173024.KI912154_gene924	2.601e-41	156.0	COG2199@1|root,COG2202@1|root,COG2203@1|root,COG4251@1|root,COG2202@2|Bacteria,COG2203@2|Bacteria,COG3706@2|Bacteria,COG4251@2|Bacteria,1G1Z5@1117|Cyanobacteria,1JHUP@1189|Stigonemataceae	1117|Cyanobacteria	T	GAF domain	-	-	-	-	-	-	-	-	-	-	-	-	GAF,HATPase_c,HisKA,PAS_3,Response_reg
BYD3_k127_5725738_1	401526.TcarDRAFT_2406	8.252e-95	321.0	COG3804@1|root,COG3804@2|Bacteria,1TRNF@1239|Firmicutes,4H7KW@909932|Negativicutes	909932|Negativicutes	C	Dihydrodipicolinate reductase, N-terminus	-	-	-	-	-	-	-	-	-	-	-	-	DapB_N
BYD3_k127_5725738_4	1237149.C900_02851	1.028e-16	84.0	COG1254@1|root,COG1254@2|Bacteria,4NVB4@976|Bacteroidetes,47RW5@768503|Cytophagia	976|Bacteroidetes	C	Acylphosphatase	acyP	-	3.6.1.7	ko:K01512	ko00620,ko00627,ko01120,map00620,map00627,map01120	-	R00317,R01421,R01515	RC00043	ko00000,ko00001,ko01000	-	-	-	Acylphosphatase
BYD3_k127_5725738_5	1121101.HMPREF1532_00656	3.569e-05	49.0	COG0810@1|root,COG0810@2|Bacteria,4NSYT@976|Bacteroidetes,2FP10@200643|Bacteroidia,4AMQ3@815|Bacteroidaceae	976|Bacteroidetes	M	Carboxypeptidase regulatory-like domain	-	-	-	-	-	-	-	-	-	-	-	-	CarbopepD_reg_2,TonB_C
BYD3_k127_5735491_2	1122176.KB903587_gene4484	0.0001461	47.0	COG2234@1|root,COG2234@2|Bacteria,4NENF@976|Bacteroidetes,1IPRF@117747|Sphingobacteriia	976|Bacteroidetes	S	Peptidase family M28	-	-	-	-	-	-	-	-	-	-	-	-	Peptidase_M28
BYD3_k127_5735491_1	216432.CA2559_00625	7.59e-43	170.0	COG3342@1|root,COG3342@2|Bacteria	2|Bacteria	S	Family of unknown function (DUF1028)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1028,MAM,Peptidase_M14,fn3
BYD3_k127_5735491_0	1237149.C900_05526	2.182e-46	184.0	2B31B@1|root,30VE8@2|Bacteria,4PC7Y@976|Bacteroidetes,47WXZ@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_575545_3	1122176.KB903537_gene1694	4.089e-05	51.0	COG0671@1|root,COG0671@2|Bacteria,4NV5Q@976|Bacteroidetes,1ITA7@117747|Sphingobacteriia	976|Bacteroidetes	I	PFAM Phosphatidic acid phosphatase type 2 haloperoxidase	-	-	-	-	-	-	-	-	-	-	-	-	PAP2
BYD3_k127_575545_1	1122176.KB903619_gene5417	6.135e-108	368.0	COG0795@1|root,COG0795@2|Bacteria,4NE8B@976|Bacteroidetes,1INY8@117747|Sphingobacteriia	976|Bacteroidetes	S	Permease, YjgP YjgQ family	-	-	-	ko:K07091	ko02010,map02010	M00320	-	-	ko00000,ko00001,ko00002,ko02000	1.B.42.1	-	-	YjgP_YjgQ
BYD3_k127_575545_0	1122176.KB903531_gene3022	9.044e-267	841.0	COG1629@1|root,COG1629@2|Bacteria,4NKDS@976|Bacteroidetes,1IXCR@117747|Sphingobacteriia	976|Bacteroidetes	P	Carboxypeptidase regulatory-like domain	-	-	-	-	-	-	-	-	-	-	-	-	CarbopepD_reg_2,Plug
BYD3_k127_575545_2	485918.Cpin_6261	4.749e-36	142.0	COG2227@1|root,COG2227@2|Bacteria,4NGVF@976|Bacteroidetes,1ISIV@117747|Sphingobacteriia	976|Bacteroidetes	H	PFAM Methyltransferase type 12	-	-	-	-	-	-	-	-	-	-	-	-	Methyltransf_23
BYD3_k127_579180_1	1123278.KB893500_gene191	3.628e-51	186.0	COG0457@1|root,COG1680@1|root,COG0457@2|Bacteria,COG1680@2|Bacteria,4NI1Z@976|Bacteroidetes,47Q5S@768503|Cytophagia	976|Bacteroidetes	V	Beta-lactamase	-	-	-	-	-	-	-	-	-	-	-	-	Beta-lactamase,DUF3471,TPR_2,TPR_8
BYD3_k127_579180_0	926562.Oweho_2578	1.054e-79	289.0	COG2931@1|root,COG2931@2|Bacteria,4P2B3@976|Bacteroidetes,1I8WB@117743|Flavobacteriia,2PBTD@246874|Cryomorphaceae	976|Bacteroidetes	Q	calcium- and calmodulin-responsive adenylate cyclase activity	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_5821560_0	485917.Phep_3413	2.912e-25	118.0	COG0457@1|root,COG2972@1|root,COG0457@2|Bacteria,COG2972@2|Bacteria,4NF45@976|Bacteroidetes,1INNQ@117747|Sphingobacteriia	976|Bacteroidetes	T	Histidine kinase	-	-	-	-	-	-	-	-	-	-	-	-	His_kinase,TPR_12,TPR_2,TPR_7,TPR_8
BYD3_k127_5878137_0	760192.Halhy_3247	1.44e-165	535.0	COG1680@1|root,COG1680@2|Bacteria,4NFUI@976|Bacteroidetes,1INWP@117747|Sphingobacteriia	976|Bacteroidetes	V	COGs COG1680 Beta-lactamase class C and other penicillin binding protein	-	-	-	-	-	-	-	-	-	-	-	-	Beta-lactamase,DUF3471
BYD3_k127_5878137_1	1121904.ARBP01000016_gene5279	1.84e-154	501.0	COG0247@1|root,COG0277@1|root,COG0247@2|Bacteria,COG0277@2|Bacteria,4NEK3@976|Bacteroidetes,47JNC@768503|Cytophagia	976|Bacteroidetes	C	FAD linked oxidases, C-terminal domain	-	-	-	-	-	-	-	-	-	-	-	-	CCG,FAD-oxidase_C,FAD_binding_4,Fer4_17,Fer4_8
BYD3_k127_5878137_2	1121904.ARBP01000016_gene5279	5.462e-129	426.0	COG0247@1|root,COG0277@1|root,COG0247@2|Bacteria,COG0277@2|Bacteria,4NEK3@976|Bacteroidetes,47JNC@768503|Cytophagia	976|Bacteroidetes	C	FAD linked oxidases, C-terminal domain	-	-	-	-	-	-	-	-	-	-	-	-	CCG,FAD-oxidase_C,FAD_binding_4,Fer4_17,Fer4_8
BYD3_k127_5878137_3	760192.Halhy_3773	3.253e-16	81.0	COG2124@1|root,COG2124@2|Bacteria,4NG9Z@976|Bacteroidetes,1IUUD@117747|Sphingobacteriia	976|Bacteroidetes	C	Cytochrome P450	-	-	-	-	-	-	-	-	-	-	-	-	p450
BYD3_k127_5881222_1	700598.Niako_2548	1.008e-82	278.0	COG0279@1|root,COG0279@2|Bacteria,4NJX7@976|Bacteroidetes,1IRJQ@117747|Sphingobacteriia	976|Bacteroidetes	G	Catalyzes the isomerization of sedoheptulose 7-phosphate in D-glycero-D-manno-heptose 7-phosphate	gmhA	-	5.3.1.28	ko:K03271	ko00540,ko01100,map00540,map01100	M00064	R05645,R09768,R09769	RC00434	ko00000,ko00001,ko00002,ko01000,ko01005	-	-	-	SIS_2
BYD3_k127_5881222_0	1122605.KB893637_gene3156	3.589e-131	432.0	COG0241@1|root,COG1208@1|root,COG0241@2|Bacteria,COG1208@2|Bacteria,4NFDB@976|Bacteroidetes,1IPMP@117747|Sphingobacteriia	976|Bacteroidetes	JM	Nucleotidyl transferase	gmhB	-	2.7.7.71	ko:K15669	ko00540,map00540	-	R09772	RC00002	ko00000,ko00001,ko01000	-	-	-	CBS,NTP_transferase
BYD3_k127_5881222_2	1035193.HMPREF9073_02140	9.532e-25	105.0	2DPPJ@1|root,332WE@2|Bacteria,4NV6D@976|Bacteroidetes,1IFHF@117743|Flavobacteriia,1ET18@1016|Capnocytophaga	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_5886161_4	1122176.KB903609_gene5253	1.747e-23	102.0	2CADI@1|root,32RR7@2|Bacteria,4NP51@976|Bacteroidetes,1ISX2@117747|Sphingobacteriia	976|Bacteroidetes	S	Lipopolysaccharide-assembly	lptE	-	-	-	-	-	-	-	-	-	-	-	LptE
BYD3_k127_5886161_6	1123277.KB893217_gene4579	0.0003618	51.0	2DPQE@1|root,332Z6@2|Bacteria,4PJKC@976|Bacteroidetes,47NUT@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_5886161_5	1122176.KB903531_gene2885	2.342e-23	101.0	COG1314@1|root,COG1314@2|Bacteria,4PJ7H@976|Bacteroidetes,1IZQE@117747|Sphingobacteriia	976|Bacteroidetes	U	Preprotein translocase SecG subunit	-	-	-	ko:K03075	ko02024,ko03060,ko03070,map02024,map03060,map03070	M00335	-	-	ko00000,ko00001,ko00002,ko02044	3.A.5.1,3.A.5.2	-	-	SecG
BYD3_k127_5886161_3	760192.Halhy_5730	3.15e-44	161.0	COG0234@1|root,COG0234@2|Bacteria,4NS7D@976|Bacteroidetes,1ITF1@117747|Sphingobacteriia	976|Bacteroidetes	O	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter	groS	GO:0003674,GO:0005488,GO:0005515,GO:0006457,GO:0006458,GO:0006950,GO:0006986,GO:0008150,GO:0009987,GO:0010033,GO:0035966,GO:0042221,GO:0043167,GO:0043169,GO:0046872,GO:0050896,GO:0051082,GO:0051084,GO:0051085,GO:0051087,GO:0061077	-	ko:K04078	-	-	-	-	ko00000,ko03029,ko03110	-	-	-	Cpn10
BYD3_k127_5886161_0	1122176.KB903531_gene2882	8.7e-276	856.0	COG0459@1|root,COG0459@2|Bacteria,4NDZM@976|Bacteroidetes,1INP2@117747|Sphingobacteriia	976|Bacteroidetes	O	Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions	groL	GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006457,GO:0006458,GO:0008150,GO:0009987,GO:0016465,GO:0032991,GO:0044183,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0051082,GO:0061077,GO:0101031,GO:1990220	-	ko:K04077	ko03018,ko04212,ko04940,ko05134,ko05152,map03018,map04212,map04940,map05134,map05152	-	-	-	ko00000,ko00001,ko03019,ko03029,ko03110,ko04147	-	-	-	Cpn60_TCP1
BYD3_k127_5886161_1	760192.Halhy_6523	3.593e-128	419.0	COG0115@1|root,COG0115@2|Bacteria,4NEJY@976|Bacteroidetes,1IP2X@117747|Sphingobacteriia	976|Bacteroidetes	EH	Branched-chain amino acid aminotransferase	ilvE	-	2.6.1.42	ko:K00826	ko00270,ko00280,ko00290,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00270,map00280,map00290,map00770,map01100,map01110,map01130,map01210,map01230	M00019,M00036,M00119,M00570	R01090,R01214,R02199,R10991	RC00006,RC00036	ko00000,ko00001,ko00002,ko01000,ko01007	-	-	-	Aminotran_4
BYD3_k127_5886161_2	1168289.AJKI01000002_gene2505	6.165e-47	174.0	COG0127@1|root,COG0127@2|Bacteria,4NM42@976|Bacteroidetes,2G28G@200643|Bacteroidia,3XK27@558415|Marinilabiliaceae	976|Bacteroidetes	F	Ham1 family	rdgB	GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009141,GO:0009143,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046434,GO:0046483,GO:0046700,GO:0047429,GO:0055086,GO:0071704,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901575,GO:1901576	3.6.1.66	ko:K02428	ko00230,map00230	-	R00426,R00720,R01855,R02100,R02720,R03531	RC00002	ko00000,ko00001,ko01000	-	-	-	Ham1p_like
BYD3_k127_5895477_5	1202532.FF52_04190	2.749e-44	168.0	COG3685@1|root,COG3685@2|Bacteria,4NMCT@976|Bacteroidetes,1I1BM@117743|Flavobacteriia,2NUHM@237|Flavobacterium	976|Bacteroidetes	S	Domain of unknown function (DUF892)	-	-	-	-	-	-	-	-	-	-	-	-	DUF892
BYD3_k127_5895477_3	1348583.ATLH01000029_gene1560	1.012e-48	179.0	COG2197@1|root,COG2197@2|Bacteria,4PKH3@976|Bacteroidetes,1IK7Z@117743|Flavobacteriia,1F9C7@104264|Cellulophaga	976|Bacteroidetes	T	SMART Signal transduction response regulator, receiver domain	-	-	-	-	-	-	-	-	-	-	-	-	Response_reg
BYD3_k127_5895477_4	1121899.Q764_12610	4.774e-46	173.0	COG2207@1|root,COG2207@2|Bacteria,4NMXA@976|Bacteroidetes,1I1NA@117743|Flavobacteriia,2NU54@237|Flavobacterium	976|Bacteroidetes	K	AraC family transcriptional regulator	-	-	-	-	-	-	-	-	-	-	-	-	HTH_18
BYD3_k127_5895477_7	1123278.KB893406_gene72	2.268e-27	114.0	COG2202@1|root,COG4251@1|root,COG2202@2|Bacteria,COG4251@2|Bacteria,4NE3J@976|Bacteroidetes,47MRF@768503|Cytophagia	976|Bacteroidetes	T	Histidine kinase	-	-	-	-	-	-	-	-	-	-	-	-	CZB,HATPase_c,HisKA,PAS_3,PAS_4,PAS_9
BYD3_k127_5895477_2	1454007.JAUG01000026_gene909	1.284e-54	198.0	COG3358@1|root,COG3358@2|Bacteria,4NNWJ@976|Bacteroidetes,1ITID@117747|Sphingobacteriia	976|Bacteroidetes	S	Protein of unknown function (DUF1684)	-	-	-	ko:K09164	-	-	-	-	ko00000	-	-	-	DUF1684
BYD3_k127_5895477_6	1122179.KB890415_gene1969	3.008e-36	149.0	COG0823@1|root,COG0823@2|Bacteria,4NITC@976|Bacteroidetes,1IZ29@117747|Sphingobacteriia	976|Bacteroidetes	U	Involved in the tonB-independent uptake of proteins	-	-	-	-	-	-	-	-	-	-	-	-	PD40
BYD3_k127_5895477_0	760192.Halhy_4526	1.968e-196	625.0	COG0681@1|root,COG0681@2|Bacteria,4NFTP@976|Bacteroidetes,1IRAK@117747|Sphingobacteriia	976|Bacteroidetes	U	Belongs to the peptidase S26 family	lepB	-	3.4.21.89	ko:K03100	ko02024,ko03060,map02024,map03060	-	-	-	ko00000,ko00001,ko01000,ko01002	-	-	-	Peptidase_S24,Peptidase_S26
BYD3_k127_5895477_1	760192.Halhy_1028	4.765e-149	479.0	COG1239@1|root,COG1239@2|Bacteria,4NF1J@976|Bacteroidetes,1IQK5@117747|Sphingobacteriia	976|Bacteroidetes	H	Sigma-54 interaction domain	chlI	-	6.6.1.1	ko:K03405	ko00860,ko01100,ko01110,map00860,map01100,map01110	-	R03877	RC01012	ko00000,ko00001,ko01000	-	-	-	AAA_5,Sigma54_activat
BYD3_k127_5900137_15	1122179.KB890420_gene2445	7.826e-39	152.0	COG1595@1|root,COG1595@2|Bacteria,4NMIY@976|Bacteroidetes,1IS9P@117747|Sphingobacteriia	976|Bacteroidetes	K	TIGRFAM RNA polymerase sigma factor, sigma-70 family	-	-	-	ko:K03088	-	-	-	-	ko00000,ko03021	-	-	-	Sigma70_r2,Sigma70_r4,Sigma70_r4_2
BYD3_k127_5900137_17	1506583.JQJY01000002_gene1321	1.251e-33	132.0	COG3801@1|root,COG3801@2|Bacteria,4NSK5@976|Bacteroidetes,1IAE8@117743|Flavobacteriia,2NWR1@237|Flavobacterium	976|Bacteroidetes	S	YjbR	-	-	-	-	-	-	-	-	-	-	-	-	YjbR
BYD3_k127_5900137_18	1157632.AQWQ01000003_gene2079	4.023e-29	126.0	COG0500@1|root,COG2226@2|Bacteria	2|Bacteria	Q	methyltransferase	-	-	-	-	-	-	-	-	-	-	-	-	Methyltransf_11,Methyltransf_23,Methyltransf_25
BYD3_k127_5900137_5	1250232.JQNJ01000001_gene1442	5.73e-204	646.0	COG2931@1|root,COG2931@2|Bacteria,4PKJU@976|Bacteroidetes,1IJB7@117743|Flavobacteriia	976|Bacteroidetes	Q	PAP2 superfamily	-	-	-	-	-	-	-	-	-	-	-	-	PAP2
BYD3_k127_5900137_1	761193.Runsl_4914	4.945e-319	983.0	COG0493@1|root,COG1143@1|root,COG0493@2|Bacteria,COG1143@2|Bacteria,4NG9R@976|Bacteroidetes,47KDW@768503|Cytophagia	976|Bacteroidetes	C	Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster	-	-	1.3.1.1	ko:K17722	ko00240,ko00410,ko00770,ko01100,map00240,map00410,map00770,map01100	M00046	R00977,R01414,R11026	RC00072,RC00123	ko00000,ko00001,ko00002,ko01000	-	-	-	Fer4_20,Fer4_7,Pyr_redox_2,Pyr_redox_3
BYD3_k127_5900137_3	1239962.C943_04414	6.535e-278	865.0	COG0674@1|root,COG1014@1|root,COG0674@2|Bacteria,COG1014@2|Bacteria,4NEP3@976|Bacteroidetes,47KM5@768503|Cytophagia	976|Bacteroidetes	C	Pyruvate ferredoxin/flavodoxin oxidoreductase	-	-	1.2.7.11,1.2.7.3	ko:K00174	ko00010,ko00020,ko00620,ko00650,ko00720,ko01100,ko01120,ko01130,ko01200,map00010,map00020,map00620,map00650,map00720,map01100,map01120,map01130,map01200	M00009,M00011,M00173,M00620	R01196,R01197	RC00004,RC02742,RC02833	br01601,ko00000,ko00001,ko00002,ko01000	-	-	-	POR,POR_N
BYD3_k127_5900137_7	1279009.ADICEAN_01742	1.17e-156	500.0	COG1013@1|root,COG1013@2|Bacteria,4NIE0@976|Bacteroidetes,47KXJ@768503|Cytophagia	976|Bacteroidetes	C	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain	-	-	1.2.7.11,1.2.7.3	ko:K00175	ko00010,ko00020,ko00620,ko00650,ko00720,ko01100,ko01120,ko01130,ko01200,map00010,map00020,map00620,map00650,map00720,map01100,map01120,map01130,map01200	M00009,M00011,M00173,M00620	R01196,R01197	RC00004,RC02742,RC02833	br01601,ko00000,ko00001,ko00002,ko01000	-	-	-	TPP_enzyme_C
BYD3_k127_5900137_9	1313421.JHBV01000041_gene3619	3.281e-122	396.0	COG0463@1|root,COG0463@2|Bacteria,4PKIQ@976|Bacteroidetes,1IVMW@117747|Sphingobacteriia	976|Bacteroidetes	M	Glycosyl transferase family 2	-	-	-	-	-	-	-	-	-	-	-	-	Glycos_transf_2
BYD3_k127_5900137_8	760192.Halhy_2712	7.307e-135	439.0	COG0820@1|root,COG0820@2|Bacteria,4NFH5@976|Bacteroidetes,1IQMY@117747|Sphingobacteriia	976|Bacteroidetes	J	Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs	rlmN	GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0006139,GO:0006364,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016740,GO:0016741,GO:0022613,GO:0030488,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0070475,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140101,GO:0140102,GO:1901360	2.1.1.192	ko:K06941	-	-	-	-	ko00000,ko01000,ko03009	-	-	-	Fer4_14,Radical_SAM
BYD3_k127_5900137_14	1443665.JACA01000007_gene234	4.692e-59	211.0	COG4430@1|root,COG4430@2|Bacteria,4NKNI@976|Bacteroidetes,1I11I@117743|Flavobacteriia,2YI5V@290174|Aquimarina	976|Bacteroidetes	S	Bacteriocin-protection, YdeI or OmpD-Associated	-	-	-	-	-	-	-	-	-	-	-	-	DUF1801,OmdA
BYD3_k127_5900137_13	411154.GFO_0302	1.205e-69	243.0	COG3000@1|root,COG3000@2|Bacteria,4NMV7@976|Bacteroidetes,1I0S1@117743|Flavobacteriia	976|Bacteroidetes	I	Fatty acid hydroxylase	-	-	-	-	-	-	-	-	-	-	-	-	FA_hydroxylase
BYD3_k127_5900137_10	1234364.AMSF01000095_gene2565	5.868e-95	317.0	COG0614@1|root,COG0614@2|Bacteria,1PK1A@1224|Proteobacteria,1RRDK@1236|Gammaproteobacteria,1X3UZ@135614|Xanthomonadales	135614|Xanthomonadales	P	ABC transporter substrate-binding protein	-	-	-	ko:K02016	ko02010,map02010	M00240	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.14	-	-	Peripla_BP_2
BYD3_k127_5900137_19	1237149.C900_04850	1.39e-25	115.0	COG2062@1|root,COG2062@2|Bacteria,4PMDV@976|Bacteroidetes,47Y2D@768503|Cytophagia	976|Bacteroidetes	T	Phosphoglycerate mutase family	-	-	-	-	-	-	-	-	-	-	-	-	His_Phos_1
BYD3_k127_5900137_11	1122176.KB903619_gene5295	9.537e-79	269.0	2CISN@1|root,2Z7MB@2|Bacteria,4NFJX@976|Bacteroidetes,1ISGE@117747|Sphingobacteriia	976|Bacteroidetes	S	Gluconate 2-dehydrogenase subunit 3	-	-	-	-	-	-	-	-	-	-	-	-	Gluconate_2-dh3
BYD3_k127_5900137_2	867900.Celly_2588	2.387e-314	968.0	COG2303@1|root,COG2303@2|Bacteria,4NEHP@976|Bacteroidetes,1HXAS@117743|Flavobacteriia,1F7RR@104264|Cellulophaga	976|Bacteroidetes	E	COGs COG2303 Choline dehydrogenase and related flavoprotein	-	-	-	-	-	-	-	-	-	-	-	-	FAD_binding_2,GMC_oxred_C,GMC_oxred_N
BYD3_k127_5900137_24	1469557.JSWF01000014_gene2417	1.659e-09	73.0	2DBH5@1|root,2Z97Q@2|Bacteria,4NK7F@976|Bacteroidetes,1I14F@117743|Flavobacteriia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_5900137_6	1492737.FEM08_12750	2.007e-195	670.0	COG1361@1|root,COG2304@1|root,COG3210@1|root,COG1361@2|Bacteria,COG2304@2|Bacteria,COG3210@2|Bacteria,4NMB8@976|Bacteroidetes,1IJKA@117743|Flavobacteriia,2P0T7@237|Flavobacterium	976|Bacteroidetes	M	Pfam C-terminal domain of CHU protein family	-	-	-	-	-	-	-	-	-	-	-	-	Big_3_3,CHU_C,Calx-beta,DUF11,HYR,SdrD_B
BYD3_k127_5900137_16	1286632.P278_00790	6.097e-37	143.0	COG3070@1|root,COG3070@2|Bacteria,4NSGZ@976|Bacteroidetes,1I4CE@117743|Flavobacteriia	976|Bacteroidetes	K	TfoX N-terminal domain	-	-	-	-	-	-	-	-	-	-	-	-	TfoX_N
BYD3_k127_5900137_4	760192.Halhy_3454	6.776e-263	820.0	COG0423@1|root,COG0423@2|Bacteria,4NE1C@976|Bacteroidetes,1IPE0@117747|Sphingobacteriia	976|Bacteroidetes	J	Catalyzes the attachment of glycine to tRNA(Gly)	glyQS	-	6.1.1.14	ko:K01880	ko00970,map00970	M00359,M00360	R03654	RC00055,RC00523	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029	-	-	-	HGTP_anticodon,tRNA-synt_2b
BYD3_k127_5900137_23	1380600.AUYN01000009_gene1578	1.604e-11	70.0	2DQ1A@1|root,32UNA@2|Bacteria,4NT2M@976|Bacteroidetes,1I4EA@117743|Flavobacteriia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	DUF1761
BYD3_k127_5900137_12	760192.Halhy_1377	1.079e-73	267.0	COG3428@1|root,COG3428@2|Bacteria,4NJ1E@976|Bacteroidetes,1IZ3X@117747|Sphingobacteriia	976|Bacteroidetes	S	Bacterial PH domain	-	-	-	ko:K08981	-	-	-	-	ko00000	-	-	-	bPH_2
BYD3_k127_5900137_21	319236.JCM19294_832	1.378e-24	109.0	COG3402@1|root,COG3402@2|Bacteria,4NUVJ@976|Bacteroidetes,1I2NQ@117743|Flavobacteriia,3HK9Q@363408|Nonlabens	976|Bacteroidetes	S	Bacterial PH domain	-	-	-	ko:K09167	-	-	-	-	ko00000	-	-	-	bPH_2
BYD3_k127_5900137_0	760192.Halhy_3470	0.0	1303.0	COG1197@1|root,COG1197@2|Bacteria,4NEPA@976|Bacteroidetes,1IPC5@117747|Sphingobacteriia	976|Bacteroidetes	L	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site	mfd	-	-	ko:K03723	ko03420,map03420	-	-	-	ko00000,ko00001,ko01000,ko03400	-	-	-	CarD_CdnL_TRCF,DEAD,Helicase_C,TRCF
BYD3_k127_5982123_4	269798.CHU_0427	9.993e-21	104.0	COG3291@1|root,COG3291@2|Bacteria,4NJHV@976|Bacteroidetes,47R0V@768503|Cytophagia	976|Bacteroidetes	S	Fibronectin type 3 domain	-	-	-	-	-	-	-	-	-	-	-	-	fn3
BYD3_k127_5982123_1	485918.Cpin_2220	1.81e-54	201.0	COG2890@1|root,COG2890@2|Bacteria,4NDZB@976|Bacteroidetes,1IRSV@117747|Sphingobacteriia	976|Bacteroidetes	J	Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif	prmC	GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0008152,GO:0008168,GO:0008757,GO:0016740,GO:0016741,GO:0032259,GO:0044424,GO:0044444,GO:0044464	2.1.1.297	ko:K02493	-	-	R10806	RC00003,RC03279	ko00000,ko01000,ko03012	-	-	-	MTS
BYD3_k127_5982123_2	1168034.FH5T_05145	5.37e-39	161.0	COG2244@1|root,COG2244@2|Bacteria,4NQ1X@976|Bacteroidetes,2FTG2@200643|Bacteroidia	976|Bacteroidetes	S	Polysaccharide biosynthesis protein	-	-	-	-	-	-	-	-	-	-	-	-	Polysacc_synt,Polysacc_synt_3
BYD3_k127_5982123_3	886377.Murru_0735	1.078e-35	141.0	COG0295@1|root,COG0295@2|Bacteria,4NQED@976|Bacteroidetes,1I1A3@117743|Flavobacteriia	976|Bacteroidetes	F	This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis	cdd	-	3.5.4.5	ko:K01489	ko00240,ko00983,ko01100,map00240,map00983,map01100	-	R01878,R02485,R08221	RC00074,RC00514	ko00000,ko00001,ko01000	-	-	-	dCMP_cyt_deam_1
BYD3_k127_5982123_0	1122179.KB890446_gene388	1.881e-61	220.0	COG1212@1|root,COG1212@2|Bacteria,4NG4B@976|Bacteroidetes,1IQQ6@117747|Sphingobacteriia	976|Bacteroidetes	M	Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria	kdsB	-	2.7.7.38	ko:K00979	ko00540,ko01100,map00540,map01100	M00063	R03351,R11396	RC00152,RC00910	ko00000,ko00001,ko00002,ko01000,ko01005	-	-	-	CTP_transf_3
BYD3_k127_5982123_5	869213.JCM21142_41848	4.36e-06	52.0	COG1388@1|root,COG1388@2|Bacteria,4NG96@976|Bacteroidetes	976|Bacteroidetes	M	LysM domain	lysM	-	-	-	-	-	-	-	-	-	-	-	ANF_receptor,LysM,Peripla_BP_6
BYD3_k127_5988691_0	1122176.KB903619_gene5365	2.293e-92	316.0	COG0526@1|root,COG0526@2|Bacteria,4NEX3@976|Bacteroidetes	976|Bacteroidetes	CO	alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen	ccmG	-	-	-	-	-	-	-	-	-	-	-	AhpC-TSA,DUF4369
BYD3_k127_5988691_1	1453500.AT05_00600	2.036e-80	274.0	COG0046@1|root,COG0046@2|Bacteria,4NETY@976|Bacteroidetes,1HYI9@117743|Flavobacteriia	976|Bacteroidetes	F	Phosphoribosylformylglycinamidine synthase involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate	purL	-	6.3.5.3	ko:K01952	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	M00048	R04463	RC00010,RC01160	ko00000,ko00001,ko00002,ko01000	-	-	-	AIRS,AIRS_C,GATase_5
BYD3_k127_599973_3	926549.KI421517_gene1635	8.71e-45	164.0	COG2351@1|root,COG2351@2|Bacteria,4NSS9@976|Bacteroidetes,47R91@768503|Cytophagia	976|Bacteroidetes	S	Transthyretin	-	-	3.5.2.17	ko:K07127	ko00230,ko01100,ko01120,map00230,map01100,map01120	M00546	R06601	RC03393	ko00000,ko00001,ko00002,ko01000,ko02000	9.B.35.1.2,9.B.35.2	-	-	Transthyretin
BYD3_k127_599973_1	700598.Niako_0438	4.327e-49	179.0	COG3195@1|root,COG3195@2|Bacteria,4NNR4@976|Bacteroidetes,1IY0J@117747|Sphingobacteriia	976|Bacteroidetes	S	TIGRFAM OHCU decarboxylase	-	-	4.1.1.97	ko:K16840	ko00230,ko01100,ko01120,map00230,map01100,map01120	M00546	R06604	RC01551	ko00000,ko00001,ko00002,ko01000	-	-	-	OHCU_decarbox
BYD3_k127_599973_0	1313421.JHBV01000041_gene3670	8.135e-133	431.0	COG4266@1|root,COG4266@2|Bacteria,4P04R@976|Bacteroidetes	976|Bacteroidetes	F	Allantoicase repeat	-	-	-	-	-	-	-	-	-	-	-	-	Allantoicase
BYD3_k127_599973_2	700598.Niako_0441	8.354e-47	170.0	COG0044@1|root,COG0044@2|Bacteria,4NIKH@976|Bacteroidetes,1IQXF@117747|Sphingobacteriia	976|Bacteroidetes	F	TIGRFAM allantoinase	-	-	3.5.2.5	ko:K01466	ko00230,ko01100,ko01120,map00230,map01100,map01120	M00546	R02425	RC00680	ko00000,ko00001,ko00002,ko01000	-	-	-	Amidohydro_1
BYD3_k127_6008636_3	760192.Halhy_2840	5.278e-11	66.0	COG3027@1|root,COG3027@2|Bacteria,4NSA5@976|Bacteroidetes,1ITBU@117747|Sphingobacteriia	976|Bacteroidetes	D	Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division	zapA	-	-	ko:K09888	-	-	-	-	ko00000,ko03036	-	-	-	ZapA
BYD3_k127_6008636_0	760192.Halhy_2841	1.21e-236	743.0	COG1418@1|root,COG4372@1|root,COG1418@2|Bacteria,COG4372@2|Bacteria,4NE3V@976|Bacteroidetes,1IQZ1@117747|Sphingobacteriia	976|Bacteroidetes	M	Endoribonuclease that initiates mRNA decay	rny	-	-	ko:K18682	ko03018,map03018	-	-	-	ko00000,ko00001,ko01000,ko03019	-	-	-	DUF3552,HD,KH_1
BYD3_k127_6008636_2	1122176.KB903556_gene4107	1.169e-24	120.0	COG3291@1|root,COG3291@2|Bacteria	2|Bacteria	S	metallopeptidase activity	-	-	-	-	-	-	-	-	-	-	-	-	CHU_C,PKD,SprB
BYD3_k127_6008636_1	1279009.ADICEAN_01177	1.113e-71	265.0	COG3209@1|root,COG4932@1|root,COG3209@2|Bacteria,COG4932@2|Bacteria,4PKBQ@976|Bacteroidetes,47XXU@768503|Cytophagia	976|Bacteroidetes	M	SprB repeat	-	-	-	-	-	-	-	-	-	-	-	-	CHU_C,SdrD_B,SprB
BYD3_k127_6009988_0	926562.Oweho_2291	7.854e-124	435.0	COG2931@1|root,COG4222@1|root,COG2931@2|Bacteria,COG4222@2|Bacteria,4NKF1@976|Bacteroidetes,1II60@117743|Flavobacteriia,2PBH9@246874|Cryomorphaceae	976|Bacteroidetes	Q	A domain in the BMP inhibitor chordin and in microbial proteins.	-	-	-	-	-	-	-	-	-	-	-	-	CHRD,SusE
BYD3_k127_6009988_5	1005048.CFU_2378	5.218e-13	83.0	COG2335@1|root,COG2335@2|Bacteria,1N4AV@1224|Proteobacteria,2VU44@28216|Betaproteobacteria,477K6@75682|Oxalobacteraceae	28216|Betaproteobacteria	M	A domain in the BMP inhibitor chordin and in microbial proteins.	-	-	-	-	-	-	-	-	-	-	-	-	CHRD
BYD3_k127_6009988_3	203124.Tery_2055	4.937e-24	120.0	COG2931@1|root,COG2931@2|Bacteria,1GDW0@1117|Cyanobacteria	1117|Cyanobacteria	Q	hemolysin-type calcium-binding region	-	-	-	-	-	-	-	-	-	-	-	-	HemolysinCabind,Lipase
BYD3_k127_6009988_6	525257.HMPREF0204_11683	3.043e-05	55.0	COG4733@1|root,COG4733@2|Bacteria,4PKYS@976|Bacteroidetes,1IJHR@117743|Flavobacteriia,3ZUN6@59732|Chryseobacterium	976|Bacteroidetes	O	Metallo-peptidase family M12B Reprolysin-like	-	-	-	-	-	-	-	-	-	-	-	-	FTP,MAM,Peptidase_M36,Reprolysin_4,fn3
BYD3_k127_6009988_1	1122179.KB890425_gene3336	5.481e-111	371.0	COG0682@1|root,COG0682@2|Bacteria,4NGSG@976|Bacteroidetes,1INRB@117747|Sphingobacteriia	976|Bacteroidetes	M	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins	-	-	-	ko:K13292	-	-	-	-	ko00000,ko01000	-	-	-	LGT
BYD3_k127_6009988_2	760192.Halhy_1949	2.793e-102	335.0	COG0060@1|root,COG0060@2|Bacteria,4NEYT@976|Bacteroidetes,1IPPT@117747|Sphingobacteriia	976|Bacteroidetes	J	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)	ileS	-	6.1.1.5	ko:K01870	ko00970,map00970	M00359,M00360	R03656	RC00055,RC00523	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	-	-	-	Anticodon_1,tRNA-synt_1
BYD3_k127_6012192_2	435591.BDI_2812	1.717e-54	199.0	COG1215@1|root,COG1215@2|Bacteria,4NQWJ@976|Bacteroidetes,2FQJ6@200643|Bacteroidia,230NM@171551|Porphyromonadaceae	976|Bacteroidetes	M	Glycosyl transferase family 2	-	-	-	-	-	-	-	-	-	-	-	-	Glycos_transf_2
BYD3_k127_6012192_0	760192.Halhy_1865	5.408e-273	860.0	COG0210@1|root,COG0210@2|Bacteria,4NDWN@976|Bacteroidetes,1IP3C@117747|Sphingobacteriia	976|Bacteroidetes	L	DNA helicase	pcrA	-	3.6.4.12	ko:K03657	ko03420,ko03430,map03420,map03430	-	-	-	ko00000,ko00001,ko01000,ko03400	-	-	-	UvrD-helicase,UvrD_C
BYD3_k127_6012192_1	760192.Halhy_4134	5.775e-117	387.0	COG1600@1|root,COG1600@2|Bacteria,4NFCJ@976|Bacteroidetes,1IP9F@117747|Sphingobacteriia	976|Bacteroidetes	C	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)	queG	-	1.17.99.6	ko:K18979	-	-	-	-	ko00000,ko01000,ko03016	-	-	-	DUF1730,Fer4_16
BYD3_k127_6070084_0	1123248.KB893348_gene80	2.896e-313	972.0	COG0370@1|root,COG0370@2|Bacteria,4NEII@976|Bacteroidetes,1IPAK@117747|Sphingobacteriia	976|Bacteroidetes	P	transporter of a GTP-driven Fe(2 ) uptake system	feoB	-	-	ko:K04759	-	-	-	-	ko00000,ko02000	9.A.8.1	-	-	FeoA,FeoB_C,FeoB_N,Gate
BYD3_k127_6070084_1	700598.Niako_6332	2.77e-25	106.0	COG2367@1|root,COG2367@2|Bacteria,4NDYP@976|Bacteroidetes,1INNE@117747|Sphingobacteriia	976|Bacteroidetes	V	Beta-lactamase enzyme family	-	-	3.5.2.6	ko:K17836	ko00311,ko01130,ko01501,map00311,map01130,map01501	M00627,M00628	R06363	RC01499	ko00000,ko00001,ko00002,ko01000,ko01504	-	-	-	Beta-lactamase2
BYD3_k127_6072266_4	1268072.PSAB_08730	2.532e-23	107.0	2AKFW@1|root,31B7M@2|Bacteria,1TZN5@1239|Firmicutes,4I8X9@91061|Bacilli,270NP@186822|Paenibacillaceae	91061|Bacilli	S	Protein of unknown function (DUF998)	-	-	-	-	-	-	-	-	-	-	-	-	DUF998
BYD3_k127_6072266_0	1189612.A33Q_1637	5.717e-52	188.0	COG2764@1|root,COG3832@1|root,COG2764@2|Bacteria,COG3832@2|Bacteria,4NFVK@976|Bacteroidetes,47MD3@768503|Cytophagia	976|Bacteroidetes	S	Activator of Hsp90 ATPase homolog 1-like protein	-	-	-	-	-	-	-	-	-	-	-	-	3-dmu-9_3-mt,AHSA1
BYD3_k127_6072266_1	1185876.BN8_04298	1.617e-44	163.0	COG0640@1|root,COG0640@2|Bacteria,4NQCU@976|Bacteroidetes,47QH4@768503|Cytophagia	976|Bacteroidetes	K	helix_turn_helix, Arsenical Resistance Operon Repressor	-	-	-	-	-	-	-	-	-	-	-	-	HTH_20,HTH_5
BYD3_k127_6072266_2	153721.MYP_880	1.41e-40	156.0	COG0406@1|root,COG0406@2|Bacteria,4P553@976|Bacteroidetes,47W79@768503|Cytophagia	976|Bacteroidetes	G	alpha-ribazole phosphatase activity	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_6072266_3	1469557.JSWF01000024_gene1778	6.41e-40	151.0	COG1228@1|root,COG4538@1|root,COG1228@2|Bacteria,COG4538@2|Bacteria,4NGGD@976|Bacteroidetes,1I07B@117743|Flavobacteriia	976|Bacteroidetes	Q	amidohydrolase	-	-	-	-	-	-	-	-	-	-	-	-	Amidohydro_1,SnoaL_2
BYD3_k127_608033_0	261292.Nit79A3_0026	0.0	2481.0	COG3459@1|root,COG3459@2|Bacteria,1MVNX@1224|Proteobacteria,2VKDG@28216|Betaproteobacteria,371PE@32003|Nitrosomonadales	28216|Betaproteobacteria	G	Glycosyl hydrolase 36 superfamily, catalytic domain	-	-	-	-	-	-	-	-	-	-	-	-	Glyco_hydro_36,Glyco_transf_36,Glycoamylase
BYD3_k127_608033_1	1122176.KB903548_gene1163	5.992e-165	526.0	COG0517@1|root,COG0517@2|Bacteria,4NGW0@976|Bacteroidetes,1IV0R@117747|Sphingobacteriia	976|Bacteroidetes	S	Domain in cystathionine beta-synthase and other proteins.	-	-	-	-	-	-	-	-	-	-	-	-	CBS,GCS2
BYD3_k127_6085246_0	471854.Dfer_2718	4.374e-219	705.0	COG4206@1|root,COG4773@1|root,COG4206@2|Bacteria,COG4773@2|Bacteria,4NZWU@976|Bacteroidetes,47Y7K@768503|Cytophagia	976|Bacteroidetes	H	TonB dependent receptor	-	-	-	-	-	-	-	-	-	-	-	-	CarbopepD_reg_2,Plug,TonB_dep_Rec
BYD3_k127_6085246_1	760192.Halhy_4556	7.615e-97	322.0	COG0854@1|root,COG0854@2|Bacteria,4NF4Z@976|Bacteroidetes,1IQ0U@117747|Sphingobacteriia	976|Bacteroidetes	H	Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate	pdxJ	GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006725,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0008614,GO:0008615,GO:0009058,GO:0009110,GO:0009987,GO:0016740,GO:0016769,GO:0017144,GO:0018130,GO:0019438,GO:0033856,GO:0034641,GO:0042364,GO:0042816,GO:0042819,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:0072524,GO:0072525,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901615,GO:1901617	2.6.99.2	ko:K03474	ko00750,ko01100,map00750,map01100	M00124	R05838	RC01476	ko00000,ko00001,ko00002,ko01000	-	-	-	PdxJ
BYD3_k127_6085246_2	760192.Halhy_4555	8.394e-48	183.0	COG1266@1|root,COG1266@2|Bacteria,4NHE1@976|Bacteroidetes,1IT2K@117747|Sphingobacteriia	976|Bacteroidetes	S	CAAX amino terminal protease family	-	-	-	ko:K07052	-	-	-	-	ko00000	-	-	-	Abi
BYD3_k127_6085246_3	926549.KI421517_gene846	4.283e-36	147.0	COG4589@1|root,COG4589@2|Bacteria,4NIPM@976|Bacteroidetes,47KPM@768503|Cytophagia	976|Bacteroidetes	S	Belongs to the CDS family	cdsA	-	2.7.7.41	ko:K00981	ko00564,ko01100,ko01110,ko04070,map00564,map01100,map01110,map04070	M00093	R01799	RC00002	ko00000,ko00001,ko00002,ko01000	-	-	-	CTP_transf_1
BYD3_k127_6089991_2	760192.Halhy_6085	1.614e-20	94.0	COG2937@1|root,COG2937@2|Bacteria,4NK5H@976|Bacteroidetes	976|Bacteroidetes	I	Belongs to the GPAT DAPAT family	plsB	-	2.3.1.15	ko:K00631	ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110	M00089	R00851,R09380	RC00004,RC00039,RC00041	ko00000,ko00001,ko00002,ko01000,ko01004	-	-	-	Acyltransferase
BYD3_k127_6089991_1	926549.KI421517_gene2900	3.209e-60	214.0	COG0218@1|root,COG0218@2|Bacteria,4NEA9@976|Bacteroidetes,47P6H@768503|Cytophagia	976|Bacteroidetes	D	Necessary for normal cell division and for the maintenance of normal septation	engB	GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464	-	ko:K03978	-	-	-	-	ko00000,ko03036	-	-	-	MMR_HSR1
BYD3_k127_6089991_0	1122176.KB903536_gene1794	2.229e-62	229.0	COG1361@1|root,COG2356@1|root,COG3291@1|root,COG1361@2|Bacteria,COG2356@2|Bacteria,COG3291@2|Bacteria,4PM78@976|Bacteroidetes	976|Bacteroidetes	M	Conserved repeat domain	-	-	-	-	-	-	-	-	-	-	-	-	CARDB
BYD3_k127_6089991_3	153721.MYP_3264	0.0004153	49.0	COG1572@1|root,COG3210@1|root,COG3291@1|root,COG1572@2|Bacteria,COG3210@2|Bacteria,COG3291@2|Bacteria,4NJQN@976|Bacteroidetes,47QVQ@768503|Cytophagia	976|Bacteroidetes	DZ	Pkd domain	-	-	-	-	-	-	-	-	-	-	-	-	Beta_helix,CHU_C,IgGFc_binding,PKD,SprB,fn3
BYD3_k127_6109249_0	1046627.BZARG_2330	3.581e-316	995.0	COG0574@1|root,COG0574@2|Bacteria,4NH4R@976|Bacteroidetes,1HWKY@117743|Flavobacteriia	976|Bacteroidetes	G	Pyruvate phosphate dikinase	-	-	2.7.9.2	ko:K01007	ko00620,ko00680,ko00720,ko01100,ko01120,ko01200,map00620,map00680,map00720,map01100,map01120,map01200	M00173,M00374	R00199	RC00002,RC00015	ko00000,ko00001,ko00002,ko01000	-	-	-	PEP-utilizers,PPDK_N
BYD3_k127_6109249_2	1121011.AUCB01000009_gene1907	1.627e-154	498.0	COG2367@1|root,COG2367@2|Bacteria,4NHF9@976|Bacteroidetes,1HZHM@117743|Flavobacteriia,23GV7@178469|Arenibacter	976|Bacteroidetes	V	Beta-lactamase enzyme family	-	-	-	-	-	-	-	-	-	-	-	-	Beta-lactamase2
BYD3_k127_6109249_1	1121011.AUCB01000009_gene1906	5.903e-180	597.0	COG3202@1|root,COG3202@2|Bacteria,4NIB2@976|Bacteroidetes,1HWNK@117743|Flavobacteriia,23G7U@178469|Arenibacter	976|Bacteroidetes	C	TLC ATP/ADP transporter	-	-	-	ko:K03301	-	-	-	-	ko00000	2.A.12	-	-	TLC,cNMP_binding
BYD3_k127_6110301_4	1237149.C900_02542	3.303e-72	261.0	COG1215@1|root,COG1215@2|Bacteria,4NMSY@976|Bacteroidetes,47NMB@768503|Cytophagia	976|Bacteroidetes	M	Glycosyl transferase family 2	-	-	-	-	-	-	-	-	-	-	-	-	Glyco_tranf_2_3,Glycos_transf_2
BYD3_k127_6110301_8	497965.Cyan7822_4087	5.469e-43	177.0	COG2246@1|root,COG2246@2|Bacteria	2|Bacteria	S	polysaccharide biosynthetic process	-	-	2.3.1.51,2.4.1.83	ko:K00655,ko:K00721	ko00510,ko00561,ko00564,ko01100,ko01110,map00510,map00561,map00564,map01100,map01110	M00089	R01009,R02241,R09381	RC00004,RC00005,RC00037,RC00039	ko00000,ko00001,ko00002,ko01000,ko01003,ko01004	-	GT2	-	DUF4129,Glycos_transf_2,GtrA,Transglut_core
BYD3_k127_6110301_5	1122176.KB903554_gene3833	6.358e-68	233.0	COG0105@1|root,COG0105@2|Bacteria,4NM5B@976|Bacteroidetes,1ISC1@117747|Sphingobacteriia	976|Bacteroidetes	F	Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate	ndk	-	2.7.4.6	ko:K00940	ko00230,ko00240,ko00983,ko01100,ko01110,ko01130,ko04016,map00230,map00240,map00983,map01100,map01110,map01130,map04016	M00049,M00050,M00052,M00053	R00124,R00139,R00156,R00330,R00570,R00722,R01137,R01857,R02093,R02326,R02331,R03530,R11894,R11895	RC00002	ko00000,ko00001,ko00002,ko01000,ko04131	-	-	-	NDK
BYD3_k127_6110301_2	1122176.KB903554_gene3832	5.889e-104	347.0	COG0618@1|root,COG0618@2|Bacteria,4NEXE@976|Bacteroidetes,1IPG0@117747|Sphingobacteriia	976|Bacteroidetes	S	phosphoesterase RecJ domain protein	nrnA	-	3.1.13.3,3.1.3.7	ko:K06881	ko00920,ko01100,ko01120,map00920,map01100,map01120	-	R00188,R00508	RC00078	ko00000,ko00001,ko01000,ko03400	-	-	-	DHH,DHHA1
BYD3_k127_6110301_9	760192.Halhy_0348	3.891e-40	160.0	COG0545@1|root,COG0545@2|Bacteria,4NDW4@976|Bacteroidetes,1IQ1U@117747|Sphingobacteriia	976|Bacteroidetes	O	PFAM FKBP-type peptidyl-prolyl cis-trans isomerase	ppiB	-	5.2.1.8	ko:K01802,ko:K03767,ko:K03772	ko01503,ko04217,map01503,map04217	-	-	-	ko00000,ko00001,ko01000,ko03110,ko04147	-	-	-	FKBP_C,Pro_isomerase
BYD3_k127_6110301_0	760192.Halhy_0347	1.081e-157	503.0	COG1186@1|root,COG1186@2|Bacteria,4NEN1@976|Bacteroidetes,1IP7G@117747|Sphingobacteriia	976|Bacteroidetes	J	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA	prfB	-	-	ko:K02836	-	-	-	-	ko00000,ko03012	-	-	-	PCRF,RF-1
BYD3_k127_6110301_10	693661.Arcve_1699	1.948e-14	77.0	COG1324@1|root,arCOG04231@2157|Archaea,2XYPN@28890|Euryarchaeota,246D8@183980|Archaeoglobi	183980|Archaeoglobi	P	PFAM CutA1 divalent ion tolerance protein	-	-	-	ko:K03926	-	-	-	-	ko00000	-	-	-	CutA1
BYD3_k127_6110301_1	1122176.KB903538_gene1461	8.747e-142	458.0	COG0205@1|root,COG0205@2|Bacteria,4NF8F@976|Bacteroidetes,1IPR9@117747|Sphingobacteriia	976|Bacteroidetes	G	Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis	pfkA	-	2.7.1.11	ko:K00850	ko00010,ko00030,ko00051,ko00052,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko03018,ko04152,ko05230,map00010,map00030,map00051,map00052,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map03018,map04152,map05230	M00001,M00345	R00756,R03236,R03237,R03238,R03239,R04779	RC00002,RC00017	ko00000,ko00001,ko00002,ko01000,ko01009,ko03019	-	-	-	PFK
BYD3_k127_6110301_7	1313421.JHBV01000030_gene2203	6.64e-45	175.0	COG2971@1|root,COG2971@2|Bacteria,4NEV4@976|Bacteroidetes,1IPXV@117747|Sphingobacteriia	976|Bacteroidetes	G	N-acetylglucosamine kinase	-	-	-	-	-	-	-	-	-	-	-	-	BcrAD_BadFG
BYD3_k127_6110301_6	717231.Flexsi_0881	5.836e-52	189.0	COG1704@1|root,COG1704@2|Bacteria,2GFE4@200930|Deferribacteres	200930|Deferribacteres	S	LemA family	-	-	-	ko:K03744	-	-	-	-	ko00000	-	-	-	LemA
BYD3_k127_6110301_3	639282.DEFDS_1130	1.894e-83	297.0	COG4907@1|root,COG4907@2|Bacteria,2GF9W@200930|Deferribacteres	200930|Deferribacteres	S	Predicted membrane protein (DUF2207)	-	-	-	-	-	-	-	-	-	-	-	-	DUF2207
BYD3_k127_6116054_2	649349.Lbys_0715	1.322e-56	203.0	COG0793@1|root,COG0793@2|Bacteria,4NFEN@976|Bacteroidetes,47PTG@768503|Cytophagia	976|Bacteroidetes	M	PFAM Peptidase family S41	-	-	-	-	-	-	-	-	-	-	-	-	Peptidase_S41,Tricorn_C1
BYD3_k127_6116054_0	760192.Halhy_1327	3.154e-135	445.0	2DBAQ@1|root,2Z848@2|Bacteria,4NFR9@976|Bacteroidetes,1INQ0@117747|Sphingobacteriia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_6116054_4	1121007.AUML01000007_gene2973	1.866e-34	139.0	COG2353@1|root,COG2353@2|Bacteria,4NQKY@976|Bacteroidetes,1I2Z5@117743|Flavobacteriia	976|Bacteroidetes	S	Belongs to the UPF0312 family	-	-	-	-	-	-	-	-	-	-	-	-	YceI
BYD3_k127_6116054_5	991.IW20_23880	5.501e-12	69.0	COG4980@1|root,COG4980@2|Bacteria,4NU4D@976|Bacteroidetes,1I4FT@117743|Flavobacteriia,2NXGH@237|Flavobacterium	976|Bacteroidetes	S	YtxH-like protein	-	-	-	-	-	-	-	-	-	-	-	-	YtxH
BYD3_k127_6116054_6	376686.Fjoh_2311	3.617e-07	58.0	2EBJZ@1|root,335KD@2|Bacteria,4NWP2@976|Bacteroidetes,1IBI0@117743|Flavobacteriia,2NWNQ@237|Flavobacterium	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_6116054_7	1123248.KB893348_gene131	3.74e-06	53.0	2EC34@1|root,33623@2|Bacteria,4NVW7@976|Bacteroidetes,1IZR6@117747|Sphingobacteriia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	Phage_holin_3_6
BYD3_k127_6116054_1	1185876.BN8_06454	8.673e-60	218.0	COG5263@1|root,COG5263@2|Bacteria,4NJ6B@976|Bacteroidetes,47PRU@768503|Cytophagia	976|Bacteroidetes	KLT	WG containing repeat	-	-	-	-	-	-	-	-	-	-	-	-	WG_beta_rep
BYD3_k127_6116396_2	1122176.KB903540_gene17	2.074e-46	182.0	2BV6Z@1|root,32QKE@2|Bacteria,4PCAH@976|Bacteroidetes,1IZE7@117747|Sphingobacteriia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_6116396_0	1122176.KB903542_gene336	2.217e-211	672.0	COG3404@1|root,COG3643@1|root,COG3404@2|Bacteria,COG3643@2|Bacteria,4NFE3@976|Bacteroidetes	976|Bacteroidetes	E	Glutamate formimidoyltransferase	ftcD	-	2.1.2.5,4.3.1.4	ko:K00603,ko:K13990	ko00340,ko00670,ko01100,map00340,map00670,map01100	-	R02287,R02302,R03189	RC00165,RC00221,RC00223,RC00688,RC00870	ko00000,ko00001,ko01000,ko03036,ko04147	-	-	-	FTCD,FTCD_C,FTCD_N
BYD3_k127_6116396_1	1453500.AT05_08740	6.36e-48	173.0	COG0663@1|root,COG0663@2|Bacteria,4NG6R@976|Bacteroidetes,1HYG2@117743|Flavobacteriia	976|Bacteroidetes	S	isoleucine patch superfamily	dapH	-	-	-	-	-	-	-	-	-	-	-	Hexapep
BYD3_k127_6135213_3	313596.RB2501_10432	1.056e-13	76.0	COG2885@1|root,COG2885@2|Bacteria,4NKCW@976|Bacteroidetes,1HXSH@117743|Flavobacteriia	976|Bacteroidetes	M	PFAM Outer membrane protein, OmpA MotB, C-terminal	-	-	-	-	-	-	-	-	-	-	-	-	OmpA
BYD3_k127_6135213_1	926562.Oweho_0839	6.843e-27	126.0	COG2849@1|root,COG2849@2|Bacteria,4NW92@976|Bacteroidetes,1IKDQ@117743|Flavobacteriia,2PAPB@246874|Cryomorphaceae	976|Bacteroidetes	S	repeat protein	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_6138725_0	929703.KE386491_gene3486	4.406e-158	503.0	COG0649@1|root,COG0649@2|Bacteria,4NF02@976|Bacteroidetes,47KBK@768503|Cytophagia	976|Bacteroidetes	C	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient	nuoD	-	1.6.5.3	ko:K00333	ko00190,ko01100,map00190,map01100	M00144	R11945	RC00061	ko00000,ko00001,ko00002,ko01000	3.D.1	-	-	Complex1_49kDa
BYD3_k127_6138725_2	760192.Halhy_0318	2.528e-54	196.0	COG0852@1|root,COG0852@2|Bacteria,4NPZH@976|Bacteroidetes,1ISEW@117747|Sphingobacteriia	976|Bacteroidetes	C	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient	nuoC	-	1.6.5.3	ko:K00332	ko00190,ko01100,map00190,map01100	M00144	R11945	RC00061	ko00000,ko00001,ko00002,ko01000	3.D.1	-	-	Complex1_30kDa
BYD3_k127_6138725_1	760192.Halhy_0317	2.203e-95	314.0	COG0377@1|root,COG0377@2|Bacteria,4NFKT@976|Bacteroidetes,1INQ8@117747|Sphingobacteriia	976|Bacteroidetes	C	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient	nuoB	-	1.6.5.3	ko:K00331	ko00190,ko01100,map00190,map01100	M00144	R11945	RC00061	ko00000,ko00001,ko00002,ko01000	3.D.1	-	-	Oxidored_q6
