## Fri Dec 12 22:04:37 2025
## emapper-2.1.13
## /data/anaconda3/envs/eggnog-mapper/bin/emapper.py -i /data/result/bins/wyx/qs/new/BYD3_bin.37.fa -m mmseqs --itype genome -o BYD3_bin.37 --output_dir /data/result/bins/wyx/egg/BYD3_bin.37 --cpu 32
##
#query	seed_ortholog	evalue	score	eggNOG_OGs	max_annot_lvl	COG_category	Description	Preferred_name	GOs	EC	KEGG_ko	KEGG_Pathway	KEGG_Module	KEGG_Reaction	KEGG_rclass	BRITE	KEGG_TC	CAZy	BiGG_Reaction	PFAMs
BYD3_k127_1007470_7	292563.Cyast_1101	1.3e-47	179.0	COG0500@1|root,COG2226@2|Bacteria,1GC88@1117|Cyanobacteria	1117|Cyanobacteria	Q	PFAM Methyltransferase domain	-	-	-	-	-	-	-	-	-	-	-	-	Methyltransf_11
BYD3_k127_1007470_3	1120965.AUBV01000001_gene3359	3.386e-113	374.0	COG3258@1|root,COG3258@2|Bacteria,4NGIH@976|Bacteroidetes,47PB1@768503|Cytophagia	976|Bacteroidetes	C	Cytochrome C oxidase, cbb3-type, subunit III	-	-	1.8.2.2	ko:K19713	-	-	-	-	ko00000,ko01000	-	-	-	Cytochrom_C,Cytochrome_CBB3
BYD3_k127_1007470_9	388413.ALPR1_15834	8.676e-37	146.0	COG1416@1|root,COG1416@2|Bacteria,4NUNC@976|Bacteroidetes	976|Bacteroidetes	S	PFAM DsrE DsrF-like family	-	-	-	ko:K09004	-	-	-	-	ko00000	-	-	-	DrsE
BYD3_k127_1007470_6	1123248.KB893386_gene1950	2.494e-74	256.0	COG1416@1|root,COG1416@2|Bacteria,4NH85@976|Bacteroidetes,1IX7M@117747|Sphingobacteriia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_1007470_1	555500.I215_06257	4.711e-206	650.0	COG0277@1|root,COG0277@2|Bacteria,4NHFC@976|Bacteroidetes,1HYJ4@117743|Flavobacteriia	976|Bacteroidetes	C	Berberine and berberine like	-	-	-	-	-	-	-	-	-	-	-	-	BBE,DUF805,FAD_binding_4
BYD3_k127_1007470_4	1197477.IA57_03210	8.295e-98	332.0	COG2114@1|root,COG2207@1|root,COG2114@2|Bacteria,COG2207@2|Bacteria,4NFVC@976|Bacteroidetes,1HX7J@117743|Flavobacteriia	976|Bacteroidetes	K	Protein of unknown function (DUF4242)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4242,HTH_18
BYD3_k127_1007470_2	926549.KI421517_gene4120	2.001e-193	606.0	COG4124@1|root,COG4124@2|Bacteria,4NEZG@976|Bacteroidetes,47MNT@768503|Cytophagia	976|Bacteroidetes	G	Glycosyl hydrolase family 26	-	-	3.2.1.78	ko:K01218	ko00051,ko02024,map00051,map02024	-	R01332	RC00467	ko00000,ko00001,ko01000	-	GH26	-	Glyco_hydro_26
BYD3_k127_1007470_0	1270193.JARP01000001_gene3583	7.031e-232	735.0	COG3250@1|root,COG3250@2|Bacteria,4NEDP@976|Bacteroidetes,1IMPI@117743|Flavobacteriia,2NUP4@237|Flavobacterium	976|Bacteroidetes	G	Belongs to the glycosyl hydrolase 2 family	-	-	3.1.1.53	ko:K05970	-	-	-	-	ko00000,ko01000	-	-	-	Glyco_hydro_2_N,SASA
BYD3_k127_1007470_8	1237149.C900_02751	6.327e-37	145.0	2ADSH@1|root,313I2@2|Bacteria,4NQMU@976|Bacteroidetes,47PP1@768503|Cytophagia	976|Bacteroidetes	S	TIGRFAM Gliding motility-associated lipoprotein, GldH	gldH	GO:0006022,GO:0006026,GO:0006030,GO:0006032,GO:0006040,GO:0006807,GO:0006928,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009987,GO:0017144,GO:0040011,GO:0042737,GO:0043170,GO:0044237,GO:0044248,GO:0046348,GO:0048870,GO:0051179,GO:0051674,GO:0071704,GO:0071976,GO:1901071,GO:1901072,GO:1901135,GO:1901136,GO:1901564,GO:1901565,GO:1901575	-	-	-	-	-	-	-	-	-	-	GldH_lipo
BYD3_k127_1007470_5	1237149.C900_02750	1.115e-76	260.0	COG1774@1|root,COG1774@2|Bacteria,4NENX@976|Bacteroidetes,47M8P@768503|Cytophagia	976|Bacteroidetes	S	PFAM PSP1 C-terminal conserved region	-	-	-	-	-	-	-	-	-	-	-	-	PSP1
BYD3_k127_1019827_1	1123278.KB893614_gene5318	3.34e-62	218.0	COG1132@1|root,COG1132@2|Bacteria,4NEE7@976|Bacteroidetes,47KAB@768503|Cytophagia	976|Bacteroidetes	V	ABC transporter transmembrane region	-	-	-	-	-	-	-	-	-	-	-	-	ABC_membrane,ABC_tran
BYD3_k127_1019827_0	391587.KAOT1_03262	2.856e-191	619.0	COG2274@1|root,COG2274@2|Bacteria,4NE19@976|Bacteroidetes,1HXXQ@117743|Flavobacteriia	976|Bacteroidetes	V	abc transporter (atp-binding protein)	-	-	-	ko:K20344	ko02010,ko02024,map02010,map02024	-	-	-	ko00000,ko00001,ko02000	3.A.1.112	-	-	ABC_membrane,ABC_tran,Peptidase_C39
BYD3_k127_1019827_3	761193.Runsl_4392	1.895e-17	88.0	COG0526@1|root,COG0526@2|Bacteria,4NV2M@976|Bacteroidetes,47X7E@768503|Cytophagia	976|Bacteroidetes	CO	AhpC/TSA family	-	-	-	-	-	-	-	-	-	-	-	-	AhpC-TSA,Thioredoxin_2
BYD3_k127_1019827_2	761193.Runsl_4393	1.005e-44	171.0	2C6AJ@1|root,32RGZ@2|Bacteria,4NRBU@976|Bacteroidetes,47XTN@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_1021387_4	153721.MYP_1440	5.089e-35	137.0	COG0128@1|root,COG0128@2|Bacteria,4NE8T@976|Bacteroidetes,47K1U@768503|Cytophagia	976|Bacteroidetes	E	Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate	aroA	-	2.5.1.19	ko:K00800	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	M00022	R03460	RC00350	ko00000,ko00001,ko00002,ko01000	-	-	-	EPSP_synthase
BYD3_k127_1021387_2	649349.Lbys_1928	9.801e-117	385.0	COG0337@1|root,COG0337@2|Bacteria,4NGSS@976|Bacteroidetes,47JBE@768503|Cytophagia	976|Bacteroidetes	E	Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)	aroB	-	4.2.3.4	ko:K01735	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	M00022	R03083	RC00847	ko00000,ko00001,ko00002,ko01000	-	-	-	DHQ_synthase
BYD3_k127_1021387_1	1237149.C900_01083	5.829e-159	509.0	COG0506@1|root,COG0506@2|Bacteria,4NEH5@976|Bacteroidetes,47KMP@768503|Cytophagia	976|Bacteroidetes	E	PFAM Proline dehydrogenase	putA	-	-	ko:K00318	ko00330,ko01100,ko01110,ko01130,map00330,map01100,map01110,map01130	-	R10507	RC00083	ko00000,ko00001,ko01000	-	-	-	Pro_dh
BYD3_k127_1021387_0	1237149.C900_01087	7.147e-311	958.0	COG1190@1|root,COG1190@2|Bacteria,4NDZN@976|Bacteroidetes,47M2W@768503|Cytophagia	976|Bacteroidetes	J	Belongs to the class-II aminoacyl-tRNA synthetase family	lysS	-	6.1.1.6	ko:K04567	ko00970,map00970	M00359,M00360	R03658	RC00055,RC00523	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	-	-	-	DUF4332,tRNA-synt_2,tRNA_anti-codon
BYD3_k127_1021387_3	1237149.C900_01088	6.86e-97	327.0	COG1452@1|root,COG1452@2|Bacteria,4NFWD@976|Bacteroidetes,47JIS@768503|Cytophagia	976|Bacteroidetes	M	Organic solvent tolerance protein OstA	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_1025402_4	1089547.KB913013_gene4384	1.134e-41	162.0	COG0800@1|root,COG0800@2|Bacteria,4NEFY@976|Bacteroidetes,47PM4@768503|Cytophagia	976|Bacteroidetes	G	PFAM KDPG and KHG aldolase	eda	-	4.1.2.14,4.1.3.42	ko:K01625	ko00030,ko00630,ko01100,ko01120,ko01200,map00030,map00630,map01100,map01120,map01200	M00008,M00061,M00308,M00631	R00470,R05605	RC00307,RC00308,RC00435	ko00000,ko00001,ko00002,ko01000	-	-	-	Aldolase
BYD3_k127_1025402_0	1124780.ANNU01000008_gene2665	7.53e-271	842.0	COG2721@1|root,COG2721@2|Bacteria,4NFVQ@976|Bacteroidetes,47K7S@768503|Cytophagia	976|Bacteroidetes	G	PFAM D-galactarate dehydratase Altronate hydrolase	uxaA	-	4.2.1.7	ko:K01685	ko00040,ko01100,map00040,map01100	M00631	R01540	RC00543	ko00000,ko00001,ko00002,ko01000	-	-	-	GD_AH_C,SAF
BYD3_k127_1025402_5	1121904.ARBP01000009_gene4305	4.234e-34	136.0	COG1917@1|root,COG1917@2|Bacteria	2|Bacteria	L	Cupin 2, conserved barrel domain protein	kdgF	-	-	-	-	-	-	-	-	-	-	-	Cupin_2
BYD3_k127_1025402_2	143224.JQMD01000002_gene1383	3.367e-116	383.0	COG3717@1|root,COG3717@2|Bacteria,4NDUV@976|Bacteroidetes,1HY64@117743|Flavobacteriia	976|Bacteroidetes	G	Catalyzes the isomerization of 5-dehydro-4-deoxy-D- glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate	kduI	-	5.3.1.17	ko:K01815	ko00040,map00040	-	R04383	RC00541	ko00000,ko00001,ko01000	-	-	-	KduI
BYD3_k127_1025402_1	1124780.ANNU01000008_gene2688	1.042e-139	451.0	COG1609@1|root,COG1609@2|Bacteria,4NDW6@976|Bacteroidetes,47MCC@768503|Cytophagia	976|Bacteroidetes	K	lacI family	-	-	-	ko:K02529	-	-	-	-	ko00000,ko03000	-	-	-	LacI,Peripla_BP_1,Peripla_BP_3
BYD3_k127_1025402_3	926556.Echvi_3071	5.651e-45	166.0	COG0246@1|root,COG0246@2|Bacteria,4NEMT@976|Bacteroidetes,47K47@768503|Cytophagia	976|Bacteroidetes	G	PFAM Mannitol dehydrogenase	uxaB	GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006063,GO:0006082,GO:0008150,GO:0008152,GO:0009026,GO:0009056,GO:0009987,GO:0016052,GO:0016054,GO:0016491,GO:0016614,GO:0016616,GO:0019586,GO:0019698,GO:0019752,GO:0032787,GO:0036094,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044281,GO:0044282,GO:0044424,GO:0044444,GO:0044464,GO:0046365,GO:0046395,GO:0046396,GO:0046397,GO:0048037,GO:0050662,GO:0051287,GO:0055114,GO:0071704,GO:0072329,GO:0097159,GO:1901265,GO:1901363,GO:1901575	1.1.1.17,1.1.1.58	ko:K00009,ko:K00041	ko00040,ko00051,ko01100,map00040,map00051,map01100	M00631	R02555,R02703	RC00085	ko00000,ko00001,ko00002,ko01000	-	-	-	Mannitol_dh,Mannitol_dh_C
BYD3_k127_1026000_0	1123278.KB893390_gene830	6.137e-98	323.0	COG3119@1|root,COG3119@2|Bacteria,4NFRB@976|Bacteroidetes,47TC8@768503|Cytophagia	976|Bacteroidetes	P	C-terminal region of aryl-sulfatase	-	-	-	-	-	-	-	-	-	-	-	-	Sulfatase,Sulfatase_C
BYD3_k127_1026000_1	1123278.KB893390_gene830	5.549e-95	315.0	COG3119@1|root,COG3119@2|Bacteria,4NFRB@976|Bacteroidetes,47TC8@768503|Cytophagia	976|Bacteroidetes	P	C-terminal region of aryl-sulfatase	-	-	-	-	-	-	-	-	-	-	-	-	Sulfatase,Sulfatase_C
BYD3_k127_1026000_2	1239962.C943_02385	0.000314	48.0	COG1629@1|root,COG1629@2|Bacteria,4PPUI@976|Bacteroidetes,47YSI@768503|Cytophagia	976|Bacteroidetes	P	transport	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_1033256_0	926549.KI421517_gene1441	3.458e-51	206.0	COG2373@1|root,COG2373@2|Bacteria,4NGYZ@976|Bacteroidetes,47M8I@768503|Cytophagia	976|Bacteroidetes	S	Large extracellular alpha-helical protein	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_1033256_1	929562.Emtol_3322	4.507e-27	123.0	28I8D@1|root,2ZBHJ@2|Bacteria,4NHI9@976|Bacteroidetes,47KUP@768503|Cytophagia	976|Bacteroidetes	S	Domain of unknown function (DUF4249)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4249
BYD3_k127_1050355_2	1239962.C943_03802	7.597e-53	190.0	COG4888@1|root,COG4888@2|Bacteria,4NEE8@976|Bacteroidetes,47JJ5@768503|Cytophagia	976|Bacteroidetes	S	ASPIC and UnbV	-	-	-	-	-	-	-	-	-	-	-	-	UnbV_ASPIC,VCBS
BYD3_k127_1050355_0	1121904.ARBP01000005_gene4839	4.584e-234	736.0	COG1395@1|root,COG1395@2|Bacteria,4PMSD@976|Bacteroidetes,47Y95@768503|Cytophagia	976|Bacteroidetes	K	SusD family	-	-	-	ko:K21572	-	-	-	-	ko00000,ko02000	8.A.46.1,8.A.46.3	-	-	SusD-like_3,SusD_RagB
BYD3_k127_1050355_1	1121904.ARBP01000005_gene4840	6.176e-168	535.0	COG1629@1|root,COG1629@2|Bacteria,4NDXS@976|Bacteroidetes,47KDP@768503|Cytophagia	976|Bacteroidetes	P	TonB dependent receptor	-	-	-	-	-	-	-	-	-	-	-	-	CarbopepD_reg_2,Plug,TonB_dep_Rec
BYD3_k127_1061948_1	1267533.KB906740_gene376	6.075e-57	203.0	COG2318@1|root,COG2318@2|Bacteria	2|Bacteria	S	DinB family	-	-	-	-	-	-	-	-	-	-	-	-	DUF664
BYD3_k127_1061948_0	1250232.JQNJ01000001_gene1549	6.181e-135	459.0	COG0745@1|root,COG5002@1|root,COG0745@2|Bacteria,COG5002@2|Bacteria,4P0IA@976|Bacteroidetes,1HZEZ@117743|Flavobacteriia	976|Bacteroidetes	T	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase	-	-	-	-	-	-	-	-	-	-	-	-	7TMR-DISMED2,7TMR-DISM_7TM,HATPase_c,HTH_18,HisKA,Response_reg,TPR_12,TPR_8
BYD3_k127_1092188_2	1121957.ATVL01000008_gene4099	3.158e-63	240.0	COG0457@1|root,COG4251@1|root,COG0457@2|Bacteria,COG4251@2|Bacteria,4NI29@976|Bacteroidetes,47KZN@768503|Cytophagia	976|Bacteroidetes	T	PFAM Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase	-	-	-	-	-	-	-	-	-	-	-	-	HATPase_c,HisKA,TPR_12,TPR_8
BYD3_k127_1092188_3	330214.NIDE0047	2.417e-49	182.0	COG0778@1|root,COG0778@2|Bacteria	2|Bacteria	C	coenzyme F420-1:gamma-L-glutamate ligase activity	tdsD	-	-	-	-	-	-	-	-	-	-	-	Nitroreductase
BYD3_k127_1092188_0	929556.Solca_0019	1.638e-120	392.0	COG1741@1|root,COG1741@2|Bacteria,4NN4X@976|Bacteroidetes,1J089@117747|Sphingobacteriia	976|Bacteroidetes	S	Pirin C-terminal cupin domain	-	-	-	ko:K06911	-	-	-	-	ko00000	-	-	-	Pirin,Pirin_C
BYD3_k127_1092188_1	1123248.KB893386_gene1885	4.054e-103	341.0	COG1741@1|root,COG1741@2|Bacteria,4NGJ5@976|Bacteroidetes,1IPXK@117747|Sphingobacteriia	976|Bacteroidetes	S	Belongs to the pirin family	-	-	-	ko:K06911	-	-	-	-	ko00000	-	-	-	Pirin
BYD3_k127_1092188_4	504472.Slin_0949	2.166e-14	73.0	COG1695@1|root,COG1695@2|Bacteria,4NQ31@976|Bacteroidetes,47UWR@768503|Cytophagia	976|Bacteroidetes	K	Transcriptional regulator PadR-like family	-	-	-	-	-	-	-	-	-	-	-	-	PadR
BYD3_k127_1104546_2	1237149.C900_03364	6.685e-30	129.0	COG2010@1|root,COG2010@2|Bacteria,4NFMJ@976|Bacteroidetes,47PY8@768503|Cytophagia	976|Bacteroidetes	C	TIGRFAM cytochrome c oxidase, cbb3-type, subunit III	ccoP	-	-	ko:K00406	ko00190,ko01100,ko02020,map00190,map01100,map02020	M00156	-	-	ko00000,ko00001,ko00002	3.D.4.3	-	-	Cytochrome_CBB3,FixP_N
BYD3_k127_1104546_3	1122225.AULQ01000005_gene2509	1.866e-11	73.0	COG2846@1|root,COG2846@2|Bacteria,4NE9M@976|Bacteroidetes,1HXS5@117743|Flavobacteriia	976|Bacteroidetes	D	Di-iron-containing protein involved in the repair of iron-sulfur clusters	ric	-	-	ko:K07322	-	-	-	-	ko00000	-	-	-	Hemerythrin,ScdA_N
BYD3_k127_1104546_1	760192.Halhy_3829	5.085e-126	407.0	COG0605@1|root,COG0605@2|Bacteria,4NIWF@976|Bacteroidetes,1IX0J@117747|Sphingobacteriia	976|Bacteroidetes	C	Iron/manganese superoxide dismutases, alpha-hairpin domain	-	-	1.15.1.1	ko:K04564	ko04013,ko04068,ko04146,ko04211,ko04212,ko04213,ko05016,map04013,map04068,map04146,map04211,map04212,map04213,map05016	-	-	-	ko00000,ko00001,ko01000	-	-	-	Sod_Fe_C,Sod_Fe_N
BYD3_k127_1104546_0	760192.Halhy_3830	3.39e-223	707.0	COG1629@1|root,COG4771@2|Bacteria,4NEIG@976|Bacteroidetes	976|Bacteroidetes	P	TonB-dependent receptor	-	-	-	-	-	-	-	-	-	-	-	-	CarbopepD_reg_2,CarboxypepD_reg,OMP_b-brl_3,Plug
BYD3_k127_1138039_1	929562.Emtol_1891	9.427e-95	317.0	COG1409@1|root,COG1409@2|Bacteria,4NN8T@976|Bacteroidetes,47PD0@768503|Cytophagia	976|Bacteroidetes	S	Calcineurin-like phosphoesterase	-	-	-	-	-	-	-	-	-	-	-	-	Metallophos
BYD3_k127_1138039_0	1237149.C900_02110	1.832e-104	344.0	COG0321@1|root,COG0321@2|Bacteria,4NE14@976|Bacteroidetes,47KKV@768503|Cytophagia	976|Bacteroidetes	H	Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate-dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate	lipB	GO:0003674,GO:0003824,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009249,GO:0009987,GO:0010467,GO:0016740,GO:0016746,GO:0016747,GO:0018065,GO:0018193,GO:0018205,GO:0019538,GO:0033819,GO:0036211,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0051604,GO:0071704,GO:1901564	2.3.1.181	ko:K03801	ko00785,ko01100,map00785,map01100	-	R07766,R07769	RC00039,RC00992,RC02867	ko00000,ko00001,ko01000	-	-	-	BPL_LplA_LipB
BYD3_k127_1138039_2	1237149.C900_02109	1.119e-49	179.0	2AGNU@1|root,316WB@2|Bacteria,4NSNZ@976|Bacteroidetes,47RK1@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_1138039_3	1237149.C900_02108	2.814e-18	85.0	COG3298@1|root,COG3298@2|Bacteria,4NECH@976|Bacteroidetes,47Y3D@768503|Cytophagia	976|Bacteroidetes	L	Predicted 3'-5' exonuclease related to the exonuclease domain of PolB	-	-	-	ko:K07501	-	-	-	-	ko00000	-	-	-	DNA_pol_B_exo2
BYD3_k127_1141393_7	1121904.ARBP01000003_gene6484	4.205e-97	323.0	COG0157@1|root,COG0157@2|Bacteria,4NDXF@976|Bacteroidetes,47JJ8@768503|Cytophagia	976|Bacteroidetes	H	Belongs to the NadC ModD family	nadC	-	2.4.2.19	ko:K00767	ko00760,ko01100,map00760,map01100	M00115	R03348	RC02877	ko00000,ko00001,ko00002,ko01000	-	-	-	QRPTase_C,QRPTase_N
BYD3_k127_1141393_10	1237149.C900_04492	3.225e-37	144.0	2E4SF@1|root,32ZKW@2|Bacteria,4NV4G@976|Bacteroidetes,47RXS@768503|Cytophagia	976|Bacteroidetes	S	Domain of unknown function (DUF4783)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4783
BYD3_k127_1141393_1	643867.Ftrac_2141	6.487e-246	767.0	COG0696@1|root,COG0696@2|Bacteria,4NEQT@976|Bacteroidetes,47K1F@768503|Cytophagia	976|Bacteroidetes	G	Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate	gpmI	-	5.4.2.12	ko:K15633	ko00010,ko00260,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00260,map00680,map01100,map01110,map01120,map01130,map01200,map01230	M00001,M00002,M00003	R01518	RC00536	ko00000,ko00001,ko00002,ko01000	-	-	-	Metalloenzyme,Phosphodiest,iPGM_N
BYD3_k127_1141393_2	1237149.C900_04623	3.714e-235	741.0	COG1132@1|root,COG1132@2|Bacteria,4PKCT@976|Bacteroidetes,47M5S@768503|Cytophagia	976|Bacteroidetes	V	ABC-type multidrug transport system ATPase and permease	-	-	-	ko:K11085	ko02010,map02010	-	-	-	ko00000,ko00001,ko01000,ko02000	3.A.1.106	-	-	ABC_membrane,ABC_tran
BYD3_k127_1141393_9	1123276.KB893245_gene947	4.57e-50	181.0	COG0735@1|root,COG0735@2|Bacteria,4NSES@976|Bacteroidetes,47PU3@768503|Cytophagia	976|Bacteroidetes	P	Belongs to the Fur family	zur	-	-	ko:K03711	-	-	-	-	ko00000,ko03000	-	-	-	FUR
BYD3_k127_1141393_5	1237149.C900_04621	2.957e-129	420.0	COG0861@1|root,COG0861@2|Bacteria,4NH7P@976|Bacteroidetes,47N45@768503|Cytophagia	976|Bacteroidetes	P	PFAM Integral membrane protein TerC	ygjT	-	-	ko:K05794	-	-	-	-	ko00000	-	-	-	TerC
BYD3_k127_1141393_8	388413.ALPR1_00045	1.785e-73	250.0	COG0041@1|root,COG0041@2|Bacteria,4NME9@976|Bacteroidetes,47PQS@768503|Cytophagia	976|Bacteroidetes	F	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)	purE	-	5.4.99.18	ko:K01588	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	M00048	R07405	RC01947	ko00000,ko00001,ko00002,ko01000	-	-	-	AIRC
BYD3_k127_1141393_3	1237149.C900_04618	2.186e-168	537.0	COG0026@1|root,COG0026@2|Bacteria,4NEGE@976|Bacteroidetes,47JH8@768503|Cytophagia	976|Bacteroidetes	F	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)	purK	-	6.3.4.18	ko:K01589	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	M00048	R07404	RC01927	ko00000,ko00001,ko00002,ko01000	-	-	-	ATP-grasp
BYD3_k127_1141393_4	1237149.C900_04617	8.136e-154	508.0	COG0652@1|root,COG1413@1|root,COG0652@2|Bacteria,COG1413@2|Bacteria,4PM5K@976|Bacteroidetes,47MDR@768503|Cytophagia	976|Bacteroidetes	M	Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD	-	-	5.2.1.8	ko:K03768	-	-	-	-	ko00000,ko01000,ko03110	-	-	-	HEAT,HEAT_2,Pro_isomerase
BYD3_k127_1141393_0	1237149.C900_03447	1.081e-277	870.0	COG0370@1|root,COG0370@2|Bacteria,4NEII@976|Bacteroidetes,47JEQ@768503|Cytophagia	976|Bacteroidetes	P	transporter of a GTP-driven Fe(2 ) uptake system	feoB	-	-	ko:K04759	-	-	-	-	ko00000,ko02000	9.A.8.1	-	-	FeoA,FeoB_C,FeoB_N,Gate
BYD3_k127_1141393_12	1237149.C900_03448	7.016e-25	105.0	COG1918@1|root,COG1918@2|Bacteria,4NUWI@976|Bacteroidetes,47RUN@768503|Cytophagia	976|Bacteroidetes	P	FeoA	feoA	-	-	ko:K04758	-	-	-	-	ko00000,ko02000	-	-	-	FeoA
BYD3_k127_1155849_5	1185876.BN8_05360	3.214e-63	221.0	COG0102@1|root,COG0102@2|Bacteria,4NNGA@976|Bacteroidetes,47PQ7@768503|Cytophagia	976|Bacteroidetes	J	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly	rplM	-	-	ko:K02871	ko03010,map03010	M00178,M00179	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_L13
BYD3_k127_1155849_6	866536.Belba_1874	3.96e-49	178.0	COG0103@1|root,COG0103@2|Bacteria,4NNN1@976|Bacteroidetes,47Q9B@768503|Cytophagia	976|Bacteroidetes	J	Belongs to the universal ribosomal protein uS9 family	rpsI	GO:0000462,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006139,GO:0006364,GO:0006396,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016070,GO:0016072,GO:0019538,GO:0022613,GO:0022626,GO:0022627,GO:0030490,GO:0032991,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0042254,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904	-	ko:K02996	ko03010,map03010	M00178,M00179	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_S9
BYD3_k127_1155849_3	1237149.C900_00092	2.145e-125	406.0	COG0052@1|root,COG0052@2|Bacteria,4NER0@976|Bacteroidetes,47M3D@768503|Cytophagia	976|Bacteroidetes	J	Belongs to the universal ribosomal protein uS2 family	rpsB	GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904	-	ko:K02967	ko03010,map03010	M00178,M00179	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_S2
BYD3_k127_1155849_2	1237149.C900_00090	1.79e-125	407.0	COG0264@1|root,COG0264@2|Bacteria,4NF03@976|Bacteroidetes,47M4X@768503|Cytophagia	976|Bacteroidetes	J	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome	tsf	GO:0003674,GO:0003676,GO:0003723,GO:0003746,GO:0005488,GO:0006412,GO:0006414,GO:0006518,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576	-	ko:K02357	-	-	-	-	ko00000,ko03012,ko03029	-	-	-	EF_TS
BYD3_k127_1155849_1	1121904.ARBP01000053_gene476	3.386e-169	542.0	COG1012@1|root,COG1012@2|Bacteria,4NEB7@976|Bacteroidetes,47K4A@768503|Cytophagia	976|Bacteroidetes	C	PFAM Aldehyde dehydrogenase	sad	-	1.2.1.16,1.2.1.20,1.2.1.3,1.2.1.79	ko:K00128,ko:K00135	ko00010,ko00053,ko00071,ko00250,ko00280,ko00310,ko00330,ko00340,ko00350,ko00380,ko00410,ko00561,ko00620,ko00625,ko00650,ko00760,ko00903,ko00981,ko01100,ko01110,ko01120,ko01130,map00010,map00053,map00071,map00250,map00280,map00310,map00330,map00340,map00350,map00380,map00410,map00561,map00620,map00625,map00650,map00760,map00903,map00981,map01100,map01110,map01120,map01130	M00027,M00135	R00264,R00631,R00710,R00713,R00714,R00904,R01752,R01986,R02401,R02549,R02678,R02940,R02957,R03283,R03869,R04065,R04506,R04903,R05050,R05237,R05238,R05286,R06366,R08146	RC00047,RC00071,RC00080,RC00186,RC00218,RC00242,RC00816,RC01500	ko00000,ko00001,ko00002,ko01000	-	-	-	Aldedh
BYD3_k127_1155849_7	1123277.KB893187_gene2725	9.807e-45	173.0	COG1983@1|root,COG1983@2|Bacteria,4NS0M@976|Bacteroidetes,47QMV@768503|Cytophagia	976|Bacteroidetes	KT	Putative auto-transporter adhesin, head GIN domain	-	-	-	-	-	-	-	-	-	-	-	-	DUF2807
BYD3_k127_1155849_0	929556.Solca_2890	3.327e-190	604.0	COG0534@1|root,COG0534@2|Bacteria,4NDUF@976|Bacteroidetes,1IQJT@117747|Sphingobacteriia	976|Bacteroidetes	V	Mate efflux family protein	-	-	-	ko:K03327	-	-	-	-	ko00000,ko02000	2.A.66.1	-	-	MatE
BYD3_k127_1155849_4	1313301.AUGC01000004_gene2232	1.024e-84	287.0	COG0283@1|root,COG0283@2|Bacteria,4NEMB@976|Bacteroidetes	976|Bacteroidetes	F	Belongs to the cytidylate kinase family. Type 1 subfamily	cmk	GO:0003674,GO:0003824,GO:0004127,GO:0004592,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006520,GO:0006573,GO:0006575,GO:0006725,GO:0006732,GO:0006753,GO:0006766,GO:0006767,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009081,GO:0009108,GO:0009110,GO:0009117,GO:0009123,GO:0009165,GO:0009987,GO:0015939,GO:0015940,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0016874,GO:0016879,GO:0016881,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019752,GO:0032787,GO:0033317,GO:0034641,GO:0034654,GO:0042364,GO:0042398,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0046939,GO:0046940,GO:0050145,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072330,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605	2.7.4.25	ko:K00945	ko00240,ko01100,map00240,map01100	M00052	R00158,R00512,R01665	RC00002	ko00000,ko00001,ko00002,ko01000	-	-	-	Cytidylate_kin
BYD3_k127_1155849_8	1237149.C900_02255	1.158e-22	99.0	COG1726@1|root,COG1726@2|Bacteria,4NEDQ@976|Bacteroidetes,47M23@768503|Cytophagia	976|Bacteroidetes	C	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol	nqrA	-	1.6.5.8	ko:K00346	-	-	-	-	ko00000,ko01000	-	-	-	NQRA,NQRA_SLBB
BYD3_k127_117751_0	1237149.C900_05937	9.572e-191	611.0	COG0706@1|root,COG0706@2|Bacteria,4NESJ@976|Bacteroidetes,47KF7@768503|Cytophagia	976|Bacteroidetes	U	Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins	yidC	-	-	ko:K03217	ko02024,ko03060,ko03070,map02024,map03060,map03070	M00335	-	-	ko00000,ko00001,ko00002,ko02044,ko03029	2.A.9	-	-	60KD_IMP,YidC_periplas
BYD3_k127_117751_1	1237149.C900_05936	2.073e-138	444.0	COG0504@1|root,COG0504@2|Bacteria,4NEWT@976|Bacteroidetes,47KXM@768503|Cytophagia	976|Bacteroidetes	F	Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates	pyrG	-	6.3.4.2	ko:K01937	ko00240,ko01100,map00240,map01100	M00052	R00571,R00573	RC00010,RC00074	ko00000,ko00001,ko00002,ko01000	-	-	-	CTP_synth_N,GATase
BYD3_k127_1188073_0	761193.Runsl_5024	2.664e-223	696.0	COG4948@1|root,COG4948@2|Bacteria,4NHAW@976|Bacteroidetes,47MU8@768503|Cytophagia	976|Bacteroidetes	M	Mandelate racemase / muconate lactonizing enzyme, N-terminal domain	-	-	4.2.1.6	ko:K01684	ko00052,ko01100,ko01120,map00052,map01100,map01120	M00552	R03033	RC00543	ko00000,ko00001,ko00002,ko01000	-	-	-	MR_MLE_C,MR_MLE_N
BYD3_k127_1188073_1	471854.Dfer_1017	4.511e-221	691.0	COG2271@1|root,COG2271@2|Bacteria,4NE7R@976|Bacteroidetes,47JBJ@768503|Cytophagia	976|Bacteroidetes	G	PFAM Major Facilitator Superfamily	-	-	-	ko:K08191	-	-	-	-	ko00000,ko02000	2.A.1.14.2	-	-	MFS_1
BYD3_k127_1188073_2	1237149.C900_04398	6.265e-124	407.0	COG4485@1|root,COG4485@2|Bacteria,4NEE5@976|Bacteroidetes,47ME6@768503|Cytophagia	976|Bacteroidetes	S	PFAM Bacterial membrane protein YfhO	-	-	-	-	-	-	-	-	-	-	-	-	YfhO
BYD3_k127_1197673_12	1120968.AUBX01000015_gene3598	1.002e-07	54.0	COG1195@1|root,COG1195@2|Bacteria,4NFHN@976|Bacteroidetes,47JMB@768503|Cytophagia	976|Bacteroidetes	L	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP	recF	GO:0000731,GO:0006139,GO:0006259,GO:0006281,GO:0006302,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0018130,GO:0019438,GO:0033554,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0071897,GO:0090304,GO:1901360,GO:1901362,GO:1901576	-	ko:K03629	ko03440,map03440	-	-	-	ko00000,ko00001,ko03400	-	-	-	AAA_15,SMC_N
BYD3_k127_1197673_10	1279009.ADICEAN_01897	2.181e-24	105.0	COG5512@1|root,COG5512@2|Bacteria,4NXIK@976|Bacteroidetes,47S8C@768503|Cytophagia	976|Bacteroidetes	S	Protein of unknown function (DUF721)	-	-	-	-	-	-	-	-	-	-	-	-	DUF721
BYD3_k127_1197673_15	1158294.JOMI01000009_gene919	2.569e-05	47.0	2DR8D@1|root,33ANQ@2|Bacteria,4NYGG@976|Bacteroidetes,2FVPJ@200643|Bacteroidia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_1197673_3	1239962.C943_00525	1.025e-229	714.0	COG0050@1|root,COG0050@2|Bacteria,4NEWS@976|Bacteroidetes,47JYT@768503|Cytophagia	976|Bacteroidetes	J	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis	tuf	-	-	ko:K02358	-	-	-	-	ko00000,ko03012,ko03029,ko04147	-	-	-	GTP_EFTU,GTP_EFTU_D2,GTP_EFTU_D3
BYD3_k127_1197673_11	1237149.C900_04669	1.779e-22	98.0	COG0690@1|root,COG0690@2|Bacteria,4NX53@976|Bacteroidetes,47RVC@768503|Cytophagia	976|Bacteroidetes	U	Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation	secE	-	-	ko:K03073	ko02024,ko03060,ko03070,map02024,map03060,map03070	M00335	-	-	ko00000,ko00001,ko00002,ko02044	3.A.5.1,3.A.5.2	-	-	SecE
BYD3_k127_1197673_5	1237149.C900_04670	7.779e-105	342.0	COG0250@1|root,COG0250@2|Bacteria,4NF2X@976|Bacteroidetes,47KBF@768503|Cytophagia	976|Bacteroidetes	K	Participates in transcription elongation, termination and antitermination	nusG	-	-	ko:K02601	-	-	-	-	ko00000,ko03009,ko03021	-	-	-	KOW,NusG
BYD3_k127_1197673_6	1237149.C900_04671	1.397e-78	263.0	COG0080@1|root,COG0080@2|Bacteria,4NM60@976|Bacteroidetes,47PEZ@768503|Cytophagia	976|Bacteroidetes	J	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors	rplK	GO:0000027,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904	-	ko:K02867	ko03010,map03010	M00178,M00179	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_L11,Ribosomal_L11_N
BYD3_k127_1197673_4	153721.MYP_4168	4.146e-111	363.0	COG0081@1|root,COG0081@2|Bacteria,4NEIC@976|Bacteroidetes,47JJZ@768503|Cytophagia	976|Bacteroidetes	J	Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release	rplA	GO:0000470,GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006139,GO:0006364,GO:0006396,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016070,GO:0016072,GO:0019538,GO:0022613,GO:0022625,GO:0022626,GO:0032991,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0042254,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904	-	ko:K02863	ko03010,map03010	M00178,M00179	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_L1
BYD3_k127_1197673_7	1237149.C900_04673	1.318e-65	228.0	COG0244@1|root,COG0244@2|Bacteria,4NFFK@976|Bacteroidetes,47JGP@768503|Cytophagia	976|Bacteroidetes	J	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors	rplJ	-	-	ko:K02864	ko03010,map03010	M00178,M00179	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_L10
BYD3_k127_1197673_8	1121481.AUAS01000013_gene4199	1.021e-49	179.0	COG0222@1|root,COG0222@2|Bacteria,4NQAQ@976|Bacteroidetes,47PSQ@768503|Cytophagia	976|Bacteroidetes	J	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation	rplL	-	-	ko:K02935	ko03010,map03010	M00178	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_L12,Ribosomal_L12_N
BYD3_k127_1197673_0	1237149.C900_04675	0.0	2256.0	COG0085@1|root,COG0085@2|Bacteria,4NF8D@976|Bacteroidetes,47JXH@768503|Cytophagia	976|Bacteroidetes	K	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates	rpoB	GO:0000428,GO:0005575,GO:0005622,GO:0005623,GO:0030880,GO:0032991,GO:0044424,GO:0044464,GO:0061695,GO:1902494,GO:1990234	2.7.7.6	ko:K03043	ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020	M00183	R00435,R00441,R00442,R00443	RC02795	br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400	-	-	-	RNA_pol_Rpb2_1,RNA_pol_Rpb2_2,RNA_pol_Rpb2_3,RNA_pol_Rpb2_45,RNA_pol_Rpb2_6,RNA_pol_Rpb2_7
BYD3_k127_1197673_1	1237149.C900_04676	0.0	1612.0	COG0086@1|root,COG0086@2|Bacteria,4NEMW@976|Bacteroidetes,47JP0@768503|Cytophagia	976|Bacteroidetes	K	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates	rpoC	GO:0000428,GO:0005575,GO:0005622,GO:0005623,GO:0030880,GO:0032991,GO:0044424,GO:0044464,GO:0061695,GO:1902494,GO:1990234	2.7.7.6	ko:K03046	ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020	M00183	R00435,R00441,R00442,R00443	RC02795	br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400	-	-	-	RNA_pol_Rpb1_1,RNA_pol_Rpb1_2,RNA_pol_Rpb1_3,RNA_pol_Rpb1_4,RNA_pol_Rpb1_5
BYD3_k127_1197673_2	1237149.C900_04676	5.564e-290	896.0	COG0086@1|root,COG0086@2|Bacteria,4NEMW@976|Bacteroidetes,47JP0@768503|Cytophagia	976|Bacteroidetes	K	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates	rpoC	GO:0000428,GO:0005575,GO:0005622,GO:0005623,GO:0030880,GO:0032991,GO:0044424,GO:0044464,GO:0061695,GO:1902494,GO:1990234	2.7.7.6	ko:K03046	ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020	M00183	R00435,R00441,R00442,R00443	RC02795	br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400	-	-	-	RNA_pol_Rpb1_1,RNA_pol_Rpb1_2,RNA_pol_Rpb1_3,RNA_pol_Rpb1_4,RNA_pol_Rpb1_5
BYD3_k127_1197673_9	1237149.C900_04677	1.826e-33	130.0	COG4191@1|root,COG4191@2|Bacteria,4NSNP@976|Bacteroidetes,47R37@768503|Cytophagia	976|Bacteroidetes	T	Protein of unknown function (DUF3467)	-	-	-	-	-	-	-	-	-	-	-	-	DUF3467
BYD3_k127_1200656_0	1123248.KB893386_gene1917	0.0	1057.0	COG0474@1|root,COG0474@2|Bacteria,4NERM@976|Bacteroidetes,1IR88@117747|Sphingobacteriia	976|Bacteroidetes	P	TIGRFAM ATPase, P-type, K Mg Cd Cu Zn Na Ca Na H-transporter	-	-	3.6.3.8	ko:K01537	-	-	-	-	ko00000,ko01000	3.A.3.2	-	-	Cation_ATPase,Cation_ATPase_C,Cation_ATPase_N,E1-E2_ATPase,Hydrolase,Hydrolase_3
BYD3_k127_1200656_9	991.IW20_08275	1.106e-70	248.0	2C804@1|root,32VPI@2|Bacteria	2|Bacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	Asp_protease_2
BYD3_k127_1200656_13	616991.JPOO01000001_gene4468	1.969e-38	149.0	COG3603@1|root,COG3603@2|Bacteria	2|Bacteria	S	ACT domain	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_1200656_2	1123248.KB893328_gene933	6.408e-155	501.0	COG0657@1|root,COG0657@2|Bacteria,4NIQ0@976|Bacteroidetes	976|Bacteroidetes	I	esterase	-	-	-	-	-	-	-	-	-	-	-	-	Abhydrolase_3,Peptidase_S9
BYD3_k127_1200656_10	700598.Niako_4637	2.432e-66	233.0	2CYFR@1|root,32T44@2|Bacteria,4P6IN@976|Bacteroidetes,1IZDY@117747|Sphingobacteriia	976|Bacteroidetes	S	Protein of unknown function (DUF998)	-	-	-	-	-	-	-	-	-	-	-	-	DUF998
BYD3_k127_1200656_7	1237149.C900_02151	6.855e-82	279.0	COG2823@1|root,COG2823@2|Bacteria,4NJ6H@976|Bacteroidetes,47UYC@768503|Cytophagia	976|Bacteroidetes	S	bacterial OsmY and nodulation domain	-	-	-	-	-	-	-	-	-	-	-	-	BON
BYD3_k127_1200656_14	1237149.C900_02153	2.135e-30	124.0	COG1544@1|root,COG1544@2|Bacteria	2|Bacteria	J	regulation of translation	hpf	-	-	ko:K03733,ko:K05808,ko:K05809	-	-	-	-	ko00000,ko03009,ko03036	-	-	-	Ribosom_S30AE_C,Ribosomal_S30AE
BYD3_k127_1200656_6	1237149.C900_03081	1.048e-89	301.0	COG0500@1|root,COG2226@2|Bacteria,4NPPQ@976|Bacteroidetes,47VKM@768503|Cytophagia	976|Bacteroidetes	Q	Methyltransferase domain	-	-	-	-	-	-	-	-	-	-	-	-	Methyltransf_11,Methyltransf_23
BYD3_k127_1200656_4	1469245.JFBG01000030_gene1548	2.99e-133	448.0	COG0171@1|root,COG0388@1|root,COG0171@2|Bacteria,COG0388@2|Bacteria,1MU9U@1224|Proteobacteria,1RNKA@1236|Gammaproteobacteria,1WWS1@135613|Chromatiales	135613|Chromatiales	H	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source	nadE	-	6.3.5.1	ko:K01950	ko00760,ko01100,map00760,map01100	M00115	R00257	RC00010,RC00100	ko00000,ko00001,ko00002,ko01000	-	-	-	CN_hydrolase,NAD_synthase
BYD3_k127_1200656_11	1237149.C900_02423	2.54e-56	203.0	COG0782@1|root,COG0782@2|Bacteria,4PPAB@976|Bacteroidetes	976|Bacteroidetes	K	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_1200656_3	1237149.C900_02422	1.597e-135	438.0	COG0462@1|root,COG0462@2|Bacteria,4NJ7E@976|Bacteroidetes,47UHS@768503|Cytophagia	976|Bacteroidetes	EF	Phosphoribosyl synthetase-associated domain	-	-	2.7.6.1	ko:K00948	ko00030,ko00230,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00230,map01100,map01110,map01120,map01130,map01200,map01230	M00005	R01049	RC00002,RC00078	ko00000,ko00001,ko00002,ko01000	-	-	-	Pribosyl_synth,Pribosyltran_N
BYD3_k127_1200656_5	1237149.C900_02421	1.71e-120	396.0	COG2187@1|root,COG2187@2|Bacteria,4P2MP@976|Bacteroidetes,47UQI@768503|Cytophagia	976|Bacteroidetes	S	AAA domain	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_1200656_8	1123057.P872_07665	3.037e-74	255.0	COG1073@1|root,COG1073@2|Bacteria,4NMFG@976|Bacteroidetes,47QYJ@768503|Cytophagia	976|Bacteroidetes	S	Dienelactone hydrolase family	-	-	-	-	-	-	-	-	-	-	-	-	DLH
BYD3_k127_1200656_12	1237149.C900_03078	2.224e-53	194.0	COG4978@1|root,COG4978@2|Bacteria	2|Bacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	GyrI-like
BYD3_k127_1200656_15	1237149.C900_03071	1.262e-24	105.0	COG0236@1|root,COG0236@2|Bacteria,4NWTZ@976|Bacteroidetes,47X2T@768503|Cytophagia	976|Bacteroidetes	IQ	Phosphopantetheine attachment site	-	-	-	-	-	-	-	-	-	-	-	-	PP-binding
BYD3_k127_1200656_1	1237149.C900_03072	2.192e-163	522.0	COG0508@1|root,COG0508@2|Bacteria,4NE41@976|Bacteroidetes,47TKM@768503|Cytophagia	976|Bacteroidetes	C	e3 binding domain	-	-	2.3.1.12	ko:K00627	ko00010,ko00020,ko00620,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00020,map00620,map01100,map01110,map01120,map01130,map01200	M00307	R00209,R02569	RC00004,RC02742,RC02857	br01601,ko00000,ko00001,ko00002,ko01000	-	-	-	2-oxoacid_dh,Biotin_lipoyl,E3_binding
BYD3_k127_1204685_1	1237149.C900_01776	3.936e-318	985.0	COG0403@1|root,COG1003@1|root,COG0403@2|Bacteria,COG1003@2|Bacteria,4NEDE@976|Bacteroidetes,47K29@768503|Cytophagia	976|Bacteroidetes	E	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor	gcvP	-	1.4.4.2	ko:K00281,ko:K00283	ko00260,ko00630,ko01100,ko01110,ko01130,ko01200,map00260,map00630,map01100,map01110,map01130,map01200	M00532	R01221,R03425	RC00022,RC00929,RC02834,RC02880	ko00000,ko00001,ko00002,ko01000	-	-	-	Aminotran_5,GDC-P
BYD3_k127_1204685_3	1237149.C900_01775	2.91e-153	500.0	COG2234@1|root,COG2234@2|Bacteria,4NFDJ@976|Bacteroidetes,47M5P@768503|Cytophagia	976|Bacteroidetes	S	Peptidase family M28	-	-	-	-	-	-	-	-	-	-	-	-	PA,Peptidase_M28
BYD3_k127_1204685_4	1237149.C900_02746	2.827e-150	482.0	COG0836@1|root,COG0836@2|Bacteria,4NE1Y@976|Bacteroidetes,47KJZ@768503|Cytophagia	976|Bacteroidetes	M	TIGRFAM mannose-1-phosphate guanylyltransferase mannose-6-phosphate isomerase	manC	-	2.7.7.13	ko:K00971	ko00051,ko00520,ko01100,ko01110,map00051,map00520,map01100,map01110	M00114,M00361,M00362	R00885	RC00002	ko00000,ko00001,ko00002,ko01000	-	-	-	NTP_transferase
BYD3_k127_1204685_5	1123057.P872_07235	1.953e-141	457.0	COG0517@1|root,COG0794@1|root,COG0517@2|Bacteria,COG0794@2|Bacteria,4NED8@976|Bacteroidetes,47KGF@768503|Cytophagia	976|Bacteroidetes	M	Belongs to the SIS family. GutQ KpsF subfamily	kdsD	-	5.3.1.13	ko:K06041	ko00540,ko01100,map00540,map01100	M00063	R01530	RC00541	ko00000,ko00001,ko00002,ko01000,ko01005	-	-	-	CBS,SIS
BYD3_k127_1204685_0	1237149.C900_02748	0.0	1143.0	COG0514@1|root,COG0514@2|Bacteria,4NEB4@976|Bacteroidetes,47JD8@768503|Cytophagia	976|Bacteroidetes	L	ATP-dependent DNA helicase RecQ	recQ	-	3.6.4.12	ko:K03654	ko03018,map03018	-	-	-	ko00000,ko00001,ko01000,ko03400	-	-	-	DEAD,HRDC,Helicase_C,RQC,RecQ_Zn_bind
BYD3_k127_1204685_2	1237149.C900_02749	1.496e-168	541.0	COG0151@1|root,COG0151@2|Bacteria,4NEUN@976|Bacteroidetes,47JIA@768503|Cytophagia	976|Bacteroidetes	F	Belongs to the GARS family	purD	-	6.3.4.13	ko:K01945	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	M00048	R04144	RC00090,RC00166	ko00000,ko00001,ko00002,ko01000	-	-	-	GARS_A,GARS_C,GARS_N
BYD3_k127_1204685_6	1237149.C900_02750	8.603e-26	107.0	COG1774@1|root,COG1774@2|Bacteria,4NENX@976|Bacteroidetes,47M8P@768503|Cytophagia	976|Bacteroidetes	S	PFAM PSP1 C-terminal conserved region	-	-	-	-	-	-	-	-	-	-	-	-	PSP1
BYD3_k127_1214057_1	714943.Mucpa_4144	6.625e-186	593.0	COG0513@1|root,COG0513@2|Bacteria,4NEJV@976|Bacteroidetes,1IQEP@117747|Sphingobacteriia	976|Bacteroidetes	L	Belongs to the DEAD box helicase family	deaD	-	3.6.4.13	ko:K05592	ko03018,map03018	-	-	-	ko00000,ko00001,ko01000,ko03009,ko03019	-	-	-	DEAD,DbpA,Helicase_C
BYD3_k127_1214057_4	1121887.AUDK01000004_gene387	9.381e-65	224.0	COG1943@1|root,COG1943@2|Bacteria,4NNFK@976|Bacteroidetes,1I3JQ@117743|Flavobacteriia,2NW3E@237|Flavobacterium	976|Bacteroidetes	L	Transposase IS200 like	-	-	-	-	-	-	-	-	-	-	-	-	Y1_Tnp
BYD3_k127_1214057_0	509635.N824_23560	3.89e-220	690.0	COG0673@1|root,COG0673@2|Bacteria,4NHDS@976|Bacteroidetes,1IVBU@117747|Sphingobacteriia	976|Bacteroidetes	S	Oxidoreductase family, NAD-binding Rossmann fold	-	-	-	-	-	-	-	-	-	-	-	-	GFO_IDH_MocA,GFO_IDH_MocA_C
BYD3_k127_1214057_3	509635.N824_23570	1.892e-108	361.0	COG3828@1|root,COG3828@2|Bacteria,4PNCT@976|Bacteroidetes,1J0QM@117747|Sphingobacteriia	976|Bacteroidetes	S	Methane oxygenase PmoA	-	-	-	-	-	-	-	-	-	-	-	-	PmoA
BYD3_k127_1214057_2	1121904.ARBP01000002_gene7112	3.998e-132	435.0	COG1629@1|root,COG4771@2|Bacteria,4P1Z5@976|Bacteroidetes,47JHW@768503|Cytophagia	976|Bacteroidetes	P	PFAM TonB-dependent Receptor Plug	-	-	-	-	-	-	-	-	-	-	-	-	CarbopepD_reg_2,Plug,TonB_dep_Rec
BYD3_k127_1223686_1	1237149.C900_04538	1.403e-64	238.0	28I1Q@1|root,2Z869@2|Bacteria,4NH2E@976|Bacteroidetes,47M2D@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_1223686_2	1122605.KB893637_gene3141	6.986e-32	130.0	2E32R@1|root,32Y2Y@2|Bacteria,4NVIY@976|Bacteroidetes,1IU4T@117747|Sphingobacteriia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_1223686_0	929703.KE386491_gene2374	2.029e-311	960.0	COG2303@1|root,COG2303@2|Bacteria,4NEF2@976|Bacteroidetes,47KNK@768503|Cytophagia	976|Bacteroidetes	E	Choline dehydrogenase and related	-	-	-	-	-	-	-	-	-	-	-	-	GMC_oxred_C,GMC_oxred_N
BYD3_k127_1223686_3	1123248.KB893317_gene4299	1.333e-16	83.0	2CDAN@1|root,309X8@2|Bacteria,4NP84@976|Bacteroidetes,1IUB9@117747|Sphingobacteriia	976|Bacteroidetes	S	Gluconate 2-dehydrogenase subunit 3	-	-	-	-	-	-	-	-	-	-	-	-	Gluconate_2-dh3
BYD3_k127_1235572_2	504472.Slin_5187	0.0003852	45.0	COG1196@1|root,COG4219@1|root,COG1196@2|Bacteria,COG4219@2|Bacteria,4NKKC@976|Bacteroidetes,47JQV@768503|Cytophagia	976|Bacteroidetes	KT	PFAM Peptidase M56, BlaR1	-	-	-	-	-	-	-	-	-	-	-	-	Peptidase_M56
BYD3_k127_1235572_1	1122621.ATZA01000056_gene4066	6.815e-35	138.0	COG3682@1|root,COG3682@2|Bacteria,4NSQR@976|Bacteroidetes,1ISTV@117747|Sphingobacteriia	976|Bacteroidetes	K	Transcriptional repressor, CopY family	-	-	-	-	-	-	-	-	-	-	-	-	Penicillinase_R
BYD3_k127_1235572_0	1237149.C900_05882	0.0	1339.0	COG0542@1|root,COG0542@2|Bacteria,4NGEM@976|Bacteroidetes,47KA7@768503|Cytophagia	976|Bacteroidetes	O	Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE	clpB	-	-	ko:K03695	ko04213,map04213	-	-	-	ko00000,ko00001,ko03110	-	-	-	AAA,AAA_2,ClpB_D2-small,Clp_N
BYD3_k127_1242598_2	1237149.C900_03187	1.208e-56	201.0	COG0526@1|root,COG0526@2|Bacteria,4NQ9U@976|Bacteroidetes,47RGU@768503|Cytophagia	976|Bacteroidetes	CO	Thioredoxin	trxC	-	-	-	-	-	-	-	-	-	-	-	AhpC-TSA,Thioredoxin,Thioredoxin_8
BYD3_k127_1242598_1	1237149.C900_03189	8.895e-135	435.0	COG2070@1|root,COG2070@2|Bacteria,4NF8Z@976|Bacteroidetes,47MJV@768503|Cytophagia	976|Bacteroidetes	S	Nitronate monooxygenase	fabK	-	1.3.1.9	ko:K02371	ko00061,ko01100,ko01212,map00061,map01100,map01212	M00083	R04429,R04724,R04955,R04958,R04961,R04966,R04969,R07765	RC00052,RC00076	ko00000,ko00001,ko00002,ko01000,ko01004	-	-	-	NMO
BYD3_k127_1242598_3	1237149.C900_03190	5.722e-51	183.0	COG0346@1|root,COG0346@2|Bacteria,4NRSZ@976|Bacteroidetes,47QSC@768503|Cytophagia	976|Bacteroidetes	E	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily	-	-	-	-	-	-	-	-	-	-	-	-	Glyoxalase
BYD3_k127_1242598_0	1237149.C900_04535	7.129e-296	919.0	COG1200@1|root,COG1200@2|Bacteria,4NDZV@976|Bacteroidetes,47JUE@768503|Cytophagia	976|Bacteroidetes	L	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)	recG	-	3.6.4.12	ko:K03655	ko03440,map03440	-	-	-	ko00000,ko00001,ko01000,ko03400	-	-	-	DEAD,Helicase_C,RecG_wedge
BYD3_k127_1255346_4	1237149.C900_03951	6.336e-19	86.0	COG1695@1|root,COG1695@2|Bacteria,4NQJP@976|Bacteroidetes,47QWB@768503|Cytophagia	976|Bacteroidetes	K	Transcriptional regulator PadR-like family	-	-	-	-	-	-	-	-	-	-	-	-	PadR
BYD3_k127_1255346_3	1123277.KB893239_gene1246	3.602e-34	146.0	28I8D@1|root,2ZBHJ@2|Bacteria,4NHI9@976|Bacteroidetes,47KUP@768503|Cytophagia	976|Bacteroidetes	S	Domain of unknown function (DUF4249)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4249
BYD3_k127_1255346_1	388413.ALPR1_05690	1.337e-110	362.0	COG2041@1|root,COG2041@2|Bacteria,4NK0M@976|Bacteroidetes,47P5T@768503|Cytophagia	976|Bacteroidetes	S	Oxidoreductase molybdopterin binding domain	-	-	-	ko:K07147	-	-	-	-	ko00000,ko01000	-	-	-	Oxidored_molyb
BYD3_k127_1255346_2	388413.ALPR1_05685	4.658e-87	294.0	COG4117@1|root,COG4117@2|Bacteria,4NG6M@976|Bacteroidetes,47NBT@768503|Cytophagia	976|Bacteroidetes	C	Prokaryotic cytochrome b561	-	-	-	-	-	-	-	-	-	-	-	-	Ni_hydr_CYTB,Oxidored_molyb
BYD3_k127_1255346_0	1123057.P872_07620	1.355e-142	459.0	COG2010@1|root,COG2010@2|Bacteria,4NMGT@976|Bacteroidetes,47TXQ@768503|Cytophagia	976|Bacteroidetes	C	Cytochrome c	-	-	-	-	-	-	-	-	-	-	-	-	Cytochrom_C
BYD3_k127_1262093_4	1237149.C900_01077	1.325e-55	200.0	COG0642@1|root,COG2205@2|Bacteria,4NX2D@976|Bacteroidetes,47T5N@768503|Cytophagia	976|Bacteroidetes	T	Domain of unknown function (DUF4154)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4154
BYD3_k127_1262093_1	1237149.C900_01074	2.838e-180	569.0	COG1363@1|root,COG1363@2|Bacteria,4NG97@976|Bacteroidetes,47MIG@768503|Cytophagia	976|Bacteroidetes	G	PFAM M42 glutamyl aminopeptidase	frvX	-	-	-	-	-	-	-	-	-	-	-	Peptidase_M42
BYD3_k127_1262093_0	1237149.C900_01071	8.978e-289	891.0	COG4799@1|root,COG4799@2|Bacteria,4NEMJ@976|Bacteroidetes,47K3E@768503|Cytophagia	976|Bacteroidetes	I	Acetyl-CoA carboxylase carboxyltransferase component (subunits alpha and beta)	pccB	-	2.1.3.15,6.4.1.3	ko:K01966	ko00280,ko00630,ko00640,ko01100,ko01120,ko01130,ko01200,map00280,map00630,map00640,map01100,map01120,map01130,map01200	M00373,M00741	R01859	RC00097,RC00609	ko00000,ko00001,ko00002,ko01000	-	-	-	Carboxyl_trans
BYD3_k127_1262093_3	1237149.C900_01070	9.936e-93	314.0	COG0248@1|root,COG0248@2|Bacteria,4NH03@976|Bacteroidetes,47K3H@768503|Cytophagia	976|Bacteroidetes	FP	Ppx GppA phosphatase	-	-	3.6.1.11,3.6.1.40	ko:K01524	ko00230,map00230	-	R03409	RC00002	ko00000,ko00001,ko01000	-	-	-	Ppx-GppA
BYD3_k127_1262093_2	153721.MYP_4781	2.647e-173	550.0	COG2055@1|root,COG2055@2|Bacteria,4NGVC@976|Bacteroidetes,47KBZ@768503|Cytophagia	976|Bacteroidetes	C	Belongs to the LDH2 MDH2 oxidoreductase family	-	-	-	-	-	-	-	-	-	-	-	-	Ldh_2
BYD3_k127_1318596_3	1349822.NSB1T_04795	3.388e-127	415.0	COG0079@1|root,COG0079@2|Bacteria,4NEDI@976|Bacteroidetes,2FMFQ@200643|Bacteroidia,22WB3@171551|Porphyromonadaceae	976|Bacteroidetes	E	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily	hisC	-	2.6.1.9	ko:K00817	ko00340,ko00350,ko00360,ko00400,ko00401,ko00960,ko01100,ko01110,ko01130,ko01230,map00340,map00350,map00360,map00400,map00401,map00960,map01100,map01110,map01130,map01230	M00026	R00694,R00734,R03243	RC00006,RC00888	ko00000,ko00001,ko00002,ko01000,ko01007	-	-	-	Aminotran_1_2
BYD3_k127_1318596_2	1237149.C900_03326	4.038e-160	516.0	COG0141@1|root,COG0141@2|Bacteria,4NFPZ@976|Bacteroidetes,47JSY@768503|Cytophagia	976|Bacteroidetes	E	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine	hisD	GO:0000105,GO:0003674,GO:0003824,GO:0004399,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0052803,GO:0055114,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607	1.1.1.23	ko:K00013	ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230	M00026	R01158,R01163,R03012	RC00099,RC00242,RC00463	ko00000,ko00001,ko00002,ko01000	-	-	-	Histidinol_dh
BYD3_k127_1318596_4	1237149.C900_03327	6.595e-125	405.0	COG0040@1|root,COG0040@2|Bacteria,4NDW8@976|Bacteroidetes,47M8W@768503|Cytophagia	976|Bacteroidetes	E	ATP phosphoribosyltransferase	hisG	GO:0000105,GO:0003674,GO:0003824,GO:0003879,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016740,GO:0016757,GO:0016763,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607	2.4.2.17	ko:K00765	ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230	M00026	R01071	RC02819,RC03200	ko00000,ko00001,ko00002,ko01000	-	-	-	HisG,HisG_C
BYD3_k127_1318596_7	1237149.C900_02502	2.081e-65	236.0	COG0457@1|root,COG0457@2|Bacteria,4NJ1F@976|Bacteroidetes,47NCH@768503|Cytophagia	976|Bacteroidetes	S	PFAM Tetratricopeptide repeat	-	-	-	-	-	-	-	-	-	-	-	-	TPR_1,TPR_11,TPR_16,TPR_2,TPR_8
BYD3_k127_1318596_9	1123057.P872_08345	4.819e-46	173.0	COG0494@1|root,COG0494@2|Bacteria,4NM6C@976|Bacteroidetes,47MQZ@768503|Cytophagia	976|Bacteroidetes	L	pfam nudix	-	-	-	-	-	-	-	-	-	-	-	-	NUDIX
BYD3_k127_1318596_5	1237149.C900_02073	3.969e-78	264.0	COG1528@1|root,COG1528@2|Bacteria,4NGS7@976|Bacteroidetes,47Q0N@768503|Cytophagia	976|Bacteroidetes	P	Iron-storage protein	ftnA	-	1.16.3.2	ko:K02217	-	-	-	-	ko00000,ko01000	-	-	-	Ferritin
BYD3_k127_1318596_8	1121904.ARBP01000011_gene1491	1.449e-52	193.0	COG2197@1|root,COG2197@2|Bacteria,4NN2R@976|Bacteroidetes,47W05@768503|Cytophagia	976|Bacteroidetes	T	helix_turn_helix, Lux Regulon	narL	-	-	-	-	-	-	-	-	-	-	-	GerE,Response_reg
BYD3_k127_1318596_6	929556.Solca_1319	7.326e-67	235.0	COG1266@1|root,COG1266@2|Bacteria,4NPEG@976|Bacteroidetes,1IUFC@117747|Sphingobacteriia	976|Bacteroidetes	S	CAAX protease self-immunity	-	-	-	ko:K07052	-	-	-	-	ko00000	-	-	-	Abi
BYD3_k127_1318596_1	760192.Halhy_3765	5.76e-174	552.0	COG0457@1|root,COG0457@2|Bacteria,4NEYK@976|Bacteroidetes,1IVUJ@117747|Sphingobacteriia	976|Bacteroidetes	S	Protein of unknown function (DUF2911)	-	-	-	-	-	-	-	-	-	-	-	-	DUF2911
BYD3_k127_1318596_0	1237149.C900_03056	0.0	1282.0	COG1048@1|root,COG1048@2|Bacteria,4NDZT@976|Bacteroidetes,47KF9@768503|Cytophagia	976|Bacteroidetes	C	aconitate hydratase	acnA	-	4.2.1.3	ko:K01681	ko00020,ko00630,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01210,ko01230,map00020,map00630,map00720,map01100,map01110,map01120,map01130,map01200,map01210,map01230	M00009,M00010,M00012,M00173,M00740	R01324,R01325,R01900	RC00497,RC00498,RC00618	br01601,ko00000,ko00001,ko00002,ko01000	-	-	-	Aconitase,Aconitase_C
BYD3_k127_1318596_11	468059.AUHA01000006_gene3041	2.757e-32	132.0	COG1846@1|root,COG1846@2|Bacteria,4NQ5T@976|Bacteroidetes,1IT21@117747|Sphingobacteriia	976|Bacteroidetes	K	Transcriptional regulator	-	-	-	-	-	-	-	-	-	-	-	-	MarR,MarR_2
BYD3_k127_1318596_10	1237149.C900_00316	4.558e-34	132.0	COG0302@1|root,COG0302@2|Bacteria,4NFC2@976|Bacteroidetes,47MMS@768503|Cytophagia	976|Bacteroidetes	H	TIGRFAM GTP cyclohydrolase I	folE	-	3.5.4.16	ko:K01495	ko00790,ko01100,map00790,map01100	M00126,M00841,M00842,M00843	R00428,R04639,R05046,R05048	RC00263,RC00294,RC00323,RC00945,RC01188	ko00000,ko00001,ko00002,ko01000	-	-	-	GTP_cyclohydroI
BYD3_k127_1322714_1	1237149.C900_00369	9.873e-169	537.0	COG1104@1|root,COG1104@2|Bacteria,4NFF6@976|Bacteroidetes,47MAZ@768503|Cytophagia	976|Bacteroidetes	E	PFAM aminotransferase class V	iscS	-	2.8.1.7	ko:K04487	ko00730,ko01100,ko04122,map00730,map01100,map04122	-	R07460,R11528,R11529	RC01789,RC02313	ko00000,ko00001,ko01000,ko02048,ko03016,ko03029	-	-	-	Aminotran_5
BYD3_k127_1322714_0	1120966.AUBU01000006_gene3433	1.427e-219	689.0	COG1109@1|root,COG1109@2|Bacteria,4NG3H@976|Bacteroidetes,47KR9@768503|Cytophagia	976|Bacteroidetes	G	Phosphoglucomutase phosphomannomutase alpha beta alpha domain I	glmM	-	5.4.2.8	ko:K01840	ko00051,ko00520,ko01100,ko01110,ko01130,map00051,map00520,map01100,map01110,map01130	M00114	R01818	RC00408	ko00000,ko00001,ko00002,ko01000	-	-	-	PGM_PMM_I,PGM_PMM_II,PGM_PMM_III,PGM_PMM_IV
BYD3_k127_1322714_3	1120965.AUBV01000008_gene2105	7.935e-23	99.0	2E5GR@1|root,3308C@2|Bacteria,4NUPC@976|Bacteroidetes,47S69@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_1322714_2	1237149.C900_00373	1.834e-128	415.0	COG1694@1|root,COG3956@2|Bacteria,4NEA3@976|Bacteroidetes,47K4M@768503|Cytophagia	976|Bacteroidetes	S	PFAM MazG nucleotide pyrophosphohydrolase	mazG	-	3.6.1.66	ko:K02428	ko00230,map00230	-	R00426,R00720,R01855,R02100,R02720,R03531	RC00002	ko00000,ko00001,ko01000	-	-	-	MazG
BYD3_k127_1322714_4	1121440.AUMA01000005_gene2674	1.369e-05	49.0	COG5658@1|root,COG5658@2|Bacteria	2|Bacteria	S	integral membrane protein	yfhL	-	-	-	-	-	-	-	-	-	-	-	DUF1648,SdpI
BYD3_k127_1345512_3	929703.KE386491_gene1721	2.111e-155	503.0	COG0577@1|root,COG0577@2|Bacteria,4NDUK@976|Bacteroidetes,47JJN@768503|Cytophagia	976|Bacteroidetes	V	FtsX-like permease family	-	-	-	-	-	-	-	-	-	-	-	-	FtsX,MacB_PCD
BYD3_k127_1345512_2	1185876.BN8_01451	8.037e-238	762.0	COG0577@1|root,COG0577@2|Bacteria,4NJBI@976|Bacteroidetes,47MP8@768503|Cytophagia	976|Bacteroidetes	V	MacB-like periplasmic core domain	-	-	-	-	-	-	-	-	-	-	-	-	FtsX,MacB_PCD
BYD3_k127_1345512_1	1239962.C943_00386	3.12e-248	794.0	COG0577@1|root,COG0577@2|Bacteria,4NDUK@976|Bacteroidetes,47JJN@768503|Cytophagia	976|Bacteroidetes	V	FtsX-like permease family	-	-	-	-	-	-	-	-	-	-	-	-	FtsX,MacB_PCD
BYD3_k127_1345512_5	1094466.KQS_01220	1.985e-25	110.0	COG4704@1|root,COG4704@2|Bacteria,4NUS8@976|Bacteroidetes,1I3YT@117743|Flavobacteriia,2NZYA@237|Flavobacterium	976|Bacteroidetes	S	Uncharacterized protein conserved in bacteria (DUF2141)	-	-	-	-	-	-	-	-	-	-	-	-	DUF2141
BYD3_k127_1345512_6	485918.Cpin_5675	1.032e-24	107.0	COG0577@1|root,COG0577@2|Bacteria,4NDUK@976|Bacteroidetes,1IQ0T@117747|Sphingobacteriia	976|Bacteroidetes	V	MacB-like periplasmic core domain	-	-	-	-	-	-	-	-	-	-	-	-	FtsX,MacB_PCD
BYD3_k127_1345512_7	1123276.KB893245_gene1441	1.959e-16	81.0	COG0577@1|root,COG0577@2|Bacteria,4NDUK@976|Bacteroidetes,47NS5@768503|Cytophagia	976|Bacteroidetes	V	MacB-like periplasmic core domain	-	-	-	ko:K02004	-	M00258	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	FtsX,MacB_PCD
BYD3_k127_1345512_4	1267534.KB906754_gene2794	1.881e-75	258.0	COG0346@1|root,COG0346@2|Bacteria	2|Bacteria	E	lactoylglutathione lyase activity	-	-	-	-	-	-	-	-	-	-	-	-	Glyoxalase
BYD3_k127_1345512_0	1237149.C900_02412	0.0	1030.0	COG2217@1|root,COG2217@2|Bacteria,4NERS@976|Bacteroidetes,47MMN@768503|Cytophagia	976|Bacteroidetes	P	ATPase, P-type (transporting), HAD superfamily, subfamily IC	-	-	3.6.3.4,3.6.3.54	ko:K01533,ko:K17686	ko01524,ko04016,map01524,map04016	-	R00086	RC00002	ko00000,ko00001,ko01000	3.A.3.5	-	-	E1-E2_ATPase,HMA,Hydrolase
BYD3_k127_1358378_1	1239962.C943_04256	5.817e-133	430.0	COG3239@1|root,COG3239@2|Bacteria,4NERD@976|Bacteroidetes,47JP1@768503|Cytophagia	976|Bacteroidetes	I	fatty acid desaturase	-	-	1.14.19.3	ko:K00508	ko00591,ko01100,map00591,map01100	-	R07063	RC00917	ko00000,ko00001,ko01000,ko01004	-	-	-	FA_desaturase
BYD3_k127_1358378_2	1279009.ADICEAN_00698	4.203e-88	296.0	COG0688@1|root,COG0688@2|Bacteria,4NFU1@976|Bacteroidetes,47MWN@768503|Cytophagia	976|Bacteroidetes	I	Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer)	psd	-	4.1.1.65	ko:K01613	ko00564,ko01100,ko01110,map00564,map01100,map01110	M00093	R02055	RC00299	ko00000,ko00001,ko00002,ko01000	-	-	-	PS_Dcarbxylase
BYD3_k127_1358378_0	1237149.C900_02782	3.305e-231	722.0	COG0334@1|root,COG0334@2|Bacteria,4NEBH@976|Bacteroidetes,47K4Z@768503|Cytophagia	976|Bacteroidetes	E	Belongs to the Glu Leu Phe Val dehydrogenases family	gdhA	-	1.4.1.3	ko:K00261	ko00220,ko00250,ko00471,ko00910,ko01100,ko01200,ko04217,ko04964,map00220,map00250,map00471,map00910,map01100,map01200,map04217,map04964	M00740	R00243,R00248	RC00006,RC02799	ko00000,ko00001,ko00002,ko01000,ko04147	-	-	-	ELFV_dehydrog,ELFV_dehydrog_N
BYD3_k127_1358378_3	1348583.ATLH01000028_gene89	9.28e-10	68.0	COG0642@1|root,COG2205@2|Bacteria,4PKI2@976|Bacteroidetes,1IJ9S@117743|Flavobacteriia	976|Bacteroidetes	T	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)	-	-	-	-	-	-	-	-	-	-	-	-	HATPase_c,PAS_3,PAS_4,PAS_9
BYD3_k127_1363045_0	509190.Cseg_0176	3.23e-28	132.0	COG1752@1|root,COG1752@2|Bacteria,1RBKJ@1224|Proteobacteria,2U5NH@28211|Alphaproteobacteria	28211|Alphaproteobacteria	S	Esterase of the alpha-beta hydrolase superfamily	-	-	-	-	-	-	-	-	-	-	-	-	Patatin
BYD3_k127_1379477_1	1237149.C900_01986	4.131e-143	480.0	COG0489@1|root,COG3206@1|root,COG0489@2|Bacteria,COG3206@2|Bacteria,4NHKC@976|Bacteroidetes,47K54@768503|Cytophagia	976|Bacteroidetes	M	protein involved in exopolysaccharide biosynthesis	-	-	-	-	-	-	-	-	-	-	-	-	AAA_31,Wzz
BYD3_k127_1379477_0	1237149.C900_03600	7.788e-162	516.0	COG0399@1|root,COG0399@2|Bacteria,4NFAI@976|Bacteroidetes,47JTR@768503|Cytophagia	976|Bacteroidetes	E	Belongs to the DegT DnrJ EryC1 family	pglE	-	-	-	-	-	-	-	-	-	-	-	DegT_DnrJ_EryC1
BYD3_k127_1392270_0	761193.Runsl_0449	0.0	1264.0	COG3408@1|root,COG3408@2|Bacteria,4NESP@976|Bacteroidetes,47P6A@768503|Cytophagia	976|Bacteroidetes	G	Bacterial alpha-L-rhamnosidase C-terminal domain	-	-	3.2.1.40	ko:K05989	-	-	-	-	ko00000,ko01000	-	-	-	Bac_rhamnosid,Bac_rhamnosid6H,Bac_rhamnosid_C,Bac_rhamnosid_N
BYD3_k127_1392270_3	1237149.C900_00736	5.307e-99	329.0	COG2126@1|root,COG2126@2|Bacteria,4NEX1@976|Bacteroidetes,47NAG@768503|Cytophagia	976|Bacteroidetes	J	PFAM Ion transport protein	-	-	-	ko:K10716	-	-	-	-	ko00000,ko02000	1.A.1.1,1.A.1.13,1.A.1.17,1.A.1.24,1.A.1.25,1.A.1.6	-	-	Ion_trans
BYD3_k127_1392270_6	760192.Halhy_5322	3.927e-73	253.0	COG4106@1|root,COG4106@2|Bacteria,4NN4V@976|Bacteroidetes	976|Bacteroidetes	S	Methyltransferase domain	-	-	-	-	-	-	-	-	-	-	-	-	Methyltransf_25
BYD3_k127_1392270_4	509635.N824_24725	6.415e-85	289.0	COG5526@1|root,COG5526@2|Bacteria,4P28W@976|Bacteroidetes	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_1392270_9	471854.Dfer_1607	7.563e-22	110.0	COG0745@1|root,COG3292@1|root,COG5002@1|root,COG0745@2|Bacteria,COG3292@2|Bacteria,COG5002@2|Bacteria,4P0IA@976|Bacteroidetes,47TR0@768503|Cytophagia	976|Bacteroidetes	T	Y_Y_Y domain	-	-	-	-	-	-	-	-	-	-	-	-	HATPase_c,HTH_18,HisKA,Response_reg,Y_Y_Y
BYD3_k127_1392270_2	1123278.KB893428_gene110	6.126e-122	397.0	COG0500@1|root,COG2226@2|Bacteria,4NFRD@976|Bacteroidetes,47MKY@768503|Cytophagia	976|Bacteroidetes	Q	Putative methyltransferase	-	-	-	-	-	-	-	-	-	-	-	-	Methyltransf_11,Methyltransf_25
BYD3_k127_1392270_5	1121904.ARBP01000043_gene2121	6.488e-81	308.0	COG1404@1|root,COG3227@1|root,COG4733@1|root,COG5492@1|root,COG1404@2|Bacteria,COG3227@2|Bacteria,COG4733@2|Bacteria,COG5492@2|Bacteria,4NF8H@976|Bacteroidetes,47MX4@768503|Cytophagia	976|Bacteroidetes	E	Thermolysin metallopeptidase, catalytic domain	npr	-	3.4.24.28	ko:K01400	-	-	-	-	ko00000,ko01000,ko01002	-	-	-	CUB,FTP,MAM,PepSY,Peptidase_M4,Peptidase_M4_C,fn3
BYD3_k127_1392270_10	1121286.AUMT01000007_gene2996	0.0005322	47.0	COG3227@1|root,COG3227@2|Bacteria,4PI33@976|Bacteroidetes,1ICRY@117743|Flavobacteriia,3ZR1G@59732|Chryseobacterium	976|Bacteroidetes	E	Thermolysin metallopeptidase, alpha-helical domain	-	-	3.4.24.28	ko:K01400	-	-	-	-	ko00000,ko01000,ko01002	-	-	-	FTP,Peptidase_M4,Peptidase_M4_C
BYD3_k127_1392270_1	1237149.C900_05255	3.834e-264	858.0	COG3291@1|root,COG3291@2|Bacteria,4NJ47@976|Bacteroidetes,47JQU@768503|Cytophagia	976|Bacteroidetes	N	C-terminal domain of CHU protein family	-	-	-	-	-	-	-	-	-	-	-	-	CHU_C,PKD,SBBP
BYD3_k127_1392270_7	1123057.P872_21225	8.851e-44	166.0	COG3047@1|root,COG3047@2|Bacteria,4NQHT@976|Bacteroidetes	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	OMP_b-brl
BYD3_k127_1392270_8	1121481.AUAS01000004_gene1404	1.519e-26	109.0	COG2207@1|root,COG2207@2|Bacteria,4NGWC@976|Bacteroidetes,47K7Y@768503|Cytophagia	976|Bacteroidetes	K	Helix-turn-helix domain	-	-	-	-	-	-	-	-	-	-	-	-	HTH_18
BYD3_k127_1422787_13	1124780.ANNU01000021_gene3022	2.77e-58	204.0	COG1164@1|root,COG1164@2|Bacteria,4NFYH@976|Bacteroidetes,47JSX@768503|Cytophagia	976|Bacteroidetes	E	PFAM peptidase M3A and M3B thimet oligopeptidase F	pepF	-	-	ko:K08602	-	-	-	-	ko00000,ko01000,ko01002	-	-	-	Peptidase_M3,Peptidase_M3_N
BYD3_k127_1422787_16	1191523.MROS_1351	2.474e-39	151.0	COG1846@1|root,COG1846@2|Bacteria	2|Bacteria	K	DNA-binding transcription factor activity	slyA	-	-	-	-	-	-	-	-	-	-	-	HTH_27,MarR,MarR_2
BYD3_k127_1422787_14	1237149.C900_05616	1.77e-57	206.0	COG2353@1|root,COG2353@2|Bacteria,4NPGK@976|Bacteroidetes	976|Bacteroidetes	S	Belongs to the UPF0312 family	-	-	-	-	-	-	-	-	-	-	-	-	YceI
BYD3_k127_1422787_15	1121098.HMPREF1534_00989	7.228e-52	192.0	COG4123@1|root,COG4123@2|Bacteria,4NG1X@976|Bacteroidetes,2FMHH@200643|Bacteroidia,4AN81@815|Bacteroidaceae	976|Bacteroidetes	J	Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC)	smtA	GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008175,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016426,GO:0016430,GO:0016740,GO:0016741,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360	2.1.1.223	ko:K15460	-	-	-	-	ko00000,ko01000,ko03016	-	-	-	MTS
BYD3_k127_1422787_8	421531.IX38_22655	7.647e-97	326.0	COG0673@1|root,COG0673@2|Bacteria,4NFY3@976|Bacteroidetes,1I19J@117743|Flavobacteriia,3ZQE3@59732|Chryseobacterium	976|Bacteroidetes	S	Oxidoreductase family, C-terminal alpha/beta domain	-	-	-	-	-	-	-	-	-	-	-	-	GFO_IDH_MocA,GFO_IDH_MocA_C
BYD3_k127_1422787_11	468059.AUHA01000008_gene2774	8.478e-68	234.0	COG0662@1|root,COG0662@2|Bacteria,4NNWT@976|Bacteroidetes,1IS93@117747|Sphingobacteriia	976|Bacteroidetes	G	isomerase	-	-	-	-	-	-	-	-	-	-	-	-	MannoseP_isomer
BYD3_k127_1422787_12	1123277.KB893181_gene2265	9.603e-68	244.0	COG2207@1|root,COG2207@2|Bacteria,4NG1D@976|Bacteroidetes,47XFF@768503|Cytophagia	976|Bacteroidetes	K	helix_turn_helix, arabinose operon control protein	-	-	-	-	-	-	-	-	-	-	-	-	GAF_2,HTH_18
BYD3_k127_1422787_6	1121875.KB907547_gene3461	3.198e-108	370.0	COG0815@1|root,COG0815@2|Bacteria,4NMJK@976|Bacteroidetes,1I4UN@117743|Flavobacteriia	976|Bacteroidetes	M	Carbon-nitrogen hydrolase	-	-	-	ko:K03820	-	-	-	-	ko00000,ko01000	-	GT2	-	CN_hydrolase
BYD3_k127_1422787_4	1237149.C900_03398	4.373e-127	421.0	COG1680@1|root,COG1680@2|Bacteria,4NEVS@976|Bacteroidetes,47NMR@768503|Cytophagia	976|Bacteroidetes	V	Beta-lactamase	-	-	-	-	-	-	-	-	-	-	-	-	Beta-lactamase
BYD3_k127_1422787_5	153721.MYP_4282	4.601e-113	370.0	COG0177@1|root,COG0177@2|Bacteria,4NE7K@976|Bacteroidetes,47K0Q@768503|Cytophagia	976|Bacteroidetes	L	TIGRFAM TIGR02757 family protein	-	-	-	-	-	-	-	-	-	-	-	-	DUF2400
BYD3_k127_1422787_3	1237149.C900_03263	1.299e-150	486.0	COG2010@1|root,COG2010@2|Bacteria,4NF0A@976|Bacteroidetes,47J8Z@768503|Cytophagia	976|Bacteroidetes	C	PFAM Class III cytochrome C family	actA	-	-	-	-	-	-	-	-	-	-	-	Cytochrom_C,Cytochrom_CIII,Cytochrome_C7
BYD3_k127_1422787_0	1237149.C900_03264	0.0	1267.0	COG0437@1|root,COG0437@2|Bacteria,4NE5M@976|Bacteroidetes,47NK7@768503|Cytophagia	976|Bacteroidetes	C	4Fe-4S dicluster domain	nrfC	-	-	ko:K00184	-	-	-	-	ko00000	5.A.3	-	-	Fer4_7,Molydop_binding
BYD3_k127_1422787_1	1237149.C900_03265	3.969e-251	779.0	COG5557@1|root,COG5557@2|Bacteria,4NE3X@976|Bacteroidetes,47K18@768503|Cytophagia	976|Bacteroidetes	C	PFAM Polysulphide reductase, NrfD	nrfD	-	-	ko:K00185	-	-	-	-	ko00000	5.A.3	-	-	NrfD
BYD3_k127_1422787_9	1237149.C900_03266	2.503e-77	261.0	COG2010@1|root,COG2010@2|Bacteria,4NEX9@976|Bacteroidetes,47K4U@768503|Cytophagia	976|Bacteroidetes	C	Quinol cytochrome c oxidoreductase membrane protein	actD	-	-	-	-	-	-	-	-	-	-	-	DUF3341
BYD3_k127_1422787_10	1237149.C900_03267	2.36e-70	244.0	COG2010@1|root,COG2010@2|Bacteria,4NKQI@976|Bacteroidetes,47PEX@768503|Cytophagia	976|Bacteroidetes	C	PFAM Cytochrome C	actE	-	-	-	-	-	-	-	-	-	-	-	Cytochrome_CBB3
BYD3_k127_1422787_2	1237149.C900_03268	1.505e-187	596.0	COG4531@1|root,COG4531@2|Bacteria,4NF0R@976|Bacteroidetes,47JUF@768503|Cytophagia	976|Bacteroidetes	P	Quinol cytochrome c oxidoreductase	actF	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_1422787_7	1237149.C900_03269	4.561e-107	353.0	COG1622@1|root,COG1622@2|Bacteria,4NFNF@976|Bacteroidetes,47JF8@768503|Cytophagia	976|Bacteroidetes	C	Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B)	ctaC	-	1.9.3.1	ko:K02275	ko00190,ko01100,map00190,map01100	M00155	R00081	RC00016	ko00000,ko00001,ko00002,ko01000	3.D.4.2,3.D.4.4,3.D.4.6	-	-	COX2,COX2_TM
BYD3_k127_1442072_1	1237149.C900_03950	3.751e-98	334.0	COG0577@1|root,COG0577@2|Bacteria,4NDUK@976|Bacteroidetes,47JJN@768503|Cytophagia	976|Bacteroidetes	V	FtsX-like permease family	-	-	-	-	-	-	-	-	-	-	-	-	FtsX,MacB_PCD
BYD3_k127_1442072_2	1121904.ARBP01000008_gene3332	6.949e-46	168.0	COG1695@1|root,COG1695@2|Bacteria	2|Bacteria	K	negative regulation of transcription, DNA-templated	-	-	-	-	-	-	-	-	-	-	-	-	PadR
BYD3_k127_1442072_4	391587.KAOT1_02129	1.116e-06	53.0	COG1961@1|root,COG1961@2|Bacteria	2|Bacteria	L	recombinase activity	cisA2	GO:0000150,GO:0003674,GO:0003824,GO:0006139,GO:0006259,GO:0006310,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0071704,GO:0090304,GO:0140097,GO:1901360	-	ko:K06400	-	-	-	-	ko00000	-	-	-	Recombinase,Resolvase,Zn_ribbon_recom
BYD3_k127_1442072_3	1123277.KB893174_gene5902	2.449e-40	151.0	COG1695@1|root,COG1695@2|Bacteria,4P3EW@976|Bacteroidetes,47V29@768503|Cytophagia	976|Bacteroidetes	K	PFAM transcriptional regulator PadR family protein	-	-	-	-	-	-	-	-	-	-	-	-	PadR
BYD3_k127_1442072_0	1185876.BN8_03539	1.195e-304	950.0	COG0577@1|root,COG0577@2|Bacteria,4NDW7@976|Bacteroidetes,47N35@768503|Cytophagia	976|Bacteroidetes	V	FtsX-like permease family	-	-	-	-	-	-	-	-	-	-	-	-	FtsX,MacB_PCD
BYD3_k127_1461418_11	1123376.AUIU01000012_gene1391	8.125e-05	51.0	COG0589@1|root,COG0589@2|Bacteria	2|Bacteria	T	AMP binding	uspA	-	-	ko:K03499,ko:K06149	-	-	-	-	ko00000,ko02000	2.A.38.1,2.A.38.4	-	-	Usp
BYD3_k127_1461418_6	1237149.C900_00284	1.222e-85	292.0	COG0589@1|root,COG0589@2|Bacteria,4NFZ5@976|Bacteroidetes,47PIA@768503|Cytophagia	976|Bacteroidetes	T	Universal stress protein	-	-	-	-	-	-	-	-	-	-	-	-	Usp
BYD3_k127_1461418_8	616991.JPOO01000001_gene4165	2.363e-30	123.0	2AFVV@1|root,315YK@2|Bacteria,4NQ4S@976|Bacteroidetes,1I2VI@117743|Flavobacteriia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_1461418_2	929703.KE386491_gene2405	4.613e-141	459.0	COG2831@1|root,COG2831@2|Bacteria,4PMYI@976|Bacteroidetes,47YEW@768503|Cytophagia	976|Bacteroidetes	U	Protein of unknown function (DUF3570)	-	-	-	-	-	-	-	-	-	-	-	-	DUF3570
BYD3_k127_1461418_7	504472.Slin_1875	7.768e-46	169.0	COG0526@1|root,COG0526@2|Bacteria,4NQ50@976|Bacteroidetes,47QVC@768503|Cytophagia	976|Bacteroidetes	CO	Thioredoxin-like	-	-	-	-	-	-	-	-	-	-	-	-	Thioredoxin_7
BYD3_k127_1461418_3	1123248.KB893370_gene4976	6.64e-133	430.0	COG1477@1|root,COG1477@2|Bacteria,4NGEK@976|Bacteroidetes,1IQG3@117747|Sphingobacteriia	976|Bacteroidetes	H	Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein	apbE	-	2.7.1.180	ko:K03734	-	-	-	-	ko00000,ko01000	-	-	-	ApbE
BYD3_k127_1461418_9	929703.KE386491_gene2403	6.792e-22	97.0	2E4IE@1|root,32ZDH@2|Bacteria,4NUR6@976|Bacteroidetes,47S44@768503|Cytophagia	976|Bacteroidetes	S	Domain of unknown function (DUF4266)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4266
BYD3_k127_1461418_5	313606.M23134_05445	2.092e-87	296.0	COG1028@1|root,COG1028@2|Bacteria,4NGQY@976|Bacteroidetes,47U0W@768503|Cytophagia	976|Bacteroidetes	IQ	Enoyl-(Acyl carrier protein) reductase	-	-	1.1.1.30	ko:K00019	ko00072,ko00650,ko01100,map00072,map00650,map01100	M00088	R01361	RC00117	ko00000,ko00001,ko00002,ko01000	-	-	-	adh_short,adh_short_C2
BYD3_k127_1461418_0	929562.Emtol_2633	8.465e-206	651.0	COG1626@1|root,COG1626@2|Bacteria,4NFJW@976|Bacteroidetes,47JY4@768503|Cytophagia	976|Bacteroidetes	G	PFAM Glycoside hydrolase, family 37	treA	-	3.2.1.28	ko:K01194	ko00500,ko01100,map00500,map01100	-	R00010	RC00049	ko00000,ko00001,ko00537,ko01000	-	GH37	-	Trehalase
BYD3_k127_1461418_1	1123277.KB893181_gene2302	4.733e-178	567.0	COG0738@1|root,COG0738@2|Bacteria,4NHI6@976|Bacteroidetes,47KNG@768503|Cytophagia	976|Bacteroidetes	G	PFAM Major Facilitator Superfamily	-	-	-	-	-	-	-	-	-	-	-	-	MFS_1
BYD3_k127_1461418_4	1123248.KB893337_gene2378	2.467e-116	381.0	COG1082@1|root,COG1082@2|Bacteria,4NJJZ@976|Bacteroidetes,1IQTR@117747|Sphingobacteriia	976|Bacteroidetes	G	PFAM Xylose	-	-	-	-	-	-	-	-	-	-	-	-	AP_endonuc_2
BYD3_k127_1461418_10	1120968.AUBX01000017_gene1897	2.833e-06	58.0	COG2220@1|root,COG2220@2|Bacteria,4NFJ4@976|Bacteroidetes,47JCF@768503|Cytophagia	976|Bacteroidetes	S	Beta-lactamase superfamily domain	-	-	-	-	-	-	-	-	-	-	-	-	Lactamase_B_3
BYD3_k127_1499962_2	1237149.C900_02462	1.462e-91	306.0	COG1583@1|root,COG1583@2|Bacteria,4NJ54@976|Bacteroidetes,47MMT@768503|Cytophagia	976|Bacteroidetes	L	PFAM CRISPR associated protein Cas6	-	-	-	ko:K19091	-	-	-	-	ko00000,ko01000,ko02048	-	-	-	Cas_Cas6
BYD3_k127_1499962_0	1237149.C900_02464	9.887e-115	385.0	28HE2@1|root,2Z7QJ@2|Bacteria,4NFBA@976|Bacteroidetes,47MAE@768503|Cytophagia	976|Bacteroidetes	S	Domain of unknown function (DUF5103)	-	-	-	-	-	-	-	-	-	-	-	-	DUF5103
BYD3_k127_1499962_3	1124780.ANNU01000061_gene907	2.73e-58	208.0	COG1595@1|root,COG1595@2|Bacteria,4NQCH@976|Bacteroidetes,47QG6@768503|Cytophagia	976|Bacteroidetes	K	TIGRFAM RNA polymerase sigma factor, sigma-70 family	-	-	-	ko:K03088	-	-	-	-	ko00000,ko03021	-	-	-	Sigma70_r2,Sigma70_r4_2
BYD3_k127_1499962_4	1237149.C900_02466	4.563e-33	145.0	COG3203@1|root,COG3203@2|Bacteria	2|Bacteria	M	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane	-	-	-	-	-	-	-	-	-	-	-	-	Alginate_exp,OprD,Porin_4
BYD3_k127_1499962_1	1237149.C900_02467	7.332e-98	333.0	COG5276@1|root,COG5276@2|Bacteria,4NG4W@976|Bacteroidetes,47K9R@768503|Cytophagia	976|Bacteroidetes	S	LVIVD repeat	-	-	-	-	-	-	-	-	-	-	-	-	LVIVD
BYD3_k127_1509810_2	485917.Phep_2105	8.882e-98	323.0	COG0058@1|root,COG0058@2|Bacteria,4NGR1@976|Bacteroidetes,1IPKK@117747|Sphingobacteriia	976|Bacteroidetes	G	COGs COG0058 Glucan phosphorylase	glgP	-	2.4.1.1,2.4.1.8	ko:K00688,ko:K00691	ko00500,ko01100,ko01110,ko02026,ko04217,ko04910,ko04922,ko04931,map00500,map01100,map01110,map02026,map04217,map04910,map04922,map04931	-	R01555,R02111	RC00049	ko00000,ko00001,ko01000	-	GH65,GT35	-	DUF3417,Phosphorylase
BYD3_k127_1509810_3	1237149.C900_03811	1.318e-86	296.0	COG1120@1|root,COG1120@2|Bacteria,4NG1Q@976|Bacteroidetes	976|Bacteroidetes	HP	abc transporter (atp-binding protein)	-	-	3.6.3.34	ko:K02013	ko02010,map02010	M00240	-	-	ko00000,ko00001,ko00002,ko01000,ko02000	3.A.1.14	-	-	ABC_tran
BYD3_k127_1509810_1	1237149.C900_03810	1.927e-98	332.0	COG0609@1|root,COG0609@2|Bacteria,4NEDU@976|Bacteroidetes,47KF2@768503|Cytophagia	976|Bacteroidetes	P	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily	btuC	-	-	ko:K02015	ko02010,map02010	M00240	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.14	-	-	FecCD
BYD3_k127_1509810_0	1239962.C943_00511	9.915e-101	332.0	COG0087@1|root,COG0087@2|Bacteria,4NEAN@976|Bacteroidetes,47KMY@768503|Cytophagia	976|Bacteroidetes	J	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit	rplC	-	-	ko:K02906	ko03010,map03010	M00178,M00179	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_L3
BYD3_k127_1509810_4	866536.Belba_1710	1.297e-28	117.0	COG0088@1|root,COG0088@2|Bacteria,4NEWZ@976|Bacteroidetes,47J8V@768503|Cytophagia	976|Bacteroidetes	J	Forms part of the polypeptide exit tunnel	rplD	GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904	-	ko:K02926	ko03010,map03010	M00178	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_L4
BYD3_k127_1509882_5	313606.M23134_04182	5.352e-35	144.0	COG4886@1|root,COG4886@2|Bacteria,4NPNU@976|Bacteroidetes,47KSK@768503|Cytophagia	976|Bacteroidetes	S	Leucine-rich repeat (LRR) protein	-	-	-	-	-	-	-	-	-	-	-	-	LRR_8
BYD3_k127_1509882_2	1121373.KB903637_gene946	3.602e-109	361.0	COG2326@1|root,COG2326@2|Bacteria,4NFJ5@976|Bacteroidetes,47JG3@768503|Cytophagia	976|Bacteroidetes	S	TIGRFAM polyphosphate nucleotide phosphotransferase, PPK2 family	-	-	-	-	-	-	-	-	-	-	-	-	PPK2
BYD3_k127_1509882_6	1123276.KB893312_gene3079	6.852e-21	99.0	COG2771@1|root,COG2771@2|Bacteria,4NZPE@976|Bacteroidetes,47SXW@768503|Cytophagia	976|Bacteroidetes	K	luxR family	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_1509882_4	1237149.C900_05080	1.226e-49	181.0	COG1832@1|root,COG1832@2|Bacteria,4NSE8@976|Bacteroidetes,47RGM@768503|Cytophagia	976|Bacteroidetes	S	CoA binding domain	-	-	-	ko:K06929	-	-	-	-	ko00000	-	-	-	CoA_binding_2
BYD3_k127_1509882_0	1237149.C900_05079	1.09e-225	710.0	COG2509@1|root,COG2509@2|Bacteria,4NEUQ@976|Bacteroidetes,47K0W@768503|Cytophagia	976|Bacteroidetes	S	FAD dependent oxidoreductase	-	-	-	ko:K07137	-	-	-	-	ko00000	-	-	-	FAD_binding_2,FAD_binding_3,GIDA,HI0933_like,Pyr_redox_2
BYD3_k127_1509882_1	1237149.C900_05078	1.339e-200	641.0	COG2849@1|root,COG2849@2|Bacteria,4NMDX@976|Bacteroidetes,47JEK@768503|Cytophagia	976|Bacteroidetes	S	MORN repeat variant	-	-	-	-	-	-	-	-	-	-	-	-	MORN_2
BYD3_k127_1509882_3	1237149.C900_05077	8.557e-51	184.0	COG3483@1|root,COG3483@2|Bacteria,4NFG4@976|Bacteroidetes,47KCQ@768503|Cytophagia	976|Bacteroidetes	E	Tryptophan 2,3-dioxygenase	kynA	-	1.13.11.11	ko:K00453	ko00380,ko01100,map00380,map01100	M00038	R00678	RC00356	ko00000,ko00001,ko00002,ko01000	-	-	-	Trp_dioxygenase
BYD3_k127_1527616_2	1123057.P872_04760	1.293e-12	83.0	COG3291@1|root,COG5498@1|root,COG3291@2|Bacteria,COG5498@2|Bacteria,4PPR2@976|Bacteroidetes,47YQN@768503|Cytophagia	976|Bacteroidetes	G	Pkd domain containing protein	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_1527616_1	1123248.KB893381_gene1089	1.187e-74	289.0	COG1345@1|root,COG2931@1|root,COG3055@1|root,COG3386@1|root,COG1345@2|Bacteria,COG2931@2|Bacteria,COG3055@2|Bacteria,COG3386@2|Bacteria,4NK33@976|Bacteroidetes,1IX26@117747|Sphingobacteriia	976|Bacteroidetes	G	domain, Protein	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_1527616_0	269798.CHU_1335	8.623e-91	342.0	COG2010@1|root,COG2911@1|root,COG3291@1|root,COG4733@1|root,COG2010@2|Bacteria,COG2911@2|Bacteria,COG3291@2|Bacteria,COG4733@2|Bacteria,4PM1S@976|Bacteroidetes,47R6W@768503|Cytophagia	976|Bacteroidetes	C	regulator of chromosome condensation, RCC1	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_1532691_2	700598.Niako_5344	9.131e-100	337.0	COG0438@1|root,COG0438@2|Bacteria,4NJR3@976|Bacteroidetes	976|Bacteroidetes	M	Glycosyltransferase Family 4	-	-	-	-	-	-	-	-	-	-	-	-	Glyco_transf_4,Glycos_transf_1
BYD3_k127_1532691_1	985255.APHJ01000023_gene2597	4.505e-117	387.0	COG0438@1|root,COG0438@2|Bacteria,4NGYT@976|Bacteroidetes,1HYZ0@117743|Flavobacteriia,2P6BC@244698|Gillisia	976|Bacteroidetes	M	Glycosyltransferase Family 4	-	-	-	-	-	-	-	-	-	-	-	-	Glyco_trans_4_2,Glyco_transf_4,Glycos_transf_1
BYD3_k127_1532691_3	1237149.C900_03592	4.688e-85	292.0	COG1247@1|root,COG1247@2|Bacteria,4NM05@976|Bacteroidetes,47YJJ@768503|Cytophagia	976|Bacteroidetes	M	Acetyltransferase (GNAT) domain	-	-	-	-	-	-	-	-	-	-	-	-	Acetyltransf_9
BYD3_k127_1532691_0	1237149.C900_03593	4.081e-136	444.0	2DBB7@1|root,2Z85R@2|Bacteria,4NJNG@976|Bacteroidetes,47RTY@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_1532691_4	1237149.C900_03594	1.146e-38	149.0	COG0726@1|root,COG0726@2|Bacteria,4NK5Y@976|Bacteroidetes,47PCK@768503|Cytophagia	976|Bacteroidetes	G	Polysaccharide deacetylase	-	-	-	-	-	-	-	-	-	-	-	-	Polysacc_deac_1
BYD3_k127_1537155_4	1122176.KB903543_gene687	1.31e-33	133.0	COG0642@1|root,COG2205@2|Bacteria,4NEFW@976|Bacteroidetes,1IS7E@117747|Sphingobacteriia	976|Bacteroidetes	T	Histidine kinase	rprX	-	2.7.13.3	ko:K07636	ko02020,map02020	M00434	-	-	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	-	-	-	HATPase_c,HisKA
BYD3_k127_1537155_2	1121097.JCM15093_1986	8.109e-63	224.0	COG0745@1|root,COG0745@2|Bacteria,4NF1I@976|Bacteroidetes,2FNZV@200643|Bacteroidia,4AKWQ@815|Bacteroidaceae	976|Bacteroidetes	K	COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain	rprY	-	-	-	-	-	-	-	-	-	-	-	Response_reg,Trans_reg_C
BYD3_k127_1537155_6	1205753.A989_14387	3.117e-11	66.0	2EK70@1|root,33DXD@2|Bacteria,1NA99@1224|Proteobacteria,1SJFZ@1236|Gammaproteobacteria,1X82Y@135614|Xanthomonadales	135614|Xanthomonadales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_1537155_5	869213.JCM21142_73072	1.811e-13	79.0	COG0671@1|root,COG0671@2|Bacteria	2|Bacteria	I	phosphatidate phosphatase activity	-	-	3.6.1.27	ko:K19302	ko00550,map00550	-	R05627	RC00002	ko00000,ko00001,ko01000,ko01011	-	-	-	PAP2
BYD3_k127_1537155_7	1121957.ATVL01000008_gene4299	0.0007585	46.0	COG0707@1|root,COG0707@2|Bacteria,4PKSS@976|Bacteroidetes,47NVZ@768503|Cytophagia	976|Bacteroidetes	M	Glycosyl transferase family 1	-	-	-	-	-	-	-	-	-	-	-	-	Glyco_trans_1_3
BYD3_k127_1537155_0	700598.Niako_0791	1.917e-183	581.0	COG1730@1|root,COG1730@2|Bacteria,4PAM0@976|Bacteroidetes,1IW3E@117747|Sphingobacteriia	976|Bacteroidetes	O	unfolded protein binding	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_1537155_3	925409.KI911562_gene1749	6.914e-53	190.0	COG2146@1|root,COG2146@2|Bacteria,4NQXD@976|Bacteroidetes,1J0F5@117747|Sphingobacteriia	976|Bacteroidetes	P	Rieske [2Fe-2S] domain	-	-	-	-	-	-	-	-	-	-	-	-	Rieske
BYD3_k127_1537155_1	925409.KI911562_gene1748	1.107e-109	359.0	COG3488@1|root,COG3488@2|Bacteria,4NGBS@976|Bacteroidetes	976|Bacteroidetes	C	Thiol oxidoreductase	-	-	-	-	-	-	-	-	-	-	-	-	DHOR
BYD3_k127_1545893_0	929562.Emtol_2058	6.865e-179	564.0	COG2255@1|root,COG2255@2|Bacteria,4NEB9@976|Bacteroidetes,47M82@768503|Cytophagia	976|Bacteroidetes	L	The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing	ruvB	-	3.6.4.12	ko:K03551	ko03440,map03440	-	-	-	ko00000,ko00001,ko01000,ko03400	-	-	-	RuvB_C,RuvB_N
BYD3_k127_1545893_1	1237149.C900_02765	9.389e-110	366.0	COG1477@1|root,COG1477@2|Bacteria,4NGEK@976|Bacteroidetes,47N34@768503|Cytophagia	976|Bacteroidetes	H	Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein	apbE	-	2.7.1.180	ko:K03734	-	-	-	-	ko00000,ko01000	-	-	-	ApbE
BYD3_k127_1545893_2	1237149.C900_02763	5.055e-72	251.0	COG0428@1|root,COG0428@2|Bacteria,4NG1R@976|Bacteroidetes,47Q1F@768503|Cytophagia	976|Bacteroidetes	P	ZIP Zinc transporter	-	-	-	-	-	-	-	-	-	-	-	-	Zip
BYD3_k127_1545893_3	700598.Niako_4337	2.85e-24	105.0	COG0535@1|root,COG0535@2|Bacteria	2|Bacteria	I	radical SAM domain protein	pqqC	-	1.3.3.11	ko:K06137,ko:K06138	-	-	-	-	ko00000,ko01000	-	-	-	Fer4_12,Fer4_14,PqqD,Radical_SAM,SPASM,TENA_THI-4
BYD3_k127_1558993_14	1122621.ATZA01000011_gene384	1.479e-26	110.0	COG2133@1|root,COG2133@2|Bacteria,4NIMV@976|Bacteroidetes,1ISA9@117747|Sphingobacteriia	976|Bacteroidetes	G	Domain of Unknown Function (DUF1080)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1080
BYD3_k127_1558993_15	1237149.C900_05848	4.059e-13	83.0	COG0457@1|root,COG3437@1|root,COG0457@2|Bacteria,COG3437@2|Bacteria	2|Bacteria	T	response regulator, receiver	-	-	2.7.13.3,2.7.7.65,4.6.1.1	ko:K01768,ko:K03415,ko:K07777,ko:K18967	ko00230,ko02020,ko02025,ko02030,ko04113,ko04213,map00230,map02020,map02025,map02030,map04113,map04213	M00478,M00506,M00695	R00089,R00434	RC00295	ko00000,ko00001,ko00002,ko01000,ko01001,ko02000,ko02022,ko02035	9.B.34.1.1	-	-	5TM-5TMR_LYT,CheW,GGDEF,PAS_3,PAS_9,Response_reg
BYD3_k127_1558993_2	1123248.KB893348_gene194	3.056e-118	413.0	COG2972@1|root,COG3292@1|root,COG2972@2|Bacteria,COG3292@2|Bacteria,4NJMF@976|Bacteroidetes,1IWR7@117747|Sphingobacteriia	976|Bacteroidetes	T	Y_Y_Y domain	-	-	-	-	-	-	-	-	-	-	-	-	His_kinase,Reg_prop,Y_Y_Y
BYD3_k127_1558993_10	1122176.KB903561_gene3586	1.13e-45	171.0	COG2353@1|root,COG2353@2|Bacteria,4NI82@976|Bacteroidetes,1IXPV@117747|Sphingobacteriia	976|Bacteroidetes	S	YceI-like domain	-	-	-	-	-	-	-	-	-	-	-	-	YceI
BYD3_k127_1558993_9	761193.Runsl_2080	1.015e-53	194.0	COG1595@1|root,COG1595@2|Bacteria,4NNBY@976|Bacteroidetes,47PH5@768503|Cytophagia	976|Bacteroidetes	K	RNA polymerase sigma factor, sigma-70 family	-	-	-	ko:K03088	-	-	-	-	ko00000,ko03021	-	-	-	Sigma70_r2,Sigma70_r4_2
BYD3_k127_1558993_11	485918.Cpin_6759	1.53e-44	174.0	COG3712@1|root,COG3712@2|Bacteria,4NMA2@976|Bacteroidetes,1IS2K@117747|Sphingobacteriia	976|Bacteroidetes	PT	PFAM FecR protein	-	-	-	-	-	-	-	-	-	-	-	-	DUF4974,FecR
BYD3_k127_1558993_17	714943.Mucpa_4641	0.0003593	52.0	COG4206@1|root,COG4206@2|Bacteria,4P258@976|Bacteroidetes,1INQW@117747|Sphingobacteriia	976|Bacteroidetes	H	PFAM TonB-dependent Receptor Plug	-	-	-	-	-	-	-	-	-	-	-	-	CarbopepD_reg_2,Plug,STN,TonB_dep_Rec
BYD3_k127_1558993_1	504472.Slin_3337	2.039e-125	407.0	COG1082@1|root,COG1082@2|Bacteria,4NFMD@976|Bacteroidetes,47JA9@768503|Cytophagia	976|Bacteroidetes	G	Xylose isomerase domain protein TIM barrel	-	-	-	-	-	-	-	-	-	-	-	-	AP_endonuc_2
BYD3_k127_1558993_0	1166018.FAES_1410	1.06e-286	888.0	COG2303@1|root,COG2303@2|Bacteria,4NK1Z@976|Bacteroidetes,47NME@768503|Cytophagia	976|Bacteroidetes	E	GMC oxidoreductase	-	-	-	-	-	-	-	-	-	-	-	-	GMC_oxred_C,GMC_oxred_N
BYD3_k127_1558993_12	1239962.C943_03954	9.497e-38	147.0	2CDAN@1|root,309X8@2|Bacteria,4NRN2@976|Bacteroidetes,47QB3@768503|Cytophagia	976|Bacteroidetes	S	Gluconate 2-dehydrogenase subunit 3	-	-	-	-	-	-	-	-	-	-	-	-	Gluconate_2-dh3
BYD3_k127_1558993_6	401053.AciPR4_0307	3.451e-90	305.0	COG3828@1|root,COG3828@2|Bacteria,3Y2YZ@57723|Acidobacteria,2JIMF@204432|Acidobacteriia	204432|Acidobacteriia	S	Trehalose utilisation	-	-	-	-	-	-	-	-	-	-	-	-	ThuA
BYD3_k127_1558993_3	639030.JHVA01000001_gene1602	1.845e-97	325.0	COG3828@1|root,COG3828@2|Bacteria,3Y2YZ@57723|Acidobacteria,2JIMF@204432|Acidobacteriia	204432|Acidobacteriia	S	Trehalose utilisation	-	-	-	-	-	-	-	-	-	-	-	-	ThuA
BYD3_k127_1558993_7	391598.FBBAL38_11714	4.283e-72	251.0	COG1262@1|root,COG1262@2|Bacteria,4NEUZ@976|Bacteroidetes,1HYG0@117743|Flavobacteriia	976|Bacteroidetes	S	Sulfatase-modifying factor enzyme 1	-	-	-	-	-	-	-	-	-	-	-	-	FGE-sulfatase
BYD3_k127_1558993_13	1121897.AUGO01000004_gene884	1.233e-34	138.0	COG0454@1|root,COG0456@2|Bacteria,4NHRI@976|Bacteroidetes,1I38S@117743|Flavobacteriia,2NVVX@237|Flavobacterium	976|Bacteroidetes	K	Acetyltransferase (GNAT) domain	-	-	-	-	-	-	-	-	-	-	-	-	Acetyltransf_1
BYD3_k127_1558993_5	313606.M23134_04078	3.041e-90	308.0	COG4977@1|root,COG4977@2|Bacteria,4NGSR@976|Bacteroidetes,47Q3H@768503|Cytophagia	976|Bacteroidetes	K	DJ-1/PfpI family	-	-	-	-	-	-	-	-	-	-	-	-	DJ-1_PfpI,HTH_18,HTH_AraC
BYD3_k127_1558993_8	1317122.ATO12_20385	1.182e-65	241.0	COG4977@1|root,COG4977@2|Bacteria,4NHHE@976|Bacteroidetes,1HXNU@117743|Flavobacteriia,2YGSD@290174|Aquimarina	976|Bacteroidetes	K	DJ-1/PfpI family	-	-	-	-	-	-	-	-	-	-	-	-	DJ-1_PfpI
BYD3_k127_1558993_16	1121459.AQXE01000008_gene777	2.357e-05	53.0	COG3794@1|root,COG3794@2|Bacteria,1N3IJ@1224|Proteobacteria,42TYB@68525|delta/epsilon subdivisions,2WR42@28221|Deltaproteobacteria,2MCVC@213115|Desulfovibrionales	28221|Deltaproteobacteria	C	Cytochrome P460	-	-	-	-	-	-	-	-	-	-	-	-	Cytochrome_P460
BYD3_k127_1558993_4	1123248.KB893348_gene142	4.387e-95	320.0	2DBQG@1|root,2ZADX@2|Bacteria,4PI3K@976|Bacteroidetes,1IUKI@117747|Sphingobacteriia	976|Bacteroidetes	S	Domain of Unknown Function (DUF1080)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1080
BYD3_k127_1569558_2	1121904.ARBP01000016_gene5279	1.206e-204	647.0	COG0247@1|root,COG0277@1|root,COG0247@2|Bacteria,COG0277@2|Bacteria,4NEK3@976|Bacteroidetes,47JNC@768503|Cytophagia	976|Bacteroidetes	C	FAD linked oxidases, C-terminal domain	-	-	-	-	-	-	-	-	-	-	-	-	CCG,FAD-oxidase_C,FAD_binding_4,Fer4_17,Fer4_8
BYD3_k127_1569558_8	926549.KI421517_gene429	1.368e-96	327.0	COG1082@1|root,COG1082@2|Bacteria,4NIG9@976|Bacteroidetes,47NIT@768503|Cytophagia	976|Bacteroidetes	G	Xylose isomerase-like TIM barrel	-	-	-	-	-	-	-	-	-	-	-	-	AP_endonuc_2
BYD3_k127_1569558_6	700598.Niako_2542	2.551e-119	391.0	COG1052@1|root,COG1052@2|Bacteria,4NIHV@976|Bacteroidetes,1IPKW@117747|Sphingobacteriia	976|Bacteroidetes	CH	D-isomer specific 2-hydroxyacid dehydrogenase	hprA	-	1.1.1.29	ko:K00018	ko00260,ko00630,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,map00260,map00630,map00680,map01100,map01110,map01120,map01130,map01200	M00346	R00717,R01388	RC00031,RC00042	ko00000,ko00001,ko00002,ko01000	-	-	-	2-Hacid_dh,2-Hacid_dh_C
BYD3_k127_1569558_5	1047013.AQSP01000089_gene1181	3.553e-154	510.0	COG0457@1|root,COG2114@1|root,COG5616@1|root,COG0457@2|Bacteria,COG2114@2|Bacteria,COG5616@2|Bacteria	2|Bacteria	S	cAMP biosynthetic process	cyaJ	-	4.6.1.1	ko:K01768,ko:K02483	ko00230,ko02025,ko04113,ko04213,map00230,map02025,map04113,map04213	M00695	R00089,R00434	RC00295	ko00000,ko00001,ko00002,ko01000,ko02022	-	-	-	Guanylate_cyc,HTH_18,TPR_16,TPR_19,TPR_2,TPR_8
BYD3_k127_1569558_7	929703.KE386491_gene2799	1.712e-108	359.0	COG3970@1|root,COG3970@2|Bacteria,4NGTH@976|Bacteroidetes,47MQU@768503|Cytophagia	976|Bacteroidetes	S	PFAM fumarylacetoacetate (FAA) hydrolase	-	-	4.2.1.141	ko:K14259	ko00040,map00040	-	R09186	RC00429	ko00000,ko00001,ko01000	-	-	-	FAA_hydrolase
BYD3_k127_1569558_4	1166018.FAES_4421	9.624e-157	509.0	COG1012@1|root,COG1012@2|Bacteria,4NEKG@976|Bacteroidetes,47MQT@768503|Cytophagia	976|Bacteroidetes	C	PFAM Aldehyde dehydrogenase	aldH	-	1.2.1.26	ko:K13877	ko00040,ko00053,map00040,map00053	-	R00264	RC00080	ko00000,ko00001,ko01000	-	-	-	Aldedh
BYD3_k127_1569558_9	1345695.CLSA_c37990	2.732e-57	213.0	COG3584@1|root,COG3584@2|Bacteria,1VW6B@1239|Firmicutes,24MFE@186801|Clostridia,36QRA@31979|Clostridiaceae	186801|Clostridia	S	Butirosin biosynthesis protein H, N-terminal	-	-	-	-	-	-	-	-	-	-	-	-	Peptidase_C39_2
BYD3_k127_1569558_11	517722.AEUE01000010_gene532	0.0001312	53.0	COG3468@1|root,COG4412@1|root,COG3468@2|Bacteria,COG4412@2|Bacteria,1MVQ6@1224|Proteobacteria,2UAUP@28211|Alphaproteobacteria	28211|Alphaproteobacteria	MU	Outer membrane autotransporter	-	-	-	-	-	-	-	-	-	-	-	-	Autotransporter,Calx-beta
BYD3_k127_1569558_3	509635.N824_20010	3.667e-158	505.0	COG3391@1|root,COG3391@2|Bacteria,4NH92@976|Bacteroidetes,1IQ1F@117747|Sphingobacteriia	976|Bacteroidetes	S	NHL repeat containing protein	-	-	-	-	-	-	-	-	-	-	-	-	DUF5128
BYD3_k127_1569558_0	504472.Slin_0108	1.102e-278	872.0	COG0644@1|root,COG0644@2|Bacteria,4P07W@976|Bacteroidetes,47N5I@768503|Cytophagia	976|Bacteroidetes	C	FAD dependent oxidoreductase	-	-	-	-	-	-	-	-	-	-	-	-	FAD_oxidored
BYD3_k127_1569558_1	761193.Runsl_1740	1.575e-205	646.0	COG3458@1|root,COG3458@2|Bacteria,4NGH5@976|Bacteroidetes,47MHG@768503|Cytophagia	976|Bacteroidetes	Q	PFAM Acetyl xylan esterase	axe7A_2	-	-	-	-	-	-	-	-	-	-	-	AXE1
BYD3_k127_1569558_10	1166018.FAES_2669	1.809e-46	168.0	COG3828@1|root,COG3828@2|Bacteria,4NDVK@976|Bacteroidetes,47P9N@768503|Cytophagia	976|Bacteroidetes	S	Trehalose utilisation	-	-	-	ko:K08738,ko:K09992	ko00920,ko01100,ko01120,ko01524,ko02020,ko04115,ko04210,ko04214,ko04215,ko04932,ko05010,ko05012,ko05014,ko05016,ko05134,ko05145,ko05152,ko05161,ko05164,ko05167,ko05168,ko05200,ko05210,ko05222,ko05416,map00920,map01100,map01120,map01524,map02020,map04115,map04210,map04214,map04215,map04932,map05010,map05012,map05014,map05016,map05134,map05145,map05152,map05161,map05164,map05167,map05168,map05200,map05210,map05222,map05416	M00595	R10151	RC03151,RC03152	ko00000,ko00001,ko00002	3.D.4.6	-	-	CBM_6,Cytochrom_C,GSDH,PKD,ThuA
BYD3_k127_1571477_1	1048983.EL17_14460	1.408e-60	220.0	COG5571@1|root,COG5571@2|Bacteria,4NMBF@976|Bacteroidetes,47RWM@768503|Cytophagia	976|Bacteroidetes	N	Domain of unknown function (DUF4421)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4421
BYD3_k127_1571477_0	1229276.DI53_3611	3.333e-163	517.0	COG3546@1|root,COG3546@2|Bacteria,4NHIN@976|Bacteroidetes	976|Bacteroidetes	P	Manganese containing catalase	-	-	-	-	-	-	-	-	-	-	-	-	Mn_catalase
BYD3_k127_1571477_2	1123234.AUKI01000003_gene207	6.228e-08	54.0	COG1801@1|root,COG1801@2|Bacteria,4NHAD@976|Bacteroidetes,1HWV1@117743|Flavobacteriia	976|Bacteroidetes	S	Protein of unknown function DUF72	-	-	-	-	-	-	-	-	-	-	-	-	DUF72
BYD3_k127_1573362_10	1121859.KB890738_gene3403	1.374e-37	145.0	COG4773@1|root,COG4773@2|Bacteria,4PP9G@976|Bacteroidetes,47YJ3@768503|Cytophagia	976|Bacteroidetes	P	TonB-dependent Receptor Plug Domain	-	-	-	ko:K02014	-	-	-	-	ko00000,ko02000	1.B.14	-	-	CarbopepD_reg_2,Plug,TonB_dep_Rec
BYD3_k127_1573362_5	1237149.C900_05513	5.535e-81	278.0	COG3001@1|root,COG3001@2|Bacteria,4NEQY@976|Bacteroidetes,47K5K@768503|Cytophagia	976|Bacteroidetes	G	Fructosamine kinase	-	-	-	-	-	-	-	-	-	-	-	-	Fructosamin_kin
BYD3_k127_1573362_3	1237149.C900_00782	1.875e-153	490.0	COG0492@1|root,COG0492@2|Bacteria,4NDVS@976|Bacteroidetes,47MQ3@768503|Cytophagia	976|Bacteroidetes	O	Pyridine nucleotide-disulphide oxidoreductase	ypdA	-	1.8.1.9	ko:K00384	ko00450,map00450	-	R02016,R03596,R09372	RC00013,RC02518,RC02873	ko00000,ko00001,ko01000	-	-	-	Pyr_redox_3
BYD3_k127_1573362_0	1237149.C900_05510	3.869e-286	897.0	COG0823@1|root,COG1506@1|root,COG0823@2|Bacteria,COG1506@2|Bacteria,4NETS@976|Bacteroidetes,47KF8@768503|Cytophagia	976|Bacteroidetes	EU	Dipeptidyl peptidase IV (DPP IV) N-terminal region	dpp	-	3.4.14.5	ko:K01278	ko04974,map04974	-	-	-	ko00000,ko00001,ko01000,ko01002,ko04090,ko04147	-	-	-	DPPIV_N,Peptidase_S9
BYD3_k127_1573362_1	926556.Echvi_1296	1.082e-238	746.0	COG0008@1|root,COG0008@2|Bacteria,4NEED@976|Bacteroidetes,47K3J@768503|Cytophagia	976|Bacteroidetes	J	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)	gltX	-	6.1.1.17	ko:K01885	ko00860,ko00970,ko01100,ko01110,ko01120,map00860,map00970,map01100,map01110,map01120	M00121,M00359,M00360	R05578	RC00055,RC00523	ko00000,ko00001,ko00002,ko01000,ko01007,ko02048,ko03016	-	-	-	tRNA-synt_1c
BYD3_k127_1573362_13	1237149.C900_04484	8.197e-18	85.0	2E4W4@1|root,32ZQB@2|Bacteria,4NUZZ@976|Bacteroidetes,47RZI@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_1573362_4	1237149.C900_04485	4.726e-135	433.0	COG2013@1|root,COG2013@2|Bacteria,4NFNA@976|Bacteroidetes,47KS9@768503|Cytophagia	976|Bacteroidetes	S	Mitochondrial biogenesis AIM24	-	-	-	-	-	-	-	-	-	-	-	-	AIM24
BYD3_k127_1573362_9	1313421.JHBV01000022_gene4667	2.32e-44	168.0	COG0664@1|root,COG0664@2|Bacteria,4NNIX@976|Bacteroidetes	976|Bacteroidetes	T	cyclic nucleotide-binding	-	-	-	-	-	-	-	-	-	-	-	-	cNMP_binding
BYD3_k127_1573362_11	1121957.ATVL01000011_gene3912	6.005e-36	144.0	COG2318@1|root,COG2318@2|Bacteria,4NP2C@976|Bacteroidetes,47Q0U@768503|Cytophagia	976|Bacteroidetes	S	DinB superfamily	-	-	-	-	-	-	-	-	-	-	-	-	DinB_2
BYD3_k127_1573362_2	1237149.C900_04486	2.84e-161	517.0	COG0686@1|root,COG0686@2|Bacteria,4NF46@976|Bacteroidetes,47KRS@768503|Cytophagia	976|Bacteroidetes	E	Alanine dehydrogenase PNT, N-terminal domain	-	-	-	-	-	-	-	-	-	-	-	-	AlaDh_PNT_C,AlaDh_PNT_N
BYD3_k127_1573362_6	1230342.CTM_15058	3.793e-78	266.0	COG1272@1|root,COG1272@2|Bacteria,1TSFK@1239|Firmicutes,24CPT@186801|Clostridia,36ICC@31979|Clostridiaceae	186801|Clostridia	S	hemolysin III	hlyIII	-	-	ko:K11068	-	-	-	-	ko00000,ko02042	-	-	-	HlyIII
BYD3_k127_1573362_12	1237149.C900_03225	2.458e-32	128.0	2C9BK@1|root,32RP1@2|Bacteria,4NSPA@976|Bacteroidetes,47RVQ@768503|Cytophagia	976|Bacteroidetes	S	Domain of unknown function (DUF4286)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4286
BYD3_k127_1573362_15	1279009.ADICEAN_02251	8.497e-10	64.0	2E46C@1|root,33EHC@2|Bacteria,4NY42@976|Bacteroidetes,47T1K@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_1573362_7	866536.Belba_0607	3.046e-71	244.0	COG0454@1|root,COG0456@2|Bacteria,4NNJS@976|Bacteroidetes,47PUS@768503|Cytophagia	976|Bacteroidetes	K	PFAM Acetyltransferase (GNAT) family	-	-	-	-	-	-	-	-	-	-	-	-	Acetyltransf_1
BYD3_k127_1573362_14	714943.Mucpa_4956	1.486e-10	65.0	2CCSR@1|root,32RWC@2|Bacteria,4NUMI@976|Bacteroidetes,1ITWM@117747|Sphingobacteriia	976|Bacteroidetes	S	23S rRNA-intervening sequence protein	-	-	-	-	-	-	-	-	-	-	-	-	23S_rRNA_IVP
BYD3_k127_1573362_17	1124780.ANNU01000017_gene1876	1.896e-07	59.0	2EEHV@1|root,338BQ@2|Bacteria,4NWH5@976|Bacteroidetes,47SB4@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_1573362_8	1237149.C900_04481	3.433e-45	166.0	COG0251@1|root,COG0251@2|Bacteria,4NQ8M@976|Bacteroidetes,47QE4@768503|Cytophagia	976|Bacteroidetes	J	TIGRFAM endoribonuclease L-PSP	yjgF	-	3.5.99.10	ko:K09022	-	-	R11098,R11099	RC03275,RC03354	ko00000,ko01000	-	-	-	Ribonuc_L-PSP
BYD3_k127_1573362_19	643867.Ftrac_2235	0.0004395	45.0	COG1250@1|root,COG1250@2|Bacteria,4NWYY@976|Bacteroidetes,47VDX@768503|Cytophagia	976|Bacteroidetes	I	3-hydroxyacyl-CoA dehydrogenase, C-terminal domain	-	-	-	-	-	-	-	-	-	-	-	-	3HCDH
BYD3_k127_1574142_3	1443665.JACA01000049_gene5397	1.404e-13	72.0	COG2353@1|root,COG2353@2|Bacteria,4NNMD@976|Bacteroidetes,1I39B@117743|Flavobacteriia,2YK2H@290174|Aquimarina	976|Bacteroidetes	S	YceI-like domain	-	-	-	-	-	-	-	-	-	-	-	-	YceI
BYD3_k127_1574142_2	1408473.JHXO01000002_gene3931	9.825e-101	337.0	COG0604@1|root,COG0604@2|Bacteria,4NHHT@976|Bacteroidetes,2FR11@200643|Bacteroidia	976|Bacteroidetes	C	Zinc-binding dehydrogenase	-	-	-	-	-	-	-	-	-	-	-	-	ADH_N,ADH_N_2,ADH_zinc_N_2