BYD3_k127_6138725_4	468059.AUHA01000002_gene1083	3.264e-43	160.0	COG0838@1|root,COG0838@2|Bacteria,4NQJB@976|Bacteroidetes,1ISVI@117747|Sphingobacteriia	976|Bacteroidetes	C	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient	nuoA	-	1.6.5.3	ko:K00330	ko00190,ko01100,map00190,map01100	M00144	R11945	RC00061	ko00000,ko00001,ko00002,ko01000	3.D.1	-	-	Oxidored_q4
BYD3_k127_6138725_5	517418.Ctha_1289	1.644e-16	84.0	COG1470@1|root,COG1629@1|root,COG1470@2|Bacteria,COG4771@2|Bacteria,1FDET@1090|Chlorobi	1090|Chlorobi	P	TonB-dependent receptor plug	-	-	-	ko:K02014	-	-	-	-	ko00000,ko02000	1.B.14	-	-	CarbopepD_reg_2,Plug,TonB_dep_Rec
BYD3_k127_6138725_3	319225.Plut_0256	3.653e-45	182.0	COG1629@1|root,COG4771@2|Bacteria,1FDET@1090|Chlorobi	1090|Chlorobi	P	TonB-dependent receptor plug	-	-	-	ko:K02014	-	-	-	-	ko00000,ko02000	1.B.14	-	-	CarbopepD_reg_2,Plug,TonB_dep_Rec
BYD3_k127_6144547_2	1121904.ARBP01000002_gene7073	2.674e-51	185.0	COG0231@1|root,COG0231@2|Bacteria,4NDXA@976|Bacteroidetes,47MZS@768503|Cytophagia	976|Bacteroidetes	J	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase	efp	GO:0003674,GO:0003676,GO:0003723,GO:0003746,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006412,GO:0006414,GO:0006518,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576	-	ko:K02356	-	-	-	-	ko00000,ko03012	-	-	-	EFP,EFP_N,Elong-fact-P_C
BYD3_k127_6144547_1	1122176.KB903542_gene328	3.185e-137	443.0	COG0332@1|root,COG0332@2|Bacteria,4NEYH@976|Bacteroidetes,1IPRR@117747|Sphingobacteriia	976|Bacteroidetes	I	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids	fabH	GO:0003674,GO:0003824,GO:0006082,GO:0006629,GO:0006631,GO:0008150,GO:0008152,GO:0009987,GO:0016740,GO:0016746,GO:0016747,GO:0019752,GO:0032787,GO:0033818,GO:0043436,GO:0044237,GO:0044238,GO:0044255,GO:0044281,GO:0071704	2.3.1.180	ko:K00648	ko00061,ko01100,ko01212,map00061,map01100,map01212	M00082,M00083	R10707	RC00004,RC02729,RC02888	ko00000,ko00001,ko00002,ko01000,ko01004	-	-	-	ACP_syn_III,ACP_syn_III_C
BYD3_k127_6144547_0	1380384.JADN01000003_gene942	4.844e-150	484.0	COG1228@1|root,COG1228@2|Bacteria,4NE6C@976|Bacteroidetes,1HYME@117743|Flavobacteriia	976|Bacteroidetes	Q	Belongs to the metallo-dependent hydrolases superfamily. HutI family	hutI	-	3.5.2.7	ko:K01468	ko00340,ko01100,map00340,map01100	M00045	R02288	RC00683	ko00000,ko00001,ko00002,ko01000	-	-	-	Amidohydro_1,Amidohydro_3
BYD3_k127_6159738_1	143224.JQMD01000002_gene4215	1.484e-82	283.0	COG1216@1|root,COG1216@2|Bacteria,4PKFB@976|Bacteroidetes,1IJBW@117743|Flavobacteriia	976|Bacteroidetes	S	Glycosyl transferase family 2	-	-	-	-	-	-	-	-	-	-	-	-	Glyco_transf_7C,Glycos_transf_2
BYD3_k127_6159738_2	1123248.KB893316_gene4667	1.75e-49	179.0	COG5646@1|root,COG5646@2|Bacteria,4NSDH@976|Bacteroidetes,1ITAW@117747|Sphingobacteriia	976|Bacteroidetes	S	Domain of unknown function (DU1801)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1801
BYD3_k127_6159738_0	1122176.KB903558_gene4166	2.581e-138	453.0	COG1404@1|root,COG1404@2|Bacteria	2|Bacteria	O	Belongs to the peptidase S8 family	bpr	GO:0005575,GO:0005576	-	ko:K13276	-	-	-	-	ko00000,ko01000,ko01002,ko03110	-	-	-	CarbopepD_reg_2,CarboxypepD_reg,Inhibitor_I9,Kelch_1,Malectin,PKD,Peptidase_M6,Peptidase_S8
BYD3_k127_616719_1	1341155.FSS13T_12360	3.82e-43	163.0	COG3158@1|root,COG3158@2|Bacteria,4NET9@976|Bacteroidetes,1HX75@117743|Flavobacteriia,2NTDV@237|Flavobacterium	976|Bacteroidetes	P	Transport of potassium into the cell	kup	-	-	ko:K03549	-	-	-	-	ko00000,ko02000	2.A.72	-	-	K_trans
BYD3_k127_616719_2	760192.Halhy_4548	1.394e-27	118.0	COG2849@1|root,COG2849@2|Bacteria	2|Bacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	MORN_2
BYD3_k127_616719_0	760192.Halhy_4547	2.192e-169	545.0	COG0671@1|root,COG0671@2|Bacteria,4NF9W@976|Bacteroidetes,1IQCY@117747|Sphingobacteriia	976|Bacteroidetes	I	Phosphoesterase PA-phosphatase related	-	-	-	-	-	-	-	-	-	-	-	-	PAP2
BYD3_k127_616719_3	1122176.KB903543_gene645	8.686e-14	85.0	COG3291@1|root,COG3291@2|Bacteria	2|Bacteria	S	metallopeptidase activity	-	-	-	-	-	-	-	-	-	-	-	-	CHU_C,PKD,Peptidase_M43,SprB
BYD3_k127_6171704_1	237368.SCABRO_00874	3.532e-75	258.0	COG2066@1|root,COG2066@2|Bacteria,2J00B@203682|Planctomycetes	203682|Planctomycetes	E	Glutaminase	glsA	-	3.5.1.2	ko:K01425	ko00220,ko00250,ko00471,ko01100,ko04724,ko04727,ko04964,ko05206,ko05230,map00220,map00250,map00471,map01100,map04724,map04727,map04964,map05206,map05230	-	R00256,R01579	RC00010,RC02798	ko00000,ko00001,ko01000	-	-	-	Glutaminase
BYD3_k127_6171704_0	1122176.KB903598_gene4680	2.307e-201	660.0	COG1409@1|root,COG1409@2|Bacteria,4NJT0@976|Bacteroidetes	976|Bacteroidetes	P	metallophosphoesterase	-	-	-	-	-	-	-	-	-	-	-	-	Metallophos,Pur_ac_phosph_N
BYD3_k127_6171704_3	326427.Cagg_3282	0.0003268	54.0	COG1319@1|root,COG1319@2|Bacteria	2|Bacteria	C	xanthine dehydrogenase activity	-	-	-	-	-	-	-	-	-	-	-	-	FAD_binding_5
BYD3_k127_6171704_2	1107311.Q767_02610	5.33e-10	64.0	2CBAK@1|root,302Q1@2|Bacteria,4PJRP@976|Bacteroidetes,1INII@117743|Flavobacteriia,2NZRS@237|Flavobacterium	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_6176931_2	1122176.KB903531_gene3083	4.65e-31	128.0	COG3291@1|root,COG3291@2|Bacteria,4P0B8@976|Bacteroidetes,1IVY1@117747|Sphingobacteriia	976|Bacteroidetes	M	C-terminal domain of CHU protein family	-	-	-	-	-	-	-	-	-	-	-	-	CHU_C,SprB
BYD3_k127_6176931_1	1122621.ATZA01000044_gene2130	7.349e-42	160.0	COG1595@1|root,COG1595@2|Bacteria,4NQCH@976|Bacteroidetes,1ISH7@117747|Sphingobacteriia	976|Bacteroidetes	K	COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog	-	-	-	ko:K03088	-	-	-	-	ko00000,ko03021	-	-	-	Sigma70_r2,Sigma70_r4_2
BYD3_k127_6176931_0	760192.Halhy_3426	7.283e-109	358.0	COG0841@1|root,COG0841@2|Bacteria,4NDZG@976|Bacteroidetes,1IPQ1@117747|Sphingobacteriia	976|Bacteroidetes	V	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family	-	-	-	-	-	-	-	-	-	-	-	-	ACR_tran
BYD3_k127_6200275_0	760192.Halhy_1343	3.373e-75	260.0	COG1104@1|root,COG1104@2|Bacteria,4NG58@976|Bacteroidetes,1IQ14@117747|Sphingobacteriia	976|Bacteroidetes	E	Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins	iscS	-	2.8.1.7	ko:K04487	ko00730,ko01100,ko04122,map00730,map01100,map04122	-	R07460,R11528,R11529	RC01789,RC02313	ko00000,ko00001,ko01000,ko02048,ko03016,ko03029	-	-	-	Aminotran_5
BYD3_k127_6200275_1	760192.Halhy_1341	5.206e-47	170.0	COG0316@1|root,COG0316@2|Bacteria,4NQC8@976|Bacteroidetes,1IT1Q@117747|Sphingobacteriia	976|Bacteroidetes	S	Belongs to the HesB IscA family	iscA	-	-	ko:K13628	-	-	-	-	ko00000,ko03016	-	-	-	Fe-S_biosyn
BYD3_k127_6200275_2	1227739.Hsw_1553	1.191e-25	123.0	COG0682@1|root,COG0682@2|Bacteria	2|Bacteria	M	lipoprotein biosynthetic process	-	-	-	-	-	-	-	-	-	-	-	-	LGT
BYD3_k127_620353_4	1123248.KB893327_gene750	5.464e-53	199.0	COG2972@1|root,COG2972@2|Bacteria,4NH1Q@976|Bacteroidetes	976|Bacteroidetes	T	Histidine kinase	-	-	-	-	-	-	-	-	-	-	-	-	His_kinase
BYD3_k127_620353_3	1123248.KB893327_gene749	1.868e-77	265.0	COG3279@1|root,COG3279@2|Bacteria,4NP17@976|Bacteroidetes	976|Bacteroidetes	KT	LytTr DNA-binding domain	-	-	-	-	-	-	-	-	-	-	-	-	LytTR,Response_reg
BYD3_k127_620353_6	402612.FP0562	2.742e-39	151.0	COG0514@1|root,COG0514@2|Bacteria,4P3BY@976|Bacteroidetes,1I90Z@117743|Flavobacteriia,2NX33@237|Flavobacterium	976|Bacteroidetes	L	HRDC domain	-	-	-	-	-	-	-	-	-	-	-	-	HRDC
BYD3_k127_620353_7	1122179.KB890470_gene428	2.335e-38	162.0	COG5305@1|root,COG5305@2|Bacteria,4PPD5@976|Bacteroidetes	976|Bacteroidetes	S	Membrane	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_620353_0	1313421.JHBV01000020_gene5292	1.081e-195	635.0	COG1409@1|root,COG1409@2|Bacteria,4NGK2@976|Bacteroidetes,1IWCK@117747|Sphingobacteriia	976|Bacteroidetes	S	Purple acid Phosphatase, N-terminal domain	-	-	-	-	-	-	-	-	-	-	-	-	Metallophos,Pur_ac_phosph_N
BYD3_k127_620353_8	1313421.JHBV01000020_gene5291	1.901e-14	83.0	2BFSG@1|root,329MB@2|Bacteria,4NRMX@976|Bacteroidetes	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_620353_5	196367.JNFG01000002_gene2214	8.727e-45	176.0	COG5563@1|root,COG5563@2|Bacteria,1R9G5@1224|Proteobacteria,2VWW5@28216|Betaproteobacteria,1K6BN@119060|Burkholderiaceae	28216|Betaproteobacteria	S	HAF family	-	-	-	-	-	-	-	-	-	-	-	-	VPEP
BYD3_k127_620353_1	1392488.JHZY01000004_gene2539	5.917e-154	524.0	COG2911@1|root,COG3209@1|root,COG5184@1|root,COG2911@2|Bacteria,COG3209@2|Bacteria,COG5184@2|Bacteria,4PKBQ@976|Bacteroidetes,1IJ6N@117743|Flavobacteriia	976|Bacteroidetes	M	SprB repeat	-	-	-	-	-	-	-	-	-	-	-	-	CHU_C,SprB
BYD3_k127_620353_9	1122179.KB890415_gene2000	1.451e-13	72.0	COG3291@1|root,COG3386@1|root,COG3291@2|Bacteria,COG3386@2|Bacteria,4NEMU@976|Bacteroidetes	976|Bacteroidetes	N	Pregnancy-associated plasma protein-A	-	-	-	-	-	-	-	-	-	-	-	-	DUF1929,F5_F8_type_C,Laminin_G_3,Peptidase_M43
BYD3_k127_620353_2	1408433.JHXV01000027_gene3728	6.662e-90	325.0	COG2208@1|root,COG3292@1|root,COG4191@1|root,COG2208@2|Bacteria,COG3292@2|Bacteria,COG4191@2|Bacteria,4NG28@976|Bacteroidetes,1I1IG@117743|Flavobacteriia	976|Bacteroidetes	KT	regulator	-	-	-	-	-	-	-	-	-	-	-	-	GerE,Reg_prop,Y_Y_Y
BYD3_k127_6218373_1	1237149.C900_03434	2.692e-46	169.0	COG0599@1|root,COG0599@2|Bacteria,4NNRB@976|Bacteroidetes,47QTE@768503|Cytophagia	976|Bacteroidetes	S	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity	-	-	-	-	-	-	-	-	-	-	-	-	CMD
BYD3_k127_6218373_2	1218108.KB908297_gene2985	3.087e-05	57.0	COG3292@1|root,COG4886@1|root,COG3292@2|Bacteria,COG4886@2|Bacteria,4NHTI@976|Bacteroidetes,1HZ0K@117743|Flavobacteriia	976|Bacteroidetes	T	zinc metalloprotease	-	-	-	-	-	-	-	-	-	-	-	-	CUB,Pep_M12B_propep,Reprolysin_5
BYD3_k127_6218373_0	1250232.JQNJ01000001_gene1580	1.747e-123	409.0	COG3118@1|root,COG3118@2|Bacteria,4PND9@976|Bacteroidetes,1IKUJ@117743|Flavobacteriia	976|Bacteroidetes	O	ASPIC and UnbV	-	-	-	-	-	-	-	-	-	-	-	-	UnbV_ASPIC,VCBS
BYD3_k127_6229298_1	1122179.KB890436_gene1456	6.793e-85	286.0	COG2086@1|root,COG2086@2|Bacteria,4NFWB@976|Bacteroidetes,1IQTX@117747|Sphingobacteriia	976|Bacteroidetes	C	Electron transfer flavoprotein	etfB	-	-	ko:K03521	-	-	-	-	ko00000	-	-	-	ETF
BYD3_k127_6229298_0	760192.Halhy_0359	7.57e-120	392.0	COG2025@1|root,COG2025@2|Bacteria,4NFSE@976|Bacteroidetes,1IPHN@117747|Sphingobacteriia	976|Bacteroidetes	C	Electron transfer flavoprotein	etfA	-	-	ko:K03522	-	-	-	-	ko00000,ko04147	-	-	-	ETF,ETF_alpha
BYD3_k127_6229298_2	1122176.KB903531_gene3122	3.372e-67	234.0	COG1259@1|root,COG1259@2|Bacteria,4NGSW@976|Bacteroidetes,1IRH8@117747|Sphingobacteriia	976|Bacteroidetes	S	PFAM Uncharacterised ACR, COG1259	-	-	-	ko:K08999	-	-	-	-	ko00000	-	-	-	DNase-RNase,UVR
BYD3_k127_6229298_4	665959.HMPREF1013_04677	3.498e-21	94.0	2EREK@1|root,334PD@2|Bacteria,1W3IR@1239|Firmicutes,4I0UM@91061|Bacilli,1ZJYX@1386|Bacillus	91061|Bacilli	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_6229298_3	1122176.KB903565_gene3382	1.392e-60	233.0	COG2304@1|root,COG2374@1|root,COG3391@1|root,COG4935@1|root,COG2304@2|Bacteria,COG2374@2|Bacteria,COG3391@2|Bacteria,COG4935@2|Bacteria,4PKD0@976|Bacteroidetes,1IXV1@117747|Sphingobacteriia	976|Bacteroidetes	O	Belongs to the peptidase S8 family	-	-	-	-	-	-	-	-	-	-	-	-	CHU_C,HYR,LRR_adjacent
BYD3_k127_6232043_4	1107311.Q767_13430	3.566e-11	72.0	COG3637@1|root,COG3637@2|Bacteria,4NR9K@976|Bacteroidetes,1I34P@117743|Flavobacteriia,2NWCZ@237|Flavobacterium	976|Bacteroidetes	M	Outer membrane protein beta-barrel domain	-	-	-	-	-	-	-	-	-	-	-	-	OMP_b-brl,OMP_b-brl_2
BYD3_k127_6232043_5	172045.KS04_04485	2.194e-10	70.0	COG3637@1|root,COG3637@2|Bacteria,4NR9K@976|Bacteroidetes,1I34P@117743|Flavobacteriia,34PVP@308865|Elizabethkingia	976|Bacteroidetes	M	Outer membrane protein beta-barrel domain	-	-	-	-	-	-	-	-	-	-	-	-	OMP_b-brl,OMP_b-brl_2
BYD3_k127_6232043_1	1122176.KB903542_gene334	3.62e-106	350.0	COG0020@1|root,COG0020@2|Bacteria,4NF2B@976|Bacteroidetes,1IPRJ@117747|Sphingobacteriia	976|Bacteroidetes	I	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids	uppS	GO:0002094,GO:0003674,GO:0003824,GO:0004659,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006066,GO:0006629,GO:0006720,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0009058,GO:0009987,GO:0016093,GO:0016094,GO:0016740,GO:0016765,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046165,GO:0071704,GO:1901576,GO:1901615,GO:1901617	2.5.1.31	ko:K00806	ko00900,ko01110,map00900,map01110	-	R06447	RC00279,RC02839	ko00000,ko00001,ko01000,ko01006	-	-	-	Prenyltransf
BYD3_k127_6232043_0	760192.Halhy_3123	2.61e-293	923.0	COG4775@1|root,COG4775@2|Bacteria,4NE6Z@976|Bacteroidetes,1IR22@117747|Sphingobacteriia	976|Bacteroidetes	M	Outer membrane protein assembly complex, YaeT protein	yaeT	-	-	ko:K07277	-	-	-	-	ko00000,ko02000,ko03029	1.B.33	-	-	Bac_surface_Ag,POTRA
BYD3_k127_6232043_2	760192.Halhy_3280	3.872e-100	336.0	COG2267@1|root,COG2267@2|Bacteria,4NK38@976|Bacteroidetes,1IT00@117747|Sphingobacteriia	976|Bacteroidetes	I	Protein of unknown function (DUF3089)	-	-	-	-	-	-	-	-	-	-	-	-	DUF3089
BYD3_k127_6232043_3	760192.Halhy_3279	8.839e-53	193.0	COG4191@1|root,COG4191@2|Bacteria,4NEMP@976|Bacteroidetes,1J0MH@117747|Sphingobacteriia	976|Bacteroidetes	T	His Kinase A (phosphoacceptor) domain	vicK	-	-	-	-	-	-	-	-	-	-	-	HATPase_c
BYD3_k127_6265814_0	1122176.KB903536_gene1794	7.998e-133	442.0	COG1361@1|root,COG2356@1|root,COG3291@1|root,COG1361@2|Bacteria,COG2356@2|Bacteria,COG3291@2|Bacteria,4PM78@976|Bacteroidetes	976|Bacteroidetes	M	Conserved repeat domain	-	-	-	-	-	-	-	-	-	-	-	-	CARDB
BYD3_k127_6265814_2	1185876.BN8_00772	1.182e-94	346.0	COG3209@1|root,COG3291@1|root,COG3209@2|Bacteria,COG3291@2|Bacteria,4NDZC@976|Bacteroidetes,47MNQ@768503|Cytophagia	976|Bacteroidetes	O	SprB repeat	-	-	-	-	-	-	-	-	-	-	-	-	CHU_C,PKD,SprB,TIG
BYD3_k127_6265814_3	1121898.Q766_18605	4.389e-32	146.0	COG0526@1|root,COG0526@2|Bacteria,4P2YC@976|Bacteroidetes,1I8S9@117743|Flavobacteriia,2NTRQ@237|Flavobacterium	976|Bacteroidetes	CO	Redoxin	-	-	-	-	-	-	-	-	-	-	-	-	Redoxin
BYD3_k127_6265814_1	643867.Ftrac_0637	1.553e-121	407.0	COG1629@1|root,COG4771@2|Bacteria,4NEIG@976|Bacteroidetes,47JGS@768503|Cytophagia	976|Bacteroidetes	P	TonB-dependent Receptor Plug	-	-	-	-	-	-	-	-	-	-	-	-	CarbopepD_reg_2,CarboxypepD_reg,OMP_b-brl_3,Plug
BYD3_k127_6273862_0	1086011.HJ01_01657	2.332e-208	653.0	COG3158@1|root,COG3158@2|Bacteria,4NET9@976|Bacteroidetes,1HX75@117743|Flavobacteriia,2NVRU@237|Flavobacterium	976|Bacteroidetes	P	K+ potassium transporter	-	-	-	ko:K03549	-	-	-	-	ko00000,ko02000	2.A.72	-	-	K_trans
BYD3_k127_6273862_1	1121286.AUMT01000022_gene1703	2.178e-138	448.0	2CB8G@1|root,2Z88H@2|Bacteria,4NF68@976|Bacteroidetes,1HYYV@117743|Flavobacteriia,3ZPT8@59732|Chryseobacterium	976|Bacteroidetes	S	Putative beta-barrel porin-2, OmpL-like. bbp2	-	-	-	-	-	-	-	-	-	-	-	-	BBP2
BYD3_k127_6273862_3	471854.Dfer_2672	5.609e-94	314.0	COG0384@1|root,COG0384@2|Bacteria,4NEWM@976|Bacteroidetes,47JVW@768503|Cytophagia	976|Bacteroidetes	S	phenazine biosynthesis protein PhzF family	-	-	-	-	-	-	-	-	-	-	-	-	PhzC-PhzF
BYD3_k127_6273862_2	1122176.KB903532_gene2449	8.31e-103	370.0	COG3292@1|root,COG4585@1|root,COG3292@2|Bacteria,COG4585@2|Bacteria,4NPAJ@976|Bacteroidetes	976|Bacteroidetes	T	Two component regulator three Y	-	-	-	-	-	-	-	-	-	-	-	-	HisKA_3,Reg_prop,Y_Y_Y
BYD3_k127_6273862_5	700598.Niako_0690	1.349e-25	115.0	COG2197@1|root,COG2197@2|Bacteria,4NHTM@976|Bacteroidetes,1ITQW@117747|Sphingobacteriia	976|Bacteroidetes	T	COGs COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain	-	-	-	-	-	-	-	-	-	-	-	-	GerE,Response_reg
BYD3_k127_6273862_4	504487.JCM19302_2833	9.486e-86	295.0	COG0296@1|root,COG0296@2|Bacteria,4NJ7Z@976|Bacteroidetes,1HZ6E@117743|Flavobacteriia	976|Bacteroidetes	G	Glycogen recognition site of AMP-activated protein kinase	-	-	-	-	-	-	-	-	-	-	-	-	AMPK1_CBM
BYD3_k127_6273862_6	1296416.JACB01000006_gene273	4.919e-11	64.0	2DBKE@1|root,2Z9SW@2|Bacteria,4NRWN@976|Bacteroidetes,1I012@117743|Flavobacteriia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	Asp_protease_2
BYD3_k127_6301193_2	357809.Cphy_1688	2.586e-22	113.0	COG4447@1|root,COG4447@2|Bacteria,1UU3Y@1239|Firmicutes,24C6F@186801|Clostridia	186801|Clostridia	S	cellulase activity	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_6301193_1	1239962.C943_00131	2.342e-31	126.0	COG2207@1|root,COG2207@2|Bacteria,4NVDF@976|Bacteroidetes,47RUM@768503|Cytophagia	976|Bacteroidetes	K	Transcriptional regulator	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_6301193_0	1137281.D778_02221	2.963e-138	451.0	COG3174@1|root,COG3174@2|Bacteria,4NKP6@976|Bacteroidetes,1HYVZ@117743|Flavobacteriia	976|Bacteroidetes	S	Domain of unknown function (DUF4010)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4010,MgtC
BYD3_k127_6301193_3	159749.K0TFQ8	3.605e-15	83.0	KOG1216@1|root,KOG1216@2759|Eukaryota	2759|Eukaryota	S	sensory perception of sound	-	-	-	-	-	-	-	-	-	-	-	-	FG-GAP_2
BYD3_k127_6312274_3	136037.KDR17659	3.877e-15	79.0	COG5580@1|root,KOG2936@2759|Eukaryota,39P2Y@33154|Opisthokonta,3BFN4@33208|Metazoa,3CRH1@33213|Bilateria,41V1E@6656|Arthropoda,3SFS7@50557|Insecta	33208|Metazoa	O	It is involved in the biological process described with response to stress	AHSA1	GO:0001671,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006457,GO:0008047,GO:0008150,GO:0009987,GO:0030234,GO:0031072,GO:0032781,GO:0043085,GO:0043462,GO:0044093,GO:0044424,GO:0044444,GO:0044464,GO:0050790,GO:0051087,GO:0051336,GO:0051345,GO:0051879,GO:0060589,GO:0060590,GO:0065007,GO:0065009,GO:0098772	-	-	-	-	-	-	-	-	-	-	AHSA1,Aha1_N
BYD3_k127_6312274_0	1122176.KB903565_gene3409	1.023e-245	783.0	COG1629@1|root,COG1629@2|Bacteria,4P4MW@976|Bacteroidetes,1IRHX@117747|Sphingobacteriia	976|Bacteroidetes	P	Outer membrane protein beta-barrel family	-	-	-	-	-	-	-	-	-	-	-	-	CarbopepD_reg_2,CarboxypepD_reg,OMP_b-brl_3,Plug
BYD3_k127_6312274_1	1168034.FH5T_06985	6.727e-78	266.0	COG0702@1|root,COG0702@2|Bacteria,4NGMR@976|Bacteroidetes	976|Bacteroidetes	GM	epimerase	-	-	-	-	-	-	-	-	-	-	-	-	Epimerase
BYD3_k127_6312274_2	421531.IX38_03830	2.438e-44	168.0	28MS7@1|root,2ZB0M@2|Bacteria,4NHCQ@976|Bacteroidetes,1IMW4@117743|Flavobacteriia,3ZT22@59732|Chryseobacterium	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_6333698_0	143224.JQMD01000002_gene998	1.236e-173	554.0	COG0022@1|root,COG1071@1|root,COG0022@2|Bacteria,COG1071@2|Bacteria,4NE71@976|Bacteroidetes,1HXMC@117743|Flavobacteriia	976|Bacteroidetes	C	Pyruvate 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type	bfmBA	-	1.2.4.4	ko:K11381	ko00280,ko00640,ko01100,ko01110,ko01130,map00280,map00640,map01100,map01110,map01130	M00036	R07599,R07600,R07601,R07602,R07603,R07604,R10996,R10997	RC00027,RC00627,RC02743,RC02883,RC02949,RC02953	br01601,ko00000,ko00001,ko00002,ko01000	-	-	-	E1_dh,Transket_pyr,Transketolase_C
BYD3_k127_6333698_2	760192.Halhy_3642	4.074e-44	169.0	COG1381@1|root,COG1381@2|Bacteria,4NIBQ@976|Bacteroidetes,1IS4Q@117747|Sphingobacteriia	976|Bacteroidetes	L	Involved in DNA repair and RecF pathway recombination	recO	-	-	ko:K03584	ko03440,map03440	-	-	-	ko00000,ko00001,ko03400	-	-	-	RecO_C,RecO_N
BYD3_k127_6333698_1	485918.Cpin_0381	2.218e-50	182.0	COG1764@1|root,COG1764@2|Bacteria,4NQKB@976|Bacteroidetes,1IT1Y@117747|Sphingobacteriia	976|Bacteroidetes	O	TIGRFAM Peroxiredoxin, osmotically inducible protein C, subgroup	osmC	-	-	ko:K04063	-	-	-	-	ko00000	-	-	-	OsmC
BYD3_k127_6333698_5	485918.Cpin_1422	2.433e-12	77.0	2C2QD@1|root,33JG0@2|Bacteria,4PQ05@976|Bacteroidetes,1IZHI@117747|Sphingobacteriia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_6333698_3	1185876.BN8_05813	3.846e-29	121.0	COG1696@1|root,COG1696@2|Bacteria,4NFK5@976|Bacteroidetes,47ME9@768503|Cytophagia	976|Bacteroidetes	M	membrane protein involved in D-alanine export	-	-	-	-	-	-	-	-	-	-	-	-	MBOAT
BYD3_k127_6350392_0	1124780.ANNU01000006_gene2955	1.837e-63	243.0	COG1629@1|root,COG1629@2|Bacteria,4PKRK@976|Bacteroidetes,47Y3I@768503|Cytophagia	976|Bacteroidetes	P	TonB dependent receptor	-	-	-	-	-	-	-	-	-	-	-	-	CarbopepD_reg_2,Plug,TonB_dep_Rec
BYD3_k127_6350392_1	1178825.ALIH01000001_gene2568	2.05e-05	56.0	COG2304@1|root,COG2304@2|Bacteria,4NFNQ@976|Bacteroidetes,1I0RD@117743|Flavobacteriia	976|Bacteroidetes	S	Von Willebrand factor A	-	-	-	-	-	-	-	-	-	-	-	-	M64_N,Peptidase_M64
BYD3_k127_6350392_2	266748.HY04_07010	0.0001261	51.0	28NA0@1|root,2ZBDV@2|Bacteria,4NJGM@976|Bacteroidetes,1HZQ5@117743|Flavobacteriia,3ZQ1R@59732|Chryseobacterium	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	DUF4906,Fib_succ_major
BYD3_k127_6382299_0	760192.Halhy_1114	2.088e-182	574.0	COG5520@1|root,COG5520@2|Bacteria,4NF4C@976|Bacteroidetes,1INPD@117747|Sphingobacteriia	976|Bacteroidetes	G	Belongs to the glycosyl hydrolase 30 family	-	-	3.2.1.45	ko:K01201	ko00511,ko00600,ko01100,ko04142,map00511,map00600,map01100,map04142	-	R01498	RC00059,RC00451	ko00000,ko00001,ko01000	-	GH30	-	Glyco_hydro_30,Glyco_hydro_30C
BYD3_k127_6382299_1	402612.FP0570	4.308e-115	379.0	COG0330@1|root,COG0330@2|Bacteria,4NFNB@976|Bacteroidetes,1IEI1@117743|Flavobacteriia,2NUF7@237|Flavobacterium	976|Bacteroidetes	O	prohibitin homologues	-	-	-	-	-	-	-	-	-	-	-	-	Band_7
BYD3_k127_6382299_4	1123248.KB893348_gene323	1.58e-60	223.0	COG2972@1|root,COG2972@2|Bacteria	2|Bacteria	T	Histidine kinase	-	-	-	-	-	-	-	-	-	-	-	-	His_kinase,Rho_RNA_bind
BYD3_k127_6382299_3	1123248.KB893348_gene324	6.705e-90	307.0	COG2972@1|root,COG2972@2|Bacteria,4NN11@976|Bacteroidetes,1IXVB@117747|Sphingobacteriia	976|Bacteroidetes	T	Histidine kinase	-	-	-	-	-	-	-	-	-	-	-	-	His_kinase
BYD3_k127_6382299_2	1123248.KB893348_gene325	1.367e-102	339.0	COG3279@1|root,COG3279@2|Bacteria,4NGBF@976|Bacteroidetes,1IX5E@117747|Sphingobacteriia	976|Bacteroidetes	K	Signal transduction response regulator, receiver	-	-	-	-	-	-	-	-	-	-	-	-	LytTR,Response_reg
BYD3_k127_6397877_0	1313421.JHBV01000049_gene67	3.78e-168	535.0	COG0343@1|root,COG0343@2|Bacteria,4NE15@976|Bacteroidetes,1INNJ@117747|Sphingobacteriia	976|Bacteroidetes	J	Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine)	tgt	-	2.4.2.29	ko:K00773	-	-	R03789,R10209	RC00063	ko00000,ko01000,ko03016	-	-	-	TGT
BYD3_k127_6397877_3	1122176.KB903558_gene4187	3.859e-62	231.0	COG0438@1|root,COG0438@2|Bacteria,4NE6S@976|Bacteroidetes	976|Bacteroidetes	M	glycosyl transferase	-	-	-	-	-	-	-	-	-	-	-	-	Glyco_trans_1_4,Glyco_transf_4
BYD3_k127_6397877_2	1313421.JHBV01000042_gene3372	8.957e-103	346.0	COG0438@1|root,COG0438@2|Bacteria,4NEX8@976|Bacteroidetes,1IT3G@117747|Sphingobacteriia	976|Bacteroidetes	M	COG0438 Glycosyltransferase	-	-	-	ko:K13004	-	-	-	-	ko00000,ko01000,ko01003,ko01005	-	GT4	-	Glyco_trans_1_4,Glyco_trans_4_2,Glyco_transf_4,Glycos_transf_1
BYD3_k127_6397877_1	1004149.AFOE01000042_gene2718	2.979e-111	371.0	COG0836@1|root,COG0836@2|Bacteria,4NE1Y@976|Bacteroidetes,1HXFU@117743|Flavobacteriia	976|Bacteroidetes	M	mannose-1-phosphate guanylyltransferase	manC	-	2.7.7.13	ko:K00971	ko00051,ko00520,ko01100,ko01110,map00051,map00520,map01100,map01110	M00114,M00361,M00362	R00885	RC00002	ko00000,ko00001,ko00002,ko01000	-	-	-	NTP_transferase
BYD3_k127_6397877_4	1121011.AUCB01000002_gene383	2.336e-16	79.0	COG0381@1|root,COG0381@2|Bacteria,4NGBD@976|Bacteroidetes,1HXDA@117743|Flavobacteriia,23HM8@178469|Arenibacter	976|Bacteroidetes	M	UDP-N-acetylglucosamine 2-epimerase	wecB	-	5.1.3.14	ko:K01791	ko00520,ko01100,ko05111,map00520,map01100,map05111	M00362	R00420	RC00290	ko00000,ko00001,ko00002,ko01000,ko01005	-	-	-	Epimerase_2
BYD3_k127_6407648_9	1121104.AQXH01000001_gene1846	7.366e-16	79.0	2CBKC@1|root,32RTJ@2|Bacteria,4NTE7@976|Bacteroidetes,1ITRI@117747|Sphingobacteriia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_6407648_5	760192.Halhy_6380	1.85e-62	219.0	COG2096@1|root,COG2096@2|Bacteria,4NFHQ@976|Bacteroidetes,1IRY6@117747|Sphingobacteriia	976|Bacteroidetes	S	Cobalamin adenosyltransferase	yvqK	-	2.5.1.17	ko:K00798	ko00860,ko01100,map00860,map01100	M00122	R01492,R05220,R07268	RC00533	ko00000,ko00001,ko00002,ko01000	-	-	-	Cob_adeno_trans
BYD3_k127_6407648_1	1122176.KB903531_gene3006	1.714e-102	339.0	COG1136@1|root,COG1136@2|Bacteria,4NE5N@976|Bacteroidetes,1IQ8R@117747|Sphingobacteriia	976|Bacteroidetes	V	ABC transporter	macB	-	-	ko:K02003	-	M00258	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	ABC_tran
BYD3_k127_6407648_2	1122176.KB903531_gene3008	9.824e-101	331.0	COG1428@1|root,COG1428@2|Bacteria,4NFA8@976|Bacteroidetes,1INU0@117747|Sphingobacteriia	976|Bacteroidetes	F	deoxynucleoside kinase	dck	-	-	-	-	-	-	-	-	-	-	-	dNK
BYD3_k127_6407648_6	485918.Cpin_6290	8.518e-62	220.0	COG0325@1|root,COG0325@2|Bacteria,4NE42@976|Bacteroidetes,1INT9@117747|Sphingobacteriia	976|Bacteroidetes	S	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis	yggS	-	-	ko:K06997	-	-	-	-	ko00000	-	-	-	Ala_racemase_N
BYD3_k127_6407648_8	760192.Halhy_6292	3.562e-42	162.0	COG1051@1|root,COG1051@2|Bacteria,4NS9I@976|Bacteroidetes,1ITRK@117747|Sphingobacteriia	976|Bacteroidetes	F	Belongs to the Nudix hydrolase family	-	-	-	-	-	-	-	-	-	-	-	-	NUDIX
BYD3_k127_6407648_4	1122179.KB890434_gene889	1.175e-67	236.0	COG0461@1|root,COG0461@2|Bacteria,4NEF8@976|Bacteroidetes,1IPI8@117747|Sphingobacteriia	976|Bacteroidetes	F	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)	pyrE	-	2.4.2.10,4.1.1.23	ko:K00762,ko:K13421	ko00240,ko00983,ko01100,map00240,map00983,map01100	M00051	R00965,R01870,R08231	RC00063,RC00409,RC00611	ko00000,ko00001,ko00002,ko01000	-	-	-	OMPdecase,Pribosyltran
BYD3_k127_6407648_0	1122176.KB903531_gene3118	1.241e-163	521.0	COG1363@1|root,COG1363@2|Bacteria,4NG97@976|Bacteroidetes,1INSP@117747|Sphingobacteriia	976|Bacteroidetes	G	peptidase M42	frvX	-	-	-	-	-	-	-	-	-	-	-	Peptidase_M42
BYD3_k127_6407648_10	926559.JoomaDRAFT_1946	8.8e-06	57.0	COG0382@1|root,COG0382@2|Bacteria,4NM5C@976|Bacteroidetes,1HWRB@117743|Flavobacteriia	976|Bacteroidetes	H	Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_6407648_7	1317122.ATO12_09670	7.866e-44	164.0	COG0251@1|root,COG0251@2|Bacteria,4NPT2@976|Bacteroidetes,1I274@117743|Flavobacteriia,2YJV0@290174|Aquimarina	976|Bacteroidetes	J	Endoribonuclease L-PSP	-	-	-	-	-	-	-	-	-	-	-	-	Aldo_ket_red,Ribonuc_L-PSP
BYD3_k127_6407648_3	1278309.KB907103_gene1058	2.684e-87	292.0	COG0602@1|root,COG0602@2|Bacteria,1MUJ2@1224|Proteobacteria,1RNQZ@1236|Gammaproteobacteria,1XIHG@135619|Oceanospirillales	135619|Oceanospirillales	H	Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7- carboxy-7-deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds	queE	-	4.3.99.3	ko:K10026	ko00790,ko01100,map00790,map01100	-	R10002	RC02989	ko00000,ko00001,ko01000,ko03016	-	-	-	Fer4_14,Radical_SAM
BYD3_k127_6410527_1	700598.Niako_6289	1.277e-123	409.0	COG0258@1|root,COG0749@1|root,COG0258@2|Bacteria,COG0749@2|Bacteria,4NDVA@976|Bacteroidetes,1IPFU@117747|Sphingobacteriia	976|Bacteroidetes	L	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity	polA	-	2.7.7.7	ko:K02335	ko00230,ko00240,ko01100,ko03030,ko03410,ko03420,ko03440,map00230,map00240,map01100,map03030,map03410,map03420,map03440	-	R00375,R00376,R00377,R00378	RC02795	ko00000,ko00001,ko01000,ko03032,ko03400	-	-	-	5_3_exonuc,5_3_exonuc_N,DNA_pol_A,DNA_pol_A_exo1
BYD3_k127_6410527_2	1122179.KB890420_gene2429	1.527e-42	164.0	COG1266@1|root,COG1266@2|Bacteria	2|Bacteria	V	CAAX protease self-immunity	-	-	-	ko:K07052	-	-	-	-	ko00000	-	-	-	Abi
BYD3_k127_6410527_0	1122179.KB890420_gene2430	1.778e-151	493.0	COG0277@1|root,COG0277@2|Bacteria,4NSZB@976|Bacteroidetes	976|Bacteroidetes	C	D-arabinono-1,4-lactone oxidase	-	-	-	-	-	-	-	-	-	-	-	-	ALO,FAD_binding_4
BYD3_k127_6486788_1	1122176.KB903540_gene73	1.258e-114	374.0	COG1127@1|root,COG1127@2|Bacteria,4NETG@976|Bacteroidetes,1IP0Y@117747|Sphingobacteriia	976|Bacteroidetes	Q	ABC transporter	metN	-	-	ko:K02065	ko02010,map02010	M00210,M00669,M00670	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.27	-	-	ABC_tran
BYD3_k127_6486788_2	760192.Halhy_2400	1.291e-94	316.0	COG0767@1|root,COG0767@2|Bacteria,4NEZ8@976|Bacteroidetes,1IQDU@117747|Sphingobacteriia	976|Bacteroidetes	Q	ABC-type transport system involved in resistance to organic solvents permease component	mlaE	-	-	ko:K02066	ko02010,map02010	M00210,M00669,M00670	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.27	-	-	MlaE
BYD3_k127_6486788_3	485918.Cpin_0668	1.181e-69	243.0	COG0300@1|root,COG0300@2|Bacteria,4PM21@976|Bacteroidetes	976|Bacteroidetes	S	KR domain	-	-	-	-	-	-	-	-	-	-	-	-	adh_short
BYD3_k127_6486788_0	1122176.KB903546_gene1003	1.366e-119	389.0	COG2133@1|root,COG2133@2|Bacteria,4NDV1@976|Bacteroidetes,1ISZC@117747|Sphingobacteriia	976|Bacteroidetes	G	Glucose / Sorbosone dehydrogenase	-	-	-	-	-	-	-	-	-	-	-	-	GSDH
BYD3_k127_6487765_1	1122176.KB903565_gene3229	2.874e-76	262.0	COG0803@1|root,COG0803@2|Bacteria,4NGMC@976|Bacteroidetes,1IYDH@117747|Sphingobacteriia	976|Bacteroidetes	P	Zinc-uptake complex component A periplasmic	mntA	-	-	ko:K09815,ko:K11707	ko02010,map02010	M00242,M00319	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.15,3.A.1.15.3,3.A.1.15.5	-	-	ZnuA
BYD3_k127_6487765_3	1492738.FEM21_00480	1.674e-70	245.0	COG1321@1|root,COG1321@2|Bacteria,4NGUP@976|Bacteroidetes,1HXI2@117743|Flavobacteriia,2NSWI@237|Flavobacterium	976|Bacteroidetes	K	Iron-dependent repressor	sirR	-	-	ko:K03709	-	-	-	-	ko00000,ko03000	-	-	-	Fe_dep_repr_C,Fe_dep_repress,FeoA
BYD3_k127_6487765_0	313596.RB2501_12662	9.019e-223	700.0	COG2211@1|root,COG2211@2|Bacteria,4NE3F@976|Bacteroidetes,1HWRM@117743|Flavobacteriia	976|Bacteroidetes	G	major facilitator	-	-	-	ko:K16211	-	-	-	-	ko00000,ko02000	2.A.2.6	-	-	MFS_1,MFS_2
BYD3_k127_6487765_4	1250006.JHZZ01000001_gene987	3.992e-29	120.0	29X26@1|root,30IQM@2|Bacteria,4P9J9@976|Bacteroidetes,1IGJJ@117743|Flavobacteriia,3VWW1@52959|Polaribacter	976|Bacteroidetes	S	23S rRNA-intervening sequence protein	-	-	-	-	-	-	-	-	-	-	-	-	23S_rRNA_IVP
BYD3_k127_6487765_2	1120951.AUBG01000014_gene3206	1.979e-75	256.0	COG0823@1|root,COG1506@1|root,COG0823@2|Bacteria,COG1506@2|Bacteria,4NHS5@976|Bacteroidetes,1HZ0Y@117743|Flavobacteriia	976|Bacteroidetes	EU	peptidase	pop	GO:0003674,GO:0003824,GO:0004177,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0006508,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008238,GO:0008239,GO:0009056,GO:0009987,GO:0016787,GO:0019538,GO:0033218,GO:0034641,GO:0042277,GO:0042597,GO:0042802,GO:0042803,GO:0043170,GO:0043171,GO:0043603,GO:0044237,GO:0044238,GO:0044248,GO:0044464,GO:0046983,GO:0070011,GO:0071704,GO:0140096,GO:1901564,GO:1901565,GO:1901575	-	-	-	-	-	-	-	-	-	-	PD40,Peptidase_S9
BYD3_k127_6526539_2	1313421.JHBV01000021_gene4837	2.176e-104	346.0	COG1853@1|root,COG1853@2|Bacteria,4NF4H@976|Bacteroidetes,1IQ9R@117747|Sphingobacteriia	976|Bacteroidetes	S	flavin reductase	-	-	-	-	-	-	-	-	-	-	-	-	Flavin_Reduct
BYD3_k127_6526539_3	926562.Oweho_2930	8.431e-64	228.0	COG3485@1|root,COG3485@2|Bacteria,4NFYS@976|Bacteroidetes,1I1U9@117743|Flavobacteriia	976|Bacteroidetes	Q	Protocatechuate 3,4-dioxygenase beta subunit	-	-	-	-	-	-	-	-	-	-	-	-	Dioxygenase_C
BYD3_k127_6526539_0	504472.Slin_1816	1.805e-241	755.0	COG1680@1|root,COG1680@2|Bacteria,4NEVS@976|Bacteroidetes,47NMR@768503|Cytophagia	976|Bacteroidetes	V	Beta-lactamase	-	-	-	-	-	-	-	-	-	-	-	-	Beta-lactamase
BYD3_k127_6526539_1	319236.JCM19294_1900	1.356e-104	347.0	COG2304@1|root,COG2304@2|Bacteria,4NFX3@976|Bacteroidetes,1HY6K@117743|Flavobacteriia,3HKVR@363408|Nonlabens	976|Bacteroidetes	S	Domain of unknown function (DUF3520)	yfbK	-	-	ko:K07114	-	-	-	-	ko00000,ko02000	1.A.13.2.2,1.A.13.2.3	-	-	CarbopepD_reg_2,DUF3520,Plug,VWA,vWF_A
BYD3_k127_653172_2	927658.AJUM01000047_gene2944	0.0001077	50.0	COG3209@1|root,COG3209@2|Bacteria	2|Bacteria	M	self proteolysis	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_653172_0	1122176.KB903576_gene5005	1.749e-151	490.0	COG1252@1|root,COG1252@2|Bacteria,4NE0H@976|Bacteroidetes,1IR3F@117747|Sphingobacteriia	976|Bacteroidetes	C	PFAM FAD-dependent pyridine nucleotide-disulphide oxidoreductase	ndh	-	1.6.99.3	ko:K03885	ko00190,map00190	-	-	-	ko00000,ko00001,ko01000	-	-	-	Pyr_redox_2
BYD3_k127_653172_1	1004149.AFOE01000009_gene2115	2.149e-17	89.0	COG3250@1|root,COG3250@2|Bacteria,4NGZH@976|Bacteroidetes,1HY22@117743|Flavobacteriia	976|Bacteroidetes	G	Glycoside Hydrolase	-	-	-	-	-	-	-	-	-	-	-	-	Glyco_hydro_106,Glyco_hydro_2_N
BYD3_k127_6549474_2	1416760.AYMS01000051_gene207	2.347e-15	76.0	COG1219@1|root,COG1219@2|Bacteria,4NE1B@976|Bacteroidetes,1HXIP@117743|Flavobacteriia,47HV9@76831|Myroides	976|Bacteroidetes	O	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP	clpX	GO:0000166,GO:0003674,GO:0003824,GO:0004176,GO:0005488,GO:0005524,GO:0006508,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008233,GO:0009056,GO:0009057,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0019538,GO:0030163,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0042623,GO:0043167,GO:0043168,GO:0043170,GO:0044238,GO:0051301,GO:0070011,GO:0071704,GO:0097159,GO:0097367,GO:0140096,GO:1901265,GO:1901363,GO:1901564,GO:1901565,GO:1901575	-	ko:K03544	ko04112,map04112	-	-	-	ko00000,ko00001,ko03110	-	-	-	AAA_2,ClpB_D2-small,zf-C4_ClpX
BYD3_k127_6549474_0	760192.Halhy_2803	9.916e-142	455.0	COG1219@1|root,COG1219@2|Bacteria,4NE1B@976|Bacteroidetes,1IP06@117747|Sphingobacteriia	976|Bacteroidetes	O	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP	clpX	GO:0000166,GO:0003674,GO:0003824,GO:0004176,GO:0005488,GO:0005524,GO:0006508,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008233,GO:0009056,GO:0009057,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0019538,GO:0030163,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0042623,GO:0043167,GO:0043168,GO:0043170,GO:0044238,GO:0051301,GO:0070011,GO:0071704,GO:0097159,GO:0097367,GO:0140096,GO:1901265,GO:1901363,GO:1901564,GO:1901565,GO:1901575	-	ko:K03544	ko04112,map04112	-	-	-	ko00000,ko00001,ko03110	-	-	-	AAA_2,ClpB_D2-small,zf-C4_ClpX
BYD3_k127_6549474_1	1122176.KB903565_gene3398	2.513e-112	365.0	COG0740@1|root,COG0740@2|Bacteria,4NE20@976|Bacteroidetes,1IPWN@117747|Sphingobacteriia	976|Bacteroidetes	OU	Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins	clpP	-	3.4.21.92	ko:K01358	ko04112,ko04212,map04112,map04212	-	-	-	ko00000,ko00001,ko01000,ko01002	-	-	-	CLP_protease
BYD3_k127_6549474_3	984262.SGRA_1409	1.941e-08	65.0	COG0544@1|root,COG0544@2|Bacteria,4NE99@976|Bacteroidetes,1ISDW@117747|Sphingobacteriia	976|Bacteroidetes	O	COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)	tig	-	-	ko:K03545	-	-	-	-	ko00000	-	-	-	Trigger_C,Trigger_N
BYD3_k127_6558060_1	927658.AJUM01000037_gene1941	2.76e-61	225.0	COG0438@1|root,COG0438@2|Bacteria,4NFMB@976|Bacteroidetes,2FMJE@200643|Bacteroidia	976|Bacteroidetes	M	transferase activity, transferring glycosyl groups	-	-	-	-	-	-	-	-	-	-	-	-	Glyco_trans_1_4
BYD3_k127_6558060_0	1313421.JHBV01000043_gene2978	8.993e-86	288.0	COG1060@1|root,COG1060@2|Bacteria,4NGDN@976|Bacteroidetes,1IPM7@117747|Sphingobacteriia	976|Bacteroidetes	H	Radical SAM enzyme that catalyzes the addition of the adenosyl radical to the double bond of 3- (1- carboxyvinyl)oxy benzoate, leading to aminodeoxyfutalosine (AFL), a key intermediate in the formation of menaquinone (MK, vitamin K2) from chorismate	mqnE	-	2.5.1.120	ko:K18285	ko00130,ko01110,map00130,map01110	-	R10667	RC00021,RC03234	ko00000,ko00001,ko01000	-	-	-	Radical_SAM
BYD3_k127_656070_4	1122176.KB903554_gene3923	1.35e-62	220.0	COG0497@1|root,COG0497@2|Bacteria,4PMJC@976|Bacteroidetes,1IX0B@117747|Sphingobacteriia	976|Bacteroidetes	L	Peptidase S46	-	-	-	-	-	-	-	-	-	-	-	-	Peptidase_S46
BYD3_k127_656070_7	1411685.U062_01581	1.578e-36	148.0	COG5522@1|root,COG5522@2|Bacteria,1MYKS@1224|Proteobacteria,1SEKW@1236|Gammaproteobacteria	1236|Gammaproteobacteria	S	Integral membrane protein (intg_mem_TP0381)	-	-	-	-	-	-	-	-	-	-	-	-	Intg_mem_TP0381
BYD3_k127_656070_3	1122179.KB890497_gene2856	1.797e-66	229.0	COG0669@1|root,COG0669@2|Bacteria,4NM84@976|Bacteroidetes,1ISUA@117747|Sphingobacteriia	976|Bacteroidetes	H	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate	coaD	-	2.7.7.3	ko:K00954	ko00770,ko01100,map00770,map01100	M00120	R03035	RC00002	ko00000,ko00001,ko00002,ko01000	-	-	-	CTP_transf_like
BYD3_k127_656070_0	1122176.KB903554_gene3838	2.904e-261	813.0	COG1012@1|root,COG1012@2|Bacteria,4NFTW@976|Bacteroidetes,1IQEH@117747|Sphingobacteriia	976|Bacteroidetes	C	Aldehyde dehydrogenase family	pruA	-	1.2.1.88,1.5.5.2	ko:K00294,ko:K13821	ko00250,ko00330,ko01100,ko01110,ko01130,map00250,map00330,map01100,map01110,map01130	-	R00245,R00707,R00708,R01253,R04444,R04445,R05051	RC00080,RC00083,RC00216,RC00242,RC00255	ko00000,ko00001,ko01000,ko03000	-	-	-	Aldedh,Pro_dh
BYD3_k127_656070_6	929562.Emtol_1468	1.292e-45	172.0	COG0705@1|root,COG0705@2|Bacteria,4NECA@976|Bacteroidetes,47N8U@768503|Cytophagia	976|Bacteroidetes	S	PFAM Rhomboid family	-	-	-	-	-	-	-	-	-	-	-	-	Rhomboid
BYD3_k127_656070_8	1313421.JHBV01000014_gene3962	1.427e-34	138.0	COG1576@1|root,COG1576@2|Bacteria,4NMFP@976|Bacteroidetes,1ISE3@117747|Sphingobacteriia	976|Bacteroidetes	J	Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA	rlmH	-	2.1.1.177	ko:K00783	-	-	-	-	ko00000,ko01000,ko03009	-	-	-	SPOUT_MTase
BYD3_k127_656070_2	1122176.KB903537_gene1630	2.664e-148	483.0	COG0366@1|root,COG0366@2|Bacteria,4NEVK@976|Bacteroidetes,1IRWG@117747|Sphingobacteriia	976|Bacteroidetes	G	Alpha amylase, catalytic domain	amyB	-	-	-	-	-	-	-	-	-	-	-	Alpha-amylase,Alpha-amylase_C,Malt_amylase_C
BYD3_k127_656070_5	925409.KI911562_gene224	5.542e-49	185.0	COG0564@1|root,COG0564@2|Bacteria,4NHKH@976|Bacteroidetes,1IQTT@117747|Sphingobacteriia	976|Bacteroidetes	J	Pseudouridine synthase	-	-	5.4.99.23,5.4.99.24	ko:K06179,ko:K06180	-	-	-	-	ko00000,ko01000,ko03009	-	-	-	PseudoU_synth_2
BYD3_k127_656070_1	760192.Halhy_6505	1.052e-212	679.0	COG0196@1|root,COG1216@1|root,COG0196@2|Bacteria,COG1216@2|Bacteria,4NFP0@976|Bacteroidetes,1IP9Q@117747|Sphingobacteriia	976|Bacteroidetes	H	glycosyl transferase family 2	-	-	-	ko:K07011	-	-	-	-	ko00000	-	-	-	Glycos_transf_2
BYD3_k127_656070_9	1122176.KB903531_gene2832	1.035e-28	127.0	28P29@1|root,2ZBYD@2|Bacteria,4NMK6@976|Bacteroidetes,1IRUJ@117747|Sphingobacteriia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_656070_10	761193.Runsl_4017	1.094e-24	107.0	COG0400@1|root,COG0400@2|Bacteria,4NHWT@976|Bacteroidetes,47QUH@768503|Cytophagia	976|Bacteroidetes	S	PFAM phospholipase Carboxylesterase	-	-	-	-	-	-	-	-	-	-	-	-	Abhydrolase_2,FSH1
BYD3_k127_656070_11	1122176.KB903609_gene5142	3.716e-15	78.0	COG0400@1|root,COG0400@2|Bacteria,4NHWT@976|Bacteroidetes	976|Bacteroidetes	S	Pfam Phospholipase Carboxylesterase	-	-	-	-	-	-	-	-	-	-	-	-	Abhydrolase_2,FSH1
BYD3_k127_6567435_0	1048983.EL17_12315	3.026e-235	739.0	COG0591@1|root,COG0591@2|Bacteria,4PKHI@976|Bacteroidetes,47MV2@768503|Cytophagia	976|Bacteroidetes	E	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family	-	-	-	-	-	-	-	-	-	-	-	-	SSF
BYD3_k127_6567435_5	760192.Halhy_2405	9.921e-52	191.0	COG3063@1|root,COG3063@2|Bacteria	2|Bacteria	NU	photosynthesis	-	-	-	-	-	-	-	-	-	-	-	-	ANAPC5,TPR_16,TPR_8
BYD3_k127_6567435_8	1127696.HMPREF9134_01574	3.96e-12	74.0	COG1399@1|root,COG1399@2|Bacteria,4NMQT@976|Bacteroidetes,2FPCJ@200643|Bacteroidia,22XVX@171551|Porphyromonadaceae	976|Bacteroidetes	S	Uncharacterized ACR, COG1399	-	-	-	-	-	-	-	-	-	-	-	-	DUF177
BYD3_k127_6567435_7	1122179.KB890444_gene5007	6.486e-19	87.0	COG0333@1|root,COG0333@2|Bacteria,4NUXU@976|Bacteroidetes,1IU0H@117747|Sphingobacteriia	976|Bacteroidetes	J	Belongs to the bacterial ribosomal protein bL32 family	rpmF	-	-	ko:K02911	ko03010,map03010	M00178	-	-	br01610,ko00000,ko00001,ko00002,ko03011,ko03029	-	-	-	Ribosomal_L32p
BYD3_k127_6567435_6	1313301.AUGC01000001_gene1625	2.488e-42	159.0	COG0251@1|root,COG0251@2|Bacteria,4NQ8M@976|Bacteroidetes	976|Bacteroidetes	J	endoribonuclease L-PSP	yjgF	-	3.5.99.10	ko:K09022	-	-	R11098,R11099	RC03275,RC03354	ko00000,ko01000	-	-	-	Ribonuc_L-PSP