BYD3_k127_1574142_0	243090.RB609	2.809e-179	587.0	COG0412@1|root,COG3458@1|root,COG0412@2|Bacteria,COG3458@2|Bacteria	2|Bacteria	Q	cephalosporin-C deacetylase activity	-	-	3.1.1.45	ko:K01061	ko00361,ko00364,ko00623,ko01100,ko01110,ko01120,ko01130,map00361,map00364,map00623,map01100,map01110,map01120,map01130	-	R03893,R05510,R05511,R06835,R06838,R08120,R08121,R09136,R09220,R09222	RC01018,RC01906,RC01907,RC02441,RC02467,RC02468,RC02674,RC02675,RC02686	ko00000,ko00001,ko01000	-	-	-	AXE1,Abhydrolase_7,DLH,Peptidase_S9
BYD3_k127_1574142_1	1124780.ANNU01000008_gene2689	3.136e-137	444.0	COG0246@1|root,COG0246@2|Bacteria,4NEMT@976|Bacteroidetes,47K47@768503|Cytophagia	976|Bacteroidetes	G	PFAM Mannitol dehydrogenase	uxaB	GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006063,GO:0006082,GO:0008150,GO:0008152,GO:0009026,GO:0009056,GO:0009987,GO:0016052,GO:0016054,GO:0016491,GO:0016614,GO:0016616,GO:0019586,GO:0019698,GO:0019752,GO:0032787,GO:0036094,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044281,GO:0044282,GO:0044424,GO:0044444,GO:0044464,GO:0046365,GO:0046395,GO:0046396,GO:0046397,GO:0048037,GO:0050662,GO:0051287,GO:0055114,GO:0071704,GO:0072329,GO:0097159,GO:1901265,GO:1901363,GO:1901575	1.1.1.17,1.1.1.58	ko:K00009,ko:K00041	ko00040,ko00051,ko01100,map00040,map00051,map01100	M00631	R02555,R02703	RC00085	ko00000,ko00001,ko00002,ko01000	-	-	-	Mannitol_dh,Mannitol_dh_C
BYD3_k127_1583295_4	880071.Fleli_2457	4.116e-50	186.0	COG3279@1|root,COG3279@2|Bacteria,4NF8A@976|Bacteroidetes,47RF9@768503|Cytophagia	976|Bacteroidetes	KT	LytTr DNA-binding domain	-	-	-	-	-	-	-	-	-	-	-	-	LytTR,Response_reg
BYD3_k127_1583295_8	404589.Anae109_2916	1.066e-29	122.0	COG2203@1|root,COG3576@1|root,COG2203@2|Bacteria,COG3576@2|Bacteria,1PKS2@1224|Proteobacteria,42T45@68525|delta/epsilon subdivisions,2WPSR@28221|Deltaproteobacteria	28221|Deltaproteobacteria	T	pyridoxamine 5'-phosphate oxidase-related FMN-binding	-	-	-	ko:K07006	-	-	-	-	ko00000	-	-	-	Putative_PNPOx
BYD3_k127_1583295_5	1237149.C900_05613	1.691e-46	184.0	COG0457@1|root,COG0642@1|root,COG0457@2|Bacteria,COG2205@2|Bacteria,4NI29@976|Bacteroidetes,47KZN@768503|Cytophagia	976|Bacteroidetes	T	PFAM Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase	-	-	-	-	-	-	-	-	-	-	-	-	HATPase_c,HisKA,TPR_12,TPR_7,TPR_8
BYD3_k127_1583295_3	926549.KI421517_gene1741	1.707e-63	227.0	COG2010@1|root,COG2010@2|Bacteria,4NQXA@976|Bacteroidetes,47QS4@768503|Cytophagia	976|Bacteroidetes	C	Cytochrome c	-	-	-	-	-	-	-	-	-	-	-	-	Cytochrom_C
BYD3_k127_1583295_2	700598.Niako_1610	3.258e-209	659.0	COG0673@1|root,COG0673@2|Bacteria,4NEN5@976|Bacteroidetes,1IRBM@117747|Sphingobacteriia	976|Bacteroidetes	S	Oxidoreductase	-	-	-	-	-	-	-	-	-	-	-	-	GFO_IDH_MocA
BYD3_k127_1583295_1	485918.Cpin_0817	1.124e-250	780.0	COG0673@1|root,COG0673@2|Bacteria,4NEN5@976|Bacteroidetes,1IRBM@117747|Sphingobacteriia	976|Bacteroidetes	S	Oxidoreductase	-	-	-	-	-	-	-	-	-	-	-	-	GFO_IDH_MocA
BYD3_k127_1583295_0	485918.Cpin_0819	1.246e-298	924.0	COG2303@1|root,COG2303@2|Bacteria,4NEHP@976|Bacteroidetes,1IPAY@117747|Sphingobacteriia	976|Bacteroidetes	E	Oxidoreductase	-	-	-	-	-	-	-	-	-	-	-	-	FAD_binding_2,GMC_oxred_C,GMC_oxred_N
BYD3_k127_1583295_7	1124780.ANNU01000017_gene1931	8.766e-32	124.0	COG0759@1|root,COG0759@2|Bacteria,4NV1N@976|Bacteroidetes,47RUP@768503|Cytophagia	976|Bacteroidetes	S	Could be involved in insertion of integral membrane proteins into the membrane	-	-	-	ko:K08998	-	-	-	-	ko00000	-	-	-	Haemolytic
BYD3_k127_1583295_6	1237149.C900_03333	2.25e-35	139.0	COG0215@1|root,COG0215@2|Bacteria,4NE3Y@976|Bacteroidetes,47MAW@768503|Cytophagia	976|Bacteroidetes	J	Belongs to the class-I aminoacyl-tRNA synthetase family	cysS	GO:0000166,GO:0003674,GO:0003824,GO:0004812,GO:0004817,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006423,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0017076,GO:0019538,GO:0019752,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0034645,GO:0034660,GO:0035639,GO:0036094,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0097159,GO:0097367,GO:0140098,GO:0140101,GO:1901265,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576	6.1.1.16	ko:K01883	ko00970,map00970	M00359,M00360	R03650	RC00055,RC00523	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	-	-	-	DALR_2,tRNA-synt_1e
BYD3_k127_1615109_9	1048983.EL17_16370	7.156e-10	62.0	COG2197@1|root,COG2197@2|Bacteria,4NMX5@976|Bacteroidetes,47PYR@768503|Cytophagia	976|Bacteroidetes	KT	helix_turn_helix, Lux Regulon	-	-	-	-	-	-	-	-	-	-	-	-	GerE,Response_reg
BYD3_k127_1615109_5	1047013.AQSP01000134_gene1347	2.524e-109	383.0	COG0577@1|root,COG0577@2|Bacteria	2|Bacteria	V	efflux transmembrane transporter activity	-	-	-	ko:K02004	-	M00258	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	FtsX,MacB_PCD
BYD3_k127_1615109_7	743722.Sph21_3744	6.337e-81	274.0	COG2197@1|root,COG2197@2|Bacteria,4NMX5@976|Bacteroidetes,1IXU1@117747|Sphingobacteriia	976|Bacteroidetes	K	SMART Signal transduction response regulator, receiver	-	-	-	-	-	-	-	-	-	-	-	-	GerE,Response_reg
BYD3_k127_1615109_1	743722.Sph21_3745	1.12e-146	485.0	COG4585@1|root,COG4585@2|Bacteria,4NG0M@976|Bacteroidetes,1IV2W@117747|Sphingobacteriia	976|Bacteroidetes	T	Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor	narQ	-	-	-	-	-	-	-	-	-	-	-	HATPase_c,HisKA_3,PAS_9,PilJ
BYD3_k127_1615109_6	760192.Halhy_0868	7.647e-109	357.0	28P7W@1|root,2ZC23@2|Bacteria,4NNAG@976|Bacteroidetes	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_1615109_2	1123278.KB893567_gene2080	7.971e-133	426.0	COG1028@1|root,COG1028@2|Bacteria,4NH6R@976|Bacteroidetes,47KYG@768503|Cytophagia	976|Bacteroidetes	IQ	Enoyl-(Acyl carrier protein) reductase	-	-	-	ko:K18333	ko00051,ko01120,map00051,map01120	-	R08926	RC00066	ko00000,ko00001	-	-	-	adh_short_C2
BYD3_k127_1615109_3	1123248.KB893318_gene4095	1.579e-126	409.0	COG3618@1|root,COG3618@2|Bacteria,4NFGB@976|Bacteroidetes,1INSJ@117747|Sphingobacteriia	976|Bacteroidetes	S	PFAM amidohydrolase	-	-	-	ko:K07046	ko00051,ko01120,map00051,map01120	-	R10689	RC00537	ko00000,ko00001,ko01000	-	-	-	Amidohydro_2
BYD3_k127_1615109_8	471854.Dfer_5741	1.103e-47	173.0	COG3254@1|root,COG3254@2|Bacteria,4NQAA@976|Bacteroidetes,47QI3@768503|Cytophagia	976|Bacteroidetes	S	L-rhamnose mutarotase	-	-	5.1.3.32	ko:K03534	-	-	R10819	RC00563	ko00000,ko01000	-	-	-	rhaM
BYD3_k127_1615109_4	925409.KI911562_gene241	1.453e-110	361.0	COG1051@1|root,COG1051@2|Bacteria,4NH28@976|Bacteroidetes,1IP93@117747|Sphingobacteriia	976|Bacteroidetes	F	Nudix hydrolase	-	-	-	-	-	-	-	-	-	-	-	-	NUDIX
BYD3_k127_1615109_0	760192.Halhy_3881	2.954e-219	686.0	COG4146@1|root,COG4146@2|Bacteria,4NE9S@976|Bacteroidetes,1IVD1@117747|Sphingobacteriia	976|Bacteroidetes	S	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family	-	-	-	ko:K03307	-	-	-	-	ko00000	2.A.21	-	-	SSF
BYD3_k127_162095_2	1237149.C900_00026	1.662e-99	333.0	COG1512@1|root,COG1512@2|Bacteria	2|Bacteria	S	TPM domain	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_162095_0	1237149.C900_00028	5.155e-263	826.0	COG0793@1|root,COG0793@2|Bacteria,4NFK4@976|Bacteroidetes,47KAN@768503|Cytophagia	976|Bacteroidetes	M	Belongs to the peptidase S41A family	prc	-	3.4.21.102	ko:K03797	-	-	-	-	ko00000,ko01000,ko01002	-	-	-	DUF3340,PDZ,Peptidase_S41
BYD3_k127_162095_1	1237149.C900_00062	8.453e-241	752.0	COG1131@1|root,COG1131@2|Bacteria,4NHPD@976|Bacteroidetes,47KQD@768503|Cytophagia	976|Bacteroidetes	V	ABC-2 type transporter	-	-	-	-	-	-	-	-	-	-	-	-	ABC2_membrane,ABC_tran,TerB
BYD3_k127_16222_7	1123277.KB893208_gene2818	1.006e-152	484.0	COG0412@1|root,COG0412@2|Bacteria,4NEUX@976|Bacteroidetes,47JGG@768503|Cytophagia	976|Bacteroidetes	Q	dienelactone hydrolase	-	-	3.1.1.45	ko:K01061	ko00361,ko00364,ko00623,ko01100,ko01110,ko01120,ko01130,map00361,map00364,map00623,map01100,map01110,map01120,map01130	-	R03893,R05510,R05511,R06835,R06838,R08120,R08121,R09136,R09220,R09222	RC01018,RC01906,RC01907,RC02441,RC02467,RC02468,RC02674,RC02675,RC02686	ko00000,ko00001,ko01000	-	-	-	DLH
BYD3_k127_16222_17	1237149.C900_04324	5.162e-67	235.0	COG2114@1|root,COG2114@2|Bacteria	2|Bacteria	T	Pfam Adenylate and Guanylate cyclase catalytic domain	-	-	4.6.1.1	ko:K01768	ko00230,ko02025,ko04113,ko04213,map00230,map02025,map04113,map04213	M00695	R00089,R00434	RC00295	ko00000,ko00001,ko00002,ko01000	-	-	-	CHASE2,Guanylate_cyc
BYD3_k127_16222_20	1317122.ATO12_18620	4.15e-32	130.0	2BVXR@1|root,32QYG@2|Bacteria,4NQMX@976|Bacteroidetes,1I3BN@117743|Flavobacteriia,2YJQZ@290174|Aquimarina	976|Bacteroidetes	S	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase	-	-	-	-	-	-	-	-	-	-	-	-	DoxX
BYD3_k127_16222_19	1121104.AQXH01000001_gene1479	2.073e-42	159.0	2EHC3@1|root,33B3Y@2|Bacteria,4NZPQ@976|Bacteroidetes	976|Bacteroidetes	S	Protein of unknown function (DUF1761)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1761
BYD3_k127_16222_11	760192.Halhy_3568	3.367e-114	377.0	COG1082@1|root,COG1082@2|Bacteria,4PJ9G@976|Bacteroidetes,1IZP5@117747|Sphingobacteriia	976|Bacteroidetes	G	Xylose isomerase-like TIM barrel	-	-	4.2.1.44	ko:K03335	ko00562,ko01100,ko01120,map00562,map01100,map01120	-	R02782,R05659	RC00782,RC01448	ko00000,ko00001,ko01000	-	-	-	AP_endonuc_2
BYD3_k127_16222_0	760192.Halhy_5001	2.475e-229	715.0	COG1788@1|root,COG2057@1|root,COG1788@2|Bacteria,COG2057@2|Bacteria,4NG9J@976|Bacteroidetes,1IWMZ@117747|Sphingobacteriia	976|Bacteroidetes	I	Coenzyme A transferase	-	-	2.8.3.5,2.8.3.8,2.8.3.9	ko:K01027,ko:K01035	ko00072,ko00280,ko00310,ko00627,ko00640,ko00650,ko01100,ko01120,ko02020,map00072,map00280,map00310,map00627,map00640,map00650,map01100,map01120,map02020	-	R00410,R01179,R01359,R01365,R07832	RC00012,RC00014	ko00000,ko00001,ko01000	-	-	-	CoA_trans
BYD3_k127_16222_16	1123278.KB893500_gene205	3.583e-68	236.0	COG3485@1|root,COG3485@2|Bacteria,4NMB4@976|Bacteroidetes,47PAV@768503|Cytophagia	976|Bacteroidetes	Q	TIGRFAM Protocatechuate 3,4-dioxygenase, alpha subunit	-	-	1.13.11.3	ko:K00448	ko00362,ko00624,ko01100,ko01120,ko01220,map00362,map00624,map01100,map01120,map01220	-	R01631,R03549	RC00388,RC00953	br01602,ko00000,ko00001,ko01000	-	-	-	Dioxygenase_C
BYD3_k127_16222_9	1123276.KB893301_gene4147	7.999e-122	394.0	COG3485@1|root,COG3485@2|Bacteria,4NDXN@976|Bacteroidetes,47M90@768503|Cytophagia	976|Bacteroidetes	Q	Protocatechuate 3,4-dioxygenase beta subunit N terminal	-	-	1.13.11.3	ko:K00449	ko00362,ko00624,ko01100,ko01120,ko01220,map00362,map00624,map01100,map01120,map01220	-	R01631,R03549	RC00388,RC00953	br01602,ko00000,ko00001,ko01000	-	-	-	Dioxygenase_C,PCDO_beta_N
BYD3_k127_16222_18	760192.Halhy_5004	3.296e-47	172.0	COG0596@1|root,COG0599@1|root,COG0596@2|Bacteria,COG0599@2|Bacteria,4NF5F@976|Bacteroidetes,1IYR3@117747|Sphingobacteriia	976|Bacteroidetes	S	Ndr family	-	-	3.1.1.24,4.1.1.44	ko:K01055,ko:K14727	ko00362,ko01100,ko01120,ko01220,map00362,map01100,map01120,map01220	M00568	R02991,R03470	RC00825,RC00938	ko00000,ko00001,ko00002,ko01000	-	-	-	Abhydrolase_1,CMD
BYD3_k127_16222_15	1041142.ATTP01000012_gene851	4.827e-73	254.0	COG2267@1|root,COG2267@2|Bacteria,1MX0N@1224|Proteobacteria,2TVZ2@28211|Alphaproteobacteria,4B7J9@82115|Rhizobiaceae	28211|Alphaproteobacteria	I	hydrolases or acyltransferases (alpha beta hydrolase superfamily)	pcaD	-	3.1.1.24,4.1.1.44	ko:K01055,ko:K14727	ko00362,ko01100,ko01120,ko01220,map00362,map01100,map01120,map01220	M00568	R02991,R03470	RC00825,RC00938	ko00000,ko00001,ko00002,ko01000	-	-	-	Abhydrolase_1,Abhydrolase_6,CMD
BYD3_k127_16222_8	1358423.N180_14675	3.071e-136	446.0	COG2271@1|root,COG2271@2|Bacteria,4NE7R@976|Bacteroidetes,1IUWD@117747|Sphingobacteriia	976|Bacteroidetes	G	PFAM Major Facilitator Superfamily	-	-	-	ko:K08191	-	-	-	-	ko00000,ko02000	2.A.1.14.2	-	-	MFS_1
BYD3_k127_16222_6	760192.Halhy_5005	1.165e-168	537.0	COG0654@1|root,COG0654@2|Bacteria,4NHEE@976|Bacteroidetes,1IQ0F@117747|Sphingobacteriia	976|Bacteroidetes	C	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent	-	-	1.14.13.2	ko:K00481	ko00362,ko01100,ko01120,ko01220,map00362,map01100,map01120,map01220	-	R01298	RC00046	ko00000,ko00001,ko01000	-	-	-	FAD_binding_3
BYD3_k127_16222_14	443152.MDG893_15095	8.554e-74	261.0	COG0015@1|root,COG0015@2|Bacteria,1MXNN@1224|Proteobacteria,1RS00@1236|Gammaproteobacteria,465DC@72275|Alteromonadaceae	1236|Gammaproteobacteria	F	Adenylosuccinate lyase C-terminus	pcaB	GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464	5.5.1.2	ko:K01857	ko00362,ko01100,ko01120,ko01220,map00362,map01100,map01120,map01220	-	R03307	RC00902	ko00000,ko00001,ko01000	-	-	-	ADSL_C,Lyase_1
BYD3_k127_16222_5	1123276.KB893301_gene4140	4.884e-170	535.0	COG2159@1|root,COG2159@2|Bacteria,4NJP9@976|Bacteroidetes,47P2R@768503|Cytophagia	976|Bacteroidetes	S	Amidohydrolase	-	-	-	ko:K07045	-	-	-	-	ko00000	-	-	-	Amidohydro_2
BYD3_k127_16222_4	1123277.KB893185_gene2965	1.816e-171	545.0	COG2267@1|root,COG2267@2|Bacteria,4NH5A@976|Bacteroidetes,47NQ8@768503|Cytophagia	976|Bacteroidetes	I	Alpha/beta hydrolase family	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_16222_3	1123276.KB893301_gene4139	2.916e-188	594.0	COG0620@1|root,COG0620@2|Bacteria,4NJAH@976|Bacteroidetes,47MCD@768503|Cytophagia	976|Bacteroidetes	E	PFAM Methionine synthase vitamin-B12 independent	-	-	2.1.1.14	ko:K00549	ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230	M00017	R04405,R09365	RC00035,RC00113,RC01241	ko00000,ko00001,ko00002,ko01000	-	-	-	Meth_synt_2
BYD3_k127_16222_13	189753.AXAS01000003_gene4581	9.319e-94	313.0	COG1028@1|root,COG1028@2|Bacteria,1MUBQ@1224|Proteobacteria,2TRPN@28211|Alphaproteobacteria,3JU36@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	IQ	Belongs to the short-chain dehydrogenases reductases (SDR) family	MA20_18715	-	-	-	-	-	-	-	-	-	-	-	adh_short
BYD3_k127_16222_1	760192.Halhy_0463	8.382e-218	693.0	COG0318@1|root,COG0318@2|Bacteria,4PN9Z@976|Bacteroidetes	976|Bacteroidetes	IQ	AMP-dependent synthetase and ligase	-	-	6.2.1.34	ko:K12508	-	-	-	-	ko00000,ko01000	-	-	-	AMP-binding
BYD3_k127_16222_10	929562.Emtol_1593	7.999e-115	375.0	COG1024@1|root,COG1024@2|Bacteria,4NJSM@976|Bacteroidetes,47JWR@768503|Cytophagia	976|Bacteroidetes	I	Enoyl-CoA hydratase/isomerase	-	-	4.2.1.155	ko:K20036	ko00920,map00920	-	R10936	RC00004,RC03306,RC03307	ko00000,ko00001,ko01000	-	-	-	ECH_1
BYD3_k127_16222_2	760192.Halhy_0466	4.801e-210	668.0	COG1960@1|root,COG1960@2|Bacteria,4NEM4@976|Bacteroidetes	976|Bacteroidetes	I	acyl-CoA dehydrogenase domain protein	-	-	1.3.8.1	ko:K00248	ko00071,ko00280,ko00650,ko01100,ko01110,ko01120,ko01200,ko01212,map00071,map00280,map00650,map01100,map01110,map01120,map01200,map01212	-	R01175,R01178,R02661,R03172,R04751	RC00052,RC00068,RC00076,RC00120,RC00148	ko00000,ko00001,ko01000	-	-	-	Acyl-CoA_dh_1,Acyl-CoA_dh_C,Acyl-CoA_dh_M,Acyl-CoA_dh_N,AcylCoA_DH_N
BYD3_k127_16222_12	760192.Halhy_0461	3.453e-111	368.0	COG2223@1|root,COG2223@2|Bacteria,4PP10@976|Bacteroidetes	976|Bacteroidetes	P	Major Facilitator Superfamily	-	-	-	-	-	-	-	-	-	-	-	-	MFS_1
BYD3_k127_1635550_4	1237149.C900_03245	1.529e-58	207.0	COG4152@1|root,COG4152@2|Bacteria,4NEJE@976|Bacteroidetes,47KYF@768503|Cytophagia	976|Bacteroidetes	S	PFAM ABC transporter	natA	-	-	ko:K01990	-	M00254	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	ABC_tran,DUF4162
BYD3_k127_1635550_2	1237149.C900_03246	3.048e-81	278.0	COG1668@1|root,COG1668@2|Bacteria,4NFSZ@976|Bacteroidetes,47JCK@768503|Cytophagia	976|Bacteroidetes	CP	COGs COG1668 ABC-type Na efflux pump permease component	natB	-	-	ko:K01992	-	M00254	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	ABC2_membrane_3
BYD3_k127_1635550_3	1237149.C900_03246	1.431e-64	224.0	COG1668@1|root,COG1668@2|Bacteria,4NFSZ@976|Bacteroidetes,47JCK@768503|Cytophagia	976|Bacteroidetes	CP	COGs COG1668 ABC-type Na efflux pump permease component	natB	-	-	ko:K01992	-	M00254	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	ABC2_membrane_3
BYD3_k127_1635550_1	1237149.C900_03247	2.722e-160	515.0	COG4191@1|root,COG4191@2|Bacteria,4NEMP@976|Bacteroidetes,47Y3V@768503|Cytophagia	976|Bacteroidetes	T	PFAM Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase	vicK	-	-	-	-	-	-	-	-	-	-	-	HATPase_c
BYD3_k127_1635550_0	1237149.C900_03248	1.216e-287	888.0	COG0055@1|root,COG0055@2|Bacteria,4NF1Q@976|Bacteroidetes,47KRX@768503|Cytophagia	976|Bacteroidetes	C	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits	atpD	-	3.6.3.14	ko:K02112	ko00190,ko00195,ko01100,map00190,map00195,map01100	M00157	-	-	ko00000,ko00001,ko00002,ko00194,ko01000	3.A.2.1	-	-	ATP-synt_ab,ATP-synt_ab_N
BYD3_k127_1635550_5	1237149.C900_03249	4.553e-26	109.0	COG0355@1|root,COG0355@2|Bacteria	2|Bacteria	C	proton-transporting ATP synthase activity, rotational mechanism	atpC	GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0005886,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0008324,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015399,GO:0015405,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016462,GO:0016469,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0032991,GO:0033178,GO:0034220,GO:0034641,GO:0034654,GO:0042623,GO:0042625,GO:0042626,GO:0043492,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0044769,GO:0045259,GO:0045260,GO:0045261,GO:0045262,GO:0046034,GO:0046390,GO:0046483,GO:0046933,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0071944,GO:0072521,GO:0072522,GO:0090407,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0098797,GO:0099131,GO:0099132,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600	-	ko:K02114	ko00190,ko00195,ko01100,map00190,map00195,map01100	M00157	-	-	ko00000,ko00001,ko00002,ko00194	3.A.2.1	-	iHN637.CLJU_RS01195,iJN746.PP_5412,iSbBS512_1146.SbBS512_E4190	ATP-synt_DE,ATP-synt_DE_N
BYD3_k127_1645160_9	1047013.AQSP01000134_gene1344	1.633e-21	98.0	COG0153@1|root,COG0153@2|Bacteria,2NNYM@2323|unclassified Bacteria	2|Bacteria	G	Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)	galK	-	2.7.1.6	ko:K00849	ko00052,ko00520,ko01100,map00052,map00520,map01100	M00554,M00632	R01092	RC00002,RC00078	ko00000,ko00001,ko00002,ko01000,ko04147	-	-	-	GHMP_kinases_C,GHMP_kinases_N,GalKase_gal_bdg
BYD3_k127_1645160_4	1124780.ANNU01000008_gene2664	1.014e-106	355.0	COG1609@1|root,COG1609@2|Bacteria,4NDW6@976|Bacteroidetes,47ME3@768503|Cytophagia	976|Bacteroidetes	K	PFAM Periplasmic binding protein LacI transcriptional regulator	-	-	-	ko:K02529,ko:K05499	-	-	-	-	ko00000,ko03000	-	-	-	LacI,Peripla_BP_1,Peripla_BP_3
BYD3_k127_1645160_5	643867.Ftrac_0790	2.997e-75	254.0	COG0229@1|root,COG0229@2|Bacteria,4NQEY@976|Bacteroidetes,47PZ4@768503|Cytophagia	976|Bacteroidetes	O	peptide methionine sulfoxide reductase	msrB	-	1.8.4.12	ko:K07305	-	-	-	-	ko00000,ko01000	-	-	-	PMSR,SelR
BYD3_k127_1645160_1	1122226.AUHX01000005_gene2341	1.737e-149	478.0	COG0015@1|root,COG0015@2|Bacteria,4NFY8@976|Bacteroidetes,1HXVA@117743|Flavobacteriia	976|Bacteroidetes	F	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily	purB	-	4.3.2.2	ko:K01756	ko00230,ko00250,ko01100,ko01110,ko01130,map00230,map00250,map01100,map01110,map01130	M00048,M00049	R01083,R04559	RC00379,RC00444,RC00445	ko00000,ko00001,ko00002,ko01000	-	-	-	ADSL_C,ASL_C,Lyase_1
BYD3_k127_1645160_7	471854.Dfer_3540	1.436e-38	147.0	COG0015@1|root,COG0015@2|Bacteria,4NFY8@976|Bacteroidetes,47KAQ@768503|Cytophagia	976|Bacteroidetes	F	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily	purB	-	4.3.2.2	ko:K01756	ko00230,ko00250,ko01100,ko01110,ko01130,map00230,map00250,map01100,map01110,map01130	M00048,M00049	R01083,R04559	RC00379,RC00444,RC00445	ko00000,ko00001,ko00002,ko01000	-	-	-	ADSL_C,ASL_C,Lyase_1
BYD3_k127_1645160_0	1237149.C900_05610	5.392e-172	546.0	COG1018@1|root,COG1018@2|Bacteria,4NF24@976|Bacteroidetes,47KY6@768503|Cytophagia	976|Bacteroidetes	C	PFAM 2Fe-2S iron-sulfur cluster binding domain	dmpP	-	-	ko:K02613	ko00360,ko01120,map00360,map01120	-	R09838	RC02690	ko00000,ko00001	-	-	-	FAD_binding_6,Fer2,NAD_binding_1
BYD3_k127_1645160_2	1122605.KB893647_gene312	3.142e-124	406.0	COG0053@1|root,COG0053@2|Bacteria,4NEID@976|Bacteroidetes,1IP0G@117747|Sphingobacteriia	976|Bacteroidetes	P	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family	fieF	-	-	-	-	-	-	-	-	-	-	-	Cation_efflux,ZT_dimer
BYD3_k127_1645160_10	761193.Runsl_1053	2.883e-08	59.0	2ED1I@1|root,336YH@2|Bacteria,4NUYR@976|Bacteroidetes,47SW5@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_1645160_3	1121904.ARBP01000005_gene4607	3.6e-119	391.0	COG3386@1|root,COG3386@2|Bacteria,4NIMX@976|Bacteroidetes,47KMQ@768503|Cytophagia	976|Bacteroidetes	G	PFAM SMP-30 Gluconolaconase	-	-	3.1.1.17	ko:K01053	ko00030,ko00053,ko00930,ko01100,ko01110,ko01120,ko01130,ko01200,ko01220,map00030,map00053,map00930,map01100,map01110,map01120,map01130,map01200,map01220	M00129	R01519,R02933,R03751	RC00537,RC00983	ko00000,ko00001,ko00002,ko01000,ko04147	-	-	-	SGL
BYD3_k127_1645160_6	1121904.ARBP01000011_gene1451	2.424e-55	201.0	29R44@1|root,30C5C@2|Bacteria,4NN15@976|Bacteroidetes,47PN2@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_1645160_8	617140.AJZE01000079_gene1749	2.309e-23	104.0	COG3193@1|root,COG3193@2|Bacteria,1N5PP@1224|Proteobacteria,1SC3A@1236|Gammaproteobacteria,1XY13@135623|Vibrionales	135623|Vibrionales	S	Haem-degrading	-	-	-	-	-	-	-	-	-	-	-	-	Haem_degrading
BYD3_k127_1650676_4	525373.HMPREF0766_13077	1.951e-100	338.0	COG0845@1|root,COG0845@2|Bacteria,4NF23@976|Bacteroidetes,1IS62@117747|Sphingobacteriia	976|Bacteroidetes	M	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family	-	-	-	-	-	-	-	-	-	-	-	-	Biotin_lipoyl_2,HlyD_3,HlyD_D23
BYD3_k127_1650676_0	755732.Fluta_2560	0.0	1373.0	COG0841@1|root,COG0841@2|Bacteria,4NDZG@976|Bacteroidetes,1HX2H@117743|Flavobacteriia	976|Bacteroidetes	V	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family	-	-	-	-	-	-	-	-	-	-	-	-	ACR_tran
BYD3_k127_1650676_2	471854.Dfer_1607	4.972e-207	693.0	COG0745@1|root,COG3292@1|root,COG5002@1|root,COG0745@2|Bacteria,COG3292@2|Bacteria,COG5002@2|Bacteria,4P0IA@976|Bacteroidetes,47TR0@768503|Cytophagia	976|Bacteroidetes	T	Y_Y_Y domain	-	-	-	-	-	-	-	-	-	-	-	-	HATPase_c,HTH_18,HisKA,Response_reg,Y_Y_Y
BYD3_k127_1650676_9	1121007.AUML01000017_gene387	4.963e-28	123.0	COG3637@1|root,COG3637@2|Bacteria,4PKKK@976|Bacteroidetes,1HYEJ@117743|Flavobacteriia,2YJUI@290174|Aquimarina	976|Bacteroidetes	M	Protein of unknown function (DUF2490)	-	-	-	-	-	-	-	-	-	-	-	-	DUF2490
BYD3_k127_1650676_5	991.IW20_00605	7.144e-70	241.0	29F7N@1|root,3025B@2|Bacteria,4NNR8@976|Bacteroidetes,1I26I@117743|Flavobacteriia,2NW2S@237|Flavobacterium	976|Bacteroidetes	O	serine protease	-	-	-	-	-	-	-	-	-	-	-	-	NfeD
BYD3_k127_1650676_1	1121373.KB903643_gene3644	2.678e-261	812.0	COG2268@1|root,COG2268@2|Bacteria,4NIH3@976|Bacteroidetes,47TCM@768503|Cytophagia	976|Bacteroidetes	S	prohibitin homologues	yqiK	-	-	ko:K07192	ko04910,map04910	-	-	-	ko00000,ko00001,ko03036,ko04131,ko04147	-	-	-	Band_7,Flot
BYD3_k127_1650676_3	1121011.AUCB01000016_gene4007	7.671e-191	606.0	COG0467@1|root,COG0467@2|Bacteria,4NKD2@976|Bacteroidetes,1I7AB@117743|Flavobacteriia	976|Bacteroidetes	T	KaiC	-	-	-	ko:K08482	-	-	-	-	ko00000	-	-	-	ATPase
BYD3_k127_1650676_7	1121011.AUCB01000016_gene4006	2.702e-45	166.0	COG4251@1|root,COG4251@2|Bacteria,4NSP2@976|Bacteroidetes,1I9GZ@117743|Flavobacteriia	976|Bacteroidetes	T	Decreases the phosphorylation of KaiC, a component of the main circadian regulator in cyanobacteria	-	-	-	ko:K08481	-	-	-	-	ko00000	-	-	-	KaiB
BYD3_k127_1650676_8	1121011.AUCB01000016_gene4005	1.543e-36	140.0	COG4251@1|root,COG4251@2|Bacteria,4NTN4@976|Bacteroidetes	976|Bacteroidetes	T	KaiB	-	-	-	ko:K08481	-	-	-	-	ko00000	-	-	-	KaiB
BYD3_k127_1650676_6	1121011.AUCB01000016_gene4004	1.087e-50	191.0	COG4251@1|root,COG4251@2|Bacteria,4NK2S@976|Bacteroidetes,1IINZ@117743|Flavobacteriia	976|Bacteroidetes	T	Histidine kinase	-	-	-	-	-	-	-	-	-	-	-	-	HATPase_c,HisKA,PAS,PAS_4,PAS_9
BYD3_k127_1677768_3	1123278.KB893581_gene975	1.685e-126	426.0	COG0577@1|root,COG0577@2|Bacteria,4NDUK@976|Bacteroidetes,47JJN@768503|Cytophagia	976|Bacteroidetes	V	FtsX-like permease family	-	-	-	ko:K02004	-	M00258	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	FtsX,MacB_PCD
BYD3_k127_1677768_0	760192.Halhy_3908	7.436e-308	963.0	COG0577@1|root,COG0577@2|Bacteria,4NDUK@976|Bacteroidetes	976|Bacteroidetes	V	permease	-	-	-	-	-	-	-	-	-	-	-	-	FtsX,MacB_PCD
BYD3_k127_1677768_2	1120966.AUBU01000005_gene3844	1.489e-208	674.0	COG0577@1|root,COG0577@2|Bacteria,4NDUK@976|Bacteroidetes,47NN0@768503|Cytophagia	976|Bacteroidetes	V	MacB-like periplasmic core domain	-	-	-	ko:K02004	-	M00258	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	FtsX,MacB_PCD
BYD3_k127_1677768_1	929556.Solca_3967	4.122e-240	768.0	COG3525@1|root,COG3525@2|Bacteria,4NE08@976|Bacteroidetes,1IR9D@117747|Sphingobacteriia	976|Bacteroidetes	G	hydrolase family 20, catalytic	-	-	3.2.1.52	ko:K12373	ko00511,ko00513,ko00520,ko00531,ko00603,ko00604,ko01100,ko04142,map00511,map00513,map00520,map00531,map00603,map00604,map01100,map04142	M00079	R00022,R06004,R11316	RC00049	ko00000,ko00001,ko00002,ko01000,ko03110	-	GH20	-	CHB_HEX,CHB_HEX_C,Glyco_hydro_20,Glyco_hydro_20b
BYD3_k127_1677768_4	714943.Mucpa_2494	1.678e-24	107.0	2DZKQ@1|root,32VDA@2|Bacteria,4NSEZ@976|Bacteroidetes,1ITDV@117747|Sphingobacteriia	976|Bacteroidetes	S	Psort location Cytoplasmic, score 8.96	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_1677768_5	1123234.AUKI01000011_gene1438	2.368e-22	98.0	COG1331@1|root,COG1331@2|Bacteria,4NFE2@976|Bacteroidetes,1HWWU@117743|Flavobacteriia	976|Bacteroidetes	O	Highly conserved protein containing a thioredoxin domain	-	-	-	ko:K06888	-	-	-	-	ko00000	-	-	-	GlcNAc_2-epim,Thioredox_DsbH
BYD3_k127_1679385_3	1121904.ARBP01000038_gene2567	7.394e-112	369.0	COG1940@1|root,COG1940@2|Bacteria,4NHNJ@976|Bacteroidetes	976|Bacteroidetes	GK	rok family	-	-	2.7.1.2	ko:K00845	ko00010,ko00052,ko00500,ko00520,ko00521,ko00524,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00052,map00500,map00520,map00521,map00524,map01100,map01110,map01120,map01130,map01200	M00001,M00549	R00299,R01600,R01786	RC00002,RC00017	ko00000,ko00001,ko00002,ko01000	-	-	-	ROK
BYD3_k127_1679385_2	485917.Phep_0680	1.511e-118	392.0	COG0738@1|root,COG0738@2|Bacteria,4NHZ7@976|Bacteroidetes,1INTY@117747|Sphingobacteriia	976|Bacteroidetes	G	Sugar (and other) transporter	-	-	-	-	-	-	-	-	-	-	-	-	MFS_1,Sugar_tr
BYD3_k127_1679385_1	485917.Phep_0681	5.479e-147	467.0	COG4821@1|root,COG4821@2|Bacteria,4NHQW@976|Bacteroidetes,1ITT0@117747|Sphingobacteriia	976|Bacteroidetes	S	SIS domain	-	-	-	-	-	-	-	-	-	-	-	-	SIS_2
BYD3_k127_1679385_5	929562.Emtol_1770	6.673e-78	268.0	COG0500@1|root,COG2226@2|Bacteria,4NJR0@976|Bacteroidetes,47PVG@768503|Cytophagia	976|Bacteroidetes	Q	Nodulation protein S (NodS)	-	-	-	-	-	-	-	-	-	-	-	-	Methyltransf_31
BYD3_k127_1679385_6	313606.M23134_05410	9.496e-51	192.0	COG2242@1|root,COG2242@2|Bacteria,4PMEA@976|Bacteroidetes	976|Bacteroidetes	H	Methyltransferase FkbM domain	-	-	-	-	-	-	-	-	-	-	-	-	Methyltransf_21
BYD3_k127_1679385_0	1123248.KB893329_gene4433	5.54e-192	607.0	COG0673@1|root,COG0673@2|Bacteria,4NF9M@976|Bacteroidetes,1IR8X@117747|Sphingobacteriia	976|Bacteroidetes	S	Oxidoreductase family, NAD-binding Rossmann fold	-	-	-	-	-	-	-	-	-	-	-	-	GFO_IDH_MocA
BYD3_k127_1679385_4	1267535.KB906767_gene4999	6.434e-105	346.0	COG2133@1|root,COG2133@2|Bacteria	2|Bacteria	G	pyrroloquinoline quinone binding	-	-	3.2.1.51	ko:K01206	ko00511,map00511	-	-	-	ko00000,ko00001,ko01000,ko04147	-	GH29	-	Alpha_L_fucos,Calx-beta,CarboxypepD_reg,DUF1080,F5_F8_type_C,G5,G8,Glyco_hyd_101C,Glyco_hydro_101,Trypsin_2,YSIRK_signal,fn3
BYD3_k127_1679385_7	1121904.ARBP01000048_gene4111	4.345e-45	170.0	COG0457@1|root,COG5616@1|root,COG0457@2|Bacteria,COG5616@2|Bacteria	2|Bacteria	S	cAMP biosynthetic process	-	-	2.1.1.72	ko:K07316	-	-	-	-	ko00000,ko01000,ko02048	-	-	-	N6_N4_Mtase,PAS_3,TPR_8
BYD3_k127_1685670_0	1237149.C900_05403	2.738e-50	203.0	COG0457@1|root,COG4995@1|root,COG0457@2|Bacteria,COG4995@2|Bacteria,4NKPZ@976|Bacteroidetes	976|Bacteroidetes	S	Tetratricopeptide TPR_1 repeat-containing protein	-	-	-	-	-	-	-	-	-	-	-	-	CHAT,TPR_10,TPR_12,TPR_7,TPR_8
BYD3_k127_1685670_1	504472.Slin_0957	4.044e-30	125.0	COG4244@1|root,COG4244@2|Bacteria,4NG6K@976|Bacteroidetes,47K0Y@768503|Cytophagia	976|Bacteroidetes	G	Protein of unknown function (DUF1549)	-	-	-	-	-	-	-	-	-	-	-	-	PSCyt1,PSCyt2,PSD1
BYD3_k127_1685816_3	269798.CHU_3180	6.981e-58	203.0	COG0245@1|root,COG0245@2|Bacteria,4NP0N@976|Bacteroidetes,47PDR@768503|Cytophagia	976|Bacteroidetes	I	Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP)	ispF	-	4.6.1.12	ko:K01770	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	M00096	R05637	RC00002,RC01440	ko00000,ko00001,ko00002,ko01000	-	-	-	YgbB
BYD3_k127_1685816_1	1237149.C900_01768	4.155e-184	583.0	COG0612@1|root,COG0612@2|Bacteria,4NEDZ@976|Bacteroidetes,47JGY@768503|Cytophagia	976|Bacteroidetes	S	PFAM Peptidase M16 inactive domain	-	-	-	ko:K07263	-	-	-	-	ko00000,ko01000,ko01002	-	-	-	Peptidase_M16,Peptidase_M16_C
BYD3_k127_1685816_0	1237149.C900_01769	7.136e-317	980.0	COG0022@1|root,COG1071@1|root,COG0022@2|Bacteria,COG1071@2|Bacteria,4NE71@976|Bacteroidetes,47KFY@768503|Cytophagia	976|Bacteroidetes	C	Pyruvate 2-oxoglutarate dehydrogenase complex, dehydrogenase component beta subunit	bfmBA	-	1.2.4.4	ko:K11381	ko00280,ko00640,ko01100,ko01110,ko01130,map00280,map00640,map01100,map01110,map01130	M00036	R07599,R07600,R07601,R07602,R07603,R07604,R10996,R10997	RC00027,RC00627,RC02743,RC02883,RC02949,RC02953	br01601,ko00000,ko00001,ko00002,ko01000	-	-	-	E1_dh,Transket_pyr,Transketolase_C
BYD3_k127_1685816_5	929562.Emtol_4262	1.222e-30	125.0	COG3118@1|root,COG3118@2|Bacteria,4NSE6@976|Bacteroidetes,47R3Q@768503|Cytophagia	976|Bacteroidetes	O	TIGRFAM bacillithiol system protein YtxJ	ytxJ	-	-	-	-	-	-	-	-	-	-	-	DUF2847
BYD3_k127_1685816_4	1237149.C900_01772	2.17e-37	142.0	COG1765@1|root,COG1765@2|Bacteria,4NQ66@976|Bacteroidetes,47QCI@768503|Cytophagia	976|Bacteroidetes	O	redox protein regulator of disulfide bond formation	osmC	-	-	-	-	-	-	-	-	-	-	-	OsmC
BYD3_k127_1685816_6	929556.Solca_4376	3.778e-08	56.0	COG1765@1|root,COG1765@2|Bacteria,4NQ66@976|Bacteroidetes,1ISTX@117747|Sphingobacteriia	976|Bacteroidetes	O	PFAM OsmC-like protein	osmC	-	-	-	-	-	-	-	-	-	-	-	OsmC
BYD3_k127_1686931_0	1237149.C900_05632	0.0	1311.0	COG1572@1|root,COG1572@2|Bacteria,4NFAX@976|Bacteroidetes,47K9M@768503|Cytophagia	976|Bacteroidetes	S	Peptidase family C25	-	-	-	-	-	-	-	-	-	-	-	-	CARDB,FlgD_ig,ILEI,Peptidase_C25
BYD3_k127_1686931_8	1120951.AUBG01000007_gene71	5.922e-15	79.0	2ENN4@1|root,33G9F@2|Bacteria,4NZBT@976|Bacteroidetes,1I6CW@117743|Flavobacteriia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_1686931_6	485918.Cpin_6557	1.141e-102	341.0	COG1246@1|root,COG1246@2|Bacteria,4NGXY@976|Bacteroidetes	976|Bacteroidetes	E	Acetyltransferase	-	-	-	-	-	-	-	-	-	-	-	-	Acetyltransf_1
BYD3_k127_1686931_1	925409.KI911562_gene429	1.122e-207	650.0	COG0137@1|root,COG0137@2|Bacteria,4NE3R@976|Bacteroidetes,1INXV@117747|Sphingobacteriia	976|Bacteroidetes	E	Belongs to the argininosuccinate synthase family. Type 1 subfamily	argG	-	6.3.4.5	ko:K01940	ko00220,ko00250,ko01100,ko01110,ko01130,ko01230,ko05418,map00220,map00250,map01100,map01110,map01130,map01230,map05418	M00029,M00844,M00845	R01954	RC00380,RC00629	ko00000,ko00001,ko00002,ko01000,ko04147	-	-	-	Arginosuc_synth
BYD3_k127_1686931_4	485918.Cpin_6555	2.535e-146	469.0	COG0002@1|root,COG0002@2|Bacteria,4NEQR@976|Bacteroidetes,1IPHE@117747|Sphingobacteriia	976|Bacteroidetes	E	Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde	argC	-	1.2.1.38	ko:K00145	ko00220,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map01100,map01110,map01130,map01210,map01230	M00028,M00845	R03443	RC00684	ko00000,ko00001,ko00002,ko01000	-	-	-	Semialdhyde_dh,Semialdhyde_dhC
BYD3_k127_1686931_3	1358423.N180_06085	9.988e-155	497.0	COG4992@1|root,COG4992@2|Bacteria,4NE0Z@976|Bacteroidetes,1IQUC@117747|Sphingobacteriia	976|Bacteroidetes	E	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family	argD	-	2.6.1.11,2.6.1.17	ko:K00821	ko00220,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00220,map00300,map01100,map01110,map01120,map01130,map01210,map01230	M00016,M00028,M00845	R02283,R04475	RC00006,RC00062	ko00000,ko00001,ko00002,ko01000,ko01007	-	-	-	Aminotran_3
BYD3_k127_1686931_2	700598.Niako_5692	3.752e-166	526.0	COG0078@1|root,COG0078@2|Bacteria,4NEYX@976|Bacteroidetes,1IQ2H@117747|Sphingobacteriia	976|Bacteroidetes	E	Belongs to the ATCase OTCase family	argF	GO:0000050,GO:0003674,GO:0003824,GO:0004585,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006591,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016740,GO:0016741,GO:0016743,GO:0019627,GO:0019752,GO:0034641,GO:0042450,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:0071941,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607	2.1.3.11,2.1.3.9	ko:K09065,ko:K13043	ko00220,ko01100,ko01230,map00220,map01100,map01230	M00845	R07245,R08937	RC00096	ko00000,ko00001,ko00002,ko01000	-	-	-	OTCace,OTCace_N
BYD3_k127_1686931_5	1123248.KB893386_gene1816	1.88e-103	342.0	COG0548@1|root,COG0548@2|Bacteria,4NDY8@976|Bacteroidetes,1IPBE@117747|Sphingobacteriia	976|Bacteroidetes	E	Belongs to the acetylglutamate kinase family. ArgB subfamily	argB	GO:0003674,GO:0003824,GO:0003991,GO:0005488,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016301,GO:0016310,GO:0016597,GO:0016740,GO:0016772,GO:0016774,GO:0019752,GO:0031406,GO:0034618,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0043177,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607	2.7.2.8	ko:K00930	ko00220,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map01100,map01110,map01130,map01210,map01230	M00028	R02649	RC00002,RC00043	ko00000,ko00001,ko00002,ko01000	-	-	-	AA_kinase
BYD3_k127_1686931_7	485918.Cpin_6551	1.132e-50	183.0	COG0624@1|root,COG0624@2|Bacteria,4NE2G@976|Bacteroidetes,1IQBT@117747|Sphingobacteriia	976|Bacteroidetes	E	PFAM Peptidase family M20 M25 M40	argE	-	3.5.1.16	ko:K01438	ko00220,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map01100,map01110,map01130,map01210,map01230	M00028,M00845	R00669,R09107	RC00064,RC00300	ko00000,ko00001,ko00002,ko01000	-	-	-	M20_dimer,Peptidase_M20,Peptidase_M28
BYD3_k127_1701479_1	1237149.C900_01547	2.637e-162	524.0	COG0265@1|root,COG0265@2|Bacteria,4NFCS@976|Bacteroidetes,47KF5@768503|Cytophagia	976|Bacteroidetes	O	PDZ domain (Also known as DHR or GLGF)	-	-	-	-	-	-	-	-	-	-	-	-	PDZ_1,PDZ_2,Trypsin_2
BYD3_k127_1701479_2	760192.Halhy_0107	2.67e-141	459.0	COG1092@1|root,COG1092@2|Bacteria,4NG9S@976|Bacteroidetes,1INTU@117747|Sphingobacteriia	976|Bacteroidetes	J	PUA domain containing protein	rlmI	-	2.1.1.191	ko:K06969	-	-	-	-	ko00000,ko01000,ko03009	-	-	-	Methyltrans_SAM
BYD3_k127_1701479_0	1336803.PHEL49_1201	1.173e-193	617.0	COG1473@1|root,COG1473@2|Bacteria,4NEKH@976|Bacteroidetes,1HZT3@117743|Flavobacteriia,3VX1R@52959|Polaribacter	976|Bacteroidetes	S	Peptidase dimerisation domain	-	-	-	ko:K12941	-	-	-	-	ko00000,ko01002	-	-	-	M20_dimer,Peptidase_M20
BYD3_k127_1701479_3	616991.JPOO01000001_gene4356	2.761e-109	362.0	COG0715@1|root,COG0715@2|Bacteria,4NH2X@976|Bacteroidetes,1HYIQ@117743|Flavobacteriia	976|Bacteroidetes	P	Protein of unknown function (DUF3500)	-	-	-	-	-	-	-	-	-	-	-	-	DUF3500
BYD3_k127_1701479_5	1237149.C900_04496	3.342e-51	185.0	COG3350@1|root,COG3350@2|Bacteria,4NRFU@976|Bacteroidetes,47QIJ@768503|Cytophagia	976|Bacteroidetes	S	monooxygenase activity	-	-	-	-	-	-	-	-	-	-	-	-	YHS
BYD3_k127_1701479_6	1237149.C900_04497	3.864e-48	178.0	COG2318@1|root,COG2318@2|Bacteria,4NSP0@976|Bacteroidetes,47R5Z@768503|Cytophagia	976|Bacteroidetes	S	DinB family	-	-	-	-	-	-	-	-	-	-	-	-	DinB,DinB_2
BYD3_k127_1701479_4	504472.Slin_2496	6.396e-104	347.0	COG0189@1|root,COG0189@2|Bacteria,4NH4U@976|Bacteroidetes,47MCV@768503|Cytophagia	976|Bacteroidetes	HJ	ligase activity	-	-	-	-	-	-	-	-	-	-	-	-	RimK
BYD3_k127_1706194_4	1185876.BN8_01016	4.772e-124	407.0	COG4941@1|root,COG4941@2|Bacteria,4NGCS@976|Bacteroidetes,47M8X@768503|Cytophagia	976|Bacteroidetes	K	TIGRFAM RNA polymerase sigma factor, sigma-70 family	-	-	-	ko:K03088	-	-	-	-	ko00000,ko03021	-	-	-	Sigma70_r2,Sigma70_r4_2
BYD3_k127_1706194_9	700598.Niako_0302	7.989e-34	133.0	COG3795@1|root,COG3795@2|Bacteria,4NUTR@976|Bacteroidetes	976|Bacteroidetes	S	YCII-related domain	-	-	-	-	-	-	-	-	-	-	-	-	YCII
BYD3_k127_1706194_2	1150600.ADIARSV_4181	2.327e-155	501.0	COG0738@1|root,COG0738@2|Bacteria,4NEYR@976|Bacteroidetes,1IQ6R@117747|Sphingobacteriia	976|Bacteroidetes	G	Major Facilitator	-	-	-	-	-	-	-	-	-	-	-	-	MFS_1
BYD3_k127_1706194_6	926556.Echvi_1452	2.86e-106	352.0	COG1208@1|root,COG1208@2|Bacteria,4PKJR@976|Bacteroidetes,47Y1U@768503|Cytophagia	976|Bacteroidetes	JM	Nucleotidyl transferase	-	-	-	-	-	-	-	-	-	-	-	-	NTP_transferase
BYD3_k127_1706194_7	1406840.Q763_16235	5.457e-89	301.0	COG3361@1|root,COG3361@2|Bacteria,4NITY@976|Bacteroidetes,1I0CJ@117743|Flavobacteriia,2NUTU@237|Flavobacterium	976|Bacteroidetes	S	Uncharacterized conserved protein (COG2071)	-	-	-	ko:K09166	-	-	-	-	ko00000	-	-	-	DUF2071
BYD3_k127_1706194_5	1237149.C900_01163	4.899e-111	372.0	COG1506@1|root,COG1506@2|Bacteria,4NGW1@976|Bacteroidetes,47MCA@768503|Cytophagia	976|Bacteroidetes	E	Secretory lipase	-	-	-	-	-	-	-	-	-	-	-	-	LIP,Peptidase_S9
BYD3_k127_1706194_8	592029.DDD_2725	2.223e-67	238.0	28HQQ@1|root,2Z7YB@2|Bacteria,4NJCY@976|Bacteroidetes,1HZ05@117743|Flavobacteriia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_1706194_3	1237149.C900_02767	1.219e-145	467.0	COG1600@1|root,COG1600@2|Bacteria,4NFCJ@976|Bacteroidetes,47JAQ@768503|Cytophagia	976|Bacteroidetes	C	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)	queG	-	1.17.99.6	ko:K18979	-	-	-	-	ko00000,ko01000,ko03016	-	-	-	DUF1730,Fer4_16
BYD3_k127_1706194_10	1166018.FAES_0636	4.959e-13	69.0	2A7GX@1|root,30WEH@2|Bacteria,4P9UT@976|Bacteroidetes,47S3Y@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_1706194_0	1237149.C900_02768	7.517e-194	616.0	COG0457@1|root,COG0457@2|Bacteria,4NERG@976|Bacteroidetes,47JE1@768503|Cytophagia	976|Bacteroidetes	S	Oxygen tolerance	-	-	-	-	-	-	-	-	-	-	-	-	BatD
BYD3_k127_1706194_1	1237149.C900_02769	3.857e-179	567.0	COG0082@1|root,COG0082@2|Bacteria,4NDXJ@976|Bacteroidetes,47KB2@768503|Cytophagia	976|Bacteroidetes	E	Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system	aroC	GO:0000166,GO:0003674,GO:0003824,GO:0004107,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009423,GO:0009987,GO:0010181,GO:0016053,GO:0016829,GO:0016835,GO:0016838,GO:0019438,GO:0019752,GO:0032553,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046417,GO:0048037,GO:0050662,GO:0071704,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576	4.2.3.5	ko:K01736	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	M00022	R01714	RC00586	ko00000,ko00001,ko00002,ko01000	-	-	-	Chorismate_synt
BYD3_k127_1706194_11	313606.M23134_00317	1.438e-06	50.0	COG0729@1|root,COG0729@2|Bacteria,4NMUN@976|Bacteroidetes,47Y0X@768503|Cytophagia	976|Bacteroidetes	M	outer membrane protein protective antigen	-	-	-	-	-	-	-	-	-	-	-	-	Bac_surface_Ag
BYD3_k127_1730523_0	1239962.C943_00983	3.066e-151	488.0	COG0025@1|root,COG0025@2|Bacteria,4NM79@976|Bacteroidetes,47U8Y@768503|Cytophagia	976|Bacteroidetes	P	Sodium/hydrogen exchanger family	-	-	-	-	-	-	-	-	-	-	-	-	Na_H_Exchanger
BYD3_k127_1730523_2	1089547.KB913013_gene797	1.363e-39	164.0	28M10@1|root,2ZAFW@2|Bacteria,4NKVC@976|Bacteroidetes,47NHE@768503|Cytophagia	976|Bacteroidetes	S	Domain of unknown function (DUF4403)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4403
BYD3_k127_1730523_1	1239962.C943_00992	1.064e-48	181.0	2C852@1|root,32YB2@2|Bacteria,4NM63@976|Bacteroidetes,47S6T@768503|Cytophagia	976|Bacteroidetes	S	Domain of unknown function (DUF4136)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4136
BYD3_k127_1733642_0	714943.Mucpa_0230	0.0	1133.0	COG3250@1|root,COG3250@2|Bacteria,4NEDF@976|Bacteroidetes,1IP61@117747|Sphingobacteriia	976|Bacteroidetes	G	family 2, TIM barrel	lacZ_2	-	3.2.1.23	ko:K01190	ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100	-	R01105,R01678,R03355,R04783,R06114	RC00049,RC00452	ko00000,ko00001,ko01000	-	-	-	DUF4982,Glyco_hydro_2,Glyco_hydro_2_C,Glyco_hydro_2_N
BYD3_k127_1733642_3	1121904.ARBP01000003_gene6304	5.761e-139	460.0	COG4636@1|root,COG4636@2|Bacteria,4NFKR@976|Bacteroidetes,47K44@768503|Cytophagia	976|Bacteroidetes	S	Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella	-	-	-	-	-	-	-	-	-	-	-	-	VCBS
BYD3_k127_1733642_2	1168289.AJKI01000004_gene2963	7.558e-158	514.0	COG0561@1|root,COG0561@2|Bacteria,4PMH7@976|Bacteroidetes	976|Bacteroidetes	S	SusD family	-	-	-	ko:K21572	-	-	-	-	ko00000,ko02000	8.A.46.1,8.A.46.3	-	-	SusD-like_3,SusD_RagB
BYD3_k127_1733642_5	1168289.AJKI01000004_gene2962	5.627e-117	387.0	COG1629@1|root,COG1629@2|Bacteria,4NDXS@976|Bacteroidetes,2FKYX@200643|Bacteroidia,3XM0Y@558415|Marinilabiliaceae	976|Bacteroidetes	P	Carboxypeptidase regulatory-like domain	-	-	-	-	-	-	-	-	-	-	-	-	CarbopepD_reg_2,Plug,STN,TonB_dep_Rec
BYD3_k127_1733642_1	1168289.AJKI01000004_gene2962	1.369e-183	593.0	COG1629@1|root,COG1629@2|Bacteria,4NDXS@976|Bacteroidetes,2FKYX@200643|Bacteroidia,3XM0Y@558415|Marinilabiliaceae	976|Bacteroidetes	P	Carboxypeptidase regulatory-like domain	-	-	-	-	-	-	-	-	-	-	-	-	CarbopepD_reg_2,Plug,STN,TonB_dep_Rec
BYD3_k127_1733642_4	1089547.KB913013_gene967	3.203e-118	400.0	COG0642@1|root,COG0745@1|root,COG3292@1|root,COG0745@2|Bacteria,COG2205@2|Bacteria,COG3292@2|Bacteria,4NDXU@976|Bacteroidetes,47JBS@768503|Cytophagia	976|Bacteroidetes	T	Two component regulator propeller	-	-	-	-	-	-	-	-	-	-	-	-	HATPase_c,HTH_18,HisKA,Reg_prop,Response_reg,Y_Y_Y
BYD3_k127_174397_9	1244869.H261_10079	1.243e-41	173.0	COG2114@1|root,COG3087@1|root,COG2114@2|Bacteria,COG3087@2|Bacteria,1R86S@1224|Proteobacteria,2U57P@28211|Alphaproteobacteria	28211|Alphaproteobacteria	T	Pfam Adenylate and Guanylate cyclase catalytic domain	-	-	-	-	-	-	-	-	-	-	-	-	DUF4071,Guanylate_cyc
BYD3_k127_174397_3	1250232.JQNJ01000001_gene3316	5.709e-96	329.0	COG1409@1|root,COG1409@2|Bacteria,4NF9K@976|Bacteroidetes,1HY33@117743|Flavobacteriia	976|Bacteroidetes	S	Calcineurin-like phosphoesterase	-	-	-	-	-	-	-	-	-	-	-	-	Metallophos,MetallophosC,MetallophosN
BYD3_k127_174397_7	1237149.C900_05879	9.437e-46	171.0	COG0824@1|root,COG0824@2|Bacteria,4NT54@976|Bacteroidetes,47RRM@768503|Cytophagia	976|Bacteroidetes	S	Thioesterase-like superfamily	-	-	-	-	-	-	-	-	-	-	-	-	4HBT_2
BYD3_k127_174397_10	1408473.JHXO01000009_gene3264	2.605e-41	155.0	COG3682@1|root,COG3682@2|Bacteria,4NP4S@976|Bacteroidetes,2FUPG@200643|Bacteroidia	976|Bacteroidetes	K	Penicillinase repressor	-	-	-	-	-	-	-	-	-	-	-	-	Penicillinase_R
BYD3_k127_174397_5	1408473.JHXO01000009_gene3265	1.959e-55	212.0	COG0739@1|root,COG4219@1|root,COG0739@2|Bacteria,COG4219@2|Bacteria,4NMKI@976|Bacteroidetes,2FYAB@200643|Bacteroidia	976|Bacteroidetes	KT	BlaR1 peptidase M56	-	-	-	-	-	-	-	-	-	-	-	-	POTRA,Peptidase_M23,Peptidase_M56
BYD3_k127_174397_11	402612.FP0402	1.918e-28	130.0	COG0860@1|root,COG0860@2|Bacteria,4NTMW@976|Bacteroidetes,1I4DV@117743|Flavobacteriia,2NWMI@237|Flavobacterium	976|Bacteroidetes	M	Ami_3	-	-	3.5.1.28	ko:K01448	ko01503,map01503	M00727	R04112	RC00064,RC00141	ko00000,ko00001,ko00002,ko01000,ko01011,ko03036	-	-	-	Amidase_3
BYD3_k127_174397_6	1123277.KB893228_gene1944	7.146e-50	179.0	COG1694@1|root,COG1694@2|Bacteria,4NQ3H@976|Bacteroidetes,47QEV@768503|Cytophagia	976|Bacteroidetes	S	PFAM MazG nucleotide pyrophosphohydrolase	ypjD	-	-	-	-	-	-	-	-	-	-	-	MazG
BYD3_k127_174397_0	861299.J421_4478	2.501e-218	689.0	COG1574@1|root,COG1574@2|Bacteria,1ZU9S@142182|Gemmatimonadetes	142182|Gemmatimonadetes	S	Amidohydrolase family	-	-	-	-	-	-	-	-	-	-	-	-	Amidohydro_3
BYD3_k127_174397_2	1123278.KB893466_gene1984	1.581e-140	455.0	COG4299@1|root,COG4299@2|Bacteria,4NDZF@976|Bacteroidetes,47JVV@768503|Cytophagia	976|Bacteroidetes	S	Protein of unknown function (DUF1624)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1624,DUF5009
BYD3_k127_174397_4	1121373.KB903664_gene2550	7.321e-90	301.0	COG2045@1|root,COG2045@2|Bacteria,4NG1A@976|Bacteroidetes,47M1W@768503|Cytophagia	976|Bacteroidetes	H	Belongs to the ComB family	comB	-	3.1.3.71	ko:K05979	ko00680,ko01120,map00680,map01120	M00358	R05789	RC00428	ko00000,ko00001,ko00002,ko01000	-	-	-	2-ph_phosp
BYD3_k127_174397_14	313606.M23134_03681	1.328e-09	67.0	COG0457@1|root,COG0457@2|Bacteria,4NGGZ@976|Bacteroidetes	976|Bacteroidetes	S	tetratricopeptide repeat	-	-	-	-	-	-	-	-	-	-	-	-	TPR_1,TPR_11,TPR_16,TPR_2,TPR_8
BYD3_k127_174397_1	1237149.C900_03998	1.582e-180	570.0	COG0404@1|root,COG0404@2|Bacteria,4NF7S@976|Bacteroidetes,47MN7@768503|Cytophagia	976|Bacteroidetes	E	The glycine cleavage system catalyzes the degradation of glycine	gcvT	-	2.1.2.10	ko:K00605	ko00260,ko00630,ko00670,ko01100,ko01110,ko01130,ko01200,map00260,map00630,map00670,map01100,map01110,map01130,map01200	M00532	R01221,R02300,R04125	RC00022,RC00069,RC00183,RC02834	ko00000,ko00001,ko00002,ko01000	-	-	-	GCV_T,GCV_T_C
BYD3_k127_174397_8	382464.ABSI01000013_gene1825	4.733e-45	172.0	COG1266@1|root,COG1266@2|Bacteria	2|Bacteria	V	CAAX protease self-immunity	-	-	-	ko:K07052	-	-	-	-	ko00000	-	-	-	Abi
BYD3_k127_174397_13	1237149.C900_05487	2.873e-18	89.0	2EG8H@1|root,33A0B@2|Bacteria,4NY1M@976|Bacteroidetes	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_1758327_0	1237149.C900_02546	1.454e-119	394.0	COG1932@1|root,COG1932@2|Bacteria,4PKN4@976|Bacteroidetes,47J9A@768503|Cytophagia	976|Bacteroidetes	EH	Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine	-	-	2.6.1.52	ko:K00831	ko00260,ko00680,ko00750,ko01100,ko01120,ko01130,ko01200,ko01230,map00260,map00680,map00750,map01100,map01120,map01130,map01200,map01230	M00020,M00124	R04173,R05085	RC00006,RC00036	ko00000,ko00001,ko00002,ko01000,ko01007	-	-	-	Aminotran_5
BYD3_k127_1758327_1	926549.KI421517_gene1358	1.894e-82	277.0	COG1595@1|root,COG1595@2|Bacteria,4NMC0@976|Bacteroidetes,47N5B@768503|Cytophagia	976|Bacteroidetes	K	Belongs to the sigma-70 factor family. ECF subfamily	rpoE	-	-	ko:K03088	-	-	-	-	ko00000,ko03021	-	-	-	Sigma70_r2,Sigma70_r4_2
BYD3_k127_1758327_4	761193.Runsl_3662	1.653e-09	64.0	2DKYE@1|root,32UFY@2|Bacteria,4NU6C@976|Bacteroidetes,47R7T@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_1758327_2	1227739.Hsw_1678	8.417e-14	78.0	2DPE1@1|root,331PZ@2|Bacteria,4NV5C@976|Bacteroidetes,47R28@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_1758327_3	1042376.AFPK01000048_gene2834	5.289e-13	79.0	2F4EN@1|root,33X4W@2|Bacteria,4P3J2@976|Bacteroidetes,1I902@117743|Flavobacteriia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_1758327_5	1279009.ADICEAN_02890	6.492e-07	53.0	COG0308@1|root,COG0308@2|Bacteria,4NEXH@976|Bacteroidetes,47JGQ@768503|Cytophagia	976|Bacteroidetes	E	PFAM Peptidase M1, membrane alanine aminopeptidase	-	-	3.4.11.2	ko:K01256	ko00480,ko01100,map00480,map01100	-	R00899,R04951	RC00096,RC00141	ko00000,ko00001,ko01000,ko01002	-	-	-	Peptidase_M1
BYD3_k127_1761239_1	700598.Niako_2567	1.068e-114	379.0	COG0845@1|root,COG0845@2|Bacteria,4NERP@976|Bacteroidetes,1IQN0@117747|Sphingobacteriia	976|Bacteroidetes	M	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family	-	-	-	ko:K03585	ko01501,ko01503,map01501,map01503	M00646,M00647,M00699,M00718	-	-	ko00000,ko00001,ko00002,ko01504,ko02000,ko03036	2.A.6.2,8.A.1.6	-	-	HlyD_D23
BYD3_k127_1761239_0	700598.Niako_2568	0.0	1448.0	COG0841@1|root,COG0841@2|Bacteria,4NDZG@976|Bacteroidetes,1IP63@117747|Sphingobacteriia	976|Bacteroidetes	V	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family	bepE_4	-	-	ko:K03296,ko:K18138	ko01501,ko01503,map01501,map01503	M00647,M00699,M00718	-	-	ko00000,ko00001,ko00002,ko01504,ko02000	2.A.6.2	-	-	ACR_tran
BYD3_k127_1761239_2	700598.Niako_2569	1.439e-107	364.0	COG1538@1|root,COG1538@2|Bacteria,4NEMI@976|Bacteroidetes,1INTW@117747|Sphingobacteriia	976|Bacteroidetes	MU	PFAM Outer membrane efflux protein	-	-	-	-	-	-	-	-	-	-	-	-	OEP
BYD3_k127_1761239_3	1237149.C900_04572	1.463e-22	100.0	COG0005@1|root,COG0005@2|Bacteria,4NE4J@976|Bacteroidetes,47JII@768503|Cytophagia	976|Bacteroidetes	F	The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate	punA	-	2.4.2.1	ko:K03783	ko00230,ko00240,ko00760,ko01100,ko01110,map00230,map00240,map00760,map01100,map01110	-	R01561,R01863,R01969,R02147,R02294,R02295,R02297,R02484,R02557,R02748,R08368,R10244	RC00033,RC00063,RC00122	ko00000,ko00001,ko01000	-	-	-	PNP_UDP_1
BYD3_k127_176897_3	1237149.C900_04331	1.156e-109	358.0	COG1760@1|root,COG1760@2|Bacteria,4NFXU@976|Bacteroidetes,47NN2@768503|Cytophagia	976|Bacteroidetes	E	Serine dehydratase	-	-	4.3.1.17	ko:K01752	ko00260,ko00270,ko01100,ko01110,ko01130,ko01200,ko01230,map00260,map00270,map01100,map01110,map01130,map01200,map01230	-	R00220,R00590	RC00331,RC02600	ko00000,ko00001,ko01000	-	-	-	SDH_beta
BYD3_k127_176897_1	1237149.C900_04332	2.001e-143	469.0	COG1538@1|root,COG1538@2|Bacteria,4NEEN@976|Bacteroidetes,47M95@768503|Cytophagia	976|Bacteroidetes	MU	PFAM Outer membrane efflux protein	-	-	-	ko:K12340	ko01501,ko01503,ko02020,ko03070,ko04626,ko05133,map01501,map01503,map02020,map03070,map04626,map05133	M00325,M00326,M00339,M00571,M00575,M00646,M00647,M00696,M00697,M00709,M00720,M00821	-	-	ko00000,ko00001,ko00002,ko01504,ko02000,ko02044	1.B.17,2.A.6.2	-	-	OEP
BYD3_k127_176897_0	1237149.C900_04333	5.071e-151	490.0	COG0845@1|root,COG0845@2|Bacteria,4NFT4@976|Bacteroidetes,47JF4@768503|Cytophagia	976|Bacteroidetes	M	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family	-	-	-	ko:K02005	-	-	-	-	ko00000	-	-	-	Biotin_lipoyl_2,HlyD_D23,OEP
BYD3_k127_176897_4	906888.JCM19314_1965	3.905e-66	229.0	COG0221@1|root,COG0221@2|Bacteria,4NGBU@976|Bacteroidetes,1HX3R@117743|Flavobacteriia,3HJJI@363408|Nonlabens	976|Bacteroidetes	C	Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions	ppa	-	3.6.1.1	ko:K01507	ko00190,map00190	-	-	-	ko00000,ko00001,ko01000	-	-	-	Pyrophosphatase
BYD3_k127_176897_2	1124780.ANNU01000075_gene835	3.362e-112	373.0	COG0438@1|root,COG0438@2|Bacteria,4NETA@976|Bacteroidetes,47MBB@768503|Cytophagia	976|Bacteroidetes	M	PFAM Glycosyl transferases group 1	-	-	-	-	-	-	-	-	-	-	-	-	Glyco_transf_4,Glycos_transf_1
BYD3_k127_1776007_6	1305737.JAFX01000001_gene3155	3.289e-90	306.0	COG0530@1|root,COG0530@2|Bacteria,4NFBC@976|Bacteroidetes,47UAQ@768503|Cytophagia	976|Bacteroidetes	P	Sodium/calcium exchanger protein	yrbG	-	-	ko:K07301	-	-	-	-	ko00000,ko02000	2.A.19.5	-	-	Na_Ca_ex
BYD3_k127_1776007_3	760192.Halhy_3095	4.233e-144	468.0	COG1253@1|root,COG1253@2|Bacteria,4NDZ7@976|Bacteroidetes,1IQ0A@117747|Sphingobacteriia	976|Bacteroidetes	S	PFAM CBS domain	-	-	-	-	-	-	-	-	-	-	-	-	CBS,CorC_HlyC,DUF21
BYD3_k127_1776007_5	1237149.C900_04890	2.076e-116	383.0	COG0598@1|root,COG0598@2|Bacteria,4NG3C@976|Bacteroidetes,47JWS@768503|Cytophagia	976|Bacteroidetes	P	Mediates influx of magnesium ions	corA	-	-	ko:K03284	-	-	-	-	ko00000,ko02000	1.A.35.1,1.A.35.3	-	-	CorA
BYD3_k127_1776007_2	1237149.C900_04887	3.217e-151	486.0	COG0142@1|root,COG0142@2|Bacteria,4NET2@976|Bacteroidetes,47KFN@768503|Cytophagia	976|Bacteroidetes	H	Belongs to the FPP GGPP synthase family	ispB	-	2.5.1.90	ko:K02523	ko00900,ko01110,map00900,map01110	-	R09248	RC00279	ko00000,ko00001,ko01000,ko01006	-	-	-	polyprenyl_synt
BYD3_k127_1776007_1	1237149.C900_04882	2.274e-181	579.0	COG0526@1|root,COG0526@2|Bacteria,4NHEC@976|Bacteroidetes,47JHV@768503|Cytophagia	976|Bacteroidetes	CO	alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen	-	-	-	-	-	-	-	-	-	-	-	-	AhpC-TSA,DUF4369,DUF5106,Thioredoxin_8
BYD3_k127_1776007_4	1237149.C900_04877	9.565e-123	400.0	COG1131@1|root,COG1131@2|Bacteria,4NEH0@976|Bacteroidetes,47KF6@768503|Cytophagia	976|Bacteroidetes	V	TIGRFAM Gliding motility-associated ABC transporter ATP-binding subunit GldA	gldA	-	-	ko:K01990	-	M00254	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	ABC_tran
BYD3_k127_1776007_7	1454007.JAUG01000016_gene1722	1.232e-75	261.0	COG1277@1|root,COG1277@2|Bacteria,4NG5G@976|Bacteroidetes,1IRI4@117747|Sphingobacteriia	976|Bacteroidetes	S	TIGRFAM Gliding motility-associated ABC transporter permease protein GldF	gldF	-	-	ko:K01992	-	M00254	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	ABC2_membrane_2,ABC2_membrane_3
BYD3_k127_1776007_0	1237149.C900_04875	9.148e-202	643.0	COG3225@1|root,COG3225@2|Bacteria,4NF62@976|Bacteroidetes,47JZF@768503|Cytophagia	976|Bacteroidetes	N	ABC transporter substrate-binding component GldG	gldG	-	-	ko:K01992	-	M00254	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	ABC2_membrane_2,ABC_transp_aux
BYD3_k127_1776007_9	1237149.C900_04874	1.945e-36	151.0	2E7J5@1|root,3321E@2|Bacteria	2|Bacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	DUF4340
BYD3_k127_1791669_1	1123277.KB893239_gene1108	5.076e-164	521.0	COG0667@1|root,COG0667@2|Bacteria,4NEB0@976|Bacteroidetes,47JBA@768503|Cytophagia	976|Bacteroidetes	C	PFAM aldo keto reductase	-	-	-	-	-	-	-	-	-	-	-	-	Aldo_ket_red
BYD3_k127_1791669_3	765952.PUV_17800	1.893e-66	229.0	COG0702@1|root,COG0702@2|Bacteria	2|Bacteria	GM	epimerase	-	-	-	-	-	-	-	-	-	-	-	-	NAD_binding_10
BYD3_k127_1791669_2	1123057.P872_16700	9.513e-163	524.0	COG0667@1|root,COG0667@2|Bacteria,4NEB0@976|Bacteroidetes,47JBA@768503|Cytophagia	976|Bacteroidetes	C	PFAM aldo keto reductase	-	-	-	-	-	-	-	-	-	-	-	-	Aldo_ket_red,TAT_signal
BYD3_k127_1791669_4	504472.Slin_0945	7.976e-40	150.0	COG1695@1|root,COG1695@2|Bacteria,4NS5H@976|Bacteroidetes,47QMA@768503|Cytophagia	976|Bacteroidetes	K	Transcriptional regulator PadR-like family	-	-	-	-	-	-	-	-	-	-	-	-	PadR
BYD3_k127_1791669_0	504472.Slin_3637	8.897e-224	711.0	COG0577@1|root,COG0577@2|Bacteria,4P1B0@976|Bacteroidetes,47U89@768503|Cytophagia	976|Bacteroidetes	V	MacB-like periplasmic core domain	-	-	-	-	-	-	-	-	-	-	-	-	MacB_PCD
BYD3_k127_1791691_2	1121285.AUFK01000017_gene3163	1.281e-05	55.0	29EN2@1|root,301K0@2|Bacteria,4PJY4@976|Bacteroidetes,1IM0B@117743|Flavobacteriia,3ZTID@59732|Chryseobacterium	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_1791691_1	1408473.JHXO01000001_gene2529	2.057e-102	338.0	COG1216@1|root,COG1216@2|Bacteria,4NEHI@976|Bacteroidetes,2FM3A@200643|Bacteroidia	976|Bacteroidetes	S	Glycosyltransferase, group 2 family protein	dpm1	-	2.4.1.83	ko:K00721	ko00510,ko01100,map00510,map01100	-	R01009	RC00005	ko00000,ko00001,ko01000,ko01003	-	GT2	-	Glycos_transf_2
BYD3_k127_1791691_0	1121904.ARBP01000001_gene5338	3.814e-292	908.0	COG0480@1|root,COG0480@2|Bacteria,4NE9X@976|Bacteroidetes,47M8E@768503|Cytophagia	976|Bacteroidetes	J	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome	-	-	-	ko:K02355	-	-	-	-	ko00000,ko03012,ko03029	-	-	-	EFG_C,EFG_II,EFG_IV,GTP_EFTU,GTP_EFTU_D2
BYD3_k127_1801208_3	1237149.C900_04916	4.036e-50	185.0	COG1629@1|root,COG1629@2|Bacteria,4PKRK@976|Bacteroidetes,47Y3I@768503|Cytophagia	976|Bacteroidetes	P	TonB dependent receptor	-	-	-	-	-	-	-	-	-	-	-	-	CarbopepD_reg_2,Plug,TonB_dep_Rec
BYD3_k127_1801208_1	1408473.JHXO01000001_gene2119	1.413e-107	368.0	COG3291@1|root,COG3291@2|Bacteria,4PKU5@976|Bacteroidetes,2G0D2@200643|Bacteroidia	976|Bacteroidetes	S	Pkd domain containing protein	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_1801208_0	1237149.C900_04914	2.175e-170	540.0	COG0714@1|root,COG0714@2|Bacteria,4NDVZ@976|Bacteroidetes,47JEN@768503|Cytophagia	976|Bacteroidetes	S	PFAM ATPase family associated with various cellular activities (AAA)	-	-	-	ko:K03924	-	-	-	-	ko00000,ko01000	-	-	-	AAA_3
BYD3_k127_1801208_2	1237149.C900_04913	4.982e-81	275.0	COG0639@1|root,COG0639@2|Bacteria,4NEQW@976|Bacteroidetes,47SZE@768503|Cytophagia	976|Bacteroidetes	T	Calcineurin-like phosphoesterase	-	-	3.1.3.16	ko:K07313	-	-	-	-	ko00000,ko01000	-	-	-	Metallophos
BYD3_k127_1801208_4	1237149.C900_04925	9.11e-45	168.0	COG0322@1|root,COG0847@1|root,COG0322@2|Bacteria,COG0847@2|Bacteria,4NEQX@976|Bacteroidetes,47PIJ@768503|Cytophagia	976|Bacteroidetes	L	TIGRFAM exonuclease, DNA polymerase III, epsilon subunit family	-	-	2.7.7.7	ko:K02342	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	M00260	R00375,R00376,R00377,R00378	RC02795	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	-	-	-	GIY-YIG,RNase_T
BYD3_k127_1811164_2	391596.PBAL39_11972	2.376e-133	431.0	COG0451@1|root,COG0451@2|Bacteria,4NDV4@976|Bacteroidetes,1IQ44@117747|Sphingobacteriia	976|Bacteroidetes	GM	Catalyzes the two-step NADP-dependent conversion of GDP- 4-dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction	fcl	-	1.1.1.271	ko:K02377	ko00051,ko00520,ko01100,map00051,map00520,map01100	-	R05692	RC01014	ko00000,ko00001,ko01000	-	-	-	Epimerase
BYD3_k127_1811164_3	1121904.ARBP01000003_gene6602	2.241e-91	306.0	COG1218@1|root,COG1218@2|Bacteria,4NFHY@976|Bacteroidetes,47PAU@768503|Cytophagia	976|Bacteroidetes	P	Inositol monophosphatase family	cysQ	-	3.1.3.7	ko:K01082	ko00920,ko01100,ko01120,ko01130,map00920,map01100,map01120,map01130	-	R00188,R00508	RC00078	ko00000,ko00001,ko01000,ko03016	-	-	-	Inositol_P
BYD3_k127_1811164_0	1305737.JAFX01000001_gene772	6.676e-206	650.0	COG2895@1|root,COG2895@2|Bacteria,4NETI@976|Bacteroidetes,47KGK@768503|Cytophagia	976|Bacteroidetes	P	Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN NodQ subfamily	cysN	-	2.7.1.25,2.7.7.4	ko:K00955,ko:K00956	ko00230,ko00261,ko00450,ko00920,ko01100,ko01120,ko01130,map00230,map00261,map00450,map00920,map01100,map01120,map01130	M00176,M00596	R00509,R00529,R04928,R04929	RC00002,RC00078,RC02809,RC02889	ko00000,ko00001,ko00002,ko01000	-	-	-	GTP_EFTU
BYD3_k127_1811164_1	1288963.ADIS_0288	1.163e-162	515.0	COG0175@1|root,COG0175@2|Bacteria,4NEPD@976|Bacteroidetes,47JCC@768503|Cytophagia	976|Bacteroidetes	EH	TIGRFAM sulfate adenylyltransferase, small subunit	cysD	-	2.7.7.4	ko:K00957	ko00230,ko00261,ko00450,ko00920,ko01100,ko01120,ko01130,map00230,map00261,map00450,map00920,map01100,map01120,map01130	M00176,M00596	R00529,R04929	RC02809,RC02889	ko00000,ko00001,ko00002,ko01000	-	-	-	PAPS_reduct
BYD3_k127_1811164_4	1288963.ADIS_0289	1.164e-70	244.0	COG0529@1|root,COG0529@2|Bacteria,4NGCU@976|Bacteroidetes,47NAS@768503|Cytophagia	976|Bacteroidetes	P	Catalyzes the synthesis of activated sulfate	cysC	GO:0003674,GO:0003824,GO:0004020,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0044237	2.7.1.25	ko:K00860	ko00230,ko00920,ko01100,ko01120,map00230,map00920,map01100,map01120	M00176	R00509,R04928	RC00002,RC00078	ko00000,ko00001,ko00002,ko01000	-	-	-	APS_kinase
BYD3_k127_1811164_5	1305737.JAFX01000001_gene769	1.986e-43	164.0	COG0471@1|root,COG0569@1|root,COG0471@2|Bacteria,COG0569@2|Bacteria,4NF52@976|Bacteroidetes,47NEH@768503|Cytophagia	976|Bacteroidetes	P	COGs COG0471 Di- and tricarboxylate transporter	-	-	-	-	-	-	-	-	-	-	-	-	CitMHS,TrkA_C
BYD3_k127_1824292_15	929562.Emtol_2346	3.076e-46	177.0	COG4757@1|root,COG4757@2|Bacteria,4NJ3M@976|Bacteroidetes,47QI5@768503|Cytophagia	976|Bacteroidetes	S	Alpha/beta hydrolase family	-	-	-	-	-	-	-	-	-	-	-	-	Hydrolase_4
BYD3_k127_1824292_6	1250232.JQNJ01000001_gene1549	1.677e-136	468.0	COG0745@1|root,COG5002@1|root,COG0745@2|Bacteria,COG5002@2|Bacteria,4P0IA@976|Bacteroidetes,1HZEZ@117743|Flavobacteriia	976|Bacteroidetes	T	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase	-	-	-	-	-	-	-	-	-	-	-	-	7TMR-DISMED2,7TMR-DISM_7TM,HATPase_c,HTH_18,HisKA,Response_reg,TPR_12,TPR_8
BYD3_k127_1824292_4	1121904.ARBP01000014_gene136	1.616e-146	479.0	COG4244@1|root,COG4886@1|root,COG4244@2|Bacteria,COG4886@2|Bacteria,4NK9B@976|Bacteroidetes,47MQB@768503|Cytophagia	976|Bacteroidetes	S	Planctomycete cytochrome C	-	-	-	-	-	-	-	-	-	-	-	-	PSCyt1
BYD3_k127_1824292_2	1121904.ARBP01000014_gene134	2.11e-213	670.0	COG2960@1|root,COG2960@2|Bacteria,4NFIK@976|Bacteroidetes,47N49@768503|Cytophagia	976|Bacteroidetes	S	Protein of unknown function (DUF1552)	-	-	-	-	-	-	-	-	-	-	-	-	HXXSHH
BYD3_k127_1824292_1	1121904.ARBP01000014_gene133	3.027e-268	839.0	COG0551@1|root,COG2010@1|root,COG0551@2|Bacteria,COG2010@2|Bacteria,4NI4S@976|Bacteroidetes,47M53@768503|Cytophagia	976|Bacteroidetes	CL	Protein of unknown function (DUF1595)	-	-	-	-	-	-	-	-	-	-	-	-	PSCyt3,PSD2,PSD3,PSD4,PSD5
BYD3_k127_1824292_12	485918.Cpin_0082	1.119e-81	286.0	COG0079@1|root,COG0079@2|Bacteria,4NEW8@976|Bacteroidetes,1IRI9@117747|Sphingobacteriia	976|Bacteroidetes	E	PFAM Aminotransferase class I and II	-	-	2.6.1.9	ko:K00817	ko00340,ko00350,ko00360,ko00400,ko00401,ko00960,ko01100,ko01110,ko01130,ko01230,map00340,map00350,map00360,map00400,map00401,map00960,map01100,map01110,map01130,map01230	M00026	R00694,R00734,R03243	RC00006,RC00888	ko00000,ko00001,ko00002,ko01000,ko01007	-	-	-	Aminotran_1_2
BYD3_k127_1824292_11	388413.ALPR1_16309	2.803e-82	279.0	COG1943@1|root,COG1943@2|Bacteria,4NJZI@976|Bacteroidetes,47PW0@768503|Cytophagia	976|Bacteroidetes	L	Transposase IS200 like	-	-	-	-	-	-	-	-	-	-	-	-	Y1_Tnp
BYD3_k127_1824292_8	1166018.FAES_0370	7.145e-113	378.0	COG2072@1|root,COG2072@2|Bacteria,4NGC0@976|Bacteroidetes,47S96@768503|Cytophagia	976|Bacteroidetes	P	Flavin-binding monooxygenase-like	-	-	-	ko:K07222	-	-	-	-	ko00000	-	-	-	Pyr_redox_3
BYD3_k127_1824292_5	1250232.JQNJ01000001_gene3836	1.073e-139	453.0	COG2133@1|root,COG2133@2|Bacteria,4NEZC@976|Bacteroidetes,1HXFV@117743|Flavobacteriia	976|Bacteroidetes	G	Glucose sorbosone	-	-	-	ko:K21430	-	-	-	-	ko00000,ko01000	-	-	-	GSDH
BYD3_k127_1824292_9	1123248.KB893314_gene3298	1.11e-93	313.0	COG1940@1|root,COG1940@2|Bacteria,4NFNR@976|Bacteroidetes,1IRJC@117747|Sphingobacteriia	976|Bacteroidetes	GK	ROK family	ppgK	-	2.7.1.2,2.7.1.63	ko:K00845,ko:K00886	ko00010,ko00052,ko00500,ko00520,ko00521,ko00524,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00052,map00500,map00520,map00521,map00524,map01100,map01110,map01120,map01130,map01200	M00001,M00549	R00299,R01600,R01786,R02187,R02189	RC00002,RC00017	ko00000,ko00001,ko00002,ko01000	-	-	-	ROK
BYD3_k127_1824292_19	203122.Sde_3029	8.444e-05	52.0	COG3295@1|root,COG3295@2|Bacteria,1R9YV@1224|Proteobacteria,1S334@1236|Gammaproteobacteria,468A8@72275|Alteromonadaceae	1236|Gammaproteobacteria	S	Putative PepSY_TM-like	-	-	-	ko:K09939	-	-	-	-	ko00000	-	-	-	PepSY_TM_like_2
BYD3_k127_1824292_0	926549.KI421517_gene4109	0.0	1112.0	COG1529@1|root,COG1529@2|Bacteria,4NFFU@976|Bacteroidetes,47KVI@768503|Cytophagia	976|Bacteroidetes	C	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain	-	-	1.3.99.16	ko:K07303	-	-	-	-	ko00000,ko01000	-	-	-	Ald_Xan_dh_C2
BYD3_k127_1824292_13	1185876.BN8_02316	2.119e-79	268.0	COG2080@1|root,COG2080@2|Bacteria,4NM72@976|Bacteroidetes,47PGG@768503|Cytophagia	976|Bacteroidetes	C	Aerobic-type carbon monoxide dehydrogenase small subunit CoxS	-	-	1.3.99.16	ko:K07302	-	-	-	-	ko00000,ko01000	-	-	-	Fer2,Fer2_2
BYD3_k127_1824292_14	1123236.KB899379_gene1495	4.25e-60	215.0	COG2227@1|root,COG2227@2|Bacteria,1R5ZG@1224|Proteobacteria	1224|Proteobacteria	H	Methyltransferase domain	MA20_06080	-	-	-	-	-	-	-	-	-	-	-	Methyltransf_11,Methyltransf_12,Methyltransf_23
BYD3_k127_1824292_7	1121904.ARBP01000002_gene6934	1.882e-126	413.0	COG0263@1|root,COG0263@2|Bacteria,4NH75@976|Bacteroidetes,47KIA@768503|Cytophagia	976|Bacteroidetes	E	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate	proB	GO:0003674,GO:0003824,GO:0004349,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006560,GO:0006561,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016774,GO:0018130,GO:0019202,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607	2.7.2.11	ko:K00931	ko00330,ko00332,ko01100,ko01130,ko01230,map00330,map00332,map01100,map01130,map01230	M00015	R00239	RC00002,RC00043	ko00000,ko00001,ko00002,ko01000	-	-	-	AA_kinase,PUA
BYD3_k127_1824292_3	1121904.ARBP01000004_gene801	5.589e-174	554.0	COG0014@1|root,COG0014@2|Bacteria,4NEPQ@976|Bacteroidetes,47J99@768503|Cytophagia	976|Bacteroidetes	E	Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate	proA	GO:0003674,GO:0003824,GO:0004350,GO:0008150,GO:0008152,GO:0016491,GO:0016620,GO:0016903,GO:0055114	1.2.1.41	ko:K00147	ko00330,ko00332,ko01100,ko01110,ko01130,ko01230,map00330,map00332,map01100,map01110,map01130,map01230	M00015	R03313	RC00684	ko00000,ko00001,ko00002,ko01000	-	-	-	Aldedh
BYD3_k127_1824292_17	1279009.ADICEAN_03168	4.734e-11	63.0	COG1012@1|root,COG1012@2|Bacteria	2|Bacteria	C	belongs to the aldehyde dehydrogenase family	pruA	-	1.2.1.88	ko:K00294	ko00250,ko00330,ko01100,map00250,map00330,map01100	-	R00245,R00707,R00708,R04444,R04445,R05051	RC00080,RC00216,RC00242,RC00255	ko00000,ko00001,ko01000	-	-	-	Aldedh
BYD3_k127_1824292_10	1121011.AUCB01000014_gene357	4.794e-84	287.0	COG0627@1|root,COG0627@2|Bacteria,4NGI8@976|Bacteroidetes,1HZPK@117743|Flavobacteriia	976|Bacteroidetes	S	Putative esterase	xynC	-	-	-	-	-	-	-	-	-	-	-	Esterase
BYD3_k127_1824292_18	1123276.KB893290_gene5261	6.579e-08	54.0	COG1062@1|root,COG1062@2|Bacteria,4NF83@976|Bacteroidetes,47NW9@768503|Cytophagia	976|Bacteroidetes	C	Alcohol dehydrogenase GroES-like domain	-	-	1.1.1.1,1.1.1.284	ko:K00121	ko00010,ko00071,ko00350,ko00625,ko00626,ko00680,ko00830,ko00980,ko00982,ko01100,ko01110,ko01120,ko01130,ko01200,ko01220,ko05204,map00010,map00071,map00350,map00625,map00626,map00680,map00830,map00980,map00982,map01100,map01110,map01120,map01130,map01200,map01220,map05204	-	R00623,R00754,R02124,R04880,R05233,R05234,R06917,R06927,R06983,R07105,R08281,R08306,R08310	RC00050,RC00087,RC00088,RC00099,RC00116,RC00649,RC01715,RC01734,RC02273	ko00000,ko00001,ko01000	-	-	-	ADH_N,ADH_zinc_N
BYD3_k127_1826527_0	700598.Niako_1910	1.063e-150	482.0	COG0620@1|root,COG0620@2|Bacteria,4NJAH@976|Bacteroidetes,1IZXY@117747|Sphingobacteriia	976|Bacteroidetes	E	COGs COG0620 Methionine synthase II (cobalamin-independent)	-	-	2.1.1.14	ko:K00549	ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230	M00017	R04405,R09365	RC00035,RC00113,RC01241	ko00000,ko00001,ko00002,ko01000	-	-	-	Meth_synt_2
BYD3_k127_1826527_2	760192.Halhy_0024	1.676e-68	237.0	COG2128@1|root,COG2128@2|Bacteria,4NNHK@976|Bacteroidetes,1IWPA@117747|Sphingobacteriia	976|Bacteroidetes	S	Carboxymuconolactone decarboxylase family	-	-	-	-	-	-	-	-	-	-	-	-	CMD
BYD3_k127_1826527_1	1121481.AUAS01000001_gene4747	1.806e-142	461.0	COG2128@1|root,COG2128@2|Bacteria,4NHD5@976|Bacteroidetes,47M83@768503|Cytophagia	976|Bacteroidetes	S	Protein of unknown function (DUF3179)	-	-	-	-	-	-	-	-	-	-	-	-	DUF3179
BYD3_k127_1826527_3	991.IW20_11200	5.408e-49	184.0	294DM@1|root,2ZRTK@2|Bacteria,4NPQ1@976|Bacteroidetes,1I6ZZ@117743|Flavobacteriia,2NW49@237|Flavobacterium	976|Bacteroidetes	S	Domain of unknown function (DUF4184)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4184
BYD3_k127_1826527_4	1237149.C900_00071	8.711e-12	66.0	COG1793@1|root,COG3285@1|root,COG1793@2|Bacteria,COG3285@2|Bacteria,4NESR@976|Bacteroidetes,47NMI@768503|Cytophagia	976|Bacteroidetes	L	DNA polymerase Ligase (LigD)	-	-	-	-	-	-	-	-	-	-	-	-	DNA_ligase_A_C,DNA_ligase_A_M,LigD_N
BYD3_k127_182916_9	1123057.P872_23590	1.154e-43	162.0	COG2005@1|root,COG2005@2|Bacteria,4NUSR@976|Bacteroidetes,47RBD@768503|Cytophagia	976|Bacteroidetes	S	Bacterial regulatory helix-turn-helix protein, lysR family	-	-	-	ko:K02019	-	-	-	-	ko00000,ko03000	-	-	-	HTH_1
BYD3_k127_182916_10	1185876.BN8_05029	1.506e-42	163.0	COG2041@1|root,COG2041@2|Bacteria,4NSHC@976|Bacteroidetes,47QZ1@768503|Cytophagia	976|Bacteroidetes	S	Oxidoreductase molybdopterin binding domain	-	-	-	-	-	-	-	-	-	-	-	-	Oxidored_molyb
BYD3_k127_182916_5	1123057.P872_23585	9.539e-82	278.0	COG0725@1|root,COG0725@2|Bacteria,4NMPV@976|Bacteroidetes,47PBN@768503|Cytophagia	976|Bacteroidetes	P	TIGRFAM molybdenum ABC transporter, periplasmic molybdate-binding protein	modA	-	-	ko:K02020	ko02010,map02010	M00189	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.8	-	-	SBP_bac_11
BYD3_k127_182916_3	1123057.P872_23580	1.376e-95	317.0	COG4149@1|root,COG4149@2|Bacteria,4NIXK@976|Bacteroidetes,47NHM@768503|Cytophagia	976|Bacteroidetes	P	PFAM binding-protein-dependent transport systems inner membrane component	modB	-	-	ko:K02018	ko02010,map02010	M00189	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.8	-	-	BPD_transp_1
BYD3_k127_182916_4	1123057.P872_23575	7.485e-92	308.0	COG3842@1|root,COG3842@2|Bacteria,4NK56@976|Bacteroidetes,47MCQ@768503|Cytophagia	976|Bacteroidetes	E	ATPases associated with a variety of cellular activities	-	-	3.6.3.29	ko:K02017	ko02010,map02010	M00189	-	-	ko00000,ko00001,ko00002,ko01000,ko02000	3.A.1.8	-	-	ABC_tran
BYD3_k127_182916_11	698761.RTCIAT899_CH04575	2.37e-40	153.0	COG0346@1|root,COG0346@2|Bacteria,1PW4X@1224|Proteobacteria,2V7BJ@28211|Alphaproteobacteria,4BHUY@82115|Rhizobiaceae	28211|Alphaproteobacteria	E	lactoylglutathione lyase activity	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_182916_7	700598.Niako_4637	5.812e-58	208.0	2CYFR@1|root,32T44@2|Bacteria,4P6IN@976|Bacteroidetes,1IZDY@117747|Sphingobacteriia	976|Bacteroidetes	S	Protein of unknown function (DUF998)	-	-	-	-	-	-	-	-	-	-	-	-	DUF998
BYD3_k127_182916_2	1122621.ATZA01000044_gene2109	1.12e-167	533.0	COG2220@1|root,COG2220@2|Bacteria,4NENZ@976|Bacteroidetes,1IQQV@117747|Sphingobacteriia	976|Bacteroidetes	S	beta-lactamase	romA	-	-	-	-	-	-	-	-	-	-	-	Lactamase_B_2
BYD3_k127_182916_6	761193.Runsl_4030	8.621e-76	261.0	COG1247@1|root,COG1247@2|Bacteria	2|Bacteria	M	phosphinothricin N-acetyltransferase activity	yhhY	GO:0003674,GO:0003824,GO:0004596,GO:0005575,GO:0005622,GO:0005623,GO:0006464,GO:0006473,GO:0006474,GO:0006807,GO:0008080,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016407,GO:0016410,GO:0016740,GO:0016746,GO:0016747,GO:0019538,GO:0031248,GO:0031365,GO:0032991,GO:0034212,GO:0036211,GO:0043170,GO:0043412,GO:0043543,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044464,GO:0051604,GO:0071704,GO:1901564,GO:1902493,GO:1902494,GO:1990234	2.1.2.9	ko:K00604,ko:K03825	ko00670,ko00970,map00670,map00970	-	R03940	RC00026,RC00165	ko00000,ko00001,ko01000	-	-	-	Acetyltransf_1,Acetyltransf_4
BYD3_k127_182916_1	1237149.C900_05293	2.061e-197	642.0	COG0577@1|root,COG0577@2|Bacteria,4NKYD@976|Bacteroidetes,47MU6@768503|Cytophagia	976|Bacteroidetes	V	MacB-like periplasmic core domain	-	-	-	-	-	-	-	-	-	-	-	-	FtsX,MacB_PCD
BYD3_k127_182916_8	1121373.KB903624_gene2422	2.145e-51	198.0	2BUNJ@1|root,32PZE@2|Bacteria,4NQFC@976|Bacteroidetes,47VU5@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_182916_0	1123277.KB893215_gene2518	0.0	1115.0	COG4354@1|root,COG4354@2|Bacteria,4NFQW@976|Bacteroidetes	976|Bacteroidetes	G	bile acid beta-glucosidase	-	-	3.2.1.45	ko:K17108	ko00511,ko00600,ko01100,map00511,map00600,map01100	-	R01498	RC00059,RC00451	ko00000,ko00001,ko01000	-	GH116	-	DUF608,Glyco_hydr_116N
BYD3_k127_1832950_2	768670.Calni_1777	7.659e-44	177.0	COG0659@1|root,COG0659@2|Bacteria,2GG7H@200930|Deferribacteres	200930|Deferribacteres	P	Sulfate transporter antisigma-factor antagonist STAS	-	-	-	ko:K03321	-	-	-	-	ko00000,ko02000	2.A.53.3	-	-	STAS,Sulfate_transp
BYD3_k127_1832950_0	946077.W5A_01335	3.151e-92	308.0	COG0288@1|root,COG0288@2|Bacteria,4NEJT@976|Bacteroidetes,1HXG3@117743|Flavobacteriia	976|Bacteroidetes	P	Reversible hydration of carbon dioxide	cynT	-	4.2.1.1	ko:K01673	ko00910,map00910	-	R00132,R10092	RC02807	ko00000,ko00001,ko01000	-	-	-	Pro_CA
BYD3_k127_1832950_1	755732.Fluta_1140	1.27e-67	234.0	COG0659@1|root,COG0659@2|Bacteria,4NE9G@976|Bacteroidetes,1HYXB@117743|Flavobacteriia,2PAJA@246874|Cryomorphaceae	976|Bacteroidetes	P	PFAM Sulfate transporter family	-	-	-	ko:K03321	-	-	-	-	ko00000,ko02000	2.A.53.3	-	-	Sulfate_transp
BYD3_k127_1835651_4	926562.Oweho_0926	1.415e-34	136.0	COG2199@1|root,COG3706@2|Bacteria,4PMSX@976|Bacteroidetes	976|Bacteroidetes	T	response regulator receiver	-	-	-	-	-	-	-	-	-	-	-	-	Response_reg
BYD3_k127_1835651_2	1004149.AFOE01000042_gene2736	2.951e-73	271.0	COG2202@1|root,COG4251@1|root,COG2202@2|Bacteria,COG4251@2|Bacteria,4NFC3@976|Bacteroidetes,1HWUK@117743|Flavobacteriia	976|Bacteroidetes	T	Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase	-	-	-	-	-	-	-	-	-	-	-	-	HATPase_c,PAS,PAS_3,PAS_4,PAS_9
BYD3_k127_1835651_3	1121897.AUGO01000015_gene3384	3.535e-42	163.0	COG1970@1|root,COG1970@2|Bacteria,4NQ49@976|Bacteroidetes,1I33I@117743|Flavobacteriia,2NWE0@237|Flavobacterium	976|Bacteroidetes	M	Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell	mscL	-	-	ko:K03282	-	-	-	-	ko00000,ko02000	1.A.22.1	-	-	MscL
BYD3_k127_1835651_1	1237149.C900_05818	7.381e-150	478.0	COG1250@1|root,COG1250@2|Bacteria,4NGU8@976|Bacteroidetes,47NRU@768503|Cytophagia	976|Bacteroidetes	I	3-hydroxyacyl-CoA dehydrogenase, C-terminal domain	hbd	-	1.1.1.157	ko:K00074	ko00360,ko00362,ko00650,ko01100,ko01120,map00360,map00362,map00650,map01100,map01120	-	R01976,R05576,R06941	RC00029,RC00117	ko00000,ko00001,ko01000	-	-	-	3HCDH,3HCDH_N
BYD3_k127_1835651_5	1121904.ARBP01000004_gene965	4.964e-23	102.0	2C5P8@1|root,32U6D@2|Bacteria,4NSY7@976|Bacteroidetes,47R86@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_1835651_0	1237149.C900_05825	3.792e-155	499.0	COG3000@1|root,COG3000@2|Bacteria,4NFWX@976|Bacteroidetes,47KXY@768503|Cytophagia	976|Bacteroidetes	I	PFAM Fatty acid hydroxylase	-	-	-	-	-	-	-	-	-	-	-	-	FA_hydroxylase
BYD3_k127_1835651_7	700598.Niako_0885	8.812e-13	69.0	COG0187@1|root,COG0187@2|Bacteria,4NF18@976|Bacteroidetes,1IQV0@117747|Sphingobacteriia	976|Bacteroidetes	L	Type IIA topoisomerase (DNA gyrase topo II topoisomerase IV) B subunit	parE	-	-	ko:K02622	-	-	-	-	ko00000,ko01000,ko02048,ko03032,ko03036	-	-	-	DNA_gyraseB,DNA_gyraseB_C,HATPase_c,Toprim
BYD3_k127_1851901_3	700598.Niako_6357	7.878e-90	302.0	COG1305@1|root,COG1305@2|Bacteria,4NF4N@976|Bacteroidetes,1IPWA@117747|Sphingobacteriia	976|Bacteroidetes	E	COGs COG1305 Transglutaminase-like protein	-	-	-	-	-	-	-	-	-	-	-	-	Bact_transglu_N,Transglut_core
BYD3_k127_1851901_0	1237149.C900_00549	7.391e-303	939.0	COG0363@1|root,COG2120@1|root,COG0363@2|Bacteria,COG2120@2|Bacteria,4NDUN@976|Bacteroidetes,47KPX@768503|Cytophagia	976|Bacteroidetes	G	Glucosamine-6-phosphate isomerase	nagB	-	3.5.99.6	ko:K02564	ko00520,ko01100,map00520,map01100	-	R00765	RC00163	ko00000,ko00001,ko01000	-	-	-	Glucosamine_iso,PIG-L
BYD3_k127_1851901_1	1237149.C900_05209	1.607e-98	332.0	COG2755@1|root,COG2755@2|Bacteria,4NFN6@976|Bacteroidetes,47JI4@768503|Cytophagia	976|Bacteroidetes	E	PFAM GSCFA family	-	-	-	-	-	-	-	-	-	-	-	-	GSCFA
BYD3_k127_1851901_2	1124780.ANNU01000037_gene116	3.709e-90	302.0	COG1331@1|root,COG1331@2|Bacteria,4NFE2@976|Bacteroidetes,47M2A@768503|Cytophagia	976|Bacteroidetes	O	COGs COG1331 Highly conserved protein containing a thioredoxin domain	-	-	-	ko:K06888	-	-	-	-	ko00000	-	-	-	GlcNAc_2-epim,Thioredox_DsbH
BYD3_k127_1865428_8	1443665.JACA01000007_gene198	3.381e-33	131.0	COG1595@1|root,COG1595@2|Bacteria,4NNRM@976|Bacteroidetes,1I2M7@117743|Flavobacteriia,2YKFV@290174|Aquimarina	976|Bacteroidetes	K	Sigma-70, region 4	-	-	-	ko:K03088	-	-	-	-	ko00000,ko03021	-	-	-	Sigma70_r2,Sigma70_r4_2
BYD3_k127_1865428_4	1120965.AUBV01000013_gene1318	4.058e-56	207.0	COG2378@1|root,COG2378@2|Bacteria,4NN6R@976|Bacteroidetes,47QC2@768503|Cytophagia	976|Bacteroidetes	K	WYL domain	-	-	-	-	-	-	-	-	-	-	-	-	HTH_11,WYL
BYD3_k127_1865428_3	1094466.KQS_05880	5.301e-80	284.0	COG4487@1|root,COG4487@2|Bacteria,4NGZ9@976|Bacteroidetes,1HZ50@117743|Flavobacteriia,2NV85@237|Flavobacterium	976|Bacteroidetes	S	Uncharacterized protein conserved in bacteria (DUF2130)	-	-	-	-	-	-	-	-	-	-	-	-	DUF2130
BYD3_k127_1865428_0	760192.Halhy_3609	1.608e-231	722.0	COG0673@1|root,COG0673@2|Bacteria,4NF96@976|Bacteroidetes,1IQ5B@117747|Sphingobacteriia	976|Bacteroidetes	S	Oxidoreductase domain protein	-	-	-	-	-	-	-	-	-	-	-	-	GFO_IDH_MocA
BYD3_k127_1865428_2	1123248.KB893320_gene3912	1.672e-200	633.0	COG2942@1|root,COG2942@2|Bacteria,4NEH7@976|Bacteroidetes,1IVKJ@117747|Sphingobacteriia	976|Bacteroidetes	G	N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase)	-	-	5.1.3.11	ko:K16213	-	-	R01445,R10810	RC00289	ko00000,ko01000	-	-	-	GlcNAc_2-epim
BYD3_k127_1865428_5	700598.Niako_1609	2.036e-54	193.0	COG1764@1|root,COG1764@2|Bacteria,4NQKB@976|Bacteroidetes,1IT1Y@117747|Sphingobacteriia	976|Bacteroidetes	O	TIGRFAM Peroxiredoxin, osmotically inducible protein C, subgroup	-	-	-	ko:K04063	-	-	-	-	ko00000	-	-	-	OsmC
BYD3_k127_1865428_7	509635.N824_00240	8.802e-36	143.0	COG1595@1|root,COG1595@2|Bacteria,4NSXH@976|Bacteroidetes	976|Bacteroidetes	K	Belongs to the sigma-70 factor family. ECF subfamily	-	-	-	ko:K03088	-	-	-	-	ko00000,ko03021	-	-	-	Sigma70_r2,Sigma70_r4_2
BYD3_k127_1865428_6	1123277.KB893176_gene3718	4.633e-54	203.0	COG3712@1|root,COG3712@2|Bacteria,4NSEH@976|Bacteroidetes,47RNC@768503|Cytophagia	976|Bacteroidetes	PT	Domain of unknown function (DUF4974)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4974,FecR
BYD3_k127_1865428_1	1121904.ARBP01000029_gene2144	1.193e-206	670.0	COG1629@1|root,COG1629@2|Bacteria,4NDXS@976|Bacteroidetes,47JJJ@768503|Cytophagia	976|Bacteroidetes	P	TonB-dependent Receptor Plug	-	-	-	-	-	-	-	-	-	-	-	-	CarbopepD_reg_2,Plug,TonB_dep_Rec
BYD3_k127_1877029_8	1150600.ADIARSV_3461	2.878e-52	190.0	COG1538@1|root,COG1538@2|Bacteria,4NE4S@976|Bacteroidetes,1IR82@117747|Sphingobacteriia	976|Bacteroidetes	MU	Outer membrane efflux protein	-	-	-	-	-	-	-	-	-	-	-	-	OEP
BYD3_k127_1877029_5	1150600.ADIARSV_3460	3.424e-107	358.0	COG0845@1|root,COG0845@2|Bacteria,4NF23@976|Bacteroidetes,1IU9I@117747|Sphingobacteriia	976|Bacteroidetes	M	Biotin-lipoyl like	-	-	-	-	-	-	-	-	-	-	-	-	HlyD_D23
BYD3_k127_1877029_0	714943.Mucpa_1942	0.0	1605.0	COG0841@1|root,COG0841@2|Bacteria,4NDZG@976|Bacteroidetes,1IPSY@117747|Sphingobacteriia	976|Bacteroidetes	V	Protein export membrane protein	-	-	-	-	-	-	-	-	-	-	-	-	ACR_tran
BYD3_k127_1877029_10	700598.Niako_0840	2.987e-25	108.0	2DZT3@1|root,32VI6@2|Bacteria,4NSPZ@976|Bacteroidetes	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_1877029_11	1168034.FH5T_20200	5.793e-20	91.0	COG0607@1|root,31225@2|Bacteria,4PGX1@976|Bacteroidetes,2FW1F@200643|Bacteroidia	976|Bacteroidetes	P	Protein of unknown function (DUF2892)	-	-	-	-	-	-	-	-	-	-	-	-	DUF2892
BYD3_k127_1877029_12	1408473.JHXO01000010_gene3542	2.164e-19	89.0	2DI4K@1|root,3020V@2|Bacteria,4NV1J@976|Bacteroidetes,2FVW5@200643|Bacteroidia	976|Bacteroidetes	S	Protein of unknown function (DUF2892)	-	-	-	-	-	-	-	-	-	-	-	-	DUF2892
BYD3_k127_1877029_7	1121875.KB907556_gene567	6.966e-63	227.0	COG0530@1|root,COG0530@2|Bacteria,4NFBC@976|Bacteroidetes	976|Bacteroidetes	P	K -dependent Na Ca exchanger	-	-	-	-	-	-	-	-	-	-	-	-	Na_Ca_ex
BYD3_k127_1877029_13	1408473.JHXO01000002_gene3904	2.039e-17	89.0	2AU1F@1|root,31JMK@2|Bacteria,4NQUW@976|Bacteroidetes	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_1877029_9	926549.KI421517_gene1175	3.854e-43	162.0	COG0071@1|root,COG0071@2|Bacteria,4NQXY@976|Bacteroidetes,47R7Q@768503|Cytophagia	976|Bacteroidetes	O	Belongs to the small heat shock protein (HSP20) family	-	-	-	ko:K13993	ko04141,map04141	-	-	-	ko00000,ko00001,ko03110	-	-	-	HSP20
BYD3_k127_1877029_15	860228.Ccan_07570	9.747e-05	47.0	2E59P@1|root,3301Z@2|Bacteria,4NUUS@976|Bacteroidetes,1I52U@117743|Flavobacteriia,1ESE5@1016|Capnocytophaga	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_1877029_1	1237149.C900_04113	7.331e-227	713.0	COG0659@1|root,COG0659@2|Bacteria,4NE9G@976|Bacteroidetes,47MPC@768503|Cytophagia	976|Bacteroidetes	P	COGs COG0659 Sulfate permease and related transporter (MFS superfamily)	-	-	-	ko:K03321	-	-	-	-	ko00000,ko02000	2.A.53.3	-	-	Sulfate_transp
BYD3_k127_1877029_3	1121904.ARBP01000018_gene2586	1.365e-147	479.0	COG1055@1|root,COG1055@2|Bacteria,4NGP4@976|Bacteroidetes,47JIU@768503|Cytophagia	976|Bacteroidetes	P	Na H antiporter NhaD and related arsenite	nhaD	-	-	-	-	-	-	-	-	-	-	-	CitMHS
BYD3_k127_1877029_2	1279009.ADICEAN_01483	9.644e-198	634.0	COG0668@1|root,COG0668@2|Bacteria,4NFC6@976|Bacteroidetes,47YNQ@768503|Cytophagia	976|Bacteroidetes	M	Mechanosensitive ion channel	mscM	-	-	-	-	-	-	-	-	-	-	-	MS_channel
BYD3_k127_1877029_14	1270193.JARP01000001_gene3274	6.437e-06	49.0	COG0531@1|root,COG0531@2|Bacteria,4NHS2@976|Bacteroidetes,1HX4J@117743|Flavobacteriia,2NTH2@237|Flavobacterium	976|Bacteroidetes	E	Amino acid permease	-	-	-	-	-	-	-	-	-	-	-	-	AA_permease_2
BYD3_k127_1877029_6	1356852.N008_16340	8.481e-100	338.0	COG0025@1|root,COG0025@2|Bacteria,4NK07@976|Bacteroidetes,47NVA@768503|Cytophagia	976|Bacteroidetes	P	PFAM sodium hydrogen exchanger	-	-	-	-	-	-	-	-	-	-	-	-	Na_H_Exchanger
BYD3_k127_1877029_4	1239962.C943_00984	2.79e-124	403.0	COG3746@1|root,COG3746@2|Bacteria,4NK5I@976|Bacteroidetes	976|Bacteroidetes	P	phosphate-selective porin O and P	-	-	-	ko:K07221	-	-	-	-	ko00000,ko02000	1.B.5.1	-	-	Porin_O_P
BYD3_k127_1901484_0	1237149.C900_01516	0.0	1424.0	COG0178@1|root,COG0178@2|Bacteria,4NEHM@976|Bacteroidetes,47JVJ@768503|Cytophagia	976|Bacteroidetes	L	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate	uvrA1	-	-	ko:K03701	ko03420,map03420	-	-	-	ko00000,ko00001,ko03400	-	-	-	AAA_21,ABC_tran
BYD3_k127_1901484_2	1239962.C943_02682	2.003e-119	392.0	COG0142@1|root,COG0142@2|Bacteria,4NEGQ@976|Bacteroidetes,47JRS@768503|Cytophagia	976|Bacteroidetes	H	Belongs to the FPP GGPP synthase family	idsA	-	2.5.1.1,2.5.1.10,2.5.1.29	ko:K13789	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	M00364,M00366	R01658,R02003,R02061	RC00279	ko00000,ko00001,ko00002,ko01000,ko01006	-	-	-	polyprenyl_synt
BYD3_k127_1901484_1	1237149.C900_02107	3.159e-285	892.0	COG0557@1|root,COG0557@2|Bacteria,4NE7T@976|Bacteroidetes,47JK7@768503|Cytophagia	976|Bacteroidetes	J	3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs	rnr	-	-	ko:K12573,ko:K12585	ko03018,map03018	M00391	-	-	ko00000,ko00001,ko00002,ko01000,ko03016,ko03019	-	-	-	OB_RNB,RNB,S1
BYD3_k127_1901484_3	866536.Belba_3831	1.874e-66	231.0	COG0417@1|root,COG0417@2|Bacteria,4PKQ5@976|Bacteroidetes,47KCR@768503|Cytophagia	976|Bacteroidetes	L	3'-5' exonuclease related to the exonuclease domain of PolB	-	-	-	ko:K07501	-	-	-	-	ko00000	-	-	-	DNA_pol_B_exo2
BYD3_k127_1902464_2	313606.M23134_04185	2.674e-12	78.0	COG0810@1|root,COG0810@2|Bacteria,4NMG7@976|Bacteroidetes,47KAX@768503|Cytophagia	976|Bacteroidetes	U	Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins	-	-	-	ko:K03832	-	-	-	-	ko00000,ko02000	2.C.1.1	-	-	TonB_C
BYD3_k127_1902464_4	1288963.ADIS_2797	3.689e-06	58.0	COG1629@1|root,COG4771@2|Bacteria,4NDU8@976|Bacteroidetes,47M35@768503|Cytophagia	976|Bacteroidetes	P	PFAM TonB-dependent Receptor Plug	-	-	-	-	-	-	-	-	-	-	-	-	CarbopepD_reg_2,Plug,TonB_dep_Rec
BYD3_k127_1902464_3	1237149.C900_05890	5.857e-12	70.0	COG3291@1|root,COG3291@2|Bacteria,4NDU9@976|Bacteroidetes,47MS8@768503|Cytophagia	976|Bacteroidetes	M	C-terminal domain of CHU protein family	-	-	-	-	-	-	-	-	-	-	-	-	CHU_C,PKD
BYD3_k127_1902464_0	1237149.C900_00928	0.0	1022.0	COG0308@1|root,COG0308@2|Bacteria,4NE13@976|Bacteroidetes,47KCK@768503|Cytophagia	976|Bacteroidetes	E	Aminopeptidase N	-	-	-	-	-	-	-	-	-	-	-	-	Peptidase_M1
BYD3_k127_1902464_1	1237149.C900_00927	1.882e-254	794.0	COG0308@1|root,COG0308@2|Bacteria,4NE13@976|Bacteroidetes,47KCK@768503|Cytophagia	976|Bacteroidetes	E	Aminopeptidase N	-	-	-	-	-	-	-	-	-	-	-	-	Peptidase_M1
BYD3_k127_1905227_3	1237149.C900_01650	2.09e-24	103.0	COG0462@1|root,COG0462@2|Bacteria,4NEVF@976|Bacteroidetes,47MGR@768503|Cytophagia	976|Bacteroidetes	EF	Ribose-phosphate pyrophosphokinase	prs	-	2.7.6.1	ko:K00948	ko00030,ko00230,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00230,map01100,map01110,map01120,map01130,map01200,map01230	M00005	R01049	RC00002,RC00078	ko00000,ko00001,ko00002,ko01000	-	-	-	Pribosyl_synth,Pribosyltran_N
BYD3_k127_1905227_1	643867.Ftrac_0552	7.85e-71	246.0	COG1825@1|root,COG1825@2|Bacteria,4NEN6@976|Bacteroidetes,47NVP@768503|Cytophagia	976|Bacteroidetes	J	This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance	ctc	GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008097,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904	-	ko:K02897	ko03010,map03010	M00178	-	-	ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_L25p,Ribosomal_TL5_C
BYD3_k127_1905227_0	1124780.ANNU01000045_gene2287	5.174e-84	282.0	COG0193@1|root,COG0193@2|Bacteria,4NI7N@976|Bacteroidetes,47Q0M@768503|Cytophagia	976|Bacteroidetes	J	The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis	pth	GO:0003674,GO:0003824,GO:0004045,GO:0016787,GO:0016788,GO:0052689,GO:0140098,GO:0140101	3.1.1.29	ko:K01056	-	-	-	-	ko00000,ko01000,ko03012	-	-	-	Pept_tRNA_hydro
BYD3_k127_1905227_2	1185876.BN8_04132	4.893e-59	214.0	COG2135@1|root,COG2135@2|Bacteria,4NI3T@976|Bacteroidetes,47XPZ@768503|Cytophagia	976|Bacteroidetes	S	Belongs to the SOS response-associated peptidase family	yoqW	-	-	-	-	-	-	-	-	-	-	-	SRAP
BYD3_k127_1917904_3	1340493.JNIF01000003_gene4142	2.451e-27	115.0	COG0412@1|root,COG0412@2|Bacteria,3Y2PZ@57723|Acidobacteria	57723|Acidobacteria	Q	Dienelactone hydrolase	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_1917904_1	1123277.KB893206_gene3285	1.198e-51	192.0	COG3257@1|root,COG3257@2|Bacteria,4NKCS@976|Bacteroidetes,47M25@768503|Cytophagia	976|Bacteroidetes	L	Cupin domain	-	-	3.5.3.26	ko:K14977	ko00230,ko01120,map00230,map01120	-	R05554	RC01419	ko00000,ko00001,ko01000	-	-	-	AraC_binding,Cupin_2
BYD3_k127_1917904_0	509635.N824_15685	1.557e-198	628.0	COG0673@1|root,COG0673@2|Bacteria,4NG5T@976|Bacteroidetes,1IRR9@117747|Sphingobacteriia	976|Bacteroidetes	S	COGs COG0673 dehydrogenase and related protein	-	-	-	-	-	-	-	-	-	-	-	-	GFO_IDH_MocA,Oxidoreduct_C
BYD3_k127_1917904_2	1123277.KB893196_gene4968	4.926e-43	158.0	COG0673@1|root,COG0673@2|Bacteria,4NGHJ@976|Bacteroidetes,47NH0@768503|Cytophagia	976|Bacteroidetes	S	Oxidoreductase family, NAD-binding Rossmann fold	-	-	-	-	-	-	-	-	-	-	-	-	GFO_IDH_MocA,GFO_IDH_MocA_C
BYD3_k127_1921109_22	313612.L8106_28746	3.837e-06	60.0	COG0457@1|root,COG1807@1|root,COG0457@2|Bacteria,COG1807@2|Bacteria,1G0TA@1117|Cyanobacteria,1H8GU@1150|Oscillatoriales	1117|Cyanobacteria	M	4-amino-4-deoxy-L-arabinose transferase	-	-	-	-	-	-	-	-	-	-	-	-	PMT,PMT_2,TPR_19
BYD3_k127_1921109_18	1121939.L861_18670	8.698e-24	107.0	COG0110@1|root,COG0110@2|Bacteria,1NNC9@1224|Proteobacteria	1224|Proteobacteria	S	Bacterial transferase hexapeptide (six repeats)	-	-	-	-	-	-	-	-	-	-	-	-	Hexapep
BYD3_k127_1921109_8	1005048.CFU_0822	6.26e-75	262.0	COG2227@1|root,COG2227@2|Bacteria,1R0XD@1224|Proteobacteria,2WHXW@28216|Betaproteobacteria	28216|Betaproteobacteria	H	Putative S-adenosyl-L-methionine-dependent methyltransferase	-	-	-	-	-	-	-	-	-	-	-	-	Methyltransf_11
BYD3_k127_1921109_11	247634.GPB2148_2212	2.372e-62	228.0	COG0438@1|root,COG0438@2|Bacteria,1MZH2@1224|Proteobacteria,1S9AM@1236|Gammaproteobacteria,1JB0Z@118884|unclassified Gammaproteobacteria	1236|Gammaproteobacteria	H	Glycosyl transferase, group 1	-	-	2.4.1.346	ko:K13668	-	-	R11703,R11704	-	ko00000,ko01000,ko01003	-	GT4	-	Glyco_trans_1_4,Glyco_transf_4,Glycos_transf_1
BYD3_k127_1921109_17	272942.RCAP_rcc02119	2.42e-36	149.0	COG0500@1|root,COG2226@2|Bacteria	2|Bacteria	Q	methyltransferase	-	-	-	-	-	-	-	-	-	-	-	-	Glycos_transf_2,Methyltransf_11,Methyltransf_25
BYD3_k127_1921109_15	167542.P9515_07281	2.227e-45	171.0	COG1215@1|root,COG1215@2|Bacteria	2|Bacteria	M	transferase activity, transferring glycosyl groups	-	-	2.4.1.83	ko:K00721	ko00510,ko01100,map00510,map01100	-	R01009	RC00005	ko00000,ko00001,ko01000,ko01003	-	GT2	-	Glycos_transf_2
BYD3_k127_1921109_9	1123073.KB899241_gene2077	6.261e-68	237.0	COG0500@1|root,COG2226@2|Bacteria,1RFGA@1224|Proteobacteria,1TD1Q@1236|Gammaproteobacteria,1X9X8@135614|Xanthomonadales	135614|Xanthomonadales	Q	Methyltransferase domain	-	-	-	-	-	-	-	-	-	-	-	-	Methyltransf_11
BYD3_k127_1921109_2	1392491.JIAE01000001_gene1047	5.583e-170	538.0	COG0451@1|root,COG0451@2|Bacteria,1VP6I@1239|Firmicutes,251A8@186801|Clostridia	186801|Clostridia	M	epimerase dehydratase	-	-	4.2.1.46,5.1.3.2	ko:K01710,ko:K01784	ko00052,ko00520,ko00521,ko00523,ko00525,ko01055,ko01100,ko01130,map00052,map00520,map00521,map00523,map00525,map01055,map01100,map01130	M00361,M00362,M00632,M00793	R00291,R02984,R06513	RC00289,RC00402	ko00000,ko00001,ko00002,ko01000	-	-	-	Epimerase,GDP_Man_Dehyd
BYD3_k127_1921109_3	479431.Namu_4191	3.769e-129	423.0	COG0677@1|root,COG0677@2|Bacteria,2GK5K@201174|Actinobacteria,4ERD8@85013|Frankiales	201174|Actinobacteria	M	Belongs to the UDP-glucose GDP-mannose dehydrogenase family	-	-	1.1.1.336	ko:K02472	ko00520,ko05111,map00520,map05111	-	R03317	RC00291	ko00000,ko00001,ko01000	-	-	-	UDPG_MGDP_dh,UDPG_MGDP_dh_C,UDPG_MGDP_dh_N
BYD3_k127_1921109_12	272942.RCAP_rcc00166	1.054e-52	196.0	COG0457@1|root,COG0457@2|Bacteria,1NEP9@1224|Proteobacteria	1224|Proteobacteria	S	Sulfotransferase	-	-	-	-	-	-	-	-	-	-	-	-	Sulfotransfer_1,Sulfotransfer_3
BYD3_k127_1921109_19	622312.ROSEINA2194_02526	4.072e-22	111.0	COG3119@1|root,COG3119@2|Bacteria	2|Bacteria	P	arylsulfatase activity	-	-	-	-	-	-	-	-	-	-	-	-	Bac_rhamnosid6H,Bac_rhamnosid_C,Sulfatase
BYD3_k127_1921109_6	41431.PCC8801_2037	7.007e-94	319.0	COG4122@1|root,COG4122@2|Bacteria,1G4B7@1117|Cyanobacteria	1117|Cyanobacteria	S	Methyltransferase domain	-	-	-	-	-	-	-	-	-	-	-	-	Methyltransf_24
BYD3_k127_1921109_0	1380350.JIAP01000001_gene1597	1.538e-298	966.0	COG0438@1|root,COG1216@1|root,COG3562@1|root,COG0438@2|Bacteria,COG1216@2|Bacteria,COG3562@2|Bacteria,1MX5Z@1224|Proteobacteria,2TXYG@28211|Alphaproteobacteria,43MK0@69277|Phyllobacteriaceae	28211|Alphaproteobacteria	M	Glycosyltransferase WbsX	-	-	-	-	-	-	-	-	-	-	-	-	Glyco_tran_WbsX,Glyco_tranf_2_3,Glyco_trans_1_4,Glyco_transf_4,Glycos_transf_1,Glycos_transf_2