BYD3_k127_6567435_3	1313421.JHBV01000019_gene5381	7.608e-140	451.0	COG0180@1|root,COG0180@2|Bacteria,4NETX@976|Bacteroidetes,1INYI@117747|Sphingobacteriia	976|Bacteroidetes	J	Tryptophanyl-tRNA synthetase	trpS	-	6.1.1.2	ko:K01867	ko00970,map00970	M00359,M00360	R03664	RC00055,RC00523	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	-	-	-	tRNA-synt_1b
BYD3_k127_6567435_4	760192.Halhy_4476	2.273e-82	278.0	COG0179@1|root,COG0179@2|Bacteria,4NGCT@976|Bacteroidetes,1INU6@117747|Sphingobacteriia	976|Bacteroidetes	Q	PFAM fumarylacetoacetate (FAA) hydrolase	fahA	-	-	-	-	-	-	-	-	-	-	-	FAA_hydrolase
BYD3_k127_6567435_1	1122179.KB890433_gene4050	4.341e-212	665.0	COG0192@1|root,COG0192@2|Bacteria,4NG7Y@976|Bacteroidetes,1INXM@117747|Sphingobacteriia	976|Bacteroidetes	H	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme	metK	GO:0003674,GO:0003824,GO:0004478,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0016740,GO:0016765,GO:0044424,GO:0044444,GO:0044464	2.5.1.6	ko:K00789	ko00270,ko01100,ko01110,ko01230,map00270,map01100,map01110,map01230	M00034,M00035,M00368,M00609	R00177,R04771	RC00021,RC01211	ko00000,ko00001,ko00002,ko01000	-	-	-	S-AdoMet_synt_C,S-AdoMet_synt_M,S-AdoMet_synt_N
BYD3_k127_6567435_2	760192.Halhy_0419	2.599e-159	514.0	COG0403@1|root,COG1003@1|root,COG0403@2|Bacteria,COG1003@2|Bacteria,4NEDE@976|Bacteroidetes,1INQX@117747|Sphingobacteriia	976|Bacteroidetes	E	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor	gcvP	-	1.4.4.2	ko:K00281,ko:K00283	ko00260,ko00630,ko01100,ko01110,ko01130,ko01200,map00260,map00630,map01100,map01110,map01130,map01200	M00532	R01221,R03425	RC00022,RC00929,RC02834,RC02880	ko00000,ko00001,ko00002,ko01000	-	-	-	GDC-P
BYD3_k127_6567436_0	1296416.JACB01000015_gene4668	1.072e-153	509.0	COG4888@1|root,COG4888@2|Bacteria,4NEE8@976|Bacteroidetes,1HX4C@117743|Flavobacteriia,2YHAY@290174|Aquimarina	976|Bacteroidetes	S	ASPIC and UnbV	-	-	-	-	-	-	-	-	-	-	-	-	UnbV_ASPIC,VCBS
BYD3_k127_6567436_1	1223410.KN050846_gene1208	1.253e-63	232.0	COG3250@1|root,COG3250@2|Bacteria,4P3W0@976|Bacteroidetes,1I918@117743|Flavobacteriia	976|Bacteroidetes	G	Vitamin K-dependent gamma-carboxylase	-	-	-	-	-	-	-	-	-	-	-	-	VKG_Carbox
BYD3_k127_6577677_0	760192.Halhy_6133	1.24e-122	407.0	COG5267@1|root,COG5267@2|Bacteria,4NHSB@976|Bacteroidetes,1IQIN@117747|Sphingobacteriia	976|Bacteroidetes	S	Protein of unknown function (DUF1800)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1800
BYD3_k127_6577677_1	866536.Belba_2106	3.604e-120	394.0	COG0451@1|root,COG0451@2|Bacteria,4NEKA@976|Bacteroidetes,47JU9@768503|Cytophagia	976|Bacteroidetes	M	PFAM NAD dependent epimerase dehydratase family	-	-	5.1.3.6	ko:K08679	ko00520,ko01100,map00520,map01100	-	R01385	RC00289	ko00000,ko00001,ko01000	-	-	-	Epimerase,GDP_Man_Dehyd
BYD3_k127_6577677_2	397291.C804_06311	1.03e-113	374.0	COG0463@1|root,COG0463@2|Bacteria,1TPR3@1239|Firmicutes,248Q5@186801|Clostridia,27IHH@186928|unclassified Lachnospiraceae	186801|Clostridia	M	Glycosyl transferase family 2	-	-	-	-	-	-	-	-	-	-	-	-	Glycos_transf_2
BYD3_k127_658140_4	1185876.BN8_02868	1.21e-13	83.0	2AQ5P@1|root,31FB4@2|Bacteria,4NRIU@976|Bacteroidetes	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_658140_3	1392498.JQLH01000001_gene1361	1.429e-20	106.0	COG3209@1|root,COG3210@1|root,COG5295@1|root,COG3209@2|Bacteria,COG3210@2|Bacteria,COG5295@2|Bacteria,4PFJG@976|Bacteroidetes,1IGAI@117743|Flavobacteriia,2PHWN@252356|Maribacter	976|Bacteroidetes	UW	Chaperone of endosialidase	-	-	-	-	-	-	-	-	-	-	-	-	Peptidase_S74
BYD3_k127_658140_5	1233950.IW22_18500	1.504e-10	74.0	COG1649@1|root,COG3209@1|root,COG1649@2|Bacteria,COG3209@2|Bacteria	2|Bacteria	M	self proteolysis	-	-	3.2.1.22	ko:K07407	ko00052,ko00561,ko00600,ko00603,map00052,map00561,map00600,map00603	-	R01101,R01103,R01104,R01194,R01329,R02926,R03634,R04019,R04470,R05549,R05961,R06091	RC00049,RC00059,RC00451	ko00000,ko00001,ko01000	-	-	-	DUF3370,Peptidase_S74,SLH,SpvB,WG_beta_rep
BYD3_k127_658140_6	1353529.M899_2645	1.004e-09	71.0	COG3210@1|root,COG3420@1|root,COG3210@2|Bacteria,COG3420@2|Bacteria,1NED3@1224|Proteobacteria,42WDX@68525|delta/epsilon subdivisions,2MTVC@213481|Bdellovibrionales,2WRDH@28221|Deltaproteobacteria	213481|Bdellovibrionales	U	cell wall surface anchor family protein	-	-	-	-	-	-	-	-	-	-	-	-	Peptidase_S74
BYD3_k127_658140_1	1120970.AUBZ01000029_gene1051	2.693e-31	126.0	COG2346@1|root,COG2346@2|Bacteria,1QBDE@1224|Proteobacteria,1S9FC@1236|Gammaproteobacteria	1236|Gammaproteobacteria	C	Group 1 truncated hemoglobin	-	-	-	ko:K06886	-	-	-	-	ko00000	-	-	-	Bac_globin
BYD3_k127_658140_2	746697.Aeqsu_1012	9.57e-25	121.0	2DQEX@1|root,336EW@2|Bacteria,4PP00@976|Bacteroidetes	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_658140_0	984262.SGRA_0890	1.28e-79	294.0	COG3291@1|root,COG3291@2|Bacteria	2|Bacteria	S	metallopeptidase activity	-	-	-	-	-	-	-	-	-	-	-	-	CHU_C,PKD,SprB
BYD3_k127_6592203_0	1120966.AUBU01000013_gene327	4.659e-145	468.0	COG0082@1|root,COG0082@2|Bacteria,4NDXJ@976|Bacteroidetes,47KB2@768503|Cytophagia	976|Bacteroidetes	E	Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system	aroC	GO:0000166,GO:0003674,GO:0003824,GO:0004107,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009423,GO:0009987,GO:0010181,GO:0016053,GO:0016829,GO:0016835,GO:0016838,GO:0019438,GO:0019752,GO:0032553,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046417,GO:0048037,GO:0050662,GO:0071704,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576	4.2.3.5	ko:K01736	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	M00022	R01714	RC00586	ko00000,ko00001,ko00002,ko01000	-	-	-	Chorismate_synt
BYD3_k127_6592203_1	1408433.JHXV01000014_gene3608	7.845e-104	344.0	28K7U@1|root,2Z9VT@2|Bacteria,4NIK4@976|Bacteroidetes,1I4P6@117743|Flavobacteriia,2PBJX@246874|Cryomorphaceae	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_6592203_2	760192.Halhy_5720	6.465e-23	103.0	COG1864@1|root,COG1864@2|Bacteria,4NFYJ@976|Bacteroidetes,1IQ67@117747|Sphingobacteriia	976|Bacteroidetes	F	DNA RNA non-specific endonuclease	nucA	-	-	ko:K01173	ko04210,map04210	-	-	-	ko00000,ko00001,ko03029	-	-	-	Endonuclease_NS
BYD3_k127_6603212_0	1122176.KB903576_gene4884	2.022e-172	546.0	COG1048@1|root,COG1048@2|Bacteria,4NDZT@976|Bacteroidetes,1INUB@117747|Sphingobacteriia	976|Bacteroidetes	C	aconitate hydratase	acnA	-	4.2.1.3	ko:K01681	ko00020,ko00630,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01210,ko01230,map00020,map00630,map00720,map01100,map01110,map01120,map01130,map01200,map01210,map01230	M00009,M00010,M00012,M00173,M00740	R01324,R01325,R01900	RC00497,RC00498,RC00618	br01601,ko00000,ko00001,ko00002,ko01000	-	-	-	Aconitase,Aconitase_C
BYD3_k127_6603212_2	641143.HMPREF9331_01143	1.895e-41	155.0	COG1970@1|root,COG1970@2|Bacteria,4NQ49@976|Bacteroidetes,1I33I@117743|Flavobacteriia,1ERYG@1016|Capnocytophaga	976|Bacteroidetes	M	Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell	mscL	-	-	ko:K03282	-	-	-	-	ko00000,ko02000	1.A.22.1	-	-	MscL
BYD3_k127_6603212_1	760192.Halhy_3598	2.172e-149	478.0	COG0171@1|root,COG0388@1|root,COG0171@2|Bacteria,COG0388@2|Bacteria,4NEXG@976|Bacteroidetes,1IPN6@117747|Sphingobacteriia	976|Bacteroidetes	H	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source	nadE	-	6.3.5.1	ko:K01950	ko00760,ko01100,map00760,map01100	M00115	R00257	RC00010,RC00100	ko00000,ko00001,ko00002,ko01000	-	-	-	CN_hydrolase,NAD_synthase
BYD3_k127_6607148_0	1122176.KB903548_gene1192	1.09e-99	336.0	COG1470@1|root,COG1470@2|Bacteria,4NFPN@976|Bacteroidetes,1IWMV@117747|Sphingobacteriia	976|Bacteroidetes	S	Carboxypeptidase regulatory-like domain	-	-	-	-	-	-	-	-	-	-	-	-	CarbopepD_reg_2
BYD3_k127_6607148_1	745411.B3C1_01620	4.816e-55	203.0	COG0438@1|root,COG0438@2|Bacteria,1PDW1@1224|Proteobacteria,1RZIK@1236|Gammaproteobacteria,1JAMZ@118884|unclassified Gammaproteobacteria	1236|Gammaproteobacteria	M	Capsular polysaccharide biosynthesis protein	-	-	-	-	-	-	-	-	-	-	-	-	Glyco_transf_4,Glycos_transf_1
BYD3_k127_6622946_4	1454004.AW11_00194	1.564e-48	189.0	COG3264@1|root,COG3264@2|Bacteria,1QUDC@1224|Proteobacteria,2VJMG@28216|Betaproteobacteria	28216|Betaproteobacteria	M	mechanosensitive ion channel	-	-	-	-	-	-	-	-	-	-	-	-	MS_channel
BYD3_k127_6622946_5	690850.Desaf_3475	3.709e-38	158.0	28M5B@1|root,2ZAJ4@2|Bacteria,1R7Y9@1224|Proteobacteria	1224|Proteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_6622946_3	1121904.ARBP01000009_gene4379	1.737e-55	201.0	2DICZ@1|root,32UAY@2|Bacteria,4NU7D@976|Bacteroidetes,47SYM@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_6622946_2	700598.Niako_2485	1.659e-58	212.0	2DWQN@1|root,341FB@2|Bacteria,4P4AQ@976|Bacteroidetes	976|Bacteroidetes	S	Protein of unknown function (DUF3575)	-	-	-	-	-	-	-	-	-	-	-	-	DUF3575
BYD3_k127_6622946_0	929713.NIASO_05335	2.665e-244	775.0	COG0457@1|root,COG0457@2|Bacteria,4NDTY@976|Bacteroidetes	976|Bacteroidetes	C	Cytochrome c554 and c-prime	-	-	-	-	-	-	-	-	-	-	-	-	Cytochrome_C554,HEAT_2,Paired_CXXCH_1,TPR_19,TPR_8
BYD3_k127_6622946_1	1341181.FLJC2902T_23310	1.164e-73	256.0	2C3WA@1|root,2Z8P1@2|Bacteria,4NW8R@976|Bacteroidetes,1IADF@117743|Flavobacteriia,2NX79@237|Flavobacterium	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_6622946_6	1341181.FLJC2902T_14510	3.885e-29	117.0	COG3637@1|root,COG3637@2|Bacteria,4NPV9@976|Bacteroidetes,1I47X@117743|Flavobacteriia,2NSX3@237|Flavobacterium	976|Bacteroidetes	M	Outer membrane protein beta-barrel domain	-	-	-	-	-	-	-	-	-	-	-	-	OMP_b-brl_2
BYD3_k127_6631366_2	1122176.KB903556_gene4064	0.0001373	48.0	COG2988@1|root,COG2988@2|Bacteria,4NHWW@976|Bacteroidetes,1IXX3@117747|Sphingobacteriia	976|Bacteroidetes	E	Succinylglutamate desuccinylase / Aspartoacylase family	astE	-	3.5.1.96	ko:K05526	ko00330,ko01100,map00330,map01100	-	R00411	RC00064,RC00090	ko00000,ko00001,ko01000	-	-	-	AstE_AspA
BYD3_k127_6631366_1	925409.KI911562_gene1722	2.367e-71	256.0	COG1538@1|root,COG1538@2|Bacteria,4NPS6@976|Bacteroidetes,1IXES@117747|Sphingobacteriia	976|Bacteroidetes	MU	Outer membrane efflux protein	-	-	-	-	-	-	-	-	-	-	-	-	OEP
BYD3_k127_6631366_0	925409.KI911562_gene1723	3.806e-80	281.0	COG0845@1|root,COG0845@2|Bacteria,4NJ59@976|Bacteroidetes,1IW9B@117747|Sphingobacteriia	976|Bacteroidetes	M	Biotin-lipoyl like	-	-	-	ko:K15727	-	-	-	-	ko00000,ko02000	8.A.1.2.1	-	-	HlyD_D23
BYD3_k127_6640165_0	760192.Halhy_1548	5.455e-130	424.0	COG2267@1|root,COG2267@2|Bacteria,4NIGT@976|Bacteroidetes,1IUJU@117747|Sphingobacteriia	976|Bacteroidetes	I	COGs COG0596 hydrolase or acyltransferase (alpha beta hydrolase superfamily)	-	-	3.4.11.5	ko:K01259	ko00330,map00330	-	R00135	-	ko00000,ko00001,ko01000,ko01002	-	-	-	Hydrolase_4
BYD3_k127_6640165_3	153721.MYP_3113	1.287e-42	164.0	COG4775@1|root,COG4775@2|Bacteria,4NRT9@976|Bacteroidetes,47VR2@768503|Cytophagia	976|Bacteroidetes	M	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_6640165_4	1121889.AUDM01000002_gene448	5.737e-19	102.0	COG3210@1|root,COG4675@1|root,COG5295@1|root,COG3210@2|Bacteria,COG4675@2|Bacteria,COG5295@2|Bacteria,4NJTK@976|Bacteroidetes,1HZNB@117743|Flavobacteriia	976|Bacteroidetes	UW	surface antigen	-	-	-	-	-	-	-	-	-	-	-	-	Peptidase_S74,YadA_head
BYD3_k127_6640165_5	1121100.JCM6294_2411	3.894e-18	93.0	COG0810@1|root,COG0810@2|Bacteria,4NMG7@976|Bacteroidetes,2FPKW@200643|Bacteroidia,4AKHT@815|Bacteroidaceae	976|Bacteroidetes	U	Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins	-	-	-	ko:K03832	-	-	-	-	ko00000,ko02000	2.C.1.1	-	-	TonB_C
BYD3_k127_6640165_8	985255.APHJ01000023_gene2695	0.0001461	47.0	COG4319@1|root,COG4319@2|Bacteria,4PAP3@976|Bacteroidetes,1I8VA@117743|Flavobacteriia,2P7PQ@244698|Gillisia	976|Bacteroidetes	S	Domain of unknown function (DUF4440)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4440
BYD3_k127_6640165_6	1123278.KB893571_gene2234	1.638e-17	84.0	COG4319@1|root,COG4319@2|Bacteria,4NQVC@976|Bacteroidetes,47U4E@768503|Cytophagia	976|Bacteroidetes	S	Domain of unknown function (DUF4440)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4440
BYD3_k127_6640165_1	700598.Niako_1515	2.173e-80	287.0	COG2885@1|root,COG2885@2|Bacteria,4NE8J@976|Bacteroidetes,1IPSE@117747|Sphingobacteriia	976|Bacteroidetes	M	Belongs to the ompA family	-	-	-	-	-	-	-	-	-	-	-	-	OmpA,TSP_3
BYD3_k127_6640165_2	929713.NIASO_17945	8.054e-70	252.0	COG1566@1|root,COG1566@2|Bacteria	2|Bacteria	V	PFAM secretion protein HlyD family protein	-	-	-	-	-	-	-	-	-	-	-	-	DUF3667,HlyD_3
BYD3_k127_6640165_7	1392490.JHZX01000001_gene931	1.534e-10	61.0	COG0639@1|root,COG0639@2|Bacteria,4NFPU@976|Bacteroidetes,1IIYZ@117743|Flavobacteriia	976|Bacteroidetes	T	Diadenosine tetraphosphatase and related serine threonine protein	-	-	-	-	-	-	-	-	-	-	-	-	Metallophos_2
BYD3_k127_6659415_1	1499967.BAYZ01000164_gene6657	2.167e-92	328.0	COG0642@1|root,COG3292@1|root,COG2205@2|Bacteria,COG3292@2|Bacteria,2NNZT@2323|unclassified Bacteria	2|Bacteria	T	Two component regulator propeller	-	-	-	-	-	-	-	-	-	-	-	-	EAL,GGDEF,HATPase_c,HisKA,Reg_prop,Response_reg,Y_Y_Y
BYD3_k127_6659415_0	1123037.AUDE01000005_gene3088	1.077e-212	712.0	COG4191@1|root,COG4191@2|Bacteria,4NEJX@976|Bacteroidetes,1I0JH@117743|Flavobacteriia	976|Bacteroidetes	T	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase	-	-	-	-	-	-	-	-	-	-	-	-	7TMR-DISMED2,7TMR-DISM_7TM,HATPase_c,HisKA,SnoaL_3
BYD3_k127_6688115_0	760192.Halhy_1679	1.74e-128	421.0	COG0557@1|root,COG0557@2|Bacteria,4NE7T@976|Bacteroidetes,1IPGD@117747|Sphingobacteriia	976|Bacteroidetes	K	3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs	rnr	-	-	ko:K12573,ko:K12585	ko03018,map03018	M00391	-	-	ko00000,ko00001,ko00002,ko01000,ko03016,ko03019	-	-	-	OB_RNB,RNB,S1
BYD3_k127_6688115_2	760192.Halhy_5350	3.316e-58	210.0	COG3963@1|root,COG3963@2|Bacteria,4PP1W@976|Bacteroidetes,1IXSI@117747|Sphingobacteriia	976|Bacteroidetes	I	Methyltransferase FkbM domain	-	-	-	-	-	-	-	-	-	-	-	-	Methyltransf_21
BYD3_k127_6688115_1	1168034.FH5T_09710	2.035e-85	310.0	COG1287@1|root,COG1287@2|Bacteria,4NUWQ@976|Bacteroidetes	976|Bacteroidetes	S	oligosaccharyl transferase activity	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_6688115_3	1122176.KB903560_gene3552	2.076e-30	126.0	28H5J@1|root,2Z7I5@2|Bacteria,4NHK6@976|Bacteroidetes,1IQZH@117747|Sphingobacteriia	976|Bacteroidetes	S	Domain of unknown function (DUF4290)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4290
BYD3_k127_6701272_0	1121288.AULL01000011_gene1078	4.573e-142	454.0	COG3033@1|root,COG3033@2|Bacteria,4NEP4@976|Bacteroidetes,1I067@117743|Flavobacteriia,3ZNS9@59732|Chryseobacterium	976|Bacteroidetes	E	Beta-eliminating lyase	tpl	-	-	-	-	-	-	-	-	-	-	-	Beta_elim_lyase
BYD3_k127_6701272_3	1121898.Q766_16365	4.528e-11	76.0	COG3291@1|root,COG3291@2|Bacteria,4PKMZ@976|Bacteroidetes,1I9DA@117743|Flavobacteriia,2P0DU@237|Flavobacterium	976|Bacteroidetes	S	TIGRFAM Por secretion system C-terminal sorting domain	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_6701272_2	1123277.KB893243_gene135	2.824e-15	83.0	2EDR9@1|root,33BZ6@2|Bacteria,4NYGY@976|Bacteroidetes,47VFV@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_6729899_3	1121875.KB907548_gene1369	1.388e-17	87.0	2EAVS@1|root,334X4@2|Bacteria,4NWJY@976|Bacteroidetes,1I6CS@117743|Flavobacteriia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_6729899_2	449673.BACSTE_01429	6.725e-27	119.0	COG4123@1|root,COG4123@2|Bacteria,4NG1X@976|Bacteroidetes,2FMHH@200643|Bacteroidia,4AN81@815|Bacteroidaceae	976|Bacteroidetes	J	Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC)	smtA	GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008175,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016426,GO:0016430,GO:0016740,GO:0016741,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360	2.1.1.223	ko:K15460	-	-	-	-	ko00000,ko01000,ko03016	-	-	-	MTS
BYD3_k127_6729899_1	1122176.KB903609_gene5206	3.887e-28	116.0	2CZWI@1|root,32T79@2|Bacteria,4NSNW@976|Bacteroidetes	976|Bacteroidetes	S	COG NOG19094 non supervised orthologous group	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_6729899_0	760192.Halhy_5796	6.879e-189	597.0	COG0686@1|root,COG0686@2|Bacteria,4NE8F@976|Bacteroidetes,1IQNN@117747|Sphingobacteriia	976|Bacteroidetes	E	Alanine dehydrogenase/PNT, C-terminal domain	ald	-	1.4.1.1	ko:K00259	ko00250,ko00430,ko01100,map00250,map00430,map01100	-	R00396	RC00008	ko00000,ko00001,ko01000	-	-	-	AlaDh_PNT_C,AlaDh_PNT_N
BYD3_k127_6729899_4	404589.Anae109_1615	3.739e-12	66.0	COG2107@1|root,COG2107@2|Bacteria,1NYEA@1224|Proteobacteria,42MXB@68525|delta/epsilon subdivisions,2WIMS@28221|Deltaproteobacteria,2Z0ES@29|Myxococcales	28221|Deltaproteobacteria	H	Catalyzes the conversion of cyclic dehypoxanthine futalosine (cyclic DHFL) into 1,4-dihydroxy-6-naphthoate, a step in the biosynthesis of menaquinone (MK, vitamin K2)	mqnD	-	-	ko:K11785	ko00130,ko01110,map00130,map01110	-	R08589	RC02330	ko00000,ko00001,ko01000	-	-	-	VitK2_biosynth
BYD3_k127_6809192_1	1121481.AUAS01000012_gene370	4.091e-88	298.0	COG0154@1|root,COG0154@2|Bacteria,4NF8C@976|Bacteroidetes,47MMB@768503|Cytophagia	976|Bacteroidetes	J	Amidase	gatA	-	3.5.1.4	ko:K01426	ko00330,ko00360,ko00380,ko00627,ko00643,ko01120,map00330,map00360,map00380,map00627,map00643,map01120	-	R02540,R03096,R03180,R03909,R05551,R05590	RC00010,RC00100,RC00950,RC01025	ko00000,ko00001,ko01000	-	-	-	Amidase
BYD3_k127_6809192_0	313606.M23134_05335	1.239e-138	476.0	COG1372@1|root,COG4447@1|root,COG5184@1|root,COG5492@1|root,COG1372@2|Bacteria,COG4447@2|Bacteria,COG5184@2|Bacteria,COG5492@2|Bacteria,4NEZQ@976|Bacteroidetes,47PGJ@768503|Cytophagia	976|Bacteroidetes	G	Participates in initiation and elongation during chromosome replication	-	-	-	-	-	-	-	-	-	-	-	-	PKD,Sortilin-Vps10
BYD3_k127_6809192_2	1237149.C900_00166	6.967e-25	117.0	COG1044@1|root,COG1044@2|Bacteria,4NQJ1@976|Bacteroidetes	976|Bacteroidetes	M	tail collar domain protein	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_6809192_3	1107311.Q767_02645	3.351e-20	94.0	COG1917@1|root,COG1917@2|Bacteria,4PCHY@976|Bacteroidetes,1ID3X@117743|Flavobacteriia,2NX7G@237|Flavobacterium	976|Bacteroidetes	S	Cupin domain	-	-	-	-	-	-	-	-	-	-	-	-	Cupin_2
BYD3_k127_6831847_3	1121382.JQKG01000010_gene4721	1.906e-44	170.0	COG2323@1|root,COG2323@2|Bacteria,1WMG8@1297|Deinococcus-Thermus	1297|Deinococcus-Thermus	S	Protein of unknown function (DUF421)	-	-	-	-	-	-	-	-	-	-	-	-	DUF421
BYD3_k127_6831847_5	658187.LDG_8953	7.625e-13	72.0	2ECSH@1|root,336Q2@2|Bacteria,1QBQ8@1224|Proteobacteria,1T7A9@1236|Gammaproteobacteria,1JF4B@118969|Legionellales	118969|Legionellales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_6831847_0	362418.IW19_13450	3.164e-172	556.0	COG0665@1|root,COG0723@1|root,COG0665@2|Bacteria,COG0723@2|Bacteria,4NFT6@976|Bacteroidetes,1I14A@117743|Flavobacteriia,2NV3V@237|Flavobacterium	976|Bacteroidetes	CE	FAD dependent oxidoreductase	-	-	-	-	-	-	-	-	-	-	-	-	DAO,Rieske
BYD3_k127_6831847_8	525257.HMPREF0204_13910	0.0002078	55.0	COG2234@1|root,COG2234@2|Bacteria,4NJCD@976|Bacteroidetes,1HZ5Q@117743|Flavobacteriia,3ZPW2@59732|Chryseobacterium	976|Bacteroidetes	S	Leucyl aminopeptidase	-	-	3.4.11.10,3.4.11.6	ko:K19701	-	-	-	-	ko00000,ko01000,ko01002	-	-	-	Peptidase_M28
BYD3_k127_6831847_4	1232410.KI421418_gene2412	3.929e-31	142.0	COG1520@1|root,COG3291@1|root,COG3419@1|root,COG4932@1|root,COG1520@2|Bacteria,COG3291@2|Bacteria,COG3419@2|Bacteria,COG4932@2|Bacteria,1PHH4@1224|Proteobacteria,434C7@68525|delta/epsilon subdivisions,2X27H@28221|Deltaproteobacteria,43UBU@69541|Desulfuromonadales	28221|Deltaproteobacteria	NU	Putative metal-binding motif	-	-	-	-	-	-	-	-	-	-	-	-	Cu-binding_MopE
BYD3_k127_6831847_6	1121912.AUHD01000007_gene398	2.087e-07	64.0	COG1520@1|root,COG1874@1|root,COG4447@1|root,COG1520@2|Bacteria,COG1874@2|Bacteria,COG4447@2|Bacteria,4PI15@976|Bacteroidetes,1I4K5@117743|Flavobacteriia	976|Bacteroidetes	G	Beta-galactosidase	-	-	-	-	-	-	-	-	-	-	-	-	PSII_BNR
BYD3_k127_6831847_7	643867.Ftrac_1010	8.304e-07	63.0	COG3291@1|root,COG3291@2|Bacteria,4NPCA@976|Bacteroidetes,47S64@768503|Cytophagia	976|Bacteroidetes	S	PKD domain	-	-	-	-	-	-	-	-	-	-	-	-	CHU_C,PKD
BYD3_k127_6831847_1	1107311.Q767_03120	1.55e-140	454.0	COG1680@1|root,COG1680@2|Bacteria,4NFUI@976|Bacteroidetes,1HWMZ@117743|Flavobacteriia	976|Bacteroidetes	V	beta-lactamase	-	-	-	-	-	-	-	-	-	-	-	-	Beta-lactamase
BYD3_k127_6831847_2	1123278.KB893582_gene1062	1.709e-72	248.0	COG0262@1|root,COG0262@2|Bacteria,4NQK0@976|Bacteroidetes,47PT4@768503|Cytophagia	976|Bacteroidetes	H	PFAM RibD C-terminal domain	-	-	1.5.1.3	ko:K00287	ko00670,ko00790,ko01100,ko01523,map00670,map00790,map01100,map01523	M00126,M00840	R00936,R00937,R00939,R00940,R02235,R02236,R11765	RC00109,RC00110,RC00158	ko00000,ko00001,ko00002,ko01000	-	-	-	RibD_C
BYD3_k127_685344_6	925409.KI911562_gene1869	1.625e-16	93.0	2CI2X@1|root,2ZR94@2|Bacteria,4P8NA@976|Bacteroidetes,1J01W@117747|Sphingobacteriia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_685344_2	1122179.KB890447_gene201	1.663e-45	170.0	COG1595@1|root,COG1595@2|Bacteria,4NNNF@976|Bacteroidetes	976|Bacteroidetes	K	Belongs to the sigma-70 factor family. ECF subfamily	-	-	-	ko:K03088	-	-	-	-	ko00000,ko03021	-	-	-	Sigma70_r2,Sigma70_r4_2
BYD3_k127_685344_0	760192.Halhy_5824	1.815e-121	398.0	COG1533@1|root,COG1533@2|Bacteria,4NE62@976|Bacteroidetes,1IPD6@117747|Sphingobacteriia	976|Bacteroidetes	L	Radical SAM	-	-	-	-	-	-	-	-	-	-	-	-	Radical_SAM
BYD3_k127_685344_1	760192.Halhy_0183	2.126e-50	182.0	COG0517@1|root,COG0517@2|Bacteria,4PNZH@976|Bacteroidetes,1J0W1@117747|Sphingobacteriia	976|Bacteroidetes	S	signal transduction protein with CBS domains	-	-	-	-	-	-	-	-	-	-	-	-	CBS
BYD3_k127_685344_5	1004149.AFOE01000049_gene1904	1.247e-26	113.0	COG1186@1|root,COG1186@2|Bacteria,4NQ41@976|Bacteroidetes,1I3Z8@117743|Flavobacteriia	976|Bacteroidetes	J	chain release factor	arfB	-	-	ko:K15034	-	-	-	-	ko00000,ko03012	-	-	-	RF-1
BYD3_k127_685344_4	1313421.JHBV01000031_gene1496	4.978e-40	156.0	COG1309@1|root,COG1309@2|Bacteria,4NQ99@976|Bacteroidetes,1ISRH@117747|Sphingobacteriia	976|Bacteroidetes	K	PFAM Bacterial regulatory proteins, tetR family	-	-	-	-	-	-	-	-	-	-	-	-	TetR_N
BYD3_k127_685344_3	1122179.KB890416_gene2710	6.926e-41	160.0	COG1538@1|root,COG1538@2|Bacteria,4NF4X@976|Bacteroidetes,1IPWM@117747|Sphingobacteriia	976|Bacteroidetes	MU	PFAM Outer membrane efflux protein	-	-	-	-	-	-	-	-	-	-	-	-	OEP
BYD3_k127_6865055_0	760192.Halhy_1599	5.025e-95	318.0	COG2908@1|root,COG2908@2|Bacteria,4NFD8@976|Bacteroidetes,1IQAN@117747|Sphingobacteriia	976|Bacteroidetes	S	Phosphoesterase	-	-	-	-	-	-	-	-	-	-	-	-	Metallophos,Metallophos_2
BYD3_k127_6873254_5	1107311.Q767_00360	4.737e-60	233.0	COG2911@1|root,COG3291@1|root,COG3391@1|root,COG2911@2|Bacteria,COG3291@2|Bacteria,COG3391@2|Bacteria,4NIU0@976|Bacteroidetes,1HXV1@117743|Flavobacteriia	976|Bacteroidetes	S	Parallel beta-helix repeats	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_6873254_1	1124780.ANNU01000017_gene1917	2.435e-112	367.0	COG1968@1|root,COG1968@2|Bacteria,4NGIZ@976|Bacteroidetes,47KGZ@768503|Cytophagia	976|Bacteroidetes	V	Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin	uppP	-	3.6.1.27	ko:K06153	ko00550,map00550	-	R05627	RC00002	ko00000,ko00001,ko01000,ko01011	-	-	-	BacA
BYD3_k127_6873254_3	1453505.JASY01000007_gene1031	6.504e-84	290.0	COG2067@1|root,COG2067@2|Bacteria,4NGWZ@976|Bacteroidetes,1IJ7F@117743|Flavobacteriia,2NUCT@237|Flavobacterium	976|Bacteroidetes	I	Protein of unknown function (DUF2490)	-	-	-	-	-	-	-	-	-	-	-	-	DUF2490
BYD3_k127_6873254_4	686340.Metal_0288	4.791e-83	283.0	COG1309@1|root,COG1309@2|Bacteria	2|Bacteria	K	transcriptional regulator	-	-	-	-	-	-	-	-	-	-	-	-	TetR_N
BYD3_k127_6873254_0	468059.AUHA01000002_gene1342	9.047e-209	660.0	COG0659@1|root,COG0659@2|Bacteria,4NE9G@976|Bacteroidetes,1IWEW@117747|Sphingobacteriia	976|Bacteroidetes	P	Sulfate permease family	-	-	-	ko:K03321	-	-	-	-	ko00000,ko02000	2.A.53.3	-	-	Sulfate_transp
BYD3_k127_6873254_2	686340.Metal_0290	1.197e-95	316.0	COG0288@1|root,COG0288@2|Bacteria,1NGFN@1224|Proteobacteria,1S237@1236|Gammaproteobacteria,1XG19@135618|Methylococcales	135618|Methylococcales	H	Reversible hydration of carbon dioxide	-	-	-	-	-	-	-	-	-	-	-	-	Pro_CA
BYD3_k127_6916325_2	760192.Halhy_5838	1.078e-151	488.0	COG3193@1|root,COG3193@2|Bacteria,4PP22@976|Bacteroidetes	976|Bacteroidetes	S	SusD family	-	-	-	ko:K21572	-	-	-	-	ko00000,ko02000	8.A.46.1,8.A.46.3	-	-	SusD-like_3,SusD_RagB
BYD3_k127_6916325_1	760192.Halhy_5839	0.0	1052.0	COG3055@1|root,COG4733@1|root,COG3055@2|Bacteria,COG4733@2|Bacteria,4PP23@976|Bacteroidetes,1J0XS@117747|Sphingobacteriia	976|Bacteroidetes	S	Concanavalin A-like lectin/glucanases superfamily	-	-	-	-	-	-	-	-	-	-	-	-	Laminin_G_3
BYD3_k127_6916325_0	1122176.KB903547_gene1097	0.0	1430.0	COG4733@1|root,COG4733@2|Bacteria,4NPYJ@976|Bacteroidetes,1IV35@117747|Sphingobacteriia	976|Bacteroidetes	S	Concanavalin A-like lectin/glucanases superfamily	-	-	-	-	-	-	-	-	-	-	-	-	Laminin_G_3
BYD3_k127_6956175_6	1122176.KB903543_gene599	8.976e-20	92.0	COG2010@1|root,COG2010@2|Bacteria	2|Bacteria	C	Cytochrome c	-	-	-	ko:K00406,ko:K12263	ko00190,ko01100,ko02020,map00190,map01100,map02020	M00156	-	-	ko00000,ko00001,ko00002	3.D.4.3	-	-	Cytochrome_CBB3,SirB
BYD3_k127_6956175_1	1123326.JFBL01000023_gene2544	6.361e-53	195.0	COG1741@1|root,COG1741@2|Bacteria	2|Bacteria	O	Belongs to the pirin family	-	-	-	ko:K06911	-	-	-	-	ko00000	-	-	-	Pirin,Pirin_C
BYD3_k127_6956175_4	1123277.KB893200_gene6417	2.443e-32	134.0	2EBX7@1|root,335WI@2|Bacteria,4NV52@976|Bacteroidetes,47QDZ@768503|Cytophagia	976|Bacteroidetes	S	Putative zincin peptidase	-	-	-	-	-	-	-	-	-	-	-	-	DUF3267
BYD3_k127_6956175_5	1121912.AUHD01000004_gene1874	2.381e-28	119.0	COG0071@1|root,COG0071@2|Bacteria,4NQXY@976|Bacteroidetes,1I382@117743|Flavobacteriia	976|Bacteroidetes	O	Belongs to the small heat shock protein (HSP20) family	-	-	-	ko:K13993	ko04141,map04141	-	-	-	ko00000,ko00001,ko03110	-	-	-	HSP20
BYD3_k127_6956175_7	649349.Lbys_2645	7.942e-18	88.0	COG0071@1|root,COG0071@2|Bacteria,4NQXY@976|Bacteroidetes,47R7Q@768503|Cytophagia	976|Bacteroidetes	O	Belongs to the small heat shock protein (HSP20) family	hsp20	-	-	ko:K13993	ko04141,map04141	-	-	-	ko00000,ko00001,ko03110	-	-	-	HSP20
BYD3_k127_6956175_3	471870.BACINT_00085	6.187e-34	141.0	COG0810@1|root,COG4219@1|root,COG0810@2|Bacteria,COG4219@2|Bacteria,4NDWS@976|Bacteroidetes,2FNCU@200643|Bacteroidia,4AKZ6@815|Bacteroidaceae	976|Bacteroidetes	U	Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins	-	-	-	-	-	-	-	-	-	-	-	-	CarbopepD_reg_2,Peptidase_M56,Plug,TonB_C
BYD3_k127_6956175_0	760192.Halhy_2685	1.734e-99	331.0	COG2908@1|root,COG2908@2|Bacteria,4NEF1@976|Bacteroidetes,1IQ9A@117747|Sphingobacteriia	976|Bacteroidetes	S	Calcineurin-like phosphoesterase	lpxH	-	3.6.1.54	ko:K03269	ko00540,ko01100,map00540,map01100	M00060	R04549	RC00002	ko00000,ko00001,ko00002,ko01000,ko01005	-	-	-	Metallophos,Metallophos_2
BYD3_k127_6956175_2	1237149.C900_03219	3.329e-42	156.0	COG0662@1|root,COG0662@2|Bacteria,4NFU2@976|Bacteroidetes,47PIW@768503|Cytophagia	976|Bacteroidetes	G	Catalyzes the oxidative ring opening of 3- hydroxyanthranilate to 2-amino-3-carboxymuconate semialdehyde, which spontaneously cyclizes to quinolinate	nbaC	-	1.13.11.6	ko:K00452	ko00380,ko01100,map00380,map01100	M00038	R02665	RC00387	ko00000,ko00001,ko00002,ko01000	-	-	-	3-HAO
BYD3_k127_6965290_2	1121396.KB892946_gene2917	7.39e-67	241.0	COG0823@1|root,COG3291@1|root,COG3591@1|root,COG4676@1|root,COG0823@2|Bacteria,COG3291@2|Bacteria,COG3591@2|Bacteria,COG4676@2|Bacteria	2|Bacteria	UW	Protein conserved in bacteria	lpqB	-	2.7.13.3	ko:K07654	ko02020,map02020	M00461	-	-	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	-	-	-	Germane,Gmad1
BYD3_k127_6965290_4	477641.MODMU_1325	2.584e-27	124.0	COG1361@1|root,COG3291@1|root,COG4719@1|root,COG1361@2|Bacteria,COG3291@2|Bacteria,COG4719@2|Bacteria,2HF5G@201174|Actinobacteria,4ETGB@85013|Frankiales	201174|Actinobacteria	M	Domain of unknown function DUF11	-	-	-	-	-	-	-	-	-	-	-	-	DUF11
BYD3_k127_6965290_1	760192.Halhy_4683	2.241e-84	286.0	COG0664@1|root,COG0664@2|Bacteria,4NJR1@976|Bacteroidetes,1IQRM@117747|Sphingobacteriia	976|Bacteroidetes	K	COGs COG0664 cAMP-binding protein - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase	-	-	-	-	-	-	-	-	-	-	-	-	HTH_Crp_2,cNMP_binding
BYD3_k127_6965290_0	760192.Halhy_4682	3.107e-234	731.0	COG0671@1|root,COG0671@2|Bacteria,4NF9W@976|Bacteroidetes,1IQCY@117747|Sphingobacteriia	976|Bacteroidetes	I	Phosphoesterase PA-phosphatase related	-	-	-	-	-	-	-	-	-	-	-	-	PAP2
BYD3_k127_6965290_5	649349.Lbys_1048	2.173e-08	59.0	2E017@1|root,32VQH@2|Bacteria,4NZ0I@976|Bacteroidetes,47WSA@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_698089_2	1121904.ARBP01000003_gene6345	3.034e-77	287.0	COG1520@1|root,COG3291@1|root,COG4935@1|root,COG1520@2|Bacteria,COG3291@2|Bacteria,COG4935@2|Bacteria,4NFCW@976|Bacteroidetes,47KMB@768503|Cytophagia	976|Bacteroidetes	M	C-terminal domain of CHU protein family	-	-	-	-	-	-	-	-	-	-	-	-	CHU_C
BYD3_k127_698089_3	1034807.FBFL15_0658	3.186e-35	138.0	COG1672@1|root,COG1672@2|Bacteria,4NU5E@976|Bacteroidetes	976|Bacteroidetes	S	Electron transfer DM13	-	-	-	-	-	-	-	-	-	-	-	-	DM13
BYD3_k127_698089_4	290512.Paes_1770	2.238e-11	65.0	COG0399@1|root,COG0399@2|Bacteria	2|Bacteria	E	UDP-4-amino-4-deoxy-L-arabinose aminotransferase	-	-	2.6.1.102	ko:K13010	ko00520,map00520	-	R10460	RC00006,RC00781	ko00000,ko00001,ko01000,ko01005,ko01007	-	-	-	23S_rRNA_IVP,DegT_DnrJ_EryC1
BYD3_k127_698089_0	1122176.KB903609_gene5170	4.822e-140	475.0	COG1361@1|root,COG1361@2|Bacteria,4PNNJ@976|Bacteroidetes	976|Bacteroidetes	M	Conserved repeat domain	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_698828_1	929704.Myrod_0502	3.969e-18	90.0	COG4775@1|root,COG4775@2|Bacteria,4NE80@976|Bacteroidetes,1HY5H@117743|Flavobacteriia,47HUZ@76831|Myroides	976|Bacteroidetes	M	Surface antigen	-	-	-	-	-	-	-	-	-	-	-	-	Bac_surface_Ag
BYD3_k127_698828_0	1121904.ARBP01000011_gene1484	1.452e-110	404.0	COG2911@1|root,COG2911@2|Bacteria,4NF7F@976|Bacteroidetes,47JE0@768503|Cytophagia	976|Bacteroidetes	M	PFAM Family of	-	-	-	-	-	-	-	-	-	-	-	-	TamB
BYD3_k127_7009536_4	1121875.KB907551_gene1069	4.554e-52	188.0	COG3239@1|root,COG3239@2|Bacteria,4NIC2@976|Bacteroidetes,1HYBV@117743|Flavobacteriia	976|Bacteroidetes	I	Fatty acid desaturase	alkB	-	1.14.15.3	ko:K00496	ko00071,ko00930,map00071,map00930	-	R01347,R02281,R06945	RC00478	ko00000,ko00001,ko01000	-	-	-	FA_desaturase
BYD3_k127_7009536_1	984262.SGRA_2777	8.574e-124	400.0	COG1215@1|root,COG1215@2|Bacteria,4NF0S@976|Bacteroidetes,1IRP2@117747|Sphingobacteriia	976|Bacteroidetes	M	involved in cell wall biogenesis	-	-	-	-	-	-	-	-	-	-	-	-	Glycos_transf_2
BYD3_k127_7009536_6	1250278.JQNQ01000001_gene1666	1.292e-35	143.0	COG3142@1|root,COG3142@2|Bacteria,4NINY@976|Bacteroidetes,1I1FE@117743|Flavobacteriia	976|Bacteroidetes	P	Participates in the control of copper homeostasis	cutC	-	-	ko:K06201	-	-	-	-	ko00000	-	-	-	CutC
BYD3_k127_7009536_2	1122176.KB903543_gene615	3.549e-90	302.0	COG0726@1|root,COG0726@2|Bacteria,4NM7D@976|Bacteroidetes,1IRUN@117747|Sphingobacteriia	976|Bacteroidetes	G	polysaccharide deacetylase	pgdA_1	-	-	-	-	-	-	-	-	-	-	-	Polysacc_deac_1
BYD3_k127_7009536_0	1122176.KB903543_gene616	7.541e-183	584.0	COG0008@1|root,COG0008@2|Bacteria,4NEED@976|Bacteroidetes,1IPV4@117747|Sphingobacteriia	976|Bacteroidetes	J	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)	gltX	-	6.1.1.17	ko:K01885	ko00860,ko00970,ko01100,ko01110,ko01120,map00860,map00970,map01100,map01110,map01120	M00121,M00359,M00360	R05578	RC00055,RC00523	ko00000,ko00001,ko00002,ko01000,ko01007,ko02048,ko03016	-	-	-	tRNA-synt_1c
BYD3_k127_7009536_7	1434325.AZQN01000003_gene2324	1.363e-08	59.0	2E4W4@1|root,32ZQB@2|Bacteria,4NUZZ@976|Bacteroidetes,47RZI@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_7009536_5	760192.Halhy_3182	3.662e-40	154.0	COG2825@1|root,COG2825@2|Bacteria,4NQHJ@976|Bacteroidetes	976|Bacteroidetes	M	Pfam Outer membrane protein (OmpH-like)	ompH	-	-	ko:K06142	-	-	-	-	ko00000	-	-	-	OmpH
BYD3_k127_7009536_3	1122176.KB903534_gene2068	9.49e-57	203.0	COG2825@1|root,COG2825@2|Bacteria,4NH46@976|Bacteroidetes,1IS3M@117747|Sphingobacteriia	976|Bacteroidetes	M	outer membrane chaperone Skp (OmpH)	ompH	-	-	ko:K06142	-	-	-	-	ko00000	-	-	-	OmpH
BYD3_k127_7013389_0	760192.Halhy_3611	0.0	1571.0	COG0458@1|root,COG0458@2|Bacteria,4NEQ0@976|Bacteroidetes,1INWJ@117747|Sphingobacteriia	976|Bacteroidetes	EF	Carbamoyl-phosphate synthase	carB	-	6.3.5.5	ko:K01955	ko00240,ko00250,ko01100,map00240,map00250,map01100	M00051	R00256,R00575,R01395,R10948,R10949	RC00002,RC00010,RC00043,RC02750,RC02798,RC03314	ko00000,ko00001,ko00002,ko01000	-	-	-	CPSase_L_D2,CPSase_L_D3,MGS
BYD3_k127_7013389_1	1313421.JHBV01000026_gene393	6.328e-87	298.0	COG0111@1|root,COG0111@2|Bacteria,4NEMQ@976|Bacteroidetes,1IQNE@117747|Sphingobacteriia	976|Bacteroidetes	EH	D-isomer specific 2-hydroxyacid dehydrogenase	serA	-	1.1.1.399,1.1.1.95	ko:K00058	ko00260,ko00680,ko01100,ko01120,ko01130,ko01200,ko01230,map00260,map00680,map01100,map01120,map01130,map01200,map01230	M00020	R01513	RC00031	ko00000,ko00001,ko00002,ko01000,ko04147	-	-	-	2-Hacid_dh,2-Hacid_dh_C
BYD3_k127_7027174_1	760192.Halhy_2378	2.923e-135	446.0	COG1472@1|root,COG1680@1|root,COG1472@2|Bacteria,COG1680@2|Bacteria,4NET8@976|Bacteroidetes,1IP6G@117747|Sphingobacteriia	976|Bacteroidetes	G	PFAM glycoside hydrolase family 3	-	-	-	-	-	-	-	-	-	-	-	-	Beta-lactamase,Glyco_hydro_3,Glyco_hydro_3_C
BYD3_k127_7027174_0	1122176.KB903571_gene4786	9.638e-163	533.0	COG0457@1|root,COG0457@2|Bacteria,4NMZG@976|Bacteroidetes,1IZUU@117747|Sphingobacteriia	976|Bacteroidetes	S	Tetratricopeptide repeat	-	-	-	-	-	-	-	-	-	-	-	-	DUF1736,TPR_16,TPR_2,TPR_8
BYD3_k127_7035927_1	1313421.JHBV01000011_gene4062	2.489e-93	314.0	COG0491@1|root,COG0491@2|Bacteria,4NE98@976|Bacteroidetes,1INUA@117747|Sphingobacteriia	976|Bacteroidetes	S	beta-lactamase	-	-	-	-	-	-	-	-	-	-	-	-	Lactamase_B
BYD3_k127_7035927_4	1122179.KB890459_gene978	2.721e-48	177.0	COG0054@1|root,COG0054@2|Bacteria,4NNUC@976|Bacteroidetes,1ISBW@117747|Sphingobacteriia	976|Bacteroidetes	H	Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin	ribH	GO:0000906,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006766,GO:0006767,GO:0006771,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009231,GO:0009987,GO:0016740,GO:0016765,GO:0017144,GO:0018130,GO:0034641,GO:0042364,GO:0042726,GO:0042727,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576	2.5.1.78	ko:K00794	ko00740,ko01100,ko01110,map00740,map01100,map01110	M00125	R04457	RC00960	ko00000,ko00001,ko00002,ko01000	-	-	-	DMRL_synthase
BYD3_k127_7035927_3	1122176.KB903531_gene2979	3.558e-58	209.0	COG1729@1|root,COG1729@2|Bacteria,4NEM2@976|Bacteroidetes,1IQ2D@117747|Sphingobacteriia	976|Bacteroidetes	S	Tetratricopeptide	-	-	-	-	-	-	-	-	-	-	-	-	TPR_16,TPR_21,TPR_6,TPR_7,TPR_8
BYD3_k127_7035927_0	1122176.KB903531_gene2978	2.301e-142	460.0	COG1071@1|root,COG1071@2|Bacteria,4NF2J@976|Bacteroidetes,1IPU9@117747|Sphingobacteriia	976|Bacteroidetes	C	The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2)	pdhA	-	1.2.4.1	ko:K00161	ko00010,ko00020,ko00620,ko01100,ko01110,ko01120,ko01130,ko01200,ko04066,ko04922,ko05230,map00010,map00020,map00620,map01100,map01110,map01120,map01130,map01200,map04066,map04922,map05230	M00307	R00014,R00209,R01699,R03270	RC00004,RC00027,RC00627,RC02742,RC02744,RC02882	br01601,ko00000,ko00001,ko00002,ko01000	-	-	-	E1_dh
BYD3_k127_7035927_2	760192.Halhy_5563	4.842e-77	271.0	COG1195@1|root,COG1195@2|Bacteria,4NFHN@976|Bacteroidetes,1IP1J@117747|Sphingobacteriia	976|Bacteroidetes	L	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP	recF	GO:0000731,GO:0006139,GO:0006259,GO:0006281,GO:0006302,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0018130,GO:0019438,GO:0033554,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0071897,GO:0090304,GO:1901360,GO:1901362,GO:1901576	-	ko:K03629	ko03440,map03440	-	-	-	ko00000,ko00001,ko03400	-	-	-	AAA_15,SMC_N
BYD3_k127_7039761_2	1168034.FH5T_05680	6.024e-56	198.0	COG0245@1|root,COG0245@2|Bacteria,4NP0N@976|Bacteroidetes,2FNVA@200643|Bacteroidia	976|Bacteroidetes	H	Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP)	ispF	-	4.6.1.12	ko:K01770	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	M00096	R05637	RC00002,RC01440	ko00000,ko00001,ko00002,ko01000	-	-	-	YgbB
BYD3_k127_7039761_0	1168034.FH5T_05685	1.948e-184	584.0	COG2067@1|root,COG2067@2|Bacteria,4NDZW@976|Bacteroidetes,2FPVJ@200643|Bacteroidia	976|Bacteroidetes	I	Psort location OuterMembrane, score	porV	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_7039761_1	1168034.FH5T_05690	5.724e-125	409.0	COG1572@1|root,COG1572@2|Bacteria,4NDY7@976|Bacteroidetes,2FMIV@200643|Bacteroidia	976|Bacteroidetes	S	Peptidase family C25	porU	-	-	-	-	-	-	-	-	-	-	-	Peptidase_C25
BYD3_k127_7061525_3	1313421.JHBV01000029_gene2007	2.152e-43	160.0	2DBF0@1|root,2Z8VT@2|Bacteria,4NECW@976|Bacteroidetes	976|Bacteroidetes	S	Psort location CytoplasmicMembrane, score 10.00	-	-	1.3.1.22	ko:K12343	ko00140,map00140	-	R02208,R02497,R08954,R10242	RC00145	ko00000,ko00001,ko01000	-	-	-	Steroid_dh
BYD3_k127_7061525_2	1267211.KI669560_gene2543	1.748e-78	267.0	COG0586@1|root,COG0586@2|Bacteria,4NMPN@976|Bacteroidetes,1IWBE@117747|Sphingobacteriia	976|Bacteroidetes	S	SNARE associated Golgi protein	-	-	-	ko:K03975	-	-	-	-	ko00000	-	-	-	SNARE_assoc
BYD3_k127_7061525_1	760192.Halhy_6483	8.944e-116	381.0	COG1284@1|root,COG1284@2|Bacteria,4NG9F@976|Bacteroidetes,1IPVB@117747|Sphingobacteriia	976|Bacteroidetes	S	protein conserved in bacteria (DUF2179)	-	-	-	-	-	-	-	-	-	-	-	-	DUF2179,YitT_membrane
BYD3_k127_7061525_0	468059.AUHA01000006_gene2985	4.119e-184	586.0	COG0531@1|root,COG0531@2|Bacteria,4NJPZ@976|Bacteroidetes,1IRQU@117747|Sphingobacteriia	976|Bacteroidetes	E	Amino acid permease	-	-	-	ko:K03294	-	-	-	-	ko00000	2.A.3.2	-	-	AA_permease_2
BYD3_k127_7067365_2	760192.Halhy_2920	1.15e-71	256.0	COG1331@1|root,COG1331@2|Bacteria,4NMU8@976|Bacteroidetes,1IYIZ@117747|Sphingobacteriia	976|Bacteroidetes	O	Protein of unknown function, DUF255	-	-	-	-	-	-	-	-	-	-	-	-	Thioredoxin,Thioredoxin_7
BYD3_k127_7067365_0	760192.Halhy_6043	1.214e-205	661.0	COG0514@1|root,COG0514@2|Bacteria,4NG10@976|Bacteroidetes,1IQU0@117747|Sphingobacteriia	976|Bacteroidetes	L	RQC	recQ3	-	3.6.4.12	ko:K03654	ko03018,map03018	-	-	-	ko00000,ko00001,ko01000,ko03400	-	-	-	DEAD,HRDC,HTH_40,Helicase_C,RQC,RecQ_Zn_bind
BYD3_k127_7067365_1	1120965.AUBV01000008_gene1963	3.01e-158	501.0	COG0320@1|root,COG0320@2|Bacteria,4NEB5@976|Bacteroidetes,47JGZ@768503|Cytophagia	976|Bacteroidetes	H	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives	lipA	-	2.8.1.8	ko:K03644	ko00785,ko01100,map00785,map01100	-	R07767,R07768	RC01978	ko00000,ko00001,ko01000	-	-	-	LIAS_N,Radical_SAM
BYD3_k127_7068914_4	1173025.GEI7407_2055	3.071e-09	65.0	COG2931@1|root,COG2931@2|Bacteria,1G0ZC@1117|Cyanobacteria,1H8KD@1150|Oscillatoriales	1117|Cyanobacteria	Q	PFAM Hemolysin-type calcium-binding repeat (2 copies)	-	-	-	-	-	-	-	-	-	-	-	-	Beta_helix,Calx-beta,Chlam_PMP,DUF4347,HemolysinCabind
BYD3_k127_7068914_5	1122179.KB890466_gene624	4.221e-08	67.0	COG3209@1|root,COG3291@1|root,COG4932@1|root,COG3209@2|Bacteria,COG3291@2|Bacteria,COG4932@2|Bacteria	2|Bacteria	M	domain protein	-	-	-	-	-	-	-	-	-	-	-	-	CHU_C,Laminin_G_3,PKD,SprB
BYD3_k127_7068914_2	391596.PBAL39_19969	2.697e-45	169.0	COG1959@1|root,COG1959@2|Bacteria,4NY03@976|Bacteroidetes,1IXYJ@117747|Sphingobacteriia	976|Bacteroidetes	K	transcriptional regulator	-	-	-	-	-	-	-	-	-	-	-	-	Rrf2