BYD3_k127_1921109_16	1071679.BG57_02270	1.771e-42	181.0	COG3754@1|root,COG3754@2|Bacteria,1QU2J@1224|Proteobacteria,2WH47@28216|Betaproteobacteria,1K57C@119060|Burkholderiaceae	28216|Betaproteobacteria	M	Rhamnan synthesis protein F	-	-	-	-	-	-	-	-	-	-	-	-	Glyco_tran_WbsX,RgpF
BYD3_k127_1921109_5	871968.DESME_14350	1.23e-96	327.0	COG3551@1|root,COG3551@2|Bacteria	2|Bacteria	J	Protein conserved in bacteria	-	-	-	ko:K20444	-	-	-	-	ko00000,ko01000,ko01005,ko02000	4.D.1.3	GT2,GT4	-	Glyco_trans_1_4,Glyco_transf_4,Glycos_transf_2,Sulfotransfer_3
BYD3_k127_1921109_7	342610.Patl_3221	3.667e-82	285.0	COG1216@1|root,COG1216@2|Bacteria,1RBVM@1224|Proteobacteria,1S34N@1236|Gammaproteobacteria	1236|Gammaproteobacteria	V	COG0463 Glycosyltransferases involved in cell wall biogenesis	-	-	-	-	-	-	-	-	-	-	-	-	Glycos_transf_2
BYD3_k127_1921109_10	1173024.KI912151_gene1780	5.729e-67	243.0	COG2227@1|root,COG2227@2|Bacteria	2|Bacteria	H	3-demethylubiquinone-9 3-O-methyltransferase activity	-	-	-	ko:K06219	-	-	-	-	ko00000	-	-	-	Glycos_transf_1,Glycos_transf_2,MethyTransf_Reg,Methyltransf_11,Methyltransf_23,Methyltransf_25,Methyltransf_31,TPR_2
BYD3_k127_1921109_4	580332.Slit_0610	2.782e-108	364.0	COG1216@1|root,COG5010@1|root,COG1216@2|Bacteria,COG5010@2|Bacteria,1RB30@1224|Proteobacteria,2WHYB@28216|Betaproteobacteria,44WN0@713636|Nitrosomonadales	28216|Betaproteobacteria	U	Glycosyltransferase like family 2	-	-	-	-	-	-	-	-	-	-	-	-	Glycos_transf_2
BYD3_k127_1921109_1	269799.Gmet_2332	4.411e-174	555.0	COG0399@1|root,COG0399@2|Bacteria,1MUPN@1224|Proteobacteria,42N6P@68525|delta/epsilon subdivisions,2WJVY@28221|Deltaproteobacteria	28221|Deltaproteobacteria	E	Belongs to the DegT DnrJ EryC1 family	-	-	2.6.1.33	ko:K20429	-	-	R02773	RC00006,RC00781	ko00000,ko01000	-	-	-	DegT_DnrJ_EryC1
BYD3_k127_1921109_14	574376.BAMA_14675	2.263e-46	176.0	COG4122@1|root,COG4122@2|Bacteria,1V1JR@1239|Firmicutes,4HHW6@91061|Bacilli	91061|Bacilli	S	WbqC-like protein family	-	-	-	-	-	-	-	-	-	-	-	-	WbqC
BYD3_k127_1921109_13	1122211.JMLW01000048_gene2476	2.062e-48	180.0	28HYD@1|root,2Z83U@2|Bacteria,1R5TY@1224|Proteobacteria,1RQN8@1236|Gammaproteobacteria	1236|Gammaproteobacteria	S	Sulfotransferase family	-	-	-	-	-	-	-	-	-	-	-	-	Sulfotransfer_3
BYD3_k127_1928061_5	1124780.ANNU01000043_gene342	6.584e-09	59.0	COG5002@1|root,COG5002@2|Bacteria,4NETP@976|Bacteroidetes,47JX1@768503|Cytophagia	976|Bacteroidetes	T	PFAM Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase	phoR	-	2.7.13.3	ko:K07636	ko02020,map02020	M00434	-	-	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	-	-	-	HATPase_c,HisKA
BYD3_k127_1928061_3	1237149.C900_01143	1.341e-119	387.0	COG0745@1|root,COG0745@2|Bacteria,4NG7D@976|Bacteroidetes,47MJ5@768503|Cytophagia	976|Bacteroidetes	T	Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain	-	-	-	ko:K07658	ko02020,map02020	M00434	-	-	ko00000,ko00001,ko00002,ko02022	-	-	-	Response_reg,Trans_reg_C
BYD3_k127_1928061_4	1237149.C900_01141	3.557e-104	348.0	COG4324@1|root,COG4324@2|Bacteria,4NF0V@976|Bacteroidetes,47NVX@768503|Cytophagia	976|Bacteroidetes	I	Putative aminopeptidase	-	-	-	-	-	-	-	-	-	-	-	-	Aminopep
BYD3_k127_1928061_0	1237149.C900_01139	5.119e-186	586.0	COG0468@1|root,COG0468@2|Bacteria,4NEXT@976|Bacteroidetes,47K6D@768503|Cytophagia	976|Bacteroidetes	L	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage	recA	-	-	ko:K03553	ko03440,map03440	M00729	-	-	ko00000,ko00001,ko00002,ko03400	-	-	-	RecA
BYD3_k127_1928061_2	1237149.C900_01138	4.073e-179	569.0	COG0577@1|root,COG0577@2|Bacteria,4NECN@976|Bacteroidetes,47J9P@768503|Cytophagia	976|Bacteroidetes	V	ABC-type antimicrobial peptide transport system, permease component	-	-	-	ko:K02004	-	M00258	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	FtsX,MacB_PCD
BYD3_k127_1928061_1	1279009.ADICEAN_03136	5.328e-180	568.0	COG0809@1|root,COG0809@2|Bacteria,4NF2T@976|Bacteroidetes,47J9B@768503|Cytophagia	976|Bacteroidetes	J	Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)	queA	-	2.4.99.17	ko:K07568	-	-	-	-	ko00000,ko01000,ko03016	-	-	-	Queuosine_synth
BYD3_k127_1945324_3	1237149.C900_02213	1.586e-83	282.0	COG1212@1|root,COG1212@2|Bacteria,4NG4B@976|Bacteroidetes,47M2Z@768503|Cytophagia	976|Bacteroidetes	M	Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria	kdsB	-	2.7.7.38	ko:K00979	ko00540,ko01100,map00540,map01100	M00063	R03351,R11396	RC00152,RC00910	ko00000,ko00001,ko00002,ko01000,ko01005	-	-	-	CTP_transf_3
BYD3_k127_1945324_2	929556.Solca_3038	1.057e-106	355.0	COG1647@1|root,COG1647@2|Bacteria,4NHPY@976|Bacteroidetes,1IQS4@117747|Sphingobacteriia	976|Bacteroidetes	S	Serine aminopeptidase, S33	-	-	-	-	-	-	-	-	-	-	-	-	Abhydrolase_1,Abhydrolase_6,BAAT_C,Hydrolase_4
BYD3_k127_1945324_0	1223410.KN050846_gene1375	8.432e-147	477.0	COG2373@1|root,COG2373@2|Bacteria,4P17V@976|Bacteroidetes	976|Bacteroidetes	S	Large extracellular alpha-helical protein	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_1945324_1	929556.Solca_0358	5.208e-141	460.0	COG1752@1|root,COG4775@1|root,COG1752@2|Bacteria,COG4775@2|Bacteria,4NDXY@976|Bacteroidetes,1IP0S@117747|Sphingobacteriia	976|Bacteroidetes	M	Patatin-like phospholipase	-	-	-	ko:K07001	-	-	-	-	ko00000	-	-	-	Bac_surface_Ag,POTRA,Patatin
BYD3_k127_1961252_6	1237149.C900_05338	8.206e-13	70.0	COG0745@1|root,COG0745@2|Bacteria,4NTZU@976|Bacteroidetes,47R2J@768503|Cytophagia	976|Bacteroidetes	KT	Response regulator receiver domain	-	-	-	-	-	-	-	-	-	-	-	-	Response_reg
BYD3_k127_1961252_5	1144313.PMI10_04255	7.841e-15	75.0	2EFZF@1|root,339RM@2|Bacteria,4NXMV@976|Bacteroidetes,1IDAM@117743|Flavobacteriia,2NXW9@237|Flavobacterium	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	TspO_MBR
BYD3_k127_1961252_2	1237149.C900_05332	1.618e-49	196.0	2C5U1@1|root,2Z80K@2|Bacteria,4NG4G@976|Bacteroidetes,47RZF@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	DUF748
BYD3_k127_1961252_4	1121890.AUDO01000007_gene2434	1.501e-19	89.0	2E6ZV@1|root,331IX@2|Bacteria,4NWV5@976|Bacteroidetes,1ID7N@117743|Flavobacteriia,2NXMA@237|Flavobacterium	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_1961252_0	1237149.C900_05328	1.918e-101	339.0	COG1295@1|root,COG1295@2|Bacteria,4NFG8@976|Bacteroidetes,47MBC@768503|Cytophagia	976|Bacteroidetes	S	Virulence factor BrkB	-	-	-	ko:K07058	-	-	-	-	ko00000	-	-	-	Virul_fac_BrkB
BYD3_k127_1961252_1	1121481.AUAS01000018_gene434	3.536e-85	295.0	COG0628@1|root,COG0628@2|Bacteria,4NFHZ@976|Bacteroidetes,47KDN@768503|Cytophagia	976|Bacteroidetes	S	AI-2E family transporter	-	-	-	-	-	-	-	-	-	-	-	-	AI-2E_transport
BYD3_k127_1961252_9	761193.Runsl_1365	1.029e-05	52.0	292W4@1|root,2ZQDM@2|Bacteria,4P8PZ@976|Bacteroidetes	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_1961252_3	485918.Cpin_1400	3.173e-47	190.0	COG2972@1|root,COG3292@1|root,COG2972@2|Bacteria,COG3292@2|Bacteria,4NFZB@976|Bacteroidetes,1IPPI@117747|Sphingobacteriia	976|Bacteroidetes	T	PFAM Signal transduction histidine kinase, internal region	-	-	-	-	-	-	-	-	-	-	-	-	His_kinase,Reg_prop,Y_Y_Y
BYD3_k127_1972629_12	1237149.C900_05136	1.058e-46	169.0	COG2086@1|root,COG2086@2|Bacteria,4NFWB@976|Bacteroidetes,47KZ2@768503|Cytophagia	976|Bacteroidetes	C	Electron transfer flavoprotein	etfB	-	-	ko:K03521	-	-	-	-	ko00000	-	-	-	ETF
BYD3_k127_1972629_5	1237149.C900_05135	7.333e-149	476.0	COG2025@1|root,COG2025@2|Bacteria,4NFSE@976|Bacteroidetes,47JUQ@768503|Cytophagia	976|Bacteroidetes	C	Electron transfer flavoprotein, alpha subunit	etfA	-	-	ko:K03522	-	-	-	-	ko00000,ko04147	-	-	-	ETF,ETF_alpha
BYD3_k127_1972629_7	1237149.C900_05134	3.473e-93	309.0	COG1259@1|root,COG1259@2|Bacteria,4NGSW@976|Bacteroidetes,47KJI@768503|Cytophagia	976|Bacteroidetes	L	PFAM Uncharacterised ACR, COG1259	-	-	-	ko:K08999	-	-	-	-	ko00000	-	-	-	DNase-RNase,UVR
BYD3_k127_1972629_3	1237149.C900_05133	4.386e-195	616.0	COG1972@1|root,COG1972@2|Bacteria,4NEYN@976|Bacteroidetes,47KKZ@768503|Cytophagia	976|Bacteroidetes	F	PFAM Na dependent nucleoside transporter	nupC	-	-	ko:K03317	-	-	-	-	ko00000	2.A.41	-	-	Gate,Nucleos_tra2_C,Nucleos_tra2_N
BYD3_k127_1972629_4	761193.Runsl_2021	1.058e-155	500.0	COG5434@1|root,COG5434@2|Bacteria,4NE9Y@976|Bacteroidetes,47KM6@768503|Cytophagia	976|Bacteroidetes	M	Periplasmic copper-binding protein (NosD)	-	-	-	-	-	-	-	-	-	-	-	-	Beta_helix
BYD3_k127_1972629_6	1123276.KB893257_gene2639	9.926e-123	403.0	COG5434@1|root,COG5434@2|Bacteria,4NFZJ@976|Bacteroidetes,47K9P@768503|Cytophagia	976|Bacteroidetes	M	Belongs to the glycosyl hydrolase 28 family	-	-	-	-	-	-	-	-	-	-	-	-	PSCyt1,fn3
BYD3_k127_1972629_10	1237149.C900_05831	2.743e-62	221.0	COG0566@1|root,COG0566@2|Bacteria,4NFH3@976|Bacteroidetes,47QCV@768503|Cytophagia	976|Bacteroidetes	J	Catalyzes the 2'-O methylation of guanosine at position 18 in tRNA	trmH	-	2.1.1.34	ko:K00556	-	-	-	-	ko00000,ko01000,ko03016	-	-	-	SpoU_methylase
BYD3_k127_1972629_9	1237149.C900_05832	6.323e-73	252.0	COG2949@1|root,COG2949@2|Bacteria,4NNQS@976|Bacteroidetes,47MWP@768503|Cytophagia	976|Bacteroidetes	S	DUF218 domain	-	-	-	ko:K03748	-	-	-	-	ko00000	-	-	-	DUF218
BYD3_k127_1972629_0	1237149.C900_05833	0.0	1050.0	COG4775@1|root,COG4775@2|Bacteria,4NDYT@976|Bacteroidetes,47MA1@768503|Cytophagia	976|Bacteroidetes	M	CarboxypepD_reg-like domain	-	-	-	-	-	-	-	-	-	-	-	-	CarbopepD_reg_2
BYD3_k127_1972629_1	1237149.C900_05835	0.0	1048.0	COG0441@1|root,COG0441@2|Bacteria,4NEFT@976|Bacteroidetes,47MA2@768503|Cytophagia	976|Bacteroidetes	J	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)	thrS	GO:0003674,GO:0003824,GO:0004812,GO:0004829,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006435,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576	6.1.1.3	ko:K01868	ko00970,map00970	M00359,M00360	R03663	RC00055,RC00523	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	-	-	-	HGTP_anticodon,TGS,tRNA-synt_2b,tRNA_SAD
BYD3_k127_1972629_8	1237149.C900_05836	5.943e-77	261.0	COG0290@1|root,COG0290@2|Bacteria,4NIZ5@976|Bacteroidetes,47PC6@768503|Cytophagia	976|Bacteroidetes	J	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins	infC	GO:0003674,GO:0003676,GO:0003723,GO:0003743,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006412,GO:0006413,GO:0006518,GO:0006807,GO:0006996,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016020,GO:0016043,GO:0019538,GO:0022411,GO:0032790,GO:0032984,GO:0032988,GO:0034641,GO:0034645,GO:0043021,GO:0043022,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1903008	-	ko:K02520	-	-	-	-	ko00000,ko03012,ko03029	-	-	-	IF3_C,IF3_N
BYD3_k127_1972629_15	1237149.C900_05837	1.961e-22	97.0	COG0291@1|root,COG0291@2|Bacteria,4NUVR@976|Bacteroidetes,47RYG@768503|Cytophagia	976|Bacteroidetes	J	Belongs to the bacterial ribosomal protein bL35 family	rpmI	GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904	-	ko:K02916	ko03010,map03010	M00178	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_L35p
BYD3_k127_1972629_11	1237149.C900_05838	1.662e-51	184.0	COG0292@1|root,COG0292@2|Bacteria,4NNKU@976|Bacteroidetes,47QDB@768503|Cytophagia	976|Bacteroidetes	J	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit	rplT	GO:0000027,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006996,GO:0008150,GO:0009987,GO:0015934,GO:0016043,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0042254,GO:0042255,GO:0042273,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043933,GO:0044085,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071826,GO:0071840,GO:1990904	-	ko:K02887	ko03010,map03010	M00178	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_L20
BYD3_k127_1972629_2	1237149.C900_05107	0.0	1031.0	COG2319@1|root,COG3064@1|root,COG2319@2|Bacteria,COG3064@2|Bacteria,4NEYQ@976|Bacteroidetes,47NKP@768503|Cytophagia	976|Bacteroidetes	M	WD40 repeats	-	-	-	-	-	-	-	-	-	-	-	-	WD40
BYD3_k127_1972629_14	1313421.JHBV01000026_gene405	6.753e-26	121.0	COG3047@1|root,COG3047@2|Bacteria,4PM1M@976|Bacteroidetes	976|Bacteroidetes	M	Outer membrane protein beta-barrel domain	-	-	-	-	-	-	-	-	-	-	-	-	OMP_b-brl_2
BYD3_k127_1972629_13	1237149.C900_05105	2.25e-28	130.0	COG1520@1|root,COG1520@2|Bacteria,4NEVC@976|Bacteroidetes,47KRP@768503|Cytophagia	976|Bacteroidetes	S	Endonuclease Exonuclease Phosphatase	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_1983485_12	1237149.C900_02722	0.0004981	44.0	COG4775@1|root,COG4775@2|Bacteria,4NE6Z@976|Bacteroidetes,47JEC@768503|Cytophagia	976|Bacteroidetes	M	Outer membrane protein assembly complex, YaeT protein	yaeT	-	-	ko:K07277	-	-	-	-	ko00000,ko02000,ko03029	1.B.33	-	-	Bac_surface_Ag,POTRA
BYD3_k127_1983485_3	1124780.ANNU01000005_gene2388	4.818e-113	369.0	COG0020@1|root,COG0020@2|Bacteria,4NF2B@976|Bacteroidetes,47MC0@768503|Cytophagia	976|Bacteroidetes	I	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids	uppS	GO:0002094,GO:0003674,GO:0003824,GO:0004659,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006066,GO:0006629,GO:0006720,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0009058,GO:0009987,GO:0016093,GO:0016094,GO:0016740,GO:0016765,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046165,GO:0071704,GO:1901576,GO:1901615,GO:1901617	2.5.1.31	ko:K00806	ko00900,ko01110,map00900,map01110	-	R06447	RC00279,RC02839	ko00000,ko00001,ko01000,ko01006	-	-	-	Prenyltransf
BYD3_k127_1983485_6	1237149.C900_02724	8.556e-88	295.0	COG3637@1|root,COG3637@2|Bacteria,4NF6B@976|Bacteroidetes,47PKF@768503|Cytophagia	976|Bacteroidetes	M	Outer membrane protein beta-barrel domain	-	-	-	-	-	-	-	-	-	-	-	-	OMP_b-brl
BYD3_k127_1983485_1	1237149.C900_02725	1.49e-116	385.0	COG2067@1|root,COG2067@2|Bacteria,4PKQK@976|Bacteroidetes,47XZ1@768503|Cytophagia	976|Bacteroidetes	I	long-chain fatty acid transport protein	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_1983485_2	1237149.C900_02726	1.529e-114	376.0	COG0061@1|root,COG0061@2|Bacteria,4NFG5@976|Bacteroidetes,47KI4@768503|Cytophagia	976|Bacteroidetes	G	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP	nadK	-	2.7.1.23	ko:K00858	ko00760,ko01100,map00760,map01100	-	R00104	RC00002,RC00078	ko00000,ko00001,ko01000	-	-	-	NAD_kinase
BYD3_k127_1983485_5	1237149.C900_02727	5.319e-89	298.0	COG0517@1|root,COG0517@2|Bacteria,4NF8G@976|Bacteroidetes,47PRP@768503|Cytophagia	976|Bacteroidetes	S	PFAM CBS domain	-	-	-	-	-	-	-	-	-	-	-	-	CBS
BYD3_k127_1983485_0	1237149.C900_02728	2.662e-124	402.0	COG2267@1|root,COG2267@2|Bacteria,4NF80@976|Bacteroidetes,47KEX@768503|Cytophagia	976|Bacteroidetes	I	alpha/beta hydrolase fold	pcbD	-	-	-	-	-	-	-	-	-	-	-	Abhydrolase_1
BYD3_k127_1983485_11	1124780.ANNU01000005_gene2381	3.898e-35	140.0	COG1286@1|root,COG1286@2|Bacteria,4NRG9@976|Bacteroidetes,47S9N@768503|Cytophagia	976|Bacteroidetes	S	PFAM Colicin V production protein	cvpA	-	-	ko:K03558	-	-	-	-	ko00000	-	-	-	Colicin_V
BYD3_k127_1983485_9	643867.Ftrac_1783	4.759e-50	182.0	COG1610@1|root,COG1610@2|Bacteria,4NQFI@976|Bacteroidetes,47QJ2@768503|Cytophagia	976|Bacteroidetes	S	PFAM Yqey-like protein	-	-	-	ko:K09117	-	-	-	-	ko00000	-	-	-	YqeY
BYD3_k127_1983485_4	1121373.KB903626_gene3298	2.508e-110	361.0	COG0854@1|root,COG0854@2|Bacteria,4NF4Z@976|Bacteroidetes,47K7U@768503|Cytophagia	976|Bacteroidetes	H	Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate	pdxJ	GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006725,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0008614,GO:0008615,GO:0009058,GO:0009110,GO:0009987,GO:0016740,GO:0016769,GO:0017144,GO:0018130,GO:0019438,GO:0033856,GO:0034641,GO:0042364,GO:0042816,GO:0042819,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:0072524,GO:0072525,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901615,GO:1901617	2.6.99.2	ko:K03474	ko00750,ko01100,map00750,map01100	M00124	R05838	RC01476	ko00000,ko00001,ko00002,ko01000	-	-	-	PdxJ
BYD3_k127_1983485_8	1237149.C900_02735	5.424e-56	203.0	COG3762@1|root,COG3762@2|Bacteria	2|Bacteria	S	Membrane	-	-	-	ko:K08988	-	-	-	-	ko00000	-	-	-	TPM_phosphatase
BYD3_k127_1983485_10	1121918.ARWE01000001_gene3055	2.113e-49	185.0	COG1512@1|root,COG1512@2|Bacteria,1PB41@1224|Proteobacteria,42R0Q@68525|delta/epsilon subdivisions,2WN87@28221|Deltaproteobacteria,43S55@69541|Desulfuromonadales	28221|Deltaproteobacteria	S	TPM domain	-	-	-	ko:K06872	-	-	-	-	ko00000	-	-	-	TPM_phosphatase
BYD3_k127_1983485_7	1237149.C900_02736	5.49e-65	230.0	COG1512@1|root,COG1512@2|Bacteria,4NF4P@976|Bacteroidetes,47NDD@768503|Cytophagia	976|Bacteroidetes	S	Beta-propeller domains of methanol dehydrogenase type	-	-	-	ko:K06872	-	-	-	-	ko00000	-	-	-	TPM_phosphatase
BYD3_k127_200092_1	1185876.BN8_06481	9.879e-94	321.0	COG2972@1|root,COG2972@2|Bacteria,4NH1Q@976|Bacteroidetes,47PMI@768503|Cytophagia	976|Bacteroidetes	T	Histidine kinase	-	-	-	-	-	-	-	-	-	-	-	-	His_kinase
BYD3_k127_200092_2	929556.Solca_0088	2.348e-76	263.0	COG3279@1|root,COG3279@2|Bacteria,4NI3K@976|Bacteroidetes,1J04H@117747|Sphingobacteriia	976|Bacteroidetes	K	Response regulator of the LytR AlgR family	-	-	-	-	-	-	-	-	-	-	-	-	LytTR,Response_reg
BYD3_k127_200092_0	1237149.C900_00367	2.462e-169	536.0	COG0276@1|root,COG0276@2|Bacteria,4NE83@976|Bacteroidetes,47JH0@768503|Cytophagia	976|Bacteroidetes	H	Catalyzes the ferrous insertion into protoporphyrin IX	hemH	-	4.99.1.1,4.99.1.9	ko:K01772	ko00860,ko01100,ko01110,map00860,map01100,map01110	M00121	R00310,R11329	RC01012	ko00000,ko00001,ko00002,ko01000	-	-	-	Ferrochelatase
BYD3_k127_200092_3	1237149.C900_00365	2.473e-32	127.0	COG0454@1|root,COG0456@2|Bacteria,4NFWE@976|Bacteroidetes,47M7W@768503|Cytophagia	976|Bacteroidetes	K	Psort location Cytoplasmic, score 8.96	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_2018570_2	1089547.KB913013_gene4441	1.033e-222	696.0	COG3696@1|root,COG3696@2|Bacteria,4NFD2@976|Bacteroidetes,47M26@768503|Cytophagia	976|Bacteroidetes	P	AcrB/AcrD/AcrF family	-	-	-	-	-	-	-	-	-	-	-	-	ACR_tran
BYD3_k127_2018570_0	1089547.KB913013_gene4443	0.0	1015.0	COG3696@1|root,COG3696@2|Bacteria,4P36A@976|Bacteroidetes,47N7N@768503|Cytophagia	976|Bacteroidetes	P	AcrB/AcrD/AcrF family	-	-	-	ko:K07787,ko:K15726	ko02020,map02020	-	-	-	ko00000,ko00001,ko02000	2.A.6.1.2,2.A.6.1.4	-	-	ACR_tran
BYD3_k127_2018570_4	926549.KI421517_gene1245	9.133e-132	432.0	COG1538@1|root,COG1538@2|Bacteria,4NFEC@976|Bacteroidetes,47KYU@768503|Cytophagia	976|Bacteroidetes	MU	Outer membrane efflux protein	-	-	-	-	-	-	-	-	-	-	-	-	OEP
BYD3_k127_2018570_5	1089547.KB913013_gene4445	1.36e-94	324.0	COG0845@1|root,COG0845@2|Bacteria,4NG8S@976|Bacteroidetes,47NGP@768503|Cytophagia	976|Bacteroidetes	M	Barrel-sandwich domain of CusB or HlyD membrane-fusion	-	-	-	ko:K07798	ko02020,map02020	-	-	-	ko00000,ko00001,ko02000	2.A.6.1.4,8.A.1	-	-	HlyD_3,HlyD_D23
BYD3_k127_2018570_6	1089547.KB913013_gene4446	5.183e-94	322.0	COG0845@1|root,COG0845@2|Bacteria,4NG8S@976|Bacteroidetes,47K97@768503|Cytophagia	976|Bacteroidetes	M	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family	-	-	-	ko:K07798,ko:K15727	ko02020,map02020	-	-	-	ko00000,ko00001,ko02000	2.A.6.1.4,8.A.1,8.A.1.2.1	-	-	DUF3347,HlyD_D23
BYD3_k127_2018570_11	385682.AFSL01000004_gene956	1.324e-39	155.0	COG0845@1|root,COG0845@2|Bacteria,4NG8S@976|Bacteroidetes,2FMQN@200643|Bacteroidia,3XIS8@558415|Marinilabiliaceae	976|Bacteroidetes	M	Protein of unknown function (DUF3347)	-	-	-	ko:K07798	ko02020,map02020	-	-	-	ko00000,ko00001,ko02000	2.A.6.1.4,8.A.1	-	-	DUF3347,HMA,HlyD_D23
BYD3_k127_2018570_3	1166018.FAES_pFAES01098	6.066e-156	507.0	COG2132@1|root,COG2132@2|Bacteria,4NE3N@976|Bacteroidetes,47KSB@768503|Cytophagia	976|Bacteroidetes	Q	PFAM multicopper oxidase type 3	-	-	-	-	-	-	-	-	-	-	-	-	Cu-oxidase,Cu-oxidase_2,Cu-oxidase_3
BYD3_k127_2018570_7	1121904.ARBP01000035_gene1766	1.148e-93	314.0	COG3182@1|root,COG3182@2|Bacteria,4NFK9@976|Bacteroidetes,47PES@768503|Cytophagia	976|Bacteroidetes	S	Iron-regulated membrane protein	-	-	-	-	-	-	-	-	-	-	-	-	PepSY_TM
BYD3_k127_2018570_9	1121904.ARBP01000008_gene3332	8.743e-46	170.0	COG1695@1|root,COG1695@2|Bacteria	2|Bacteria	K	negative regulation of transcription, DNA-templated	-	-	-	-	-	-	-	-	-	-	-	-	PadR
BYD3_k127_2018570_1	1121904.ARBP01000004_gene1108	2.85e-243	778.0	COG0577@1|root,COG0577@2|Bacteria,4NDUK@976|Bacteroidetes,47JJN@768503|Cytophagia	976|Bacteroidetes	V	FtsX-like permease family	-	-	-	-	-	-	-	-	-	-	-	-	FtsX,MacB_PCD
BYD3_k127_2018570_10	761193.Runsl_2940	3.029e-44	169.0	2976S@1|root,2ZUEM@2|Bacteria,4NPEH@976|Bacteroidetes,47Q3C@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_2018570_13	926556.Echvi_3579	3.076e-20	96.0	COG1672@1|root,COG1672@2|Bacteria,4NU5E@976|Bacteroidetes,47SH6@768503|Cytophagia	976|Bacteroidetes	S	Electron transfer DM13	-	-	-	-	-	-	-	-	-	-	-	-	DM13
BYD3_k127_2018570_8	929562.Emtol_2951	1.083e-60	217.0	COG3279@1|root,COG3279@2|Bacteria,4NF8S@976|Bacteroidetes,47JDI@768503|Cytophagia	976|Bacteroidetes	K	Response regulator of the LytR AlgR family	-	-	-	-	-	-	-	-	-	-	-	-	LytTR,Response_reg
BYD3_k127_2018570_12	1120968.AUBX01000014_gene2419	4.29e-21	97.0	COG2972@1|root,COG2972@2|Bacteria,4NGQZ@976|Bacteroidetes,47UFN@768503|Cytophagia	976|Bacteroidetes	T	Histidine kinase	-	-	-	-	-	-	-	-	-	-	-	-	His_kinase
BYD3_k127_2034280_2	1237149.C900_00905	2.392e-83	280.0	COG1386@1|root,COG1386@2|Bacteria,4NPG3@976|Bacteroidetes,47NG4@768503|Cytophagia	976|Bacteroidetes	D	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves	scpB	-	-	ko:K06024	-	-	-	-	ko00000,ko03036	-	-	-	SMC_ScpB
BYD3_k127_2034280_4	1237149.C900_00906	1.144e-49	188.0	COG1734@1|root,COG1734@2|Bacteria,4NNID@976|Bacteroidetes,47Q8I@768503|Cytophagia	976|Bacteroidetes	T	PFAM Prokaryotic dksA traR C4-type zinc finger	-	-	-	-	-	-	-	-	-	-	-	-	zf-dskA_traR
BYD3_k127_2034280_0	1408433.JHXV01000014_gene3642	1.58e-164	549.0	COG4288@1|root,COG4288@2|Bacteria,4NHM6@976|Bacteroidetes,1I8HX@117743|Flavobacteriia,2PAB4@246874|Cryomorphaceae	976|Bacteroidetes	S	Lamin Tail Domain	-	-	-	-	-	-	-	-	-	-	-	-	Big_5,CHU_C,LTD
BYD3_k127_2034280_1	1237149.C900_00911	3.535e-164	521.0	COG0136@1|root,COG0136@2|Bacteria,4NE4V@976|Bacteroidetes,47JMK@768503|Cytophagia	976|Bacteroidetes	E	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate	asd	-	1.2.1.11	ko:K00133	ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01210,map01230	M00016,M00017,M00018,M00033,M00525,M00526,M00527	R02291	RC00684	ko00000,ko00001,ko00002,ko01000	-	-	-	Semialdhyde_dh,Semialdhyde_dhC
BYD3_k127_2034280_3	1237149.C900_04501	3.522e-80	271.0	COG0145@1|root,COG0146@1|root,COG0145@2|Bacteria,COG0146@2|Bacteria,4NFBV@976|Bacteroidetes,47K85@768503|Cytophagia	976|Bacteroidetes	EQ	Hydantoinase/oxoprolinase	-	-	3.5.2.14,3.5.2.9	ko:K01469,ko:K01473	ko00330,ko00480,ko01100,map00330,map00480,map01100	-	R00251,R03187	RC00553,RC00632	ko00000,ko00001,ko01000	-	-	-	Hydant_A_N,Hydantoinase_A,Hydantoinase_B
BYD3_k127_2037298_1	1120951.AUBG01000002_gene1257	3.844e-09	68.0	COG2911@1|root,COG2911@2|Bacteria,4NF7F@976|Bacteroidetes,1HWPC@117743|Flavobacteriia	976|Bacteroidetes	M	Cell envelope biogenesis protein AsmA	-	-	-	-	-	-	-	-	-	-	-	-	TamB
BYD3_k127_2037298_0	714943.Mucpa_2768	2.26e-10	72.0	COG0823@1|root,COG1520@1|root,COG4447@1|root,COG5295@1|root,COG0823@2|Bacteria,COG1520@2|Bacteria,COG4447@2|Bacteria,COG5295@2|Bacteria,4NRP7@976|Bacteroidetes,1IU78@117747|Sphingobacteriia	976|Bacteroidetes	UW	protein related to plant photosystem II stability assembly factor	-	-	-	-	-	-	-	-	-	-	-	-	BNR,PSII_BNR
BYD3_k127_2040798_4	760192.Halhy_1439	7.768e-26	112.0	COG0671@1|root,COG0671@2|Bacteria,4NF9W@976|Bacteroidetes,1IV2I@117747|Sphingobacteriia	976|Bacteroidetes	I	PAP2 superfamily	-	-	-	-	-	-	-	-	-	-	-	-	PAP2
BYD3_k127_2040798_0	760192.Halhy_1438	0.0	1334.0	COG4888@1|root,COG4888@2|Bacteria,4NEE8@976|Bacteroidetes	976|Bacteroidetes	S	PFAM ASPIC and UnbV	-	-	-	-	-	-	-	-	-	-	-	-	UnbV_ASPIC,VCBS
BYD3_k127_2040798_3	1121904.ARBP01000019_gene2778	6.17e-195	619.0	COG3419@1|root,COG3419@2|Bacteria,4NGV9@976|Bacteroidetes,47MMR@768503|Cytophagia	976|Bacteroidetes	NU	Tfp pilus assembly protein tip-associated adhesin	-	-	-	-	-	-	-	-	-	-	-	-	PQQ,PQQ_2
BYD3_k127_2040798_1	1121904.ARBP01000019_gene2779	7.117e-269	834.0	COG4198@1|root,COG4198@2|Bacteria,4NEAX@976|Bacteroidetes,47M4K@768503|Cytophagia	976|Bacteroidetes	S	Starch-binding associating with outer membrane	-	-	-	-	-	-	-	-	-	-	-	-	SusD-like,SusD-like_2
BYD3_k127_2040798_2	1121904.ARBP01000019_gene2780	1.428e-195	613.0	COG1629@1|root,COG4771@2|Bacteria,4NDU8@976|Bacteroidetes,47M35@768503|Cytophagia	976|Bacteroidetes	P	PFAM TonB-dependent Receptor Plug	-	-	-	-	-	-	-	-	-	-	-	-	CarbopepD_reg_2,Plug,TonB_dep_Rec
BYD3_k127_20422_15	1207055.C100_15180	4.286e-15	78.0	29B0T@1|root,2ZXZQ@2|Bacteria,1ND25@1224|Proteobacteria,2UJ2J@28211|Alphaproteobacteria,2K6SU@204457|Sphingomonadales	204457|Sphingomonadales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_20422_2	485918.Cpin_1862	8.452e-135	437.0	COG0500@1|root,COG2226@2|Bacteria,4NGN8@976|Bacteroidetes,1IUWM@117747|Sphingobacteriia	976|Bacteroidetes	Q	O-methyltransferase	crtF	-	-	-	-	-	-	-	-	-	-	-	Methyltransf_2
BYD3_k127_20422_4	485918.Cpin_1861	3.622e-106	355.0	COG0304@1|root,COG0304@2|Bacteria,4NE8K@976|Bacteroidetes,1IPY4@117747|Sphingobacteriia	976|Bacteroidetes	IQ	Belongs to the beta-ketoacyl-ACP synthases family	fabF2	-	2.3.1.41	ko:K00647	ko00061,ko00780,ko01100,ko01212,map00061,map00780,map01100,map01212	M00083,M00572	R04355,R04726,R04952,R04957,R04960,R04963,R04968,R07762,R10115,R10119	RC00039,RC02728,RC02729,RC02888	ko00000,ko00001,ko00002,ko01000,ko01004	-	-	-	Ketoacyl-synt_C,ketoacyl-synt
BYD3_k127_20422_9	485918.Cpin_1860	4.387e-51	184.0	COG0824@1|root,COG0824@2|Bacteria,4NRHH@976|Bacteroidetes,1ITSJ@117747|Sphingobacteriia	976|Bacteroidetes	S	Thioesterase-like superfamily	-	-	-	ko:K07107	-	-	-	-	ko00000,ko01000	-	-	-	4HBT,4HBT_2
BYD3_k127_20422_10	1121373.KB903621_gene1801	3.934e-37	148.0	2E7GE@1|root,331Z7@2|Bacteria,4NWN3@976|Bacteroidetes,47RY7@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_20422_11	1122605.KB893647_gene250	8.948e-35	137.0	COG4706@1|root,COG4706@2|Bacteria,4NSB5@976|Bacteroidetes,1IU4J@117747|Sphingobacteriia	976|Bacteroidetes	I	dehydratase	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_20422_13	485918.Cpin_1857	2.935e-32	128.0	COG4261@1|root,COG4261@2|Bacteria,4NF49@976|Bacteroidetes,1IT2S@117747|Sphingobacteriia	976|Bacteroidetes	S	Bacterial lipid A biosynthesis acyltransferase	-	-	-	-	-	-	-	-	-	-	-	-	Lip_A_acyltrans
BYD3_k127_20422_7	485918.Cpin_1857	2.908e-70	242.0	COG4261@1|root,COG4261@2|Bacteria,4NF49@976|Bacteroidetes,1IT2S@117747|Sphingobacteriia	976|Bacteroidetes	S	Bacterial lipid A biosynthesis acyltransferase	-	-	-	-	-	-	-	-	-	-	-	-	Lip_A_acyltrans
BYD3_k127_20422_14	153721.MYP_4252	3.961e-29	118.0	COG0236@1|root,COG0236@2|Bacteria,4NV57@976|Bacteroidetes,47SD1@768503|Cytophagia	976|Bacteroidetes	IQ	acyl carrier protein	acpP_2	-	-	ko:K02078	-	-	-	-	ko00000,ko00001	-	-	-	PP-binding
BYD3_k127_20422_1	485918.Cpin_1855	3.718e-200	629.0	COG0304@1|root,COG0304@2|Bacteria,4NFBN@976|Bacteroidetes,1IR9V@117747|Sphingobacteriia	976|Bacteroidetes	IQ	Belongs to the beta-ketoacyl-ACP synthases family	fabB	-	2.3.1.41	ko:K00647	ko00061,ko00780,ko01100,ko01212,map00061,map00780,map01100,map01212	M00083,M00572	R04355,R04726,R04952,R04957,R04960,R04963,R04968,R07762,R10115,R10119	RC00039,RC02728,RC02729,RC02888	ko00000,ko00001,ko00002,ko01000,ko01004	-	-	-	Ketoacyl-synt_C,ketoacyl-synt
BYD3_k127_20422_5	153721.MYP_4250	1.441e-102	338.0	COG1028@1|root,COG1028@2|Bacteria,4NFTU@976|Bacteroidetes,47N90@768503|Cytophagia	976|Bacteroidetes	IQ	KR domain	fabG3	-	1.1.1.100,1.1.1.36	ko:K00023,ko:K00059	ko00061,ko00333,ko00630,ko00650,ko00780,ko01040,ko01100,ko01120,ko01130,ko01200,ko01212,map00061,map00333,map00630,map00650,map00780,map01040,map01100,map01120,map01130,map01200,map01212	M00083,M00373,M00572	R01779,R01977,R04533,R04534,R04536,R04543,R04566,R04953,R04964,R07759,R07763,R10116,R10120,R11671	RC00029,RC00103,RC00117	ko00000,ko00001,ko00002,ko01000,ko01004	-	-	-	adh_short_C2
BYD3_k127_20422_0	485918.Cpin_1853	2.021e-206	655.0	COG2986@1|root,COG2986@2|Bacteria,4NE0D@976|Bacteroidetes,1IQ55@117747|Sphingobacteriia	976|Bacteroidetes	E	Aromatic amino acid lyase	hutH	-	4.3.1.23,4.3.1.3	ko:K01745,ko:K10774	ko00340,ko00350,ko01100,map00340,map00350,map01100	M00045	R00737,R01168	RC00361	ko00000,ko00001,ko00002,ko01000	-	-	-	Lyase_aromatic
BYD3_k127_20422_16	1207055.C100_14695	9.546e-09	57.0	COG2335@1|root,COG2335@2|Bacteria,1RD06@1224|Proteobacteria,2U7H5@28211|Alphaproteobacteria,2K1N1@204457|Sphingomonadales	204457|Sphingomonadales	M	Four repeated domains in the Fasciclin I family of proteins, present in many other contexts.	-	-	-	-	-	-	-	-	-	-	-	-	Fasciclin
BYD3_k127_20422_12	1239962.C943_03791	2.365e-34	136.0	COG3495@1|root,COG3495@2|Bacteria,4NMZ8@976|Bacteroidetes,47P8H@768503|Cytophagia	976|Bacteroidetes	S	Protein conserved in bacteria	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_20422_3	1121904.ARBP01000007_gene2978	2.997e-119	396.0	COG0577@1|root,COG0577@2|Bacteria,4NF60@976|Bacteroidetes,47KE0@768503|Cytophagia	976|Bacteroidetes	V	ABC-type transport system involved in lipoprotein release permease component	-	-	-	ko:K02004	-	M00258	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	FtsX,MacB_PCD
BYD3_k127_20422_8	1313421.JHBV01000005_gene4617	1.328e-60	215.0	COG1136@1|root,COG1136@2|Bacteria,4NNS2@976|Bacteroidetes,1IS7P@117747|Sphingobacteriia	976|Bacteroidetes	V	ABC transporter	-	-	-	ko:K02003	-	M00258	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	ABC_tran
BYD3_k127_20422_6	1120965.AUBV01000015_gene1058	1.014e-75	269.0	COG5337@1|root,COG5337@2|Bacteria,4P3EE@976|Bacteroidetes	976|Bacteroidetes	M	CotH kinase protein	-	-	-	ko:K06330	-	-	-	-	ko00000	-	-	-	CotH
BYD3_k127_2047411_0	1123277.KB893195_gene5693	9.057e-124	426.0	COG0577@1|root,COG0577@2|Bacteria,4NDUK@976|Bacteroidetes,47JJN@768503|Cytophagia	976|Bacteroidetes	V	FtsX-like permease family	-	-	-	ko:K02004	-	M00258	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	FtsX,MacB_PCD
BYD3_k127_2058751_1	1185876.BN8_01483	1.36e-63	222.0	COG1225@1|root,COG1225@2|Bacteria,4NNGK@976|Bacteroidetes,47PUA@768503|Cytophagia	976|Bacteroidetes	O	PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen	bcp	-	1.11.1.15	ko:K03564	-	-	-	-	ko00000,ko01000	-	-	-	AhpC-TSA
BYD3_k127_2058751_0	1121904.ARBP01000001_gene5684	1.121e-259	818.0	COG4993@1|root,COG4993@2|Bacteria,4NFK0@976|Bacteroidetes,47KDI@768503|Cytophagia	976|Bacteroidetes	G	Pyrrolo-quinoline quinone	-	-	1.1.5.2	ko:K00117	ko00030,ko01100,ko01110,ko01130,map00030,map01100,map01110,map01130	-	R06620	RC00066	ko00000,ko00001,ko01000	-	-	-	Cytochrome_CBB3,PQQ
BYD3_k127_2058751_2	1121288.AULL01000017_gene2494	2.615e-57	203.0	COG0698@1|root,COG0698@2|Bacteria,4NP5D@976|Bacteroidetes,1I2XE@117743|Flavobacteriia,3ZS6C@59732|Chryseobacterium	976|Bacteroidetes	G	Ribose/Galactose Isomerase	-	-	5.3.1.6	ko:K01808	ko00030,ko00051,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00051,map00710,map01100,map01110,map01120,map01130,map01200,map01230	M00004,M00007,M00165,M00167	R01056,R09030	RC00376,RC00434	ko00000,ko00001,ko00002,ko01000	-	-	-	LacAB_rpiB
BYD3_k127_2058751_3	714943.Mucpa_6661	3.507e-41	154.0	COG0362@1|root,COG0362@2|Bacteria,4NG05@976|Bacteroidetes,1IPZC@117747|Sphingobacteriia	976|Bacteroidetes	G	Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH	gnd	-	1.1.1.343,1.1.1.44	ko:K00033	ko00030,ko00480,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map00480,map01100,map01110,map01120,map01130,map01200	M00004,M00006	R01528,R10221	RC00001,RC00539	ko00000,ko00001,ko00002,ko01000	-	-	-	6PGD,NAD_binding_2
BYD3_k127_2063219_6	485918.Cpin_6175	2.239e-66	235.0	COG1680@1|root,COG1680@2|Bacteria,4NPES@976|Bacteroidetes,1IT4Q@117747|Sphingobacteriia	976|Bacteroidetes	V	Domain of unknown function (DUF3471)	-	-	-	-	-	-	-	-	-	-	-	-	DUF3471,DUF4440
BYD3_k127_2063219_8	471854.Dfer_4855	8.178e-29	119.0	2E0NT@1|root,32W7U@2|Bacteria,4NTP9@976|Bacteroidetes,47ST3@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_2063219_7	1123277.KB893181_gene2298	7.098e-60	213.0	COG1595@1|root,COG1595@2|Bacteria,4NSVA@976|Bacteroidetes,47QAU@768503|Cytophagia	976|Bacteroidetes	K	TIGRFAM RNA polymerase sigma factor, sigma-70 family	-	-	-	ko:K03088	-	-	-	-	ko00000,ko03021	-	-	-	Sigma70_r2,Sigma70_r4_2
BYD3_k127_2063219_0	926549.KI421517_gene2441	6.663e-172	552.0	COG4784@1|root,COG4784@2|Bacteria,4PM59@976|Bacteroidetes,47MK2@768503|Cytophagia	976|Bacteroidetes	S	Peptidase family M48	-	-	-	-	-	-	-	-	-	-	-	-	Peptidase_M48
BYD3_k127_2063219_1	1267535.KB906767_gene3033	2.239e-140	453.0	COG0823@1|root,COG0823@2|Bacteria	2|Bacteria	U	Involved in the tonB-independent uptake of proteins	-	-	-	ko:K03641	-	-	-	-	ko00000,ko02000	2.C.1.2	-	-	PD40
BYD3_k127_2063219_2	1121904.ARBP01000014_gene137	3.762e-120	394.0	COG3802@1|root,COG3802@2|Bacteria,4NGIM@976|Bacteroidetes,47TKS@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_2063219_5	1185876.BN8_00900	1.671e-69	250.0	COG0577@1|root,COG0577@2|Bacteria,4NDUK@976|Bacteroidetes,47NTJ@768503|Cytophagia	976|Bacteroidetes	V	MacB-like periplasmic core domain	-	-	-	ko:K02004	-	M00258	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	FtsX,MacB_PCD
BYD3_k127_2063219_4	1121904.ARBP01000004_gene1059	6.468e-93	320.0	COG0577@1|root,COG0577@2|Bacteria,4NDUK@976|Bacteroidetes,47NTJ@768503|Cytophagia	976|Bacteroidetes	V	MacB-like periplasmic core domain	-	-	-	ko:K02004	-	M00258	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	FtsX,MacB_PCD
BYD3_k127_2063219_3	926549.KI421517_gene3538	1.416e-100	333.0	COG1985@1|root,COG1985@2|Bacteria,4PAUI@976|Bacteroidetes,47V1G@768503|Cytophagia	976|Bacteroidetes	H	RibD C-terminal domain	-	-	-	-	-	-	-	-	-	-	-	-	RibD_C
BYD3_k127_2098545_3	1237149.C900_05890	2.25e-31	125.0	COG3291@1|root,COG3291@2|Bacteria,4NDU9@976|Bacteroidetes,47MS8@768503|Cytophagia	976|Bacteroidetes	M	C-terminal domain of CHU protein family	-	-	-	-	-	-	-	-	-	-	-	-	CHU_C,PKD
BYD3_k127_2098545_1	1453505.JASY01000013_gene4327	1.522e-51	187.0	COG3871@1|root,COG3871@2|Bacteria,4NNGC@976|Bacteroidetes,1I1XY@117743|Flavobacteriia,2NWBT@237|Flavobacterium	976|Bacteroidetes	S	general stress protein	-	-	-	-	-	-	-	-	-	-	-	-	Pyrid_ox_like
BYD3_k127_2098545_2	1120966.AUBU01000003_gene1537	1.155e-47	173.0	COG2329@1|root,COG2329@2|Bacteria,4NS8X@976|Bacteroidetes,47RR3@768503|Cytophagia	976|Bacteroidetes	S	involved in biosynthesis of extracellular polysaccharides	-	-	-	-	-	-	-	-	-	-	-	-	ABM
BYD3_k127_2098545_4	929556.Solca_0464	2.449e-31	134.0	COG2169@1|root,COG2169@2|Bacteria	2|Bacteria	K	sequence-specific DNA binding	-	-	2.1.1.63,3.1.31.1,3.2.2.21	ko:K01174,ko:K07720,ko:K10778,ko:K13529,ko:K15051	ko02020,ko03410,map02020,map03410	M00519	-	-	ko00000,ko00001,ko00002,ko01000,ko02022,ko03000,ko03400	-	-	-	Ada_Zn_binding,AraC_N,DNA_binding_1,Endonuclea_NS_2,HTH_18,PocR
BYD3_k127_2098545_6	797299.HALLA_21105	5.869e-13	78.0	COG5485@1|root,arCOG06513@2157|Archaea,2XYRZ@28890|Euryarchaeota,23WU7@183963|Halobacteria	183963|Halobacteria	S	ester cyclase	-	-	-	-	-	-	-	-	-	-	-	-	SnoaL
BYD3_k127_2098545_5	1121373.KB903640_gene3741	2.609e-24	106.0	2E4RV@1|root,32ZKD@2|Bacteria,4NWUE@976|Bacteroidetes,47W7C@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_2098545_0	452637.Oter_0554	4.22e-149	487.0	COG1236@1|root,COG1236@2|Bacteria,46UFS@74201|Verrucomicrobia	74201|Verrucomicrobia	J	Beta-Casp domain	-	-	-	ko:K07576	-	-	-	-	ko00000	-	-	-	Beta-Casp,Lactamase_B,Lactamase_B_6,RMMBL
BYD3_k127_2098545_7	1189612.A33Q_2380	6.023e-11	67.0	COG4191@1|root,COG4191@2|Bacteria,4NEJX@976|Bacteroidetes,47U6P@768503|Cytophagia	976|Bacteroidetes	T	SnoaL-like domain	-	-	-	-	-	-	-	-	-	-	-	-	HATPase_c,HisKA,SnoaL_3
BYD3_k127_2110567_3	929556.Solca_1941	3.929e-09	57.0	COG0560@1|root,COG0560@2|Bacteria,4NIF2@976|Bacteroidetes	976|Bacteroidetes	E	haloacid dehalogenase-like hydrolase	-	-	-	-	-	-	-	-	-	-	-	-	HAD
BYD3_k127_2110567_2	468059.AUHA01000002_gene990	7.044e-107	354.0	COG0861@1|root,COG0861@2|Bacteria,4NH7P@976|Bacteroidetes,1IQW6@117747|Sphingobacteriia	976|Bacteroidetes	P	Integral membrane protein TerC	-	-	-	ko:K05794	-	-	-	-	ko00000	-	-	-	TerC
BYD3_k127_2110567_0	1492737.FEM08_24380	2.405e-201	636.0	COG4580@1|root,COG4580@2|Bacteria,4NHB0@976|Bacteroidetes,1ICN1@117743|Flavobacteriia,2NTIX@237|Flavobacterium	976|Bacteroidetes	G	LamB porin	-	-	-	ko:K02024	-	-	-	-	ko00000,ko02000	1.B.3.1.1	-	-	LamB
BYD3_k127_2110567_1	760192.Halhy_4103	5.044e-142	455.0	COG0577@1|root,COG0577@2|Bacteria,4NDUK@976|Bacteroidetes,1INWS@117747|Sphingobacteriia	976|Bacteroidetes	V	InterPro IPR003838	-	-	-	-	-	-	-	-	-	-	-	-	FtsX,MacB_PCD
BYD3_k127_2117495_5	391587.KAOT1_19442	5.558e-25	106.0	29Q4T@1|root,30B3K@2|Bacteria,4NPGB@976|Bacteroidetes,1I3Q0@117743|Flavobacteriia	976|Bacteroidetes	S	23S rRNA-intervening sequence protein	-	-	-	-	-	-	-	-	-	-	-	-	23S_rRNA_IVP
BYD3_k127_2117495_2	643867.Ftrac_0613	6.684e-91	318.0	COG2203@1|root,COG2203@2|Bacteria	2|Bacteria	T	Gaf domain	-	-	-	-	-	-	-	-	-	-	-	-	4HB_MCP_1,GAF_2,HATPase_c,HisKA,PAS_9,Response_reg
BYD3_k127_2117495_0	1237149.C900_01475	7.25e-147	486.0	COG0642@1|root,COG2205@2|Bacteria,4NN26@976|Bacteroidetes	976|Bacteroidetes	T	7TM diverse intracellular signalling	-	-	-	-	-	-	-	-	-	-	-	-	7TMR-DISM_7TM,HATPase_c,HisKA
BYD3_k127_2117495_1	1123057.P872_16720	5.656e-91	303.0	COG0664@1|root,COG0664@2|Bacteria,4NJRX@976|Bacteroidetes,47QTJ@768503|Cytophagia	976|Bacteroidetes	T	Cyclic nucleotide-binding domain	-	-	-	-	-	-	-	-	-	-	-	-	cNMP_binding
BYD3_k127_2117495_3	1131812.JQMS01000001_gene2850	1.53e-78	269.0	COG2085@1|root,COG2085@2|Bacteria,4NEC7@976|Bacteroidetes,1I1WM@117743|Flavobacteriia,2NW2K@237|Flavobacterium	976|Bacteroidetes	S	Shikimate / quinate 5-dehydrogenase	-	-	1.5.1.40	ko:K06988	-	-	-	-	ko00000,ko01000	-	-	-	F420_oxidored
BYD3_k127_2117495_4	1168034.FH5T_18105	6.715e-26	111.0	COG3403@1|root,COG3403@2|Bacteria,4NHNG@976|Bacteroidetes	976|Bacteroidetes	S	YqcI/YcgG family	-	-	-	-	-	-	-	-	-	-	-	-	DUF1080
BYD3_k127_2126833_1	929556.Solca_2535	1.034e-113	372.0	COG3696@1|root,COG3696@2|Bacteria,4P36A@976|Bacteroidetes,1IP0C@117747|Sphingobacteriia	976|Bacteroidetes	P	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family	-	-	-	ko:K07787,ko:K15726	ko02020,map02020	-	-	-	ko00000,ko00001,ko02000	2.A.6.1.2,2.A.6.1.4	-	-	ACR_tran
BYD3_k127_2126833_0	1450525.JATV01000009_gene822	7.535e-178	566.0	COG3696@1|root,COG3696@2|Bacteria,4NFD2@976|Bacteroidetes,1I1AN@117743|Flavobacteriia,2NSUT@237|Flavobacterium	976|Bacteroidetes	P	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family	-	-	-	-	-	-	-	-	-	-	-	-	ACR_tran
BYD3_k127_2126833_2	1028801.RG1141_PA11370	9.385e-08	57.0	2BQZQ@1|root,32JX2@2|Bacteria,1RJP3@1224|Proteobacteria,2V5ZF@28211|Alphaproteobacteria,4BFCG@82115|Rhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	Polyketide_cyc2
BYD3_k127_2138550_1	1227739.Hsw_1451	1.432e-83	283.0	COG1985@1|root,COG1985@2|Bacteria,4PAUI@976|Bacteroidetes,47V1G@768503|Cytophagia	976|Bacteroidetes	H	RibD C-terminal domain	-	-	-	-	-	-	-	-	-	-	-	-	RibD_C
BYD3_k127_2138550_6	1237149.C900_04106	2.747e-48	177.0	COG0640@1|root,COG0640@2|Bacteria,4NQ33@976|Bacteroidetes,47QAK@768503|Cytophagia	976|Bacteroidetes	K	helix_turn_helix, Arsenical Resistance Operon Repressor	-	-	-	-	-	-	-	-	-	-	-	-	HTH_20,HTH_5
BYD3_k127_2138550_3	760192.Halhy_4088	3.179e-73	249.0	COG3832@1|root,COG3832@2|Bacteria,4NM7P@976|Bacteroidetes,1ISPW@117747|Sphingobacteriia	976|Bacteroidetes	S	PFAM Activator of Hsp90 ATPase	-	-	-	-	-	-	-	-	-	-	-	-	AHSA1
BYD3_k127_2138550_5	991.IW20_21560	5.182e-59	208.0	COG2259@1|root,31BQE@2|Bacteria,4NQH2@976|Bacteroidetes,1I2VX@117743|Flavobacteriia,2NWSB@237|Flavobacterium	976|Bacteroidetes	S	DoxX-like family	-	-	-	-	-	-	-	-	-	-	-	-	DoxX_2
BYD3_k127_2138550_0	1123277.KB893195_gene5741	9.87e-87	290.0	COG0262@1|root,COG0262@2|Bacteria,4NHIH@976|Bacteroidetes	976|Bacteroidetes	H	RibD C-terminal domain	-	-	-	-	-	-	-	-	-	-	-	-	RibD_C
BYD3_k127_2138550_2	44251.PDUR_13465	8.859e-78	263.0	COG4430@1|root,COG4430@2|Bacteria,1UYP9@1239|Firmicutes,4HDZD@91061|Bacilli,26RX5@186822|Paenibacillaceae	91061|Bacilli	S	Bacteriocin-protection, YdeI or OmpD-Associated	ydeI	-	-	-	-	-	-	-	-	-	-	-	DUF1801,OmdA
BYD3_k127_2154510_1	760192.Halhy_3296	4.135e-70	242.0	COG0399@1|root,COG0399@2|Bacteria,4NEBI@976|Bacteroidetes,1IPSU@117747|Sphingobacteriia	976|Bacteroidetes	E	COGs COG0399 pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis	eryC	-	-	-	-	-	-	-	-	-	-	-	DegT_DnrJ_EryC1
BYD3_k127_2154510_0	1237149.C900_02861	0.0	1214.0	COG1807@1|root,COG1807@2|Bacteria,4PKJX@976|Bacteroidetes,47KCA@768503|Cytophagia	976|Bacteroidetes	M	Protein of unknown function (DUF2723)	-	-	-	-	-	-	-	-	-	-	-	-	DUF2723
BYD3_k127_2176155_0	700598.Niako_4070	3.315e-166	533.0	COG0841@1|root,COG0841@2|Bacteria	2|Bacteria	V	transmembrane transporter activity	-	-	-	-	-	-	-	-	-	-	-	-	ACR_tran
BYD3_k127_2176155_2	700598.Niako_4069	8.439e-85	293.0	COG0845@1|root,COG0845@2|Bacteria,4NZYI@976|Bacteroidetes	976|Bacteroidetes	M	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family	-	-	-	-	-	-	-	-	-	-	-	-	HlyD_D23
BYD3_k127_2176155_1	1079460.ATTQ01000029_gene4714	1.252e-89	302.0	COG0702@1|root,COG0702@2|Bacteria,1MYVU@1224|Proteobacteria,2TTHA@28211|Alphaproteobacteria,4B78T@82115|Rhizobiaceae	28211|Alphaproteobacteria	GM	NmrA-like family	-	-	-	-	-	-	-	-	-	-	-	-	NAD_binding_10
BYD3_k127_2177578_4	1237149.C900_04581	1.53e-107	359.0	COG2972@1|root,COG2972@2|Bacteria,4NI09@976|Bacteroidetes,47K66@768503|Cytophagia	976|Bacteroidetes	T	Histidine kinase	-	-	-	-	-	-	-	-	-	-	-	-	His_kinase
BYD3_k127_2177578_3	1237149.C900_04582	5.245e-120	388.0	COG3279@1|root,COG3279@2|Bacteria,4NFWA@976|Bacteroidetes,47N62@768503|Cytophagia	976|Bacteroidetes	T	Response regulator of the LytR AlgR family	-	-	-	ko:K02477	-	-	-	-	ko00000,ko02022	-	-	-	LytTR,Response_reg
BYD3_k127_2177578_1	926549.KI421517_gene466	7.371e-167	536.0	COG0513@1|root,COG0513@2|Bacteria,4NEVI@976|Bacteroidetes,47M9H@768503|Cytophagia	976|Bacteroidetes	L	Belongs to the DEAD box helicase family	-	-	3.6.4.13	ko:K11927	ko03018,map03018	-	-	-	ko00000,ko00001,ko01000,ko03019	-	-	-	DEAD,Helicase_C
BYD3_k127_2177578_0	1237149.C900_01785	2.849e-211	664.0	COG0044@1|root,COG0044@2|Bacteria,4NE3T@976|Bacteroidetes,47JPG@768503|Cytophagia	976|Bacteroidetes	F	TIGRFAM dihydroorotase, multifunctional complex type	pyrC	-	3.5.2.3	ko:K01465	ko00240,ko01100,map00240,map01100	M00051	R01993	RC00632	ko00000,ko00001,ko00002,ko01000	-	-	-	Amidohydro_1
BYD3_k127_2177578_7	1237149.C900_01784	3.972e-27	112.0	2EDEU@1|root,337B5@2|Bacteria,4NVH5@976|Bacteroidetes,47SHQ@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_2177578_6	504472.Slin_2511	4.072e-55	196.0	COG3350@1|root,COG3350@2|Bacteria,4NS9P@976|Bacteroidetes,47Q9E@768503|Cytophagia	976|Bacteroidetes	S	monooxygenase activity	-	-	-	-	-	-	-	-	-	-	-	-	YHS
BYD3_k127_2177578_2	1124780.ANNU01000050_gene2106	2.496e-147	474.0	COG0709@1|root,COG0709@2|Bacteria,4NI4R@976|Bacteroidetes,47JJA@768503|Cytophagia	976|Bacteroidetes	E	Synthesizes selenophosphate from selenide and ATP	selD	-	2.7.9.3	ko:K01008	ko00450,ko01100,map00450,map01100	-	R03595	RC00002,RC02878	ko00000,ko00001,ko01000,ko03016	-	-	-	AIRS,AIRS_C
BYD3_k127_2177578_5	1434325.AZQN01000004_gene1780	5.256e-75	254.0	COG1611@1|root,COG1611@2|Bacteria,4NF20@976|Bacteroidetes,47M0E@768503|Cytophagia	976|Bacteroidetes	S	Belongs to the LOG family	fmt2	-	3.2.2.10	ko:K06966	ko00230,ko00240,map00230,map00240	-	R00182,R00510	RC00063,RC00318	ko00000,ko00001,ko01000	-	-	-	Lysine_decarbox
BYD3_k127_2177880_1	1121481.AUAS01000007_gene1085	3.915e-131	430.0	COG1629@1|root,COG4771@2|Bacteria,4NEIG@976|Bacteroidetes,47JGS@768503|Cytophagia	976|Bacteroidetes	P	TonB-dependent Receptor Plug	-	-	-	-	-	-	-	-	-	-	-	-	CarbopepD_reg_2,CarboxypepD_reg,OMP_b-brl_3,Plug
BYD3_k127_2177880_5	761193.Runsl_1328	4.544e-21	95.0	COG0262@1|root,COG0262@2|Bacteria,4NJIQ@976|Bacteroidetes,47PHT@768503|Cytophagia	976|Bacteroidetes	H	RibD C-terminal domain	-	-	1.5.1.3	ko:K00287	ko00670,ko00790,ko01100,ko01523,map00670,map00790,map01100,map01523	M00126,M00840	R00936,R00937,R00939,R00940,R02235,R02236,R11765	RC00109,RC00110,RC00158	ko00000,ko00001,ko00002,ko01000	-	-	-	RibD_C
BYD3_k127_2177880_3	485918.Cpin_6691	2.818e-37	143.0	COG0262@1|root,COG0262@2|Bacteria,4NJIQ@976|Bacteroidetes,1IWPD@117747|Sphingobacteriia	976|Bacteroidetes	H	bifunctional deaminase-reductase domain protein	-	-	1.5.1.3	ko:K00287	ko00670,ko00790,ko01100,ko01523,map00670,map00790,map01100,map01523	M00126,M00840	R00936,R00937,R00939,R00940,R02235,R02236,R11765	RC00109,RC00110,RC00158	ko00000,ko00001,ko00002,ko01000	-	-	-	RibD_C
BYD3_k127_2177880_4	1173020.Cha6605_6217	3.363e-35	143.0	COG0703@1|root,COG0703@2|Bacteria	2|Bacteria	F	shikimate kinase activity	-	-	-	-	-	-	-	-	-	-	-	-	AAA_18,SKI
BYD3_k127_2177880_0	1123248.KB893352_gene1783	2.839e-143	480.0	COG4191@1|root,COG4191@2|Bacteria,4NEJX@976|Bacteroidetes	976|Bacteroidetes	T	Histidine kinase	-	-	-	-	-	-	-	-	-	-	-	-	HATPase_c,HisKA,TPR_12,TPR_8
BYD3_k127_2177880_2	1124780.ANNU01000003_gene1422	2.079e-69	243.0	COG5000@1|root,COG5000@2|Bacteria,4NE49@976|Bacteroidetes,47JEP@768503|Cytophagia	976|Bacteroidetes	T	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase	zraS_1	-	-	-	-	-	-	-	-	-	-	-	HATPase_c,HisKA
BYD3_k127_2187463_2	643867.Ftrac_1366	1.61e-77	263.0	COG1024@1|root,COG1024@2|Bacteria,4NI32@976|Bacteroidetes,47MCZ@768503|Cytophagia	976|Bacteroidetes	I	Belongs to the enoyl-CoA hydratase isomerase family	-	-	4.2.1.18	ko:K13766	ko00280,ko01100,map00280,map01100	M00036	R02085	RC02416	ko00000,ko00001,ko00002,ko01000	-	-	-	ECH_1
BYD3_k127_2187463_1	1237149.C900_01609	2.079e-140	471.0	COG0658@1|root,COG0658@2|Bacteria,4NEJH@976|Bacteroidetes,47K9X@768503|Cytophagia	976|Bacteroidetes	S	TIGRFAM ComEC Rec2-related protein	comEC	-	-	ko:K02238	-	M00429	-	-	ko00000,ko00002,ko02044	3.A.11.1,3.A.11.2	-	-	Competence,DUF4131
BYD3_k127_2187463_0	643867.Ftrac_1369	6.865e-142	456.0	COG1702@1|root,COG1702@2|Bacteria,4NDYV@976|Bacteroidetes,47JUG@768503|Cytophagia	976|Bacteroidetes	T	Phosphate starvation-inducible protein PhoH	phoH	-	-	ko:K06217	-	-	-	-	ko00000	-	-	-	PhoH
BYD3_k127_2187463_3	1237149.C900_02698	7.311e-55	196.0	COG1912@1|root,COG1912@2|Bacteria,4NG9Y@976|Bacteroidetes,47PDG@768503|Cytophagia	976|Bacteroidetes	S	S-adenosyl-l-methionine hydroxide adenosyltransferase	fjo14	-	-	-	-	-	-	-	-	-	-	-	SAM_adeno_trans
BYD3_k127_2220122_10	929703.KE386491_gene4207	1.004e-10	63.0	2C87P@1|root,32H7J@2|Bacteria,4NS7S@976|Bacteroidetes,47R39@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	DoxX_2
BYD3_k127_2220122_2	1122223.KB890696_gene75	1.799e-140	457.0	COG4638@1|root,COG4638@2|Bacteria	2|Bacteria	P	Rieske (2fe-2S)	-	-	1.14.15.7	ko:K00499	ko00260,map00260	-	R07409	RC00087	ko00000,ko00001,ko01000	-	-	-	Rieske,Ring_hydroxyl_A
BYD3_k127_2220122_5	929703.KE386491_gene874	8.301e-114	377.0	COG4948@1|root,COG4948@2|Bacteria,4NEBX@976|Bacteroidetes,47KCD@768503|Cytophagia	976|Bacteroidetes	M	PFAM Mandelate racemase muconate lactonizing enzyme, C-terminal domain	menC	-	-	-	-	-	-	-	-	-	-	-	MR_MLE_C
BYD3_k127_2220122_3	929703.KE386491_gene302	5.35e-138	450.0	COG0809@1|root,COG0809@2|Bacteria,4NDZ5@976|Bacteroidetes,47KMT@768503|Cytophagia	976|Bacteroidetes	J	Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)	queA	-	2.4.99.17	ko:K07568	-	-	-	-	ko00000,ko01000,ko03016	-	-	-	Queuosine_synth
BYD3_k127_2220122_0	1237149.C900_04420	3.659e-316	987.0	COG0457@1|root,COG0823@1|root,COG2885@1|root,COG0457@2|Bacteria,COG0823@2|Bacteria,COG2885@2|Bacteria,4P15I@976|Bacteroidetes,47X8A@768503|Cytophagia	976|Bacteroidetes	MU	OmpA family	-	-	-	-	-	-	-	-	-	-	-	-	OmpA,PD40
BYD3_k127_2220122_1	1237149.C900_04422	3.307e-154	500.0	28KMN@1|root,2ZA61@2|Bacteria,4NJ9P@976|Bacteroidetes,47P0N@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	DUF4062
BYD3_k127_2220122_6	926556.Echvi_1134	2.66e-77	266.0	COG0861@1|root,COG0861@2|Bacteria,4NFFD@976|Bacteroidetes,47MB3@768503|Cytophagia	976|Bacteroidetes	P	PFAM Integral membrane protein TerC	-	-	-	-	-	-	-	-	-	-	-	-	TerC
BYD3_k127_2220122_8	946077.W5A_08949	8.425e-54	194.0	COG2318@1|root,COG2318@2|Bacteria,4NNQI@976|Bacteroidetes,1I28A@117743|Flavobacteriia	976|Bacteroidetes	S	DinB superfamily	yfiT	-	-	-	-	-	-	-	-	-	-	-	DinB_2
BYD3_k127_2220122_4	1237149.C900_00609	1.429e-133	432.0	COG0429@1|root,COG0429@2|Bacteria,4NFGZ@976|Bacteroidetes,47JJP@768503|Cytophagia	976|Bacteroidetes	S	Alpha beta hydrolase	-	-	-	ko:K07019	-	-	-	-	ko00000	-	-	-	Abhydrolase_1,Hydrolase_4
BYD3_k127_2220122_7	1237149.C900_00610	5.804e-73	252.0	COG2135@1|root,COG2135@2|Bacteria,4NKPN@976|Bacteroidetes,47MR7@768503|Cytophagia	976|Bacteroidetes	S	Belongs to the SOS response-associated peptidase family	-	-	-	-	-	-	-	-	-	-	-	-	SRAP
BYD3_k127_2238868_2	1144313.PMI10_03061	4.126e-140	449.0	COG1073@1|root,COG1073@2|Bacteria,4NFJZ@976|Bacteroidetes,1HZ29@117743|Flavobacteriia,2NUH0@237|Flavobacterium	976|Bacteroidetes	S	X-Pro dipeptidyl-peptidase (S15 family)	-	-	-	ko:K06889	-	-	-	-	ko00000	-	-	-	AXE1,DLH,Peptidase_S15
BYD3_k127_2238868_4	1122931.AUAE01000001_gene757	5.007e-46	171.0	COG4925@1|root,COG4925@2|Bacteria,4NQA7@976|Bacteroidetes,2FSHV@200643|Bacteroidia,22YJP@171551|Porphyromonadaceae	976|Bacteroidetes	S	Cyclophilin-like	-	-	-	-	-	-	-	-	-	-	-	-	Cyclophil_like
BYD3_k127_2238868_3	1408473.JHXO01000005_gene1676	1.649e-76	264.0	COG1051@1|root,COG1051@2|Bacteria,4PMRX@976|Bacteroidetes	976|Bacteroidetes	F	NUDIX domain	-	-	-	-	-	-	-	-	-	-	-	-	NUDIX
BYD3_k127_2238868_1	700598.Niako_3663	7.02e-160	509.0	COG1609@1|root,COG1609@2|Bacteria,4NFB7@976|Bacteroidetes,1IRES@117747|Sphingobacteriia	976|Bacteroidetes	K	Transcriptional regulator	-	-	-	-	-	-	-	-	-	-	-	-	GntR,Peripla_BP_3
BYD3_k127_2238868_0	1123248.KB893315_gene2947	4.483e-193	616.0	COG3250@1|root,COG3250@2|Bacteria,4NFE8@976|Bacteroidetes,1IPWK@117747|Sphingobacteriia	976|Bacteroidetes	G	Glycoside hydrolase, family 2	-	-	-	-	-	-	-	-	-	-	-	-	F5_F8_type_C,Glyco_hydro_106,Glyco_hydro_2_N
BYD3_k127_224564_0	1237149.C900_03459	0.0	1100.0	COG1154@1|root,COG1154@2|Bacteria,4NDY5@976|Bacteroidetes,47JUB@768503|Cytophagia	976|Bacteroidetes	H	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)	dxs	-	2.2.1.7	ko:K01662	ko00730,ko00900,ko01100,ko01110,ko01130,map00730,map00900,map01100,map01110,map01130	M00096	R05636	RC00032	ko00000,ko00001,ko00002,ko01000	-	-	-	DXP_synthase_N,E1_dh,Transket_pyr,Transketolase_C
BYD3_k127_224564_6	1279009.ADICEAN_02590	4.468e-60	216.0	COG0596@1|root,COG0596@2|Bacteria,4PKUD@976|Bacteroidetes,47Y3M@768503|Cytophagia	976|Bacteroidetes	S	Alpha/beta hydrolase family	-	-	-	-	-	-	-	-	-	-	-	-	Abhydrolase_1,Abhydrolase_6
BYD3_k127_224564_5	1237149.C900_01781	6.018e-97	323.0	COG1512@1|root,COG1512@2|Bacteria	2|Bacteria	S	TPM domain	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_224564_9	880071.Fleli_0342	1.14e-21	100.0	2AMB7@1|root,31C6A@2|Bacteria,4NQ8I@976|Bacteroidetes,47Q46@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_224564_4	269798.CHU_0571	4.657e-98	331.0	COG3081@1|root,COG3081@2|Bacteria,4NFSN@976|Bacteroidetes,47MMD@768503|Cytophagia	976|Bacteroidetes	S	37-kD nucleoid-associated bacterial protein	-	-	-	-	-	-	-	-	-	-	-	-	NA37
BYD3_k127_224564_2	1288963.ADIS_1830	2.789e-184	586.0	COG0172@1|root,COG0172@2|Bacteria,4NED6@976|Bacteroidetes,47JAB@768503|Cytophagia	976|Bacteroidetes	J	tRNA synthetase class II core domain (G, H, P, S and T)	serS	-	6.1.1.11	ko:K01875	ko00970,map00970	M00359,M00360	R03662,R08218	RC00055,RC00523	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	-	-	-	Seryl_tRNA_N,tRNA-synt_2b
BYD3_k127_224564_1	1237149.C900_03232	1.293e-239	750.0	COG1158@1|root,COG1158@2|Bacteria,4NEFP@976|Bacteroidetes,47JWD@768503|Cytophagia	976|Bacteroidetes	K	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template	rho	-	-	ko:K03628	ko03018,map03018	-	-	-	ko00000,ko00001,ko03019,ko03021	-	-	-	ATP-synt_ab,Rho_N,Rho_RNA_bind
BYD3_k127_224564_8	1237149.C900_04583	1.063e-44	165.0	2D41J@1|root,32TG2@2|Bacteria,4NTNX@976|Bacteroidetes,47RJ7@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_224564_3	643867.Ftrac_2551	1.7e-129	423.0	COG0635@1|root,COG0635@2|Bacteria,4NFEE@976|Bacteroidetes,47JXR@768503|Cytophagia	976|Bacteroidetes	H	Involved in the biosynthesis of porphyrin-containing compound	hemN	-	-	-	-	-	-	-	-	-	-	-	HemN_C,Radical_SAM
BYD3_k127_224564_7	926556.Echvi_0625	2.017e-47	171.0	COG1587@1|root,COG1587@2|Bacteria,4NEQ3@976|Bacteroidetes,47JYP@768503|Cytophagia	976|Bacteroidetes	H	Uroporphyrinogen-III synthase	hemD	-	4.2.1.75	ko:K01719	ko00860,ko01100,ko01110,ko01120,map00860,map01100,map01110,map01120	M00121	R03165	RC01861	ko00000,ko00001,ko00002,ko01000	-	-	-	HEM4
BYD3_k127_224564_10	313606.M23134_02539	3.204e-10	60.0	COG1587@1|root,COG1587@2|Bacteria,4NEQ3@976|Bacteroidetes,47JYP@768503|Cytophagia	976|Bacteroidetes	H	Uroporphyrinogen-III synthase	hemD	-	4.2.1.75	ko:K01719	ko00860,ko01100,ko01110,ko01120,map00860,map01100,map01110,map01120	M00121	R03165	RC01861	ko00000,ko00001,ko00002,ko01000	-	-	-	HEM4
BYD3_k127_2254566_6	714943.Mucpa_4533	4.561e-09	58.0	COG0454@1|root,COG0456@2|Bacteria,4NURB@976|Bacteroidetes,1IU7H@117747|Sphingobacteriia	976|Bacteroidetes	K	DinB superfamily	-	-	-	-	-	-	-	-	-	-	-	-	DinB_2
BYD3_k127_2254566_3	1124780.ANNU01000021_gene3020	2.282e-57	203.0	COG2151@1|root,COG2151@2|Bacteria,4NMS0@976|Bacteroidetes	976|Bacteroidetes	L	Phenylacetate-CoA oxygenase	paaD	-	-	ko:K02612	ko00360,ko01120,map00360,map01120	-	R09838	RC02690	ko00000,ko00001	-	-	-	FeS_assembly_P
BYD3_k127_2254566_5	1227739.Hsw_2824	7.375e-11	70.0	2EKQA@1|root,33EE3@2|Bacteria,4NYQM@976|Bacteroidetes,47T4Z@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_2254566_1	1237149.C900_04831	1.093e-152	490.0	COG3239@1|root,COG3239@2|Bacteria,4NIC2@976|Bacteroidetes,47NVE@768503|Cytophagia	976|Bacteroidetes	I	Fatty acid desaturase	alkB	-	1.14.15.3	ko:K00496	ko00071,ko00930,map00071,map00930	-	R01347,R02281,R06945	RC00478	ko00000,ko00001,ko01000	-	-	-	FA_desaturase
BYD3_k127_2254566_2	1237149.C900_02210	1.21e-84	291.0	COG1388@1|root,COG1388@2|Bacteria,4NG96@976|Bacteroidetes,47NR5@768503|Cytophagia	976|Bacteroidetes	M	PFAM LysM domain	lysM	-	-	-	-	-	-	-	-	-	-	-	ANF_receptor,LysM,Peripla_BP_6
BYD3_k127_2254566_4	153721.MYP_4280	4.197e-36	147.0	2DJDC@1|root,32UCS@2|Bacteria,4NTR3@976|Bacteroidetes,47RMX@768503|Cytophagia	976|Bacteroidetes	S	Domain of unknown function (DUF4905)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4905
BYD3_k127_2254566_0	1237149.C900_02212	1.394e-179	572.0	COG1030@1|root,COG1030@2|Bacteria,4NGGV@976|Bacteroidetes,47MQR@768503|Cytophagia	976|Bacteroidetes	O	Membrane-bound serine protease (ClpP class)	-	-	-	ko:K07403	-	-	-	-	ko00000	-	-	-	NfeD,Peptidase_S49,SDH_sah
BYD3_k127_2272090_4	1094508.Tsac_0818	1.504e-14	86.0	COG0457@1|root,COG1396@1|root,COG0457@2|Bacteria,COG1396@2|Bacteria,1VHJ0@1239|Firmicutes,247R0@186801|Clostridia,42F3D@68295|Thermoanaerobacterales	186801|Clostridia	K	SMART helix-turn-helix	-	-	-	-	-	-	-	-	-	-	-	-	HTH_19,HTH_3,TPR_12,TPR_8
BYD3_k127_2272090_1	1237149.C900_01581	2.913e-118	385.0	COG0330@1|root,COG0330@2|Bacteria,4NFNB@976|Bacteroidetes,47MT6@768503|Cytophagia	976|Bacteroidetes	O	PFAM SPFH domain Band 7 family	-	-	-	-	-	-	-	-	-	-	-	-	Band_7
BYD3_k127_2272090_0	1121859.KB890750_gene417	1.818e-220	689.0	COG0372@1|root,COG0372@2|Bacteria,4NFXK@976|Bacteroidetes,47JIN@768503|Cytophagia	976|Bacteroidetes	C	Belongs to the citrate synthase family	gltA	-	2.3.3.1	ko:K01647	ko00020,ko00630,ko01100,ko01110,ko01120,ko01130,ko01200,ko01210,ko01230,map00020,map00630,map01100,map01110,map01120,map01130,map01200,map01210,map01230	M00009,M00010,M00012,M00740	R00351	RC00004,RC00067	br01601,ko00000,ko00001,ko00002,ko01000	-	-	-	Citrate_synt
BYD3_k127_2272090_3	1237149.C900_01579	3.684e-28	117.0	COG4281@1|root,COG4281@2|Bacteria,4NVK0@976|Bacteroidetes,47RZ1@768503|Cytophagia	976|Bacteroidetes	I	Acyl CoA binding protein	-	-	-	-	-	-	-	-	-	-	-	-	ACBP
BYD3_k127_2272090_2	1237149.C900_01578	2.193e-66	233.0	COG1385@1|root,COG1385@2|Bacteria,4NE2S@976|Bacteroidetes,47PRE@768503|Cytophagia	976|Bacteroidetes	J	Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit	rsmE	-	2.1.1.193	ko:K09761	-	-	-	-	ko00000,ko01000,ko03009	-	-	-	Methyltrans_RNA
BYD3_k127_2308558_3	1237149.C900_00393	5.443e-62	221.0	COG1595@1|root,COG1595@2|Bacteria,4NMYQ@976|Bacteroidetes,47PII@768503|Cytophagia	976|Bacteroidetes	K	TIGRFAM RNA polymerase sigma factor, sigma-70 family	-	-	-	ko:K03088	-	-	-	-	ko00000,ko03021	-	-	-	Sigma70_r2,Sigma70_r4_2
BYD3_k127_2308558_2	761193.Runsl_5528	3.065e-84	303.0	COG0642@1|root,COG2205@2|Bacteria,4NTWA@976|Bacteroidetes,47RKM@768503|Cytophagia	976|Bacteroidetes	T	His Kinase A (phosphoacceptor) domain	-	-	-	-	-	-	-	-	-	-	-	-	HATPase_c,HisKA,PAS_9,Response_reg
BYD3_k127_2308558_1	1124780.ANNU01000030_gene1122	4.038e-114	373.0	COG2273@1|root,COG2273@2|Bacteria,4NHP5@976|Bacteroidetes,47JXY@768503|Cytophagia	976|Bacteroidetes	G	Glycoside hydrolase family 16	bglA	-	3.2.1.73	ko:K01216	-	-	-	-	ko00000,ko01000	-	-	-	GDPD,Glyco_hydro_16
BYD3_k127_2308558_5	1237149.C900_01259	4.874e-18	92.0	28P8J@1|root,2ZC2G@2|Bacteria,4NTQZ@976|Bacteroidetes,47SAC@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_2308558_0	926549.KI421517_gene286	1.24e-180	586.0	COG1305@1|root,COG1305@2|Bacteria,4NEKT@976|Bacteroidetes,47NCY@768503|Cytophagia	976|Bacteroidetes	E	Domain of Unknown Function with PDB structure (DUF3857)	-	-	-	-	-	-	-	-	-	-	-	-	DUF3857,DUF3858,Transglut_core
BYD3_k127_2308558_4	1121012.AUKX01000004_gene3469	4.135e-46	169.0	COG2159@1|root,COG2159@2|Bacteria,4NG9U@976|Bacteroidetes,1HYFP@117743|Flavobacteriia,23GX1@178469|Arenibacter	976|Bacteroidetes	S	Amidohydrolase	-	-	-	-	-	-	-	-	-	-	-	-	Amidohydro_2
BYD3_k127_2311661_1	1089547.KB913013_gene2328	9.505e-126	406.0	COG3828@1|root,COG3828@2|Bacteria,4NGR8@976|Bacteroidetes,47P1J@768503|Cytophagia	976|Bacteroidetes	S	Trehalose utilisation	-	-	-	ko:K09992	-	-	-	-	ko00000	-	-	-	ThuA
BYD3_k127_2311661_3	762903.Pedsa_0102	1.972e-28	117.0	2EUGE@1|root,33MYP@2|Bacteria,4NZG4@976|Bacteroidetes,1IYPX@117747|Sphingobacteriia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_2311661_2	1144313.PMI10_02213	1.875e-45	171.0	2CMS6@1|root,32SFE@2|Bacteria,4NWI0@976|Bacteroidetes,1IAQW@117743|Flavobacteriia,2NWVT@237|Flavobacterium	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	DinB_2
BYD3_k127_2311661_0	926549.KI421517_gene2859	5.059e-137	444.0	COG0327@1|root,COG0327@2|Bacteria,4NFJ3@976|Bacteroidetes,47NXF@768503|Cytophagia	976|Bacteroidetes	S	NIF3 (NGG1p interacting factor 3)	-	-	-	-	-	-	-	-	-	-	-	-	NIF3
BYD3_k127_2311661_4	926549.KI421517_gene4043	7.216e-13	68.0	COG0412@1|root,COG0412@2|Bacteria,4NEUX@976|Bacteroidetes,47JGG@768503|Cytophagia	976|Bacteroidetes	Q	dienelactone hydrolase	-	-	3.1.1.45	ko:K01061	ko00361,ko00364,ko00623,ko01100,ko01110,ko01120,ko01130,map00361,map00364,map00623,map01100,map01110,map01120,map01130	-	R03893,R05510,R05511,R06835,R06838,R08120,R08121,R09136,R09220,R09222	RC01018,RC01906,RC01907,RC02441,RC02467,RC02468,RC02674,RC02675,RC02686	ko00000,ko00001,ko01000	-	-	-	DLH
BYD3_k127_2321134_5	1124780.ANNU01000025_gene3374	1.742e-106	347.0	COG1398@1|root,COG1398@2|Bacteria,4NE0I@976|Bacteroidetes,47KJ0@768503|Cytophagia	976|Bacteroidetes	I	fatty acid desaturase	-	-	1.14.19.1	ko:K00507	ko01040,ko01212,ko03320,ko04152,ko04212,map01040,map01212,map03320,map04152,map04212	-	R02222	RC00917	ko00000,ko00001,ko01000,ko01004	-	-	-	FA_desaturase
BYD3_k127_2321134_8	1237149.C900_01856	9.202e-61	217.0	COG1595@1|root,COG1595@2|Bacteria,4P4V9@976|Bacteroidetes,47XV7@768503|Cytophagia	976|Bacteroidetes	K	Sigma-70 region 2	-	-	-	-	-	-	-	-	-	-	-	-	Sigma70_r2,Sigma70_r4_2
BYD3_k127_2321134_3	1237149.C900_04556	4.241e-165	523.0	COG1398@1|root,COG1398@2|Bacteria,4NJI9@976|Bacteroidetes,47XKP@768503|Cytophagia	976|Bacteroidetes	I	Fatty acid desaturase	-	-	1.14.19.1	ko:K00507	ko01040,ko01212,ko03320,ko04152,ko04212,map01040,map01212,map03320,map04152,map04212	-	R02222	RC00917	ko00000,ko00001,ko01000,ko01004	-	-	-	FA_desaturase
BYD3_k127_2321134_2	761193.Runsl_5035	3.278e-178	566.0	COG0513@1|root,COG0513@2|Bacteria,4NEVI@976|Bacteroidetes,47M80@768503|Cytophagia	976|Bacteroidetes	L	Belongs to the DEAD box helicase family	deaD	-	-	-	-	-	-	-	-	-	-	-	DEAD,Helicase_C
BYD3_k127_2321134_0	1237149.C900_04554	0.0	1260.0	COG0249@1|root,COG0249@2|Bacteria,4NEGB@976|Bacteroidetes,47JE2@768503|Cytophagia	976|Bacteroidetes	L	that it carries out the mismatch recognition step. This protein has a weak ATPase activity	mutS	GO:0003674,GO:0003676,GO:0003677,GO:0003684,GO:0003690,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008094,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0030983,GO:0032300,GO:0032991,GO:0033554,GO:0034641,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1990391	-	ko:K03555	ko03430,map03430	-	-	-	ko00000,ko00001,ko03400	-	-	-	MutS_I,MutS_II,MutS_III,MutS_IV,MutS_V
BYD3_k127_2321134_9	1296416.JACB01000003_gene895	1.682e-49	184.0	COG4798@1|root,COG4798@2|Bacteria,4NII9@976|Bacteroidetes,1IJX2@117743|Flavobacteriia,2YJ3P@290174|Aquimarina	976|Bacteroidetes	S	Fibrillarin	-	-	-	-	-	-	-	-	-	-	-	-	Methyltransf_12,Methyltransf_25,Methyltransf_31
BYD3_k127_2321134_7	509635.N824_23850	1.501e-64	225.0	COG0566@1|root,COG0566@2|Bacteria,4NM8C@976|Bacteroidetes,1IS2Z@117747|Sphingobacteriia	976|Bacteroidetes	J	SpoU rRNA Methylase family	spoU	-	-	-	-	-	-	-	-	-	-	-	SpoU_methylase
BYD3_k127_2321134_1	643867.Ftrac_2021	5.474e-193	607.0	COG0150@1|root,COG0150@2|Bacteria,4NE4E@976|Bacteroidetes,47JG0@768503|Cytophagia	976|Bacteroidetes	F	PFAM AIR synthase related protein	purM	-	6.3.3.1	ko:K01933	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	M00048	R04208	RC01100	ko00000,ko00001,ko00002,ko01000	-	-	-	AIRS,AIRS_C
BYD3_k127_2321134_4	562970.Btus_3274	6.472e-128	420.0	COG1960@1|root,COG1960@2|Bacteria,1TP57@1239|Firmicutes,4HAKV@91061|Bacilli,277WW@186823|Alicyclobacillaceae	91061|Bacilli	I	Acyl-CoA dehydrogenase, N-terminal domain	acdA	-	1.3.8.1,1.3.8.7	ko:K00248,ko:K00249	ko00071,ko00280,ko00410,ko00640,ko00650,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,ko03320,map00071,map00280,map00410,map00640,map00650,map01100,map01110,map01120,map01130,map01200,map01212,map03320	M00013,M00036,M00087	R00924,R01175,R01178,R01279,R02661,R03172,R03777,R03857,R03990,R04095,R04432,R04751,R04754	RC00052,RC00068,RC00076,RC00095,RC00120,RC00148,RC00246	ko00000,ko00001,ko00002,ko01000	-	-	-	Acyl-CoA_dh_1,Acyl-CoA_dh_M,Acyl-CoA_dh_N
BYD3_k127_2321134_6	1237149.C900_04461	2.581e-89	299.0	COG2738@1|root,COG2738@2|Bacteria,4NDWG@976|Bacteroidetes,47MH4@768503|Cytophagia	976|Bacteroidetes	S	PFAM Peptidase, membrane zinc metallopeptidase	-	-	-	ko:K06973	-	-	-	-	ko00000	-	-	-	Zn_peptidase_2
BYD3_k127_2330312_5	1120951.AUBG01000016_gene3567	5.267e-11	73.0	COG0457@1|root,COG2972@1|root,COG0457@2|Bacteria,COG2972@2|Bacteria,4NF45@976|Bacteroidetes,1HXAW@117743|Flavobacteriia	976|Bacteroidetes	T	PFAM Signal transduction histidine kinase, internal region	-	-	-	-	-	-	-	-	-	-	-	-	7TMR-DISM_7TM,His_kinase,TPR_12,TPR_7,TPR_8
BYD3_k127_2330312_0	1237149.C900_03684	4.235e-165	526.0	COG1005@1|root,COG1005@2|Bacteria,4NGK7@976|Bacteroidetes,47JF2@768503|Cytophagia	976|Bacteroidetes	C	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone	nuoH	-	1.6.5.3	ko:K00337	ko00190,ko01100,map00190,map01100	M00144	R11945	RC00061	ko00000,ko00001,ko00002,ko01000	3.D.1	-	-	NADHdh
BYD3_k127_2330312_2	1237149.C900_03683	1.619e-118	386.0	COG0796@1|root,COG0796@2|Bacteria,4NG1C@976|Bacteroidetes,47MMI@768503|Cytophagia	976|Bacteroidetes	M	Provides the (R)-glutamate required for cell wall biosynthesis	murI	-	5.1.1.3	ko:K01776	ko00471,ko01100,map00471,map01100	-	R00260	RC00302	ko00000,ko00001,ko01000,ko01011	-	-	-	Asp_Glu_race
BYD3_k127_2330312_3	1124780.ANNU01000010_gene3645	3.479e-58	210.0	COG1512@1|root,COG1512@2|Bacteria	2|Bacteria	S	TPM domain	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_2330312_1	1124780.ANNU01000037_gene144	2.535e-142	454.0	COG0623@1|root,COG0623@2|Bacteria,4NEVE@976|Bacteroidetes,47KZ9@768503|Cytophagia	976|Bacteroidetes	I	Enoyl- acyl-carrier-protein reductase NADH	fabI	-	1.3.1.10,1.3.1.9	ko:K00208	ko00061,ko00333,ko00780,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01100,map01130,map01212	M00083,M00572	R01404,R04429,R04430,R04724,R04725,R04955,R04956,R04958,R04959,R04961,R04962,R04966,R04967,R04969,R04970,R07765,R10118,R10122,R11671	RC00052,RC00076,RC00120	ko00000,ko00001,ko00002,ko01000,ko01004	-	-	-	adh_short_C2
BYD3_k127_2330312_4	1123277.KB893184_gene4250	4.041e-53	190.0	COG1947@1|root,COG1947@2|Bacteria,4NGFC@976|Bacteroidetes,47JG4@768503|Cytophagia	976|Bacteroidetes	I	Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol	ispE	GO:0003674,GO:0003824,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0044237,GO:0050515	2.7.1.148	ko:K00919	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	M00096	R05634	RC00002,RC01439	ko00000,ko00001,ko00002,ko01000	-	-	-	GHMP_kinases_C,GHMP_kinases_N
BYD3_k127_2359431_10	1278307.KB907037_gene647	1.648e-29	123.0	2E649@1|root,330T6@2|Bacteria,1P1EZ@1224|Proteobacteria,1SST2@1236|Gammaproteobacteria	1236|Gammaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_2359431_8	1280692.AUJL01000019_gene899	1.74e-54	209.0	COG2244@1|root,COG2244@2|Bacteria,1TPSH@1239|Firmicutes,2492X@186801|Clostridia,36FXH@31979|Clostridiaceae	186801|Clostridia	S	Polysaccharide biosynthesis protein	-	-	-	ko:K03328	-	-	-	-	ko00000	2.A.66.2	-	-	Polysacc_synt_3,Polysacc_synt_C
BYD3_k127_2359431_9	1123376.AUIU01000016_gene243	6.179e-54	199.0	COG1216@1|root,COG1216@2|Bacteria	2|Bacteria	V	Glycosyl transferase, family 2	-	-	-	-	-	-	-	-	-	-	-	-	Glycos_transf_2
BYD3_k127_2359431_7	504472.Slin_4930	2.238e-57	210.0	COG1216@1|root,COG1216@2|Bacteria,4PC2P@976|Bacteroidetes,47WQF@768503|Cytophagia	976|Bacteroidetes	S	Glycosyl transferase family 2	-	-	-	ko:K12990	ko02024,ko02025,map02024,map02025	-	-	-	ko00000,ko00001,ko01000,ko01003,ko01005	-	GT2	-	Glycos_transf_2
BYD3_k127_2359431_5	1166018.FAES_4967	1.281e-77	274.0	2BIRY@1|root,32CZI@2|Bacteria,4PQ2J@976|Bacteroidetes	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_2359431_4	1565314.OA34_08165	6.296e-82	279.0	COG1215@1|root,COG1215@2|Bacteria,1QVA8@1224|Proteobacteria,43BPF@68525|delta/epsilon subdivisions	1224|Proteobacteria	M	Glycosyltransferase like family 2	-	-	-	-	-	-	-	-	-	-	-	-	Glycos_transf_2
BYD3_k127_2359431_12	1443665.JACA01000012_gene1343	1.591e-22	111.0	COG3307@1|root,COG3307@2|Bacteria,4NUP9@976|Bacteroidetes,1I5N6@117743|Flavobacteriia,2YH0B@290174|Aquimarina	976|Bacteroidetes	M	O-Antigen ligase	-	-	-	-	-	-	-	-	-	-	-	-	Wzy_C
BYD3_k127_2359431_6	861299.J421_2491	1.673e-73	258.0	COG0451@1|root,COG0451@2|Bacteria	2|Bacteria	GM	ADP-glyceromanno-heptose 6-epimerase activity	gne	GO:0000271,GO:0003674,GO:0003824,GO:0005575,GO:0005975,GO:0005976,GO:0006629,GO:0008150,GO:0008152,GO:0008610,GO:0008653,GO:0009058,GO:0009059,GO:0009103,GO:0009987,GO:0016020,GO:0016051,GO:0016853,GO:0016854,GO:0016857,GO:0033692,GO:0034637,GO:0034645,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044262,GO:0044264,GO:0071704,GO:1901135,GO:1901137,GO:1901576,GO:1903509	5.1.3.26	ko:K19997	-	-	-	-	ko00000,ko01000	-	-	-	Epimerase
BYD3_k127_2359431_2	1237149.C900_03113	1.372e-124	407.0	COG0472@1|root,COG0472@2|Bacteria,4NGKM@976|Bacteroidetes,47M4P@768503|Cytophagia	976|Bacteroidetes	M	PFAM Glycosyl transferase family 4	-	-	-	-	-	-	-	-	-	-	-	-	Glycos_transf_4
BYD3_k127_2359431_1	643867.Ftrac_2390	1.618e-147	473.0	COG0016@1|root,COG0016@2|Bacteria,4NF8I@976|Bacteroidetes,47JM1@768503|Cytophagia	976|Bacteroidetes	J	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily	pheS	GO:0003674,GO:0003824,GO:0004812,GO:0004826,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006432,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576	6.1.1.20	ko:K01889	ko00970,map00970	M00359,M00360	R03660	RC00055,RC00523	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	-	-	-	Phe_tRNA-synt_N,tRNA-synt_2d
BYD3_k127_2359431_3	1237149.C900_03120	1.797e-97	326.0	COG1250@1|root,COG1250@2|Bacteria,4NF2W@976|Bacteroidetes,47XHJ@768503|Cytophagia	976|Bacteroidetes	I	3-hydroxyacyl-CoA dehydrogenase, C-terminal domain	paaH	-	1.1.1.157	ko:K00074	ko00360,ko00362,ko00650,ko01100,ko01120,map00360,map00362,map00650,map01100,map01120	-	R01976,R05576,R06941	RC00029,RC00117	ko00000,ko00001,ko01000	-	-	-	3HCDH,3HCDH_N
BYD3_k127_2359431_11	1356852.N008_09850	1.174e-24	110.0	COG2146@1|root,COG2146@2|Bacteria,4NV1B@976|Bacteroidetes,47S5J@768503|Cytophagia	976|Bacteroidetes	P	nitrite reductase [NAD(P)H] activity	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_2359431_0	926556.Echvi_3727	6.775e-285	892.0	COG2352@1|root,COG2352@2|Bacteria,4NFC0@976|Bacteroidetes,47NF0@768503|Cytophagia	976|Bacteroidetes	C	Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle	ppc	-	4.1.1.31	ko:K01595	ko00620,ko00680,ko00710,ko00720,ko01100,ko01120,ko01200,map00620,map00680,map00710,map00720,map01100,map01120,map01200	M00168,M00170,M00171,M00172,M00173,M00346,M00374	R00345	RC02741	ko00000,ko00001,ko00002,ko01000	-	-	-	PEPcase
BYD3_k127_2359683_19	555500.I215_03980	1.244e-15	80.0	COG0318@1|root,COG0318@2|Bacteria,4NEXK@976|Bacteroidetes,1HX5P@117743|Flavobacteriia	976|Bacteroidetes	IQ	O-succinylbenzoic acid--CoA ligase	menE	-	6.2.1.26	ko:K01911	ko00130,ko01100,ko01110,map00130,map01100,map01110	M00116	R04030	RC00004,RC00014	ko00000,ko00001,ko00002,ko01000	-	-	-	AMP-binding,AMP-binding_C
BYD3_k127_2359683_17	926562.Oweho_3381	1.597e-26	113.0	COG0745@1|root,COG0745@2|Bacteria,4NSD3@976|Bacteroidetes,1I48M@117743|Flavobacteriia	976|Bacteroidetes	KT	Response regulator receiver domain	-	-	-	-	-	-	-	-	-	-	-	-	Response_reg
BYD3_k127_2359683_15	1237149.C900_02524	7.047e-43	166.0	COG1538@1|root,COG1538@2|Bacteria,4NY7T@976|Bacteroidetes,47SZ0@768503|Cytophagia	976|Bacteroidetes	MU	Outer membrane efflux protein	-	-	-	-	-	-	-	-	-	-	-	-	OEP
BYD3_k127_2359683_14	1124780.ANNU01000020_gene3311	1.096e-54	196.0	COG0454@1|root,COG0456@2|Bacteria,4NQVT@976|Bacteroidetes,47QAW@768503|Cytophagia	976|Bacteroidetes	K	PFAM GCN5-related N-acetyltransferase	paiA	-	-	-	-	-	-	-	-	-	-	-	Acetyltransf_1,Acetyltransf_10
BYD3_k127_2359683_6	1237149.C900_01205	6.186e-118	387.0	COG2304@1|root,COG2304@2|Bacteria,4NF7Y@976|Bacteroidetes,47NJQ@768503|Cytophagia	976|Bacteroidetes	S	PFAM von Willebrand factor type A	batB	-	-	ko:K07114	-	-	-	-	ko00000,ko02000	1.A.13.2.2,1.A.13.2.3	-	-	BatA,VWA,VWA_2
BYD3_k127_2359683_18	926556.Echvi_3703	6.522e-26	115.0	COG0457@1|root,COG0457@2|Bacteria,4NYDQ@976|Bacteroidetes	976|Bacteroidetes	S	Tetratricopeptide repeat	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_2359683_22	1120965.AUBV01000010_gene2897	1.277e-06	58.0	2E5Q4@1|root,330ER@2|Bacteria,4NUT9@976|Bacteroidetes,47VRA@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_2359683_20	1237149.C900_01204	2.393e-11	72.0	COG4700@1|root,COG4700@2|Bacteria,4PPNH@976|Bacteroidetes,47YQ2@768503|Cytophagia	976|Bacteroidetes	T	PFAM Protein kinase domain	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_2359683_2	1237149.C900_01203	1.258e-185	587.0	COG0183@1|root,COG0183@2|Bacteria,4NE3Q@976|Bacteroidetes,47JS8@768503|Cytophagia	976|Bacteroidetes	I	Belongs to the thiolase family	-	-	2.3.1.9	ko:K00626	ko00071,ko00072,ko00280,ko00310,ko00362,ko00380,ko00620,ko00630,ko00640,ko00650,ko00720,ko00900,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,ko02020,map00071,map00072,map00280,map00310,map00362,map00380,map00620,map00630,map00640,map00650,map00720,map00900,map01100,map01110,map01120,map01130,map01200,map01212,map02020	M00088,M00095,M00373,M00374,M00375	R00238,R01177	RC00004,RC00326	ko00000,ko00001,ko00002,ko01000,ko04147	-	-	-	Thiolase_C,Thiolase_N
BYD3_k127_2359683_8	1237149.C900_01202	7.472e-106	359.0	COG2849@1|root,COG2849@2|Bacteria,4NMDX@976|Bacteroidetes,47PSU@768503|Cytophagia	976|Bacteroidetes	S	PFAM MORN repeat variant	-	-	-	-	-	-	-	-	-	-	-	-	MORN_2
BYD3_k127_2359683_4	1121373.KB903654_gene1596	1.039e-142	459.0	COG0152@1|root,COG0152@2|Bacteria,4NF1Z@976|Bacteroidetes,47JZR@768503|Cytophagia	976|Bacteroidetes	F	PFAM SAICAR synthetase	purC	GO:0003674,GO:0003824,GO:0004639,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006163,GO:0006164,GO:0006188,GO:0006189,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0016881,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046040,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576	6.3.2.6	ko:K01923	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	M00048	R04591	RC00064,RC00162	ko00000,ko00001,ko00002,ko01000	-	-	-	SAICAR_synt
BYD3_k127_2359683_13	1237149.C900_04768	2.391e-58	205.0	COG1366@1|root,COG1366@2|Bacteria,4NTPB@976|Bacteroidetes,47R1F@768503|Cytophagia	976|Bacteroidetes	T	Belongs to the anti-sigma-factor antagonist family	-	-	-	-	-	-	-	-	-	-	-	-	STAS,STAS_2
BYD3_k127_2359683_7	1237149.C900_04769	6.313e-117	383.0	COG1234@1|root,COG1234@2|Bacteria,4NE1K@976|Bacteroidetes,47KGX@768503|Cytophagia	976|Bacteroidetes	S	Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA	rnz	GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004540,GO:0006139,GO:0006396,GO:0006399,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0031123,GO:0034414,GO:0034470,GO:0034641,GO:0034660,GO:0042779,GO:0042780,GO:0042781,GO:0043170,GO:0043628,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0140098,GO:1901360,GO:1905267	3.1.26.11	ko:K00784	ko03013,map03013	-	-	-	ko00000,ko00001,ko01000,ko03016	-	-	-	Lactamase_B_2
BYD3_k127_2359683_10	926556.Echvi_3710	1.477e-95	323.0	COG1738@1|root,COG1738@2|Bacteria,4NFP3@976|Bacteroidetes,47J8X@768503|Cytophagia	976|Bacteroidetes	S	Involved in the import of queuosine (Q) precursors, required for Q precursor salvage	-	-	-	ko:K09125	-	-	-	-	ko00000	-	-	-	Vut_1
BYD3_k127_2359683_11	1237149.C900_03345	2.125e-80	274.0	COG0566@1|root,COG0566@2|Bacteria,4NG1U@976|Bacteroidetes,47NSP@768503|Cytophagia	976|Bacteroidetes	J	PFAM SpoU rRNA Methylase family	aviRb	-	-	ko:K03437	-	-	-	-	ko00000,ko03016	-	-	-	SpoU_methylase,SpoU_sub_bind
BYD3_k127_2359683_3	1237149.C900_03344	1.362e-149	487.0	COG4775@1|root,COG4775@2|Bacteria,4NE80@976|Bacteroidetes,47K6V@768503|Cytophagia	976|Bacteroidetes	M	Outer membrane protein protective antigen OMA87	-	-	-	-	-	-	-	-	-	-	-	-	Bac_surface_Ag,POTRA
BYD3_k127_2359683_9	1237149.C900_03344	2.296e-101	340.0	COG4775@1|root,COG4775@2|Bacteria,4NE80@976|Bacteroidetes,47K6V@768503|Cytophagia	976|Bacteroidetes	M	Outer membrane protein protective antigen OMA87	-	-	-	-	-	-	-	-	-	-	-	-	Bac_surface_Ag,POTRA
BYD3_k127_2359683_0	1237149.C900_03343	0.0	1055.0	COG0022@1|root,COG1071@1|root,COG0022@2|Bacteria,COG1071@2|Bacteria,4NE71@976|Bacteroidetes,47JUS@768503|Cytophagia	976|Bacteroidetes	C	Transketolase, pyrimidine binding domain	bfmBAB	-	1.2.4.4	ko:K11381	ko00280,ko00640,ko01100,ko01110,ko01130,map00280,map00640,map01100,map01110,map01130	M00036	R07599,R07600,R07601,R07602,R07603,R07604,R10996,R10997	RC00027,RC00627,RC02743,RC02883,RC02949,RC02953	br01601,ko00000,ko00001,ko00002,ko01000	-	-	-	E1_dh,Transket_pyr,Transketolase_C
BYD3_k127_2359683_1	929562.Emtol_3518	9.29e-307	962.0	COG2866@1|root,COG2866@2|Bacteria,4NEJA@976|Bacteroidetes,47MZ7@768503|Cytophagia	976|Bacteroidetes	E	Zinc carboxypeptidase	-	-	-	-	-	-	-	-	-	-	-	-	Peptidase_M14
BYD3_k127_2359683_5	1121904.ARBP01000004_gene1106	3.69e-137	442.0	COG0408@1|root,COG0408@2|Bacteria,4NFZS@976|Bacteroidetes,47M0F@768503|Cytophagia	976|Bacteroidetes	H	PFAM coproporphyrinogen III oxidase	hemF	-	1.3.3.3	ko:K00228	ko00860,ko01100,ko01110,map00860,map01100,map01110	M00121	R03220	RC00884	ko00000,ko00001,ko00002,ko01000	-	-	-	Coprogen_oxidas
BYD3_k127_2359683_12	1279009.ADICEAN_02240	3.057e-65	243.0	COG4251@1|root,COG4251@2|Bacteria,4NFC3@976|Bacteroidetes,47JSC@768503|Cytophagia	976|Bacteroidetes	T	His Kinase A (phosphoacceptor) domain	-	-	-	-	-	-	-	-	-	-	-	-	GAF,GAF_2,HATPase_c,HisKA,PAS,PAS_3,PAS_4,PAS_9,Response_reg
BYD3_k127_2359683_16	1124780.ANNU01000025_gene3355	2.372e-39	149.0	COG1393@1|root,COG1393@2|Bacteria,4NSJ5@976|Bacteroidetes,47R1A@768503|Cytophagia	976|Bacteroidetes	P	Belongs to the ArsC family	-	-	-	-	-	-	-	-	-	-	-	-	ArsC
BYD3_k127_2359683_21	1121957.ATVL01000007_gene2313	9.561e-08	53.0	COG2876@1|root,COG2876@2|Bacteria,4NH82@976|Bacteroidetes,47KY7@768503|Cytophagia	976|Bacteroidetes	E	PFAM DAHP synthetase I family	-	-	2.5.1.54	ko:K03856	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	M00022	R01826	RC00435	ko00000,ko00001,ko00002,ko01000	-	-	-	DAHP_synth_1
BYD3_k127_2376590_0	216432.CA2559_02110	2.245e-157	506.0	COG0659@1|root,COG0659@2|Bacteria,4NE9G@976|Bacteroidetes,1HYXB@117743|Flavobacteriia	976|Bacteroidetes	P	COG0659 Sulfate permease and related	-	-	-	ko:K03321	-	-	-	-	ko00000,ko02000	2.A.53.3	-	-	Sulfate_transp
BYD3_k127_2376590_1	1237149.C900_03884	4.625e-79	281.0	COG0642@1|root,COG2205@2|Bacteria,4NEIS@976|Bacteroidetes,47MHI@768503|Cytophagia	976|Bacteroidetes	T	histidine kinase HAMP region domain protein	-	-	-	-	-	-	-	-	-	-	-	-	HAMP,HATPase_c,HisKA
BYD3_k127_2376590_2	1121007.AUML01000016_gene263	3.171e-74	256.0	COG0745@1|root,COG0745@2|Bacteria,4NG7D@976|Bacteroidetes,1HWZ6@117743|Flavobacteriia,2YHI9@290174|Aquimarina	976|Bacteroidetes	T	Transcriptional regulatory protein, C terminal	-	-	-	-	-	-	-	-	-	-	-	-	Response_reg,Trans_reg_C
BYD3_k127_2376590_3	926549.KI421517_gene2120	1.716e-41	160.0	COG2068@1|root,COG2068@2|Bacteria,4NQNF@976|Bacteroidetes,47PUQ@768503|Cytophagia	976|Bacteroidetes	S	MobA-like NTP transferase domain	-	-	2.7.7.76	ko:K07141	ko00790,map00790	-	R11582	-	ko00000,ko00001,ko01000	-	-	-	NTP_transf_3
BYD3_k127_2376590_4	1178825.ALIH01000002_gene1043	2.657e-20	95.0	COG4319@1|root,COG4319@2|Bacteria,4NW4P@976|Bacteroidetes,1I651@117743|Flavobacteriia	976|Bacteroidetes	S	ketosteroid isomerase	-	-	-	-	-	-	-	-	-	-	-	-	DUF4440
BYD3_k127_2413607_5	1270196.JCKI01000005_gene3101	9.3e-70	239.0	COG1554@1|root,COG1554@2|Bacteria,4NFG1@976|Bacteroidetes,1IRII@117747|Sphingobacteriia	976|Bacteroidetes	G	phosphorylase	-	-	2.4.1.8	ko:K00691	ko00500,ko01100,map00500,map01100	-	R01555	RC00049	ko00000,ko00001,ko01000	-	GH65	-	Glyco_hydro_65C,Glyco_hydro_65N,Glyco_hydro_65m
BYD3_k127_2413607_4	1321778.HMPREF1982_00965	4.056e-74	256.0	COG0637@1|root,COG0637@2|Bacteria,1UZE0@1239|Firmicutes,24DWR@186801|Clostridia	186801|Clostridia	S	Haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED	pgmB	-	5.4.2.6	ko:K01838	ko00500,map00500	-	R02728,R11310	RC00408	ko00000,ko00001,ko01000	-	-	-	HAD_2
BYD3_k127_2413607_3	313596.RB2501_14094	2e-118	389.0	COG0524@1|root,COG0524@2|Bacteria,4NJIK@976|Bacteroidetes,1I00V@117743|Flavobacteriia	976|Bacteroidetes	G	pfkB family carbohydrate kinase	-	-	2.7.1.20	ko:K00856	ko00230,ko01100,map00230,map01100	-	R00185	RC00002,RC00017	ko00000,ko00001,ko01000	-	-	-	PfkB
BYD3_k127_2413607_2	700598.Niako_6353	1.091e-122	400.0	COG1940@1|root,COG1940@2|Bacteria,4NGC1@976|Bacteroidetes,1IURS@117747|Sphingobacteriia	976|Bacteroidetes	GK	COGs COG1940 Transcriptional regulator sugar kinase	-	-	-	-	-	-	-	-	-	-	-	-	ROK
BYD3_k127_2413607_1	1250006.JHZZ01000001_gene1230	5.649e-194	619.0	COG0578@1|root,COG0578@2|Bacteria,4PKIZ@976|Bacteroidetes,1IJMF@117743|Flavobacteriia,3VW3V@52959|Polaribacter	976|Bacteroidetes	C	C-terminal domain of alpha-glycerophosphate oxidase	glpD	-	1.1.5.3	ko:K00111	ko00564,ko01110,map00564,map01110	-	R00848	RC00029	ko00000,ko00001,ko01000	-	-	-	DAO,DAO_C
BYD3_k127_2413607_0	313606.M23134_08118	4.945e-232	726.0	COG0554@1|root,COG0554@2|Bacteria,4NFUH@976|Bacteroidetes,47KFD@768503|Cytophagia	976|Bacteroidetes	C	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate	glpK	-	2.7.1.30	ko:K00864	ko00561,ko01100,ko03320,ko04626,map00561,map01100,map03320,map04626	-	R00847	RC00002,RC00017	ko00000,ko00001,ko01000,ko04147	-	-	-	DAO,DAO_C,FGGY_C,FGGY_N
BYD3_k127_2414950_2	1313301.AUGC01000003_gene2064	2.385e-57	208.0	COG0457@1|root,COG4995@1|root,COG0457@2|Bacteria,COG4995@2|Bacteria,4NKPZ@976|Bacteroidetes	976|Bacteroidetes	S	Tetratricopeptide TPR_1 repeat-containing protein	-	-	-	-	-	-	-	-	-	-	-	-	CHAT,TPR_10,TPR_12,TPR_7,TPR_8
BYD3_k127_2414950_0	153721.MYP_1628	1.406e-109	384.0	COG0457@1|root,COG0823@1|root,COG1388@1|root,COG2885@1|root,COG0457@2|Bacteria,COG0823@2|Bacteria,COG1388@2|Bacteria,COG2885@2|Bacteria,4NMY7@976|Bacteroidetes,47TZF@768503|Cytophagia	976|Bacteroidetes	M	Lysin motif	-	-	-	-	-	-	-	-	-	-	-	-	CarboxypepD_reg,LysM,OmpA,PD40
BYD3_k127_2414950_4	929556.Solca_2856	1.415e-43	164.0	2CIK8@1|root,32WX2@2|Bacteria,4NT0Z@976|Bacteroidetes	976|Bacteroidetes	-	-	-	-	-	ko:K09802	-	-	-	-	ko00000	-	-	-	-
BYD3_k127_2414950_3	153721.MYP_1627	1.416e-55	207.0	COG0460@1|root,COG0460@2|Bacteria	2|Bacteria	E	homoserine dehydrogenase activity	hom	-	1.1.1.3	ko:K00003	ko00260,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00260,map00270,map00300,map01100,map01110,map01120,map01130,map01230	M00017,M00018	R01773,R01775	RC00087	ko00000,ko00001,ko00002,ko01000	-	-	iSB619.SA_RS06610	ACT,Homoserine_dh,NAD_binding_3
BYD3_k127_2414950_5	1237149.C900_01086	4.374e-12	78.0	COG3266@1|root,COG3291@1|root,COG3266@2|Bacteria,COG3291@2|Bacteria,4NUXN@976|Bacteroidetes,47S6U@768503|Cytophagia	976|Bacteroidetes	S	C-terminal domain of CHU protein family	-	-	-	-	-	-	-	-	-	-	-	-	CHU_C,PKD
BYD3_k127_2414950_9	694427.Palpr_1971	0.0004025	52.0	COG1361@1|root,COG4254@1|root,COG4935@1|root,COG1361@2|Bacteria,COG4254@2|Bacteria,COG4935@2|Bacteria,4NIPH@976|Bacteroidetes,2FXXA@200643|Bacteroidia	976|Bacteroidetes	MO	C-terminal domain of CHU protein family	-	-	-	-	-	-	-	-	-	-	-	-	CHU_C
BYD3_k127_2414950_8	1353529.M899_2374	0.0001151	55.0	COG2911@1|root,COG3210@1|root,COG2911@2|Bacteria,COG3210@2|Bacteria,1N928@1224|Proteobacteria	1224|Proteobacteria	M	Chaperone of endosialidase	-	-	-	-	-	-	-	-	-	-	-	-	Peptidase_S74
BYD3_k127_2414950_6	1249997.JHZW01000003_gene3734	2.342e-06	60.0	COG1511@1|root,COG3210@1|root,COG1511@2|Bacteria,COG3210@2|Bacteria,4PKI0@976|Bacteroidetes,1IKUE@117743|Flavobacteriia,2PI31@252356|Maribacter	976|Bacteroidetes	U	PFAM Collagen triple helix repeat (20 copies)	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_2414950_7	1202532.FF52_05325	3.785e-05	56.0	COG5295@1|root,COG5295@2|Bacteria,4NE4G@976|Bacteroidetes,1HY8R@117743|Flavobacteriia,2NUIA@237|Flavobacterium	976|Bacteroidetes	UW	Hep Hag repeat protein	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_2414950_1	925409.KI911562_gene684	1.947e-79	269.0	COG1181@1|root,COG2940@1|root,COG1181@2|Bacteria,COG2940@2|Bacteria,4P8F6@976|Bacteroidetes	2|Bacteria	M	Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain	-	-	6.3.2.4	ko:K01921	ko00473,ko00550,ko01100,ko01502,map00473,map00550,map01100,map01502	-	R01150	RC00064,RC00141	ko00000,ko00001,ko01000,ko01011	-	-	-	Ank,Dala_Dala_lig_C,Dala_Dala_lig_N,SET
BYD3_k127_242381_0	1124780.ANNU01000020_gene3297	1.427e-137	453.0	COG2091@1|root,COG2091@2|Bacteria,4NFQ6@976|Bacteroidetes,47NT4@768503|Cytophagia	976|Bacteroidetes	H	lysine biosynthetic process via aminoadipic acid	-	-	-	-	-	-	-	-	-	-	-	-	CBM9_1
BYD3_k127_242381_2	760192.Halhy_0654	5.672e-58	207.0	COG2010@1|root,COG2010@2|Bacteria,4NQXA@976|Bacteroidetes,1IT61@117747|Sphingobacteriia	976|Bacteroidetes	C	PFAM Cytochrome c	-	-	-	-	-	-	-	-	-	-	-	-	Cytochrom_C
BYD3_k127_242381_3	172045.KS04_04065	2.42e-28	127.0	COG2207@1|root,COG2207@2|Bacteria,4NEEQ@976|Bacteroidetes,1HWW5@117743|Flavobacteriia,34QFB@308865|Elizabethkingia	976|Bacteroidetes	K	helix_turn_helix, arabinose operon control protein	pchR	-	-	-	-	-	-	-	-	-	-	-	HTH_18
BYD3_k127_242381_1	926562.Oweho_2993	5.857e-97	325.0	COG3012@1|root,COG3228@1|root,COG3012@2|Bacteria,COG3228@2|Bacteria,4NGM9@976|Bacteroidetes,1HYPW@117743|Flavobacteriia,2PAS4@246874|Cryomorphaceae	976|Bacteroidetes	S	Glucose-regulated metallo-peptidase M90	-	-	-	ko:K09933	-	-	-	-	ko00000,ko01002	-	-	-	Peptidase_M90,SEC-C
BYD3_k127_2425118_3	1121904.ARBP01000004_gene1111	1.687e-75	261.0	COG0366@1|root,COG0366@2|Bacteria,4NEVK@976|Bacteroidetes,47JQH@768503|Cytophagia	976|Bacteroidetes	G	Alpha amylase, catalytic domain	amyA2	-	-	-	-	-	-	-	-	-	-	-	Alpha-amylase,tRNA_SAD
BYD3_k127_2425118_1	1124780.ANNU01000023_gene3232	1.169e-190	608.0	COG0366@1|root,COG0366@2|Bacteria,4NEXF@976|Bacteroidetes,47MR6@768503|Cytophagia	976|Bacteroidetes	G	PFAM Alpha amylase, catalytic	-	GO:0000272,GO:0000287,GO:0001871,GO:0003674,GO:0003824,GO:0004553,GO:0004556,GO:0005488,GO:0005509,GO:0005575,GO:0005975,GO:0005976,GO:0005982,GO:0005983,GO:0006073,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009251,GO:0009987,GO:0016020,GO:0016052,GO:0016160,GO:0016787,GO:0016798,GO:0019867,GO:0030246,GO:0030247,GO:0043167,GO:0043169,GO:0043170,GO:0044042,GO:0044237,GO:0044238,GO:0044247,GO:0044248,GO:0044260,GO:0044262,GO:0044264,GO:0044275,GO:0046872,GO:0071704,GO:1901575,GO:2001070	3.2.1.1,3.2.1.133,3.2.1.135,3.2.1.54	ko:K01176,ko:K01208	ko00500,ko01100,ko04973,map00500,map01100,map04973	-	R02108,R02112,R03122,R11262	-	ko00000,ko00001,ko01000	-	GH13	-	Alpha-amylase,BACON,DUF3459
BYD3_k127_2425118_0	1237149.C900_02045	4.939e-227	720.0	COG0366@1|root,COG0366@2|Bacteria,4NFMM@976|Bacteroidetes,47KUA@768503|Cytophagia	976|Bacteroidetes	G	Maltosyltransferase that uses maltose 1-phosphate (M1P) as the sugar donor to elongate linear or branched alpha-(1- 4)- glucans. Is involved in a branched alpha-glucan biosynthetic pathway from trehalose, together with TreS, Mak and GlgB	glgE	-	2.4.99.16	ko:K16147	ko00500,ko01100,map00500,map01100	-	R09994	-	ko00000,ko00001,ko01000	-	GH13	-	Alpha-amylase,DUF3416
BYD3_k127_2425118_2	309801.trd_1931	7.626e-109	355.0	COG0366@1|root,COG3281@1|root,COG0366@2|Bacteria,COG3281@2|Bacteria,2G86T@200795|Chloroflexi,27XQK@189775|Thermomicrobia	189775|Thermomicrobia	G	Alpha-amylase domain	-	-	3.2.1.1,5.4.99.16	ko:K05343	ko00500,ko01100,map00500,map01100	-	R01557,R02108,R02112,R11262	RC01816	ko00000,ko00001,ko01000	-	GH13	-	APH,Alpha-amylase,Malt_amylase_C
BYD3_k127_2438406_7	1237149.C900_03149	3.965e-97	346.0	COG3209@1|root,COG4625@1|root,COG3209@2|Bacteria,COG4625@2|Bacteria	2|Bacteria	T	pathogenesis	rhgB	-	4.2.2.23	ko:K07004,ko:K18195,ko:K20276	ko02024,map02024	-	-	-	ko00000,ko00001,ko01000	-	PL4	-	CBM-like,He_PIG,RhgB_N,SprB,fn3_3
BYD3_k127_2438406_6	313606.M23134_02851	9.143e-177	571.0	COG1680@1|root,COG1680@2|Bacteria,4NFUI@976|Bacteroidetes,47NUP@768503|Cytophagia	976|Bacteroidetes	V	Domain of unknown function (DUF3471)	-	-	-	-	-	-	-	-	-	-	-	-	Beta-lactamase,DUF3471
BYD3_k127_2438406_4	762903.Pedsa_1107	3.581e-190	602.0	COG0415@1|root,COG0415@2|Bacteria,4NEDW@976|Bacteroidetes,1IQZJ@117747|Sphingobacteriia	976|Bacteroidetes	L	DNA photolyase	phr	-	4.1.99.3	ko:K01669	-	-	-	-	ko00000,ko01000,ko03400	-	-	-	DNA_photolyase,FAD_binding_7
BYD3_k127_2438406_5	761193.Runsl_2695	9.312e-182	592.0	COG4886@1|root,COG4886@2|Bacteria,4NG07@976|Bacteroidetes,47P4Q@768503|Cytophagia	976|Bacteroidetes	S	Chitobiase/beta-hexosaminidase C-terminal domain	-	-	-	-	-	-	-	-	-	-	-	-	CHB_HEX_C_1,Fn3_assoc,PSCyt1
BYD3_k127_2438406_1	761193.Runsl_2696	3.083e-272	842.0	COG4102@1|root,COG4102@2|Bacteria,4NE73@976|Bacteroidetes,47KYW@768503|Cytophagia	976|Bacteroidetes	S	Protein of unknown function (DUF1501)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1501
BYD3_k127_2438406_0	1089547.KB913013_gene4651	0.0	1105.0	COG2010@1|root,COG2010@2|Bacteria,4NEPV@976|Bacteroidetes,47P04@768503|Cytophagia	976|Bacteroidetes	C	Protein of unknown function (DUF1549)	-	-	-	-	-	-	-	-	-	-	-	-	PSCyt1,PSCyt2,PSD1
BYD3_k127_2438406_10	1237149.C900_03617	2.087e-57	203.0	COG4276@1|root,COG4276@2|Bacteria,4NQJG@976|Bacteroidetes,47QN0@768503|Cytophagia	976|Bacteroidetes	S	SRPBCC domain-containing protein	-	-	-	-	-	-	-	-	-	-	-	-	Polyketide_cyc
BYD3_k127_2438406_8	1237149.C900_03616	8.843e-68	233.0	COG3000@1|root,COG3000@2|Bacteria,4NMA9@976|Bacteroidetes,47PV8@768503|Cytophagia	976|Bacteroidetes	I	PFAM Fatty acid hydroxylase	crtZ	-	1.14.15.24	ko:K15746	ko00906,ko01100,ko01110,map00906,map01100,map01110	M00372	R07530,R07558,R07559,R07561,R07562,R07568,R07569,R07570,R07572,R07851,R09747	RC00478,RC00704,RC02629	ko00000,ko00001,ko00002,ko01000	-	-	-	FA_hydroxylase
BYD3_k127_2438406_9	1237149.C900_03615	8.683e-66	232.0	arCOG05416@1|root,2ZZTD@2|Bacteria,4NNMY@976|Bacteroidetes,47Q57@768503|Cytophagia	976|Bacteroidetes	S	lycopene cyclase	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_2438406_3	1239962.C943_00386	3.032e-223	717.0	COG0577@1|root,COG0577@2|Bacteria,4NDUK@976|Bacteroidetes,47JJN@768503|Cytophagia	976|Bacteroidetes	V	FtsX-like permease family	-	-	-	-	-	-	-	-	-	-	-	-	FtsX,MacB_PCD
BYD3_k127_2438406_2	1237149.C900_05293	2.135e-236	751.0	COG0577@1|root,COG0577@2|Bacteria,4NKYD@976|Bacteroidetes,47MU6@768503|Cytophagia	976|Bacteroidetes	V	MacB-like periplasmic core domain	-	-	-	-	-	-	-	-	-	-	-	-	FtsX,MacB_PCD
BYD3_k127_243973_4	1123248.KB893359_gene2013	1.612e-13	73.0	COG5502@1|root,COG5502@2|Bacteria,4NN8N@976|Bacteroidetes	976|Bacteroidetes	S	Uncharacterized conserved protein (DUF2267)	-	-	-	-	-	-	-	-	-	-	-	-	DUF2267