BYD3_k127_7068914_3	641143.HMPREF9331_01841	6.472e-45	172.0	COG2166@1|root,COG2166@2|Bacteria,4NM9N@976|Bacteroidetes,1I187@117743|Flavobacteriia,1ES0J@1016|Capnocytophaga	976|Bacteroidetes	S	Fe-S metabolism associated domain protein	sufE	-	-	ko:K02426	-	-	-	-	ko00000	-	-	-	SufE
BYD3_k127_7068914_0	518766.Rmar_2025	3.421e-160	514.0	COG0520@1|root,COG0520@2|Bacteria,4NDUB@976|Bacteroidetes,1FJ5S@1100069|Bacteroidetes Order II. Incertae sedis	976|Bacteroidetes	E	Cys/Met metabolism PLP-dependent enzyme	sufS	-	2.8.1.7,4.4.1.16	ko:K11717	ko00450,ko01100,map00450,map01100	-	R03599,R11528	RC00961,RC01789,RC02313	ko00000,ko00001,ko01000	-	-	-	Aminotran_5
BYD3_k127_7068914_1	1122176.KB903541_gene169	5.539e-77	274.0	COG0719@1|root,COG0719@2|Bacteria,4NFPG@976|Bacteroidetes,1IQF5@117747|Sphingobacteriia	976|Bacteroidetes	O	FeS assembly protein SufD	sufD	-	-	ko:K09015	-	-	-	-	ko00000	-	-	-	UPF0051
BYD3_k127_7075998_1	1122176.KB903532_gene2613	2.684e-99	334.0	COG5002@1|root,COG5002@2|Bacteria,4NETP@976|Bacteroidetes,1IQ3E@117747|Sphingobacteriia	976|Bacteroidetes	T	Histidine kinase	phoR	-	2.7.13.3	ko:K07636	ko02020,map02020	M00434	-	-	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	-	-	-	HATPase_c,HisKA
BYD3_k127_7075998_3	760192.Halhy_0093	1.559e-39	152.0	COG2062@1|root,COG2062@2|Bacteria,4NQFM@976|Bacteroidetes,1ITFC@117747|Sphingobacteriia	976|Bacteroidetes	T	Phosphoglycerate mutase family	sixA	-	-	ko:K08296	-	-	-	-	ko00000,ko01000	-	-	-	His_Phos_1
BYD3_k127_7075998_2	935845.JADQ01000039_gene2378	5.401e-54	215.0	COG0637@1|root,COG0637@2|Bacteria,1UZE0@1239|Firmicutes,4HFTF@91061|Bacilli,26QP3@186822|Paenibacillaceae	91061|Bacilli	S	beta-phosphoglucomutase	-	-	5.4.2.6	ko:K01838	ko00500,map00500	-	R02728,R11310	RC00408	ko00000,ko00001,ko01000	-	-	-	HAD_2
BYD3_k127_7075998_0	1270196.JCKI01000005_gene3101	8.762e-197	627.0	COG1554@1|root,COG1554@2|Bacteria,4NFG1@976|Bacteroidetes,1IRII@117747|Sphingobacteriia	976|Bacteroidetes	G	phosphorylase	-	-	2.4.1.8	ko:K00691	ko00500,ko01100,map00500,map01100	-	R01555	RC00049	ko00000,ko00001,ko01000	-	GH65	-	Glyco_hydro_65C,Glyco_hydro_65N,Glyco_hydro_65m
BYD3_k127_707779_0	760192.Halhy_0989	2.715e-206	651.0	COG0018@1|root,COG0018@2|Bacteria,4NE7Q@976|Bacteroidetes,1IQGR@117747|Sphingobacteriia	976|Bacteroidetes	J	Arginyl-tRNA synthetase	argS	GO:0003674,GO:0003824,GO:0004812,GO:0004814,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006420,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576	6.1.1.19	ko:K01887	ko00970,map00970	M00359,M00360	R03646	RC00055,RC00523	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029	-	-	-	Arg_tRNA_synt_N,DALR_1,tRNA-synt_1d
BYD3_k127_707779_1	1122176.KB903598_gene4658	9.042e-190	600.0	COG0008@1|root,COG0008@2|Bacteria,4NFCC@976|Bacteroidetes	976|Bacteroidetes	J	Catalyzes a two-step reaction, first charging a glutamine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA	glnS	-	6.1.1.18	ko:K01886	ko00970,ko01100,map00970,map01100	M00359,M00360	R03652	RC00055,RC00523	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	-	-	-	tRNA-synt_1c,tRNA-synt_1c_C
BYD3_k127_7084053_1	926549.KI421517_gene828	2.005e-45	166.0	COG0662@1|root,COG0662@2|Bacteria,4NFU2@976|Bacteroidetes,47PIW@768503|Cytophagia	976|Bacteroidetes	G	Catalyzes the oxidative ring opening of 3- hydroxyanthranilate to 2-amino-3-carboxymuconate semialdehyde, which spontaneously cyclizes to quinolinate	nbaC	-	1.13.11.6	ko:K00452	ko00380,ko01100,map00380,map01100	M00038	R02665	RC00387	ko00000,ko00001,ko00002,ko01000	-	-	-	3-HAO
BYD3_k127_7084053_0	313598.MED152_12759	9.748e-137	448.0	COG0654@1|root,COG0654@2|Bacteria,4NGIU@976|Bacteroidetes,1HXAE@117743|Flavobacteriia,3VWA6@52959|Polaribacter	976|Bacteroidetes	CH	Catalyzes the hydroxylation of L-kynurenine (L-Kyn) to form 3-hydroxy-L-kynurenine (L-3OHKyn). Required for synthesis of quinolinic acid	kmo	-	1.14.13.9	ko:K00486	ko00380,ko01100,map00380,map01100	M00038	R01960	RC00046	ko00000,ko00001,ko00002,ko01000	-	-	-	FAD_binding_3
BYD3_k127_7084053_3	1392498.JQLH01000001_gene2597	2.074e-22	109.0	28IMM@1|root,2Z8N3@2|Bacteria,4NGS9@976|Bacteroidetes,1I05I@117743|Flavobacteriia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_7084053_2	1124780.ANNU01000023_gene3232	6.017e-40	156.0	COG0366@1|root,COG0366@2|Bacteria,4NEXF@976|Bacteroidetes,47MR6@768503|Cytophagia	976|Bacteroidetes	G	PFAM Alpha amylase, catalytic	-	GO:0000272,GO:0000287,GO:0001871,GO:0003674,GO:0003824,GO:0004553,GO:0004556,GO:0005488,GO:0005509,GO:0005575,GO:0005975,GO:0005976,GO:0005982,GO:0005983,GO:0006073,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009251,GO:0009987,GO:0016020,GO:0016052,GO:0016160,GO:0016787,GO:0016798,GO:0019867,GO:0030246,GO:0030247,GO:0043167,GO:0043169,GO:0043170,GO:0044042,GO:0044237,GO:0044238,GO:0044247,GO:0044248,GO:0044260,GO:0044262,GO:0044264,GO:0044275,GO:0046872,GO:0071704,GO:1901575,GO:2001070	3.2.1.1,3.2.1.133,3.2.1.135,3.2.1.54	ko:K01176,ko:K01208	ko00500,ko01100,ko04973,map00500,map01100,map04973	-	R02108,R02112,R03122,R11262	-	ko00000,ko00001,ko01000	-	GH13	-	Alpha-amylase,BACON,DUF3459
BYD3_k127_7097564_2	579137.Metvu_0067	1.143e-43	170.0	arCOG09746@1|root,arCOG09746@2157|Archaea,2Y4VG@28890|Euryarchaeota	28890|Euryarchaeota	S	Sulfotransferase domain	-	-	-	-	-	-	-	-	-	-	-	-	Sulfotransfer_1
BYD3_k127_7097564_1	330214.NIDE0740	6.486e-73	259.0	COG0438@1|root,COG0438@2|Bacteria	2|Bacteria	M	transferase activity, transferring glycosyl groups	-	-	-	-	-	-	-	-	-	-	-	-	Glyco_trans_1_4,Glyco_transf_4,Glycos_transf_1
BYD3_k127_7097564_3	1499967.BAYZ01000085_gene5181	3.667e-37	151.0	COG4424@1|root,COG4424@2|Bacteria	2|Bacteria	S	carbohydrate metabolic process	-	-	-	-	-	-	-	-	-	-	-	-	Sulfotransfer_1,Sulfotransfer_3
BYD3_k127_7097564_0	760192.Halhy_3100	1.227e-287	890.0	COG0488@1|root,COG0488@2|Bacteria,4NES5@976|Bacteroidetes,1IQQ4@117747|Sphingobacteriia	976|Bacteroidetes	S	ABC transporter	-	-	-	ko:K15738	-	-	-	-	ko00000,ko02000	3.A.1.120.6	-	-	ABC_tran,ABC_tran_Xtn
BYD3_k127_7097564_4	616991.JPOO01000001_gene3798	2.235e-12	74.0	COG5661@1|root,COG5661@2|Bacteria,4NW11@976|Bacteroidetes,1I32R@117743|Flavobacteriia,23ICJ@178469|Arenibacter	976|Bacteroidetes	O	secreted Zn-dependent protease	-	-	-	-	-	-	-	-	-	-	-	-	DUF922
BYD3_k127_7098752_0	985255.APHJ01000025_gene1126	1.007e-218	701.0	COG0793@1|root,COG0793@2|Bacteria,4NEK8@976|Bacteroidetes,1HYIK@117743|Flavobacteriia	976|Bacteroidetes	M	peptidase S41	-	-	-	-	-	-	-	-	-	-	-	-	Peptidase_S41
BYD3_k127_7098752_1	755732.Fluta_2787	1.246e-25	111.0	COG1943@1|root,COG1943@2|Bacteria,4NTCS@976|Bacteroidetes,1I4IA@117743|Flavobacteriia	976|Bacteroidetes	L	Transposase IS200 like	-	-	-	-	-	-	-	-	-	-	-	-	Y1_Tnp
BYD3_k127_7106020_5	1249997.JHZW01000003_gene2392	7.51e-73	260.0	COG0079@1|root,COG0079@2|Bacteria,4NEW8@976|Bacteroidetes,1HXQE@117743|Flavobacteriia,2PI2Y@252356|Maribacter	976|Bacteroidetes	E	Aminotransferase class-V	-	-	2.6.1.9	ko:K00817	ko00340,ko00350,ko00360,ko00400,ko00401,ko00960,ko01100,ko01110,ko01130,ko01230,map00340,map00350,map00360,map00400,map00401,map00960,map01100,map01110,map01130,map01230	M00026	R00694,R00734,R03243	RC00006,RC00888	ko00000,ko00001,ko00002,ko01000,ko01007	-	-	-	Aminotran_1_2
BYD3_k127_7106020_2	760192.Halhy_3086	6.845e-94	318.0	COG1044@1|root,COG1044@2|Bacteria,4NFXA@976|Bacteroidetes,1IVKB@117747|Sphingobacteriia	976|Bacteroidetes	M	glucosamine N-acyltransferase	lpxD1	-	2.3.1.191	ko:K02536	ko00540,ko01100,map00540,map01100	M00060	R04550	RC00039,RC00166	ko00000,ko00001,ko00002,ko01000,ko01005	-	-	-	Hexapep,Hexapep_2,LpxD
BYD3_k127_7106020_4	1313421.JHBV01000041_gene3493	2.882e-84	283.0	COG1225@1|root,COG1225@2|Bacteria,4NMET@976|Bacteroidetes,1J106@117747|Sphingobacteriia	976|Bacteroidetes	O	Redoxin	-	-	-	-	-	-	-	-	-	-	-	-	AhpC-TSA
BYD3_k127_7106020_3	760192.Halhy_2029	1.566e-87	297.0	COG1876@1|root,COG1876@2|Bacteria,4NFA4@976|Bacteroidetes	976|Bacteroidetes	M	D-alanyl-D-alanine carboxypeptidase	vanY	-	-	-	-	-	-	-	-	-	-	-	VanY
BYD3_k127_7106020_7	1122176.KB903532_gene2731	4.231e-41	153.0	COG3460@1|root,COG3460@2|Bacteria,4NQFV@976|Bacteroidetes,1IYP8@117747|Sphingobacteriia	976|Bacteroidetes	Q	Phenylacetic acid degradation B	paaB	-	-	ko:K02610	ko00360,ko01120,map00360,map01120	-	R09838	RC02690	ko00000,ko00001	-	-	-	PaaB
BYD3_k127_7106020_0	1267211.KI669560_gene742	3.114e-166	526.0	COG3396@1|root,COG3396@2|Bacteria,4NFJN@976|Bacteroidetes,1IVIY@117747|Sphingobacteriia	976|Bacteroidetes	S	Phenylacetic acid catabolic protein	paaA	-	1.14.13.149	ko:K02609	ko00360,ko01120,map00360,map01120	-	R09838	RC02690	ko00000,ko00001,ko01000	-	-	-	PaaA_PaaC
BYD3_k127_7106020_6	1122176.KB903532_gene2700	6.932e-44	166.0	COG1309@1|root,COG1309@2|Bacteria,4NMN2@976|Bacteroidetes,1IYNI@117747|Sphingobacteriia	976|Bacteroidetes	K	Transcriptional regulator, TetR family	-	-	-	-	-	-	-	-	-	-	-	-	TetR_C_4,TetR_C_5,TetR_N
BYD3_k127_7106020_1	760192.Halhy_3786	3.693e-104	349.0	COG1018@1|root,COG1018@2|Bacteria,4NF24@976|Bacteroidetes,1IWHK@117747|Sphingobacteriia	976|Bacteroidetes	C	Oxidoreductase FAD-binding domain	paaE	-	-	ko:K02613	ko00360,ko01120,map00360,map01120	-	R09838	RC02690	ko00000,ko00001	-	-	-	FAD_binding_6,Fer2,NAD_binding_1
BYD3_k127_71279_1	1120965.AUBV01000003_gene611	2.728e-57	203.0	COG2273@1|root,COG2273@2|Bacteria,4NHP5@976|Bacteroidetes,47NAB@768503|Cytophagia	976|Bacteroidetes	G	Glycosyl hydrolases family 16	-	-	-	-	-	-	-	-	-	-	-	-	Glyco_hydro_16
BYD3_k127_71279_0	1123248.KB893328_gene922	1.344e-159	511.0	COG3239@1|root,COG3239@2|Bacteria,4NERD@976|Bacteroidetes,1IW53@117747|Sphingobacteriia	976|Bacteroidetes	I	Fatty acid desaturase	-	-	1.14.19.3	ko:K00508	ko00591,ko01100,map00591,map01100	-	R07063	RC00917	ko00000,ko00001,ko01000,ko01004	-	-	-	FA_desaturase
BYD3_k127_7135153_0	700598.Niako_6229	1.536e-114	382.0	COG3291@1|root,COG3291@2|Bacteria,4NJYT@976|Bacteroidetes,1IXGM@117747|Sphingobacteriia	976|Bacteroidetes	S	PKD domain containing protein	-	-	-	-	-	-	-	-	-	-	-	-	CHU_C,PKD
BYD3_k127_7135153_1	379066.GAU_3242	1.161e-50	187.0	COG0666@1|root,COG0666@2|Bacteria,1ZV8V@142182|Gemmatimonadetes	142182|Gemmatimonadetes	S	Ankyrin repeat	-	-	-	-	-	-	-	-	-	-	-	-	Ank_4
BYD3_k127_7142203_1	879243.Poras_0672	6.54e-10	62.0	COG2348@1|root,COG2348@2|Bacteria	2|Bacteria	V	transferase activity, transferring amino-acyl groups	-	-	-	-	-	-	-	-	-	-	-	-	Acetyltransf_6
BYD3_k127_7142203_0	504487.JCM19302_2167	1.565e-135	447.0	COG5267@1|root,COG5267@2|Bacteria,4NJBN@976|Bacteroidetes,1I0QW@117743|Flavobacteriia	976|Bacteroidetes	S	Protein of unknown function (DUF1800)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1800
BYD3_k127_7156540_1	1122176.KB903531_gene2783	6.519e-133	432.0	COG1605@1|root,COG2876@1|root,COG1605@2|Bacteria,COG2876@2|Bacteria,4NDU4@976|Bacteroidetes,1IQIZ@117747|Sphingobacteriia	976|Bacteroidetes	E	Dahp synthetase i kdsa	pheB	-	5.4.99.5	ko:K04516	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	M00024,M00025	R01715	RC03116	ko00000,ko00001,ko00002,ko01000	-	-	-	CM_2,DAHP_synth_1
BYD3_k127_7156540_2	1071073.KI530544_gene2887	1.24e-23	112.0	COG3064@1|root,COG3064@2|Bacteria,1VB1V@1239|Firmicutes,4HAX3@91061|Bacilli,1ZG4E@1386|Bacillus	91061|Bacilli	M	Psort location Cytoplasmic, score	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_7156540_0	509635.N824_09630	2.157e-144	470.0	COG2986@1|root,COG2986@2|Bacteria,4NE0D@976|Bacteroidetes,1INMG@117747|Sphingobacteriia	976|Bacteroidetes	E	Histidine ammonia-lyase	hutH	-	4.3.1.3	ko:K01745	ko00340,ko01100,map00340,map01100	M00045	R01168	RC00361	ko00000,ko00001,ko00002,ko01000	-	-	-	Lyase_aromatic
BYD3_k127_7157324_1	1124780.ANNU01000023_gene3232	1.53e-101	337.0	COG0366@1|root,COG0366@2|Bacteria,4NEXF@976|Bacteroidetes,47MR6@768503|Cytophagia	976|Bacteroidetes	G	PFAM Alpha amylase, catalytic	-	GO:0000272,GO:0000287,GO:0001871,GO:0003674,GO:0003824,GO:0004553,GO:0004556,GO:0005488,GO:0005509,GO:0005575,GO:0005975,GO:0005976,GO:0005982,GO:0005983,GO:0006073,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009251,GO:0009987,GO:0016020,GO:0016052,GO:0016160,GO:0016787,GO:0016798,GO:0019867,GO:0030246,GO:0030247,GO:0043167,GO:0043169,GO:0043170,GO:0044042,GO:0044237,GO:0044238,GO:0044247,GO:0044248,GO:0044260,GO:0044262,GO:0044264,GO:0044275,GO:0046872,GO:0071704,GO:1901575,GO:2001070	3.2.1.1,3.2.1.133,3.2.1.135,3.2.1.54	ko:K01176,ko:K01208	ko00500,ko01100,ko04973,map00500,map01100,map04973	-	R02108,R02112,R03122,R11262	-	ko00000,ko00001,ko01000	-	GH13	-	Alpha-amylase,BACON,DUF3459
BYD3_k127_7157324_2	1461577.CCMH01000008_gene2221	1.047e-47	176.0	COG5654@1|root,COG5654@2|Bacteria,4NQ91@976|Bacteroidetes,1I2JH@117743|Flavobacteriia	976|Bacteroidetes	S	PFAM RES domain	-	-	-	-	-	-	-	-	-	-	-	-	RES
BYD3_k127_7157324_3	714943.Mucpa_4223	7.059e-39	150.0	COG5642@1|root,COG5642@2|Bacteria,4NT6I@976|Bacteroidetes	976|Bacteroidetes	S	Protein of unknown function (DUF2384)	-	-	-	-	-	-	-	-	-	-	-	-	DUF2384
BYD3_k127_7157324_0	1122226.AUHX01000003_gene323	9.135e-169	539.0	COG3844@1|root,COG3844@2|Bacteria,4NECS@976|Bacteroidetes,1HWY8@117743|Flavobacteriia	976|Bacteroidetes	E	Catalyzes the cleavage of L-kynurenine (L-Kyn) and L-3- hydroxykynurenine (L-3OHKyn) into anthranilic acid (AA) and 3- hydroxyanthranilic acid (3-OHAA), respectively	kynU	-	3.7.1.3	ko:K01556	ko00380,ko01100,map00380,map01100	M00038	R00987,R02668,R03936	RC00284,RC00415	ko00000,ko00001,ko00002,ko01000	-	-	-	Aminotran_5
BYD3_k127_7157324_4	880071.Fleli_0540	1.256e-16	80.0	COG2159@1|root,COG2159@2|Bacteria,4NIGJ@976|Bacteroidetes,47KJH@768503|Cytophagia	976|Bacteroidetes	S	Amidohydrolase	-	-	4.1.1.45	ko:K03392	ko00380,ko01100,map00380,map01100	M00038	R04323	RC00779	ko00000,ko00001,ko00002,ko01000	-	-	-	Amidohydro_2
BYD3_k127_7165897_9	391598.FBBAL38_06115	1.268e-09	64.0	COG2133@1|root,COG2133@2|Bacteria,4NF0B@976|Bacteroidetes,1HX9D@117743|Flavobacteriia	976|Bacteroidetes	G	Glucose / Sorbosone dehydrogenase	-	-	-	-	-	-	-	-	-	-	-	-	CBM_6,GSDH
BYD3_k127_7165897_4	1380384.JADN01000007_gene1668	1.1e-82	281.0	COG0053@1|root,COG0053@2|Bacteria,4NJRM@976|Bacteroidetes,1HXI5@117743|Flavobacteriia	976|Bacteroidetes	P	Cation efflux family	-	-	-	-	-	-	-	-	-	-	-	-	Cation_efflux
BYD3_k127_7165897_8	1484460.JSWG01000003_gene765	6.875e-15	79.0	2BYV9@1|root,32X8F@2|Bacteria,4NTFV@976|Bacteroidetes,1I4SC@117743|Flavobacteriia	976|Bacteroidetes	S	Lipocalin-like domain	-	-	-	-	-	-	-	-	-	-	-	-	Lipocalin_4
BYD3_k127_7165897_5	1492737.FEM08_05200	3.78e-52	190.0	COG1418@1|root,COG1418@2|Bacteria,4NFAG@976|Bacteroidetes,1I40V@117743|Flavobacteriia,2NXF8@237|Flavobacterium	976|Bacteroidetes	S	Metal dependent phosphohydrolases with conserved 'HD' motif.	-	-	-	-	-	-	-	-	-	-	-	-	Guanylate_cyc,HD
BYD3_k127_7165897_1	865937.Gilli_2337	2.09e-107	356.0	COG1284@1|root,COG1284@2|Bacteria,4NG9F@976|Bacteroidetes,1HY56@117743|Flavobacteriia,2P7B9@244698|Gillisia	976|Bacteroidetes	S	Uncharacterized protein conserved in bacteria (DUF2179)	-	-	-	-	-	-	-	-	-	-	-	-	DUF2179,YitT_membrane
BYD3_k127_7165897_7	1123276.KB893290_gene5211	1.275e-16	87.0	2DR38@1|root,339ZC@2|Bacteria,4NY0S@976|Bacteroidetes	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_7165897_2	1123276.KB893301_gene4324	5.908e-107	377.0	COG1044@1|root,COG5295@1|root,COG1044@2|Bacteria,COG5295@2|Bacteria,4NMJW@976|Bacteroidetes,47XBE@768503|Cytophagia	976|Bacteroidetes	UW	Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell	-	-	-	-	-	-	-	-	-	-	-	-	DUF1566,Peptidase_S74
BYD3_k127_7165897_0	1408433.JHXV01000017_gene1551	8.246e-152	491.0	COG1680@1|root,COG1680@2|Bacteria,4NGND@976|Bacteroidetes,1HWQE@117743|Flavobacteriia,2PA9A@246874|Cryomorphaceae	976|Bacteroidetes	V	Beta-lactamase	-	-	-	-	-	-	-	-	-	-	-	-	Beta-lactamase
BYD3_k127_7165897_6	867900.Celly_0146	2.51e-17	97.0	COG2356@1|root,COG2374@1|root,COG2356@2|Bacteria,COG2374@2|Bacteria,4NEGS@976|Bacteroidetes,1HWRI@117743|Flavobacteriia,1F8C5@104264|Cellulophaga	976|Bacteroidetes	L	COGs COG2356 Endonuclease I	-	-	-	-	-	-	-	-	-	-	-	-	Calx-beta,Endonuclease_1,LTD,SprB,fn3
BYD3_k127_7165897_3	1122176.KB903587_gene4485	3.778e-98	352.0	COG1361@1|root,COG4412@1|root,COG1361@2|Bacteria,COG4412@2|Bacteria,4PPP2@976|Bacteroidetes,1IZ5Q@117747|Sphingobacteriia	976|Bacteroidetes	M	Conserved repeat domain	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_7179281_4	926562.Oweho_0521	8.173e-81	284.0	COG3055@1|root,COG3055@2|Bacteria,4NG50@976|Bacteroidetes,1HY2Q@117743|Flavobacteriia,2PBZ4@246874|Cryomorphaceae	976|Bacteroidetes	S	PFAM Kelch motif	-	-	-	-	-	-	-	-	-	-	-	-	Kelch_1,Kelch_3,Kelch_4,Kelch_6
BYD3_k127_7179281_5	926549.KI421517_gene3628	2.473e-77	268.0	COG3568@1|root,COG3568@2|Bacteria,4NHXV@976|Bacteroidetes,47NJC@768503|Cytophagia	976|Bacteroidetes	S	PFAM Endonuclease Exonuclease phosphatase	-	-	-	-	-	-	-	-	-	-	-	-	Exo_endo_phos
BYD3_k127_7179281_1	1121104.AQXH01000007_gene449	8.452e-105	354.0	2DKXC@1|root,30RJ8@2|Bacteria,4NJDT@976|Bacteroidetes,1IWNG@117747|Sphingobacteriia	976|Bacteroidetes	S	Paraquat-inducible protein A	-	-	-	-	-	-	-	-	-	-	-	-	PqiA
BYD3_k127_7179281_3	1122176.KB903542_gene337	4.896e-86	302.0	COG4775@1|root,COG4775@2|Bacteria,4NF9Y@976|Bacteroidetes,1IWQ4@117747|Sphingobacteriia	976|Bacteroidetes	M	COG4775 Outer membrane protein protective antigen OMA87	-	-	-	-	-	-	-	-	-	-	-	-	Bac_surface_Ag,POTRA
BYD3_k127_7179281_6	760192.Halhy_3171	8.947e-69	239.0	COG0517@1|root,COG0517@2|Bacteria,4NF8G@976|Bacteroidetes,1IRUD@117747|Sphingobacteriia	976|Bacteroidetes	S	CBS domain	-	-	-	-	-	-	-	-	-	-	-	-	CBS
BYD3_k127_7179281_7	760192.Halhy_3172	9.958e-63	225.0	COG0457@1|root,COG2314@1|root,COG0457@2|Bacteria,COG2314@2|Bacteria,4NW91@976|Bacteroidetes	976|Bacteroidetes	S	TM2 domain	-	-	-	-	-	-	-	-	-	-	-	-	SHOCT,TM2,TPR_11
BYD3_k127_7179281_0	760192.Halhy_3173	4.442e-118	392.0	COG2208@1|root,COG2208@2|Bacteria,4NI98@976|Bacteroidetes,1IR5G@117747|Sphingobacteriia	976|Bacteroidetes	KT	Serine phosphatase RsbU regulator of sigma subunit	-	-	3.1.3.3	ko:K07315	-	-	-	-	ko00000,ko01000,ko03021	-	-	-	SpoIIE
BYD3_k127_7179281_2	1122176.KB903534_gene2150	1.241e-100	340.0	COG0795@1|root,COG0795@2|Bacteria,4NF8Y@976|Bacteroidetes,1IPXP@117747|Sphingobacteriia	976|Bacteroidetes	S	Permease, YjgP YjgQ family	lptG	-	-	ko:K11720	ko02010,map02010	M00320	-	-	ko00000,ko00001,ko00002,ko02000	1.B.42.1	-	-	YjgP_YjgQ
BYD3_k127_7179281_8	760192.Halhy_2005	2.162e-37	144.0	COG1663@1|root,COG1663@2|Bacteria,4NE2I@976|Bacteroidetes,1IQ8A@117747|Sphingobacteriia	976|Bacteroidetes	M	Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1- P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA)	lpxK	-	2.7.1.130	ko:K00912	ko00540,ko01100,map00540,map01100	M00060	R04657	RC00002,RC00078	ko00000,ko00001,ko00002,ko01000,ko01005	-	-	-	LpxK
BYD3_k127_7190009_1	761193.Runsl_1765	1.31e-37	146.0	COG2352@1|root,COG2352@2|Bacteria,4NFC0@976|Bacteroidetes,47NF0@768503|Cytophagia	976|Bacteroidetes	C	Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle	ppc	-	4.1.1.31	ko:K01595	ko00620,ko00680,ko00710,ko00720,ko01100,ko01120,ko01200,map00620,map00680,map00710,map00720,map01100,map01120,map01200	M00168,M00170,M00171,M00172,M00173,M00346,M00374	R00345	RC02741	ko00000,ko00001,ko00002,ko01000	-	-	-	PEPcase
BYD3_k127_7190009_0	1121897.AUGO01000001_gene1602	1.145e-218	704.0	COG1629@1|root,COG1629@2|Bacteria,4P4MW@976|Bacteroidetes,1HY9W@117743|Flavobacteriia,2P02C@237|Flavobacterium	976|Bacteroidetes	P	Outer membrane protein beta-barrel family	-	-	-	-	-	-	-	-	-	-	-	-	CarbopepD_reg_2,CarboxypepD_reg,OMP_b-brl_3,Plug
BYD3_k127_7208202_2	760192.Halhy_4776	1.862e-80	273.0	COG0505@1|root,COG0505@2|Bacteria,4NEQI@976|Bacteroidetes,1IPSN@117747|Sphingobacteriia	976|Bacteroidetes	F	Belongs to the CarA family	carA	-	6.3.5.5	ko:K01956	ko00240,ko00250,ko01100,map00240,map00250,map01100	M00051	R00256,R00575,R01395,R10948,R10949	RC00002,RC00010,RC00043,RC02750,RC02798,RC03314	ko00000,ko00001,ko00002,ko01000	-	-	-	CPSase_sm_chain,GATase
BYD3_k127_7208202_5	1122176.KB903535_gene1926	3.499e-53	192.0	COG0203@1|root,COG0203@2|Bacteria,4NNW0@976|Bacteroidetes,1IRYB@117747|Sphingobacteriia	976|Bacteroidetes	J	Ribosomal protein L17	rplQ	GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904	-	ko:K02879	ko03010,map03010	M00178	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_L17
BYD3_k127_7208202_0	760192.Halhy_4768	8.586e-173	546.0	COG0202@1|root,COG0202@2|Bacteria,4NE8W@976|Bacteroidetes,1IQ3D@117747|Sphingobacteriia	976|Bacteroidetes	K	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates	rpoA	GO:0003674,GO:0003824,GO:0003899,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006351,GO:0006354,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0032774,GO:0034062,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0097659,GO:0097747,GO:0140098,GO:1901360,GO:1901362,GO:1901576	2.7.7.6	ko:K03040	ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020	M00183	R00435,R00441,R00442,R00443	RC02795	br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400	-	-	-	RNA_pol_A_CTD,RNA_pol_A_bac,RNA_pol_L
BYD3_k127_7208202_3	1122176.KB903535_gene1928	4.492e-77	261.0	COG0522@1|root,COG0522@2|Bacteria,4NEMZ@976|Bacteroidetes,1INSQ@117747|Sphingobacteriia	976|Bacteroidetes	J	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit	rpsD	GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006417,GO:0006450,GO:0008150,GO:0009889,GO:0009891,GO:0009893,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010608,GO:0010628,GO:0015935,GO:0019222,GO:0019843,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0032268,GO:0032270,GO:0032991,GO:0034248,GO:0034250,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0045727,GO:0045903,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051171,GO:0051173,GO:0051246,GO:0051247,GO:0060255,GO:0065007,GO:0065008,GO:0080090,GO:0097159,GO:1901363,GO:1990904,GO:2000112	-	ko:K02986	ko03010,map03010	M00178,M00179	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_S4,S4
BYD3_k127_7208202_4	760192.Halhy_4766	7.594e-57	200.0	COG0100@1|root,COG0100@2|Bacteria,4NNHA@976|Bacteroidetes,1ISSN@117747|Sphingobacteriia	976|Bacteroidetes	J	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome	rpsK	GO:0000028,GO:0000462,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006139,GO:0006364,GO:0006396,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0016070,GO:0016072,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0030490,GO:0032991,GO:0034470,GO:0034622,GO:0034641,GO:0034645,GO:0034660,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046483,GO:0048027,GO:0065003,GO:0070181,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904	-	ko:K02948	ko03010,map03010	M00178,M00179	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_S11
BYD3_k127_7208202_6	760192.Halhy_4765	8.513e-53	188.0	COG0099@1|root,COG0099@2|Bacteria,4NNGZ@976|Bacteroidetes,1ISH0@117747|Sphingobacteriia	976|Bacteroidetes	J	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits	rpsM	GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022613,GO:0032991,GO:0034641,GO:0034645,GO:0042254,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:0071840,GO:1901564,GO:1901566,GO:1901576,GO:1990904	-	ko:K02952	ko03010,map03010	M00178,M00179	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_S13
BYD3_k127_7208202_8	1216967.L100_01813	9.52e-16	76.0	COG0257@1|root,COG0257@2|Bacteria,4NXGE@976|Bacteroidetes,1I6A2@117743|Flavobacteriia	976|Bacteroidetes	J	Belongs to the bacterial ribosomal protein bL36 family	rpmJ	-	-	ko:K02919	ko03010,map03010	M00178	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_L36
BYD3_k127_7208202_7	760192.Halhy_4764	1.062e-35	136.0	COG0361@1|root,COG0361@2|Bacteria,4NS6S@976|Bacteroidetes,1IT95@117747|Sphingobacteriia	976|Bacteroidetes	J	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex	infA	GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0043021,GO:0043022,GO:0044424,GO:0044444,GO:0044464,GO:0044877	-	ko:K02518	-	-	-	-	ko00000,ko03012	-	-	-	eIF-1a
BYD3_k127_7208202_1	929556.Solca_3006	8.372e-82	276.0	COG0024@1|root,COG0024@2|Bacteria,4NERQ@976|Bacteroidetes,1IP59@117747|Sphingobacteriia	976|Bacteroidetes	J	Methionine aminopeptidase	map	-	3.4.11.18	ko:K01265	-	-	-	-	ko00000,ko01000,ko01002	-	-	-	Peptidase_M24
BYD3_k127_7208967_1	1122176.KB903532_gene2694	8.615e-168	533.0	COG0045@1|root,COG0045@2|Bacteria,4NFHA@976|Bacteroidetes,1IQ0Q@117747|Sphingobacteriia	976|Bacteroidetes	C	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit	sucC	-	6.2.1.5	ko:K01903	ko00020,ko00640,ko00660,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00640,map00660,map00720,map01100,map01110,map01120,map01130,map01200	M00009,M00011,M00173,M00374,M00620	R00405,R02404	RC00004,RC00014	ko00000,ko00001,ko00002,ko01000	-	-	-	ATP-grasp_2,Ligase_CoA
BYD3_k127_7208967_0	1313421.JHBV01000015_gene5768	3.58e-239	758.0	COG1331@1|root,COG1331@2|Bacteria,4NFE2@976|Bacteroidetes,1IQ72@117747|Sphingobacteriia	976|Bacteroidetes	O	COG1331 Highly conserved protein containing a thioredoxin domain	-	-	-	ko:K06888	-	-	-	-	ko00000	-	-	-	GlcNAc_2-epim,Glyco_hydro_9,Thioredox_DsbH
BYD3_k127_7208967_2	1227739.Hsw_0013	4.078e-78	271.0	COG0460@1|root,COG0527@1|root,COG0460@2|Bacteria,COG0527@2|Bacteria,4NFGR@976|Bacteroidetes,47KEQ@768503|Cytophagia	976|Bacteroidetes	E	TIGRFAM Aspartate kinase	thrA	-	1.1.1.3,2.7.2.4	ko:K12524	ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01230	M00016,M00017,M00018,M00526,M00527	R00480,R01773,R01775	RC00002,RC00043,RC00087	ko00000,ko00001,ko00002,ko01000	-	-	-	AA_kinase,ACT,ACT_7,Homoserine_dh,NAD_binding_3
BYD3_k127_7224275_15	760192.Halhy_4165	1.036e-07	53.0	COG0462@1|root,COG0462@2|Bacteria,4NEVF@976|Bacteroidetes,1INUM@117747|Sphingobacteriia	976|Bacteroidetes	EF	Ribose-phosphate pyrophosphokinase	prs	-	2.7.6.1	ko:K00948	ko00030,ko00230,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00230,map01100,map01110,map01120,map01130,map01200,map01230	M00005	R01049	RC00002,RC00078	ko00000,ko00001,ko00002,ko01000	-	-	-	Pribosyl_synth,Pribosyltran_N
BYD3_k127_7224275_13	1168034.FH5T_14805	3.735e-10	64.0	COG0640@1|root,COG0640@2|Bacteria,4NQK3@976|Bacteroidetes,2FT4U@200643|Bacteroidia	976|Bacteroidetes	K	Psort location Cytoplasmic, score 8.96	-	-	-	-	-	-	-	-	-	-	-	-	HTH_20,HTH_5
BYD3_k127_7224275_7	1122179.KB890491_gene4491	1.021e-52	194.0	COG1825@1|root,COG1825@2|Bacteria,4NEN6@976|Bacteroidetes,1IST6@117747|Sphingobacteriia	976|Bacteroidetes	J	This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance	ctc	GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008097,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904	-	ko:K02897	ko03010,map03010	M00178	-	-	ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_L25p,Ribosomal_TL5_C
BYD3_k127_7224275_5	1249975.JQLP01000001_gene3098	1.213e-80	276.0	COG0388@1|root,COG0388@2|Bacteria,4NE37@976|Bacteroidetes,1HXV8@117743|Flavobacteriia,2P5EJ@244698|Gillisia	976|Bacteroidetes	S	Carbon-nitrogen hydrolase	yafV	-	3.5.1.3	ko:K13566	ko00250,map00250	-	R00269,R00348	RC00010	ko00000,ko00001,ko01000	-	-	-	CN_hydrolase
BYD3_k127_7224275_8	1313421.JHBV01000016_gene5400	7.326e-30	126.0	COG0791@1|root,COG0791@2|Bacteria,4NUNS@976|Bacteroidetes,1ITXU@117747|Sphingobacteriia	976|Bacteroidetes	M	COGs COG0791 Cell wall-associated hydrolase (invasion-associated protein)	-	-	-	-	-	-	-	-	-	-	-	-	NLPC_P60
BYD3_k127_7224275_10	1122179.KB890416_gene2683	4.46e-23	103.0	COG2940@1|root,COG2940@2|Bacteria	2|Bacteria	K	SET domain	CP_0991	-	-	ko:K07117	-	-	-	-	ko00000	-	-	-	SET
BYD3_k127_7224275_6	1107311.Q767_07135	2.048e-57	210.0	COG0697@1|root,COG0697@2|Bacteria,4NEHX@976|Bacteroidetes,1HYA2@117743|Flavobacteriia,2NTXG@237|Flavobacterium	976|Bacteroidetes	EG	EamA-like transporter family	fjo11	-	-	-	-	-	-	-	-	-	-	-	EamA
BYD3_k127_7224275_1	760192.Halhy_4130	1.221e-167	536.0	COG2355@1|root,COG2355@2|Bacteria,4NEBG@976|Bacteroidetes,1IQAA@117747|Sphingobacteriia	976|Bacteroidetes	E	Membrane dipeptidase (Peptidase family M19)	-	-	3.4.13.19	ko:K01273	-	-	-	-	ko00000,ko00537,ko01000,ko01002,ko04147	-	-	-	Peptidase_M19
BYD3_k127_7224275_0	1121288.AULL01000015_gene186	2.06e-268	841.0	COG1793@1|root,COG3285@1|root,COG1793@2|Bacteria,COG3285@2|Bacteria,4NESR@976|Bacteroidetes,1HYT4@117743|Flavobacteriia,3ZTA3@59732|Chryseobacterium	976|Bacteroidetes	L	DNA polymerase Ligase (LigD)	-	-	6.5.1.1	ko:K01971	ko03450,map03450	-	R00381	RC00005	ko00000,ko00001,ko01000,ko03400	-	-	-	DNA_ligase_A_C,DNA_ligase_A_M,LigD_N
BYD3_k127_7224275_4	391596.PBAL39_16896	4.975e-88	296.0	COG1793@1|root,COG3285@1|root,COG1793@2|Bacteria,COG3285@2|Bacteria,4NESR@976|Bacteroidetes,1IQI9@117747|Sphingobacteriia	976|Bacteroidetes	L	DNA ligase	-	-	6.5.1.1	ko:K01971	ko03450,map03450	-	R00381	RC00005	ko00000,ko00001,ko01000,ko03400	-	-	-	DNA_ligase_A_C,DNA_ligase_A_M,LigD_N
BYD3_k127_7224275_3	485918.Cpin_0997	1.032e-101	337.0	COG1273@1|root,COG1273@2|Bacteria,4NHHQ@976|Bacteroidetes,1IR53@117747|Sphingobacteriia	976|Bacteroidetes	L	With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD	ku	-	-	ko:K10979	ko03450,map03450	-	-	-	ko00000,ko00001,ko03400	-	-	-	Ku
BYD3_k127_7224275_9	929556.Solca_4016	3.572e-29	123.0	COG2827@1|root,COG2827@2|Bacteria,4NUN3@976|Bacteroidetes,1IUCP@117747|Sphingobacteriia	976|Bacteroidetes	L	PFAM Excinuclease ABC, C subunit	-	-	-	ko:K07461	-	-	-	-	ko00000	-	-	-	GIY-YIG
BYD3_k127_7224275_2	929713.NIASO_04310	2.144e-107	352.0	COG0217@1|root,COG0217@2|Bacteria,4NE8Y@976|Bacteroidetes,1IQCX@117747|Sphingobacteriia	976|Bacteroidetes	K	transcriptional regulatory protein	yebC	GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464	-	-	-	-	-	-	-	-	-	-	Transcrip_reg
BYD3_k127_7224275_11	1336803.PHEL49_1462	2.281e-17	93.0	COG3595@1|root,COG3595@2|Bacteria,4NSAQ@976|Bacteroidetes,1I1B3@117743|Flavobacteriia,3VW6J@52959|Polaribacter	976|Bacteroidetes	S	Putative auto-transporter adhesin, head GIN domain	-	-	-	-	-	-	-	-	-	-	-	-	DUF2807
BYD3_k127_7224275_12	755732.Fluta_0088	2.202e-10	66.0	COG0457@1|root,COG0457@2|Bacteria,4NI5H@976|Bacteroidetes,1I5EH@117743|Flavobacteriia	976|Bacteroidetes	S	Tetratricopeptide repeat	-	-	-	-	-	-	-	-	-	-	-	-	TPR_1,TPR_2,TPR_8
BYD3_k127_7249005_0	1123057.P872_16690	7.439e-77	261.0	COG1235@1|root,COG1235@2|Bacteria,4NM16@976|Bacteroidetes,47U32@768503|Cytophagia	976|Bacteroidetes	S	Beta-lactamase superfamily domain	-	-	-	-	-	-	-	-	-	-	-	-	Lactamase_B_2
BYD3_k127_7249005_5	1122621.ATZA01000039_gene2595	0.0003512	47.0	COG1835@1|root,COG1835@2|Bacteria,4NHPE@976|Bacteroidetes,1IP2D@117747|Sphingobacteriia	976|Bacteroidetes	I	Acyltransferase family	-	-	-	ko:K11941	-	-	-	-	ko00000,ko01000	-	-	-	Acyl_transf_3
BYD3_k127_7249005_4	1122621.ATZA01000039_gene2595	0.0001777	46.0	COG1835@1|root,COG1835@2|Bacteria,4NHPE@976|Bacteroidetes,1IP2D@117747|Sphingobacteriia	976|Bacteroidetes	I	Acyltransferase family	-	-	-	ko:K11941	-	-	-	-	ko00000,ko01000	-	-	-	Acyl_transf_3
BYD3_k127_7249005_2	153721.MYP_1109	1.744e-44	165.0	COG1278@1|root,COG1278@2|Bacteria,4NNNH@976|Bacteroidetes,47QKE@768503|Cytophagia	976|Bacteroidetes	K	Cold shock protein domain	cspG	-	-	-	-	-	-	-	-	-	-	-	CSD
BYD3_k127_7249005_3	714943.Mucpa_5062	1.324e-12	72.0	2EC83@1|root,3366K@2|Bacteria,4NWPR@976|Bacteroidetes,1ITW7@117747|Sphingobacteriia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_7249005_1	1123234.AUKI01000011_gene1304	3.134e-75	259.0	COG0513@1|root,COG0513@2|Bacteria,4NEVI@976|Bacteroidetes,1HXIJ@117743|Flavobacteriia	976|Bacteroidetes	L	Belongs to the DEAD box helicase family	rhlE	-	3.6.4.13	ko:K11927	ko03018,map03018	-	-	-	ko00000,ko00001,ko01000,ko03019	-	-	-	DEAD,Helicase_C
BYD3_k127_7254751_0	485918.Cpin_4853	3.484e-157	508.0	COG2204@1|root,COG2204@2|Bacteria,4NE89@976|Bacteroidetes	976|Bacteroidetes	T	COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains	-	-	-	-	-	-	-	-	-	-	-	-	HTH_8,Response_reg,Sigma54_activat
BYD3_k127_7254751_1	1123278.KB893550_gene5067	2.595e-141	476.0	COG0457@1|root,COG3920@1|root,COG0457@2|Bacteria,COG3920@2|Bacteria,4NINT@976|Bacteroidetes,47JHQ@768503|Cytophagia	976|Bacteroidetes	T	ATP-binding region ATPase domain protein	-	-	-	-	-	-	-	-	-	-	-	-	HATPase_c,HATPase_c_2,HisKA_2,TPR_10,TPR_12,TPR_7,TPR_8
BYD3_k127_7254751_3	1453498.LG45_02760	1.037e-83	285.0	COG0596@1|root,COG0596@2|Bacteria,4NJQ8@976|Bacteroidetes,1I8JH@117743|Flavobacteriia,2NUPE@237|Flavobacterium	976|Bacteroidetes	S	Alpha/beta hydrolase family	-	-	-	-	-	-	-	-	-	-	-	-	Abhydrolase_6
BYD3_k127_7254751_2	1185876.BN8_02680	2.401e-104	344.0	COG2267@1|root,COG2267@2|Bacteria,4NJUN@976|Bacteroidetes,47XKM@768503|Cytophagia	976|Bacteroidetes	I	Alpha/beta hydrolase family	-	-	-	-	-	-	-	-	-	-	-	-	Abhydrolase_6,DLH
BYD3_k127_7269136_1	1122176.KB903550_gene4335	1.238e-149	486.0	COG0768@1|root,COG0768@2|Bacteria,4NE47@976|Bacteroidetes,1IQ2C@117747|Sphingobacteriia	976|Bacteroidetes	M	Penicillin-binding protein 2	mrdA	-	3.4.16.4	ko:K05515	ko00550,ko01501,map00550,map01501	-	-	-	ko00000,ko00001,ko01000,ko01011	-	-	-	PBP_dimer,Transpeptidase
BYD3_k127_7269136_4	760192.Halhy_3552	3.099e-48	177.0	COG0262@1|root,COG0262@2|Bacteria,4NQ2Y@976|Bacteroidetes,1ISG3@117747|Sphingobacteriia	976|Bacteroidetes	H	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis	folA	-	1.5.1.3	ko:K00287	ko00670,ko00790,ko01100,ko01523,map00670,map00790,map01100,map01523	M00126,M00840	R00936,R00937,R00939,R00940,R02235,R02236,R11765	RC00109,RC00110,RC00158	ko00000,ko00001,ko00002,ko01000	-	-	-	2TM,DHFR_1
BYD3_k127_7269136_2	760192.Halhy_3551	1.106e-111	374.0	28HQ3@1|root,2Z7XW@2|Bacteria,4NF9H@976|Bacteroidetes,1INN1@117747|Sphingobacteriia	976|Bacteroidetes	S	Protein of unknown function (DUF2851)	-	-	-	-	-	-	-	-	-	-	-	-	DUF2851
BYD3_k127_7269136_3	929562.Emtol_4258	2.425e-54	198.0	COG0811@1|root,COG0811@2|Bacteria,4NFIX@976|Bacteroidetes,47N0M@768503|Cytophagia	976|Bacteroidetes	U	PFAM MotA TolQ ExbB proton channel	exbB	-	-	ko:K03561	-	-	-	-	ko00000,ko02000	1.A.30.2.1	-	-	MotA_ExbB
BYD3_k127_7269136_6	929562.Emtol_4257	7.929e-33	131.0	COG0848@1|root,COG0848@2|Bacteria,4NNI6@976|Bacteroidetes,47PPW@768503|Cytophagia	976|Bacteroidetes	U	Biopolymer transport protein ExbD TolR	exbD	-	-	ko:K03559	-	-	-	-	ko00000,ko02000	1.A.30.2.1	-	-	ExbD
BYD3_k127_7269136_0	1408433.JHXV01000005_gene2534	6.154e-156	501.0	COG2866@1|root,COG2866@2|Bacteria,4NJB9@976|Bacteroidetes,1I0WK@117743|Flavobacteriia,2PBB0@246874|Cryomorphaceae	976|Bacteroidetes	E	Zn_pept	-	-	-	-	-	-	-	-	-	-	-	-	Peptidase_M14
BYD3_k127_7269136_7	468059.AUHA01000006_gene2938	1.825e-28	120.0	2DSJJ@1|root,33GER@2|Bacteria,4NZAF@976|Bacteroidetes,1IZF5@117747|Sphingobacteriia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_7269136_5	1122176.KB903587_gene4530	1.148e-42	183.0	COG1404@1|root,COG2911@1|root,COG3291@1|root,COG4935@1|root,COG1404@2|Bacteria,COG2911@2|Bacteria,COG3291@2|Bacteria,COG4935@2|Bacteria	2|Bacteria	O	Belongs to the peptidase S8 family	-	-	-	-	-	-	-	-	-	-	-	-	CHU_C,PKD,SprB
BYD3_k127_7271091_0	762903.Pedsa_0045	1.142e-79	289.0	COG1361@1|root,COG1470@1|root,COG1361@2|Bacteria,COG1470@2|Bacteria	2|Bacteria	S	cell adhesion involved in biofilm formation	-	-	-	-	-	-	-	-	-	-	-	-	CARDB,CHU_C,Calx-beta,CarboxypepD_reg,DUF11,Flg_new,HYR,PKD,SLH,SdrD_B,fn3
BYD3_k127_7271091_3	945713.IALB_2703	6.138e-15	89.0	COG3303@1|root,COG4412@1|root,COG3303@2|Bacteria,COG4412@2|Bacteria	2|Bacteria	S	peptidase activity, acting on L-amino acid peptides	-	-	1.7.2.2	ko:K03385	ko00910,ko01120,ko05132,map00910,map01120,map05132	M00530	R05712	RC00176	ko00000,ko00001,ko00002,ko01000	-	-	-	Cytochrom_C552,Cytochrome_C554,DUF4859,Paired_CXXCH_1
BYD3_k127_7271091_1	1123248.KB893333_gene2811	5.251e-56	203.0	COG2128@1|root,COG2128@2|Bacteria,4NNHK@976|Bacteroidetes	976|Bacteroidetes	S	Carboxymuconolactone decarboxylase family	-	-	-	-	-	-	-	-	-	-	-	-	CMD
BYD3_k127_7271091_2	1123248.KB893333_gene2813	3.399e-39	149.0	COG2128@1|root,COG2128@2|Bacteria,4NNYF@976|Bacteroidetes,1IT75@117747|Sphingobacteriia	976|Bacteroidetes	S	Carboxymuconolactone decarboxylase family	-	-	-	-	-	-	-	-	-	-	-	-	CMD
BYD3_k127_7289237_2	1313421.JHBV01000029_gene1950	1.262e-12	81.0	COG1404@1|root,COG3291@1|root,COG1404@2|Bacteria,COG3291@2|Bacteria	2|Bacteria	S	metallopeptidase activity	-	-	-	-	-	-	-	-	-	-	-	-	CHU_C,PKD,SprB
BYD3_k127_7289237_1	504472.Slin_1502	3.204e-51	187.0	COG0346@1|root,COG0346@2|Bacteria,4NQCJ@976|Bacteroidetes,47QR5@768503|Cytophagia	976|Bacteroidetes	E	PFAM Glyoxalase bleomycin resistance protein dioxygenase	-	-	-	-	-	-	-	-	-	-	-	-	Glyoxalase
BYD3_k127_7289237_0	1123248.KB893386_gene1918	3.657e-162	519.0	COG2271@1|root,COG2271@2|Bacteria,4NG3R@976|Bacteroidetes,1IW8Q@117747|Sphingobacteriia	976|Bacteroidetes	G	MFS_1 like family	-	-	-	-	-	-	-	-	-	-	-	-	MFS_1,MFS_1_like
BYD3_k127_7289730_1	1122176.KB903543_gene520	1.387e-157	508.0	COG1132@1|root,COG1132@2|Bacteria,4NEAG@976|Bacteroidetes,1IQFU@117747|Sphingobacteriia	976|Bacteroidetes	V	ABC transporter	-	-	-	ko:K18890	ko02010,map02010	M00707	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.106.13,3.A.1.106.5	-	-	ABC_membrane,ABC_tran
BYD3_k127_7289730_3	929562.Emtol_2898	1.515e-69	242.0	COG2003@1|root,COG2003@2|Bacteria,4NFBF@976|Bacteroidetes,47KTY@768503|Cytophagia	976|Bacteroidetes	E	Belongs to the UPF0758 family	radC	-	-	ko:K03630	-	-	-	-	ko00000	-	-	-	RadC
BYD3_k127_7289730_4	326297.Sama_2263	9.947e-09	58.0	COG0399@1|root,COG0399@2|Bacteria,1N0QW@1224|Proteobacteria,1S8YK@1236|Gammaproteobacteria,2QBWZ@267890|Shewanellaceae	1236|Gammaproteobacteria	J	PFAM S23 ribosomal protein	-	-	-	-	-	-	-	-	-	-	-	-	23S_rRNA_IVP
BYD3_k127_7289730_0	760192.Halhy_4317	5.122e-165	527.0	COG0626@1|root,COG0626@2|Bacteria,4NF0Q@976|Bacteroidetes,1INVN@117747|Sphingobacteriia	976|Bacteroidetes	E	PFAM Cys Met metabolism	metC	-	2.5.1.48,4.4.1.1,4.4.1.8	ko:K01739,ko:K01758,ko:K01760	ko00260,ko00270,ko00450,ko00920,ko01100,ko01110,ko01130,ko01230,map00260,map00270,map00450,map00920,map01100,map01110,map01130,map01230	M00017,M00338	R00782,R00999,R01001,R01286,R01288,R02408,R02508,R03217,R03260,R04770,R04930,R04941,R04944,R04945,R04946,R09366	RC00020,RC00056,RC00069,RC00348,RC00382,RC00420,RC00488,RC00710,RC01209,RC01210,RC01245,RC02303,RC02848,RC02866	ko00000,ko00001,ko00002,ko01000,ko04147	-	-	-	Cys_Met_Meta_PP
BYD3_k127_7289730_5	1121896.JMLU01000004_gene2656	1.02e-05	49.0	COG3292@1|root,COG3292@2|Bacteria,4NI2T@976|Bacteroidetes,1HZ22@117743|Flavobacteriia,2P01B@237|Flavobacterium	976|Bacteroidetes	T	Two component regulator propeller	-	-	-	-	-	-	-	-	-	-	-	-	Reg_prop
BYD3_k127_7289730_2	1237149.C900_05572	1.659e-96	326.0	COG2114@1|root,COG2114@2|Bacteria,4NG5A@976|Bacteroidetes,47QPA@768503|Cytophagia	976|Bacteroidetes	T	Adenylate and Guanylate cyclase catalytic domain	-	-	4.6.1.1	ko:K01768	ko00230,ko02025,ko04113,ko04213,map00230,map02025,map04113,map04213	M00695	R00089,R00434	RC00295	ko00000,ko00001,ko00002,ko01000	-	-	-	Guanylate_cyc
BYD3_k127_729338_5	1158294.JOMI01000003_gene2342	1.001e-46	177.0	COG0702@1|root,COG0702@2|Bacteria,4NG89@976|Bacteroidetes,2FTHD@200643|Bacteroidia	976|Bacteroidetes	GM	NAD(P)H-binding	-	-	-	-	-	-	-	-	-	-	-	-	Epimerase,NAD_binding_10
BYD3_k127_729338_3	1122176.KB903538_gene1475	2.959e-92	312.0	2BG4X@1|root,33858@2|Bacteria,4NW0E@976|Bacteroidetes,1IUAK@117747|Sphingobacteriia	976|Bacteroidetes	S	Domain of unknown function (DUF4249)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4249
BYD3_k127_729338_0	1122176.KB903531_gene2890	5.44e-309	966.0	COG1629@1|root,COG4771@2|Bacteria,4NF4B@976|Bacteroidetes,1IW7P@117747|Sphingobacteriia	976|Bacteroidetes	P	TonB dependent receptor	-	-	-	-	-	-	-	-	-	-	-	-	CarbopepD_reg_2,Plug,TonB_dep_Rec
BYD3_k127_729338_8	1313421.JHBV01000035_gene2547	1.173e-32	137.0	COG3735@1|root,COG3735@2|Bacteria,4NN4U@976|Bacteroidetes	976|Bacteroidetes	S	GumN protein	-	-	-	ko:K09973	-	-	-	-	ko00000	-	-	-	TraB
BYD3_k127_729338_4	1313421.JHBV01000015_gene5799	7.99e-66	228.0	COG1522@1|root,COG1522@2|Bacteria,4NMYA@976|Bacteroidetes,1IS24@117747|Sphingobacteriia	976|Bacteroidetes	K	Transcriptional regulator, asnc family	-	-	-	ko:K03719,ko:K05800	-	-	-	-	ko00000,ko03000,ko03036	-	-	-	AsnC_trans_reg,HTH_24
BYD3_k127_729338_1	1313421.JHBV01000035_gene2524	2.988e-213	671.0	COG0334@1|root,COG0334@2|Bacteria,4NEBH@976|Bacteroidetes,1IPRA@117747|Sphingobacteriia	976|Bacteroidetes	E	Belongs to the Glu Leu Phe Val dehydrogenases family	gdhA	-	1.4.1.3	ko:K00261	ko00220,ko00250,ko00471,ko00910,ko01100,ko01200,ko04217,ko04964,map00220,map00250,map00471,map00910,map01100,map01200,map04217,map04964	M00740	R00243,R00248	RC00006,RC02799	ko00000,ko00001,ko00002,ko01000,ko04147	-	-	-	ELFV_dehydrog,ELFV_dehydrog_N
BYD3_k127_729338_2	760192.Halhy_6299	6.049e-111	370.0	COG0755@1|root,COG0755@2|Bacteria,4NFUS@976|Bacteroidetes,1INSK@117747|Sphingobacteriia	976|Bacteroidetes	O	PFAM Cytochrome c assembly protein	ccmC	-	-	ko:K02195	ko02010,map02010	M00259	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.107	-	-	Cytochrom_C_asm
BYD3_k127_729338_6	1122176.KB903554_gene3867	5.001e-39	153.0	COG2386@1|root,COG2386@2|Bacteria,4NFQV@976|Bacteroidetes,1IP2M@117747|Sphingobacteriia	976|Bacteroidetes	O	PFAM Cytochrome c-type biogenesis protein CcmB	ccmB	-	-	ko:K02194	ko02010,map02010	M00259	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.107	-	-	CcmB
BYD3_k127_729338_9	760192.Halhy_6297	3.161e-07	54.0	COG0860@1|root,COG0860@2|Bacteria,4NHZA@976|Bacteroidetes	976|Bacteroidetes	M	N-acetylmuramoyl-L-alanine amidase	-	-	3.5.1.28	ko:K01448	ko01503,map01503	M00727	R04112	RC00064,RC00141	ko00000,ko00001,ko00002,ko01000,ko01011,ko03036	-	-	-	Amidase_3
BYD3_k127_7296705_0	760192.Halhy_2070	3.24e-104	355.0	COG0457@1|root,COG0823@1|root,COG2885@1|root,COG0457@2|Bacteria,COG0823@2|Bacteria,COG2885@2|Bacteria,4NE6G@976|Bacteroidetes,1IPCG@117747|Sphingobacteriia	976|Bacteroidetes	MU	Belongs to the ompA family	-	-	-	-	-	-	-	-	-	-	-	-	OmpA,PD40,TPR_16,TPR_2,TPR_8
BYD3_k127_7296705_1	1408433.JHXV01000005_gene2257	2.387e-05	48.0	COG2931@1|root,COG2931@2|Bacteria,4P2B3@976|Bacteroidetes,1I8WB@117743|Flavobacteriia,2PBTD@246874|Cryomorphaceae	976|Bacteroidetes	Q	calcium- and calmodulin-responsive adenylate cyclase activity	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_7318948_0	926549.KI421517_gene871	6.526e-150	492.0	COG5009@1|root,COG5009@2|Bacteria,4NECJ@976|Bacteroidetes,47MZQ@768503|Cytophagia	976|Bacteroidetes	M	Transglycosylase	-	-	2.4.1.129,3.4.16.4	ko:K05366	ko00550,ko01100,ko01501,map00550,map01100,map01501	-	-	-	ko00000,ko00001,ko01000,ko01003,ko01011	-	GT51	-	Transgly,Transpeptidase
BYD3_k127_7318948_2	760192.Halhy_1233	1.863e-120	397.0	COG0265@1|root,COG0265@2|Bacteria,4NFCS@976|Bacteroidetes,1INQ7@117747|Sphingobacteriia	976|Bacteroidetes	O	COGs COG0265 Trypsin-like serine protease typically periplasmic contain C-terminal PDZ domain	-	-	-	-	-	-	-	-	-	-	-	-	PDZ_2,Trypsin_2
BYD3_k127_7318948_1	1279009.ADICEAN_01064	9.095e-150	488.0	COG4784@1|root,COG4784@2|Bacteria,4PM59@976|Bacteroidetes,47MK2@768503|Cytophagia	976|Bacteroidetes	S	Peptidase family M48	-	-	-	-	-	-	-	-	-	-	-	-	Peptidase_M48
BYD3_k127_7318948_3	760192.Halhy_2522	5.269e-17	81.0	COG0828@1|root,COG0828@2|Bacteria,4NUPV@976|Bacteroidetes,1IU0K@117747|Sphingobacteriia	976|Bacteroidetes	J	Belongs to the bacterial ribosomal protein bS21 family	rpsU	-	-	ko:K02970	ko03010,map03010	M00178	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_S21
BYD3_k127_7326908_2	1122176.KB903531_gene3067	1.159e-45	168.0	COG2885@1|root,COG2885@2|Bacteria,4P5WM@976|Bacteroidetes	976|Bacteroidetes	M	Pkd domain containing protein	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_7326908_3	1122176.KB903531_gene2841	5.211e-07	57.0	298XI@1|root,2ZW1D@2|Bacteria	2|Bacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_7326908_0	760192.Halhy_0743	0.0	1173.0	COG0495@1|root,COG0495@2|Bacteria,4NE5K@976|Bacteroidetes,1IP89@117747|Sphingobacteriia	976|Bacteroidetes	J	Belongs to the class-I aminoacyl-tRNA synthetase family	leuS	GO:0003674,GO:0003824,GO:0004812,GO:0004823,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006429,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576	6.1.1.4	ko:K01869	ko00970,map00970	M00359,M00360	R03657	RC00055,RC00523	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029	-	-	-	Anticodon_1,DUF559,tRNA-synt_1,tRNA-synt_1_2
BYD3_k127_7326908_1	760192.Halhy_6210	5.197e-50	182.0	COG0457@1|root,COG2885@1|root,COG0457@2|Bacteria,COG2885@2|Bacteria,4NE6G@976|Bacteroidetes,1IPAI@117747|Sphingobacteriia	976|Bacteroidetes	M	Belongs to the ompA family	-	-	-	-	-	-	-	-	-	-	-	-	OmpA,PD40
BYD3_k127_7367863_0	1122176.KB903557_gene4043	1.028e-245	801.0	COG4412@1|root,COG4412@2|Bacteria,4PM4A@976|Bacteroidetes,1IWTI@117747|Sphingobacteriia	976|Bacteroidetes	UW	Fungalysin metallopeptidase (M36)	-	-	-	-	-	-	-	-	-	-	-	-	DUF11,FTP,PA,Peptidase_M36,Peptidase_M6
BYD3_k127_7367863_1	1408433.JHXV01000005_gene2257	2.995e-65	238.0	COG2931@1|root,COG2931@2|Bacteria,4P2B3@976|Bacteroidetes,1I8WB@117743|Flavobacteriia,2PBTD@246874|Cryomorphaceae	976|Bacteroidetes	Q	calcium- and calmodulin-responsive adenylate cyclase activity	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_7390792_3	313594.PI23P_06301	5.471e-07	52.0	COG0174@1|root,COG0174@2|Bacteria,4NGG2@976|Bacteroidetes,1HXPA@117743|Flavobacteriia,3VVAH@52959|Polaribacter	976|Bacteroidetes	E	Glutamine synthetase, beta-Grasp domain	glnII	-	6.3.1.2	ko:K01915	ko00220,ko00250,ko00630,ko00910,ko01100,ko01120,ko01230,ko02020,ko04217,ko04724,ko04727,map00220,map00250,map00630,map00910,map01100,map01120,map01230,map02020,map04217,map04724,map04727	-	R00253	RC00010,RC02798	ko00000,ko00001,ko01000,ko04147	-	-	-	Gln-synt_C,Gln-synt_N
BYD3_k127_7390792_1	485918.Cpin_1981	3.549e-126	421.0	COG0535@1|root,COG0535@2|Bacteria,4NEGK@976|Bacteroidetes,1IQVW@117747|Sphingobacteriia	976|Bacteroidetes	S	radical SAM domain protein	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_7390792_2	118173.KB235911_gene112	7.819e-76	260.0	COG4430@1|root,COG4430@2|Bacteria,1G2ES@1117|Cyanobacteria,1HBP2@1150|Oscillatoriales	1117|Cyanobacteria	S	Bacteriocin-protection, YdeI or OmpD-Associated	-	-	-	-	-	-	-	-	-	-	-	-	OmdA
BYD3_k127_7390792_0	1237149.C900_04255	4.988e-173	549.0	COG1748@1|root,COG1748@2|Bacteria,4NFM8@976|Bacteroidetes,47N5F@768503|Cytophagia	976|Bacteroidetes	E	Saccharopine dehydrogenase C-terminal domain	-	-	-	-	-	-	-	-	-	-	-	-	Sacchrp_dh_C,Sacchrp_dh_NADP
BYD3_k127_7434200_3	485918.Cpin_3672	1.401e-07	57.0	COG0142@1|root,COG0142@2|Bacteria,4NEGQ@976|Bacteroidetes,1INSC@117747|Sphingobacteriia	976|Bacteroidetes	H	Belongs to the FPP GGPP synthase family	idsA	-	2.5.1.1,2.5.1.10,2.5.1.29	ko:K13789	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	M00364,M00366	R01658,R02003,R02061	RC00279	ko00000,ko00001,ko00002,ko01000,ko01006	-	-	-	polyprenyl_synt
BYD3_k127_7434200_0	1229487.AMYW01000003_gene1974	9.867e-257	796.0	COG0491@1|root,COG0607@1|root,COG0491@2|Bacteria,COG0607@2|Bacteria,4NE2Y@976|Bacteroidetes,1HYF1@117743|Flavobacteriia,2NTC8@237|Flavobacterium	976|Bacteroidetes	P	beta-lactamase	-	-	-	-	-	-	-	-	-	-	-	-	Lactamase_B,Rhodanese
BYD3_k127_7434200_1	883096.HMPREF9699_00620	2.956e-98	323.0	COG2391@1|root,COG2391@2|Bacteria,4NM6E@976|Bacteroidetes,1I190@117743|Flavobacteriia	976|Bacteroidetes	S	YeeE YedE family	-	-	-	ko:K07112	-	-	-	-	ko00000	-	-	-	Sulf_transp
BYD3_k127_7434200_2	938709.AUSH02000031_gene1339	1.654e-29	119.0	COG2391@1|root,COG2391@2|Bacteria,4NQ9C@976|Bacteroidetes	976|Bacteroidetes	S	Transporter	-	-	-	ko:K07112	-	-	-	-	ko00000	-	-	-	Sulf_transp
BYD3_k127_7464376_1	1144313.PMI10_03055	2.447e-57	211.0	COG1404@1|root,COG3485@1|root,COG1404@2|Bacteria,COG3485@2|Bacteria,4NFYS@976|Bacteroidetes,1I168@117743|Flavobacteriia,2NV9F@237|Flavobacterium	976|Bacteroidetes	Q	Dioxygenase	-	-	-	-	-	-	-	-	-	-	-	-	Dioxygenase_C
BYD3_k127_7464376_0	1121481.AUAS01000001_gene4642	6.273e-93	309.0	COG0288@1|root,COG0288@2|Bacteria,4NEJT@976|Bacteroidetes,47PCQ@768503|Cytophagia	976|Bacteroidetes	P	Reversible hydration of carbon dioxide	cynT	-	4.2.1.1	ko:K01673	ko00910,map00910	-	R00132,R10092	RC02807	ko00000,ko00001,ko01000	-	-	-	Pro_CA
BYD3_k127_7464376_2	697282.Mettu_1888	1.701e-54	198.0	COG0589@1|root,COG0659@1|root,COG0589@2|Bacteria,COG0659@2|Bacteria,1MVWV@1224|Proteobacteria,1RMCN@1236|Gammaproteobacteria	1224|Proteobacteria	P	COG0659 Sulfate permease and related transporters (MFS superfamily)	-	-	4.2.1.1	ko:K01673,ko:K03321	ko00910,map00910	-	R00132,R10092	RC02807	ko00000,ko00001,ko01000,ko02000	2.A.53.3	-	-	Pro_CA,STAS,STAS_2,Sulfate_transp
BYD3_k127_7484458_11	1120965.AUBV01000003_gene578	1.118e-15	76.0	COG0099@1|root,COG0099@2|Bacteria,4NNGZ@976|Bacteroidetes,47PRH@768503|Cytophagia	976|Bacteroidetes	J	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits	rpsM	GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022613,GO:0032991,GO:0034641,GO:0034645,GO:0042254,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:0071840,GO:1901564,GO:1901566,GO:1901576,GO:1990904	-	ko:K02952	ko03010,map03010	M00178,M00179	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_S13
BYD3_k127_7484458_12	761193.Runsl_1678	2.418e-14	72.0	COG0257@1|root,COG0257@2|Bacteria,4NXGE@976|Bacteroidetes,47SMT@768503|Cytophagia	976|Bacteroidetes	J	Belongs to the bacterial ribosomal protein bL36 family	rpmJ	-	-	ko:K02919	ko03010,map03010	M00178	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_L36
BYD3_k127_7484458_9	1237149.C900_01058	3.905e-36	137.0	COG0361@1|root,COG0361@2|Bacteria,4NS6S@976|Bacteroidetes,47RFD@768503|Cytophagia	976|Bacteroidetes	J	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex	infA	GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0043021,GO:0043022,GO:0044424,GO:0044444,GO:0044464,GO:0044877	-	ko:K02518	-	-	-	-	ko00000,ko03012	-	-	-	eIF-1a
BYD3_k127_7484458_1	1237149.C900_01057	6.405e-121	392.0	COG0024@1|root,COG0024@2|Bacteria,4NERQ@976|Bacteroidetes,47KDT@768503|Cytophagia	976|Bacteroidetes	E	TIGRFAM methionine aminopeptidase, type I	map	-	3.4.11.18	ko:K01265	-	-	-	-	ko00000,ko01000,ko01002	-	-	-	Peptidase_M24
BYD3_k127_7484458_0	1237149.C900_01056	1.64e-205	647.0	COG0201@1|root,COG0201@2|Bacteria,4NEPU@976|Bacteroidetes,47JRD@768503|Cytophagia	976|Bacteroidetes	U	The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently	secY	-	-	ko:K03076	ko02024,ko03060,ko03070,map02024,map03060,map03070	M00335	-	-	ko00000,ko00001,ko00002,ko02044	3.A.5	-	-	SecY
BYD3_k127_7484458_5	1121859.KB890757_gene1692	6.101e-55	196.0	COG0200@1|root,COG0200@2|Bacteria,4NNFQ@976|Bacteroidetes,47PP0@768503|Cytophagia	976|Bacteroidetes	J	Binds to the 23S rRNA	rplO	GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904	-	ko:K02876	ko03010,map03010	M00178,M00179	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_L27A
BYD3_k127_7484458_10	1237149.C900_01054	1.839e-17	83.0	COG1841@1|root,COG1841@2|Bacteria,4NUXV@976|Bacteroidetes,47S6M@768503|Cytophagia	976|Bacteroidetes	J	Ribosomal protein L30	rpmD	GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904	-	ko:K02907	ko03010,map03010	M00178,M00179	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_L30
BYD3_k127_7484458_2	1237149.C900_01053	5.813e-95	312.0	COG0098@1|root,COG0098@2|Bacteria,4NG1Z@976|Bacteroidetes,47M7G@768503|Cytophagia	976|Bacteroidetes	J	Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body	rpsE	GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904	-	ko:K02988	ko03010,map03010	M00178,M00179	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_S5,Ribosomal_S5_C
BYD3_k127_7484458_6	1120965.AUBV01000003_gene571	6.377e-40	151.0	COG0256@1|root,COG0256@2|Bacteria,4NQAS@976|Bacteroidetes,47RC9@768503|Cytophagia	976|Bacteroidetes	J	This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance	rplR	GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0008097,GO:0015934,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0097159,GO:1901363,GO:1990904	-	ko:K02881	ko03010,map03010	M00178,M00179	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_L18p
BYD3_k127_7484458_3	1237149.C900_01051	7.429e-77	261.0	COG0097@1|root,COG0097@2|Bacteria,4NGJM@976|Bacteroidetes,47PER@768503|Cytophagia	976|Bacteroidetes	J	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center	rplF	GO:0002181,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904	-	ko:K02933	ko03010,map03010	M00178,M00179	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_L6
BYD3_k127_7484458_4	1124780.ANNU01000035_gene229	2.171e-65	225.0	COG0096@1|root,COG0096@2|Bacteria,4NNFW@976|Bacteroidetes,47PPU@768503|Cytophagia	976|Bacteroidetes	J	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit	rpsH	GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015935,GO:0022626,GO:0022627,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904	-	ko:K02994	ko03010,map03010	M00178,M00179	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_S8
BYD3_k127_7484458_7	1237149.C900_01049	1.028e-39	148.0	COG0199@1|root,COG0199@2|Bacteria,4NQ6N@976|Bacteroidetes,47QB0@768503|Cytophagia	976|Bacteroidetes	J	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site	rpsN	GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904	-	ko:K02954	ko03010,map03010	M00178,M00179	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_S14
BYD3_k127_7484458_8	1237149.C900_01048	2.991e-36	137.0	COG0094@1|root,COG0094@2|Bacteria,4NEGY@976|Bacteroidetes,47KSN@768503|Cytophagia	976|Bacteroidetes	J	This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits	rplE	GO:0000027,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904	-	ko:K02931	ko03010,map03010	M00178,M00179	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_L5,Ribosomal_L5_C
BYD3_k127_7504743_3	391587.KAOT1_09896	1.318e-14	74.0	2C87P@1|root,32H7J@2|Bacteria,4NS7S@976|Bacteroidetes,1I3A8@117743|Flavobacteriia	976|Bacteroidetes	S	DoxX-like family	-	-	-	-	-	-	-	-	-	-	-	-	DoxX_2
BYD3_k127_7504743_1	485918.Cpin_6530	7.853e-93	308.0	COG0288@1|root,COG0288@2|Bacteria,4NEJT@976|Bacteroidetes,1IPRZ@117747|Sphingobacteriia	976|Bacteroidetes	P	Reversible hydration of carbon dioxide	yadF	-	4.2.1.1	ko:K01673	ko00910,map00910	-	R00132,R10092	RC02807	ko00000,ko00001,ko01000	-	-	-	Pro_CA
BYD3_k127_7504743_2	1034807.FBFL15_0915	1.001e-14	85.0	2A2GV@1|root,30QU7@2|Bacteria,4NYES@976|Bacteroidetes	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_7504743_0	1408433.JHXV01000028_gene2155	5.986e-214	676.0	COG1629@1|root,COG4771@2|Bacteria,4NFZY@976|Bacteroidetes,1HYJ3@117743|Flavobacteriia,2PAHE@246874|Cryomorphaceae	976|Bacteroidetes	P	TonB dependent receptor	-	-	-	ko:K16087	-	-	-	-	ko00000,ko02000	1.B.14.2	-	-	Plug,TonB_dep_Rec
BYD3_k127_7538679_0	1453500.AT05_10945	5.679e-219	688.0	COG0057@1|root,COG0057@2|Bacteria,4NG5C@976|Bacteroidetes,1HXX7@117743|Flavobacteriia	976|Bacteroidetes	G	Belongs to the glyceraldehyde-3-phosphate dehydrogenase family	gapA2	-	1.2.1.12	ko:K00134	ko00010,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04066,ko05010,map00010,map00710,map01100,map01110,map01120,map01130,map01200,map01230,map04066,map05010	M00001,M00002,M00003,M00165,M00166,M00308,M00552	R01061	RC00149	ko00000,ko00001,ko00002,ko01000,ko04131,ko04147	-	-	-	Gp_dh_C,Gp_dh_N
BYD3_k127_7538679_2	509635.N824_02290	4.697e-34	148.0	COG0457@1|root,COG0457@2|Bacteria,4PNC5@976|Bacteroidetes	976|Bacteroidetes	S	Tetratricopeptide repeat	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_7538679_1	755732.Fluta_3954	3.397e-143	459.0	COG0596@1|root,COG0596@2|Bacteria,4NM26@976|Bacteroidetes	976|Bacteroidetes	S	Hydrolase or acyltransferase (Alpha beta hydrolase superfamily)-like protein	-	-	-	-	-	-	-	-	-	-	-	-	Abhydrolase_1,Hydrolase_4
BYD3_k127_7553017_0	1313421.JHBV01000023_gene5125	4.791e-93	317.0	COG1858@1|root,COG1858@2|Bacteria,4NE4P@976|Bacteroidetes,1INRI@117747|Sphingobacteriia	976|Bacteroidetes	C	cytochrome C peroxidase	-	-	1.11.1.5	ko:K00428	-	-	-	-	ko00000,ko01000	-	-	-	CCP_MauG
BYD3_k127_7553017_1	929556.Solca_2905	2.278e-56	207.0	COG1629@1|root,COG4771@2|Bacteria,4NEIG@976|Bacteroidetes,1IP00@117747|Sphingobacteriia	976|Bacteroidetes	P	PFAM TonB-dependent Receptor Plug	-	-	-	-	-	-	-	-	-	-	-	-	CarbopepD_reg_2,CarboxypepD_reg,OMP_b-brl_3,Plug
BYD3_k127_7574874_1	1121887.AUDK01000004_gene334	2.359e-72	250.0	COG0668@1|root,COG0668@2|Bacteria,4NH7C@976|Bacteroidetes,1ICX5@117743|Flavobacteriia,2NVTM@237|Flavobacterium	976|Bacteroidetes	M	Mechanosensitive ion channel	-	-	-	ko:K22044	-	-	-	-	ko00000,ko02000	1.A.23.3	-	-	MS_channel
BYD3_k127_7574874_0	1227272.HMPREF1556_00475	2.668e-131	446.0	COG0209@1|root,COG0209@2|Bacteria	2|Bacteria	F	ribonucleoside-diphosphate reductase activity	rtpR	-	1.1.98.6,1.17.4.1	ko:K00525,ko:K21636	ko00230,ko00240,ko01100,map00230,map00240,map01100	M00053	R02017,R02018,R02019,R02024,R11633,R11634,R11635,R11636	RC00613	ko00000,ko00001,ko00002,ko01000,ko03400	-	-	-	ATP-cone,LAGLIDADG_3,Ribonuc_red_lgC
BYD3_k127_7583483_4	760192.Halhy_1155	9.965e-84	288.0	COG0771@1|root,COG0771@2|Bacteria,4NEFF@976|Bacteroidetes,1INPJ@117747|Sphingobacteriia	976|Bacteroidetes	M	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)	murD	-	6.3.2.9	ko:K01925	ko00471,ko00550,ko01100,map00471,map00550,map01100	-	R02783	RC00064,RC00141	ko00000,ko00001,ko01000,ko01011	-	-	-	Mur_ligase_C,Mur_ligase_M
BYD3_k127_7583483_5	1227739.Hsw_1171	7.924e-65	223.0	COG0472@1|root,COG0472@2|Bacteria,4NE0T@976|Bacteroidetes,47KEP@768503|Cytophagia	976|Bacteroidetes	M	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan	mraY	-	2.7.8.13	ko:K01000	ko00550,ko01100,ko01502,map00550,map01100,map01502	-	R05629,R05630	RC00002,RC02753	ko00000,ko00001,ko01000,ko01011	9.B.146	-	-	Glycos_transf_4,MraY_sig1
BYD3_k127_7583483_2	984262.SGRA_0880	2.972e-102	340.0	COG0472@1|root,COG0472@2|Bacteria,4NE0T@976|Bacteroidetes,1IQU9@117747|Sphingobacteriia	976|Bacteroidetes	M	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan	mraY	-	2.7.8.13	ko:K01000	ko00550,ko01100,ko01502,map00550,map01100,map01502	-	R05629,R05630	RC00002,RC02753	ko00000,ko00001,ko01000,ko01011	9.B.146	-	-	Glycos_transf_4,MraY_sig1
BYD3_k127_7583483_0	760192.Halhy_1157	1.858e-169	544.0	COG0769@1|root,COG0769@2|Bacteria,4NE9W@976|Bacteroidetes,1INW4@117747|Sphingobacteriia	976|Bacteroidetes	M	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan	murE	-	6.3.2.13	ko:K01928	ko00300,ko00550,map00300,map00550	-	R02788	RC00064,RC00090	ko00000,ko00001,ko01000,ko01011	-	-	-	Mur_ligase,Mur_ligase_C,Mur_ligase_M
BYD3_k127_7583483_1	1122176.KB903576_gene4955	5.214e-166	546.0	COG0768@1|root,COG0768@2|Bacteria,4NERV@976|Bacteroidetes,1IQ79@117747|Sphingobacteriia	976|Bacteroidetes	M	Cell division protein FtsI penicillin-binding protein 2	ftsI	-	3.4.16.4	ko:K03587	ko00550,ko01501,map00550,map01501	-	-	-	ko00000,ko00001,ko01000,ko01011,ko03036	-	-	-	PASTA,PBP_dimer,Transpeptidase
BYD3_k127_7583483_7	1122179.KB890420_gene2401	1.284e-12	71.0	2ADW1@1|root,313N1@2|Bacteria,4P9FS@976|Bacteroidetes,1ITVW@117747|Sphingobacteriia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_7583483_3	1410666.JHXG01000001_gene793	1.116e-99	334.0	COG0275@1|root,COG0275@2|Bacteria,4NFQB@976|Bacteroidetes,2FMPT@200643|Bacteroidia	976|Bacteroidetes	J	Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA	rsmH	GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016434,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0070475,GO:0071424,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360	2.1.1.199	ko:K03438	-	-	-	-	ko00000,ko01000,ko03009	-	-	-	Methyltransf_5
BYD3_k127_7583483_6	760192.Halhy_1161	1.115e-45	170.0	COG2001@1|root,COG2001@2|Bacteria,4NM4X@976|Bacteroidetes,1IY8G@117747|Sphingobacteriia	976|Bacteroidetes	K	MraZ protein, putative antitoxin-like	mraZ	GO:0000976,GO:0001067,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0006355,GO:0008150,GO:0009889,GO:0009890,GO:0009892,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0019219,GO:0019222,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031333,GO:0043254,GO:0043565,GO:0044087,GO:0044212,GO:0045892,GO:0045934,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051128,GO:0051129,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:0140110,GO:1901363,GO:1902679,GO:1903506,GO:1903507,GO:1990837,GO:2000112,GO:2000113,GO:2000142,GO:2000143,GO:2001141	-	ko:K03925	-	-	-	-	ko00000	-	-	-	MraZ
BYD3_k127_7583483_8	1300143.CCAV010000002_gene436	0.0007324	51.0	COG3292@1|root,COG3292@2|Bacteria,4PHXH@976|Bacteroidetes,1I73G@117743|Flavobacteriia	976|Bacteroidetes	T	regulator of chromosome condensation, RCC1	-	-	-	-	-	-	-	-	-	-	-	-	Reg_prop
BYD3_k127_75860_3	929556.Solca_1596	3.138e-05	56.0	COG1044@1|root,COG1044@2|Bacteria,4NT1W@976|Bacteroidetes,1IU2F@117747|Sphingobacteriia	976|Bacteroidetes	M	Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_75860_0	929713.NIASO_00625	3.273e-124	413.0	COG1538@1|root,COG1538@2|Bacteria,4NEMI@976|Bacteroidetes,1INTW@117747|Sphingobacteriia	976|Bacteroidetes	MU	PFAM Outer membrane efflux protein	-	-	-	-	-	-	-	-	-	-	-	-	OEP
BYD3_k127_75860_1	1185876.BN8_03110	4.762e-86	289.0	COG0841@1|root,COG0841@2|Bacteria,4NDZG@976|Bacteroidetes,47K8C@768503|Cytophagia	976|Bacteroidetes	V	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family	bepE_4	-	-	ko:K03296,ko:K18138	ko01501,ko01503,map01501,map01503	M00647,M00699,M00718	-	-	ko00000,ko00001,ko00002,ko01504,ko02000	2.A.6.2	-	-	ACR_tran
BYD3_k127_7596794_4	1122176.KB903565_gene3283	3.637e-47	170.0	COG0735@1|root,COG0735@2|Bacteria,4NM8S@976|Bacteroidetes,1IRT0@117747|Sphingobacteriia	976|Bacteroidetes	P	Belongs to the Fur family	fur	-	-	ko:K03711	-	-	-	-	ko00000,ko03000	-	-	-	FUR
BYD3_k127_7596794_0	760192.Halhy_2808	5.677e-175	558.0	COG0104@1|root,COG0104@2|Bacteria,4NGRZ@976|Bacteroidetes,1IQYP@117747|Sphingobacteriia	976|Bacteroidetes	F	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP	purA	GO:0003674,GO:0003824,GO:0004019,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006163,GO:0006164,GO:0006167,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044208,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046033,GO:0046040,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576	6.3.4.4	ko:K01939	ko00230,ko00250,ko01100,map00230,map00250,map01100	M00049	R01135	RC00458,RC00459	ko00000,ko00001,ko00002,ko01000	-	-	-	Adenylsucc_synt
BYD3_k127_7596794_5	760192.Halhy_3448	9.272e-47	177.0	COG0500@1|root,COG0500@2|Bacteria,4NPKT@976|Bacteroidetes	976|Bacteroidetes	Q	Protein of unknown function (DUF1698)	-	-	-	-	-	-	-	-	-	-	-	-	Methyltransf_11,Methyltransf_31
BYD3_k127_7596794_2	1122179.KB890421_gene2515	1.066e-95	323.0	COG3608@1|root,COG3608@2|Bacteria,4NE8S@976|Bacteroidetes,1IW7K@117747|Sphingobacteriia	976|Bacteroidetes	S	Succinylglutamate desuccinylase / Aspartoacylase family	-	-	-	ko:K06987	-	-	-	-	ko00000	-	-	-	AstE_AspA
BYD3_k127_7596794_3	301.JNHE01000006_gene1198	3.899e-91	308.0	COG0189@1|root,COG0189@2|Bacteria,1MX62@1224|Proteobacteria,1RM8B@1236|Gammaproteobacteria,1YD38@136841|Pseudomonas aeruginosa group	1236|Gammaproteobacteria	F	Belongs to the RimK family	rimK	GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006464,GO:0006807,GO:0006950,GO:0006974,GO:0007154,GO:0008150,GO:0008152,GO:0009432,GO:0009605,GO:0009987,GO:0009991,GO:0016874,GO:0016879,GO:0016881,GO:0018169,GO:0018410,GO:0019538,GO:0031668,GO:0033554,GO:0036211,GO:0042802,GO:0043170,GO:0043412,GO:0043687,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044464,GO:0050896,GO:0051716,GO:0070739,GO:0071496,GO:0071704,GO:0140096,GO:1901564	-	ko:K05844	-	-	-	-	ko00000,ko01000,ko03009	-	-	-	RimK
BYD3_k127_7596794_1	1122176.KB903554_gene3852	1.252e-149	484.0	COG2270@1|root,COG2270@2|Bacteria,4NEKI@976|Bacteroidetes,1INX9@117747|Sphingobacteriia	976|Bacteroidetes	S	COGs COG2270 Permease of the major facilitator superfamily	-	-	-	ko:K06902	ko04138,map04138	-	-	-	ko00000,ko00001,ko02000,ko04131	2.A.1.24,9.A.15.1	-	-	ATG22
BYD3_k127_7644492_0	867900.Celly_2987	0.0	1240.0	COG1629@1|root,COG4771@2|Bacteria,4NFJJ@976|Bacteroidetes,1HXEC@117743|Flavobacteriia,1F9VX@104264|Cellulophaga	976|Bacteroidetes	P	TonB dependent receptor	-	-	-	ko:K02014	-	-	-	-	ko00000,ko02000	1.B.14	-	-	CarbopepD_reg_2,Plug,TonB_dep_Rec
BYD3_k127_7644492_1	485917.Phep_1216	2.2e-84	284.0	COG0431@1|root,COG0431@2|Bacteria,4NN31@976|Bacteroidetes,1ISI3@117747|Sphingobacteriia	976|Bacteroidetes	S	PFAM NADPH-dependent FMN reductase	-	-	-	-	-	-	-	-	-	-	-	-	FMN_red
BYD3_k127_7644492_2	1121373.KB903621_gene1842	6.394e-21	100.0	COG3652@1|root,COG3652@2|Bacteria,4NQE9@976|Bacteroidetes,47QZE@768503|Cytophagia	976|Bacteroidetes	S	Domain of unknown function (DUF4142)	-	-	-	ko:K08995	-	-	-	-	ko00000	-	-	-	DUF4142
BYD3_k127_7644492_4	1122176.KB903543_gene510	0.0005947	51.0	COG3391@1|root,COG4447@1|root,COG3391@2|Bacteria,COG4447@2|Bacteria,4NRP7@976|Bacteroidetes,1IU78@117747|Sphingobacteriia	976|Bacteroidetes	UW	protein related to plant photosystem II stability assembly factor	-	-	-	-	-	-	-	-	-	-	-	-	PSII_BNR
BYD3_k127_7644492_3	290402.Cbei_2916	0.0005363	51.0	COG3391@1|root,COG3391@2|Bacteria,1W2RU@1239|Firmicutes,24F0Z@186801|Clostridia,36GKF@31979|Clostridiaceae	186801|Clostridia	S	amine dehydrogenase activity	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_7668796_3	1123057.P872_06580	1.616e-15	78.0	COG2141@1|root,COG2141@2|Bacteria,4NPX8@976|Bacteroidetes,47QFN@768503|Cytophagia	976|Bacteroidetes	C	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_7668796_0	1166018.FAES_5122	7.653e-190	629.0	COG3292@1|root,COG4585@1|root,COG3292@2|Bacteria,COG4585@2|Bacteria,4NK8Q@976|Bacteroidetes,47XFV@768503|Cytophagia	976|Bacteroidetes	T	Histidine kinase	-	-	-	-	-	-	-	-	-	-	-	-	HATPase_c,HTH_18,HisKA_3,Reg_prop,Y_Y_Y
BYD3_k127_7668796_1	1166018.FAES_5123	4.012e-82	278.0	COG2197@1|root,COG2197@2|Bacteria,4NHTM@976|Bacteroidetes,47PWE@768503|Cytophagia	976|Bacteroidetes	KT	Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain	-	-	-	-	-	-	-	-	-	-	-	-	GerE,Response_reg
BYD3_k127_7668796_2	1453500.AT05_04955	1.015e-26	120.0	COG2931@1|root,COG2931@2|Bacteria	2|Bacteria	Q	calcium- and calmodulin-responsive adenylate cyclase activity	fitD	-	-	ko:K19615	ko02020,map02020	-	-	-	ko00000,ko00001,ko02042	-	-	-	DUF1080,PPC,TcdA_TcdB_pore
BYD3_k127_7691703_2	1122176.KB903550_gene4300	1.424e-79	272.0	COG4191@1|root,COG4191@2|Bacteria,4NEMP@976|Bacteroidetes,1J0MH@117747|Sphingobacteriia	976|Bacteroidetes	T	His Kinase A (phosphoacceptor) domain	vicK	-	-	-	-	-	-	-	-	-	-	-	HATPase_c
BYD3_k127_7691703_3	1185876.BN8_03106	7.633e-31	124.0	2DPSP@1|root,33387@2|Bacteria,4NVSW@976|Bacteroidetes,47T2S@768503|Cytophagia	976|Bacteroidetes	J	23S rRNA-intervening sequence protein	-	-	-	-	-	-	-	-	-	-	-	-	23S_rRNA_IVP
BYD3_k127_7691703_0	1313421.JHBV01000005_gene4540	8.321e-231	725.0	COG1866@1|root,COG1866@2|Bacteria,4NEGI@976|Bacteroidetes,1INP6@117747|Sphingobacteriia	976|Bacteroidetes	C	Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA	pckA	-	4.1.1.49	ko:K01610	ko00010,ko00020,ko00620,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00020,map00620,map00710,map01100,map01110,map01120,map01130,map01200	M00003,M00170	R00341	RC00002,RC02741	ko00000,ko00001,ko00002,ko01000	-	-	-	PEPCK_ATP
BYD3_k127_7691703_1	1122599.AUGR01000019_gene3071	2.058e-133	437.0	COG1404@1|root,COG4935@1|root,COG1404@2|Bacteria,COG4935@2|Bacteria	2|Bacteria	O	Belongs to the peptidase S8 family	prcA	-	3.4.21.121	ko:K20755	-	-	-	-	ko00000,ko01000,ko01002	-	-	-	FTP,P_proprotein,PepSY,Peptidase_M4,Peptidase_M4_C,Peptidase_S8
BYD3_k127_7708654_0	1469557.JSWF01000024_gene1778	4.175e-184	587.0	COG1228@1|root,COG4538@1|root,COG1228@2|Bacteria,COG4538@2|Bacteria,4NGGD@976|Bacteroidetes,1I07B@117743|Flavobacteriia	976|Bacteroidetes	Q	amidohydrolase	-	-	-	-	-	-	-	-	-	-	-	-	Amidohydro_1,SnoaL_2
BYD3_k127_7708654_1	1120951.AUBG01000015_gene3410	1.291e-62	220.0	2AEGW@1|root,314C3@2|Bacteria,4NQ3M@976|Bacteroidetes,1I3AU@117743|Flavobacteriia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_77138_1	760192.Halhy_4940	1.952e-109	380.0	COG0745@1|root,COG2207@1|root,COG3292@1|root,COG5002@1|root,COG0745@2|Bacteria,COG2207@2|Bacteria,COG3292@2|Bacteria,COG5002@2|Bacteria,4P0IA@976|Bacteroidetes	976|Bacteroidetes	T	histidine kinase-, DNA gyrase B	-	-	-	-	-	-	-	-	-	-	-	-	HATPase_c,HTH_18,HisKA,Reg_prop,Response_reg,Y_Y_Y
BYD3_k127_77138_0	1453500.AT05_07455	1.318e-184	586.0	COG0427@1|root,COG0427@2|Bacteria,4NFS3@976|Bacteroidetes,1HWJT@117743|Flavobacteriia	976|Bacteroidetes	C	acetyl-CoA hydrolase	-	-	-	-	-	-	-	-	-	-	-	-	AcetylCoA_hyd_C,AcetylCoA_hydro
BYD3_k127_77138_2	945713.IALB_2656	1.84e-08	59.0	COG3291@1|root,COG4409@1|root,COG3291@2|Bacteria,COG4409@2|Bacteria	2|Bacteria	G	exo-alpha-(2->6)-sialidase activity	wcoB	-	3.2.1.4	ko:K01179	ko00500,ko01100,map00500,map01100	-	R06200,R11307,R11308	-	ko00000,ko00001,ko01000	-	GH5,GH9	-	Beta_helix,IgGFc_binding,PKD
BYD3_k127_7731980_1	762903.Pedsa_2900	7.231e-57	211.0	COG2972@1|root,COG2972@2|Bacteria,4NH1Q@976|Bacteroidetes,1IQI1@117747|Sphingobacteriia	976|Bacteroidetes	T	PFAM Signal transduction histidine kinase, internal region	-	-	-	-	-	-	-	-	-	-	-	-	His_kinase
BYD3_k127_7731980_0	1317122.ATO12_02635	2.521e-62	220.0	COG3279@1|root,COG3279@2|Bacteria,4NF8U@976|Bacteroidetes,1I0SE@117743|Flavobacteriia,2YM52@290174|Aquimarina	976|Bacteroidetes	K	LytTr DNA-binding domain	-	-	-	-	-	-	-	-	-	-	-	-	LytTR,Response_reg
BYD3_k127_7731980_2	1168034.FH5T_10890	1.196e-32	130.0	COG0642@1|root,COG3292@1|root,COG2205@2|Bacteria,COG3292@2|Bacteria,4NDXU@976|Bacteroidetes	976|Bacteroidetes	T	Histidine kinase	-	-	-	-	-	-	-	-	-	-	-	-	HATPase_c,HTH_18,HisKA,Reg_prop,Response_reg,Y_Y_Y
BYD3_k127_7744458_0	1313301.AUGC01000009_gene1096	1.209e-157	505.0	COG2433@1|root,COG2433@2|Bacteria,4PKWF@976|Bacteroidetes	976|Bacteroidetes	S	Psort location OuterMembrane, score	-	-	-	-	-	-	-	-	-	-	-	-	Porin_O_P
BYD3_k127_7744458_3	99598.Cal7507_2833	1.81e-54	201.0	COG2154@1|root,COG2154@2|Bacteria	2|Bacteria	H	pterin-4-alpha-carbinolamine dehydratase	-	-	4.2.1.96	ko:K01724	ko00790,map00790	-	R04734	RC01208	ko00000,ko00001,ko01000,ko04147	-	-	-	Pterin_4a
BYD3_k127_7744458_5	1122605.KB893626_gene2796	7.349e-42	160.0	COG1714@1|root,COG1714@2|Bacteria	2|Bacteria	S	RDD family	-	-	-	-	-	-	-	-	-	-	-	-	RDD
BYD3_k127_7744458_4	1123057.P872_19760	1.273e-46	172.0	COG1633@1|root,COG1633@2|Bacteria,4NPEC@976|Bacteroidetes,47SGR@768503|Cytophagia	976|Bacteroidetes	S	Domain of unknown function (DUF2383)	-	-	-	-	-	-	-	-	-	-	-	-	DUF2383
BYD3_k127_7744458_2	1122176.KB903587_gene4515	6.074e-66	250.0	COG3209@1|root,COG3209@2|Bacteria,4PKBQ@976|Bacteroidetes	976|Bacteroidetes	M	SPTR CHU large protein	-	-	-	-	-	-	-	-	-	-	-	-	CHU_C,DUF5011,HYR,Laminin_G_3,SprB
BYD3_k127_7744458_8	1121896.JMLU01000002_gene526	0.0002835	49.0	COG3291@1|root,COG4935@1|root,COG3291@2|Bacteria,COG4935@2|Bacteria,4PPGH@976|Bacteroidetes,1IKM5@117743|Flavobacteriia,2NW1I@237|Flavobacterium	976|Bacteroidetes	O	oxidoreductase activity	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_7744458_6	251221.35214019	4.054e-16	91.0	COG3391@1|root,COG3391@2|Bacteria,1G0EB@1117|Cyanobacteria	1117|Cyanobacteria	DZ	PFAM Na-Ca exchanger integrin-beta4 peptidase-like FG-GAP	-	-	-	ko:K20276	ko02024,map02024	-	-	-	ko00000,ko00001	-	-	-	Calx-beta,DUF4347,He_PIG,HemolysinCabind,PPC,TIG,VCBS
BYD3_k127_7744458_1	1121285.AUFK01000009_gene1169	1.029e-116	383.0	COG1028@1|root,COG1028@2|Bacteria,4NFK6@976|Bacteroidetes,1HY5Q@117743|Flavobacteriia,3ZPPI@59732|Chryseobacterium	976|Bacteroidetes	IQ	Short-chain dehydrogenase	-	-	-	-	-	-	-	-	-	-	-	-	adh_short_C2
BYD3_k127_7744458_7	929713.NIASO_12100	5.1e-07	59.0	COG3637@1|root,COG3637@2|Bacteria,4NWNN@976|Bacteroidetes,1J0D5@117747|Sphingobacteriia	976|Bacteroidetes	M	Outer membrane protein beta-barrel domain	-	-	-	-	-	-	-	-	-	-	-	-	OMP_b-brl,OMP_b-brl_2
BYD3_k127_7744458_9	1120966.AUBU01000005_gene3782	0.0003959	49.0	COG3209@1|root,COG3291@1|root,COG3209@2|Bacteria,COG3291@2|Bacteria	2|Bacteria	S	metallopeptidase activity	-	-	-	-	-	-	-	-	-	-	-	-	CHU_C,IgGFc_binding,PKD,SprB
BYD3_k127_7755750_3	761193.Runsl_0735	3.799e-10	61.0	2E3V1@1|root,32YSA@2|Bacteria,4NV88@976|Bacteroidetes,47S3J@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_7755750_2	926560.KE387023_gene2820	1.697e-56	207.0	COG0115@1|root,COG0115@2|Bacteria	2|Bacteria	E	branched-chain-amino-acid transaminase activity	dat	-	2.6.1.21,2.6.1.42	ko:K00824,ko:K00826	ko00270,ko00280,ko00290,ko00310,ko00330,ko00360,ko00472,ko00473,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00270,map00280,map00290,map00310,map00330,map00360,map00472,map00473,map00770,map01100,map01110,map01130,map01210,map01230	M00019,M00036,M00119,M00570	R01090,R01148,R01214,R01582,R02199,R02459,R02851,R02924,R05053,R10991	RC00006,RC00008,RC00025,RC00036	ko00000,ko00001,ko00002,ko01000,ko01007	-	-	-	Aminotran_4
BYD3_k127_7755750_1	1453500.AT05_08585	4.018e-92	316.0	COG1523@1|root,COG1523@2|Bacteria,4NHA4@976|Bacteroidetes,1HYEX@117743|Flavobacteriia	976|Bacteroidetes	G	Belongs to the glycosyl hydrolase 13 family	-	-	-	-	-	-	-	-	-	-	-	-	Alpha-amylase,CBM_48
BYD3_k127_7755750_0	1122176.KB903541_gene244	1.04e-170	550.0	COG1523@1|root,COG1523@2|Bacteria,4NHA4@976|Bacteroidetes,1IQ6P@117747|Sphingobacteriia	976|Bacteroidetes	G	Belongs to the glycosyl hydrolase 13 family	-	-	-	-	-	-	-	-	-	-	-	-	Alpha-amylase,CBM_48
BYD3_k127_7755750_4	511051.CSE_15310	0.0001286	52.0	COG0438@1|root,COG0438@2|Bacteria	2|Bacteria	M	transferase activity, transferring glycosyl groups	-	-	-	-	-	-	-	-	-	-	-	-	Glyco_trans_1_4,Glyco_transf_4,Glycos_transf_1
BYD3_k127_7759085_3	1250005.PHEL85_2529	1.66e-66	230.0	COG0041@1|root,COG0041@2|Bacteria,4NME9@976|Bacteroidetes,1HYJ9@117743|Flavobacteriia,3VVR2@52959|Polaribacter	976|Bacteroidetes	F	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)	purE	-	5.4.99.18	ko:K01588	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	M00048	R07405	RC01947	ko00000,ko00001,ko00002,ko01000	-	-	-	AIRC
BYD3_k127_7759085_2	927658.AJUM01000034_gene203	2.474e-118	392.0	COG0026@1|root,COG0026@2|Bacteria,4NEGE@976|Bacteroidetes,2G0M8@200643|Bacteroidia	976|Bacteroidetes	F	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)	purK	-	6.3.4.18	ko:K01589	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	M00048	R07404	RC01927	ko00000,ko00001,ko00002,ko01000	-	-	-	ATP-grasp
BYD3_k127_7759085_0	929703.KE386491_gene2901	1.874e-169	546.0	COG0044@1|root,COG0044@2|Bacteria,4NE3T@976|Bacteroidetes,47JPG@768503|Cytophagia	976|Bacteroidetes	F	TIGRFAM dihydroorotase, multifunctional complex type	pyrC	-	3.5.2.3	ko:K01465	ko00240,ko01100,map00240,map01100	M00051	R01993	RC00632	ko00000,ko00001,ko00002,ko01000	-	-	-	Amidohydro_1
BYD3_k127_7759085_1	247639.MGP2080_08836	5.977e-158	505.0	COG2020@1|root,COG2020@2|Bacteria,1NFH1@1224|Proteobacteria,1SDM5@1236|Gammaproteobacteria	1236|Gammaproteobacteria	O	Ergosterol biosynthesis ERG4/ERG24 family	-	-	1.3.1.21,1.3.1.71	ko:K00213,ko:K00223	ko00100,ko01100,ko01110,ko01130,map00100,map01100,map01110,map01130	M00101,M00102	R01451,R01456,R05641,R07487,R07492	RC00138,RC00237	ko00000,ko00001,ko00002,ko01000	-	-	-	ERG4_ERG24
BYD3_k127_7759085_4	1299327.I546_3498	2.843e-59	214.0	COG0300@1|root,COG0300@2|Bacteria,2I8RA@201174|Actinobacteria,2369X@1762|Mycobacteriaceae	201174|Actinobacteria	S	short-chain dehydrogenase	-	-	-	ko:K07124	-	-	-	-	ko00000	-	-	-	adh_short
BYD3_k127_7761974_1	471854.Dfer_1959	1.133e-63	223.0	COG2318@1|root,COG2318@2|Bacteria,4NNRD@976|Bacteroidetes,47PZE@768503|Cytophagia	976|Bacteroidetes	S	DinB family	-	-	-	-	-	-	-	-	-	-	-	-	DinB
BYD3_k127_7761974_0	1123278.KB893410_gene52	5.23e-222	700.0	COG0025@1|root,COG0025@2|Bacteria,4NFHG@976|Bacteroidetes,47KAJ@768503|Cytophagia	976|Bacteroidetes	P	NhaP-type Na H and K H	-	-	-	ko:K03316	-	-	-	-	ko00000	2.A.36	-	-	Na_H_Exchanger
BYD3_k127_7761974_2	1121875.KB907550_gene717	1.425e-60	227.0	COG0457@1|root,COG2114@1|root,COG0457@2|Bacteria,COG2114@2|Bacteria,4NEVN@976|Bacteroidetes,1HYQY@117743|Flavobacteriia	976|Bacteroidetes	T	Belongs to the adenylyl cyclase class-4 guanylyl cyclase family	-	-	4.6.1.1	ko:K01768	ko00230,ko02025,ko04113,ko04213,map00230,map02025,map04113,map04213	M00695	R00089,R00434	RC00295	ko00000,ko00001,ko00002,ko01000	-	-	-	Guanylate_cyc,TPR_12,TPR_8
BYD3_k127_777743_0	1313421.JHBV01000043_gene3214	1.976e-101	340.0	COG2222@1|root,COG2222@2|Bacteria,4NIX0@976|Bacteroidetes	976|Bacteroidetes	M	Bifunctional phosphoglucose phosphomannose isomerase	-	-	5.3.1.8,5.3.1.9	ko:K15916	ko00010,ko00030,ko00051,ko00500,ko00520,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00030,map00051,map00500,map00520,map01100,map01110,map01120,map01130,map01200	M00001,M00004,M00114	R01819,R02739,R02740,R03321	RC00376,RC00563	ko00000,ko00001,ko00002,ko01000	-	-	-	SIS,bact-PGI_C
BYD3_k127_777743_1	1408433.JHXV01000036_gene236	3.603e-46	170.0	COG1028@1|root,COG1028@2|Bacteria,4NEAI@976|Bacteroidetes,1HXDZ@117743|Flavobacteriia,2PA7F@246874|Cryomorphaceae	976|Bacteroidetes	IQ	PFAM short chain dehydrogenase	fabG	-	1.1.1.100	ko:K00059	ko00061,ko00333,ko00780,ko01040,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01040,map01100,map01130,map01212	M00083,M00572	R04533,R04534,R04536,R04543,R04566,R04953,R04964,R07759,R07763,R10116,R10120,R11671	RC00029,RC00117	ko00000,ko00001,ko00002,ko01000,ko01004	-	-	-	adh_short_C2
BYD3_k127_7813316_2	1123248.KB893322_gene589	1.074e-60	210.0	COG1190@1|root,COG1190@2|Bacteria,4NDZN@976|Bacteroidetes,1IQRC@117747|Sphingobacteriia	976|Bacteroidetes	J	Belongs to the class-II aminoacyl-tRNA synthetase family	lysS	-	6.1.1.6	ko:K04567	ko00970,map00970	M00359,M00360	R03658	RC00055,RC00523	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	-	-	-	DUF4332,tRNA-synt_2,tRNA_anti-codon
BYD3_k127_7813316_1	1123248.KB893322_gene588	1.029e-129	418.0	COG1028@1|root,COG1028@2|Bacteria,4NIAZ@976|Bacteroidetes,1IUVU@117747|Sphingobacteriia	976|Bacteroidetes	IQ	KR domain	-	-	-	ko:K13775	ko00281,map00281	-	R08087,R08096,R10125,R10126	RC00080,RC00087	ko00000,ko00001	-	-	-	adh_short
BYD3_k127_7813316_0	1267211.KI669560_gene210	4.963e-167	529.0	COG0667@1|root,COG0667@2|Bacteria,4NFCN@976|Bacteroidetes,1IQIA@117747|Sphingobacteriia	976|Bacteroidetes	C	potassium channel beta subunit	-	-	-	-	-	-	-	-	-	-	-	-	Aldo_ket_red
BYD3_k127_7813316_3	929713.NIASO_14905	5.476e-19	87.0	COG3117@1|root,COG3117@2|Bacteria,4NV8G@976|Bacteroidetes,1IU6N@117747|Sphingobacteriia	976|Bacteroidetes	S	Lipopolysaccharide-assembly, LptC-related	-	-	-	-	-	-	-	-	-	-	-	-	LptC
BYD3_k127_782827_4	760192.Halhy_4808	3.159e-65	228.0	COG0807@1|root,COG0807@2|Bacteria,4PNQF@976|Bacteroidetes,1J0XM@117747|Sphingobacteriia	976|Bacteroidetes	H	GTP cyclohydrolase II	ribA	-	-	-	-	-	-	-	-	-	-	-	GTP_cyclohydro2
BYD3_k127_782827_0	411154.GFO_1816	2.935e-252	802.0	COG2120@1|root,COG2120@2|Bacteria,4NE9K@976|Bacteroidetes,1HX7T@117743|Flavobacteriia	976|Bacteroidetes	G	LmbE family	-	-	-	-	-	-	-	-	-	-	-	-	PIG-L
BYD3_k127_782827_1	1286632.P278_08370	4.025e-191	611.0	COG0591@1|root,COG0591@2|Bacteria,4NEN8@976|Bacteroidetes,1HYVB@117743|Flavobacteriia	976|Bacteroidetes	E	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family	yidK	-	-	-	-	-	-	-	-	-	-	-	SSF
BYD3_k127_782827_2	926559.JoomaDRAFT_3524	1.52e-80	277.0	COG0790@1|root,COG0790@2|Bacteria,4NGW3@976|Bacteroidetes,1HY27@117743|Flavobacteriia	976|Bacteroidetes	S	Protein of unknown function (DUF2911)	-	-	-	-	-	-	-	-	-	-	-	-	DUF2911
BYD3_k127_782827_3	1185876.BN8_03230	2.724e-71	252.0	COG1234@1|root,COG1234@2|Bacteria,4NE1K@976|Bacteroidetes,47KGX@768503|Cytophagia	976|Bacteroidetes	S	Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA	rnz	GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004540,GO:0006139,GO:0006396,GO:0006399,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0031123,GO:0034414,GO:0034470,GO:0034641,GO:0034660,GO:0042779,GO:0042780,GO:0042781,GO:0043170,GO:0043628,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0140098,GO:1901360,GO:1905267	3.1.26.11	ko:K00784	ko03013,map03013	-	-	-	ko00000,ko00001,ko01000,ko03016	-	-	-	Lactamase_B_2