BYD3_k127_243973_3	1123248.KB893316_gene4665	8.078e-111	364.0	COG2834@1|root,COG2834@2|Bacteria,4NIT5@976|Bacteroidetes,1IWMK@117747|Sphingobacteriia	976|Bacteroidetes	M	Outer membrane lipoprotein-sorting protein	-	-	-	-	-	-	-	-	-	-	-	-	LolA_like
BYD3_k127_243973_0	468059.AUHA01000007_gene2661	2.83e-160	514.0	COG4591@1|root,COG4591@2|Bacteria,4NGJ3@976|Bacteroidetes,1IVEI@117747|Sphingobacteriia	976|Bacteroidetes	M	MacB-like periplasmic core domain	-	-	-	-	-	-	-	-	-	-	-	-	FtsX,MacB_PCD
BYD3_k127_243973_1	468059.AUHA01000007_gene2662	9.23e-135	440.0	COG4591@1|root,COG4591@2|Bacteria,4NHBR@976|Bacteroidetes,1IVIT@117747|Sphingobacteriia	976|Bacteroidetes	M	MacB-like periplasmic core domain	-	-	-	-	-	-	-	-	-	-	-	-	FtsX,MacB_PCD
BYD3_k127_243973_2	1237149.C900_02164	8.361e-117	378.0	COG1136@1|root,COG1136@2|Bacteria,4NE5N@976|Bacteroidetes,47PZY@768503|Cytophagia	976|Bacteroidetes	V	ATPases associated with a variety of cellular activities	-	-	-	ko:K02003	-	M00258	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	ABC_tran
BYD3_k127_2473598_6	387093.SUN_0968	9.016e-05	44.0	COG0508@1|root,COG0508@2|Bacteria,1MUGY@1224|Proteobacteria,42PEC@68525|delta/epsilon subdivisions,2YRB8@29547|Epsilonproteobacteria	29547|Epsilonproteobacteria	C	2-oxoacid dehydrogenases acyltransferase (catalytic domain)	-	-	2.3.1.12	ko:K00627	ko00010,ko00020,ko00620,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00020,map00620,map01100,map01110,map01120,map01130,map01200	M00307	R00209,R02569	RC00004,RC02742,RC02857	br01601,ko00000,ko00001,ko00002,ko01000	-	-	-	2-oxoacid_dh,Biotin_lipoyl
BYD3_k127_2473598_1	1237149.C900_03073	3.936e-177	559.0	COG0022@1|root,COG0022@2|Bacteria,4NFYK@976|Bacteroidetes,47TNM@768503|Cytophagia	976|Bacteroidetes	C	Transketolase, pyrimidine binding domain	-	-	1.2.4.1	ko:K00162	ko00010,ko00020,ko00620,ko01100,ko01110,ko01120,ko01130,ko01200,ko04066,ko04922,ko05230,map00010,map00020,map00620,map01100,map01110,map01120,map01130,map01200,map04066,map04922,map05230	M00307	R00014,R00209,R01699,R03270	RC00004,RC00027,RC00627,RC02742,RC02744,RC02882	br01601,ko00000,ko00001,ko00002,ko01000	-	-	-	Transket_pyr,Transketolase_C
BYD3_k127_2473598_3	700598.Niako_4028	3.724e-54	196.0	COG0778@1|root,COG0778@2|Bacteria,4NPZV@976|Bacteroidetes	976|Bacteroidetes	C	Nitroreductase family	-	-	-	-	-	-	-	-	-	-	-	-	Nitroreductase,TM1586_NiRdase
BYD3_k127_2473598_4	1121324.CLIT_11c02940	4.279e-43	161.0	COG3324@1|root,COG3324@2|Bacteria,1U9T0@1239|Firmicutes,256I7@186801|Clostridia	2|Bacteria	E	translation initiation factor activity	-	-	-	ko:K06996	-	-	-	-	ko00000	-	-	-	Glyoxalase
BYD3_k127_2473598_2	1237149.C900_03075	3.53e-169	536.0	COG1071@1|root,COG1071@2|Bacteria,4NJMZ@976|Bacteroidetes,47U8U@768503|Cytophagia	976|Bacteroidetes	C	The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2)	-	-	1.2.4.1	ko:K00161	ko00010,ko00020,ko00620,ko01100,ko01110,ko01120,ko01130,ko01200,ko04066,ko04922,ko05230,map00010,map00020,map00620,map01100,map01110,map01120,map01130,map01200,map04066,map04922,map05230	M00307	R00014,R00209,R01699,R03270	RC00004,RC00027,RC00627,RC02742,RC02744,RC02882	br01601,ko00000,ko00001,ko00002,ko01000	-	-	-	E1_dh
BYD3_k127_2473598_0	1237149.C900_03076	1.479e-306	946.0	COG0365@1|root,COG0365@2|Bacteria,4NEAD@976|Bacteroidetes,47TSB@768503|Cytophagia	976|Bacteroidetes	I	AMP-binding enzyme C-terminal domain	-	-	6.2.1.1	ko:K01895	ko00010,ko00620,ko00640,ko00680,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00620,map00640,map00680,map00720,map01100,map01110,map01120,map01130,map01200	M00357	R00235,R00236,R00316,R00926,R01354	RC00004,RC00012,RC00043,RC00070,RC02746,RC02816	ko00000,ko00001,ko00002,ko01000,ko01004	-	-	-	AMP-binding,AMP-binding_C
BYD3_k127_2473598_5	313606.M23134_01180	6.699e-08	59.0	COG0589@1|root,COG0589@2|Bacteria,4NFZ5@976|Bacteroidetes,47PIA@768503|Cytophagia	976|Bacteroidetes	T	Universal stress protein	-	-	-	-	-	-	-	-	-	-	-	-	Usp
BYD3_k127_249759_4	714943.Mucpa_3268	5.058e-23	102.0	COG0438@1|root,COG0438@2|Bacteria	2|Bacteria	M	transferase activity, transferring glycosyl groups	-	-	-	-	-	-	-	-	-	-	-	-	Glyco_trans_1_4,Glyco_transf_4,Glycos_transf_1
BYD3_k127_249759_5	1163409.UUA_15263	1.924e-11	75.0	COG1853@1|root,COG1853@2|Bacteria	2|Bacteria	S	FMN binding	flr	-	-	-	-	-	-	-	-	-	-	-	Flavin_Reduct
BYD3_k127_249759_0	700598.Niako_4335	2.044e-239	749.0	COG1032@1|root,COG1032@2|Bacteria,4NH8Y@976|Bacteroidetes,1IRE5@117747|Sphingobacteriia	976|Bacteroidetes	C	B12 binding domain	-	-	-	-	-	-	-	-	-	-	-	-	B12-binding,Radical_SAM
BYD3_k127_249759_2	945713.IALB_2761	5.627e-55	199.0	COG2890@1|root,COG2890@2|Bacteria	2|Bacteria	J	protein-(glutamine-N5) methyltransferase activity	prmC	-	2.1.1.297,2.7.7.87	ko:K02493,ko:K07566	-	-	R10463,R10806	RC00003,RC00745,RC03279	ko00000,ko01000,ko03009,ko03012,ko03016	-	-	-	MTS
BYD3_k127_249759_3	485918.Cpin_2164	5.812e-40	153.0	COG3437@1|root,COG3437@2|Bacteria,4PN7C@976|Bacteroidetes	976|Bacteroidetes	T	cheY-homologous receiver domain	-	-	-	-	-	-	-	-	-	-	-	-	Response_reg
BYD3_k127_249759_1	761193.Runsl_4419	8.531e-85	284.0	COG0438@1|root,COG0561@1|root,COG0438@2|Bacteria,COG0561@2|Bacteria,4NJQY@976|Bacteroidetes,47XD7@768503|Cytophagia	976|Bacteroidetes	M	Sucrose synthase	-	-	2.4.1.14	ko:K00696	ko00500,ko01100,map00500,map01100	-	R00766	RC00005,RC00028,RC02748	ko00000,ko00001,ko01000	-	GT4	-	Glyco_transf_4,Glycos_transf_1,S6PP,Sucrose_synth
BYD3_k127_2500855_3	1123277.KB893173_gene1696	2.012e-11	70.0	2CBBA@1|root,3313Q@2|Bacteria,4NWRR@976|Bacteroidetes	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_2500855_1	509635.N824_26345	4.673e-47	175.0	COG1595@1|root,COG1595@2|Bacteria,4NQR9@976|Bacteroidetes,1IST5@117747|Sphingobacteriia	976|Bacteroidetes	K	Belongs to the sigma-70 factor family. ECF subfamily	-	-	-	ko:K03088	-	-	-	-	ko00000,ko03021	-	-	-	Sigma70_r2,Sigma70_r4_2
BYD3_k127_2500855_0	761193.Runsl_4441	1.861e-311	968.0	COG1649@1|root,COG1649@2|Bacteria,4NJ20@976|Bacteroidetes,47NNM@768503|Cytophagia	976|Bacteroidetes	S	PFAM Uncharacterised BCR, COG1649	-	-	-	-	-	-	-	-	-	-	-	-	GHL6
BYD3_k127_2500855_2	926556.Echvi_2741	1.16e-23	103.0	COG2827@1|root,COG2827@2|Bacteria,4NUYX@976|Bacteroidetes,47RSS@768503|Cytophagia	976|Bacteroidetes	L	GIY-YIG catalytic domain	-	-	-	ko:K07461	-	-	-	-	ko00000	-	-	-	GIY-YIG
BYD3_k127_2524850_0	1237149.C900_04102	2.773e-241	783.0	COG2911@1|root,COG2911@2|Bacteria,4NF7F@976|Bacteroidetes,47KQP@768503|Cytophagia	976|Bacteroidetes	S	PFAM Family of	-	-	-	-	-	-	-	-	-	-	-	-	TamB
BYD3_k127_2524850_1	1120965.AUBV01000005_gene1830	2.428e-162	516.0	COG0533@1|root,COG0533@2|Bacteria,4NE8E@976|Bacteroidetes,47JX0@768503|Cytophagia	976|Bacteroidetes	O	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction	tsaD	GO:0000408,GO:0002949,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0032991,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0070525,GO:0071704,GO:0090304,GO:1901360	2.3.1.234	ko:K01409	-	-	R10648	RC00070,RC00416	ko00000,ko01000,ko03016	-	-	-	Peptidase_M22
BYD3_k127_2524850_8	1124780.ANNU01000040_gene393	4.287e-42	158.0	COG5496@1|root,COG5496@2|Bacteria,4P643@976|Bacteroidetes,47VXQ@768503|Cytophagia	976|Bacteroidetes	S	Thioesterase	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_2524850_7	1237149.C900_04099	6.518e-61	213.0	COG0691@1|root,COG0691@2|Bacteria,4NNJU@976|Bacteroidetes,47PRC@768503|Cytophagia	976|Bacteroidetes	J	the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA	smpB	-	-	ko:K03664	-	-	-	-	ko00000	-	-	-	SmpB
BYD3_k127_2524850_4	643867.Ftrac_0059	2.16e-103	342.0	COG0791@1|root,COG0791@2|Bacteria,4NE2T@976|Bacteroidetes,47PND@768503|Cytophagia	976|Bacteroidetes	M	Cell wall-associated hydrolase (invasion-associated protein)	ykfC	-	-	-	-	-	-	-	-	-	-	-	NLPC_P60,SH3_3
BYD3_k127_2524850_6	1185876.BN8_05686	1.248e-63	222.0	COG1403@1|root,COG1403@2|Bacteria,4NJ0T@976|Bacteroidetes,47MEF@768503|Cytophagia	976|Bacteroidetes	L	HNH endonuclease	-	-	-	-	-	-	-	-	-	-	-	-	HNH,HNH_5
BYD3_k127_2524850_3	1166018.FAES_4390	2.281e-110	362.0	COG1028@1|root,COG1028@2|Bacteria,4NH6Y@976|Bacteroidetes,47JEU@768503|Cytophagia	976|Bacteroidetes	IQ	PFAM Short-chain dehydrogenase reductase SDR	-	-	-	-	-	-	-	-	-	-	-	-	adh_short_C2
BYD3_k127_2524850_2	1121011.AUCB01000006_gene985	1.332e-133	430.0	COG0179@1|root,COG0179@2|Bacteria,4NFMZ@976|Bacteroidetes,1HYU7@117743|Flavobacteriia,23GEV@178469|Arenibacter	976|Bacteroidetes	Q	Fumarylacetoacetate (FAA) hydrolase family	-	-	-	-	-	-	-	-	-	-	-	-	FAA_hydrolase
BYD3_k127_2524850_5	1121904.ARBP01000004_gene1067	8.75e-102	367.0	COG0457@1|root,COG4995@1|root,COG0457@2|Bacteria,COG4995@2|Bacteria,4NHCZ@976|Bacteroidetes	976|Bacteroidetes	K	COG0457 FOG TPR repeat	-	-	-	-	-	-	-	-	-	-	-	-	CHAT,TPR_12
BYD3_k127_2524850_9	1296416.JACB01000040_gene1917	2.779e-18	94.0	COG0457@1|root,COG0457@2|Bacteria,4NQ3P@976|Bacteroidetes,1I2ED@117743|Flavobacteriia,2YKK9@290174|Aquimarina	976|Bacteroidetes	S	COG0457 FOG TPR repeat	-	-	-	-	-	-	-	-	-	-	-	-	TPR_6
BYD3_k127_2524850_10	1121904.ARBP01000004_gene776	3.626e-14	76.0	COG1595@1|root,COG1595@2|Bacteria,4NTAA@976|Bacteroidetes,47SFT@768503|Cytophagia	976|Bacteroidetes	K	COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog	-	-	-	-	-	-	-	-	-	-	-	-	Sigma70_r2
BYD3_k127_2528673_2	485918.Cpin_5676	4.864e-55	202.0	COG3239@1|root,COG3239@2|Bacteria,4NERD@976|Bacteroidetes,1IRWK@117747|Sphingobacteriia	976|Bacteroidetes	I	PFAM Fatty acid desaturase	-	-	1.14.19.3	ko:K00508	ko00591,ko01100,map00591,map01100	-	R07063	RC00917	ko00000,ko00001,ko01000,ko01004	-	-	-	FA_desaturase
BYD3_k127_2528673_4	932678.THERU_01620	2.768e-07	61.0	COG3233@1|root,COG3233@2|Bacteria	2|Bacteria	G	deacetylase	-	-	-	ko:K06986	-	-	-	-	ko00000	-	-	-	DUF2334
BYD3_k127_2528673_3	1280001.BAOA01000119_gene199	2.706e-26	117.0	COG1216@1|root,COG1216@2|Bacteria,1QMWM@1224|Proteobacteria,1RS3K@1236|Gammaproteobacteria,1XSEB@135623|Vibrionales	135623|Vibrionales	S	COG0463 Glycosyltransferases involved in cell wall biogenesis	-	-	-	ko:K00786	-	-	-	-	ko00000,ko01000	-	-	-	Glycos_transf_2
BYD3_k127_2528673_0	938709.AUSH02000016_gene635	1.006e-98	331.0	COG0726@1|root,COG0726@2|Bacteria,4NHXH@976|Bacteroidetes	976|Bacteroidetes	G	polysaccharide deacetylase	-	-	-	-	-	-	-	-	-	-	-	-	DUF3473,Polysacc_deac_1
BYD3_k127_2528673_1	938709.AUSH02000016_gene636	9.268e-90	302.0	COG0463@1|root,COG0463@2|Bacteria,4NGGM@976|Bacteroidetes	976|Bacteroidetes	M	glycosyl transferase family 2	-	-	-	ko:K20534	-	-	-	-	ko00000,ko01000,ko01005,ko02000	4.D.2.1.9	GT2	-	Glycos_transf_2
BYD3_k127_2531756_0	1237149.C900_01997	2.913e-244	768.0	COG2070@1|root,COG2070@2|Bacteria,4NEGW@976|Bacteroidetes,47JXU@768503|Cytophagia	976|Bacteroidetes	S	2-Nitropropane dioxygenase	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_2531756_1	1237149.C900_01994	5.948e-58	208.0	COG0664@1|root,COG0664@2|Bacteria,4NM5E@976|Bacteroidetes,47R9U@768503|Cytophagia	976|Bacteroidetes	K	Cyclic nucleotide-monophosphate binding domain	-	-	-	-	-	-	-	-	-	-	-	-	HTH_Crp_2,cNMP_binding
BYD3_k127_253642_4	1237149.C900_03333	3.133e-196	617.0	COG0215@1|root,COG0215@2|Bacteria,4NE3Y@976|Bacteroidetes,47MAW@768503|Cytophagia	976|Bacteroidetes	J	Belongs to the class-I aminoacyl-tRNA synthetase family	cysS	GO:0000166,GO:0003674,GO:0003824,GO:0004812,GO:0004817,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006423,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0017076,GO:0019538,GO:0019752,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0034645,GO:0034660,GO:0035639,GO:0036094,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0097159,GO:0097367,GO:0140098,GO:0140101,GO:1901265,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576	6.1.1.16	ko:K01883	ko00970,map00970	M00359,M00360	R03650	RC00055,RC00523	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	-	-	-	DALR_2,tRNA-synt_1e
BYD3_k127_253642_0	929562.Emtol_1222	0.0	1367.0	COG1629@1|root,COG1629@2|Bacteria,COG4771@2|Bacteria,4NDXS@976|Bacteroidetes,47KDP@768503|Cytophagia	976|Bacteroidetes	P	TonB dependent receptor	-	-	-	-	-	-	-	-	-	-	-	-	CarbopepD_reg_2,Plug,TonB_dep_Rec
BYD3_k127_253642_3	471854.Dfer_4947	5.187e-241	758.0	COG0561@1|root,COG0561@2|Bacteria,4PKHD@976|Bacteroidetes,47KAD@768503|Cytophagia	976|Bacteroidetes	S	PFAM RagB SusD domain protein	-	-	-	ko:K21572	-	-	-	-	ko00000,ko02000	8.A.46.1,8.A.46.3	-	-	SusD-like_3,SusD_RagB
BYD3_k127_253642_1	1189612.A33Q_3407	0.0	1265.0	COG4888@1|root,COG4888@2|Bacteria,4NEE8@976|Bacteroidetes,47JJ5@768503|Cytophagia	976|Bacteroidetes	S	ASPIC and UnbV	-	-	-	-	-	-	-	-	-	-	-	-	UnbV_ASPIC,VCBS
BYD3_k127_253642_5	714943.Mucpa_4707	1.731e-99	334.0	COG1801@1|root,COG1801@2|Bacteria,4NHAD@976|Bacteroidetes,1IP8N@117747|Sphingobacteriia	976|Bacteroidetes	S	Protein of unknown function DUF72	-	-	-	-	-	-	-	-	-	-	-	-	DUF72
BYD3_k127_253642_6	1237149.C900_03338	9.587e-82	275.0	COG0307@1|root,COG0307@2|Bacteria,4NHI8@976|Bacteroidetes,47TX8@768503|Cytophagia	976|Bacteroidetes	H	Lumazine binding domain	ribE	-	2.5.1.9	ko:K00793	ko00740,ko01100,ko01110,map00740,map01100,map01110	M00125	R00066	RC00958,RC00960	ko00000,ko00001,ko00002,ko01000	-	-	-	Lum_binding
BYD3_k127_253642_11	1453505.JASY01000003_gene2146	8.963e-05	47.0	2E12W@1|root,32WIH@2|Bacteria,4NTHQ@976|Bacteroidetes,1IBTE@117743|Flavobacteriia,2NSE3@237|Flavobacterium	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	DUF937
BYD3_k127_253642_10	1123248.KB893348_gene100	1.384e-10	66.0	2B3U2@1|root,31WHV@2|Bacteria,4PJYJ@976|Bacteroidetes,1IYX3@117747|Sphingobacteriia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_253642_8	1237149.C900_03339	3.091e-61	216.0	COG0671@1|root,COG0671@2|Bacteria,4NNVQ@976|Bacteroidetes,47RBP@768503|Cytophagia	976|Bacteroidetes	I	PFAM PAP2 superfamily	ybjG	GO:0003674,GO:0003824,GO:0005975,GO:0006629,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009605,GO:0009607,GO:0009987,GO:0016051,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0019637,GO:0042578,GO:0043207,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044403,GO:0044413,GO:0044415,GO:0044419,GO:0046467,GO:0046493,GO:0050896,GO:0051701,GO:0051704,GO:0051707,GO:0051832,GO:0051834,GO:0052173,GO:0052200,GO:0071704,GO:0075136,GO:0090407,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509	3.6.1.27	ko:K19302	ko00550,map00550	-	R05627	RC00002	ko00000,ko00001,ko01000,ko01011	-	-	-	PAP2
BYD3_k127_253642_7	1279009.ADICEAN_02240	8.02e-71	265.0	COG4251@1|root,COG4251@2|Bacteria,4NFC3@976|Bacteroidetes,47JSC@768503|Cytophagia	976|Bacteroidetes	T	His Kinase A (phosphoacceptor) domain	-	-	-	-	-	-	-	-	-	-	-	-	GAF,GAF_2,HATPase_c,HisKA,PAS,PAS_3,PAS_4,PAS_9,Response_reg
BYD3_k127_253642_2	1237149.C900_03312	4.291e-254	791.0	COG1249@1|root,COG1249@2|Bacteria,4NJ2P@976|Bacteroidetes,47NRN@768503|Cytophagia	976|Bacteroidetes	C	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain	-	-	1.8.1.4	ko:K00382	ko00010,ko00020,ko00260,ko00280,ko00620,ko00630,ko00640,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00020,map00260,map00280,map00620,map00630,map00640,map01100,map01110,map01120,map01130,map01200	M00009,M00011,M00036,M00307,M00532	R00209,R01221,R01698,R03815,R07618,R08549	RC00004,RC00022,RC00583,RC02742,RC02833,RC02834	br01601,ko00000,ko00001,ko00002,ko01000,ko04147	-	-	-	Pyr_redox_2,Pyr_redox_dim
BYD3_k127_253642_9	1237149.C900_03320	2.248e-44	163.0	COG0139@1|root,COG0140@1|root,COG0139@2|Bacteria,COG0140@2|Bacteria,4NERE@976|Bacteroidetes,47KYT@768503|Cytophagia	976|Bacteroidetes	E	Belongs to the PRA-CH family	hisI	-	3.5.4.19,3.6.1.31	ko:K11755	ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230	M00026	R04035,R04037	RC00002,RC01055	ko00000,ko00001,ko00002,ko01000	-	-	-	PRA-CH,PRA-PH
BYD3_k127_2536938_0	1237149.C900_05195	3.905e-292	913.0	COG1198@1|root,COG1198@2|Bacteria,4NFHB@976|Bacteroidetes,47K5C@768503|Cytophagia	976|Bacteroidetes	L	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA	priA	-	-	ko:K04066	ko03440,map03440	-	-	-	ko00000,ko00001,ko01000,ko03400	-	-	-	DEAD,Helicase_C,ResIII
BYD3_k127_2536938_1	761193.Runsl_0088	1.107e-239	747.0	COG3669@1|root,COG4409@1|root,COG4692@1|root,COG3669@2|Bacteria,COG4409@2|Bacteria,COG4692@2|Bacteria,4NEDX@976|Bacteroidetes,47JNA@768503|Cytophagia	976|Bacteroidetes	G	Coagulation factor 5 8 type domain protein	-	-	3.2.1.51	ko:K01206	ko00511,map00511	-	-	-	ko00000,ko00001,ko01000,ko04147	-	GH29	-	Alpha_L_fucos,CHB_HEX_C_1,F5_F8_type_C,Fn3_assoc
BYD3_k127_2550643_15	1305737.JAFX01000001_gene2949	9.679e-09	57.0	COG0127@1|root,COG0127@2|Bacteria,4NM42@976|Bacteroidetes,47PE9@768503|Cytophagia	976|Bacteroidetes	F	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions	rdgB	GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009141,GO:0009143,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046434,GO:0046483,GO:0046700,GO:0047429,GO:0055086,GO:0071704,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901575,GO:1901576	3.6.1.66	ko:K02428	ko00230,map00230	-	R00426,R00720,R01855,R02100,R02720,R03531	RC00002	ko00000,ko00001,ko01000	-	-	-	Ham1p_like
BYD3_k127_2550643_12	313606.M23134_08046	3.764e-22	107.0	COG0545@1|root,COG0545@2|Bacteria,4NDW4@976|Bacteroidetes,47KIJ@768503|Cytophagia	976|Bacteroidetes	O	Peptidyl-prolyl cis-trans isomerase	ppiB	-	5.2.1.8	ko:K01802,ko:K03767,ko:K03772	ko01503,ko04217,map01503,map04217	-	-	-	ko00000,ko00001,ko01000,ko03110,ko04147	-	-	-	FKBP_C,Pro_isomerase
BYD3_k127_2550643_11	643867.Ftrac_2531	1.006e-33	141.0	COG0545@1|root,COG0545@2|Bacteria,4NDW4@976|Bacteroidetes,47KIJ@768503|Cytophagia	976|Bacteroidetes	O	Peptidyl-prolyl cis-trans isomerase	ppiB	-	5.2.1.8	ko:K01802,ko:K03767	ko01503,ko04217,map01503,map04217	-	-	-	ko00000,ko00001,ko01000,ko03110,ko04147	-	-	-	FKBP_C,Pro_isomerase
BYD3_k127_2550643_4	1279009.ADICEAN_02596	1.135e-131	428.0	COG0618@1|root,COG0618@2|Bacteria,4NEXE@976|Bacteroidetes,47JVC@768503|Cytophagia	976|Bacteroidetes	S	phosphoesterase RecJ domain protein	nrnA	-	3.1.13.3,3.1.3.7	ko:K06881	ko00920,ko01100,ko01120,map00920,map01100,map01120	-	R00188,R00508	RC00078	ko00000,ko00001,ko01000,ko03400	-	-	-	DHH,DHHA1
BYD3_k127_2550643_7	1185876.BN8_05460	7.291e-65	226.0	COG0105@1|root,COG0105@2|Bacteria,4NM5B@976|Bacteroidetes,47PQ3@768503|Cytophagia	976|Bacteroidetes	F	Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate	ndk	-	2.7.4.6	ko:K00940	ko00230,ko00240,ko00983,ko01100,ko01110,ko01130,ko04016,map00230,map00240,map00983,map01100,map01110,map01130,map04016	M00049,M00050,M00052,M00053	R00124,R00139,R00156,R00330,R00570,R00722,R01137,R01857,R02093,R02326,R02331,R03530,R11894,R11895	RC00002	ko00000,ko00001,ko00002,ko01000,ko04131	-	-	-	NDK
BYD3_k127_2550643_2	1239962.C943_03552	1.242e-148	480.0	COG1835@1|root,COG1835@2|Bacteria,4NHPE@976|Bacteroidetes,47JWZ@768503|Cytophagia	976|Bacteroidetes	I	Acyltransferase family	-	-	-	ko:K11941	-	-	-	-	ko00000,ko01000	-	-	-	Acyl_transf_3
BYD3_k127_2550643_14	1121373.KB903665_gene3027	1.645e-15	78.0	2ECIG@1|root,33HGA@2|Bacteria,4NXUX@976|Bacteroidetes,47T4J@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_2550643_8	1237149.C900_01745	2.16e-61	213.0	COG0234@1|root,COG0234@2|Bacteria,4NRE1@976|Bacteroidetes,47Q9W@768503|Cytophagia	976|Bacteroidetes	O	Chaperonin 10 Kd subunit	-	-	-	-	-	-	-	-	-	-	-	-	Cpn10
BYD3_k127_2550643_1	1123277.KB893197_gene6125	9.748e-149	480.0	COG0526@1|root,COG1225@1|root,COG0526@2|Bacteria,COG1225@2|Bacteria,4NMEK@976|Bacteroidetes,47K5E@768503|Cytophagia	976|Bacteroidetes	CO	Redoxin	-	-	-	-	-	-	-	-	-	-	-	-	AhpC-TSA,Redoxin
BYD3_k127_2550643_3	1237149.C900_01743	1.121e-145	474.0	COG1322@1|root,COG1322@2|Bacteria,4NE04@976|Bacteroidetes,47MZE@768503|Cytophagia	976|Bacteroidetes	S	RmuC family	rmuC	-	-	ko:K09760	-	-	-	-	ko00000	-	-	-	RmuC
BYD3_k127_2550643_0	1121373.KB903662_gene75	3.514e-199	627.0	COG4992@1|root,COG4992@2|Bacteria,4NE93@976|Bacteroidetes,47K80@768503|Cytophagia	976|Bacteroidetes	E	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family	rocD	-	2.6.1.13	ko:K00819	ko00330,ko01100,ko01110,ko01130,map00330,map01100,map01110,map01130	-	R00667	RC00006,RC00062	ko00000,ko00001,ko01000,ko01007	-	-	-	Aminotran_3
BYD3_k127_2550643_10	926559.JoomaDRAFT_2565	8.118e-51	193.0	COG0410@1|root,COG0410@2|Bacteria,4PN83@976|Bacteroidetes,1IK80@117743|Flavobacteriia	976|Bacteroidetes	E	ABC transporter	-	-	-	-	-	-	-	-	-	-	-	-	ABC_tran
BYD3_k127_2550643_6	468059.AUHA01000002_gene316	3.281e-76	260.0	COG1011@1|root,COG1011@2|Bacteria,4NIMR@976|Bacteroidetes,1IPZN@117747|Sphingobacteriia	976|Bacteroidetes	S	TIGRFAM HAD-superfamily hydrolase, subfamily IA, variant 3	-	-	3.8.1.2	ko:K01560,ko:K07025	ko00361,ko00625,ko01100,ko01120,map00361,map00625,map01100,map01120	-	R05287	RC00697	ko00000,ko00001,ko01000	-	-	-	HAD_2
BYD3_k127_2550643_9	929556.Solca_1280	9.009e-54	194.0	COG1670@1|root,COG1670@2|Bacteria,4NPQC@976|Bacteroidetes,1ITCQ@117747|Sphingobacteriia	976|Bacteroidetes	J	Acetyltransferase (GNAT) domain	-	-	-	-	-	-	-	-	-	-	-	-	Acetyltransf_3
BYD3_k127_2550643_5	1123276.KB893281_gene4336	4.899e-98	331.0	COG0859@1|root,COG0859@2|Bacteria,4NEPH@976|Bacteroidetes,47MA4@768503|Cytophagia	976|Bacteroidetes	M	PFAM glycosyl transferase family 9	-	-	-	-	-	-	-	-	-	-	-	-	Glyco_transf_9
BYD3_k127_2550643_13	1122978.AUFP01000001_gene1119	7.24e-17	81.0	COG0463@1|root,COG0463@2|Bacteria,4NGJK@976|Bacteroidetes,2FM49@200643|Bacteroidia	976|Bacteroidetes	M	Protein of unknown function (DUF4254)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4254
BYD3_k127_2569913_3	1237149.C900_04392	1.706e-53	191.0	COG0315@1|root,COG0315@2|Bacteria,4NHA0@976|Bacteroidetes,47PU9@768503|Cytophagia	976|Bacteroidetes	H	MoaC family	moaC	-	4.6.1.17	ko:K03637	ko00790,ko01100,ko04122,map00790,map01100,map04122	-	R11372	RC03425	ko00000,ko00001,ko01000	-	-	-	MoaC
BYD3_k127_2569913_2	929703.KE386491_gene3652	3.582e-75	260.0	COG0664@1|root,COG0664@2|Bacteria,4PM2A@976|Bacteroidetes,47KHT@768503|Cytophagia	976|Bacteroidetes	T	Ion transport protein	-	-	-	ko:K10716	-	-	-	-	ko00000,ko02000	1.A.1.1,1.A.1.13,1.A.1.17,1.A.1.24,1.A.1.25,1.A.1.6	-	-	Ion_trans
BYD3_k127_2569913_4	643867.Ftrac_2998	6.804e-51	200.0	COG2885@1|root,COG2885@2|Bacteria,4NU83@976|Bacteroidetes,47VBR@768503|Cytophagia	976|Bacteroidetes	M	Pfam:DUF3308	-	-	-	-	-	-	-	-	-	-	-	-	OmpA,PorP_SprF
BYD3_k127_2569913_7	643867.Ftrac_2997	1.189e-36	160.0	COG3291@1|root,COG4733@1|root,COG3291@2|Bacteria,COG4733@2|Bacteria,4NRDH@976|Bacteroidetes	976|Bacteroidetes	M	amine dehydrogenase activity	-	-	-	-	-	-	-	-	-	-	-	-	CHU_C,PKD
BYD3_k127_2569913_9	873533.HMPREF0663_10617	1.258e-13	80.0	COG0810@1|root,COG0810@2|Bacteria,4NMG7@976|Bacteroidetes,2FPKW@200643|Bacteroidia	976|Bacteroidetes	M	Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins	-	-	-	ko:K03832	-	-	-	-	ko00000,ko02000	2.C.1.1	-	-	TonB_C
BYD3_k127_2569913_5	984262.SGRA_1732	9.566e-51	186.0	COG1595@1|root,COG1595@2|Bacteria,4NR8J@976|Bacteroidetes	976|Bacteroidetes	K	COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog	-	-	-	ko:K03088	-	-	-	-	ko00000,ko03021	-	-	-	Sigma70_r2,Sigma70_r4,Sigma70_r4_2
BYD3_k127_2569913_6	1121904.ARBP01000005_gene4463	1.6e-45	168.0	COG0314@1|root,COG0314@2|Bacteria,4NP1X@976|Bacteroidetes,47QJT@768503|Cytophagia	976|Bacteroidetes	H	Molybdopterin converting factor, large subunit	moaE	-	2.8.1.12	ko:K03635	ko00790,ko01100,ko04122,map00790,map01100,map04122	-	R09395	RC02507	ko00000,ko00001,ko01000	-	-	-	MoaE
BYD3_k127_2569913_8	172045.KS04_06640	7.198e-19	88.0	COG1977@1|root,COG1977@2|Bacteria,4NUVK@976|Bacteroidetes,1IGTC@117743|Flavobacteriia,34SAN@308865|Elizabethkingia	976|Bacteroidetes	H	ThiS family	moaD	-	-	ko:K03636	ko04122,map04122	-	-	-	ko00000,ko00001	-	-	-	ThiS
BYD3_k127_2569913_0	1123278.KB893557_gene3854	2.098e-137	444.0	COG2896@1|root,COG2896@2|Bacteria,4NFS9@976|Bacteroidetes,47K8J@768503|Cytophagia	976|Bacteroidetes	H	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate	moaA	-	4.1.99.22	ko:K03639	ko00790,ko01100,ko04122,map00790,map01100,map04122	-	R09394	RC03420	ko00000,ko00001,ko01000	-	-	-	Fer4_12,Fer4_14,Mob_synth_C,Radical_SAM
BYD3_k127_2569913_1	1237149.C900_04398	4.764e-101	336.0	COG4485@1|root,COG4485@2|Bacteria,4NEE5@976|Bacteroidetes,47ME6@768503|Cytophagia	976|Bacteroidetes	S	PFAM Bacterial membrane protein YfhO	-	-	-	-	-	-	-	-	-	-	-	-	YfhO
BYD3_k127_2574207_2	1218108.KB908298_gene3542	7.632e-66	228.0	COG2207@1|root,COG2207@2|Bacteria,4NM5G@976|Bacteroidetes,1I18C@117743|Flavobacteriia	976|Bacteroidetes	K	AraC family	-	-	-	-	-	-	-	-	-	-	-	-	HTH_18
BYD3_k127_2574207_0	1131812.JQMS01000001_gene2385	2.778e-260	817.0	COG0642@1|root,COG0784@1|root,COG5002@1|root,COG0642@2|Bacteria,COG0784@2|Bacteria,COG5002@2|Bacteria,4PKV1@976|Bacteroidetes,1IKKI@117743|Flavobacteriia,2P0QX@237|Flavobacterium	976|Bacteroidetes	T	His Kinase A (phosphoacceptor) domain	-	-	-	-	-	-	-	-	-	-	-	-	CHASE3,HATPase_c,HisKA,Hpt,PAS,PAS_4,PAS_9,Response_reg
BYD3_k127_2574207_3	1189620.AJXL01000022_gene2877	1.287e-60	213.0	COG0745@1|root,COG0745@2|Bacteria,4PP1Z@976|Bacteroidetes,1IN3P@117743|Flavobacteriia,2NWFJ@237|Flavobacterium	976|Bacteroidetes	KT	cheY-homologous receiver domain	-	-	-	-	-	-	-	-	-	-	-	-	Response_reg
BYD3_k127_2574207_1	1123248.KB893348_gene322	1.371e-171	546.0	COG2133@1|root,COG2133@2|Bacteria,4NF0B@976|Bacteroidetes	976|Bacteroidetes	G	glucose sorbosone	-	-	-	-	-	-	-	-	-	-	-	-	CBM_6,GSDH,Ig_2,Malectin,PKD,VCBS,fn3
BYD3_k127_2574207_5	237368.SCABRO_03016	2.863e-32	133.0	29Q4T@1|root,32VIV@2|Bacteria	2|Bacteria	S	23S rRNA-intervening sequence protein	-	-	-	-	-	-	-	-	-	-	-	-	23S_rRNA_IVP
BYD3_k127_2574207_4	1279009.ADICEAN_00864	2.42e-33	130.0	COG2860@1|root,COG2860@2|Bacteria,4NEXS@976|Bacteroidetes,47KVV@768503|Cytophagia	976|Bacteroidetes	S	UPF0126 domain	-	-	-	-	-	-	-	-	-	-	-	-	UPF0126
BYD3_k127_2576783_2	616991.JPOO01000001_gene3360	2.622e-45	165.0	COG2207@1|root,COG2207@2|Bacteria,4PI6R@976|Bacteroidetes,1IG3A@117743|Flavobacteriia,23IGX@178469|Arenibacter	976|Bacteroidetes	K	helix_turn_helix, arabinose operon control protein	-	-	-	-	-	-	-	-	-	-	-	-	HTH_18
BYD3_k127_2576783_8	319003.Bra1253DRAFT_08387	1.325e-10	70.0	2DBTP@1|root,2ZAZW@2|Bacteria,1QYZ8@1224|Proteobacteria,2TY2H@28211|Alphaproteobacteria,3K6W2@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	L-2-amino-thiazoline-4-carboxylic acid hydrolase	-	-	-	-	-	-	-	-	-	-	-	-	ATC_hydrolase
BYD3_k127_2576783_1	761193.Runsl_1946	2.69e-157	525.0	COG0577@1|root,COG0577@2|Bacteria,4NDUK@976|Bacteroidetes,47JJN@768503|Cytophagia	976|Bacteroidetes	V	FtsX-like permease family	-	-	-	ko:K02004	-	M00258	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	FtsX,MacB_PCD
BYD3_k127_2576783_4	1122990.BAJH01000013_gene1749	6.236e-24	111.0	COG0810@1|root,COG0810@2|Bacteria,4NFH6@976|Bacteroidetes,2FM72@200643|Bacteroidia	976|Bacteroidetes	M	Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins	-	-	-	ko:K03832	-	-	-	-	ko00000,ko02000	2.C.1.1	-	-	TonB_C
BYD3_k127_2576783_0	641524.ADICYQ_5472	1.376e-180	577.0	COG3119@1|root,COG3119@2|Bacteria,4NHH7@976|Bacteroidetes,47JYR@768503|Cytophagia	976|Bacteroidetes	P	PFAM sulfatase	mdsA	-	-	-	-	-	-	-	-	-	-	-	DUF4976,Sulfatase
BYD3_k127_2576783_6	1121912.AUHD01000031_gene272	3.541e-17	87.0	28JH1@1|root,2Z9AM@2|Bacteria,4NJYJ@976|Bacteroidetes,1I0ZC@117743|Flavobacteriia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_2576783_9	880071.Fleli_2793	8.645e-10	67.0	COG1520@1|root,COG3291@1|root,COG3391@1|root,COG3897@1|root,COG4409@1|root,COG1520@2|Bacteria,COG3291@2|Bacteria,COG3391@2|Bacteria,COG3897@2|Bacteria,COG4409@2|Bacteria,4NRYE@976|Bacteroidetes,47KIU@768503|Cytophagia	976|Bacteroidetes	O	TIGRFAM gliding motility-associated C-terminal domain	-	-	-	-	-	-	-	-	-	-	-	-	CHU_C,SprB
BYD3_k127_2576783_7	1121875.KB907549_gene1764	1.615e-11	72.0	COG4886@1|root,COG4886@2|Bacteria	2|Bacteria	S	regulation of response to stimulus	inlA	-	-	ko:K13730	ko05100,map05100	-	-	-	ko00000,ko00001	-	-	-	DUF285,LRR_4,LRR_6,Lectin_legB,Strep_his_triad
BYD3_k127_2576783_3	1464048.JNZS01000012_gene3323	1.737e-24	115.0	COG3250@1|root,COG3525@1|root,COG3250@2|Bacteria,COG3525@2|Bacteria,2GK90@201174|Actinobacteria,4DC7E@85008|Micromonosporales	201174|Actinobacteria	G	Glycosyl hydrolase family 20, domain 2	-	-	-	-	-	-	-	-	-	-	-	-	F5_F8_type_C,Glyco_hydro_20,Glyco_hydro_20b
BYD3_k127_2576783_5	573061.Clocel_4109	5.502e-18	95.0	COG3210@1|root,COG3210@2|Bacteria,1UJPN@1239|Firmicutes,25FF8@186801|Clostridia,36V40@31979|Clostridiaceae	186801|Clostridia	U	Bacterial Ig-like domain 2	-	-	-	-	-	-	-	-	-	-	-	-	Big_2,Flg_new
BYD3_k127_2594181_1	1123248.KB893386_gene1916	2.271e-26	111.0	COG0845@1|root,COG0845@2|Bacteria,4NITE@976|Bacteroidetes,1ISHH@117747|Sphingobacteriia	976|Bacteroidetes	M	SPTR Efflux transporter, RND family, MFP subunit	-	-	-	ko:K02005	-	-	-	-	ko00000	-	-	-	HlyD_3,HlyD_D23
BYD3_k127_2594181_2	1086011.HJ01_01812	3.723e-05	46.0	COG2217@1|root,COG2217@2|Bacteria,4NERS@976|Bacteroidetes,1HWUI@117743|Flavobacteriia,2NTWA@237|Flavobacterium	976|Bacteroidetes	P	Metal ABC transporter ATPase	-	-	3.6.3.3,3.6.3.5	ko:K01534	-	-	-	-	ko00000,ko01000	3.A.3.6	-	-	E1-E2_ATPase,Hydrolase
BYD3_k127_2594181_0	1123248.KB893328_gene923	3.924e-186	587.0	COG1814@1|root,COG1814@2|Bacteria,4NE6W@976|Bacteroidetes,1IRNA@117747|Sphingobacteriia	976|Bacteroidetes	S	VIT family	-	-	-	-	-	-	-	-	-	-	-	-	VIT1
BYD3_k127_262542_0	1237149.C900_05076	6.123e-230	713.0	COG1960@1|root,COG1960@2|Bacteria,4NEKJ@976|Bacteroidetes,47KQK@768503|Cytophagia	976|Bacteroidetes	I	acyl-CoA dehydrogenase	gcdH	-	1.3.8.6	ko:K00252	ko00071,ko00310,ko00362,ko00380,ko01100,ko01120,ko01130,map00071,map00310,map00362,map00380,map01100,map01120,map01130	M00032	R02487,R02488,R10074	RC00052,RC00156	ko00000,ko00001,ko00002,ko01000	-	-	-	Acyl-CoA_dh_1,Acyl-CoA_dh_M,Acyl-CoA_dh_N
BYD3_k127_262542_2	1237149.C900_03719	6.959e-95	322.0	2CG1Y@1|root,2Z9QX@2|Bacteria,4NJI6@976|Bacteroidetes,47PFJ@768503|Cytophagia	976|Bacteroidetes	S	Protein of unknown function (DUF1573)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1573
BYD3_k127_262542_1	1124780.ANNU01000032_gene1270	1.995e-160	510.0	COG0180@1|root,COG0180@2|Bacteria,4NETX@976|Bacteroidetes,47JNM@768503|Cytophagia	976|Bacteroidetes	J	Belongs to the class-I aminoacyl-tRNA synthetase family	trpS	-	6.1.1.2	ko:K01867	ko00970,map00970	M00359,M00360	R03664	RC00055,RC00523	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	-	-	-	tRNA-synt_1b
BYD3_k127_262542_3	1237149.C900_05647	5.071e-35	137.0	2DN0J@1|root,32UI3@2|Bacteria,4NT4U@976|Bacteroidetes,47R55@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_2633736_1	1237149.C900_04665	1.289e-167	533.0	COG1071@1|root,COG1071@2|Bacteria,4NF2J@976|Bacteroidetes,47M0Z@768503|Cytophagia	976|Bacteroidetes	C	The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2)	pdhA	-	1.2.4.1	ko:K00161	ko00010,ko00020,ko00620,ko01100,ko01110,ko01120,ko01130,ko01200,ko04066,ko04922,ko05230,map00010,map00020,map00620,map01100,map01110,map01120,map01130,map01200,map04066,map04922,map05230	M00307	R00014,R00209,R01699,R03270	RC00004,RC00027,RC00627,RC02742,RC02744,RC02882	br01601,ko00000,ko00001,ko00002,ko01000	-	-	-	E1_dh
BYD3_k127_2633736_2	1237149.C900_04663	1.077e-86	291.0	COG1729@1|root,COG1729@2|Bacteria,4NEM2@976|Bacteroidetes,47PPQ@768503|Cytophagia	976|Bacteroidetes	S	Tetratricopeptide repeat	-	-	-	-	-	-	-	-	-	-	-	-	TPR_16,TPR_21,TPR_6,TPR_7,TPR_8
BYD3_k127_2633736_4	926556.Echvi_1219	2.12e-62	217.0	COG0054@1|root,COG0054@2|Bacteria,4NNUC@976|Bacteroidetes,47PCJ@768503|Cytophagia	976|Bacteroidetes	H	Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin	ribH	GO:0000906,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006766,GO:0006767,GO:0006771,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009231,GO:0009987,GO:0016740,GO:0016765,GO:0017144,GO:0018130,GO:0034641,GO:0042364,GO:0042726,GO:0042727,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576	2.5.1.78	ko:K00794	ko00740,ko01100,ko01110,map00740,map01100,map01110	M00125	R04457	RC00960	ko00000,ko00001,ko00002,ko01000	-	-	-	DMRL_synthase
BYD3_k127_2633736_0	1313301.AUGC01000001_gene1409	2.082e-225	704.0	COG0538@1|root,COG0538@2|Bacteria,4PKW6@976|Bacteroidetes	976|Bacteroidetes	C	Isocitrate dehydrogenase	icd	-	1.1.1.42	ko:K00031	ko00020,ko00480,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01210,ko01230,ko04146,map00020,map00480,map00720,map01100,map01110,map01120,map01130,map01200,map01210,map01230,map04146	M00009,M00010,M00173,M00740	R00267,R00268,R01899	RC00001,RC00084,RC00114,RC00626,RC02801	br01601,ko00000,ko00001,ko00002,ko01000	-	-	-	Iso_dh
BYD3_k127_2633736_3	1237149.C900_02945	3.56e-74	253.0	COG2340@1|root,COG2340@2|Bacteria,4NRNN@976|Bacteroidetes,47RRN@768503|Cytophagia	976|Bacteroidetes	S	Cysteine-rich secretory protein family	-	-	-	-	-	-	-	-	-	-	-	-	CAP
BYD3_k127_2646814_0	760192.Halhy_5684	5.405e-85	284.0	COG2207@1|root,COG2207@2|Bacteria,4NM5G@976|Bacteroidetes,1ISDK@117747|Sphingobacteriia	976|Bacteroidetes	K	PFAM Bacterial regulatory helix-turn-helix proteins, AraC family	-	-	-	-	-	-	-	-	-	-	-	-	HTH_18
BYD3_k127_2646814_1	1121373.KB903620_gene2064	1.377e-31	128.0	COG1873@1|root,COG1873@2|Bacteria,4PKPS@976|Bacteroidetes,47XYE@768503|Cytophagia	976|Bacteroidetes	S	PRC-barrel domain	-	-	-	-	-	-	-	-	-	-	-	-	PRC
BYD3_k127_2646814_2	760192.Halhy_5677	6.692e-15	81.0	2AF5K@1|root,3154F@2|Bacteria,4PJCD@976|Bacteroidetes,1J00F@117747|Sphingobacteriia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_2646814_3	1218108.KB908298_gene3541	1.344e-10	63.0	2ENFE@1|root,33G2U@2|Bacteria,4NYZ4@976|Bacteroidetes,1I6C9@117743|Flavobacteriia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_265780_9	926549.KI421517_gene1979	6.933e-29	116.0	COG0600@1|root,COG0600@2|Bacteria,4NE2A@976|Bacteroidetes,47MTR@768503|Cytophagia	976|Bacteroidetes	P	Binding-protein-dependent transport system inner membrane component	-	-	-	ko:K15577	ko00910,ko02010,map00910,map02010	M00438	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.16.1,3.A.1.16.2	-	-	BPD_transp_1
BYD3_k127_265780_3	926549.KI421517_gene1978	6.755e-129	418.0	COG1116@1|root,COG1116@2|Bacteria,4NE9U@976|Bacteroidetes,47P3Q@768503|Cytophagia	976|Bacteroidetes	P	ATPases associated with a variety of cellular activities	-	-	-	ko:K02049,ko:K15579	ko00910,ko02010,map00910,map02010	M00188,M00438	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.16,3.A.1.16.1,3.A.1.16.2,3.A.1.17	-	-	ABC_tran
BYD3_k127_265780_0	1121904.ARBP01000009_gene4295	0.0	1657.0	COG0243@1|root,COG1251@1|root,COG0243@2|Bacteria,COG1251@2|Bacteria,4NG4N@976|Bacteroidetes,47JUR@768503|Cytophagia	976|Bacteroidetes	C	Belongs to the prokaryotic molybdopterin-containing oxidoreductase family	-	-	1.7.7.2	ko:K00367	ko00910,ko01120,map00910,map01120	M00531	R00791	RC02812	ko00000,ko00001,ko00002,ko01000	-	-	-	Fer2_BFD,Molybdop_Fe4S4,Molybdopterin,Molydop_binding,Pyr_redox_2
BYD3_k127_265780_2	1121904.ARBP01000009_gene4294	7.181e-154	500.0	COG0155@1|root,COG1773@1|root,COG0155@2|Bacteria,COG1773@2|Bacteria,4NHF0@976|Bacteroidetes,47M86@768503|Cytophagia	976|Bacteroidetes	C	Rubredoxin	rubR	-	-	-	-	-	-	-	-	-	-	-	Rubredoxin
BYD3_k127_265780_6	926556.Echvi_1900	2.662e-55	196.0	COG2146@1|root,COG2146@2|Bacteria,4NQQ8@976|Bacteroidetes,47QJ5@768503|Cytophagia	976|Bacteroidetes	P	TIGRFAM nitrite reductase NAD(P)H , small subunit	-	-	1.7.1.15	ko:K00363	ko00910,ko01120,map00910,map01120	M00530	R00787	RC00176	ko00000,ko00001,ko00002,ko01000	-	-	-	Rieske_2
BYD3_k127_265780_1	926556.Echvi_1901	0.0	1237.0	COG1251@1|root,COG1251@2|Bacteria,4NE44@976|Bacteroidetes,47M7X@768503|Cytophagia	976|Bacteroidetes	C	Nitrite and sulphite reductase 4Fe-4S	-	-	1.7.1.15	ko:K00362	ko00910,ko01120,map00910,map01120	M00530	R00787	RC00176	ko00000,ko00001,ko00002,ko01000	-	-	-	Fer2_BFD,NIR_SIR,NIR_SIR_ferr,Pyr_redox_2
BYD3_k127_265780_5	1121904.ARBP01000010_gene2382	3.081e-77	266.0	COG0007@1|root,COG0007@2|Bacteria,4NFVR@976|Bacteroidetes,47JQG@768503|Cytophagia	976|Bacteroidetes	H	TIGRFAM Uroporphyrin-III C-methyltransferase	-	-	2.1.1.107,4.2.1.75	ko:K02303,ko:K13542	ko00860,ko01100,ko01110,ko01120,map00860,map01100,map01110,map01120	M00121	R03165,R03194	RC00003,RC00871,RC01861	ko00000,ko00001,ko00002,ko01000	-	-	-	HEM4,TP_methylase
BYD3_k127_265780_8	103690.17129960	1.045e-43	164.0	2C6V4@1|root,2ZV3X@2|Bacteria,1G61D@1117|Cyanobacteria,1HNH3@1161|Nostocales	1117|Cyanobacteria	S	PFAM Conserved nitrate reductase-associated protein (Nitr_red_assoc)	-	-	-	-	-	-	-	-	-	-	-	-	Nitr_red_assoc
BYD3_k127_265780_7	760192.Halhy_3356	5.285e-47	175.0	COG0746@1|root,COG0746@2|Bacteria,4NMYW@976|Bacteroidetes,1IT7N@117747|Sphingobacteriia	976|Bacteroidetes	H	Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo- MPT) cofactor (Moco or molybdenum cofactor) to form Mo- molybdopterin guanine dinucleotide (Mo-MGD) cofactor	mobA	-	2.7.7.77	ko:K03752	ko00790,ko01100,map00790,map01100	-	R11581	-	ko00000,ko00001,ko01000	-	-	-	NTP_transf_3
BYD3_k127_265780_4	1121904.ARBP01000005_gene4748	2.284e-124	412.0	COG1070@1|root,COG1070@2|Bacteria,4NE3S@976|Bacteroidetes,47MWB@768503|Cytophagia	976|Bacteroidetes	G	Sugar (Pentulose and hexulose)	-	-	-	-	-	-	-	-	-	-	-	-	FGGY_C,FGGY_N
BYD3_k127_2677044_1	1124780.ANNU01000008_gene2647	7.289e-89	298.0	COG1127@1|root,COG1127@2|Bacteria,4NETJ@976|Bacteroidetes,47TJQ@768503|Cytophagia	976|Bacteroidetes	Q	ATPases associated with a variety of cellular activities	-	-	-	ko:K02065	ko02010,map02010	M00210,M00669,M00670	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.27	-	-	ABC_tran
BYD3_k127_2677044_2	1279009.ADICEAN_03656	2.135e-70	250.0	COG1463@1|root,COG1463@2|Bacteria,4NGHE@976|Bacteroidetes,47MRD@768503|Cytophagia	976|Bacteroidetes	Q	ABC-type transport system involved in resistance to organic solvents periplasmic component	-	-	-	ko:K02067	ko02010,map02010	M00210,M00669,M00670	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.27	-	-	MlaD
BYD3_k127_2677044_0	1279009.ADICEAN_02644	3.216e-250	796.0	COG5009@1|root,COG5009@2|Bacteria,4NECJ@976|Bacteroidetes,47MZQ@768503|Cytophagia	976|Bacteroidetes	M	Transglycosylase	-	-	2.4.1.129,3.4.16.4	ko:K05366	ko00550,ko01100,ko01501,map00550,map01100,map01501	-	-	-	ko00000,ko00001,ko01000,ko01003,ko01011	-	GT51	-	Transgly,Transpeptidase
BYD3_k127_2713349_0	1237149.C900_02826	4.203e-261	811.0	COG0567@1|root,COG0567@2|Bacteria,4NEU9@976|Bacteroidetes,47JXI@768503|Cytophagia	976|Bacteroidetes	C	2-oxoglutarate dehydrogenase, E1	sucA	-	1.2.4.2	ko:K00164	ko00020,ko00310,ko00380,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00310,map00380,map01100,map01110,map01120,map01130,map01200	M00009,M00011,M00032	R00621,R01933,R01940,R03316,R08549	RC00004,RC00027,RC00627,RC02743,RC02833,RC02883	br01601,ko00000,ko00001,ko00002,ko01000	-	-	-	2-oxoacid_dh,2-oxogl_dehyd_N,E1_dh,OxoGdeHyase_C,Transket_pyr
BYD3_k127_2713349_2	1237149.C900_02825	1.619e-202	641.0	COG0508@1|root,COG0508@2|Bacteria,4NF33@976|Bacteroidetes,47K2Z@768503|Cytophagia	976|Bacteroidetes	C	The 2-oxoglutarate dehydrogenase complex catalyzes the overall conversion of 2-oxoglutarate to succinyl-CoA and CO(2)	sucB	-	2.3.1.61	ko:K00658	ko00020,ko00310,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00310,map01100,map01110,map01120,map01130,map01200	M00009,M00011,M00032	R02570,R02571,R08549	RC00004,RC02727,RC02833	br01601,ko00000,ko00001,ko00002,ko01000	-	-	-	2-oxoacid_dh,Biotin_lipoyl,E3_binding
BYD3_k127_2713349_1	1237149.C900_02822	2.319e-246	766.0	COG1249@1|root,COG1249@2|Bacteria,4NDVC@976|Bacteroidetes,47K0E@768503|Cytophagia	976|Bacteroidetes	C	Dihydrolipoyl dehydrogenase	lpd	-	1.8.1.4	ko:K00382	ko00010,ko00020,ko00260,ko00280,ko00620,ko00630,ko00640,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00020,map00260,map00280,map00620,map00630,map00640,map01100,map01110,map01120,map01130,map01200	M00009,M00011,M00036,M00307,M00532	R00209,R01221,R01698,R03815,R07618,R08549	RC00004,RC00022,RC00583,RC02742,RC02833,RC02834	br01601,ko00000,ko00001,ko00002,ko01000,ko04147	-	-	-	Pyr_redox_2,Pyr_redox_dim
BYD3_k127_271603_4	1237149.C900_03407	3.729e-71	250.0	COG0457@1|root,COG0457@2|Bacteria,4P246@976|Bacteroidetes,47PGN@768503|Cytophagia	976|Bacteroidetes	S	Protein of unknown function (DUF2911)	-	-	-	-	-	-	-	-	-	-	-	-	DUF2911
BYD3_k127_271603_5	1121930.AQXG01000002_gene2320	1.078e-64	226.0	COG2094@1|root,COG2094@2|Bacteria,4NP22@976|Bacteroidetes,1IS50@117747|Sphingobacteriia	976|Bacteroidetes	L	Belongs to the DNA glycosylase MPG family	mpg	-	3.2.2.21	ko:K03652	ko03410,map03410	-	-	-	ko00000,ko00001,ko01000,ko03400	-	-	-	Pur_DNA_glyco
BYD3_k127_271603_1	1237149.C900_03404	4.949e-151	494.0	COG2885@1|root,COG2885@2|Bacteria,4NEND@976|Bacteroidetes,47MW3@768503|Cytophagia	976|Bacteroidetes	M	Belongs to the ompA family	-	-	-	-	-	-	-	-	-	-	-	-	CarboxypepD_reg,OmpA,PD40,RicinB_lectin_2
BYD3_k127_271603_3	1237149.C900_03863	3.733e-85	287.0	COG3279@1|root,COG3279@2|Bacteria,4NIJQ@976|Bacteroidetes,47XE0@768503|Cytophagia	976|Bacteroidetes	K	LytTr DNA-binding domain	-	-	-	-	-	-	-	-	-	-	-	-	LytTR,Response_reg
BYD3_k127_271603_2	1237149.C900_03864	5.404e-102	342.0	COG2972@1|root,COG2972@2|Bacteria,4NH1Q@976|Bacteroidetes,47PMI@768503|Cytophagia	976|Bacteroidetes	T	Histidine kinase	-	-	-	-	-	-	-	-	-	-	-	-	His_kinase
BYD3_k127_271603_0	1237149.C900_01975	6.756e-152	489.0	COG0405@1|root,COG0405@2|Bacteria,4NF2H@976|Bacteroidetes,47KUQ@768503|Cytophagia	976|Bacteroidetes	E	PFAM Gamma-glutamyltranspeptidase	ggt	-	2.3.2.2,3.4.19.13	ko:K00681	ko00430,ko00460,ko00480,ko01100,map00430,map00460,map00480,map01100	-	R00494,R01262,R01687,R03867,R03916,R03970,R03971,R04935	RC00064,RC00090,RC00096	ko00000,ko00001,ko01000,ko01002	-	-	-	G_glu_transpept
BYD3_k127_2725924_0	1237149.C900_00082	1.216e-89	302.0	COG2204@1|root,COG2204@2|Bacteria,4NE89@976|Bacteroidetes,47JF9@768503|Cytophagia	976|Bacteroidetes	T	two component, sigma54 specific, transcriptional regulator, Fis family	-	-	-	-	-	-	-	-	-	-	-	-	HTH_8,Response_reg,Sigma54_activat
BYD3_k127_2725924_1	1122176.KB903534_gene2195	2.168e-73	264.0	COG5000@1|root,COG5000@2|Bacteria,4NEWF@976|Bacteroidetes,1IPUP@117747|Sphingobacteriia	976|Bacteroidetes	T	Histidine kinase	-	-	-	-	-	-	-	-	-	-	-	-	HATPase_c,PAS_8
BYD3_k127_2725924_3	543728.Vapar_3548	6.715e-26	111.0	COG2346@1|root,COG2346@2|Bacteria,1N005@1224|Proteobacteria,2VUH2@28216|Betaproteobacteria,4AF58@80864|Comamonadaceae	28216|Betaproteobacteria	S	Bacterial-like globin	-	-	-	ko:K06886	-	-	-	-	ko00000	-	-	-	Bac_globin
BYD3_k127_2725924_2	1123248.KB893321_gene480	7.887e-33	141.0	COG0577@1|root,COG0577@2|Bacteria,4NDUK@976|Bacteroidetes,1IW4Z@117747|Sphingobacteriia	976|Bacteroidetes	V	MacB-like periplasmic core domain	-	-	-	ko:K02004	-	M00258	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	FtsX,MacB_PCD
BYD3_k127_2736889_6	111780.Sta7437_0975	3.004e-28	115.0	COG4095@1|root,COG4095@2|Bacteria,1G9AI@1117|Cyanobacteria,3VKJM@52604|Pleurocapsales	1117|Cyanobacteria	S	PFAM PQ loop repeat	-	-	-	ko:K15383	-	-	-	-	ko00000,ko02000	9.A.58.2	-	-	MtN3_slv,PQ-loop
BYD3_k127_2736889_7	29486.NJ56_05255	6.401e-17	85.0	COG0454@1|root,COG0456@2|Bacteria,1MYKM@1224|Proteobacteria,1S8EJ@1236|Gammaproteobacteria	1236|Gammaproteobacteria	K	N-acetyltransferase	phnO	-	-	ko:K09994	ko00440,map00440	-	R11479	RC00096	ko00000,ko00001,ko01000	-	-	-	Acetyltransf_1,Acetyltransf_10
BYD3_k127_2736889_0	700598.Niako_5315	8.919e-187	596.0	COG1167@1|root,COG1167@2|Bacteria,4NGKQ@976|Bacteroidetes,1IPKF@117747|Sphingobacteriia	976|Bacteroidetes	K	Transcriptional regulator	-	-	-	-	-	-	-	-	-	-	-	-	Aminotran_1_2,GntR
BYD3_k127_2736889_4	153721.MYP_2732	3.36e-80	272.0	COG2197@1|root,COG2197@2|Bacteria,4NKX7@976|Bacteroidetes,47QZF@768503|Cytophagia	976|Bacteroidetes	K	helix_turn_helix, Lux Regulon	-	-	-	-	-	-	-	-	-	-	-	-	GerE,Response_reg
BYD3_k127_2736889_3	153721.MYP_2731	3.274e-138	460.0	COG4585@1|root,COG4585@2|Bacteria,4NJN6@976|Bacteroidetes,47PJ6@768503|Cytophagia	976|Bacteroidetes	T	Histidine kinase	-	-	-	-	-	-	-	-	-	-	-	-	HATPase_c,HisKA_3
BYD3_k127_2736889_1	926549.KI421517_gene1242	2.639e-163	517.0	COG1741@1|root,COG1741@2|Bacteria,4NEV6@976|Bacteroidetes,47JT8@768503|Cytophagia	976|Bacteroidetes	S	Belongs to the pirin family	-	-	-	ko:K06911	-	-	-	-	ko00000	-	-	-	Pirin,Pirin_C
BYD3_k127_2736889_2	1506583.JQJY01000001_gene663	3.947e-149	482.0	28IAE@1|root,2Z8D0@2|Bacteria,4NFWC@976|Bacteroidetes,1I0D2@117743|Flavobacteriia,2NTN6@237|Flavobacterium	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_2736889_5	3075.A0A087SD08	1.665e-29	123.0	2B5H6@1|root,2S0J1@2759|Eukaryota,381MC@33090|Viridiplantae,34MX0@3041|Chlorophyta	3041|Chlorophyta	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_2743681_6	1237149.C900_02382	9.325e-20	89.0	COG0784@1|root,COG0784@2|Bacteria,4NRC9@976|Bacteroidetes,47QC7@768503|Cytophagia	976|Bacteroidetes	T	cheY-homologous receiver domain	-	-	-	-	-	-	-	-	-	-	-	-	Response_reg