BYD3_k127_782827_5	760192.Halhy_5177	7.893e-43	158.0	COG1366@1|root,COG1366@2|Bacteria,4NTPB@976|Bacteroidetes,1ISU9@117747|Sphingobacteriia	976|Bacteroidetes	T	transporter antisigma-factor antagonist STAS	-	-	-	-	-	-	-	-	-	-	-	-	STAS,STAS_2
BYD3_k127_7832573_1	760192.Halhy_0071	3.253e-73	258.0	COG0117@1|root,COG1985@1|root,COG0117@2|Bacteria,COG1985@2|Bacteria,4NFJE@976|Bacteroidetes,1IP03@117747|Sphingobacteriia	976|Bacteroidetes	H	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate	ribD	-	1.1.1.193,3.5.4.26	ko:K11752	ko00740,ko01100,ko01110,ko02024,map00740,map01100,map01110,map02024	M00125	R03458,R03459	RC00204,RC00933	ko00000,ko00001,ko00002,ko01000	-	-	-	RibD_C,dCMP_cyt_deam_1
BYD3_k127_7832573_2	765952.PUV_10980	1.107e-48	181.0	COG0580@1|root,COG0580@2|Bacteria	2|Bacteria	U	water channel activity	glpF	-	-	ko:K02440,ko:K06188	-	-	-	-	ko00000,ko02000	1.A.8,1.A.8.1,1.A.8.2	-	-	MIP
BYD3_k127_7832573_0	1122176.KB903531_gene3044	2.043e-87	300.0	COG0322@1|root,COG0847@1|root,COG0322@2|Bacteria,COG0847@2|Bacteria,4NEQX@976|Bacteroidetes,1IQ4K@117747|Sphingobacteriia	976|Bacteroidetes	L	DNA polymerase III, epsilon subunit	-	-	2.7.7.7	ko:K02342	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	M00260	R00375,R00376,R00377,R00378	RC02795	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	-	-	-	GIY-YIG,RNase_T
BYD3_k127_7839505_1	760192.Halhy_0107	3.539e-128	421.0	COG1092@1|root,COG1092@2|Bacteria,4NG9S@976|Bacteroidetes,1INTU@117747|Sphingobacteriia	976|Bacteroidetes	J	PUA domain containing protein	rlmI	-	2.1.1.191	ko:K06969	-	-	-	-	ko00000,ko01000,ko03009	-	-	-	Methyltrans_SAM
BYD3_k127_7839505_2	1408433.JHXV01000002_gene456	2.668e-97	324.0	COG1024@1|root,COG1024@2|Bacteria,4NHRF@976|Bacteroidetes,1HXUI@117743|Flavobacteriia,2PA7H@246874|Cryomorphaceae	976|Bacteroidetes	I	Enoyl-CoA hydratase/isomerase	-	-	5.3.3.18	ko:K15866	ko00360,ko01120,map00360,map01120	-	R09837,R09839	RC00004,RC00326,RC02689,RC03003	ko00000,ko00001,ko01000	-	-	-	ECH_1
BYD3_k127_7839505_0	1296416.JACB01000061_gene2048	7.041e-132	430.0	COG1250@1|root,COG1250@2|Bacteria,4NF2W@976|Bacteroidetes,1HXCF@117743|Flavobacteriia,2YGJW@290174|Aquimarina	976|Bacteroidetes	I	3-hydroxyacyl-CoA dehydrogenase, NAD binding domain	paaH	-	1.1.1.157	ko:K00074	ko00360,ko00362,ko00650,ko01100,ko01120,map00360,map00362,map00650,map01100,map01120	-	R01976,R05576,R06941	RC00029,RC00117	ko00000,ko00001,ko01000	-	-	-	3HCDH,3HCDH_N
BYD3_k127_7839505_3	700598.Niako_6202	9.327e-47	172.0	COG2050@1|root,COG2050@2|Bacteria,4NM7W@976|Bacteroidetes,1IYJ0@117747|Sphingobacteriia	976|Bacteroidetes	Q	Thioesterase superfamily	paaI	-	-	ko:K02614	ko00360,map00360	-	R09840	RC00004,RC00014	ko00000,ko00001,ko01000	-	-	-	4HBT
BYD3_k127_7846189_2	1123277.KB893184_gene4142	4.438e-12	71.0	2DR79@1|root,33AIG@2|Bacteria,4NYDE@976|Bacteroidetes	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_7846189_0	700598.Niako_5189	4.494e-185	607.0	COG0443@1|root,COG0443@2|Bacteria,4NEHZ@976|Bacteroidetes,1IQ1C@117747|Sphingobacteriia	976|Bacteroidetes	O	heat shock protein 70	-	-	-	ko:K04043,ko:K04044	ko03018,ko04212,ko05152,map03018,map04212,map05152	-	-	-	ko00000,ko00001,ko03019,ko03029,ko03110,ko04147	1.A.33,1.A.33.1	-	-	HSP70
BYD3_k127_7846189_1	1313301.AUGC01000005_gene226	1.782e-152	487.0	COG3958@1|root,COG3958@2|Bacteria,4NEI8@976|Bacteroidetes	976|Bacteroidetes	G	Transketolase	dxs	-	2.2.1.1	ko:K00615	ko00030,ko00710,ko01051,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00710,map01051,map01100,map01110,map01120,map01130,map01200,map01230	M00004,M00007,M00165,M00167	R01067,R01641,R01830,R06590	RC00032,RC00226,RC00571,RC01560	ko00000,ko00001,ko00002,ko01000	-	-	-	Transket_pyr,Transketolase_C
BYD3_k127_784979_0	504472.Slin_2522	4.803e-175	563.0	COG3408@1|root,COG3408@2|Bacteria,4NF09@976|Bacteroidetes,47M96@768503|Cytophagia	976|Bacteroidetes	G	Glycogen debranching enzyme	-	-	-	-	-	-	-	-	-	-	-	-	GDE_C,GDE_N
BYD3_k127_784979_3	1279009.ADICEAN_01562	1.974e-14	79.0	COG3204@1|root,COG3204@2|Bacteria,4NNIP@976|Bacteroidetes,47NSY@768503|Cytophagia	976|Bacteroidetes	S	SdiA-regulated	-	-	-	-	-	-	-	-	-	-	-	-	SdiA-regulated
BYD3_k127_784979_2	1121373.KB903625_gene3152	6.384e-18	89.0	COG3212@1|root,COG3212@2|Bacteria,4NW2C@976|Bacteroidetes,47SFI@768503|Cytophagia	976|Bacteroidetes	S	peptidase	-	-	-	-	-	-	-	-	-	-	-	-	PepSY_like
BYD3_k127_784979_4	1123276.KB893270_gene4742	1.377e-09	66.0	2DQ3Y@1|root,334MD@2|Bacteria,4PPRS@976|Bacteroidetes,47YR5@768503|Cytophagia	976|Bacteroidetes	S	Putative beta-lactamase-inhibitor-like, PepSY-like	-	-	-	-	-	-	-	-	-	-	-	-	PepSY_like
BYD3_k127_784979_1	1122179.KB890425_gene3526	3.891e-40	151.0	2BV6Z@1|root,32QKE@2|Bacteria,4PCAH@976|Bacteroidetes,1IZE7@117747|Sphingobacteriia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_7887674_1	1250232.JQNJ01000001_gene1580	4.487e-209	671.0	COG3118@1|root,COG3118@2|Bacteria,4PND9@976|Bacteroidetes,1IKUJ@117743|Flavobacteriia	976|Bacteroidetes	O	ASPIC and UnbV	-	-	-	-	-	-	-	-	-	-	-	-	UnbV_ASPIC,VCBS
BYD3_k127_7887674_9	1123248.KB893322_gene669	1.085e-26	117.0	COG3047@1|root,COG3047@2|Bacteria	2|Bacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	DUF3943,OMP_b-brl,OMP_b-brl_2
BYD3_k127_7887674_10	929562.Emtol_2557	3.867e-24	110.0	COG3047@1|root,COG3047@2|Bacteria,4NSNH@976|Bacteroidetes,47R79@768503|Cytophagia	976|Bacteroidetes	M	Outer membrane protein beta-barrel domain	-	-	-	-	-	-	-	-	-	-	-	-	OMP_b-brl,OMP_b-brl_2
BYD3_k127_7887674_7	1341155.FSS13T_01840	3.974e-60	211.0	COG2010@1|root,COG2010@2|Bacteria,4NMD5@976|Bacteroidetes,1I1GF@117743|Flavobacteriia,2NVGE@237|Flavobacterium	976|Bacteroidetes	C	Cytochrome c	-	-	-	-	-	-	-	-	-	-	-	-	Cytochrom_C
BYD3_k127_7887674_0	1341181.FLJC2902T_06080	0.0	1178.0	COG4263@1|root,COG4263@2|Bacteria,4NFNE@976|Bacteroidetes,1HYUT@117743|Flavobacteriia,2NSJJ@237|Flavobacterium	976|Bacteroidetes	C	Nitrous oxide reductase	nosZ	-	1.7.2.4	ko:K00376	ko00910,ko01120,map00910,map01120	M00529	R02804	RC02861	ko00000,ko00001,ko00002,ko01000	-	-	-	-
BYD3_k127_7887674_4	1267211.KI669560_gene1635	3.171e-102	343.0	COG4314@1|root,COG4314@2|Bacteria,4NIPU@976|Bacteroidetes,1IR80@117747|Sphingobacteriia	976|Bacteroidetes	C	lipoprotein involved in nitrous oxide reduction	-	-	-	ko:K19342	-	-	-	-	ko00000	-	-	-	NosL
BYD3_k127_7887674_2	1341155.FSS13T_01880	6.445e-189	598.0	COG3420@1|root,COG3420@2|Bacteria,4NEGT@976|Bacteroidetes,1HXK5@117743|Flavobacteriia,2NTN7@237|Flavobacterium	976|Bacteroidetes	P	Periplasmic copper-binding protein (NosD)	nosD	-	-	ko:K07218	-	-	-	-	ko00000	-	-	-	NosD
BYD3_k127_7887674_6	1121896.JMLU01000024_gene2532	2.876e-98	326.0	COG1131@1|root,COG1131@2|Bacteria,4NG9T@976|Bacteroidetes,1HYYD@117743|Flavobacteriia,2NU88@237|Flavobacterium	976|Bacteroidetes	V	ATPases associated with a variety of cellular activities	-	-	-	ko:K19340	ko02010,map02010	M00762	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.132.2	-	-	ABC_tran
BYD3_k127_7887674_5	1121889.AUDM01000004_gene2636	1.118e-99	331.0	COG1277@1|root,COG1277@2|Bacteria,4NGGR@976|Bacteroidetes,1HXF5@117743|Flavobacteriia,2NUI3@237|Flavobacterium	976|Bacteroidetes	S	ABC-2 family transporter protein	-	-	-	ko:K19341	ko02010,map02010	M00762	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.132.2	-	-	ABC2_membrane_2,ABC2_membrane_5
BYD3_k127_7887674_8	1121899.Q764_07530	9.473e-59	209.0	COG2335@1|root,COG2335@2|Bacteria,4NMPI@976|Bacteroidetes,1I1DK@117743|Flavobacteriia,2P06C@237|Flavobacterium	976|Bacteroidetes	M	Four repeated domains in the Fasciclin I family of proteins, present in many other contexts.	-	-	-	-	-	-	-	-	-	-	-	-	Fasciclin
BYD3_k127_7887674_3	1121899.Q764_07535	3.334e-104	352.0	COG2010@1|root,COG2010@2|Bacteria,4NHY4@976|Bacteroidetes,1I00C@117743|Flavobacteriia,2NUFJ@237|Flavobacterium	976|Bacteroidetes	C	Cytochrome c	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_7887674_12	1434325.AZQN01000001_gene680	3.417e-20	98.0	COG3047@1|root,COG3047@2|Bacteria,4NSNH@976|Bacteroidetes,47R79@768503|Cytophagia	976|Bacteroidetes	M	Outer membrane protein beta-barrel domain	-	-	-	-	-	-	-	-	-	-	-	-	OMP_b-brl,OMP_b-brl_2
BYD3_k127_7887674_11	1122176.KB903554_gene4008	4.627e-24	106.0	COG3292@1|root,COG4257@1|root,COG4585@1|root,COG3292@2|Bacteria,COG4257@2|Bacteria,COG4585@2|Bacteria,4NHSC@976|Bacteroidetes	976|Bacteroidetes	T	Two component regulator propeller	-	-	-	-	-	-	-	-	-	-	-	-	HisKA_3,Reg_prop,SpoIIE,Y_Y_Y
BYD3_k127_790758_0	760192.Halhy_2931	1.434e-153	490.0	COG3491@1|root,COG3491@2|Bacteria,4NED5@976|Bacteroidetes,1IR2B@117747|Sphingobacteriia	976|Bacteroidetes	C	Belongs to the iron ascorbate-dependent oxidoreductase family	-	-	-	-	-	-	-	-	-	-	-	-	2OG-FeII_Oxy,DIOX_N
BYD3_k127_790758_2	760192.Halhy_2930	7.128e-79	279.0	COG5504@1|root,COG5504@2|Bacteria,4NFZP@976|Bacteroidetes,1IPUT@117747|Sphingobacteriia	976|Bacteroidetes	O	Gliding motility protein, GldB	gldB	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_790758_1	1122176.KB903546_gene1006	1.311e-96	323.0	COG0157@1|root,COG0157@2|Bacteria,4NDXF@976|Bacteroidetes,1INNF@117747|Sphingobacteriia	976|Bacteroidetes	H	Belongs to the NadC ModD family	nadC	-	2.4.2.19	ko:K00767	ko00760,ko01100,map00760,map01100	M00115	R03348	RC02877	ko00000,ko00001,ko00002,ko01000	-	-	-	QRPTase_C,QRPTase_N
BYD3_k127_7940248_1	1123248.KB893326_gene1312	1.376e-134	439.0	COG1109@1|root,COG1109@2|Bacteria,4NG3H@976|Bacteroidetes,1IP3X@117747|Sphingobacteriia	976|Bacteroidetes	G	Phosphoglucomutase phosphomannomutase alpha beta alpha domain I	glmM	-	5.4.2.8	ko:K01840	ko00051,ko00520,ko01100,ko01110,ko01130,map00051,map00520,map01100,map01110,map01130	M00114	R01818	RC00408	ko00000,ko00001,ko00002,ko01000	-	-	-	PGM_PMM_I,PGM_PMM_II,PGM_PMM_III,PGM_PMM_IV
BYD3_k127_7940248_6	1538644.KO02_14730	5.061e-44	166.0	COG0671@1|root,COG0671@2|Bacteria,4NNVQ@976|Bacteroidetes,1ISC5@117747|Sphingobacteriia	976|Bacteroidetes	I	Phosphoesterase PA-phosphatase related	-	-	3.6.1.27	ko:K19302	ko00550,map00550	-	R05627	RC00002	ko00000,ko00001,ko01000,ko01011	-	-	-	PAP2
BYD3_k127_7940248_2	760192.Halhy_5771	1.475e-119	390.0	COG0190@1|root,COG0190@2|Bacteria,4NEJP@976|Bacteroidetes,1IQDT@117747|Sphingobacteriia	976|Bacteroidetes	H	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate	folD	GO:0003674,GO:0003824,GO:0004477,GO:0004488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006730,GO:0008150,GO:0008152,GO:0009987,GO:0016491,GO:0016645,GO:0016646,GO:0016787,GO:0016810,GO:0016814,GO:0019238,GO:0044237,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0055114	1.5.1.5,3.5.4.9	ko:K01491	ko00670,ko00720,ko01100,ko01120,ko01200,map00670,map00720,map01100,map01120,map01200	M00140,M00377	R01220,R01655	RC00202,RC00578	ko00000,ko00001,ko00002,ko01000	-	-	-	THF_DHG_CYH,THF_DHG_CYH_C
BYD3_k127_7940248_4	760192.Halhy_5773	2.155e-63	227.0	COG2264@1|root,COG2264@2|Bacteria,4NFRW@976|Bacteroidetes,1IQ5D@117747|Sphingobacteriia	976|Bacteroidetes	J	Ribosomal protein L11 methyltransferase	prmA	-	-	ko:K02687	-	-	-	-	ko00000,ko01000,ko03009	-	-	-	PrmA
BYD3_k127_7940248_5	1122176.KB903619_gene5368	7.631e-54	196.0	COG0424@1|root,COG0424@2|Bacteria,4NNXV@976|Bacteroidetes,1ISD6@117747|Sphingobacteriia	976|Bacteroidetes	D	Maf-like protein	maf	-	-	ko:K06287	-	-	-	-	ko00000	-	-	-	Maf
BYD3_k127_7940248_0	760192.Halhy_6035	6.752e-291	904.0	COG0365@1|root,COG0365@2|Bacteria,4NEAD@976|Bacteroidetes,1IPSM@117747|Sphingobacteriia	976|Bacteroidetes	I	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA	acsA	-	6.2.1.1	ko:K01895	ko00010,ko00620,ko00640,ko00680,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00620,map00640,map00680,map00720,map01100,map01110,map01120,map01130,map01200	M00357	R00235,R00236,R00316,R00926,R01354	RC00004,RC00012,RC00043,RC00070,RC02746,RC02816	ko00000,ko00001,ko00002,ko01000,ko01004	-	-	-	ACAS_N,AMP-binding,AMP-binding_C
BYD3_k127_7940248_7	1121904.ARBP01000003_gene6163	9.958e-33	138.0	COG0382@1|root,COG0382@2|Bacteria,4NGNA@976|Bacteroidetes,47MCK@768503|Cytophagia	976|Bacteroidetes	H	PFAM UbiA prenyltransferase	ubiA	-	2.5.1.39	ko:K03179	ko00130,ko01100,ko01110,map00130,map01100,map01110	M00117	R05000,R05615	RC00209,RC02895	ko00000,ko00001,ko00002,ko01000,ko01006	-	-	-	UbiA
BYD3_k127_7940248_3	760192.Halhy_6353	5.852e-66	228.0	COG0464@1|root,COG0464@2|Bacteria,4NJBD@976|Bacteroidetes,1ISED@117747|Sphingobacteriia	976|Bacteroidetes	O	of the AAA class	-	-	-	-	-	-	-	-	-	-	-	-	AAA
BYD3_k127_7989116_0	929703.KE386491_gene1773	1.654e-311	971.0	COG1629@1|root,COG4771@2|Bacteria,4NF66@976|Bacteroidetes,47JMC@768503|Cytophagia	976|Bacteroidetes	P	Carboxypeptidase regulatory-like domain	-	-	-	-	-	-	-	-	-	-	-	-	CarboxypepD_reg,Plug,TonB_dep_Rec
BYD3_k127_7989116_3	1124780.ANNU01000017_gene1931	2.643e-30	121.0	COG0759@1|root,COG0759@2|Bacteria,4NV1N@976|Bacteroidetes,47RUP@768503|Cytophagia	976|Bacteroidetes	S	Could be involved in insertion of integral membrane proteins into the membrane	-	-	-	ko:K08998	-	-	-	-	ko00000	-	-	-	Haemolytic
BYD3_k127_7989116_4	1122176.KB903532_gene2622	4.234e-21	100.0	2AE6H@1|root,30WB0@2|Bacteria,4P9QI@976|Bacteroidetes,1IZ9B@117747|Sphingobacteriia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_7989116_1	926556.Echvi_2430	3.21e-233	726.0	COG0499@1|root,COG0499@2|Bacteria,4NEKE@976|Bacteroidetes,47KGI@768503|Cytophagia	976|Bacteroidetes	H	May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine	ahcY	GO:0000096,GO:0003674,GO:0003824,GO:0004013,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006520,GO:0006534,GO:0006555,GO:0006575,GO:0006725,GO:0006732,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009066,GO:0009069,GO:0009116,GO:0009119,GO:0009987,GO:0016787,GO:0016801,GO:0016802,GO:0017144,GO:0019752,GO:0033353,GO:0034641,GO:0042278,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046128,GO:0046439,GO:0046483,GO:0046498,GO:0046500,GO:0051186,GO:0055086,GO:0071704,GO:0072521,GO:1901135,GO:1901360,GO:1901564,GO:1901605,GO:1901657	3.3.1.1	ko:K01251	ko00270,ko01100,map00270,map01100	M00035	R00192,R04936	RC00056,RC00069,RC01161,RC01243	ko00000,ko00001,ko00002,ko01000,ko01009,ko04147	-	-	-	AdoHcyase,AdoHcyase_NAD
BYD3_k127_7989116_2	1123276.KB893246_gene906	2.476e-37	143.0	COG0251@1|root,COG0251@2|Bacteria,4NU67@976|Bacteroidetes,47RE6@768503|Cytophagia	976|Bacteroidetes	J	Endoribonuclease L-PSP	-	-	-	-	-	-	-	-	-	-	-	-	Ribonuc_L-PSP
BYD3_k127_8002357_1	1137281.D778_00550	2.257e-54	194.0	2DM8U@1|root,3273Z@2|Bacteria,4NQC2@976|Bacteroidetes,1I2Y5@117743|Flavobacteriia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_8002357_2	1120966.AUBU01000018_gene252	1.239e-20	101.0	2DM40@1|root,31MRJ@2|Bacteria,4NPHT@976|Bacteroidetes,47SI8@768503|Cytophagia	976|Bacteroidetes	S	Protein of unknown function (DUF3667)	-	-	-	-	-	-	-	-	-	-	-	-	DUF3667
BYD3_k127_8002357_0	525373.HMPREF0766_13281	1.1e-65	228.0	COG1670@1|root,COG1670@2|Bacteria,4NNXN@976|Bacteroidetes,1IXQW@117747|Sphingobacteriia	976|Bacteroidetes	J	Acetyltransferase (GNAT) domain	-	-	-	-	-	-	-	-	-	-	-	-	Acetyltransf_3
BYD3_k127_8004426_1	700598.Niako_4381	1.915e-187	589.0	COG2957@1|root,COG2957@2|Bacteria,4NGF8@976|Bacteroidetes,1IP6F@117747|Sphingobacteriia	976|Bacteroidetes	E	Belongs to the agmatine deiminase family	aguA	-	3.5.3.12	ko:K10536	ko00330,ko01100,map00330,map01100	-	R01416	RC00177	ko00000,ko00001,ko01000	-	-	-	PAD_porph
BYD3_k127_8004426_2	700598.Niako_4382	2.794e-167	527.0	COG0388@1|root,COG0388@2|Bacteria,4NEME@976|Bacteroidetes,1IPIY@117747|Sphingobacteriia	976|Bacteroidetes	S	PFAM Nitrilase cyanide hydratase and apolipoprotein N-acyltransferase	pabB	-	3.5.1.53,3.5.1.6	ko:K01431,ko:K12251	ko00240,ko00330,ko00410,ko00770,ko00983,ko01100,map00240,map00330,map00410,map00770,map00983,map01100	M00046	R00905,R01152,R04666,R08228	RC00096	ko00000,ko00001,ko00002,ko01000	-	-	-	CN_hydrolase
BYD3_k127_8004426_0	700598.Niako_0113	1.355e-297	924.0	COG2352@1|root,COG2352@2|Bacteria,4NFC0@976|Bacteroidetes,1IR3G@117747|Sphingobacteriia	976|Bacteroidetes	C	Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle	ppc	-	4.1.1.31	ko:K01595	ko00620,ko00680,ko00710,ko00720,ko01100,ko01120,ko01200,map00620,map00680,map00710,map00720,map01100,map01120,map01200	M00168,M00170,M00171,M00172,M00173,M00346,M00374	R00345	RC02741	ko00000,ko00001,ko00002,ko01000	-	-	-	PEPcase
BYD3_k127_8015162_2	468059.AUHA01000003_gene1857	4.783e-170	537.0	COG0367@1|root,COG0367@2|Bacteria,4NFQ3@976|Bacteroidetes,1IR5W@117747|Sphingobacteriia	976|Bacteroidetes	E	asparagine synthase	asnB	-	6.3.5.4	ko:K01953	ko00250,ko01100,ko01110,map00250,map01100,map01110	-	R00578	RC00010	ko00000,ko00001,ko01000,ko01002	-	-	-	Asn_synthase,GATase_7
BYD3_k127_8015162_0	1122179.KB890432_gene4121	1.396e-246	777.0	COG0365@1|root,COG0365@2|Bacteria,4NINZ@976|Bacteroidetes,1IPMF@117747|Sphingobacteriia	976|Bacteroidetes	I	Acetyl-coenzyme A synthetase N-terminus	-	-	6.2.1.16	ko:K01907	ko00280,ko00650,map00280,map00650	-	R01357	RC00004,RC00014	ko00000,ko00001,ko01000,ko01004	-	-	-	ACAS_N,AMP-binding,AMP-binding_C
BYD3_k127_8015162_1	1123248.KB893370_gene5145	1.143e-186	591.0	COG4770@1|root,COG4770@2|Bacteria,4NM1W@976|Bacteroidetes,1IPSQ@117747|Sphingobacteriia	976|Bacteroidetes	I	TIGRFAM acetyl-CoA carboxylase, biotin carboxylase	-	-	6.3.4.14,6.4.1.2,6.4.1.3,6.4.1.4	ko:K01961,ko:K01965,ko:K01968	ko00061,ko00280,ko00620,ko00630,ko00640,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00061,map00280,map00620,map00630,map00640,map00720,map01100,map01110,map01120,map01130,map01200,map01212	M00036,M00082,M00373,M00376,M00741	R00742,R01859,R04138,R04385	RC00040,RC00097,RC00253,RC00367,RC00609,RC00942	ko00000,ko00001,ko00002,ko01000	-	-	-	Biotin_carb_C,Biotin_carb_N,CPSase_L_D2
BYD3_k127_8029985_3	1353529.M899_2374	1.534e-09	70.0	COG2911@1|root,COG3210@1|root,COG2911@2|Bacteria,COG3210@2|Bacteria,1N928@1224|Proteobacteria	1224|Proteobacteria	M	Chaperone of endosialidase	-	-	-	-	-	-	-	-	-	-	-	-	Peptidase_S74
BYD3_k127_8029985_0	700598.Niako_6080	1.183e-158	510.0	COG1055@1|root,COG1055@2|Bacteria,4NGP4@976|Bacteroidetes,1IVHN@117747|Sphingobacteriia	976|Bacteroidetes	P	COG1055 Na H antiporter NhaD and related arsenite	nhaD	-	-	-	-	-	-	-	-	-	-	-	CitMHS
BYD3_k127_8029985_1	1122605.KB893625_gene2110	3.12e-142	459.0	COG3239@1|root,COG3239@2|Bacteria,4NHPQ@976|Bacteroidetes	976|Bacteroidetes	I	fatty acid desaturase	-	-	-	-	-	-	-	-	-	-	-	-	FA_desaturase
BYD3_k127_8029985_2	929556.Solca_3574	7.937e-51	190.0	COG0392@1|root,COG0392@2|Bacteria,4NMZ1@976|Bacteroidetes,1IRX8@117747|Sphingobacteriia	976|Bacteroidetes	O	Uncharacterised protein family (UPF0104)	-	-	-	ko:K07027	-	-	-	-	ko00000,ko02000	4.D.2	-	-	LPG_synthase_TM
BYD3_k127_805324_0	1123277.KB893243_gene167	1.926e-133	440.0	COG3291@1|root,COG3291@2|Bacteria,4NEMU@976|Bacteroidetes	976|Bacteroidetes	N	Pregnancy-associated plasma protein-A	-	-	-	-	-	-	-	-	-	-	-	-	DUF1929,F5_F8_type_C,Laminin_G_3,Peptidase_M43
BYD3_k127_805324_1	761193.Runsl_1459	1.648e-110	370.0	COG2982@1|root,COG2982@2|Bacteria,4NIE2@976|Bacteroidetes,47M87@768503|Cytophagia	976|Bacteroidetes	M	Domain of Unknown Function (DUF748)	-	-	-	-	-	-	-	-	-	-	-	-	DUF748
BYD3_k127_805324_2	1189620.AJXL01000157_gene1980	3.54e-98	329.0	COG1295@1|root,COG1295@2|Bacteria,4NFG8@976|Bacteroidetes,1HX47@117743|Flavobacteriia,2NTZS@237|Flavobacterium	976|Bacteroidetes	S	ribonuclease BN	-	-	-	ko:K07058	-	-	-	-	ko00000	-	-	-	Virul_fac_BrkB
BYD3_k127_805324_3	714943.Mucpa_4688	4.623e-53	190.0	2C5VR@1|root,32CJG@2|Bacteria,4NQV8@976|Bacteroidetes,1ITMX@117747|Sphingobacteriia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_806569_0	401053.AciPR4_3641	1.714e-92	311.0	COG0076@1|root,COG0076@2|Bacteria,3Y365@57723|Acidobacteria,2JP4F@204432|Acidobacteriia	204432|Acidobacteriia	E	Pyridoxal-dependent decarboxylase conserved domain	-	-	-	-	-	-	-	-	-	-	-	-	Pyridoxal_deC
BYD3_k127_806569_1	760192.Halhy_6239	1.802e-89	300.0	COG0745@1|root,COG0745@2|Bacteria,4NMAC@976|Bacteroidetes,1J08E@117747|Sphingobacteriia	976|Bacteroidetes	T	Transcriptional regulatory protein, C terminal	-	-	-	-	-	-	-	-	-	-	-	-	Response_reg,Trans_reg_C
BYD3_k127_806569_2	760192.Halhy_6240	1.945e-75	270.0	COG0642@1|root,COG2205@2|Bacteria,4NEFW@976|Bacteroidetes	976|Bacteroidetes	T	Histidine kinase	-	-	2.7.13.3	ko:K07636	ko02020,map02020	M00434	-	-	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	-	-	-	HATPase_c,HisKA
BYD3_k127_8068125_2	471854.Dfer_2937	1.075e-12	70.0	COG1225@1|root,COG1225@2|Bacteria,4NNGK@976|Bacteroidetes,47PUA@768503|Cytophagia	976|Bacteroidetes	O	PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen	bcp	-	1.11.1.15	ko:K03564	-	-	-	-	ko00000,ko01000	-	-	-	AhpC-TSA
BYD3_k127_8068125_0	1122176.KB903552_gene3708	1.935e-127	428.0	COG0739@1|root,COG0739@2|Bacteria,4NED7@976|Bacteroidetes,1INUW@117747|Sphingobacteriia	976|Bacteroidetes	M	Peptidase, M23	-	-	-	-	-	-	-	-	-	-	-	-	Peptidase_M23
BYD3_k127_8068125_1	398720.MED217_12384	1.134e-75	266.0	COG1703@1|root,COG1703@2|Bacteria,4NE7Y@976|Bacteroidetes,1HWNS@117743|Flavobacteriia,2XIUQ@283735|Leeuwenhoekiella	976|Bacteroidetes	E	ArgK protein	argK	-	-	ko:K07588	-	-	-	-	ko00000,ko01000	-	-	-	ArgK
BYD3_k127_8068125_3	760192.Halhy_1349	2.73e-09	65.0	COG1884@1|root,COG1884@2|Bacteria,4NDVE@976|Bacteroidetes,1ISVN@117747|Sphingobacteriia	976|Bacteroidetes	I	Methylmalonyl-CoA mutase	mutA	-	5.4.99.2	ko:K01847	ko00280,ko00630,ko00640,ko00720,ko01100,ko01120,ko01200,map00280,map00630,map00640,map00720,map01100,map01120,map01200	M00373,M00376,M00741	R00833	RC00395	ko00000,ko00001,ko00002,ko01000	-	-	-	MM_CoA_mutase
BYD3_k127_8075463_0	760192.Halhy_5639	0.0	1087.0	COG0188@1|root,COG0188@2|Bacteria,4NDWQ@976|Bacteroidetes,1IQJH@117747|Sphingobacteriia	976|Bacteroidetes	L	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner	gyrA	-	5.99.1.3	ko:K02469	-	-	-	-	ko00000,ko01000,ko03032,ko03400	-	-	-	DNA_gyraseA_C,DNA_topoisoIV
BYD3_k127_8075463_1	1122176.KB903554_gene3895	4.647e-44	173.0	COG4783@1|root,COG4783@2|Bacteria	2|Bacteria	L	chaperone-mediated protein folding	-	-	-	ko:K08309	-	-	-	-	ko00000,ko01000,ko01011	-	GH23	-	BatD,TPR_16,TPR_2,TPR_6,TPR_8
BYD3_k127_8092102_0	1123037.AUDE01000020_gene3533	7.357e-174	571.0	COG2366@1|root,COG2366@2|Bacteria,4NEIX@976|Bacteroidetes,1HYJ1@117743|Flavobacteriia	976|Bacteroidetes	S	Protein related to penicillin acylase	-	-	3.5.1.11	ko:K01434	ko00311,ko01130,map00311,map01130	-	R02170	RC00166,RC00328	ko00000,ko00001,ko01000,ko01002	-	-	-	Penicil_amidase
BYD3_k127_8092102_1	1100721.ALKO01000037_gene316	2.265e-11	64.0	COG3022@1|root,COG3022@2|Bacteria,1MUAF@1224|Proteobacteria,2VH23@28216|Betaproteobacteria,4AA0Q@80864|Comamonadaceae	28216|Betaproteobacteria	S	Belongs to the UPF0246 family	yaaA	-	-	ko:K09861	-	-	-	-	ko00000	-	-	-	H2O2_YaaD
BYD3_k127_8117931_0	929562.Emtol_0921	8.26e-159	514.0	COG4772@1|root,COG4772@2|Bacteria,4NEUH@976|Bacteroidetes,47N13@768503|Cytophagia	976|Bacteroidetes	P	PFAM TonB-dependent Receptor Plug	-	-	-	-	-	-	-	-	-	-	-	-	CarbopepD_reg_2,Plug,TonB_dep_Rec
BYD3_k127_8117931_1	755732.Fluta_2067	2.61e-11	76.0	COG3291@1|root,COG3291@2|Bacteria	2|Bacteria	S	metallopeptidase activity	-	-	3.4.21.50	ko:K01337	-	-	-	-	ko00000,ko01000,ko01002	-	-	-	CHU_C,PKD,SprB
BYD3_k127_813001_0	760192.Halhy_5376	0.0	1038.0	COG1024@1|root,COG1250@1|root,COG1024@2|Bacteria,COG1250@2|Bacteria,4NF9D@976|Bacteroidetes,1IPN0@117747|Sphingobacteriia	976|Bacteroidetes	I	3-hydroxyacyl-CoA dehydrogenase	fadN	-	1.1.1.35	ko:K07516	ko00071,ko00362,ko00650,ko01100,ko01120,ko01200,ko01212,map00071,map00362,map00650,map01100,map01120,map01200,map01212	M00087	R01975,R04737,R04739,R04741,R04743,R04745,R04748,R05305	RC00029,RC00117	ko00000,ko00001,ko00002,ko01000	-	-	-	3HCDH,3HCDH_N,ECH_1
BYD3_k127_8156879_4	745718.JADT01000019_gene1483	3.284e-05	48.0	COG2730@1|root,COG3420@1|root,COG4412@1|root,COG2730@2|Bacteria,COG3420@2|Bacteria,COG4412@2|Bacteria,4NIBG@976|Bacteroidetes,1HYT8@117743|Flavobacteriia	976|Bacteroidetes	G	Belongs to the glycosyl hydrolase 5 (cellulase A) family	eglS	-	3.2.1.4	ko:K01179	ko00500,ko01100,map00500,map01100	-	R06200,R11307,R11308	-	ko00000,ko00001,ko01000	-	GH5,GH9	-	CBM_6,Cellulase
BYD3_k127_8156879_1	861299.J421_0834	1.288e-79	271.0	COG0431@1|root,COG0431@2|Bacteria	2|Bacteria	S	FMN reductase (NADPH) activity	MA20_24580	-	-	-	-	-	-	-	-	-	-	-	FMN_red
BYD3_k127_8156879_2	762903.Pedsa_1466	7.972e-75	254.0	COG2514@1|root,COG2514@2|Bacteria,4NMJC@976|Bacteroidetes,1ISH3@117747|Sphingobacteriia	976|Bacteroidetes	S	PFAM Glyoxalase Bleomycin resistance protein Dioxygenase superfamily	catE	-	1.13.11.2	ko:K07104	ko00361,ko00362,ko00622,ko00643,ko01100,ko01120,ko01220,map00361,map00362,map00622,map00643,map01100,map01120,map01220	M00569	R00816,R04089,R05295,R05404,R05406,R07795	RC00387,RC00643,RC01075,RC01364,RC01914	ko00000,ko00001,ko00002,ko01000	-	-	-	Glyoxalase
BYD3_k127_8156879_3	1121012.AUKX01000007_gene169	4.428e-44	165.0	COG0784@1|root,COG0784@2|Bacteria,4PPI6@976|Bacteroidetes,1IKNT@117743|Flavobacteriia,23IAH@178469|Arenibacter	976|Bacteroidetes	T	cheY-homologous receiver domain	-	-	-	-	-	-	-	-	-	-	-	-	Response_reg
BYD3_k127_8156879_0	1123278.KB893443_gene5357	7.569e-231	733.0	COG1352@1|root,COG2201@1|root,COG4251@1|root,COG1352@2|Bacteria,COG2201@2|Bacteria,COG4251@2|Bacteria,4NE3J@976|Bacteroidetes,47XZS@768503|Cytophagia	976|Bacteroidetes	T	Methyltransferase, chemotaxis proteins	-	-	2.1.1.80,3.1.1.61	ko:K13924	ko02020,ko02030,map02020,map02030	M00506	-	-	ko00000,ko00001,ko00002,ko01000,ko02022,ko02035	-	-	-	CheB_methylest,CheR,CheR_N,HATPase_c,HisKA,PAS,PAS_10,PAS_3,PAS_4,PAS_9
BYD3_k127_8164164_0	760192.Halhy_1832	1.28e-59	232.0	COG3210@1|root,COG3210@2|Bacteria,4P8KP@976|Bacteroidetes,1IYSQ@117747|Sphingobacteriia	976|Bacteroidetes	U	IMG reference gene	-	-	-	-	-	-	-	-	-	-	-	-	SprB
BYD3_k127_8164164_1	1122176.KB903549_gene1231	6.06e-44	177.0	COG2982@1|root,COG2982@2|Bacteria,4NHD3@976|Bacteroidetes,1IQUD@117747|Sphingobacteriia	976|Bacteroidetes	M	AsmA family	-	-	-	-	-	-	-	-	-	-	-	-	AsmA,AsmA_2,DUF3971
BYD3_k127_81650_0	929556.Solca_2043	4.516e-130	427.0	COG2270@1|root,COG2270@2|Bacteria,4NEKI@976|Bacteroidetes,1INX9@117747|Sphingobacteriia	976|Bacteroidetes	S	COGs COG2270 Permease of the major facilitator superfamily	-	-	-	ko:K06902	ko04138,map04138	-	-	-	ko00000,ko00001,ko02000,ko04131	2.A.1.24,9.A.15.1	-	-	ATG22
BYD3_k127_81650_2	1178825.ALIH01000019_gene1232	4.575e-40	153.0	2DM52@1|root,32UG7@2|Bacteria,4NSYJ@976|Bacteroidetes,1I4AH@117743|Flavobacteriia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	Lipocalin_4
BYD3_k127_81650_3	10228.TriadP62797	1.403e-30	138.0	COG0457@1|root,KOG1840@2759|Eukaryota	2759|Eukaryota	C	determination of stomach left/right asymmetry	-	-	-	-	-	-	-	-	-	-	-	-	PH,TPR_10,TPR_12,TPR_2,TPR_7,TPR_8
BYD3_k127_81650_1	700598.Niako_0691	7.267e-52	193.0	COG0457@1|root,COG4585@1|root,COG0457@2|Bacteria,COG4585@2|Bacteria,4NI1V@976|Bacteroidetes	976|Bacteroidetes	T	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase	-	-	-	-	-	-	-	-	-	-	-	-	HATPase_c,HisKA_3,TPR_10,TPR_12
BYD3_k127_8224787_3	886377.Murru_0443	5.319e-11	63.0	2AF0Z@1|root,314Z9@2|Bacteria,4P7CF@976|Bacteroidetes,1IAXW@117743|Flavobacteriia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_8224787_0	1121377.KB906401_gene3384	4.721e-138	473.0	COG3903@1|root,COG3903@2|Bacteria	2|Bacteria	K	ADP binding	-	-	-	-	-	-	-	-	-	-	-	-	AAA_16,AAA_22,BTAD,DUF4062,GerE,NB-ARC,TPR_12
BYD3_k127_8224787_2	388413.ALPR1_14779	5.827e-29	119.0	COG2388@1|root,COG2388@2|Bacteria,4NUS6@976|Bacteroidetes,47RZM@768503|Cytophagia	976|Bacteroidetes	S	GCN5-related N-acetyl-transferase	-	-	-	ko:K06975	-	-	-	-	ko00000	-	-	-	Acetyltransf_CG
BYD3_k127_8224787_1	1288963.ADIS_4596	1.534e-50	182.0	COG0315@1|root,COG0521@1|root,COG0315@2|Bacteria,COG0521@2|Bacteria,4NHA0@976|Bacteroidetes,47M7C@768503|Cytophagia	976|Bacteroidetes	H	Molybdenum cofactor biosynthesis protein	moaC	-	4.6.1.17	ko:K03637	ko00790,ko01100,ko04122,map00790,map01100,map04122	-	R11372	RC03425	ko00000,ko00001,ko01000	-	-	-	MoCF_biosynth,MoaC
BYD3_k127_8260999_0	1122176.KB903542_gene418	4.28e-215	688.0	COG0793@1|root,COG0793@2|Bacteria,4NFK4@976|Bacteroidetes,1IP25@117747|Sphingobacteriia	976|Bacteroidetes	M	Belongs to the peptidase S41A family	-	-	3.4.21.102	ko:K03797	-	-	-	-	ko00000,ko01000,ko01002	-	-	-	DUF3340,PDZ,Peptidase_S41
BYD3_k127_8260999_2	1313421.JHBV01000030_gene2026	7.715e-23	102.0	COG2010@1|root,COG2010@2|Bacteria	2|Bacteria	C	Cytochrome c	-	-	-	-	-	-	-	-	-	-	-	-	PSCyt1
BYD3_k127_8260999_1	760192.Halhy_0700	2.764e-124	409.0	COG1680@1|root,COG1680@2|Bacteria,4NHVF@976|Bacteroidetes,1IS4W@117747|Sphingobacteriia	976|Bacteroidetes	V	COG1680 Beta-lactamase class C and other penicillin binding	-	-	-	-	-	-	-	-	-	-	-	-	Beta-lactamase,DUF3471,TPR_2
BYD3_k127_8265867_1	1268240.ATFI01000002_gene4839	7.14e-107	364.0	COG0497@1|root,COG0497@2|Bacteria,4NE3I@976|Bacteroidetes,2FMIG@200643|Bacteroidia,4ANPU@815|Bacteroidaceae	976|Bacteroidetes	L	May be involved in recombinational repair of damaged DNA	recN	-	-	ko:K03631	-	-	-	-	ko00000,ko03400	-	-	-	SMC_N
BYD3_k127_8265867_3	153721.MYP_2527	7.588e-82	296.0	COG0457@1|root,COG0457@2|Bacteria,4NJEF@976|Bacteroidetes,47Q7U@768503|Cytophagia	976|Bacteroidetes	S	Tetratricopeptide repeat	-	-	-	-	-	-	-	-	-	-	-	-	PMT_2,TPR_1,TPR_16,TPR_2,TPR_8
BYD3_k127_8265867_2	1122176.KB903535_gene1981	1.499e-98	332.0	COG1044@1|root,COG1044@2|Bacteria,4NE5G@976|Bacteroidetes,1IWT1@117747|Sphingobacteriia	976|Bacteroidetes	M	UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD	lpxD	-	2.3.1.191	ko:K02536	ko00540,ko01100,map00540,map01100	M00060	R04550	RC00039,RC00166	ko00000,ko00001,ko00002,ko01000,ko01005	-	-	-	Hexapep,Hexapep_2,LpxD
BYD3_k127_8265867_0	760192.Halhy_4709	1.154e-160	512.0	COG0764@1|root,COG0774@1|root,COG0764@2|Bacteria,COG0774@2|Bacteria,4NEJ3@976|Bacteroidetes,1IQB1@117747|Sphingobacteriia	976|Bacteroidetes	IM	Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis	fabZ	-	3.5.1.108,4.2.1.59	ko:K16363	ko00061,ko00540,ko01100,ko01212,map00061,map00540,map01100,map01212	M00060,M00083	R04428,R04535,R04537,R04544,R04568,R04587,R04954,R04965	RC00166,RC00300,RC00831,RC01095	ko00000,ko00001,ko00002,ko01000,ko01004,ko01005	-	-	-	FabA,LpxC
BYD3_k127_8314307_0	1408813.AYMG01000001_gene3727	3.687e-49	201.0	COG5000@1|root,COG5000@2|Bacteria,4NE49@976|Bacteroidetes,1INZH@117747|Sphingobacteriia	976|Bacteroidetes	T	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase	zraS_1	-	-	-	-	-	-	-	-	-	-	-	HATPase_c,HisKA
BYD3_k127_8337945_2	760192.Halhy_3329	3.332e-74	252.0	COG0532@1|root,COG0532@2|Bacteria,4NGP3@976|Bacteroidetes,1IQ0V@117747|Sphingobacteriia	976|Bacteroidetes	J	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex	infB	-	-	ko:K02519	-	-	-	-	ko00000,ko03012,ko03029	-	-	-	GTP_EFTU,GTP_EFTU_D2,IF-2,IF2_N
BYD3_k127_8337945_0	760192.Halhy_6040	8.753e-94	315.0	COG0177@1|root,COG0177@2|Bacteria,4NE7K@976|Bacteroidetes,1IPPM@117747|Sphingobacteriia	976|Bacteroidetes	L	Protein of unknown function (DUF2400)	-	-	-	-	-	-	-	-	-	-	-	-	DUF2400
BYD3_k127_8337945_1	1122176.KB903540_gene47	1.085e-75	261.0	COG0035@1|root,COG0035@2|Bacteria,4NFZM@976|Bacteroidetes,1IR1N@117747|Sphingobacteriia	976|Bacteroidetes	F	uracil phosphoribosyltransferase	upp	-	2.4.2.9	ko:K00761	ko00240,ko01100,map00240,map01100	-	R00966	RC00063	ko00000,ko00001,ko01000	-	-	-	UPRTase
BYD3_k127_8337945_3	1122176.KB903540_gene52	1.204e-61	224.0	28MPU@1|root,2ZAYW@2|Bacteria,4NXA9@976|Bacteroidetes,1IYAK@117747|Sphingobacteriia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_8339414_2	926549.KI421517_gene3844	2.463e-29	127.0	COG2911@1|root,COG2911@2|Bacteria,4NF7F@976|Bacteroidetes,47KQP@768503|Cytophagia	976|Bacteroidetes	S	PFAM Family of	-	-	-	-	-	-	-	-	-	-	-	-	TamB
BYD3_k127_8339414_4	880526.KE386488_gene179	5.491e-05	55.0	COG2911@1|root,COG2911@2|Bacteria,4NF7F@976|Bacteroidetes,2FNBJ@200643|Bacteroidia,22UXT@171550|Rikenellaceae	976|Bacteroidetes	S	TamB, inner membrane protein subunit of TAM complex	-	-	-	-	-	-	-	-	-	-	-	-	TamB
BYD3_k127_8339414_1	391603.FBALC1_04087	1.643e-85	291.0	COG0294@1|root,COG0294@2|Bacteria,4NEYJ@976|Bacteroidetes,1HXJ4@117743|Flavobacteriia	976|Bacteroidetes	H	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives	folP	-	2.5.1.15	ko:K00796	ko00790,ko01100,map00790,map01100	M00126,M00841	R03066,R03067	RC00121,RC00842	ko00000,ko00001,ko00002,ko01000	-	-	-	Pterin_bind
BYD3_k127_8339414_0	760192.Halhy_1084	5.538e-102	346.0	COG0739@1|root,COG0739@2|Bacteria,4NECF@976|Bacteroidetes,1IRH5@117747|Sphingobacteriia	976|Bacteroidetes	M	Peptidase family M23	-	-	-	-	-	-	-	-	-	-	-	-	Peptidase_M23
BYD3_k127_8339414_3	760192.Halhy_0096	4.965e-24	101.0	COG5002@1|root,COG5002@2|Bacteria,4NETP@976|Bacteroidetes,1IQ3E@117747|Sphingobacteriia	976|Bacteroidetes	T	Histidine kinase	phoR	-	2.7.13.3	ko:K07636	ko02020,map02020	M00434	-	-	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	-	-	-	HATPase_c,HisKA
BYD3_k127_8343036_0	1122179.KB890413_gene4885	5.961e-155	504.0	COG0591@1|root,COG0591@2|Bacteria,4NEF3@976|Bacteroidetes,1IQ8J@117747|Sphingobacteriia	976|Bacteroidetes	E	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family	-	-	-	-	-	-	-	-	-	-	-	-	SSF
BYD3_k127_8343036_1	1122176.KB903548_gene1185	1.902e-60	218.0	COG0730@1|root,COG0730@2|Bacteria,4NKPI@976|Bacteroidetes	976|Bacteroidetes	S	membrane transporter protein	-	-	-	ko:K07090	-	-	-	-	ko00000	-	-	-	TauE
BYD3_k127_8343036_2	1123277.KB893243_gene341	1.252e-53	192.0	COG0346@1|root,COG0346@2|Bacteria,4NNGG@976|Bacteroidetes,47PQ6@768503|Cytophagia	976|Bacteroidetes	E	PFAM Glyoxalase bleomycin resistance protein dioxygenase	mce	-	5.1.99.1	ko:K05606	ko00280,ko00630,ko00640,ko00720,ko01100,ko01120,ko01200,map00280,map00630,map00640,map00720,map01100,map01120,map01200	M00373,M00375,M00376,M00741	R02765,R09979	RC00780,RC02739	ko00000,ko00001,ko00002,ko01000	-	-	-	Glyoxalase_4
BYD3_k127_8369678_2	1233951.IO90_09725	8.879e-05	48.0	2E78C@1|root,331S1@2|Bacteria,4NPWT@976|Bacteroidetes,1I2MW@117743|Flavobacteriia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_8369678_1	1121904.ARBP01000001_gene5750	4.992e-48	192.0	COG4675@1|root,COG4675@2|Bacteria	2|Bacteria	M	tail collar domain protein	-	-	-	-	-	-	-	-	-	-	-	-	Collar,Phage_fiber_2
BYD3_k127_8369678_0	1122176.KB903561_gene3593	6.263e-112	366.0	COG3637@1|root,COG3637@2|Bacteria,4NE33@976|Bacteroidetes,1IXJN@117747|Sphingobacteriia	976|Bacteroidetes	M	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_837682_9	1197477.IA57_04065	3.628e-33	133.0	2DXHD@1|root,3451M@2|Bacteria,4P5F3@976|Bacteroidetes,1IA92@117743|Flavobacteriia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_837682_10	485913.Krac_9732	5.478e-30	130.0	COG1506@1|root,COG1506@2|Bacteria	2|Bacteria	E	serine-type peptidase activity	-	-	-	-	-	-	-	-	-	-	-	-	AXE1,DLH,Peptidase_S9
BYD3_k127_837682_0	391603.FBALC1_09947	7.671e-148	476.0	COG2273@1|root,COG2273@2|Bacteria,4NHWA@976|Bacteroidetes,1HX44@117743|Flavobacteriia	976|Bacteroidetes	G	Beta-glucanase Beta-glucan synthetase	-	-	-	-	-	-	-	-	-	-	-	-	Glyco_hydro_16
BYD3_k127_837682_8	1313421.JHBV01000142_gene1116	1.028e-40	158.0	COG0664@1|root,COG0664@2|Bacteria,4NM4K@976|Bacteroidetes,1IXIH@117747|Sphingobacteriia	976|Bacteroidetes	T	Cyclic nucleotide-monophosphate binding domain	-	-	-	-	-	-	-	-	-	-	-	-	Crp,cNMP_binding
BYD3_k127_837682_4	1408473.JHXO01000012_gene293	7.314e-74	252.0	COG2353@1|root,COG2353@2|Bacteria,4NNMD@976|Bacteroidetes,2FVBK@200643|Bacteroidia	976|Bacteroidetes	S	YceI-like domain	-	-	-	-	-	-	-	-	-	-	-	-	YceI
BYD3_k127_837682_2	1279009.ADICEAN_03444	1.828e-116	379.0	COG1028@1|root,COG1028@2|Bacteria,4NGQY@976|Bacteroidetes,47JWP@768503|Cytophagia	976|Bacteroidetes	IQ	KR domain	-	-	1.1.1.53	ko:K00038	ko00140,ko01100,map00140,map01100	-	R04831,R04834,R04844,R04847	RC00139,RC01219,RC01220	ko00000,ko00001,ko01000	-	-	-	adh_short_C2
BYD3_k127_837682_6	925409.KI911562_gene2548	2.28e-69	240.0	COG3631@1|root,COG3631@2|Bacteria,4NP0M@976|Bacteroidetes,1IY2J@117747|Sphingobacteriia	976|Bacteroidetes	S	SnoaL-like polyketide cyclase	-	-	-	-	-	-	-	-	-	-	-	-	SnoaL
BYD3_k127_837682_12	991.IW20_23155	7.287e-29	118.0	2E3H7@1|root,32YFW@2|Bacteria,4NVEF@976|Bacteroidetes,1I52A@117743|Flavobacteriia,2NXWF@237|Flavobacterium	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_837682_1	1296415.JACC01000059_gene1021	1.932e-119	396.0	COG3509@1|root,COG3509@2|Bacteria,4NHFS@976|Bacteroidetes,1I3VW@117743|Flavobacteriia	976|Bacteroidetes	Q	Esterase PHB depolymerase	-	-	-	ko:K03932	-	-	-	-	ko00000	-	CE1	-	Abhydrolase_2,Esterase,Esterase_phd
BYD3_k127_837682_5	1298867.AUES01000002_gene1471	8.244e-70	244.0	COG2114@1|root,COG2114@2|Bacteria,1R4VB@1224|Proteobacteria,2TRX8@28211|Alphaproteobacteria,3JWND@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	T	Adenylyl- / guanylyl cyclase, catalytic domain	-	-	4.6.1.1	ko:K01768	ko00230,ko02025,ko04113,ko04213,map00230,map02025,map04113,map04213	M00695	R00089,R00434	RC00295	ko00000,ko00001,ko00002,ko01000	-	-	-	Guanylate_cyc
BYD3_k127_837682_3	760192.Halhy_5493	3.004e-87	290.0	2F17F@1|root,33U8J@2|Bacteria,4P2WT@976|Bacteroidetes	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_837682_11	1279009.ADICEAN_02930	2.211e-29	128.0	COG0662@1|root,COG0662@2|Bacteria,4NSGT@976|Bacteroidetes,47RN2@768503|Cytophagia	976|Bacteroidetes	G	Cupin domain	-	-	-	-	-	-	-	-	-	-	-	-	Cupin_2
BYD3_k127_837682_7	1237149.C900_01179	5.678e-61	213.0	COG4898@1|root,COG4898@2|Bacteria,4NQGY@976|Bacteroidetes,47RED@768503|Cytophagia	976|Bacteroidetes	S	Domain of unknown function (DU1801)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1801
BYD3_k127_8381853_0	1121104.AQXH01000001_gene891	4.863e-195	614.0	COG0525@1|root,COG0525@2|Bacteria,4NETB@976|Bacteroidetes,1IPEY@117747|Sphingobacteriia	976|Bacteroidetes	J	amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner	valS	GO:0003674,GO:0003824,GO:0004812,GO:0004832,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006438,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576	6.1.1.9	ko:K01873	ko00970,map00970	M00359,M00360	R03665	RC00055,RC00523	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	-	-	-	Anticodon_1,Val_tRNA-synt_C,tRNA-synt_1
BYD3_k127_8381853_4	1121887.AUDK01000001_gene503	5.321e-56	211.0	COG3146@1|root,COG3146@2|Bacteria,4NI7H@976|Bacteroidetes,1I0KW@117743|Flavobacteriia,2NUDN@237|Flavobacterium	976|Bacteroidetes	S	8-amino-7-oxononanoate synthase	-	-	-	-	-	-	-	-	-	-	-	-	Acetyltransf_6,FemAB_like
BYD3_k127_8381853_1	1317122.ATO12_16485	2.177e-121	394.0	COG1116@1|root,COG1116@2|Bacteria,4PKJ3@976|Bacteroidetes,1HZNX@117743|Flavobacteriia,2YKDU@290174|Aquimarina	976|Bacteroidetes	P	ATPases associated with a variety of cellular activities	-	-	-	ko:K02049	-	M00188	-	-	ko00000,ko00002,ko02000	3.A.1.16,3.A.1.17	-	-	ABC_tran
BYD3_k127_8381853_3	1313421.JHBV01000030_gene2312	1.057e-67	243.0	COG0600@1|root,COG0600@2|Bacteria,4NPPC@976|Bacteroidetes,1IXWZ@117747|Sphingobacteriia	976|Bacteroidetes	P	Binding-protein-dependent transport system inner membrane component	-	-	-	ko:K02050,ko:K15577	ko00910,ko02010,map00910,map02010	M00188,M00438	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.16,3.A.1.16.1,3.A.1.16.2,3.A.1.17	-	-	BPD_transp_1
BYD3_k127_8381853_2	1317122.ATO12_16475	2.969e-105	352.0	COG0715@1|root,COG2885@1|root,COG0715@2|Bacteria,COG2885@2|Bacteria,4NM1E@976|Bacteroidetes,1IAUW@117743|Flavobacteriia,2YK6M@290174|Aquimarina	976|Bacteroidetes	MP	NMT1-like family	-	-	-	ko:K02051	-	M00188	-	-	ko00000,ko00002,ko02000	3.A.1.16,3.A.1.17	-	-	NMT1,NMT1_2,OmpA
BYD3_k127_8384405_0	1122176.KB903548_gene1169	1.417e-311	962.0	COG0441@1|root,COG0441@2|Bacteria,4NEFT@976|Bacteroidetes,1IPWX@117747|Sphingobacteriia	976|Bacteroidetes	J	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)	thrS	GO:0003674,GO:0003824,GO:0004812,GO:0004829,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006435,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576	6.1.1.3	ko:K01868	ko00970,map00970	M00359,M00360	R03663	RC00055,RC00523	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	-	-	-	HGTP_anticodon,TGS,tRNA-synt_2b,tRNA_SAD
BYD3_k127_8384405_1	1313421.JHBV01000140_gene1332	5.903e-22	106.0	COG1361@1|root,COG3386@1|root,COG5306@1|root,COG1361@2|Bacteria,COG3386@2|Bacteria,COG5306@2|Bacteria	2|Bacteria	G	gluconolactonase activity	-	-	3.2.1.4,3.2.1.78	ko:K01179,ko:K01218,ko:K12287	ko00051,ko00500,ko01100,ko02024,map00051,map00500,map01100,map02024	-	R01332,R06200,R11307,R11308	RC00467	ko00000,ko00001,ko01000,ko02044	-	GH26,GH5,GH9	-	CBM_3,CBM_35,CBM_X2,CHU_C,DUF11,Esterase,Glyco_hydro_26,Laminin_G_3,PKD,SBBP,SdrD_B
BYD3_k127_839269_1	746697.Aeqsu_1954	2.116e-58	230.0	COG4886@1|root,COG4886@2|Bacteria,4NFXV@976|Bacteroidetes,1I00F@117743|Flavobacteriia	976|Bacteroidetes	O	Tetratricopeptide repeat	-	-	-	-	-	-	-	-	-	-	-	-	Recep_L_domain
BYD3_k127_839269_0	313606.M23134_05335	1.385e-80	284.0	COG1372@1|root,COG4447@1|root,COG5184@1|root,COG5492@1|root,COG1372@2|Bacteria,COG4447@2|Bacteria,COG5184@2|Bacteria,COG5492@2|Bacteria,4NEZQ@976|Bacteroidetes,47PGJ@768503|Cytophagia	976|Bacteroidetes	G	Participates in initiation and elongation during chromosome replication	-	-	-	-	-	-	-	-	-	-	-	-	PKD,Sortilin-Vps10
BYD3_k127_8396501_3	1122605.KB893644_gene1349	3.611e-55	198.0	COG4758@1|root,COG4758@2|Bacteria,4NQRE@976|Bacteroidetes,1ITT6@117747|Sphingobacteriia	976|Bacteroidetes	S	membrane protein (DUF2154)	-	-	-	-	-	-	-	-	-	-	-	-	DUF2154
BYD3_k127_8396501_4	700598.Niako_7015	2.834e-37	143.0	2EC7G@1|root,33661@2|Bacteria,4NWXP@976|Bacteroidetes,1IU01@117747|Sphingobacteriia	976|Bacteroidetes	S	Domain of unknown function (DUF4288)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4288
BYD3_k127_8396501_1	1122605.KB893644_gene1350	6.825e-119	391.0	COG2972@1|root,COG2972@2|Bacteria,4NHG3@976|Bacteroidetes,1INSV@117747|Sphingobacteriia	976|Bacteroidetes	T	Histidine kinase	-	-	-	-	-	-	-	-	-	-	-	-	HATPase_c_5,His_kinase
BYD3_k127_8396501_2	929713.NIASO_12840	4.055e-114	372.0	COG3279@1|root,COG3279@2|Bacteria,4NEAH@976|Bacteroidetes,1IQME@117747|Sphingobacteriia	976|Bacteroidetes	K	response regulator, receiver	-	-	-	ko:K02477	-	-	-	-	ko00000,ko02022	-	-	-	LytTR,Response_reg
BYD3_k127_8396501_0	925409.KI911562_gene2741	9.506e-143	456.0	COG1284@1|root,COG1418@1|root,COG1284@2|Bacteria,COG1418@2|Bacteria,4NG9F@976|Bacteroidetes,1IPVB@117747|Sphingobacteriia	976|Bacteroidetes	S	protein conserved in bacteria (DUF2179)	-	-	-	-	-	-	-	-	-	-	-	-	DUF2179,HD,YitT_membrane
BYD3_k127_8398617_3	1123508.JH636439_gene994	0.0002964	44.0	COG2608@1|root,COG2608@2|Bacteria,2J37Z@203682|Planctomycetes	203682|Planctomycetes	P	mercury ion transmembrane transporter activity	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_8398617_0	471854.Dfer_3113	1.278e-155	503.0	COG3667@1|root,COG3667@2|Bacteria,4NICY@976|Bacteroidetes,47KK4@768503|Cytophagia	976|Bacteroidetes	P	copper resistance	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_8398617_2	164757.Mjls_1521	7.104e-29	122.0	297W1@1|root,2ZV2M@2|Bacteria,2II0V@201174|Actinobacteria,23DES@1762|Mycobacteriaceae	201174|Actinobacteria	S	Domain of unknown function (DUF4396)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4396
BYD3_k127_8398617_1	700598.Niako_0789	7.682e-56	199.0	COG3488@1|root,COG3488@2|Bacteria,4NGBS@976|Bacteroidetes,1IWE8@117747|Sphingobacteriia	976|Bacteroidetes	C	Di-haem oxidoreductase, putative peroxidase	-	-	-	-	-	-	-	-	-	-	-	-	DHOR
BYD3_k127_839911_0	1047013.AQSP01000070_gene34	3.054e-186	608.0	COG3292@1|root,COG3920@1|root,COG3292@2|Bacteria,COG3920@2|Bacteria,2NNZT@2323|unclassified Bacteria	2|Bacteria	T	Two component regulator propeller	pdtaS	-	2.7.13.3	ko:K00936	-	M00839	-	-	ko00000,ko00002,ko01000,ko01001,ko02022	-	-	-	HATPase_c,HATPase_c_2,H_kinase_N,HisKA_2,Reg_prop,Y_Y_Y
BYD3_k127_839911_1	1267211.KI669560_gene2426	2.91e-153	491.0	COG3746@1|root,COG3746@2|Bacteria,4NG5Z@976|Bacteroidetes,1INUQ@117747|Sphingobacteriia	976|Bacteroidetes	P	Phosphate-selective porin O and P	-	-	-	-	-	-	-	-	-	-	-	-	Porin_O_P
BYD3_k127_8419348_1	1313421.JHBV01000138_gene1206	9.399e-30	136.0	COG5295@1|root,COG5295@2|Bacteria,4NF3S@976|Bacteroidetes,1ISQ8@117747|Sphingobacteriia	976|Bacteroidetes	UW	domain, Protein	-	-	-	-	-	-	-	-	-	-	-	-	Collagen,Peptidase_S74
BYD3_k127_8419348_2	938709.AUSH02000051_gene233	2.03e-11	77.0	COG3210@1|root,COG3210@2|Bacteria,4PPCP@976|Bacteroidetes	976|Bacteroidetes	U	Chaperone of endosialidase	-	-	-	-	-	-	-	-	-	-	-	-	Peptidase_S74
BYD3_k127_8419348_4	1120951.AUBG01000019_gene1692	0.0002641	50.0	COG2358@1|root,COG2706@1|root,COG2358@2|Bacteria,COG2706@2|Bacteria,4PP03@976|Bacteroidetes,1I8YI@117743|Flavobacteriia	976|Bacteroidetes	EG	Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella	-	-	-	-	-	-	-	-	-	-	-	-	VCBS
BYD3_k127_8419348_0	1313421.JHBV01000043_gene3107	2.643e-60	237.0	COG1520@1|root,COG2931@1|root,COG3291@1|root,COG4935@1|root,COG1520@2|Bacteria,COG2931@2|Bacteria,COG3291@2|Bacteria,COG4935@2|Bacteria,4PI1E@976|Bacteroidetes,1IYUU@117747|Sphingobacteriia	976|Bacteroidetes	Q	Immunoglobulin	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_8419348_5	1123234.AUKI01000014_gene2347	0.0005841	53.0	COG1345@1|root,COG1345@2|Bacteria,4NHMH@976|Bacteroidetes,1HZTE@117743|Flavobacteriia	976|Bacteroidetes	N	Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end	-	-	-	-	-	-	-	-	-	-	-	-	Big_2,DUF3494,HYR,Laminin_G_3
BYD3_k127_8434224_2	1237149.C900_04382	3.083e-16	81.0	COG1983@1|root,COG1983@2|Bacteria,4NUNU@976|Bacteroidetes,47RWN@768503|Cytophagia	976|Bacteroidetes	KT	PFAM PspC domain	-	-	-	-	-	-	-	-	-	-	-	-	PspC
BYD3_k127_8434224_0	1089547.KB913013_gene3986	1.743e-186	597.0	COG1001@1|root,COG1001@2|Bacteria,4NFD9@976|Bacteroidetes,47KX0@768503|Cytophagia	976|Bacteroidetes	F	Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family	ade	-	3.5.4.2	ko:K01486	ko00230,ko01100,map00230,map01100	-	R01244	RC00477	ko00000,ko00001,ko01000	-	-	-	Adenine_deam_C,Amidohydro_1
BYD3_k127_8434224_1	1120951.AUBG01000006_gene527	2.716e-63	227.0	2C3TU@1|root,2ZBKB@2|Bacteria,4NMMF@976|Bacteroidetes,1I1HI@117743|Flavobacteriia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_846683_6	1122176.KB903536_gene1829	1.065e-19	106.0	COG3291@1|root,COG4932@1|root,COG3291@2|Bacteria,COG4932@2|Bacteria	2|Bacteria	M	domain protein	-	-	1.1.3.9,3.2.1.4	ko:K01179,ko:K01997,ko:K04618	ko00052,ko00500,ko01100,ko02010,ko02024,map00052,map00500,map01100,map02010,map02024	M00237	R01098,R06200,R11307,R11308	RC00194	ko00000,ko00001,ko00002,ko01000,ko02000	3.A.1.4	GH5,GH9	-	CHU_C,DUF1929,F5_F8_type_C,Glyco_hydro_64,PKD,SprB
BYD3_k127_846683_5	926562.Oweho_2795	1.678e-32	148.0	COG1572@1|root,COG1572@2|Bacteria	2|Bacteria	NU	bacterial-type flagellum-dependent cell motility	-	-	-	-	-	-	-	-	-	-	-	-	BNR_assoc_N,Beta_helix,CARDB,Calx-beta,Cleaved_Adhesin,DUF4465,Glyco_tran_WbsX,fn3
BYD3_k127_846683_7	1313421.JHBV01000165_gene385	7.757e-06	60.0	COG2931@1|root,COG3291@1|root,COG2931@2|Bacteria,COG3291@2|Bacteria	2|Bacteria	S	metallopeptidase activity	-	-	-	-	-	-	-	-	-	-	-	-	CHU_C,Hint_2,PKD,SprB
BYD3_k127_846683_4	1122176.KB903543_gene550	1.971e-58	233.0	COG3291@1|root,COG3291@2|Bacteria,4NQ3X@976|Bacteroidetes,1IXCU@117747|Sphingobacteriia	976|Bacteroidetes	M	Legume lectin domain	-	-	-	-	-	-	-	-	-	-	-	-	CHU_C,Lectin_legB,PKD
BYD3_k127_846683_0	1122179.KB890425_gene3419	7.894e-315	975.0	COG0187@1|root,COG0187@2|Bacteria,4NE0P@976|Bacteroidetes,1IP1Y@117747|Sphingobacteriia	976|Bacteroidetes	L	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner	gyrB	-	5.99.1.3	ko:K02470	-	-	-	-	ko00000,ko01000,ko03032,ko03400	-	-	-	DNA_gyraseB,DNA_gyraseB_C,HATPase_c,Toprim
BYD3_k127_846683_1	1122176.KB903559_gene4117	1.642e-301	960.0	COG1572@1|root,COG4675@1|root,COG4935@1|root,COG1572@2|Bacteria,COG4675@2|Bacteria,COG4935@2|Bacteria,4NGW4@976|Bacteroidetes,1J10S@117747|Sphingobacteriia	976|Bacteroidetes	O	Peptide-N-glycosidase F, C terminal	-	-	-	-	-	-	-	-	-	-	-	-	Laminin_G_3,N-glycanase_C
BYD3_k127_846683_3	985255.APHJ01000018_gene3031	1.226e-58	211.0	COG4704@1|root,COG4704@2|Bacteria,4NUMP@976|Bacteroidetes,1I5WC@117743|Flavobacteriia	976|Bacteroidetes	S	Fibrobacter succinogenes major domain (Fib_succ_major)	-	-	-	-	-	-	-	-	-	-	-	-	BACON,Fib_succ_major
BYD3_k127_846683_2	1313421.JHBV01000027_gene1787	3.35e-81	283.0	COG1197@1|root,COG1197@2|Bacteria,4NEPA@976|Bacteroidetes,1IPC5@117747|Sphingobacteriia	976|Bacteroidetes	L	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site	mfd	-	-	ko:K03723	ko03420,map03420	-	-	-	ko00000,ko00001,ko01000,ko03400	-	-	-	CarD_CdnL_TRCF,DEAD,Helicase_C,TRCF
BYD3_k127_8490262_6	1313421.JHBV01000031_gene1514	6.139e-39	151.0	COG0768@1|root,COG0768@2|Bacteria,4NE47@976|Bacteroidetes,1IQ2C@117747|Sphingobacteriia	976|Bacteroidetes	M	Penicillin-binding protein 2	mrdA	-	3.4.16.4	ko:K05515	ko00550,ko01501,map00550,map01501	-	-	-	ko00000,ko00001,ko01000,ko01011	-	-	-	PBP_dimer,Transpeptidase
BYD3_k127_8490262_8	880071.Fleli_1383	1.346e-14	80.0	2AFDM@1|root,315DF@2|Bacteria,4NQ5K@976|Bacteroidetes,47R21@768503|Cytophagia	976|Bacteroidetes	S	rod shape-determining protein MreD	mreD	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_8490262_5	1408473.JHXO01000011_gene2963	4.692e-54	199.0	COG1792@1|root,COG1792@2|Bacteria,4NF14@976|Bacteroidetes,2FMWS@200643|Bacteroidia	976|Bacteroidetes	M	shape-determining protein MreC	mreC	-	-	ko:K03570	-	-	-	-	ko00000,ko03036	9.B.157.1	-	-	MreC
BYD3_k127_8490262_0	1122176.KB903550_gene4338	3.434e-176	557.0	COG1077@1|root,COG1077@2|Bacteria,4NETQ@976|Bacteroidetes,1IPMZ@117747|Sphingobacteriia	976|Bacteroidetes	D	Cell shape determining protein MreB Mrl	mreB	-	-	ko:K03569	-	-	-	-	ko00000,ko02048,ko03036,ko04812	1.A.33.1,9.B.157.1	-	-	MreB_Mbl
BYD3_k127_8490262_4	760192.Halhy_3558	5.613e-81	285.0	COG0612@1|root,COG0612@2|Bacteria,4NEPT@976|Bacteroidetes,1IQAH@117747|Sphingobacteriia	976|Bacteroidetes	S	Peptidase M16	-	-	-	-	-	-	-	-	-	-	-	-	Peptidase_M16,Peptidase_M16_C
BYD3_k127_8490262_1	1122176.KB903550_gene4340	5.568e-115	381.0	COG0592@1|root,COG0592@2|Bacteria,4NESB@976|Bacteroidetes,1IP8C@117747|Sphingobacteriia	976|Bacteroidetes	L	Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria	dnaN	-	2.7.7.7	ko:K02338	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	M00260	R00375,R00376,R00377,R00378	RC02795	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	-	-	-	DNA_pol3_beta,DNA_pol3_beta_2,DNA_pol3_beta_3
BYD3_k127_8490262_7	1121904.ARBP01000001_gene5638	2.232e-33	135.0	2AB14@1|root,339IP@2|Bacteria,4NZD5@976|Bacteroidetes	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_8490262_3	1121875.KB907550_gene717	4.662e-90	319.0	COG0457@1|root,COG2114@1|root,COG0457@2|Bacteria,COG2114@2|Bacteria,4NEVN@976|Bacteroidetes,1HYQY@117743|Flavobacteriia	976|Bacteroidetes	T	Belongs to the adenylyl cyclase class-4 guanylyl cyclase family	-	-	4.6.1.1	ko:K01768	ko00230,ko02025,ko04113,ko04213,map00230,map02025,map04113,map04213	M00695	R00089,R00434	RC00295	ko00000,ko00001,ko00002,ko01000	-	-	-	Guanylate_cyc,TPR_12,TPR_8
BYD3_k127_8490262_2	760192.Halhy_4940	4.55e-108	366.0	COG0745@1|root,COG2207@1|root,COG3292@1|root,COG5002@1|root,COG0745@2|Bacteria,COG2207@2|Bacteria,COG3292@2|Bacteria,COG5002@2|Bacteria,4P0IA@976|Bacteroidetes	976|Bacteroidetes	T	histidine kinase-, DNA gyrase B	-	-	-	-	-	-	-	-	-	-	-	-	HATPase_c,HTH_18,HisKA,Reg_prop,Response_reg,Y_Y_Y
BYD3_k127_850013_2	760192.Halhy_2800	8.153e-63	226.0	COG3735@1|root,COG3735@2|Bacteria,4NN4U@976|Bacteroidetes,1ITG6@117747|Sphingobacteriia	976|Bacteroidetes	S	TraB family	-	-	-	ko:K09973	-	-	-	-	ko00000	-	-	-	TraB
BYD3_k127_850013_1	761193.Runsl_1513	5.46e-68	239.0	COG0566@1|root,COG0566@2|Bacteria,4NF6H@976|Bacteroidetes,47JZC@768503|Cytophagia	976|Bacteroidetes	J	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family	trmH	-	2.1.1.185	ko:K03218,ko:K03437	-	-	-	-	ko00000,ko01000,ko03009,ko03016	-	-	-	SpoU_methylase,SpoU_sub_bind
BYD3_k127_850013_0	760192.Halhy_1860	2.421e-178	588.0	COG4412@1|root,COG4412@2|Bacteria,4PM4A@976|Bacteroidetes,1IWTI@117747|Sphingobacteriia	976|Bacteroidetes	UW	Fungalysin metallopeptidase (M36)	-	-	-	-	-	-	-	-	-	-	-	-	DUF11,FTP,PA,Peptidase_M36,Peptidase_M6
BYD3_k127_8520398_4	1122176.KB903539_gene1331	1.018e-64	236.0	COG1173@1|root,COG1173@2|Bacteria,4NGTQ@976|Bacteroidetes,1IQI5@117747|Sphingobacteriia	976|Bacteroidetes	EP	PFAM Binding-protein-dependent transport system inner membrane component	-	-	-	ko:K02034	ko02024,map02024	M00239	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.5	-	-	BPD_transp_1,OppC_N
BYD3_k127_8520398_2	1122176.KB903539_gene1332	3.549e-84	296.0	COG0601@1|root,COG0601@2|Bacteria,4NGIJ@976|Bacteroidetes,1IRI6@117747|Sphingobacteriia	976|Bacteroidetes	P	COG0601 ABC-type dipeptide oligopeptide nickel transport systems, permease components	-	-	-	ko:K02033	ko02024,map02024	M00239	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.5	-	-	BPD_transp_1
BYD3_k127_8520398_1	1313421.JHBV01000030_gene2168	6.05e-115	391.0	COG0747@1|root,COG0747@2|Bacteria,4PP5D@976|Bacteroidetes,1J0ZS@117747|Sphingobacteriia	976|Bacteroidetes	E	Bacterial extracellular solute-binding proteins, family 5 Middle	-	-	-	ko:K02035	ko02024,map02024	M00239	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.5	-	-	SBP_bac_5
BYD3_k127_8520398_6	1121904.ARBP01000028_gene1645	1.523e-55	207.0	COG1090@1|root,COG1090@2|Bacteria,4NINM@976|Bacteroidetes,47KA1@768503|Cytophagia	976|Bacteroidetes	S	PFAM NAD dependent epimerase dehydratase family	-	-	-	ko:K07071	-	-	-	-	ko00000	-	-	-	DUF1731,Epimerase
BYD3_k127_8520398_3	1122176.KB903535_gene2017	9.011e-70	238.0	COG0647@1|root,COG0647@2|Bacteria,4NNYH@976|Bacteroidetes	976|Bacteroidetes	G	phosphoheptose isomerase	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_8520398_5	760192.Halhy_1882	3.342e-56	206.0	COG0739@1|root,COG0739@2|Bacteria,4NFZN@976|Bacteroidetes,1IT7G@117747|Sphingobacteriia	976|Bacteroidetes	M	peptidase M23	nlpD_1	-	-	-	-	-	-	-	-	-	-	-	Peptidase_M23
BYD3_k127_8520398_0	760192.Halhy_1883	6.07e-165	557.0	COG1729@1|root,COG3063@1|root,COG1729@2|Bacteria,COG3063@2|Bacteria,4PKGA@976|Bacteroidetes,1J0PF@117747|Sphingobacteriia	976|Bacteroidetes	NU	Tetratricopeptide repeat	-	-	-	-	-	-	-	-	-	-	-	-	TPR_16,TPR_6,TPR_8
BYD3_k127_8520398_7	1313301.AUGC01000012_gene1345	3.478e-18	86.0	COG4770@1|root,COG4770@2|Bacteria,4NQ86@976|Bacteroidetes	976|Bacteroidetes	I	Biotin carboxyl carrier protein	-	-	6.4.1.1	ko:K01960	ko00020,ko00620,ko00720,ko01100,ko01120,ko01200,ko01230,map00020,map00620,map00720,map01100,map01120,map01200,map01230	M00173,M00620	R00344	RC00040,RC00367	ko00000,ko00001,ko00002,ko01000	-	-	-	Biotin_lipoyl
BYD3_k127_8562908_0	991.IW20_17950	5.548e-83	284.0	COG3292@1|root,COG3292@2|Bacteria,4NI2T@976|Bacteroidetes,1I1KX@117743|Flavobacteriia,2NWM3@237|Flavobacterium	976|Bacteroidetes	T	Two component regulator propeller	-	-	-	-	-	-	-	-	-	-	-	-	Reg_prop,YceI
BYD3_k127_8562908_1	762903.Pedsa_0399	4.415e-62	219.0	COG3127@1|root,COG3127@2|Bacteria,4NN8S@976|Bacteroidetes,1IRV7@117747|Sphingobacteriia	976|Bacteroidetes	Q	membrane	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_8562908_2	1150600.ADIARSV_3178	4.924e-40	150.0	COG0640@1|root,COG0640@2|Bacteria,4NSAV@976|Bacteroidetes,1IT7Z@117747|Sphingobacteriia	976|Bacteroidetes	K	transcriptional regulator	-	-	-	-	-	-	-	-	-	-	-	-	HTH_34
BYD3_k127_8562908_3	1124780.ANNU01000008_gene2710	1.721e-35	138.0	COG3250@1|root,COG3250@2|Bacteria,4NX3B@976|Bacteroidetes,47RUD@768503|Cytophagia	976|Bacteroidetes	G	beta-galactosidase activity	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_8562908_4	1123248.KB893319_gene4012	5.376e-25	107.0	2CJWK@1|root,32SAT@2|Bacteria,4NT72@976|Bacteroidetes,1IYMX@117747|Sphingobacteriia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_8562908_5	1123234.AUKI01000020_gene913	2.895e-06	52.0	290G7@1|root,2ZN59@2|Bacteria,4P86U@976|Bacteroidetes	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_8580745_0	1122176.KB903573_gene4825	8.029e-226	736.0	COG3227@1|root,COG3227@2|Bacteria,4NF8H@976|Bacteroidetes,1IXNJ@117747|Sphingobacteriia	976|Bacteroidetes	E	Thermolysin metallopeptidase, catalytic domain	npr	-	3.4.24.28	ko:K01400	-	-	-	-	ko00000,ko01000,ko01002	-	-	-	FTP,PepSY,Peptidase_M4,Peptidase_M4_C
BYD3_k127_8580745_2	1122176.KB903534_gene2218	3.655e-103	345.0	COG0859@1|root,COG0859@2|Bacteria,4NEPH@976|Bacteroidetes,1INZA@117747|Sphingobacteriia	976|Bacteroidetes	M	Glycosyl transferase, family 9	-	-	-	ko:K02843	ko00540,ko01100,map00540,map01100	M00080	-	-	ko00000,ko00001,ko00002,ko01000,ko01003,ko01005	-	GT9	-	Glyco_transf_9
BYD3_k127_8580745_1	760192.Halhy_1263	4.562e-201	639.0	COG1574@1|root,COG1574@2|Bacteria,4NFMV@976|Bacteroidetes,1IPIC@117747|Sphingobacteriia	976|Bacteroidetes	S	Amidohydrolase family	-	-	-	-	-	-	-	-	-	-	-	-	Amidohydro_3
BYD3_k127_858752_1	927658.AJUM01000024_gene2500	2.615e-142	463.0	COG4872@1|root,COG4872@2|Bacteria,4NIK7@976|Bacteroidetes	976|Bacteroidetes	S	Predicted membrane protein (DUF2157)	-	-	-	-	-	-	-	-	-	-	-	-	DUF2157
BYD3_k127_858752_2	927658.AJUM01000024_gene2501	3.664e-46	173.0	COG4929@1|root,COG4929@2|Bacteria,4NQB4@976|Bacteroidetes	976|Bacteroidetes	S	GDYXXLXY protein	-	-	-	-	-	-	-	-	-	-	-	-	GDYXXLXY
BYD3_k127_858752_3	1158294.JOMI01000002_gene3111	2.385e-15	83.0	2EDNQ@1|root,337IF@2|Bacteria,4NW0N@976|Bacteroidetes,2FZAD@200643|Bacteroidia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	YcxB
BYD3_k127_858752_0	1122621.ATZA01000083_gene2796	1.987e-222	698.0	COG0017@1|root,COG0017@2|Bacteria,4NDY4@976|Bacteroidetes,1IPJK@117747|Sphingobacteriia	976|Bacteroidetes	J	Asparaginyl-tRNA synthetase	asnS	-	6.1.1.22	ko:K01893	ko00970,map00970	M00359,M00360	R03648	RC00055,RC00523	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	-	-	-	tRNA-synt_2,tRNA_anti-codon
BYD3_k127_861967_0	1484460.JSWG01000001_gene2089	2.031e-48	194.0	COG0457@1|root,COG2114@1|root,COG0457@2|Bacteria,COG2114@2|Bacteria,4NKQV@976|Bacteroidetes,1HYSN@117743|Flavobacteriia	976|Bacteroidetes	T	Pfam Adenylate and Guanylate cyclase catalytic domain	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_8626228_2	509635.N824_23700	1.224e-46	175.0	COG1739@1|root,COG1739@2|Bacteria,4NF0D@976|Bacteroidetes,1IQV2@117747|Sphingobacteriia	976|Bacteroidetes	S	PFAM Uncharacterised protein family UPF0029, Impact, N-terminal	yigZ	-	-	-	-	-	-	-	-	-	-	-	UPF0029
BYD3_k127_8626228_1	1122176.KB903531_gene3025	4.83e-48	179.0	COG0237@1|root,COG0237@2|Bacteria,4NQKS@976|Bacteroidetes,1IS97@117747|Sphingobacteriia	976|Bacteroidetes	H	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A	coaE	GO:0003674,GO:0003824,GO:0004140,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006732,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0015936,GO:0015937,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0033865,GO:0033866,GO:0033875,GO:0034030,GO:0034032,GO:0034033,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046390,GO:0046483,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576	2.7.1.24	ko:K00859	ko00770,ko01100,map00770,map01100	M00120	R00130	RC00002,RC00078	ko00000,ko00001,ko00002,ko01000	-	-	-	CoaE
BYD3_k127_8626228_0	1279009.ADICEAN_03472	4.72e-104	342.0	COG4992@1|root,COG4992@2|Bacteria,4NE93@976|Bacteroidetes,47K80@768503|Cytophagia	976|Bacteroidetes	E	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family	rocD	-	2.6.1.13	ko:K00819	ko00330,ko01100,ko01110,ko01130,map00330,map01100,map01110,map01130	-	R00667	RC00006,RC00062	ko00000,ko00001,ko01000,ko01007	-	-	-	Aminotran_3
BYD3_k127_8631895_4	760192.Halhy_2724	2.743e-42	161.0	28HA8@1|root,2Z7MQ@2|Bacteria,4NEJD@976|Bacteroidetes,1IPUY@117747|Sphingobacteriia	976|Bacteroidetes	S	Domain of unknown function (DUF4835)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4835
BYD3_k127_8631895_1	760192.Halhy_2725	7.561e-145	469.0	COG0452@1|root,COG0452@2|Bacteria,4NE46@976|Bacteroidetes,1IPJR@117747|Sphingobacteriia	976|Bacteroidetes	H	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine	coaBC	-	4.1.1.36,6.3.2.5	ko:K13038	ko00770,ko01100,map00770,map01100	M00120	R03269,R04231	RC00064,RC00090,RC00822	ko00000,ko00001,ko00002,ko01000	-	-	-	DFP,Flavoprotein
BYD3_k127_8631895_5	760192.Halhy_2726	2.358e-31	126.0	2CT4B@1|root,32SSJ@2|Bacteria,4NQ76@976|Bacteroidetes,1ISVJ@117747|Sphingobacteriia	976|Bacteroidetes	K	RNA polymerase	rpoZ	-	-	-	-	-	-	-	-	-	-	-	RNA_pol_Rpb6
BYD3_k127_8631895_3	760192.Halhy_2727	5.643e-65	231.0	COG4105@1|root,COG4105@2|Bacteria,4NJ5A@976|Bacteroidetes,1IPXN@117747|Sphingobacteriia	976|Bacteroidetes	S	outer membrane assembly lipoprotein YfiO	yfiO	-	-	ko:K05807	-	-	-	-	ko00000,ko02000	1.B.33.1	-	-	YfiO
BYD3_k127_8631895_0	984262.SGRA_1055	2.553e-196	623.0	COG1541@1|root,COG1541@2|Bacteria,4PKJA@976|Bacteroidetes,1IP9C@117747|Sphingobacteriia	976|Bacteroidetes	H	GH3 auxin-responsive promoter	-	-	-	-	-	-	-	-	-	-	-	-	GH3
BYD3_k127_8631895_6	1392486.JIAF01000001_gene338	3.97e-08	63.0	COG2834@1|root,COG2834@2|Bacteria,4NFGN@976|Bacteroidetes,2FQ63@200643|Bacteroidia	976|Bacteroidetes	M	outer membrane lipoprotein carrier protein LolA	lolA	-	-	ko:K03634	-	-	-	-	ko00000	-	-	-	LolA,LolA_2
BYD3_k127_8631895_2	760192.Halhy_1857	9.947e-74	251.0	COG1674@1|root,COG1674@2|Bacteria,4NE86@976|Bacteroidetes,1INVI@117747|Sphingobacteriia	976|Bacteroidetes	D	DNA segregation ATPase FtsK SpoIIIE and related	ftsK	-	-	ko:K03466	-	-	-	-	ko00000,ko03036	3.A.12	-	-	FtsK_4TM,FtsK_SpoIIIE,Ftsk_gamma
BYD3_k127_863515_0	745718.JADT01000008_gene3179	1.113e-200	643.0	COG1520@1|root,COG1520@2|Bacteria,4NMP7@976|Bacteroidetes,1I1N3@117743|Flavobacteriia	976|Bacteroidetes	S	PQQ-like domain	-	-	-	-	-	-	-	-	-	-	-	-	PQQ_2
BYD3_k127_863515_1	641526.ADIWIN_3900	1.418e-119	400.0	COG0362@1|root,COG3265@1|root,COG0362@2|Bacteria,COG3265@2|Bacteria,4NG05@976|Bacteroidetes,1HXYX@117743|Flavobacteriia	976|Bacteroidetes	G	Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH	gnd	-	1.1.1.343,1.1.1.44	ko:K00033	ko00030,ko00480,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map00480,map01100,map01110,map01120,map01130,map01200	M00004,M00006	R01528,R10221	RC00001,RC00539	ko00000,ko00001,ko00002,ko01000	-	-	-	6PGD,NAD_binding_2,SKI
BYD3_k127_863515_2	762903.Pedsa_3675	1.67e-10	64.0	2BXI1@1|root,32R1C@2|Bacteria,4NR9I@976|Bacteroidetes,1ISYI@117747|Sphingobacteriia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_8637095_3	1408433.JHXV01000026_gene3034	1.497e-37	143.0	COG1695@1|root,COG1695@2|Bacteria,4NSI4@976|Bacteroidetes,1I2SA@117743|Flavobacteriia,2PAYF@246874|Cryomorphaceae	976|Bacteroidetes	K	Transcriptional regulator PadR-like family	-	-	-	ko:K10947	-	-	-	-	ko00000,ko03000	-	-	-	PadR
BYD3_k127_8637095_2	1122176.KB903556_gene4062	5.676e-51	190.0	COG1983@1|root,COG1983@2|Bacteria,4NG3T@976|Bacteroidetes,1IPE9@117747|Sphingobacteriia	976|Bacteroidetes	KT	PFAM PspC domain	-	-	-	ko:K03973	-	-	-	-	ko00000,ko02048,ko03000	-	-	-	DUF2807,PspC
BYD3_k127_8637095_0	760192.Halhy_3815	3.503e-267	831.0	COG4108@1|root,COG4108@2|Bacteria,4NFEZ@976|Bacteroidetes,1IP50@117747|Sphingobacteriia	976|Bacteroidetes	J	Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP	prfC	-	-	ko:K02837	-	-	-	-	ko00000,ko03012	-	-	-	GTP_EFTU,GTP_EFTU_D2,RF3_C
BYD3_k127_8637095_1	867902.Ornrh_1425	3.514e-99	330.0	COG4783@1|root,COG4783@2|Bacteria,4NEF9@976|Bacteroidetes,1HZ36@117743|Flavobacteriia	976|Bacteroidetes	S	Pfam Peptidase family M48	-	-	-	-	-	-	-	-	-	-	-	-	Peptidase_M48
BYD3_k127_864239_0	1121451.DESAM_20322	1.3e-70	266.0	COG0642@1|root,COG3292@1|root,COG2205@2|Bacteria,COG3292@2|Bacteria,1NRP8@1224|Proteobacteria,42PU4@68525|delta/epsilon subdivisions,2WMBQ@28221|Deltaproteobacteria,2M8GC@213115|Desulfovibrionales	28221|Deltaproteobacteria	T	Y_Y_Y domain	-	-	-	-	-	-	-	-	-	-	-	-	HATPase_c,HisKA,Reg_prop,Response_reg,Y_Y_Y
BYD3_k127_8651068_4	760192.Halhy_2125	2.905e-32	130.0	COG0730@1|root,COG0730@2|Bacteria,4PP1E@976|Bacteroidetes,1J0WY@117747|Sphingobacteriia	976|Bacteroidetes	S	Protein of unknown function (DUF2723)	-	-	-	-	-	-	-	-	-	-	-	-	DUF2723
BYD3_k127_8651068_3	1313421.JHBV01000042_gene3264	1.588e-57	203.0	COG0698@1|root,COG0698@2|Bacteria,4NNSU@976|Bacteroidetes,1IS85@117747|Sphingobacteriia	976|Bacteroidetes	G	Ribose 5-phosphate isomerase	rpiB	-	5.3.1.6	ko:K01808	ko00030,ko00051,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00051,map00710,map01100,map01110,map01120,map01130,map01200,map01230	M00004,M00007,M00165,M00167	R01056,R09030	RC00376,RC00434	ko00000,ko00001,ko00002,ko01000	-	-	-	LacAB_rpiB
BYD3_k127_8651068_1	1122179.KB890458_gene817	3.939e-158	514.0	COG2234@1|root,COG2234@2|Bacteria,4NFDJ@976|Bacteroidetes,1IQ2M@117747|Sphingobacteriia	976|Bacteroidetes	S	peptidase	-	-	-	-	-	-	-	-	-	-	-	-	PA,Peptidase_M28
BYD3_k127_8651068_0	1122179.KB890425_gene3353	1.667e-221	700.0	COG0029@1|root,COG0029@2|Bacteria,4NGUE@976|Bacteroidetes,1IQPX@117747|Sphingobacteriia	976|Bacteroidetes	H	Catalyzes the oxidation of L-aspartate to iminoaspartate	nadB	-	1.4.3.16	ko:K00278	ko00250,ko00760,ko01100,map00250,map00760,map01100	M00115	R00357,R00481	RC00006,RC02566	ko00000,ko00001,ko00002,ko01000	-	-	-	FAD_binding_2,Succ_DH_flav_C
BYD3_k127_8651068_2	269798.CHU_0928	3.2e-87	303.0	COG0438@1|root,COG0438@2|Bacteria,4NETA@976|Bacteroidetes,47KRN@768503|Cytophagia	976|Bacteroidetes	M	PFAM Glycosyl transferases group 1	-	-	-	-	-	-	-	-	-	-	-	-	Glyco_transf_4,Glycos_transf_1
BYD3_k127_8651068_5	688246.Premu_0532	3.534e-12	79.0	COG2259@1|root,COG2259@2|Bacteria,4NK73@976|Bacteroidetes,2G0RP@200643|Bacteroidia	976|Bacteroidetes	S	Doxx family	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_8651068_6	1217710.F969_03223	5.266e-09	68.0	COG2885@1|root,COG2885@2|Bacteria,1MWHF@1224|Proteobacteria,1S8KT@1236|Gammaproteobacteria,3NK8Q@468|Moraxellaceae	1236|Gammaproteobacteria	M	OmpA family	-	-	-	ko:K03286	-	-	-	-	ko00000,ko02000	1.B.6	-	-	OmpA
BYD3_k127_8665491_8	1122176.KB903544_gene803	1.809e-25	109.0	COG1828@1|root,COG1828@2|Bacteria,4NV1M@976|Bacteroidetes	976|Bacteroidetes	F	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL	purS	-	6.3.5.3	ko:K01952	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	M00048	R04463	RC00010,RC01160	ko00000,ko00001,ko00002,ko01000	-	-	-	PurS
BYD3_k127_8665491_4	760192.Halhy_2945	7.663e-86	290.0	COG0313@1|root,COG0313@2|Bacteria,4NFQM@976|Bacteroidetes,1IPC1@117747|Sphingobacteriia	976|Bacteroidetes	H	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA	rsmI	-	2.1.1.198	ko:K07056	-	-	-	-	ko00000,ko01000,ko03009	-	-	-	TP_methylase
BYD3_k127_8665491_0	760192.Halhy_3353	9.388e-210	660.0	COG1249@1|root,COG1249@2|Bacteria,4NDVC@976|Bacteroidetes,1IP5K@117747|Sphingobacteriia	976|Bacteroidetes	C	Dihydrolipoyl dehydrogenase	lpd	-	1.8.1.4	ko:K00382	ko00010,ko00020,ko00260,ko00280,ko00620,ko00630,ko00640,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00020,map00260,map00280,map00620,map00630,map00640,map01100,map01110,map01120,map01130,map01200	M00009,M00011,M00036,M00307,M00532	R00209,R01221,R01698,R03815,R07618,R08549	RC00004,RC00022,RC00583,RC02742,RC02833,RC02834	br01601,ko00000,ko00001,ko00002,ko01000,ko04147	-	-	-	Pyr_redox_2,Pyr_redox_dim
BYD3_k127_8665491_2	760192.Halhy_3177	4.446e-143	470.0	COG1774@1|root,COG1774@2|Bacteria,4NENX@976|Bacteroidetes,1IQGD@117747|Sphingobacteriia	976|Bacteroidetes	S	PFAM PSP1 C-terminal conserved region	-	-	-	-	-	-	-	-	-	-	-	-	PSP1
BYD3_k127_8665491_6	760192.Halhy_3176	7.22e-60	221.0	COG0470@1|root,COG0470@2|Bacteria,4NEYF@976|Bacteroidetes,1INPG@117747|Sphingobacteriia	976|Bacteroidetes	L	COG2812 DNA polymerase III, gamma tau subunits	holB	-	2.7.7.7	ko:K02341	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	M00260	R00375,R00376,R00377,R00378	RC02795	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	-	-	-	DNA_pol3_delta2
BYD3_k127_8665491_7	28115.HR11_08725	2.747e-48	177.0	COG0386@1|root,COG0386@2|Bacteria,4NM6G@976|Bacteroidetes,2FQY1@200643|Bacteroidia,22XUD@171551|Porphyromonadaceae	976|Bacteroidetes	O	Belongs to the glutathione peroxidase family	bsaA	-	1.11.1.9	ko:K00432	ko00480,ko00590,ko04918,map00480,map00590,map04918	-	R00274,R07034,R07035	RC00011,RC00982	ko00000,ko00001,ko01000	-	-	-	GSHPx
BYD3_k127_8665491_3	700598.Niako_6200	1.034e-86	291.0	COG0663@1|root,COG0663@2|Bacteria,4NG5P@976|Bacteroidetes,1IVF8@117747|Sphingobacteriia	976|Bacteroidetes	S	Hexapeptide repeat of succinyl-transferase	paaY	-	-	ko:K02617,ko:K08279	-	-	-	-	ko00000	-	-	-	Hexapep
BYD3_k127_8665491_1	1122176.KB903531_gene2955	3.928e-151	507.0	COG5276@1|root,COG5276@2|Bacteria,4NDUD@976|Bacteroidetes,1IYS6@117747|Sphingobacteriia	976|Bacteroidetes	S	cellulase activity	-	-	-	-	-	-	-	-	-	-	-	-	CarboxypepD_reg,LVIVD,MAM,TSP_3,fn3
BYD3_k127_8665491_5	700598.Niako_6077	2.877e-84	283.0	COG1012@1|root,COG2030@1|root,COG1012@2|Bacteria,COG2030@2|Bacteria,4NI68@976|Bacteroidetes,1IV6E@117747|Sphingobacteriia	976|Bacteroidetes	CI	MaoC like domain	paaN	-	1.2.1.91,3.3.2.12	ko:K02618	ko00360,ko01120,map00360,map01120	-	R09820,R09836	RC00080,RC02667	ko00000,ko00001,ko01000	-	-	-	Aldedh,DUF1569,MaoC_dehydratas
BYD3_k127_8686614_0	1117647.M5M_13590	7.869e-211	668.0	COG3119@1|root,COG3119@2|Bacteria,1MV92@1224|Proteobacteria,1RPDE@1236|Gammaproteobacteria,1J8XH@118884|unclassified Gammaproteobacteria	1236|Gammaproteobacteria	P	COG3119 Arylsulfatase A and related enzymes	-	-	3.1.6.1	ko:K01130	ko00140,ko00600,map00140,map00600	-	R03980,R04856	RC00128,RC00231	ko00000,ko00001,ko01000	-	-	-	Sulfatase
BYD3_k127_8720109_0	1122176.KB903571_gene4793	4.931e-64	225.0	COG0272@1|root,COG0272@2|Bacteria,4NE2X@976|Bacteroidetes,1IQAI@117747|Sphingobacteriia	976|Bacteroidetes	L	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA	ligA	-	6.5.1.2	ko:K01972	ko03030,ko03410,ko03420,ko03430,map03030,map03410,map03420,map03430	-	R00382	RC00005	ko00000,ko00001,ko01000,ko03032,ko03400	-	-	-	BRCT,DNA_ligase_OB,DNA_ligase_ZBD,DNA_ligase_aden,HHH_2,HHH_5
BYD3_k127_8720109_3	391587.KAOT1_04917	3.004e-41	157.0	COG0824@1|root,COG0824@2|Bacteria,4NK6Y@976|Bacteroidetes,1I2SF@117743|Flavobacteriia	976|Bacteroidetes	S	Thioesterase-like superfamily	-	-	-	ko:K07107	-	-	-	-	ko00000,ko01000	-	-	-	4HBT_2,Acyl-ACP_TE
BYD3_k127_8720109_1	1380384.JADN01000007_gene1537	1.177e-52	193.0	COG0204@1|root,COG0204@2|Bacteria,4NNG7@976|Bacteroidetes,1I28N@117743|Flavobacteriia	976|Bacteroidetes	I	Acyltransferase	-	-	-	-	-	-	-	-	-	-	-	-	Acyltransferase
BYD3_k127_8720109_2	926556.Echvi_2774	2.16e-49	181.0	COG1595@1|root,COG1595@2|Bacteria,4NMC0@976|Bacteroidetes,47N5B@768503|Cytophagia	976|Bacteroidetes	K	Belongs to the sigma-70 factor family. ECF subfamily	rpoE	-	-	ko:K03088	-	-	-	-	ko00000,ko03021	-	-	-	Sigma70_r2,Sigma70_r4_2
BYD3_k127_8720109_4	1120951.AUBG01000001_gene941	3.327e-18	90.0	2DPE1@1|root,331PZ@2|Bacteria,4NV5C@976|Bacteroidetes,1I5A4@117743|Flavobacteriia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_8720109_5	1313421.JHBV01000032_gene1570	2.11e-09	66.0	COG0457@1|root,COG0457@2|Bacteria,4NG1I@976|Bacteroidetes,1IPQK@117747|Sphingobacteriia	976|Bacteroidetes	S	PFAM Tetratricopeptide repeat	-	-	-	-	-	-	-	-	-	-	-	-	TPR_1,TPR_16,TPR_19,TPR_2,TPR_6,TPR_7,TPR_8
BYD3_k127_8756925_4	1121481.AUAS01000013_gene4213	2.129e-13	70.0	COG0363@1|root,COG0363@2|Bacteria,4NFCM@976|Bacteroidetes,47PHR@768503|Cytophagia	976|Bacteroidetes	G	Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase	-	-	3.5.99.6	ko:K02564	ko00520,ko01100,map00520,map01100	-	R00765	RC00163	ko00000,ko00001,ko01000	-	-	-	Glucosamine_iso
BYD3_k127_8756925_0	485917.Phep_1696	3.288e-221	692.0	COG0738@1|root,COG0738@2|Bacteria,4NEYR@976|Bacteroidetes,1IR81@117747|Sphingobacteriia	976|Bacteroidetes	G	glucose galactose transporter	-	-	-	ko:K02429	-	-	-	-	ko00000,ko02000	2.A.1.7	-	-	MFS_1
BYD3_k127_8756925_1	1123248.KB893325_gene1152	9.557e-195	613.0	COG1820@1|root,COG1820@2|Bacteria,4NJ35@976|Bacteroidetes,1IPWP@117747|Sphingobacteriia	976|Bacteroidetes	G	Belongs to the metallo-dependent hydrolases superfamily. NagA family	-	-	3.5.1.25	ko:K01443	ko00520,ko01130,map00520,map01130	-	R02059	RC00166,RC00300	ko00000,ko00001,ko01000	-	-	-	Amidohydro_1
BYD3_k127_8756925_2	1237149.C900_03067	1.701e-98	330.0	28M39@1|root,2ZAHI@2|Bacteria,4NM3I@976|Bacteroidetes	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_8756925_3	1237149.C900_03068	1.297e-63	227.0	2CDET@1|root,2ZBN1@2|Bacteria,4NN6D@976|Bacteroidetes	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_875908_3	1167632.AJTR01000037_gene322	2.439e-05	47.0	COG0115@1|root,COG0115@2|Bacteria,1TPY2@1239|Firmicutes,4HAWW@91061|Bacilli,4GXAW@90964|Staphylococcaceae	91061|Bacilli	E	Acts on the D-isomers of alanine, leucine, aspartate, glutamate, aminobutyrate, norvaline and asparagine. The enzyme transfers an amino group from a substrate D-amino acid to the pyridoxal phosphate cofactor to form pyridoxamine and an alpha- keto acid in the first half-reaction	dat	GO:0003674,GO:0003824,GO:0005488,GO:0006082,GO:0006520,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008483,GO:0008652,GO:0009056,GO:0009058,GO:0009063,GO:0009987,GO:0016053,GO:0016054,GO:0016740,GO:0016769,GO:0019478,GO:0019752,GO:0019842,GO:0030170,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044281,GO:0044282,GO:0044283,GO:0046394,GO:0046395,GO:0046416,GO:0046437,GO:0047810,GO:0048037,GO:0050662,GO:0070279,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576,GO:1901605,GO:1901606,GO:1901607	2.6.1.21	ko:K00824	ko00310,ko00330,ko00360,ko00472,ko00473,ko01100,map00310,map00330,map00360,map00472,map00473,map01100	-	R01148,R01582,R02459,R02851,R02924,R05053	RC00006,RC00008,RC00025	ko00000,ko00001,ko01000,ko01007	-	-	-	Aminotran_4
BYD3_k127_875908_1	1168034.FH5T_04810	2.641e-113	368.0	COG0221@1|root,COG0221@2|Bacteria,4NGBU@976|Bacteroidetes,2FRF9@200643|Bacteroidia	976|Bacteroidetes	C	Catalyzes the hydrolysis of	ppa	-	3.6.1.1	ko:K01507	ko00190,map00190	-	-	-	ko00000,ko00001,ko01000	-	-	-	Pyrophosphatase
BYD3_k127_875908_0	1202532.FF52_17143	2.044e-237	746.0	COG5434@1|root,COG5434@2|Bacteria,4NG4T@976|Bacteroidetes,1HZZB@117743|Flavobacteriia,2NSEJ@237|Flavobacterium	976|Bacteroidetes	G	Belongs to the glycosyl hydrolase 28 family	-	-	-	-	-	-	-	-	-	-	-	-	Glyco_hydro_28,Pectate_lyase_3
BYD3_k127_875908_2	385682.AFSL01000092_gene751	4.242e-54	194.0	COG3507@1|root,COG3507@2|Bacteria,4NFXE@976|Bacteroidetes,2FNGR@200643|Bacteroidia,3XJ87@558415|Marinilabiliaceae	976|Bacteroidetes	G	Glycosyl hydrolases family 43	xynBA	-	-	-	-	-	-	-	-	-	-	-	Glyco_hydro_43
BYD3_k127_8786693_2	1250232.JQNJ01000001_gene3032	7.177e-37	144.0	28NRS@1|root,2ZBQZ@2|Bacteria,4NMM5@976|Bacteroidetes,1HYDM@117743|Flavobacteriia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_8786693_1	760192.Halhy_5427	2.911e-112	367.0	COG0247@1|root,COG0247@2|Bacteria,4NDZS@976|Bacteroidetes,1IP0Z@117747|Sphingobacteriia	976|Bacteroidetes	C	Fe-S oxidoreductase	-	-	-	-	-	-	-	-	-	-	-	-	CCG
BYD3_k127_8786693_0	1122176.KB903609_gene5225	2.057e-165	531.0	COG1150@1|root,COG1150@2|Bacteria,4NF3K@976|Bacteroidetes,1IQ7C@117747|Sphingobacteriia	976|Bacteroidetes	C	Fe-S oxidoreductase	-	-	-	-	-	-	-	-	-	-	-	-	Fer4_8,Fer4_9
BYD3_k127_8790346_2	153721.MYP_4447	6.546e-10	70.0	COG1807@1|root,COG1807@2|Bacteria,4NQJA@976|Bacteroidetes,47R5I@768503|Cytophagia	976|Bacteroidetes	M	Dolichyl-phosphate-mannose-protein mannosyltransferase	-	-	-	-	-	-	-	-	-	-	-	-	PMT_2
BYD3_k127_8790346_0	755732.Fluta_2106	1.077e-86	294.0	COG0284@1|root,COG0284@2|Bacteria,4NE12@976|Bacteroidetes,1HX31@117743|Flavobacteriia,2PAIF@246874|Cryomorphaceae	976|Bacteroidetes	F	TIGRFAM Orotidine 5'-phosphate decarboxylase, subfamily 2	pyrF	GO:0003674,GO:0003824,GO:0004590,GO:0006139,GO:0006206,GO:0006207,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009112,GO:0009987,GO:0016829,GO:0016830,GO:0016831,GO:0018130,GO:0019856,GO:0034641,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046112,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576	4.1.1.23	ko:K01591	ko00240,ko01100,map00240,map01100	M00051	R00965	RC00409	ko00000,ko00001,ko00002,ko01000	-	-	-	OMPdecase
BYD3_k127_8790346_1	760192.Halhy_6503	1.434e-27	114.0	COG0694@1|root,COG0694@2|Bacteria,4NSHJ@976|Bacteroidetes,1IU7U@117747|Sphingobacteriia	976|Bacteroidetes	O	NifU-like domain	nfuA	-	-	-	-	-	-	-	-	-	-	-	NifU
BYD3_k127_8792588_3	1121899.Q764_13255	4.125e-53	192.0	COG0457@1|root,COG0457@2|Bacteria,4NH87@976|Bacteroidetes,1HZMD@117743|Flavobacteriia,2NV6G@237|Flavobacterium	976|Bacteroidetes	S	Tetratricopeptide repeat	-	-	-	-	-	-	-	-	-	-	-	-	TPR_8
BYD3_k127_8792588_0	714943.Mucpa_1472	1.071e-218	687.0	COG0531@1|root,COG0531@2|Bacteria,4NH7J@976|Bacteroidetes,1IPWD@117747|Sphingobacteriia	976|Bacteroidetes	E	Amino acid permease	-	-	-	ko:K03294	-	-	-	-	ko00000	2.A.3.2	-	-	AA_permease_2
BYD3_k127_8792588_1	1356852.N008_03065	4.574e-162	522.0	COG1301@1|root,COG1301@2|Bacteria,4NDUU@976|Bacteroidetes,47KI1@768503|Cytophagia	976|Bacteroidetes	C	Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family	gltP	-	-	ko:K11102,ko:K11103	ko02020,map02020	-	-	-	ko00000,ko00001,ko02000	2.A.23.1.1,2.A.23.1.2,2.A.23.1.3,2.A.23.1.6,2.A.23.1.7	-	-	SDF
BYD3_k127_8792588_2	1408813.AYMG01000029_gene4719	1.753e-141	462.0	COG0306@1|root,COG0306@2|Bacteria,4NE7J@976|Bacteroidetes,1IR63@117747|Sphingobacteriia	976|Bacteroidetes	P	Phosphate transporter family	-	-	-	ko:K03306	-	-	-	-	ko00000	2.A.20	-	-	PHO4
BYD3_k127_8792588_4	1122176.KB903554_gene3849	7.007e-53	193.0	COG5544@1|root,COG5544@2|Bacteria,4NGNB@976|Bacteroidetes,1IXKD@117747|Sphingobacteriia	976|Bacteroidetes	S	Predicted periplasmic lipoprotein (DUF2279)	-	-	-	-	-	-	-	-	-	-	-	-	DUF2279
BYD3_k127_8797280_2	391603.FBALC1_17032	7.02e-22	99.0	COG3279@1|root,COG3292@1|root,COG3279@2|Bacteria,COG3292@2|Bacteria,4NK8Q@976|Bacteroidetes,1IMWE@117743|Flavobacteriia	976|Bacteroidetes	T	Two component regulator propeller	-	-	-	-	-	-	-	-	-	-	-	-	HATPase_c,HTH_18,HisKA,HisKA_2,Reg_prop,Response_reg,Y_Y_Y
BYD3_k127_8797280_1	1123276.KB893251_gene3614	1.695e-35	139.0	COG1017@1|root,COG1017@2|Bacteria,4NS54@976|Bacteroidetes,47QWP@768503|Cytophagia	976|Bacteroidetes	C	Globin	-	-	-	-	-	-	-	-	-	-	-	-	Globin
BYD3_k127_8797280_3	1121481.AUAS01000007_gene1155	7.789e-22	109.0	COG5295@1|root,COG5295@2|Bacteria,4PPK6@976|Bacteroidetes	2|Bacteria	UW	Hep Hag repeat protein	-	-	-	-	-	-	-	-	-	-	-	-	YadA_stalk
BYD3_k127_8797280_4	1305737.JAFX01000001_gene153	4.358e-17	84.0	COG3279@1|root,COG3279@2|Bacteria,4NNHE@976|Bacteroidetes,47XDX@768503|Cytophagia	976|Bacteroidetes	T	LytTr DNA-binding domain	-	-	-	ko:K02477	-	-	-	-	ko00000,ko02022	-	-	-	LytTR,Response_reg
BYD3_k127_8797280_0	172045.KS04_12165	1.028e-55	203.0	COG1388@1|root,COG1388@2|Bacteria	2|Bacteria	M	LysM domain	-	-	-	-	-	-	-	-	-	-	-	-	LysM
BYD3_k127_8801704_2	319236.JCM19294_2698	1.485e-50	188.0	COG3239@1|root,COG3239@2|Bacteria,4NIC2@976|Bacteroidetes,1HYBV@117743|Flavobacteriia,3HK2S@363408|Nonlabens	976|Bacteroidetes	I	Fatty acid desaturase	alkB	-	1.14.15.3	ko:K00496	ko00071,ko00930,map00071,map00930	-	R01347,R02281,R06945	RC00478	ko00000,ko00001,ko01000	-	-	-	FA_desaturase
BYD3_k127_8801704_1	760192.Halhy_3302	1.983e-95	325.0	COG1018@1|root,COG1018@2|Bacteria,4NF24@976|Bacteroidetes,1IR7M@117747|Sphingobacteriia	976|Bacteroidetes	C	2Fe-2S iron-sulfur cluster binding domain	paaE	-	-	ko:K02613	ko00360,ko01120,map00360,map01120	-	R09838	RC02690	ko00000,ko00001	-	-	-	FAD_binding_6,Fer2,NAD_binding_1
BYD3_k127_8801704_0	760192.Halhy_3188	5.403e-177	561.0	COG0438@1|root,COG0438@2|Bacteria,4NFPA@976|Bacteroidetes,1IPP6@117747|Sphingobacteriia	976|Bacteroidetes	M	N-acetyl-alpha-D-glucosaminyl L-malate synthase	bshA	-	-	ko:K00754	-	-	-	-	ko00000,ko01000	-	GT4	-	Glyco_transf_4,Glycos_transf_1
BYD3_k127_8801704_4	1122176.KB903543_gene619	2.561e-44	172.0	COG0789@1|root,COG5012@1|root,COG0789@2|Bacteria,COG5012@2|Bacteria,4NERC@976|Bacteroidetes,1IS5U@117747|Sphingobacteriia	976|Bacteroidetes	K	MerR family	-	-	-	ko:K22491	-	-	-	-	ko00000,ko03000	-	-	-	B12-binding,B12-binding_2,MerR_1
BYD3_k127_8801704_3	1392490.JHZX01000001_gene3040	4.708e-45	171.0	COG2353@1|root,COG2353@2|Bacteria,4NMFT@976|Bacteroidetes,1I1D2@117743|Flavobacteriia	976|Bacteroidetes	S	Belongs to the UPF0312 family	-	-	-	-	-	-	-	-	-	-	-	-	YceI
BYD3_k127_8801704_5	1121904.ARBP01000006_gene3674	4.726e-37	147.0	COG0494@1|root,COG0494@2|Bacteria,4NHER@976|Bacteroidetes,47MQ4@768503|Cytophagia	976|Bacteroidetes	L	NUDIX domain	-	-	3.6.1.13	ko:K01515	ko00230,map00230	-	R01054	RC00002	ko00000,ko00001,ko01000	-	-	-	NUDIX
BYD3_k127_8804133_3	760192.Halhy_6067	4.714e-34	138.0	COG3209@1|root,COG3209@2|Bacteria,4PKBQ@976|Bacteroidetes	976|Bacteroidetes	M	SPTR CHU large protein	-	-	-	-	-	-	-	-	-	-	-	-	CHU_C,DUF5011,HYR,Laminin_G_3,SprB
BYD3_k127_8804133_0	1123277.KB893174_gene5927	1.511e-88	319.0	COG2972@1|root,COG3292@1|root,COG2972@2|Bacteria,COG3292@2|Bacteria,4NFZB@976|Bacteroidetes,47XEG@768503|Cytophagia	976|Bacteroidetes	T	Histidine kinase	-	-	-	-	-	-	-	-	-	-	-	-	His_kinase,Reg_prop,Y_Y_Y
BYD3_k127_8804133_1	700598.Niako_2039	7.012e-65	230.0	COG3279@1|root,COG3279@2|Bacteria,4NFPV@976|Bacteroidetes,1IXPB@117747|Sphingobacteriia	976|Bacteroidetes	T	LytTr DNA-binding domain	-	-	-	ko:K02477	-	-	-	-	ko00000,ko02022	-	-	-	LytTR,Response_reg
BYD3_k127_8804133_2	1239962.C943_02138	1.609e-42	157.0	2BWYK@1|root,32R5D@2|Bacteria,4NS4D@976|Bacteroidetes,47UWC@768503|Cytophagia	976|Bacteroidetes	T	PAS domain	-	-	-	-	-	-	-	-	-	-	-	-	PAS_4,PAS_8
BYD3_k127_881598_3	1121930.AQXG01000010_gene3064	6.459e-13	68.0	COG0614@1|root,COG0614@2|Bacteria,4NQ88@976|Bacteroidetes,1IT7V@117747|Sphingobacteriia	976|Bacteroidetes	P	PD-(D/E)XK nuclease superfamily	-	-	-	-	-	-	-	-	-	-	-	-	PDDEXK_3
BYD3_k127_881598_0	880070.Cycma_1167	4.6e-112	369.0	COG0454@1|root,COG0454@2|Bacteria	2|Bacteria	K	-acetyltransferase	-	-	2.3.1.59	ko:K17840	-	-	-	-	br01600,ko00000,ko01000,ko01504	-	-	-	Acetyltransf_1,Acetyltransf_10
BYD3_k127_881598_2	1160137.KB907307_gene3164	3.72e-19	100.0	COG1073@1|root,COG1073@2|Bacteria,2IA0F@201174|Actinobacteria,4FUH3@85025|Nocardiaceae	201174|Actinobacteria	S	BAAT / Acyl-CoA thioester hydrolase C terminal	-	-	-	ko:K06889	-	-	-	-	ko00000	-	-	-	Hydrolase_4
BYD3_k127_881598_1	1123234.AUKI01000020_gene913	6.967e-26	109.0	290G7@1|root,2ZN59@2|Bacteria,4P86U@976|Bacteroidetes	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_884938_2	1122176.KB903609_gene5203	5.575e-53	192.0	COG1595@1|root,COG1595@2|Bacteria,4NP5U@976|Bacteroidetes,1IS8X@117747|Sphingobacteriia	976|Bacteroidetes	K	RNA polymerase sigma factor, sigma-70 family	-	-	-	ko:K03088	-	-	-	-	ko00000,ko03021	-	-	-	Sigma70_r2,Sigma70_r4_2
BYD3_k127_884938_3	1237149.C900_02627	2.035e-29	125.0	2EDHQ@1|root,30K5G@2|Bacteria,4PC44@976|Bacteroidetes,47WSK@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_884938_1	984262.SGRA_0369	2.238e-105	356.0	COG5276@1|root,COG5276@2|Bacteria,4NG4W@976|Bacteroidetes,1IQNH@117747|Sphingobacteriia	976|Bacteroidetes	S	LVIVD repeat	-	-	-	-	-	-	-	-	-	-	-	-	LVIVD
BYD3_k127_884938_0	391603.FBALC1_15292	8.949e-184	590.0	COG3525@1|root,COG3525@2|Bacteria,4NE08@976|Bacteroidetes,1HXU1@117743|Flavobacteriia	976|Bacteroidetes	G	Glycosyl hydrolase family 20, catalytic domain	-	-	3.2.1.52	ko:K12373	ko00511,ko00513,ko00520,ko00531,ko00603,ko00604,ko01100,ko04142,map00511,map00513,map00520,map00531,map00603,map00604,map01100,map04142	M00079	R00022,R06004,R11316	RC00049	ko00000,ko00001,ko00002,ko01000,ko03110	-	GH20	-	CHB_HEX_C_1,F5_F8_type_C,Fn3_assoc,Glyco_hydro_20,Glyco_hydro_20b
BYD3_k127_884938_4	1121912.AUHD01000008_gene81	4.123e-23	100.0	COG3525@1|root,COG3525@2|Bacteria,4NE08@976|Bacteroidetes,1HXU1@117743|Flavobacteriia	976|Bacteroidetes	G	Glycosyl hydrolase family 20, catalytic domain	-	-	3.2.1.52	ko:K12373	ko00511,ko00513,ko00520,ko00531,ko00603,ko00604,ko01100,ko04142,map00511,map00513,map00520,map00531,map00603,map00604,map01100,map04142	M00079	R00022,R06004,R11316	RC00049	ko00000,ko00001,ko00002,ko01000,ko03110	-	GH20	-	CHB_HEX_C_1,F5_F8_type_C,Fn3_assoc,Glyco_hydro_20,Glyco_hydro_20b
BYD3_k127_8850738_3	760192.Halhy_0274	2.958e-35	150.0	COG0204@1|root,COG0204@2|Bacteria,4NN7X@976|Bacteroidetes,1IYSE@117747|Sphingobacteriia	976|Bacteroidetes	I	Phosphate acyltransferases	-	-	-	-	-	-	-	-	-	-	-	-	Acyltransferase
BYD3_k127_8850738_0	1406840.Q763_07765	1.003e-87	300.0	COG0324@1|root,COG0324@2|Bacteria,4NEAE@976|Bacteroidetes,1HXKT@117743|Flavobacteriia,2NT5Y@237|Flavobacterium	976|Bacteroidetes	J	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)	miaA	GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016765,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0052381,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360	2.5.1.75	ko:K00791	ko00908,ko01100,ko01110,map00908,map01100,map01110	-	R01122	RC02820	ko00000,ko00001,ko01000,ko01006,ko03016	-	-	-	IPPT
BYD3_k127_8850738_4	1185876.BN8_03106	1.222e-26	113.0	2DPSP@1|root,33387@2|Bacteria,4NVSW@976|Bacteroidetes,47T2S@768503|Cytophagia	976|Bacteroidetes	J	23S rRNA-intervening sequence protein	-	-	-	-	-	-	-	-	-	-	-	-	23S_rRNA_IVP
BYD3_k127_8850738_1	1111730.ATTM01000001_gene1446	1.305e-45	174.0	COG0566@1|root,COG0566@2|Bacteria,4NG1U@976|Bacteroidetes,1HY9B@117743|Flavobacteriia,2NS92@237|Flavobacterium	976|Bacteroidetes	J	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family	aviRb	-	-	ko:K03437	-	-	-	-	ko00000,ko03016	-	-	-	SpoU_methylase,SpoU_sub_bind
BYD3_k127_8850738_2	760192.Halhy_1081	2.377e-44	176.0	COG4775@1|root,COG4775@2|Bacteria,4NE80@976|Bacteroidetes,1IPP9@117747|Sphingobacteriia	976|Bacteroidetes	M	Outer membrane protein protective antigen OMA87	-	-	-	-	-	-	-	-	-	-	-	-	Bac_surface_Ag,POTRA
BYD3_k127_8866406_2	1122176.KB903544_gene801	6.841e-94	328.0	COG3291@1|root,COG3291@2|Bacteria,4NDZC@976|Bacteroidetes,1J19E@117747|Sphingobacteriia	976|Bacteroidetes	S	C-terminal domain of CHU protein family	-	-	-	-	-	-	-	-	-	-	-	-	CHU_C,DUF11,PKD,SprB
BYD3_k127_8866406_7	984262.SGRA_1775	3.442e-25	113.0	COG3117@1|root,COG3117@2|Bacteria,4NRIN@976|Bacteroidetes	976|Bacteroidetes	S	Lipopolysaccharide-assembly, LptC-related	-	-	-	-	-	-	-	-	-	-	-	-	LptC
BYD3_k127_8866406_1	1122176.KB903544_gene800	1.71e-102	348.0	COG1253@1|root,COG1253@2|Bacteria,4NG0I@976|Bacteroidetes,1IX4W@117747|Sphingobacteriia	976|Bacteroidetes	S	Transporter associated domain	tlyC	-	-	ko:K03699	-	-	-	-	ko00000,ko02042	-	-	-	CBS,CorC_HlyC,DUF21
BYD3_k127_8866406_3	1122176.KB903619_gene5332	2.265e-90	321.0	COG4206@1|root,COG4206@2|Bacteria,4NED9@976|Bacteroidetes,1IQW0@117747|Sphingobacteriia	976|Bacteroidetes	H	TonB-dependent receptor plug	btuB	-	-	ko:K02014	-	-	-	-	ko00000,ko02000	1.B.14	-	-	Plug,TonB_dep_Rec
BYD3_k127_8866406_4	1122176.KB903619_gene5331	1.767e-71	254.0	2DMBB@1|root,32GIQ@2|Bacteria,4NSXP@976|Bacteroidetes	976|Bacteroidetes	S	Domain of unknown function (DUF4465)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4465
BYD3_k127_8866406_5	1122176.KB903561_gene3586	5.696e-49	183.0	COG2353@1|root,COG2353@2|Bacteria,4NI82@976|Bacteroidetes,1IXPV@117747|Sphingobacteriia	976|Bacteroidetes	S	YceI-like domain	-	-	-	-	-	-	-	-	-	-	-	-	YceI
BYD3_k127_8866406_0	1122176.KB903561_gene3587	2.015e-172	576.0	COG2972@1|root,COG3292@1|root,COG2972@2|Bacteria,COG3292@2|Bacteria,4NJMF@976|Bacteroidetes,1IWR7@117747|Sphingobacteriia	976|Bacteroidetes	T	Y_Y_Y domain	-	-	-	-	-	-	-	-	-	-	-	-	His_kinase,Reg_prop,Y_Y_Y
BYD3_k127_8866406_6	1166018.FAES_5133	9.418e-42	158.0	COG3279@1|root,COG3279@2|Bacteria,4NGBF@976|Bacteroidetes,47M8M@768503|Cytophagia	976|Bacteroidetes	K	Two component transcriptional regulator, LytTR family	-	-	-	-	-	-	-	-	-	-	-	-	LytTR,Response_reg
BYD3_k127_8873924_7	1122599.AUGR01000019_gene3070	1.792e-06	50.0	2CI52@1|root,2ZC5H@2|Bacteria,1R9WI@1224|Proteobacteria,1S37R@1236|Gammaproteobacteria	1236|Gammaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_8873924_6	99598.Cal7507_3732	2.156e-28	117.0	COG1652@1|root,COG1652@2|Bacteria	2|Bacteria	S	positive regulation of growth rate	ygaU	GO:0003674,GO:0005488,GO:0008150,GO:0010035,GO:0010038,GO:0030955,GO:0031420,GO:0035864,GO:0042221,GO:0043167,GO:0043169,GO:0046872,GO:0050896	-	-	-	-	-	-	-	-	-	-	BON,LysM
BYD3_k127_8873924_1	279714.FuraDRAFT_1962	8.344e-144	464.0	COG3500@1|root,COG3500@2|Bacteria,1Q2U5@1224|Proteobacteria,2VMWF@28216|Betaproteobacteria	28216|Betaproteobacteria	S	Late control gene D protein	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_8873924_3	765912.Thimo_0790	4.087e-76	258.0	COG3501@1|root,COG3501@2|Bacteria,1R540@1224|Proteobacteria,1RTBU@1236|Gammaproteobacteria,1X1J3@135613|Chromatiales	135613|Chromatiales	S	Baseplate assembly protein	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_8873924_4	926550.CLDAP_40840	1.255e-39	151.0	2CE1N@1|root,32RYY@2|Bacteria,2G6YF@200795|Chloroflexi	200795|Chloroflexi	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_8873924_5	99598.Cal7507_3736	4.645e-32	128.0	COG3628@1|root,COG3628@2|Bacteria,1G80D@1117|Cyanobacteria	1117|Cyanobacteria	S	PFAM Gene 25-like lysozyme	-	-	-	ko:K06903	-	-	-	-	ko00000	-	-	-	GPW_gp25
BYD3_k127_8873924_0	279714.FuraDRAFT_1966	8.378e-219	705.0	COG3299@1|root,COG3299@2|Bacteria,1MWKI@1224|Proteobacteria,2VI5M@28216|Betaproteobacteria	28216|Betaproteobacteria	S	homolog of phage Mu protein gp47	-	-	-	-	-	-	-	-	-	-	-	-	Baseplate_J
BYD3_k127_8873924_2	926560.KE387023_gene1989	1.736e-78	271.0	COG3299@1|root,COG3299@2|Bacteria	2|Bacteria	S	Baseplate J-like protein	-	-	-	-	-	-	-	-	-	-	-	-	Baseplate_J
BYD3_k127_8912417_6	525268.HMPREF0308_0203	6.612e-05	46.0	COG0544@1|root,COG0544@2|Bacteria,2GJIG@201174|Actinobacteria,22JV9@1653|Corynebacteriaceae	201174|Actinobacteria	D	Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase	tig	GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006950,GO:0007154,GO:0008150,GO:0009267,GO:0009605,GO:0009987,GO:0009991,GO:0016020,GO:0030312,GO:0031667,GO:0031668,GO:0031669,GO:0033554,GO:0042221,GO:0042594,GO:0044424,GO:0044444,GO:0044464,GO:0046677,GO:0050896,GO:0051716,GO:0071496,GO:0071944	-	ko:K03545	-	-	-	-	ko00000	-	-	-	FKBP_C,Trigger_C,Trigger_N
BYD3_k127_8912417_5	236814.IX39_10050	1.773e-17	82.0	COG0745@1|root,COG0745@2|Bacteria,4NHXA@976|Bacteroidetes,1HZWH@117743|Flavobacteriia	976|Bacteroidetes	KT	transcriptional regulator	-	-	-	-	-	-	-	-	-	-	-	-	Response_reg,Trans_reg_C
BYD3_k127_8912417_2	926562.Oweho_0483	1.964e-126	413.0	COG1858@1|root,COG1858@2|Bacteria,4NE4P@976|Bacteroidetes,1HXUF@117743|Flavobacteriia,2PBJ7@246874|Cryomorphaceae	976|Bacteroidetes	C	PFAM Di-haem cytochrome c peroxidase	-	-	1.11.1.5	ko:K00428	-	-	-	-	ko00000,ko01000	-	-	-	CCP_MauG,Cytochrom_C
BYD3_k127_8912417_0	1122176.KB903551_gene4248	7.754e-135	439.0	COG1858@1|root,COG1858@2|Bacteria,4NE4P@976|Bacteroidetes,1J098@117747|Sphingobacteriia	976|Bacteroidetes	P	Di-haem cytochrome c peroxidase	-	-	1.11.1.5	ko:K00428	-	-	-	-	ko00000,ko01000	-	-	-	CCP_MauG,Cytochrom_C
BYD3_k127_8912417_3	755732.Fluta_4045	1.222e-58	216.0	2DV56@1|root,33U3S@2|Bacteria,4P2K0@976|Bacteroidetes,1IFT9@117743|Flavobacteriia,2PBRX@246874|Cryomorphaceae	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_8912417_4	1121897.AUGO01000003_gene1875	1.123e-25	113.0	COG2608@1|root,COG2608@2|Bacteria,4PPKN@976|Bacteroidetes,1IN4F@117743|Flavobacteriia,2P0SY@237|Flavobacterium	976|Bacteroidetes	P	mercury ion transmembrane transporter activity	-	-	-	-	-	-	-	-	-	-	-	-	HMA
BYD3_k127_8912417_7	1121897.AUGO01000015_gene3320	8.17e-05	47.0	COG2207@1|root,COG2207@2|Bacteria,4NM5G@976|Bacteroidetes,1I18C@117743|Flavobacteriia,2NV4Z@237|Flavobacterium	976|Bacteroidetes	K	AraC family transcriptional	-	-	-	-	-	-	-	-	-	-	-	-	HTH_18
BYD3_k127_8912417_1	1111730.ATTM01000001_gene1385	5.873e-127	419.0	COG2081@1|root,COG2081@2|Bacteria,4NFME@976|Bacteroidetes,1HWY6@117743|Flavobacteriia,2NSIQ@237|Flavobacterium	976|Bacteroidetes	S	flavoprotein	yhiN	-	-	ko:K07007	-	-	-	-	ko00000	-	-	-	HI0933_like
BYD3_k127_8922283_2	1288963.ADIS_0210	1.818e-23	103.0	2CKAK@1|root,32SBZ@2|Bacteria,4NSJ2@976|Bacteroidetes,47RYW@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_8922283_0	1237149.C900_03053	1.739e-164	527.0	COG0823@1|root,COG0823@2|Bacteria,4PMAE@976|Bacteroidetes,47NZ3@768503|Cytophagia	976|Bacteroidetes	U	WD40-like Beta Propeller Repeat	-	-	-	-	-	-	-	-	-	-	-	-	PD40
BYD3_k127_8922283_1	1305737.JAFX01000001_gene2871	3.687e-117	388.0	COG0265@1|root,COG2234@1|root,COG0265@2|Bacteria,COG2234@2|Bacteria,4NFZR@976|Bacteroidetes,47N0I@768503|Cytophagia	976|Bacteroidetes	M	PFAM peptidase M28	-	-	-	-	-	-	-	-	-	-	-	-	PD40,PDZ_2,Peptidase_M28
BYD3_k127_8922598_0	1392488.JHZY01000004_gene3112	3.425e-151	492.0	COG0520@1|root,COG0520@2|Bacteria,4NM0W@976|Bacteroidetes,1I00M@117743|Flavobacteriia,2XJWU@283735|Leeuwenhoekiella	976|Bacteroidetes	E	Aminotransferase class-V	-	-	-	-	-	-	-	-	-	-	-	-	Aminotran_5
BYD3_k127_8922598_1	760192.Halhy_1878	9.587e-45	175.0	COG3509@1|root,COG3509@2|Bacteria	2|Bacteria	Q	xylan catabolic process	-	-	-	ko:K03932	-	-	-	-	ko00000	-	CE1	-	Esterase,Esterase_phd
BYD3_k127_8923314_21	376686.Fjoh_0761	2.58e-15	90.0	COG2849@1|root,COG2849@2|Bacteria,4NI9T@976|Bacteroidetes,1HZ9C@117743|Flavobacteriia	976|Bacteroidetes	S	repeat protein	-	-	-	-	-	-	-	-	-	-	-	-	MORN_2
BYD3_k127_8923314_11	1189612.A33Q_4073	6.814e-82	284.0	COG1194@1|root,COG1194@2|Bacteria,4NDZY@976|Bacteroidetes,47KTH@768503|Cytophagia	976|Bacteroidetes	L	A G-specific adenine glycosylase	mutY	-	-	ko:K03575	ko03410,map03410	-	-	-	ko00000,ko00001,ko01000,ko03400	-	-	-	EndIII_4Fe-2S,HhH-GPD,NUDIX_4
BYD3_k127_8923314_0	313603.FB2170_14833	0.0	1205.0	COG0755@1|root,COG0755@2|Bacteria,4NDY1@976|Bacteroidetes,1HXDN@117743|Flavobacteriia,2PG6S@252356|Maribacter	976|Bacteroidetes	O	Cytochrome C assembly protein	ccmC	-	-	-	-	-	-	-	-	-	-	-	Cytochrom_C_asm,ResB
BYD3_k127_8923314_13	1191523.MROS_1709	6.067e-57	208.0	28PU4@1|root,2ZCF6@2|Bacteria	2|Bacteria	-	-	nrfJ	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_8923314_6	1408473.JHXO01000005_gene1864	7.84e-122	410.0	2919D@1|root,2ZNWG@2|Bacteria,4NMU5@976|Bacteroidetes,2FW6F@200643|Bacteroidia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_8923314_22	631362.Thi970DRAFT_04554	1.976e-12	82.0	COG3005@1|root,COG3005@2|Bacteria,1QZ6I@1224|Proteobacteria,1RXZD@1236|Gammaproteobacteria,1X0FD@135613|Chromatiales	135613|Chromatiales	C	PFAM Class III cytochrome C family	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_8923314_15	1134912.AJTV01000024_gene2803	7.021e-49	203.0	COG0484@1|root,COG0484@2|Bacteria,1MXM9@1224|Proteobacteria,2U31V@28211|Alphaproteobacteria	28211|Alphaproteobacteria	O	heat shock protein binding	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_8923314_3	313603.FB2170_14818	8.376e-174	600.0	COG0484@1|root,COG0484@2|Bacteria,4NPS0@976|Bacteroidetes	976|Bacteroidetes	C	heat shock protein binding	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_8923314_1	313603.FB2170_14813	7.634e-218	692.0	COG0484@1|root,COG0484@2|Bacteria,4P0AH@976|Bacteroidetes	976|Bacteroidetes	C	heat shock protein binding	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_8923314_4	1408473.JHXO01000005_gene1869	1.515e-172	552.0	COG0492@1|root,COG1145@1|root,COG0492@2|Bacteria,COG1145@2|Bacteria,4NDVS@976|Bacteroidetes,2FWNG@200643|Bacteroidia	976|Bacteroidetes	CO	L-lysine 6-monooxygenase (NADPH-requiring)	-	-	-	-	-	-	-	-	-	-	-	-	Fer4_10,Pyr_redox_3
BYD3_k127_8923314_16	880073.Calab_3335	2.819e-45	175.0	COG0492@1|root,COG0492@2|Bacteria	2|Bacteria	C	ferredoxin-NADP+ reductase activity	-	-	-	-	-	-	-	-	-	-	-	-	FAD_binding_2,FAD_oxidored,Pyr_redox_2,Thioredoxin_3,cNMP_binding
BYD3_k127_8923314_7	1122176.KB903543_gene572	4.798e-118	390.0	COG3288@1|root,COG3288@2|Bacteria,4NGH1@976|Bacteroidetes,1IPTC@117747|Sphingobacteriia	976|Bacteroidetes	C	PFAM Alanine dehydrogenase PNT	pntAA	-	1.6.1.2	ko:K00324	ko00760,ko01100,map00760,map01100	-	R00112	RC00001	ko00000,ko00001,ko01000	-	-	-	AlaDh_PNT_C,AlaDh_PNT_N
BYD3_k127_8923314_18	1121957.ATVL01000006_gene2754	1.158e-26	119.0	COG2267@1|root,COG2267@2|Bacteria,4NHA9@976|Bacteroidetes,47PRN@768503|Cytophagia	976|Bacteroidetes	I	PFAM alpha beta hydrolase fold	yfbB	-	-	-	-	-	-	-	-	-	-	-	Abhydrolase_1
BYD3_k127_8923314_17	1121100.JCM6294_749	1.64e-35	138.0	COG1694@1|root,COG1694@2|Bacteria,4NQ3H@976|Bacteroidetes,2FT28@200643|Bacteroidia,4AQWU@815|Bacteroidaceae	976|Bacteroidetes	S	MazG nucleotide pyrophosphohydrolase domain	ypjD	-	-	-	-	-	-	-	-	-	-	-	MazG
BYD3_k127_8923314_14	755732.Fluta_2316	6.388e-56	199.0	COG1490@1|root,COG1490@2|Bacteria,4NNFF@976|Bacteroidetes,1I1XN@117743|Flavobacteriia,2PAV8@246874|Cryomorphaceae	976|Bacteroidetes	J	rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality	dtd	GO:0002161,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006399,GO:0006450,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016070,GO:0016787,GO:0016788,GO:0034641,GO:0034660,GO:0043170,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0051499,GO:0051500,GO:0052689,GO:0065007,GO:0065008,GO:0071704,GO:0090304,GO:0106074,GO:0140098,GO:0140101,GO:1901360	-	ko:K07560	-	-	-	-	ko00000,ko01000,ko03016	-	-	-	Tyr_Deacylase
BYD3_k127_8923314_8	760192.Halhy_3001	3.584e-116	384.0	COG1612@1|root,COG1612@2|Bacteria,4NIT1@976|Bacteroidetes,1IQDH@117747|Sphingobacteriia	976|Bacteroidetes	O	protein required for cytochrome oxidase assembly	ctaA	-	-	ko:K02259	ko00190,ko00860,ko01100,ko01110,ko02020,ko04714,map00190,map00860,map01100,map01110,map02020,map04714	M00154	R07412	RC00769	ko00000,ko00001,ko00002,ko03029	3.D.4.4	-	-	COX15-CtaA
BYD3_k127_8923314_9	1122176.KB903555_gene3743	3.249e-109	359.0	COG2267@1|root,COG2267@2|Bacteria,4NF80@976|Bacteroidetes,1INU7@117747|Sphingobacteriia	976|Bacteroidetes	I	Alpha beta hydrolase	-	-	-	-	-	-	-	-	-	-	-	-	Abhydrolase_1
BYD3_k127_8923314_2	1121904.ARBP01000001_gene5936	5.827e-200	642.0	COG3590@1|root,COG3590@2|Bacteria,4NEYB@976|Bacteroidetes,47JHJ@768503|Cytophagia	976|Bacteroidetes	O	PFAM peptidase M13	pepO	-	3.4.24.71	ko:K01415,ko:K07386	-	-	-	-	ko00000,ko01000,ko01002,ko04147	-	-	-	Peptidase_M13,Peptidase_M13_N
BYD3_k127_8923314_19	755732.Fluta_1939	8.366e-26	111.0	COG4068@1|root,COG4068@2|Bacteria,4NQ3Z@976|Bacteroidetes,1I2T2@117743|Flavobacteriia,2PB51@246874|Cryomorphaceae	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	DUF2116
BYD3_k127_8923314_12	746697.Aeqsu_0986	2.223e-67	238.0	COG0030@1|root,COG0030@2|Bacteria,4NERB@976|Bacteroidetes,1HXMG@117743|Flavobacteriia	976|Bacteroidetes	J	Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits	ksgA	-	2.1.1.182	ko:K02528	-	-	R10716	RC00003,RC03257	ko00000,ko01000,ko03009	-	-	-	RrnaAD
BYD3_k127_8923314_20	984262.SGRA_0323	6.595e-21	107.0	COG1807@1|root,COG1807@2|Bacteria,4NXNF@976|Bacteroidetes,1IZJI@117747|Sphingobacteriia	976|Bacteroidetes	M	4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_8923314_5	1313421.JHBV01000147_gene915	4.047e-124	418.0	2DBCF@1|root,2Z8DB@2|Bacteria,4NG6B@976|Bacteroidetes,1IQA3@117747|Sphingobacteriia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	Caps_assemb_Wzi
BYD3_k127_8923314_10	1122176.KB903548_gene1140	2.856e-90	305.0	COG1663@1|root,COG1663@2|Bacteria,4NE2I@976|Bacteroidetes,1IQ8A@117747|Sphingobacteriia	976|Bacteroidetes	M	Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1- P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA)	lpxK	-	2.7.1.130	ko:K00912	ko00540,ko01100,map00540,map01100	M00060	R04657	RC00002,RC00078	ko00000,ko00001,ko00002,ko01000,ko01005	-	-	-	LpxK
BYD3_k127_893364_0	1122605.KB893648_gene3637	2.754e-130	426.0	COG0464@1|root,COG0464@2|Bacteria,4NJBD@976|Bacteroidetes,1ISED@117747|Sphingobacteriia	976|Bacteroidetes	O	of the AAA class	-	-	-	-	-	-	-	-	-	-	-	-	AAA
BYD3_k127_893364_1	1120951.AUBG01000005_gene2233	1.085e-63	221.0	COG1943@1|root,COG1943@2|Bacteria,4NPPG@976|Bacteroidetes,1IJ2E@117743|Flavobacteriia	976|Bacteroidetes	L	Transposase IS200 like	-	-	-	-	-	-	-	-	-	-	-	-	Y1_Tnp
BYD3_k127_893364_2	1336803.PHEL49_0616	4.026e-47	174.0	COG0454@1|root,COG0456@2|Bacteria,4NP1E@976|Bacteroidetes,1I26T@117743|Flavobacteriia,3VWP7@52959|Polaribacter	976|Bacteroidetes	K	Acetyltransferase (GNAT) domain	-	-	2.3.1.57	ko:K22441	-	-	-	-	ko00000,ko01000	-	-	-	Acetyltransf_1,Acetyltransf_10
BYD3_k127_893364_4	1121481.AUAS01000031_gene2168	4.825e-25	106.0	28ME7@1|root,2ZARX@2|Bacteria,4P47D@976|Bacteroidetes,47W8Z@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	Hemerythrin
BYD3_k127_893364_6	1121481.AUAS01000031_gene2168	6.072e-19	93.0	28ME7@1|root,2ZARX@2|Bacteria,4P47D@976|Bacteroidetes,47W8Z@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	Hemerythrin
BYD3_k127_893364_3	266748.HY04_07895	2.302e-30	134.0	COG4733@1|root,COG4935@1|root,COG4733@2|Bacteria,COG4935@2|Bacteria,4PKYS@976|Bacteroidetes,1IJHR@117743|Flavobacteriia,3ZUN6@59732|Chryseobacterium	976|Bacteroidetes	O	Metallo-peptidase family M12B Reprolysin-like	-	-	-	-	-	-	-	-	-	-	-	-	FTP,MAM,Peptidase_M36,Reprolysin_4,fn3
BYD3_k127_8934999_2	1453500.AT05_01825	1.7e-06	50.0	COG3291@1|root,COG3291@2|Bacteria,4NICC@976|Bacteroidetes	976|Bacteroidetes	S	PFAM PKD domain	-	-	-	-	-	-	-	-	-	-	-	-	CHU_C,PKD
BYD3_k127_8934999_1	1122176.KB903598_gene4693	3.237e-31	128.0	COG1404@1|root,COG3291@1|root,COG1404@2|Bacteria,COG3291@2|Bacteria,4PHZG@976|Bacteroidetes,1IW5N@117747|Sphingobacteriia	976|Bacteroidetes	O	Pregnancy-associated plasma protein-A	-	-	-	-	-	-	-	-	-	-	-	-	CHU_C,Peptidase_M43
BYD3_k127_8946515_1	1122176.KB903535_gene1892	6.898e-66	237.0	COG2067@1|root,COG2067@2|Bacteria,4NIU4@976|Bacteroidetes,1IQ3Y@117747|Sphingobacteriia	976|Bacteroidetes	I	protein CHP03519, membrane, Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	PorP_SprF
BYD3_k127_8946515_0	1122179.KB890458_gene803	2.353e-76	278.0	COG0457@1|root,COG2885@1|root,COG0457@2|Bacteria,COG2885@2|Bacteria	2|Bacteria	M	chlorophyll binding	-	-	-	ko:K21218	ko02040,map02040	-	-	-	ko00000,ko00001,ko02000,ko02035	1.A.30.1	-	-	OmpA
BYD3_k127_8975582_1	1249997.JHZW01000002_gene794	3.163e-26	108.0	COG0251@1|root,COG0251@2|Bacteria,4NPF9@976|Bacteroidetes,1I1J9@117743|Flavobacteriia,2PHH9@252356|Maribacter	976|Bacteroidetes	J	YjgF/chorismate_mutase-like, putative endoribonuclease	-	-	-	-	-	-	-	-	-	-	-	-	YjgF_endoribonc
BYD3_k127_8975582_0	1313421.JHBV01000038_gene2841	4.884e-47	192.0	COG4733@1|root,COG4733@2|Bacteria	2|Bacteria	S	cellulase activity	-	-	-	-	-	-	-	-	-	-	-	-	DUF1080,DUF1983,DUF3672,Glyco_hydro_28,HYR,PA14,Pectate_lyase_3
BYD3_k127_8977448_1	483219.LILAB_29395	1.321e-73	255.0	COG3239@1|root,COG3239@2|Bacteria,1QKDT@1224|Proteobacteria,42ZA2@68525|delta/epsilon subdivisions,2X2MN@28221|Deltaproteobacteria,2YUIW@29|Myxococcales	28221|Deltaproteobacteria	I	fatty acid desaturase	-	-	-	-	-	-	-	-	-	-	-	-	FA_desaturase
BYD3_k127_8977448_2	1122176.KB903541_gene252	2.909e-73	257.0	COG1560@1|root,COG1560@2|Bacteria,4NGQU@976|Bacteroidetes,1IRHE@117747|Sphingobacteriia	976|Bacteroidetes	M	PFAM Bacterial lipid A biosynthesis acyltransferase	waaM	-	2.3.1.241	ko:K02517	ko00540,ko01100,map00540,map01100	M00060	R05146	RC00037,RC00039	ko00000,ko00001,ko00002,ko01000,ko01005	-	-	-	Lip_A_acyltrans
BYD3_k127_8977448_0	485917.Phep_1904	4.893e-145	473.0	COG2270@1|root,COG2270@2|Bacteria,4NEKI@976|Bacteroidetes,1INX9@117747|Sphingobacteriia	976|Bacteroidetes	S	COGs COG2270 Permease of the major facilitator superfamily	-	-	-	ko:K06902	ko04138,map04138	-	-	-	ko00000,ko00001,ko02000,ko04131	2.A.1.24,9.A.15.1	-	-	ATG22
BYD3_k127_8977448_3	760192.Halhy_4481	6.421e-53	204.0	COG2911@1|root,COG2911@2|Bacteria	2|Bacteria	S	protein secretion	-	-	-	-	-	-	-	-	-	-	-	-	Big_4,CBM_3,CHU_C,SprB
BYD3_k127_8980169_2	1123278.KB893546_gene4981	1.998e-09	61.0	2E13P@1|root,32WJ2@2|Bacteria,4NTGM@976|Bacteroidetes,47RAF@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_8980169_1	1121870.AUAA01000011_gene568	1.241e-126	414.0	COG0031@1|root,COG0031@2|Bacteria,4NDZ9@976|Bacteroidetes,1HX09@117743|Flavobacteriia,3HGPB@358033|Chryseobacterium	976|Bacteroidetes	E	Pyridoxal-phosphate dependent enzyme	cysK	-	2.5.1.47,4.2.1.22	ko:K01697,ko:K01738	ko00260,ko00270,ko00920,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00260,map00270,map00920,map01100,map01110,map01120,map01130,map01200,map01230	M00021,M00035,M00338	R00891,R00897,R01290,R03601,R04859,R04942	RC00020,RC00056,RC00069,RC00256,RC00489,RC01246,RC02814,RC02821	ko00000,ko00001,ko00002,ko01000	-	-	-	PALP
BYD3_k127_8980169_0	867902.Ornrh_2122	1.203e-178	568.0	COG0156@1|root,COG0156@2|Bacteria,4NFRY@976|Bacteroidetes,1HWW2@117743|Flavobacteriia	976|Bacteroidetes	H	8-amino-7-oxononanoate synthase	bioF	-	2.3.1.29	ko:K00639	ko00260,map00260	-	R00371	RC00004,RC00394	ko00000,ko00001,ko01000,ko01007	-	-	-	Aminotran_1_2
BYD3_k127_9000980_0	760192.Halhy_3444	2.376e-160	518.0	COG0823@1|root,COG1506@1|root,COG0823@2|Bacteria,COG1506@2|Bacteria,4NETS@976|Bacteroidetes,1IR71@117747|Sphingobacteriia	976|Bacteroidetes	EU	Dipeptidyl peptidase IV (DPP IV) N-terminal region	dpp	-	3.4.14.5	ko:K01278	ko04974,map04974	-	-	-	ko00000,ko00001,ko01000,ko01002,ko04090,ko04147	-	-	-	DPPIV_N,Peptidase_S9
BYD3_k127_9000980_2	1122176.KB903548_gene1181	2.718e-70	243.0	COG1595@1|root,COG1595@2|Bacteria,4NPSM@976|Bacteroidetes,1J06N@117747|Sphingobacteriia	976|Bacteroidetes	K	ECF sigma factor	-	-	-	ko:K03088	-	-	-	-	ko00000,ko03021	-	-	-	Sigma70_r2,Sigma70_r4_2
BYD3_k127_9000980_3	1218108.KB908291_gene627	9.917e-56	199.0	COG2318@1|root,COG2318@2|Bacteria,4NNQI@976|Bacteroidetes,1I28A@117743|Flavobacteriia	976|Bacteroidetes	S	DinB superfamily	yfiT	-	-	-	-	-	-	-	-	-	-	-	DinB_2
BYD3_k127_9000980_1	1122179.KB890414_gene1867	4.697e-106	357.0	COG1058@1|root,COG1546@1|root,COG1058@2|Bacteria,COG1546@2|Bacteria,4NDVV@976|Bacteroidetes,1INYU@117747|Sphingobacteriia	976|Bacteroidetes	S	Belongs to the CinA family	cinA	-	3.5.1.42	ko:K03742,ko:K03743	ko00760,map00760	-	R02322	RC00100	ko00000,ko00001,ko01000	-	-	-	CinA,MoCF_biosynth
BYD3_k127_9016699_1	1121859.KB890739_gene2699	5.254e-68	240.0	COG3540@1|root,COG3540@2|Bacteria,4NDUS@976|Bacteroidetes,47NKM@768503|Cytophagia	976|Bacteroidetes	P	PhoD-like phosphatase	-	-	3.1.3.1	ko:K01113	ko00790,ko01100,ko02020,map00790,map01100,map02020	M00126	R04620	RC00017	ko00000,ko00001,ko00002,ko01000	-	-	-	PhoD
BYD3_k127_9016699_2	1123277.KB893176_gene3729	0.0007209	48.0	2EHH2@1|root,33B8Z@2|Bacteria,4NXJU@976|Bacteroidetes,47TWB@768503|Cytophagia	976|Bacteroidetes	S	SnoaL-like domain	-	-	-	-	-	-	-	-	-	-	-	-	SnoaL_3
BYD3_k127_9016699_0	1121904.ARBP01000021_gene3558	7.738e-137	447.0	COG3525@1|root,COG3525@2|Bacteria,4NH5U@976|Bacteroidetes,47XSX@768503|Cytophagia	976|Bacteroidetes	G	Glycosyl hydrolase, family 20, catalytic domain	-	-	-	-	-	-	-	-	-	-	-	-	Glyco_hydro_20b
BYD3_k127_9031897_1	1122179.KB890419_gene18	1.208e-115	376.0	COG1137@1|root,COG1137@2|Bacteria,4NDUG@976|Bacteroidetes,1IQQ1@117747|Sphingobacteriia	976|Bacteroidetes	S	ABC transporter	lptB	-	-	ko:K06861	ko02010,map02010	M00320	-	-	ko00000,ko00001,ko00002,ko01000,ko02000	1.B.42.1	-	-	ABC_tran,BCA_ABC_TP_C
BYD3_k127_9031897_0	1122176.KB903549_gene1294	1.845e-146	470.0	COG0714@1|root,COG0714@2|Bacteria,4NDVZ@976|Bacteroidetes,1IPXJ@117747|Sphingobacteriia	976|Bacteroidetes	S	PFAM ATPase family associated with various cellular activities (AAA)	moxR	-	-	ko:K03924	-	-	-	-	ko00000,ko01000	-	-	-	AAA_3
BYD3_k127_92458_3	1122179.KB890436_gene1277	8.76e-37	142.0	28K10@1|root,2Z9QW@2|Bacteria,4NF8J@976|Bacteroidetes,1ISKT@117747|Sphingobacteriia	976|Bacteroidetes	S	Domain of unknown function (DUF4918)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4918
BYD3_k127_92458_1	760192.Halhy_4853	2.078e-86	295.0	COG4874@1|root,COG4874@2|Bacteria,4NFG3@976|Bacteroidetes,1IQ05@117747|Sphingobacteriia	976|Bacteroidetes	S	Amidinotransferase	-	-	-	-	-	-	-	-	-	-	-	-	Amidinotransf
BYD3_k127_92458_0	1122176.KB903554_gene3989	0.0	1042.0	COG1770@1|root,COG1770@2|Bacteria,4NEQS@976|Bacteroidetes,1IQQY@117747|Sphingobacteriia	976|Bacteroidetes	E	Peptidase S9, prolyl oligopeptidase, catalytic domain	ptrB	-	3.4.21.83	ko:K01354	ko05142,ko05143,map05142,map05143	-	-	-	ko00000,ko00001,ko01000,ko01002	-	-	-	Peptidase_S9,Peptidase_S9_N
BYD3_k127_92458_4	746697.Aeqsu_0064	0.0003764	51.0	COG3209@1|root,COG3209@2|Bacteria,4P4S5@976|Bacteroidetes,1I9QT@117743|Flavobacteriia	976|Bacteroidetes	M	COG3209 Rhs family protein	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_92458_2	1236514.BAKL01000005_gene685	1.548e-66	229.0	COG4975@1|root,COG4975@2|Bacteria,4NF22@976|Bacteroidetes,2FMYN@200643|Bacteroidia,4AM1Y@815|Bacteroidaceae	976|Bacteroidetes	G	COG NOG04879 non supervised orthologous group	-	-	-	ko:K05340	-	-	-	-	ko00000,ko02000	2.A.7.5	-	-	Ureide_permease
BYD3_k127_938605_0	1047013.AQSP01000075_gene1424	0.0	1181.0	COG0793@1|root,COG4946@1|root,COG0793@2|Bacteria,COG4946@2|Bacteria,2NQEH@2323|unclassified Bacteria	2|Bacteria	M	Tricorn protease C1 domain	-	-	-	ko:K08676	-	-	-	-	ko00000,ko01000,ko01002	-	-	-	PD40,Peptidase_S41,Tricorn_C1,Tricorn_PDZ
BYD3_k127_938605_1	364733.XP_007800879.1	6.723e-269	839.0	KOG2408@1|root,KOG2408@2759|Eukaryota,38C9T@33154|Opisthokonta,3NYSG@4751|Fungi,3QQHK@4890|Ascomycota,20DCW@147545|Eurotiomycetes,3MUAK@451870|Chaetothyriomycetidae	4751|Fungi	S	Animal haem peroxidase	-	-	-	-	-	-	-	-	-	-	-	-	An_peroxidase
BYD3_k127_938605_2	1117108.PAALTS15_24839	7.549e-13	70.0	COG1670@1|root,COG1670@2|Bacteria,1V5WS@1239|Firmicutes,4HH37@91061|Bacilli,26Y03@186822|Paenibacillaceae	91061|Bacilli	J	Acetyltransferase (GNAT) domain	-	-	-	-	-	-	-	-	-	-	-	-	Acetyltransf_3
BYD3_k127_980719_11	1121898.Q766_18605	2.642e-10	66.0	COG0526@1|root,COG0526@2|Bacteria,4P2YC@976|Bacteroidetes,1I8S9@117743|Flavobacteriia,2NTRQ@237|Flavobacterium	976|Bacteroidetes	CO	Redoxin	-	-	-	-	-	-	-	-	-	-	-	-	Redoxin
BYD3_k127_980719_14	1121898.Q766_18605	1.201e-05	56.0	COG0526@1|root,COG0526@2|Bacteria,4P2YC@976|Bacteroidetes,1I8S9@117743|Flavobacteriia,2NTRQ@237|Flavobacterium	976|Bacteroidetes	CO	Redoxin	-	-	-	-	-	-	-	-	-	-	-	-	Redoxin
BYD3_k127_980719_5	760192.Halhy_6372	9.269e-84	284.0	COG0321@1|root,COG0321@2|Bacteria,4NE14@976|Bacteroidetes,1INNH@117747|Sphingobacteriia	976|Bacteroidetes	H	Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate-dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate	lipB	GO:0003674,GO:0003824,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009249,GO:0009987,GO:0010467,GO:0016740,GO:0016746,GO:0016747,GO:0018065,GO:0018193,GO:0018205,GO:0019538,GO:0033819,GO:0036211,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0051604,GO:0071704,GO:1901564	2.3.1.181	ko:K03801	ko00785,ko01100,map00785,map01100	-	R07766,R07769	RC00039,RC00992,RC02867	ko00000,ko00001,ko01000	-	-	-	BPL_LplA_LipB
BYD3_k127_980719_15	1313421.JHBV01000043_gene3033	0.0002443	51.0	COG4319@1|root,COG4319@2|Bacteria,4NPHQ@976|Bacteroidetes	976|Bacteroidetes	S	ketosteroid isomerase	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_980719_9	760192.Halhy_6370	1.879e-58	208.0	COG1607@1|root,COG1607@2|Bacteria,4NERA@976|Bacteroidetes,1IS80@117747|Sphingobacteriia	976|Bacteroidetes	I	PFAM thioesterase superfamily	-	-	-	-	-	-	-	-	-	-	-	-	4HBT
BYD3_k127_980719_4	755732.Fluta_3544	1.007e-88	301.0	COG4122@1|root,COG4122@2|Bacteria,4NJV1@976|Bacteroidetes,1HYRV@117743|Flavobacteriia	976|Bacteroidetes	S	Methyltransferase domain	-	-	-	-	-	-	-	-	-	-	-	-	Methyltransf_24
BYD3_k127_980719_7	760192.Halhy_0193	1.777e-64	248.0	COG3291@1|root,COG3291@2|Bacteria	2|Bacteria	S	metallopeptidase activity	-	-	3.2.1.4,5.2.1.8	ko:K01179,ko:K03768,ko:K08738	ko00500,ko00920,ko01100,ko01120,ko01524,ko02020,ko04115,ko04210,ko04214,ko04215,ko04932,ko05010,ko05012,ko05014,ko05016,ko05134,ko05145,ko05152,ko05161,ko05164,ko05167,ko05168,ko05200,ko05210,ko05222,ko05416,map00500,map00920,map01100,map01120,map01524,map02020,map04115,map04210,map04214,map04215,map04932,map05010,map05012,map05014,map05016,map05134,map05145,map05152,map05161,map05164,map05167,map05168,map05200,map05210,map05222,map05416	M00595	R06200,R10151,R11307,R11308	RC03151,RC03152	ko00000,ko00001,ko00002,ko01000,ko03110	3.D.4.6	GH5,GH9	-	CHU_C,PKD,SprB
BYD3_k127_980719_10	760192.Halhy_0194	1.977e-19	93.0	COG2010@1|root,COG2010@2|Bacteria,4NEXP@976|Bacteroidetes,1J09E@117747|Sphingobacteriia	976|Bacteroidetes	C	Cytochrome C oxidase, cbb3-type, subunit III	nirK	-	1.7.2.1	ko:K00368,ko:K00405	ko00190,ko00910,ko01100,ko01120,ko02020,map00190,map00910,map01100,map01120,map02020	M00156,M00529	R00783,R00785	RC00086	ko00000,ko00001,ko00002,ko01000	3.D.4.3	-	-	Cu-oxidase,Cu-oxidase_3,Cytochrom_C,Cytochrome_CBB3
BYD3_k127_980719_8	760192.Halhy_1863	1.445e-60	215.0	COG1999@1|root,COG1999@2|Bacteria,4NFH2@976|Bacteroidetes,1IT0K@117747|Sphingobacteriia	976|Bacteroidetes	S	protein SCO1 SenC PrrC involved in biogenesis of respiratory and photosynthetic systems	-	-	-	ko:K07152	-	-	-	-	ko00000,ko03029	-	-	-	SCO1-SenC
BYD3_k127_980719_13	471854.Dfer_5208	3.199e-08	62.0	2EG8H@1|root,335T3@2|Bacteria,4NW8Q@976|Bacteroidetes,47S7Q@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_980719_2	1122176.KB903538_gene1509	2.826e-111	372.0	COG0415@1|root,COG0415@2|Bacteria,4NDW0@976|Bacteroidetes,1IRAI@117747|Sphingobacteriia	976|Bacteroidetes	L	DNA photolyase	phrB	-	4.1.99.3	ko:K01669	-	-	-	-	ko00000,ko01000,ko03400	-	-	-	DNA_photolyase,FAD_binding_7
BYD3_k127_980719_6	1122981.AUME01000001_gene1784	6.949e-77	263.0	COG1136@1|root,COG1136@2|Bacteria,4NGDU@976|Bacteroidetes,2FKZC@200643|Bacteroidia	976|Bacteroidetes	V	Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner	lolD	-	-	ko:K09810	ko02010,map02010	M00255	-	-	ko00000,ko00001,ko00002,ko01000,ko02000	3.A.1.125	-	-	ABC_tran
BYD3_k127_980719_1	1313421.JHBV01000041_gene3617	8.013e-130	427.0	COG0438@1|root,COG0438@2|Bacteria,4NFD3@976|Bacteroidetes,1IR1Q@117747|Sphingobacteriia	976|Bacteroidetes	M	Glycosyl transferases group 1	-	-	-	-	-	-	-	-	-	-	-	-	Glyco_trans_1_4,Glyco_trans_4_4,Glyco_transf_4
BYD3_k127_980719_3	1408433.JHXV01000038_gene2218	5.476e-95	324.0	COG0438@1|root,COG0438@2|Bacteria,4NFD3@976|Bacteroidetes,1HX3M@117743|Flavobacteriia,2PBBU@246874|Cryomorphaceae	976|Bacteroidetes	M	Glycosyl transferases group 1	-	-	-	-	-	-	-	-	-	-	-	-	Glyco_trans_1_4,Glyco_transf_4
BYD3_k127_980719_0	760192.Halhy_5567	6.444e-138	449.0	COG0108@1|root,COG0807@1|root,COG0108@2|Bacteria,COG0807@2|Bacteria,4NF6I@976|Bacteroidetes,1INQM@117747|Sphingobacteriia	976|Bacteroidetes	H	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate	ribBA	-	3.5.4.25,4.1.99.12	ko:K14652	ko00740,ko00790,ko01100,ko01110,map00740,map00790,map01100,map01110	M00125,M00840	R00425,R07281	RC00293,RC01792,RC01815,RC02504	ko00000,ko00001,ko00002,ko01000	-	-	-	DHBP_synthase,GTP_cyclohydro2
BYD3_k127_980719_12	760192.Halhy_5568	2.263e-08	57.0	COG2067@1|root,COG2067@2|Bacteria,4PN73@976|Bacteroidetes,1IYCH@117747|Sphingobacteriia	976|Bacteroidetes	I	Type IX secretion system membrane protein PorP/SprF	-	-	-	-	-	-	-	-	-	-	-	-	PorP_SprF
BYD3_k127_995250_7	760192.Halhy_5321	6.359e-46	174.0	COG4912@1|root,COG4912@2|Bacteria,4NMNG@976|Bacteroidetes,1IYRE@117747|Sphingobacteriia	976|Bacteroidetes	L	DNA alkylation repair enzyme	alkD	-	-	-	-	-	-	-	-	-	-	-	DNA_alkylation
BYD3_k127_995250_1	1122176.KB903550_gene4352	2.962e-147	477.0	COG0577@1|root,COG0577@2|Bacteria,4NEBD@976|Bacteroidetes,1IR3W@117747|Sphingobacteriia	976|Bacteroidetes	V	ABC-type antimicrobial peptide transport system, permease component	-	-	-	ko:K02004	-	M00258	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	FtsX,MacB_PCD
BYD3_k127_995250_4	1124780.ANNU01000005_gene2362	1.277e-76	266.0	COG0483@1|root,COG0483@2|Bacteria,4NI6D@976|Bacteroidetes,47K2K@768503|Cytophagia	976|Bacteroidetes	G	Inositol monophosphatase	suhB	-	3.1.3.25	ko:K01092	ko00521,ko00562,ko01100,ko04070,map00521,map00562,map01100,map04070	M00131	R01185,R01186,R01187	RC00078	ko00000,ko00001,ko00002,ko01000	-	-	-	Inositol_P
BYD3_k127_995250_5	1453498.LG45_08710	1.74e-67	234.0	COG2318@1|root,COG2318@2|Bacteria,4NMJ9@976|Bacteroidetes,1I1AG@117743|Flavobacteriia,2NU4Y@237|Flavobacterium	976|Bacteroidetes	S	Protein of unknown function (DUF1572)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1572
BYD3_k127_995250_8	880073.Calab_2564	1.048e-33	133.0	2CCSR@1|root,32RWC@2|Bacteria	2|Bacteria	S	23S rRNA-intervening sequence protein	-	-	-	-	-	-	-	-	-	-	-	-	23S_rRNA_IVP
BYD3_k127_995250_0	1122176.KB903540_gene11	2.063e-171	545.0	COG0673@1|root,COG0673@2|Bacteria,4NFMS@976|Bacteroidetes,1IREZ@117747|Sphingobacteriia	976|Bacteroidetes	S	Oxidoreductase	yisS	-	-	-	-	-	-	-	-	-	-	-	GFO_IDH_MocA,GFO_IDH_MocA_C
BYD3_k127_995250_6	760192.Halhy_6398	2.234e-51	203.0	COG2885@1|root,COG3292@1|root,COG2885@2|Bacteria,COG3292@2|Bacteria	2|Bacteria	M	chlorophyll binding	pal	-	-	ko:K03640	-	-	-	-	ko00000,ko02000	2.C.1.2	-	-	OmpA
BYD3_k127_995250_2	555500.I215_14506	1.303e-120	396.0	COG2017@1|root,COG2017@2|Bacteria,4NF5G@976|Bacteroidetes,1HZCR@117743|Flavobacteriia	976|Bacteroidetes	G	Converts alpha-aldose to the beta-anomer	-	-	5.1.3.3	ko:K01785	ko00010,ko00052,ko01100,ko01110,ko01120,ko01130,map00010,map00052,map01100,map01110,map01120,map01130	M00632	R01602,R10619	RC00563	ko00000,ko00001,ko00002,ko01000	-	-	-	Aldose_epim
BYD3_k127_995250_3	1519464.HY22_01160	5.026e-116	386.0	COG0458@1|root,COG0458@2|Bacteria	2|Bacteria	F	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity	-	-	-	-	-	-	-	-	-	-	-	-	ATP-grasp_4
BYD3_k127_995250_9	632292.Calhy_2103	1.68e-05	51.0	COG0515@1|root,COG0515@2|Bacteria,1UI46@1239|Firmicutes,25F6K@186801|Clostridia	186801|Clostridia	KLT	WG containing repeat	-	-	-	-	-	-	-	-	-	-	-	-	WG_beta_rep
BYD3_k127_99891_1	1461577.CCMH01000054_gene726	9.664e-125	402.0	COG1814@1|root,COG1814@2|Bacteria,4NE6W@976|Bacteroidetes,1HZ1U@117743|Flavobacteriia	976|Bacteroidetes	S	membrane	-	-	-	-	-	-	-	-	-	-	-	-	VIT1
BYD3_k127_99891_4	1123248.KB893314_gene3277	2.829e-81	277.0	COG0730@1|root,COG0730@2|Bacteria,4NIJ9@976|Bacteroidetes,1IRF7@117747|Sphingobacteriia	976|Bacteroidetes	S	membrane transporter protein	-	-	-	ko:K07090	-	-	-	-	ko00000	-	-	-	TauE
BYD3_k127_99891_2	1123248.KB893314_gene3278	2.581e-111	372.0	COG0303@1|root,COG0303@2|Bacteria,4NDYD@976|Bacteroidetes,1IR9R@117747|Sphingobacteriia	976|Bacteroidetes	H	MoeA C-terminal region (domain IV)	-	-	2.10.1.1	ko:K03750	ko00790,ko01100,map00790,map01100	-	R09735	RC03462	ko00000,ko00001,ko01000	-	-	-	MoCF_biosynth,MoeA_C,MoeA_N
BYD3_k127_99891_0	700598.Niako_0551	3.752e-136	440.0	COG2896@1|root,COG2896@2|Bacteria,4NFS9@976|Bacteroidetes,1IPUJ@117747|Sphingobacteriia	976|Bacteroidetes	H	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate	moaA	-	4.1.99.22,4.6.1.17	ko:K03639,ko:K20967	ko00790,ko01100,ko04122,map00790,map01100,map04122	-	R09394,R11372	RC03420,RC03425	ko00000,ko00001,ko01000	-	-	-	Fer4_12,Fer4_14,Mob_synth_C,Radical_SAM
BYD3_k127_99891_3	1089547.KB913013_gene3936	1.114e-88	299.0	COG0861@1|root,COG0861@2|Bacteria,4NFFD@976|Bacteroidetes,47MB3@768503|Cytophagia	976|Bacteroidetes	P	PFAM Integral membrane protein TerC	-	-	-	-	-	-	-	-	-	-	-	-	TerC
## 2473 queries scanned
## Total time (seconds): 6.814828395843506
## Rate: 362.89 q/s