BYD3_k127_2743681_1	1237149.C900_02381	2.905e-260	809.0	COG1012@1|root,COG1012@2|Bacteria,4NFPJ@976|Bacteroidetes,47JJR@768503|Cytophagia	976|Bacteroidetes	C	Belongs to the aldehyde dehydrogenase family	pcd	-	1.2.1.3	ko:K00128	ko00010,ko00053,ko00071,ko00280,ko00310,ko00330,ko00340,ko00380,ko00410,ko00561,ko00620,ko00625,ko00903,ko00981,ko01100,ko01110,ko01120,ko01130,map00010,map00053,map00071,map00280,map00310,map00330,map00340,map00380,map00410,map00561,map00620,map00625,map00903,map00981,map01100,map01110,map01120,map01130	M00135	R00264,R00631,R00710,R00904,R01752,R01986,R02549,R02678,R02940,R02957,R03283,R03869,R04065,R04506,R04903,R05050,R05237,R05238,R05286,R06366,R08146	RC00047,RC00071,RC00080,RC00186,RC00218,RC00242,RC00816,RC01500	ko00000,ko00001,ko00002,ko01000	-	-	-	Aldedh
BYD3_k127_2743681_3	1237149.C900_02380	2.765e-167	539.0	COG0265@1|root,COG0265@2|Bacteria,4NFCS@976|Bacteroidetes,47KF5@768503|Cytophagia	976|Bacteroidetes	O	PDZ domain (Also known as DHR or GLGF)	htrA	-	-	-	-	-	-	-	-	-	-	-	PDZ_1,PDZ_2,Trypsin_2
BYD3_k127_2743681_2	471854.Dfer_1982	1.748e-174	555.0	COG0477@1|root,COG2814@2|Bacteria,4NG6X@976|Bacteroidetes,47KCB@768503|Cytophagia	976|Bacteroidetes	EGP	TIGRFAM Drug resistance transporter Bcr CflA subfamily	bcr	-	-	ko:K03446,ko:K07552	-	M00701	-	-	ko00000,ko00002,ko02000	2.A.1.2,2.A.1.3	-	-	MFS_1
BYD3_k127_2743681_5	1120965.AUBV01000006_gene2220	1.076e-40	155.0	COG0071@1|root,COG0071@2|Bacteria,4NSJB@976|Bacteroidetes,47R4W@768503|Cytophagia	976|Bacteroidetes	O	Belongs to the small heat shock protein (HSP20) family	-	-	-	ko:K13993	ko04141,map04141	-	-	-	ko00000,ko00001,ko03110	-	-	-	HSP20
BYD3_k127_2743681_0	1122599.AUGR01000019_gene3071	6.465e-287	904.0	COG1404@1|root,COG4935@1|root,COG1404@2|Bacteria,COG4935@2|Bacteria	2|Bacteria	O	Belongs to the peptidase S8 family	prcA	-	3.4.21.121	ko:K20755	-	-	-	-	ko00000,ko01000,ko01002	-	-	-	FTP,P_proprotein,PepSY,Peptidase_M4,Peptidase_M4_C,Peptidase_S8
BYD3_k127_2743681_4	1279009.ADICEAN_03419	1.065e-140	457.0	COG1404@1|root,COG1404@2|Bacteria,4NI53@976|Bacteroidetes,47MBD@768503|Cytophagia	976|Bacteroidetes	O	Peptidase S8	-	-	-	-	-	-	-	-	-	-	-	-	Inhibitor_I9,Peptidase_S8
BYD3_k127_2743681_7	1121373.KB903620_gene2012	1.499e-18	89.0	COG2827@1|root,COG2827@2|Bacteria,4NUKY@976|Bacteroidetes,47R41@768503|Cytophagia	976|Bacteroidetes	L	GIY-YIG catalytic domain	-	-	-	ko:K07461	-	-	-	-	ko00000	-	-	-	GIY-YIG
BYD3_k127_2748771_5	531844.FIC_01050	7.467e-59	205.0	COG0823@1|root,COG1506@1|root,COG0823@2|Bacteria,COG1506@2|Bacteria,4NFBK@976|Bacteroidetes,1HY8A@117743|Flavobacteriia	976|Bacteroidetes	EU	peptidase S9	-	-	-	-	-	-	-	-	-	-	-	-	PD40,Peptidase_S9,Peptidase_S9_N
BYD3_k127_2748771_7	1237149.C900_00011	8.619e-31	129.0	COG3637@1|root,COG3637@2|Bacteria,4NR9K@976|Bacteroidetes,47QK5@768503|Cytophagia	976|Bacteroidetes	M	Outer membrane protein beta-barrel domain	-	-	-	-	-	-	-	-	-	-	-	-	OMP_b-brl,OMP_b-brl_2
BYD3_k127_2748771_8	929562.Emtol_3322	4.564e-25	118.0	28I8D@1|root,2ZBHJ@2|Bacteria,4NHI9@976|Bacteroidetes,47KUP@768503|Cytophagia	976|Bacteroidetes	S	Domain of unknown function (DUF4249)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4249
BYD3_k127_2748771_4	555500.I215_02068	2.418e-79	267.0	COG0229@1|root,COG0229@2|Bacteria,4NP9M@976|Bacteroidetes,1I1W9@117743|Flavobacteriia	976|Bacteroidetes	O	Peptide-methionine (R)-S-oxide reductase	-	-	1.8.4.12	ko:K07305	-	-	-	-	ko00000,ko01000	-	-	-	SelR
BYD3_k127_2748771_3	1185876.BN8_02295	1.114e-97	323.0	COG0702@1|root,COG0702@2|Bacteria,4NGMR@976|Bacteroidetes,47NYS@768503|Cytophagia	976|Bacteroidetes	GM	epimerase	-	-	-	-	-	-	-	-	-	-	-	-	Epimerase
BYD3_k127_2748771_6	1123277.KB893185_gene2962	6.228e-32	135.0	COG0589@1|root,COG0589@2|Bacteria,4NHBB@976|Bacteroidetes,47RX5@768503|Cytophagia	976|Bacteroidetes	T	Universal stress protein family	-	-	-	-	-	-	-	-	-	-	-	-	Usp
BYD3_k127_2748771_2	1185876.BN8_05055	2e-101	339.0	COG3705@1|root,COG3705@2|Bacteria,4NPDC@976|Bacteroidetes,47QQG@768503|Cytophagia	976|Bacteroidetes	E	Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_2748771_9	1123248.KB893338_gene2307	3.871e-12	69.0	COG0577@1|root,COG0577@2|Bacteria,4NDUK@976|Bacteroidetes,1INSB@117747|Sphingobacteriia	976|Bacteroidetes	V	TIGRFAM Acidobacterial duplicated orphan permease	-	-	-	ko:K02004	-	M00258	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	FtsX,MacB_PCD
BYD3_k127_2748771_1	1239962.C943_01333	1.41e-127	417.0	COG0673@1|root,COG0673@2|Bacteria,4NHFK@976|Bacteroidetes,47MBN@768503|Cytophagia	976|Bacteroidetes	S	Oxidoreductase family, NAD-binding Rossmann fold	-	-	-	-	-	-	-	-	-	-	-	-	GFO_IDH_MocA
BYD3_k127_2748771_0	1120965.AUBV01000007_gene2630	5.782e-202	637.0	COG0673@1|root,COG0673@2|Bacteria,4NF96@976|Bacteroidetes,47THD@768503|Cytophagia	976|Bacteroidetes	S	Oxidoreductase family, NAD-binding Rossmann fold	-	-	-	-	-	-	-	-	-	-	-	-	GFO_IDH_MocA,GFO_IDH_MocA_C
BYD3_k127_2752844_2	313596.RB2501_04510	3.67e-06	61.0	2BTQM@1|root,32NXS@2|Bacteria,4PFK3@976|Bacteroidetes,1I7AQ@117743|Flavobacteriia	976|Bacteroidetes	S	TIR domain	-	-	-	-	-	-	-	-	-	-	-	-	TIR_2
BYD3_k127_2752844_0	1123057.P872_08630	2.233e-125	434.0	COG0457@1|root,COG2114@1|root,COG5616@1|root,COG0457@2|Bacteria,COG2114@2|Bacteria,COG5616@2|Bacteria,4NFW7@976|Bacteroidetes,47QEI@768503|Cytophagia	976|Bacteroidetes	K	COGs COG5616 integral membrane protein	-	-	-	-	-	-	-	-	-	-	-	-	Guanylate_cyc,TPR_17,TPR_8
BYD3_k127_2752844_1	388413.ALPR1_13625	6.317e-46	176.0	COG1404@1|root,COG1404@2|Bacteria,4NI53@976|Bacteroidetes,47MBD@768503|Cytophagia	976|Bacteroidetes	O	Peptidase S8	-	-	3.4.21.62	ko:K01342	ko02024,map02024	-	-	-	ko00000,ko00001,ko01000,ko01002,ko03110	-	-	-	Inhibitor_I9,Peptidase_S8
BYD3_k127_2754576_4	485918.Cpin_1595	0.0008264	43.0	COG2067@1|root,COG2067@2|Bacteria,4NG1B@976|Bacteroidetes,1IWK5@117747|Sphingobacteriia	976|Bacteroidetes	I	Protein of unknown function (DUF3570)	-	-	-	-	-	-	-	-	-	-	-	-	DUF3570
BYD3_k127_2754576_2	864051.BurJ1DRAFT_4748	1.045e-09	67.0	COG0457@1|root,COG0457@2|Bacteria,1R48M@1224|Proteobacteria,2VJUM@28216|Betaproteobacteria,1KN3B@119065|unclassified Burkholderiales	28216|Betaproteobacteria	S	Tetratricopeptide repeat	-	-	-	-	-	-	-	-	-	-	-	-	DUF4071,TPR_19
BYD3_k127_2754576_3	746697.Aeqsu_2760	7.621e-07	62.0	2BTQM@1|root,32NXS@2|Bacteria,4PFK3@976|Bacteroidetes,1I7AQ@117743|Flavobacteriia	976|Bacteroidetes	S	TIR domain	-	-	-	-	-	-	-	-	-	-	-	-	TIR_2
BYD3_k127_2754576_0	746697.Aeqsu_2761	3.381e-67	262.0	COG1674@1|root,COG1674@2|Bacteria,4PMA8@976|Bacteroidetes,1I6B6@117743|Flavobacteriia	976|Bacteroidetes	D	ftsk spoiiie	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_2754576_1	240292.Ava_3079	1.247e-12	70.0	COG2319@1|root,COG4249@1|root,COG2319@2|Bacteria,COG4249@2|Bacteria,1FZVW@1117|Cyanobacteria,1HJQG@1161|Nostocales	1117|Cyanobacteria	U	WD domain, G-beta repeat	-	-	-	-	-	-	-	-	-	-	-	-	Peptidase_C14,WD40
BYD3_k127_2759650_5	1237149.C900_02861	2.509e-105	345.0	COG1807@1|root,COG1807@2|Bacteria,4PKJX@976|Bacteroidetes,47KCA@768503|Cytophagia	976|Bacteroidetes	M	Protein of unknown function (DUF2723)	-	-	-	-	-	-	-	-	-	-	-	-	DUF2723
BYD3_k127_2759650_2	1237149.C900_02861	4.942e-233	736.0	COG1807@1|root,COG1807@2|Bacteria,4PKJX@976|Bacteroidetes,47KCA@768503|Cytophagia	976|Bacteroidetes	M	Protein of unknown function (DUF2723)	-	-	-	-	-	-	-	-	-	-	-	-	DUF2723
BYD3_k127_2759650_1	1237149.C900_00490	5.494e-242	754.0	COG1249@1|root,COG1249@2|Bacteria,4NDVC@976|Bacteroidetes,47JS2@768503|Cytophagia	976|Bacteroidetes	C	dihydrolipoamide dehydrogenase	lpdA	-	1.8.1.4	ko:K00382	ko00010,ko00020,ko00260,ko00280,ko00620,ko00630,ko00640,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00020,map00260,map00280,map00620,map00630,map00640,map01100,map01110,map01120,map01130,map01200	M00009,M00011,M00036,M00307,M00532	R00209,R01221,R01698,R03815,R07618,R08549	RC00004,RC00022,RC00583,RC02742,RC02833,RC02834	br01601,ko00000,ko00001,ko00002,ko01000,ko04147	-	-	-	Pyr_redox_2,Pyr_redox_dim
BYD3_k127_2759650_4	1237149.C900_00485	1.12e-129	417.0	COG1028@1|root,COG1028@2|Bacteria,4NEAI@976|Bacteroidetes,47MF7@768503|Cytophagia	976|Bacteroidetes	IQ	TIGRFAM 3-oxoacyl-(acyl-carrier-protein) reductase	fabG	-	1.1.1.100	ko:K00059	ko00061,ko00333,ko00780,ko01040,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01040,map01100,map01130,map01212	M00083,M00572	R04533,R04534,R04536,R04543,R04566,R04953,R04964,R07759,R07763,R10116,R10120,R11671	RC00029,RC00117	ko00000,ko00001,ko00002,ko01000,ko01004	-	-	-	adh_short_C2
BYD3_k127_2759650_7	760192.Halhy_4272	7.901e-33	132.0	COG2318@1|root,COG2318@2|Bacteria,4NRAP@976|Bacteroidetes,1IUMH@117747|Sphingobacteriia	976|Bacteroidetes	S	DinB superfamily	-	-	-	-	-	-	-	-	-	-	-	-	DinB_2
BYD3_k127_2759650_0	1279009.ADICEAN_00481	2.222e-242	753.0	COG2873@1|root,COG2873@2|Bacteria,4NE27@976|Bacteroidetes,47M8Z@768503|Cytophagia	976|Bacteroidetes	E	PFAM Cys Met metabolism PLP-dependent enzyme	metY	-	2.5.1.49	ko:K01740	ko00270,ko01100,map00270,map01100	-	R01287,R04859	RC00020,RC02821,RC02848	ko00000,ko00001,ko01000	-	-	-	Cys_Met_Meta_PP
BYD3_k127_2759650_3	1089547.KB913013_gene3855	1.401e-139	451.0	COG2021@1|root,COG2021@2|Bacteria,4NFG2@976|Bacteroidetes,47KMZ@768503|Cytophagia	976|Bacteroidetes	E	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine	metXA	-	2.3.1.31	ko:K00641	ko00270,ko01100,ko01130,map00270,map01100,map01130	-	R01776	RC00004,RC00041	ko00000,ko00001,ko01000	-	-	-	Abhydrolase_1
BYD3_k127_2759650_6	929556.Solca_2248	6.603e-96	319.0	COG0460@1|root,COG0460@2|Bacteria,4NHRC@976|Bacteroidetes,1IPM4@117747|Sphingobacteriia	976|Bacteroidetes	E	homoserine dehydrogenase	hom	-	1.1.1.3	ko:K00003	ko00260,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00260,map00270,map00300,map01100,map01110,map01120,map01130,map01230	M00017,M00018	R01773,R01775	RC00087	ko00000,ko00001,ko00002,ko01000	-	-	-	Homoserine_dh,NAD_binding_3
BYD3_k127_277150_1	1237149.C900_01151	4.622e-146	470.0	COG0247@1|root,COG0277@1|root,COG0247@2|Bacteria,COG0277@2|Bacteria,4NEK3@976|Bacteroidetes,47JNC@768503|Cytophagia	976|Bacteroidetes	C	FAD linked oxidases, C-terminal domain	-	-	-	-	-	-	-	-	-	-	-	-	FAD-oxidase_C,FAD_binding_4,Fer4_17,Fer4_8
BYD3_k127_277150_0	1121930.AQXG01000008_gene209	3.44e-174	574.0	COG0577@1|root,COG0577@2|Bacteria,4NDUK@976|Bacteroidetes	976|Bacteroidetes	V	permease	-	-	-	-	-	-	-	-	-	-	-	-	FtsX,MacB_PCD
BYD3_k127_277150_2	761193.Runsl_1980	3.672e-34	138.0	2AB14@1|root,310ER@2|Bacteria,4NNNB@976|Bacteroidetes,47Q4B@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_277150_4	1443125.Z962_03570	0.0001545	47.0	COG0784@1|root,COG4191@1|root,COG5002@1|root,COG0784@2|Bacteria,COG4191@2|Bacteria,COG5002@2|Bacteria,1UYQH@1239|Firmicutes,249I4@186801|Clostridia,36GPP@31979|Clostridiaceae	186801|Clostridia	T	Histidine kinase	-	-	-	-	-	-	-	-	-	-	-	-	HATPase_c,HisKA,Response_reg,dCache_1,sCache_2
BYD3_k127_2775809_3	1107311.Q767_14675	1.123e-37	146.0	COG0702@1|root,COG0702@2|Bacteria,4NMI5@976|Bacteroidetes,1IJ1D@117743|Flavobacteriia	976|Bacteroidetes	GM	NmrA-like family	-	-	-	-	-	-	-	-	-	-	-	-	NAD_binding_10
BYD3_k127_2775809_5	525373.HMPREF0766_12624	2.258e-35	138.0	COG1145@1|root,32SB1@2|Bacteria,4NQ8P@976|Bacteroidetes,1ITD6@117747|Sphingobacteriia	976|Bacteroidetes	C	Domain of Unknown Function (DUF326)	-	-	-	-	-	-	-	-	-	-	-	-	DUF326
BYD3_k127_2775809_6	1250005.PHEL85_1338	3.992e-33	134.0	COG0071@1|root,COG0071@2|Bacteria,4NQXY@976|Bacteroidetes,1I23H@117743|Flavobacteriia,3VX8Y@52959|Polaribacter	976|Bacteroidetes	O	Hsp20/alpha crystallin family	-	-	-	ko:K13993	ko04141,map04141	-	-	-	ko00000,ko00001,ko03110	-	-	-	HSP20
BYD3_k127_2775809_2	1178825.ALIH01000019_gene1232	4.24e-44	165.0	2DM52@1|root,32UG7@2|Bacteria,4NSYJ@976|Bacteroidetes,1I4AH@117743|Flavobacteriia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	Lipocalin_4
BYD3_k127_2775809_4	1270196.JCKI01000004_gene1143	1.472e-36	140.0	COG3118@1|root,COG3118@2|Bacteria,4NS6N@976|Bacteroidetes,1J0R1@117747|Sphingobacteriia	976|Bacteroidetes	O	Thioredoxin-like domain	-	-	-	ko:K03671	ko04621,ko05418,map04621,map05418	-	-	-	ko00000,ko00001,ko03110	-	-	-	Thioredoxin
BYD3_k127_2775809_1	504472.Slin_0947	6.519e-128	438.0	COG0577@1|root,COG0577@2|Bacteria,4NDUK@976|Bacteroidetes,47NWV@768503|Cytophagia	976|Bacteroidetes	V	MacB-like periplasmic core domain	-	-	-	ko:K02004	-	M00258	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	FtsX,MacB_PCD
BYD3_k127_2775809_0	1121904.ARBP01000002_gene6867	4.678e-168	536.0	2DBYN@1|root,2ZBWH@2|Bacteria,4NIPQ@976|Bacteroidetes	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_2775809_7	760192.Halhy_6466	8.061e-14	76.0	COG3795@1|root,COG3795@2|Bacteria,4NS2I@976|Bacteroidetes,1ITPC@117747|Sphingobacteriia	976|Bacteroidetes	S	PFAM YCII-related domain	-	-	-	-	-	-	-	-	-	-	-	-	YCII
BYD3_k127_2782761_1	929562.Emtol_0720	1.237e-131	428.0	COG2010@1|root,COG2010@2|Bacteria,4NFP6@976|Bacteroidetes,47JRP@768503|Cytophagia	976|Bacteroidetes	C	Protein of unknown function (DUF1549)	-	-	-	-	-	-	-	-	-	-	-	-	CBM_6,PSCyt1,PSCyt2,PSD1
BYD3_k127_2782761_5	1131730.BAVI_00750	2.622e-35	136.0	COG3708@1|root,COG3708@2|Bacteria,1VJT1@1239|Firmicutes,4HREN@91061|Bacilli,1ZRAV@1386|Bacillus	91061|Bacilli	K	Putative zinc ribbon domain	-	-	-	-	-	-	-	-	-	-	-	-	Zn_ribbon_2
BYD3_k127_2782761_0	525373.HMPREF0766_13832	9.29e-246	767.0	COG3119@1|root,COG3119@2|Bacteria,4NGVK@976|Bacteroidetes,1J0S3@117747|Sphingobacteriia	976|Bacteroidetes	P	Protein of unknown function (DUF1501)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1501
BYD3_k127_2782761_2	929703.KE386491_gene3904	6.977e-118	386.0	COG1082@1|root,COG1082@2|Bacteria,4NFEA@976|Bacteroidetes,47K3N@768503|Cytophagia	976|Bacteroidetes	G	Xylose isomerase domain protein TIM barrel	-	-	-	-	-	-	-	-	-	-	-	-	AP_endonuc_2
BYD3_k127_2782761_3	760192.Halhy_0300	2.276e-101	346.0	COG4244@1|root,COG4886@1|root,COG4244@2|Bacteria,COG4886@2|Bacteria,4NFES@976|Bacteroidetes,1IPVN@117747|Sphingobacteriia	976|Bacteroidetes	S	Planctomycete cytochrome C	-	-	-	-	-	-	-	-	-	-	-	-	LRR_8,PSCyt1
BYD3_k127_2782761_4	926549.KI421517_gene3689	2.381e-42	158.0	COG0398@1|root,COG0398@2|Bacteria,4NIT2@976|Bacteroidetes,47KFE@768503|Cytophagia	976|Bacteroidetes	S	Protein of unknown function, DUF547	-	-	-	-	-	-	-	-	-	-	-	-	DUF547
BYD3_k127_2799877_5	672.VV93_v1c27040	3.812e-127	409.0	COG0166@1|root,COG0166@2|Bacteria,1MUFP@1224|Proteobacteria,1RNIT@1236|Gammaproteobacteria,1XT97@135623|Vibrionales	135623|Vibrionales	G	Belongs to the GPI family	pgi	GO:0003674,GO:0003824,GO:0004347,GO:0005975,GO:0006082,GO:0006090,GO:0006091,GO:0006096,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0016052,GO:0016053,GO:0016310,GO:0016853,GO:0016860,GO:0016861,GO:0017144,GO:0018130,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0019752,GO:0032787,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042866,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0046031,GO:0046034,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046700,GO:0046939,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0090407,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576	5.3.1.9	ko:K01810	ko00010,ko00030,ko00500,ko00520,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00030,map00500,map00520,map01100,map01110,map01120,map01130,map01200	M00001,M00004,M00114	R02739,R02740,R03321	RC00376,RC00563	ko00000,ko00001,ko00002,ko01000,ko04147	-	-	-	PGI
BYD3_k127_2799877_3	1237149.C900_00616	1.312e-153	490.0	COG0205@1|root,COG0205@2|Bacteria,4NF8F@976|Bacteroidetes,47M49@768503|Cytophagia	976|Bacteroidetes	G	Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis	pfkA	-	2.7.1.11	ko:K00850	ko00010,ko00030,ko00051,ko00052,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko03018,ko04152,ko05230,map00010,map00030,map00051,map00052,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map03018,map04152,map05230	M00001,M00345	R00756,R03236,R03237,R03238,R03239,R04779	RC00002,RC00017	ko00000,ko00001,ko00002,ko01000,ko01009,ko03019	-	-	-	PFK
BYD3_k127_2799877_4	1237149.C900_00618	3.099e-139	449.0	COG1940@1|root,COG1940@2|Bacteria,4NFZ1@976|Bacteroidetes,47PAF@768503|Cytophagia	976|Bacteroidetes	G	ROK family	glk	-	2.7.1.2	ko:K00845	ko00010,ko00052,ko00500,ko00520,ko00521,ko00524,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00052,map00500,map00520,map00521,map00524,map01100,map01110,map01120,map01130,map01200	M00001,M00549	R00299,R01600,R01786	RC00002,RC00017	ko00000,ko00001,ko00002,ko01000	-	-	-	ROK
BYD3_k127_2799877_6	1237149.C900_04906	5.975e-37	141.0	2AFHA@1|root,315HT@2|Bacteria,4NQ5F@976|Bacteroidetes,47VEE@768503|Cytophagia	976|Bacteroidetes	S	23S rRNA-intervening sequence protein	-	-	-	-	-	-	-	-	-	-	-	-	23S_rRNA_IVP
BYD3_k127_2799877_2	760192.Halhy_4486	7.101e-287	901.0	COG1449@1|root,COG1449@2|Bacteria,4NFKK@976|Bacteroidetes	976|Bacteroidetes	G	Belongs to the glycosyl hydrolase 57 family	-	-	-	-	-	-	-	-	-	-	-	-	DUF3536,Glyco_hydro_57
BYD3_k127_2799877_1	760192.Halhy_2286	3.083e-300	933.0	COG0296@1|root,COG0296@2|Bacteria,4NECZ@976|Bacteroidetes,1IQIR@117747|Sphingobacteriia	976|Bacteroidetes	G	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position	glgB	-	2.4.1.18	ko:K00700	ko00500,ko01100,ko01110,map00500,map01100,map01110	M00565	R02110	-	ko00000,ko00001,ko00002,ko01000,ko04147	-	CBM48,GH13	-	Alpha-amylase,Alpha-amylase_C,CBM_48
BYD3_k127_2799877_0	1237149.C900_02046	1.804e-307	966.0	COG0366@1|root,COG3281@1|root,COG0366@2|Bacteria,COG3281@2|Bacteria,4NFE4@976|Bacteroidetes,47Y5G@768503|Cytophagia	976|Bacteroidetes	G	Maltogenic Amylase, C-terminal domain	-	-	3.2.1.1,5.4.99.16	ko:K05343	ko00500,ko01100,map00500,map01100	-	R01557,R02108,R02112,R11262	RC01816	ko00000,ko00001,ko01000	-	GH13	-	Alpha-amylase,Malt_amylase_C
BYD3_k127_2809355_0	1237149.C900_02063	1.967e-186	601.0	COG2203@1|root,COG2203@2|Bacteria,4NE84@976|Bacteroidetes,47K2E@768503|Cytophagia	976|Bacteroidetes	T	Gaf domain	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_2809355_2	504472.Slin_3605	2.177e-60	216.0	2A087@1|root,30NBF@2|Bacteria,4NMD0@976|Bacteroidetes,47P70@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_2809355_3	448385.sce8962	1.176e-20	94.0	2ECF7@1|root,336DF@2|Bacteria,1NWPM@1224|Proteobacteria,432XS@68525|delta/epsilon subdivisions,2WY0M@28221|Deltaproteobacteria	28221|Deltaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_2809355_5	448385.sce8962	0.0006651	43.0	2ECF7@1|root,336DF@2|Bacteria,1NWPM@1224|Proteobacteria,432XS@68525|delta/epsilon subdivisions,2WY0M@28221|Deltaproteobacteria	28221|Deltaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_2809355_1	1279009.ADICEAN_01301	4.46e-135	456.0	COG1629@1|root,COG4771@2|Bacteria,4NJX5@976|Bacteroidetes,47TS2@768503|Cytophagia	976|Bacteroidetes	P	TonB dependent receptor	-	-	-	ko:K02014	-	-	-	-	ko00000,ko02000	1.B.14	-	-	Plug,TonB_dep_Rec
BYD3_k127_2809355_4	1124780.ANNU01000002_gene1576	3.615e-13	72.0	COG3850@1|root,COG3850@2|Bacteria,4NHQZ@976|Bacteroidetes,47PHP@768503|Cytophagia	976|Bacteroidetes	T	Domain present in phytochromes and cGMP-specific phosphodiesterases.	-	-	-	-	-	-	-	-	-	-	-	-	GAF_2,PAS_4
BYD3_k127_2819619_2	485918.Cpin_7175	7.58e-164	522.0	COG0389@1|root,COG0389@2|Bacteria,4NF1Y@976|Bacteroidetes,1IP49@117747|Sphingobacteriia	976|Bacteroidetes	L	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII	dinB	-	2.7.7.7	ko:K02346	-	-	-	-	ko00000,ko01000,ko03400	-	-	-	IMS,IMS_C,IMS_HHH
BYD3_k127_2819619_5	1185876.BN8_00817	2.275e-12	77.0	2E25C@1|root,32XC8@2|Bacteria,4NTJ4@976|Bacteroidetes,47QKP@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_2819619_1	388413.ALPR1_19928	1.228e-213	674.0	COG0673@1|root,COG0673@2|Bacteria,4NEN5@976|Bacteroidetes,47JNX@768503|Cytophagia	976|Bacteroidetes	S	PFAM Oxidoreductase family, NAD-binding Rossmann fold	-	-	-	-	-	-	-	-	-	-	-	-	GFO_IDH_MocA
BYD3_k127_2819619_0	1461580.CCAS010000075_gene4169	6.468e-280	877.0	28JDZ@1|root,2Z988@2|Bacteria,1VVCW@1239|Firmicutes	1239|Firmicutes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_2819619_4	1121007.AUML01000031_gene2708	1.964e-21	100.0	COG4430@1|root,COG4430@2|Bacteria,4NNT1@976|Bacteroidetes,1I3HQ@117743|Flavobacteriia	976|Bacteroidetes	S	Domain of unknown function (DUF1905)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1905,OmdA
BYD3_k127_2819619_3	1185876.BN8_01714	2.803e-90	299.0	COG1387@1|root,COG1387@2|Bacteria,4NMBC@976|Bacteroidetes,47PG3@768503|Cytophagia	976|Bacteroidetes	E	Domain of Unknown Function (DUF1080)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1080
BYD3_k127_2827380_2	760192.Halhy_3879	1.602e-51	189.0	COG0228@1|root,COG0228@2|Bacteria,4NNY8@976|Bacteroidetes,1IRXR@117747|Sphingobacteriia	976|Bacteroidetes	J	Belongs to the bacterial ribosomal protein bS16 family	rpsP	GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904	-	ko:K02959	ko03010,map03010	M00178	-	-	br01610,ko00000,ko00001,ko00002,ko03011,ko03029	-	-	-	Ribosomal_S16
BYD3_k127_2827380_4	760192.Halhy_4470	4.53e-05	55.0	COG3087@1|root,COG3087@2|Bacteria	2|Bacteria	D	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides	-	-	2.7.7.7,5.4.99.21	ko:K02343,ko:K06182,ko:K08372,ko:K12065,ko:K16291	ko00230,ko00240,ko01100,ko02020,ko03030,ko03430,ko03440,map00230,map00240,map01100,map02020,map03030,map03430,map03440	M00260	R00375,R00376,R00377,R00378	RC02795	ko00000,ko00001,ko00002,ko01000,ko01002,ko01011,ko02044,ko03009,ko03032,ko03400	3.A.7.11.1	-	-	Gram_pos_anchor,NYN,SPOR
BYD3_k127_2827380_0	760192.Halhy_4530	5.633e-196	624.0	COG2509@1|root,COG2509@2|Bacteria,4NEUQ@976|Bacteroidetes,1IQIE@117747|Sphingobacteriia	976|Bacteroidetes	S	FAD-dependent dehydrogenase	-	-	-	ko:K07137	-	-	-	-	ko00000	-	-	-	FAD_binding_2,FAD_binding_3,GIDA,HI0933_like,Pyr_redox_2
BYD3_k127_2827380_3	1122176.KB903531_gene3106	1.653e-41	156.0	COG2259@1|root,COG2259@2|Bacteria,4NYPC@976|Bacteroidetes,1IZT9@117747|Sphingobacteriia	976|Bacteroidetes	S	SURF4 family	-	-	-	ko:K15977	-	-	-	-	ko00000	-	-	-	DoxX,SURF4
BYD3_k127_2832654_5	1131812.JQMS01000001_gene2865	2.573e-64	224.0	COG3832@1|root,COG3832@2|Bacteria,4NFVK@976|Bacteroidetes,1I2NR@117743|Flavobacteriia,2NVJM@237|Flavobacterium	976|Bacteroidetes	S	Activator of Hsp90 ATPase	-	-	-	-	-	-	-	-	-	-	-	-	3-dmu-9_3-mt,AHSA1
BYD3_k127_2832654_9	1185876.BN8_04298	4.495e-44	164.0	COG0640@1|root,COG0640@2|Bacteria,4NQCU@976|Bacteroidetes,47QH4@768503|Cytophagia	976|Bacteroidetes	K	helix_turn_helix, Arsenical Resistance Operon Repressor	-	-	-	-	-	-	-	-	-	-	-	-	HTH_20,HTH_5
BYD3_k127_2832654_6	1336243.JAEA01000005_gene1559	7.156e-59	223.0	COG0500@1|root,COG2226@2|Bacteria,1NWX3@1224|Proteobacteria,2TURQ@28211|Alphaproteobacteria,1JX36@119045|Methylobacteriaceae	28211|Alphaproteobacteria	Q	ubiE/COQ5 methyltransferase family	-	-	-	-	-	-	-	-	-	-	-	-	Methyltransf_11,Methyltransf_25
BYD3_k127_2832654_8	700598.Niako_7091	1.124e-50	187.0	COG1309@1|root,COG1309@2|Bacteria,4NN5H@976|Bacteroidetes	976|Bacteroidetes	K	tetR family	-	-	-	ko:K16137	-	-	-	-	ko00000,ko03000	-	-	-	TetR_C_13,TetR_N
BYD3_k127_2832654_3	504472.Slin_6223	1.913e-76	259.0	COG2128@1|root,COG2128@2|Bacteria,4NH2M@976|Bacteroidetes,47PX1@768503|Cytophagia	976|Bacteroidetes	S	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity	-	-	-	-	-	-	-	-	-	-	-	-	CMD
BYD3_k127_2832654_4	1288963.ADIS_2258	2.858e-70	247.0	COG2207@1|root,COG2207@2|Bacteria,4NJ72@976|Bacteroidetes,47RSM@768503|Cytophagia	976|Bacteroidetes	K	AraC-like ligand binding domain	thiD	-	2.7.1.49,2.7.4.7	ko:K00941	ko00730,ko01100,map00730,map01100	M00127	R03471,R04509	RC00002,RC00017	ko00000,ko00001,ko00002,ko01000	-	-	-	AraC_binding,HTH_18,Phos_pyr_kin
BYD3_k127_2832654_7	1202532.FF52_06125	1.141e-53	192.0	COG2259@1|root,COG2259@2|Bacteria,4NNA7@976|Bacteroidetes,1I2Q1@117743|Flavobacteriia,2NWK8@237|Flavobacterium	976|Bacteroidetes	S	DoxX	-	-	-	-	-	-	-	-	-	-	-	-	DoxX
BYD3_k127_2832654_2	402612.FP1502	1.902e-76	264.0	COG0730@1|root,COG0730@2|Bacteria,4NKE8@976|Bacteroidetes,1II62@117743|Flavobacteriia,2NVNM@237|Flavobacterium	976|Bacteroidetes	S	Sulfite exporter TauE/SafE	-	-	-	ko:K07090	-	-	-	-	ko00000	-	-	-	TauE
BYD3_k127_2832654_1	925409.KI911562_gene1292	1.999e-101	347.0	COG1538@1|root,COG1538@2|Bacteria,4P29H@976|Bacteroidetes,1J15S@117747|Sphingobacteriia	976|Bacteroidetes	MU	Outer membrane efflux protein	-	-	-	-	-	-	-	-	-	-	-	-	OEP
BYD3_k127_2832654_0	700598.Niako_4070	1.155e-262	820.0	COG0841@1|root,COG0841@2|Bacteria	2|Bacteria	V	transmembrane transporter activity	-	-	-	-	-	-	-	-	-	-	-	-	ACR_tran
BYD3_k127_2839246_0	1237149.C900_05690	1.731e-312	972.0	COG1201@1|root,COG1201@2|Bacteria,4NGQ0@976|Bacteroidetes,47NAU@768503|Cytophagia	976|Bacteroidetes	L	DEAD DEAH box helicase	lhr	-	-	ko:K03724	-	-	-	-	ko00000,ko01000,ko03400	-	-	-	DEAD,DEAD_assoc,Helicase_C
BYD3_k127_2839246_2	1237149.C900_03623	3.7e-87	296.0	COG0789@1|root,COG0789@2|Bacteria,4NERC@976|Bacteroidetes,47K07@768503|Cytophagia	976|Bacteroidetes	K	PFAM MerR family regulatory protein	-	-	-	ko:K22491	-	-	-	-	ko00000,ko03000	-	-	-	B12-binding,B12-binding_2,MerR_1
BYD3_k127_2839246_3	742767.HMPREF9456_01374	1.537e-38	149.0	COG1595@1|root,COG1595@2|Bacteria,4NMM3@976|Bacteroidetes,2FNH5@200643|Bacteroidia,22XTV@171551|Porphyromonadaceae	976|Bacteroidetes	K	Belongs to the sigma-70 factor family. ECF subfamily	sigR_3	-	-	ko:K03088	-	-	-	-	ko00000,ko03021	-	-	-	Sigma70_r2,Sigma70_r4_2
BYD3_k127_2839246_1	1237149.C900_03621	1.119e-204	647.0	COG1233@1|root,COG1233@2|Bacteria,4NF7K@976|Bacteroidetes,47JMY@768503|Cytophagia	976|Bacteroidetes	Q	TIGRFAM phytoene desaturase	crtI	-	1.3.99.26,1.3.99.28,1.3.99.29,1.3.99.31	ko:K10027	ko00906,ko01100,ko01110,map00906,map01100,map01110	-	R04787,R04798,R04800,R09691,R09692	RC01214,RC02088,RC02605	ko00000,ko00001,ko01000	-	-	-	Amino_oxidase
BYD3_k127_2849927_6	1296416.JACB01000005_gene174	6.725e-53	193.0	COG1721@1|root,COG1721@2|Bacteria,4NFX4@976|Bacteroidetes,1HXMB@117743|Flavobacteriia,2YJ42@290174|Aquimarina	976|Bacteroidetes	S	Protein of unknown function DUF58	-	-	-	-	-	-	-	-	-	-	-	-	DUF58
BYD3_k127_2849927_7	313590.MED134_13331	6.08e-29	131.0	COG1361@1|root,COG1361@2|Bacteria,4PM7R@976|Bacteroidetes,1IJKW@117743|Flavobacteriia	976|Bacteroidetes	M	Aerotolerance regulator N-terminal	-	-	-	-	-	-	-	-	-	-	-	-	BatA
BYD3_k127_2849927_1	1237149.C900_01437	6.067e-144	483.0	COG0803@1|root,COG0803@2|Bacteria,4NHBN@976|Bacteroidetes,47KHC@768503|Cytophagia	976|Bacteroidetes	P	Belongs to the bacterial solute-binding protein 9 family	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_2849927_4	1443665.JACA01000033_gene1845	1.258e-65	246.0	28HMG@1|root,2Z7W1@2|Bacteria,4NI51@976|Bacteroidetes,1HZ85@117743|Flavobacteriia,2YIEV@290174|Aquimarina	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_2849927_2	1237149.C900_04861	1.028e-86	289.0	COG0727@1|root,COG0727@2|Bacteria,4NEPX@976|Bacteroidetes,47NCP@768503|Cytophagia	976|Bacteroidetes	S	Protein of unknown function (DUF3109)	-	-	-	-	-	-	-	-	-	-	-	-	DUF3109
BYD3_k127_2849927_8	608538.HTH_0289	1.905e-05	55.0	COG4422@1|root,COG4422@2|Bacteria	2|Bacteria	F	Protein of unknown function (DUF5131)	-	-	-	-	-	-	-	-	-	-	-	-	DUF5131
BYD3_k127_2849927_0	1237149.C900_04864	0.0	1167.0	COG0210@1|root,COG0210@2|Bacteria,4NDWN@976|Bacteroidetes,47JMH@768503|Cytophagia	976|Bacteroidetes	L	PFAM UvrD REP helicase	pcrA	-	3.6.4.12	ko:K03657	ko03420,ko03430,map03420,map03430	-	-	-	ko00000,ko00001,ko01000,ko03400	-	-	-	UvrD-helicase,UvrD_C
BYD3_k127_2849927_3	1237149.C900_04865	2.165e-76	263.0	28H5J@1|root,2Z7I5@2|Bacteria,4NHK6@976|Bacteroidetes,47PZX@768503|Cytophagia	976|Bacteroidetes	S	Domain of unknown function (DUF4290)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4290
BYD3_k127_2849927_5	1237149.C900_04866	1.682e-56	199.0	COG0766@1|root,COG0766@2|Bacteria,4NDV8@976|Bacteroidetes,47JQ7@768503|Cytophagia	976|Bacteroidetes	M	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine	murA	-	2.5.1.7	ko:K00790	ko00520,ko00550,ko01100,map00520,map00550,map01100	-	R00660	RC00350	ko00000,ko00001,ko01000,ko01011	-	-	-	EPSP_synthase
BYD3_k127_2853383_4	44251.PDUR_15250	1.293e-05	56.0	COG4447@1|root,COG4447@2|Bacteria,1V10R@1239|Firmicutes,4IPNU@91061|Bacilli,27614@186822|Paenibacillaceae	91061|Bacilli	S	cellulose binding	-	-	-	-	-	-	-	-	-	-	-	-	PSII_BNR,Sortilin-Vps10
BYD3_k127_2853383_1	504472.Slin_4697	6.439e-43	163.0	COG0607@1|root,COG1996@1|root,COG0607@2|Bacteria,COG1996@2|Bacteria,4PIDM@976|Bacteroidetes,47X19@768503|Cytophagia	976|Bacteroidetes	P	Rhodanese Homology Domain	-	-	-	-	-	-	-	-	-	-	-	-	Rhodanese
BYD3_k127_2853383_2	1123057.P872_24135	4.941e-29	125.0	2DNPI@1|root,32YFD@2|Bacteria,4NWD4@976|Bacteroidetes,47SPH@768503|Cytophagia	976|Bacteroidetes	S	Domain of unknown function (DUF4397)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4397
BYD3_k127_2853383_3	1392488.JHZY01000004_gene1952	2.085e-26	118.0	2DNAV@1|root,32WHG@2|Bacteria	2|Bacteria	S	Yip1 domain	-	-	-	-	-	-	-	-	-	-	-	-	Yip1
BYD3_k127_2853383_0	1121904.ARBP01000004_gene882	6.859e-184	584.0	COG4198@1|root,COG4198@2|Bacteria,4NGQH@976|Bacteroidetes,47NI5@768503|Cytophagia	976|Bacteroidetes	S	Protein of unknown function (DUF1015)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1015
BYD3_k127_2864045_9	1237149.C900_01439	1.005e-07	55.0	2DDKA@1|root,2ZIEQ@2|Bacteria,4P85D@976|Bacteroidetes,47WRH@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_2864045_10	616991.JPOO01000001_gene2931	2.055e-07	58.0	COG2010@1|root,COG2010@2|Bacteria,4NWPQ@976|Bacteroidetes	976|Bacteroidetes	C	Cytochrome c	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_2864045_6	926556.Echvi_2894	9.371e-47	174.0	COG2353@1|root,COG2353@2|Bacteria,4NSJH@976|Bacteroidetes,47QHY@768503|Cytophagia	976|Bacteroidetes	S	Belongs to the UPF0312 family	-	-	-	-	-	-	-	-	-	-	-	-	YceI
BYD3_k127_2864045_7	1237149.C900_01970	3.909e-46	172.0	COG2353@1|root,COG2353@2|Bacteria,4NSJH@976|Bacteroidetes,47QHY@768503|Cytophagia	976|Bacteroidetes	S	Belongs to the UPF0312 family	-	-	-	-	-	-	-	-	-	-	-	-	YceI
BYD3_k127_2864045_2	926556.Echvi_2895	1.969e-86	296.0	COG3637@1|root,COG3637@2|Bacteria,4NE33@976|Bacteroidetes,47NZ9@768503|Cytophagia	976|Bacteroidetes	M	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_2864045_1	1239962.C943_02211	2.294e-155	503.0	COG0591@1|root,COG0591@2|Bacteria,4NH7H@976|Bacteroidetes,47JA4@768503|Cytophagia	976|Bacteroidetes	E	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family	-	-	-	ko:K03307,ko:K14387	ko04725,ko05231,map04725,map05231	-	-	-	ko00000,ko00001,ko02000	2.A.21,2.A.21.8	-	-	HD_4,SSF
BYD3_k127_2864045_4	1121904.ARBP01000001_gene5611	5.329e-56	198.0	COG1765@1|root,COG1765@2|Bacteria,4NNTY@976|Bacteroidetes,47R4T@768503|Cytophagia	976|Bacteroidetes	O	OsmC-like protein	-	-	-	ko:K07397	-	-	-	-	ko00000	-	-	-	OsmC
BYD3_k127_2864045_0	1237149.C900_05467	8.133e-192	604.0	COG0626@1|root,COG0626@2|Bacteria,4PKE6@976|Bacteroidetes,47KC8@768503|Cytophagia	976|Bacteroidetes	E	Catalyzes the formation of L-homocysteine from O- succinyl-L-homoserine (OSHS) and hydrogen sulfide	metZ	-	-	ko:K10764	ko00270,ko00920,ko01100,map00270,map00920,map01100	-	R01288	RC00020,RC02848	ko00000,ko00001,ko01000	-	-	-	Cys_Met_Meta_PP
BYD3_k127_2864045_8	926549.KI421517_gene1987	8.597e-42	155.0	COG0476@1|root,COG0476@2|Bacteria,4NFUD@976|Bacteroidetes,47KG8@768503|Cytophagia	976|Bacteroidetes	H	MoeZ MoeB domain	moeZ	-	2.7.7.80,2.8.1.11	ko:K21029,ko:K21147	ko04122,map04122	-	R07459,R07461	RC00043	ko00000,ko00001,ko01000	-	-	-	Rhodanese,ThiF
BYD3_k127_2864045_5	929562.Emtol_2784	1.479e-49	180.0	COG0251@1|root,COG0251@2|Bacteria,4NPT2@976|Bacteroidetes,47QK8@768503|Cytophagia	976|Bacteroidetes	J	Endoribonuclease L-PSP	-	-	-	-	-	-	-	-	-	-	-	-	Aldo_ket_red,Ribonuc_L-PSP
BYD3_k127_2864045_3	504472.Slin_4218	3.624e-70	251.0	COG3291@1|root,COG3291@2|Bacteria,4NGRJ@976|Bacteroidetes,47NXA@768503|Cytophagia	976|Bacteroidetes	O	Pregnancy-associated plasma protein-A	-	-	-	-	-	-	-	-	-	-	-	-	Calx-beta,Cleaved_Adhesin,PKD,Peptidase_M43,fn3
BYD3_k127_2866920_1	1121904.ARBP01000009_gene4340	4.459e-172	552.0	COG2133@1|root,COG3291@1|root,COG4654@1|root,COG2133@2|Bacteria,COG3291@2|Bacteria,COG4654@2|Bacteria,4PNA4@976|Bacteroidetes,47YAQ@768503|Cytophagia	976|Bacteroidetes	CG	Glucose / Sorbosone dehydrogenase	-	-	-	ko:K08738	ko00920,ko01100,ko01120,ko01524,ko02020,ko04115,ko04210,ko04214,ko04215,ko04932,ko05010,ko05012,ko05014,ko05016,ko05134,ko05145,ko05152,ko05161,ko05164,ko05167,ko05168,ko05200,ko05210,ko05222,ko05416,map00920,map01100,map01120,map01524,map02020,map04115,map04210,map04214,map04215,map04932,map05010,map05012,map05014,map05016,map05134,map05145,map05152,map05161,map05164,map05167,map05168,map05200,map05210,map05222,map05416	M00595	R10151	RC03151,RC03152	ko00000,ko00001,ko00002	3.D.4.6	-	-	CBM_6,Cytochrom_C,GSDH,PKD,ThuA
BYD3_k127_2866920_3	1237149.C900_01360	4.797e-82	280.0	COG2133@1|root,COG4654@1|root,COG2133@2|Bacteria,COG4654@2|Bacteria,4NEMM@976|Bacteroidetes,47KXP@768503|Cytophagia	976|Bacteroidetes	CG	PFAM Cytochrome c, class I	-	-	-	ko:K08738	ko00920,ko01100,ko01120,ko01524,ko02020,ko04115,ko04210,ko04214,ko04215,ko04932,ko05010,ko05012,ko05014,ko05016,ko05134,ko05145,ko05152,ko05161,ko05164,ko05167,ko05168,ko05200,ko05210,ko05222,ko05416,map00920,map01100,map01120,map01524,map02020,map04115,map04210,map04214,map04215,map04932,map05010,map05012,map05014,map05016,map05134,map05145,map05152,map05161,map05164,map05167,map05168,map05200,map05210,map05222,map05416	M00595	R10151	RC03151,RC03152	ko00000,ko00001,ko00002	3.D.4.6	-	-	Cytochrom_C,DUF1080,PA14
BYD3_k127_2866920_5	509635.N824_17055	2.418e-29	122.0	COG4654@1|root,COG4654@2|Bacteria,4NSJC@976|Bacteroidetes,1ITX4@117747|Sphingobacteriia	976|Bacteroidetes	C	Cytochrome c	-	-	-	ko:K08738	ko00920,ko01100,ko01120,ko01524,ko02020,ko04115,ko04210,ko04214,ko04215,ko04932,ko05010,ko05012,ko05014,ko05016,ko05134,ko05145,ko05152,ko05161,ko05164,ko05167,ko05168,ko05200,ko05210,ko05222,ko05416,map00920,map01100,map01120,map01524,map02020,map04115,map04210,map04214,map04215,map04932,map05010,map05012,map05014,map05016,map05134,map05145,map05152,map05161,map05164,map05167,map05168,map05200,map05210,map05222,map05416	M00595	R10151	RC03151,RC03152	ko00000,ko00001,ko00002	3.D.4.6	-	-	Cytochrom_C
BYD3_k127_2866920_0	1123073.KB899241_gene2380	2.275e-191	601.0	COG1082@1|root,COG1082@2|Bacteria,1MVSJ@1224|Proteobacteria,1RRKK@1236|Gammaproteobacteria,1X42U@135614|Xanthomonadales	135614|Xanthomonadales	G	AP endonuclease family 2 C terminus	-	-	-	-	-	-	-	-	-	-	-	-	AP_endonuc_2,AP_endonuc_2_N
BYD3_k127_2866920_2	1279009.ADICEAN_02472	2.927e-161	516.0	COG0673@1|root,COG0673@2|Bacteria,4NFMS@976|Bacteroidetes,47K95@768503|Cytophagia	976|Bacteroidetes	S	Oxidoreductase family, NAD-binding Rossmann fold	-	-	-	-	-	-	-	-	-	-	-	-	GFO_IDH_MocA,GFO_IDH_MocA_C
BYD3_k127_2866920_4	1173020.Cha6605_5584	1.773e-44	166.0	COG4638@1|root,COG4638@2|Bacteria,1G1C1@1117|Cyanobacteria	1117|Cyanobacteria	P	PFAM Rieske 2Fe-2S domain	-	-	-	-	-	-	-	-	-	-	-	-	Rieske
BYD3_k127_2870046_3	313606.M23134_04812	1.449e-37	151.0	28KF4@1|root,2ZA1C@2|Bacteria,4NNRR@976|Bacteroidetes,47UXU@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	BetR
BYD3_k127_2870046_0	1237149.C900_00995	2.616e-192	607.0	COG0436@1|root,COG0436@2|Bacteria,4NENS@976|Bacteroidetes,47JJH@768503|Cytophagia	976|Bacteroidetes	E	PFAM Aminotransferase class I and II	aspC	-	2.6.1.1	ko:K00812	ko00220,ko00250,ko00270,ko00330,ko00350,ko00360,ko00400,ko00401,ko00950,ko00960,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map00250,map00270,map00330,map00350,map00360,map00400,map00401,map00950,map00960,map01100,map01110,map01130,map01210,map01230	-	R00355,R00694,R00734,R00896,R02433,R02619,R05052	RC00006	ko00000,ko00001,ko01000,ko01007	-	-	-	Aminotran_1_2
BYD3_k127_2870046_2	504472.Slin_1600	1.474e-85	287.0	COG0353@1|root,COG0353@2|Bacteria,4NEWI@976|Bacteroidetes,47JZK@768503|Cytophagia	976|Bacteroidetes	L	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO	recR	-	-	ko:K06187	ko03440,map03440	-	-	-	ko00000,ko00001,ko03400	-	-	-	RecR,Toprim_4
BYD3_k127_2870046_4	1237149.C900_00993	5.92e-34	132.0	COG2127@1|root,COG2127@2|Bacteria,4NS8R@976|Bacteroidetes	976|Bacteroidetes	S	Belongs to the ClpS family	clpS	-	-	ko:K06891	-	-	-	-	ko00000	-	-	-	ClpS
BYD3_k127_2870046_1	1123277.KB893239_gene1161	2.97e-189	602.0	COG0591@1|root,COG0591@2|Bacteria,4NEF3@976|Bacteroidetes,47KNW@768503|Cytophagia	976|Bacteroidetes	E	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family	-	-	-	-	-	-	-	-	-	-	-	-	SSF
BYD3_k127_2879983_0	1121904.ARBP01000013_gene365	0.0	1572.0	COG1413@1|root,COG2010@1|root,COG2133@1|root,COG1413@2|Bacteria,COG2010@2|Bacteria,COG2133@2|Bacteria,4NH6B@976|Bacteroidetes,47MFW@768503|Cytophagia	976|Bacteroidetes	C	PFAM PBS lyase	-	-	-	-	-	-	-	-	-	-	-	-	Cytochrom_C,GSDH,HEAT_2
BYD3_k127_2879983_3	700598.Niako_0897	1.078e-65	231.0	COG0500@1|root,COG0500@2|Bacteria	2|Bacteria	Q	methyltransferase activity	-	-	2.1.1.187,2.1.1.197	ko:K00563,ko:K02169	ko00780,ko01100,map00780,map01100	M00572	R07233,R09543	RC00003,RC00460	ko00000,ko00001,ko00002,ko01000,ko03009	-	-	-	Methyltransf_11,Methyltransf_23,Methyltransf_31
BYD3_k127_2879983_4	694427.Palpr_0630	2.587e-46	171.0	COG0262@1|root,COG0262@2|Bacteria,4NPM3@976|Bacteroidetes,2FUN2@200643|Bacteroidia	976|Bacteroidetes	H	RibD C-terminal domain	-	-	1.5.1.3	ko:K00287	ko00670,ko00790,ko01100,ko01523,map00670,map00790,map01100,map01523	M00126,M00840	R00936,R00937,R00939,R00940,R02235,R02236,R11765	RC00109,RC00110,RC00158	ko00000,ko00001,ko00002,ko01000	-	-	-	RibD_C
BYD3_k127_2879983_2	616991.JPOO01000001_gene4575	2.358e-67	237.0	COG0388@1|root,COG0388@2|Bacteria,4NEHF@976|Bacteroidetes,1I1KU@117743|Flavobacteriia	976|Bacteroidetes	K	Carbon-nitrogen hydrolase	-	-	-	-	-	-	-	-	-	-	-	-	Acetyltransf_1,CN_hydrolase
BYD3_k127_2879983_1	1237149.C900_01961	1.129e-70	243.0	COG0454@1|root,COG0454@2|Bacteria,4PN0S@976|Bacteroidetes	976|Bacteroidetes	K	Acetyltransferase (GNAT) family	-	-	-	-	-	-	-	-	-	-	-	-	Acetyltransf_1
BYD3_k127_288902_4	925409.KI911562_gene1301	1.452e-57	204.0	COG0513@1|root,COG0513@2|Bacteria,4NEVI@976|Bacteroidetes,1INY6@117747|Sphingobacteriia	976|Bacteroidetes	L	Belongs to the DEAD box helicase family	rhlE	-	3.6.4.13	ko:K11927	ko03018,map03018	-	-	-	ko00000,ko00001,ko01000,ko03019	-	-	-	DEAD,Helicase_C
BYD3_k127_288902_2	1239962.C943_04256	2.449e-147	475.0	COG3239@1|root,COG3239@2|Bacteria,4NERD@976|Bacteroidetes,47JP1@768503|Cytophagia	976|Bacteroidetes	I	fatty acid desaturase	-	-	1.14.19.3	ko:K00508	ko00591,ko01100,map00591,map01100	-	R07063	RC00917	ko00000,ko00001,ko01000,ko01004	-	-	-	FA_desaturase
BYD3_k127_288902_5	761193.Runsl_4993	6.963e-36	139.0	COG0724@1|root,COG0724@2|Bacteria,4NT1J@976|Bacteroidetes,47RES@768503|Cytophagia	976|Bacteroidetes	S	RNA recognition motif	-	-	-	-	-	-	-	-	-	-	-	-	RRM_1
BYD3_k127_288902_1	1123277.KB893239_gene1261	2.05e-189	602.0	COG5297@1|root,COG5297@2|Bacteria,4NG19@976|Bacteroidetes,47TTP@768503|Cytophagia	976|Bacteroidetes	G	Protein of unknown function (DUF1593)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1593
BYD3_k127_288902_6	1163408.UU9_05819	2.106e-10	68.0	COG1917@1|root,COG1917@2|Bacteria,1RH8X@1224|Proteobacteria,1SZUZ@1236|Gammaproteobacteria,1XAN1@135614|Xanthomonadales	135614|Xanthomonadales	S	Cupin domain	-	-	-	-	-	-	-	-	-	-	-	-	Cupin_2
BYD3_k127_288902_0	1121904.ARBP01000030_gene1946	0.0	1107.0	COG1529@1|root,COG1529@2|Bacteria,4NFFU@976|Bacteroidetes,47KU3@768503|Cytophagia	976|Bacteroidetes	C	Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL	-	-	1.3.99.16	ko:K07303	-	-	-	-	ko00000,ko01000	-	-	-	Ald_Xan_dh_C2
BYD3_k127_288902_3	1123248.KB893316_gene4675	3.106e-80	269.0	COG2080@1|root,COG2080@2|Bacteria,4NM72@976|Bacteroidetes,1IWSE@117747|Sphingobacteriia	976|Bacteroidetes	C	[2Fe-2S] binding domain	-	-	1.3.99.16	ko:K07302	-	-	-	-	ko00000,ko01000	-	-	-	Fer2,Fer2_2
BYD3_k127_289362_6	1237149.C900_05167	3.561e-89	298.0	COG5504@1|root,COG5504@2|Bacteria,4NFZP@976|Bacteroidetes,47N7G@768503|Cytophagia	976|Bacteroidetes	O	Gliding motility protein, GldB	gldB	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_289362_4	1279009.ADICEAN_01245	1.977e-103	342.0	COG0149@1|root,COG0149@2|Bacteria,4NE2F@976|Bacteroidetes,47KW6@768503|Cytophagia	976|Bacteroidetes	G	Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P)	tpiA	GO:0003674,GO:0003824,GO:0004807,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006006,GO:0006066,GO:0006071,GO:0006081,GO:0006082,GO:0006090,GO:0006091,GO:0006094,GO:0006096,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0016051,GO:0016052,GO:0016053,GO:0016310,GO:0016853,GO:0016860,GO:0016861,GO:0017144,GO:0018130,GO:0019318,GO:0019319,GO:0019359,GO:0019362,GO:0019363,GO:0019400,GO:0019405,GO:0019438,GO:0019439,GO:0019563,GO:0019637,GO:0019682,GO:0019693,GO:0019751,GO:0019752,GO:0032787,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042866,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044262,GO:0044270,GO:0044271,GO:0044275,GO:0044281,GO:0044282,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046031,GO:0046034,GO:0046164,GO:0046166,GO:0046174,GO:0046184,GO:0046364,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046700,GO:0046939,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0090407,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1901615,GO:1901616	5.3.1.1	ko:K01803	ko00010,ko00051,ko00562,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00051,map00562,map00710,map01100,map01110,map01120,map01130,map01200,map01230	M00001,M00002,M00003	R01015	RC00423	ko00000,ko00001,ko00002,ko01000,ko04147	-	-	-	TIM
BYD3_k127_289362_10	471854.Dfer_3738	5.308e-24	105.0	COG2264@1|root,COG2264@2|Bacteria,4NFRW@976|Bacteroidetes,47JQR@768503|Cytophagia	976|Bacteroidetes	J	Ribosomal protein L11 methyltransferase	prmA	-	-	ko:K02687	-	-	-	-	ko00000,ko01000,ko03009	-	-	-	PrmA
BYD3_k127_289362_9	1124780.ANNU01000015_gene2053	5.422e-59	208.0	COG2264@1|root,COG2264@2|Bacteria,4NFRW@976|Bacteroidetes,47JQR@768503|Cytophagia	976|Bacteroidetes	J	Ribosomal protein L11 methyltransferase	prmA	-	-	ko:K02687	-	-	-	-	ko00000,ko01000,ko03009	-	-	-	PrmA
BYD3_k127_289362_3	760192.Halhy_6199	9.603e-133	436.0	COG0308@1|root,COG0308@2|Bacteria,4NFTN@976|Bacteroidetes,1INM2@117747|Sphingobacteriia	976|Bacteroidetes	CE	PFAM Peptidase M1 membrane alanine aminopeptidase	-	-	-	-	-	-	-	-	-	-	-	-	Peptidase_M1
BYD3_k127_289362_2	1121875.KB907553_gene24	1.675e-175	582.0	COG0412@1|root,COG1262@1|root,COG2114@1|root,COG0412@2|Bacteria,COG1262@2|Bacteria,COG2114@2|Bacteria,4PPKM@976|Bacteroidetes	976|Bacteroidetes	T	Adenylyl- / guanylyl cyclase, catalytic domain	-	-	-	-	-	-	-	-	-	-	-	-	Guanylate_cyc
BYD3_k127_289362_1	925409.KI911562_gene1598	4.593e-186	589.0	COG2211@1|root,COG2211@2|Bacteria,4NE0X@976|Bacteroidetes,1J0SK@117747|Sphingobacteriia	976|Bacteroidetes	G	Nucleoside H+ symporter	-	-	-	-	-	-	-	-	-	-	-	-	Nuc_H_symport
BYD3_k127_289362_0	700598.Niako_2203	2.992e-231	720.0	COG0673@1|root,COG0673@2|Bacteria,4NJ92@976|Bacteroidetes,1ISF7@117747|Sphingobacteriia	976|Bacteroidetes	S	Oxidoreductase domain protein	-	-	-	-	-	-	-	-	-	-	-	-	GFO_IDH_MocA,GFO_IDH_MocA_C
BYD3_k127_289362_5	1121373.KB903620_gene2201	9.34e-103	347.0	COG0438@1|root,COG0438@2|Bacteria,4NI16@976|Bacteroidetes,47KFJ@768503|Cytophagia	976|Bacteroidetes	M	Glycosyl transferase 4-like domain	-	-	-	-	-	-	-	-	-	-	-	-	Glyco_trans_1_4,Glyco_trans_4_4,Glyco_transf_4,Glycos_transf_1
BYD3_k127_289362_8	1122605.KB893626_gene2642	1.193e-87	293.0	COG1082@1|root,COG1082@2|Bacteria,4NFKF@976|Bacteroidetes,1J11D@117747|Sphingobacteriia	976|Bacteroidetes	G	Domain of Unknown Function (DUF1080)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1080
BYD3_k127_289362_7	1237149.C900_01514	7.656e-89	297.0	COG1595@1|root,COG1595@2|Bacteria,4NF93@976|Bacteroidetes,47KW3@768503|Cytophagia	976|Bacteroidetes	K	Belongs to the sigma-70 factor family. ECF subfamily	rpoE	-	-	ko:K03088	-	-	-	-	ko00000,ko03021	-	-	-	Sigma70_r2,Sigma70_r4,Sigma70_r4_2
BYD3_k127_2902183_1	643867.Ftrac_1034	3.641e-34	147.0	COG4796@1|root,COG4796@2|Bacteria	2|Bacteria	U	Type ii and iii secretion system protein	-	-	-	-	-	-	-	-	-	-	-	-	CarbopepD_reg_2,DUF4974,Plug,STN,TonB_dep_Rec
BYD3_k127_2902183_0	1121904.ARBP01000015_gene179	4.928e-161	539.0	COG0577@1|root,COG0577@2|Bacteria,4NDUK@976|Bacteroidetes,47NTJ@768503|Cytophagia	976|Bacteroidetes	V	MacB-like periplasmic core domain	-	-	-	ko:K02004	-	M00258	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	FtsX,MacB_PCD
BYD3_k127_2921927_2	1121899.Q764_12325	3.821e-147	474.0	COG0520@1|root,COG0520@2|Bacteria,4NERR@976|Bacteroidetes,1HY99@117743|Flavobacteriia,2NSKX@237|Flavobacterium	976|Bacteroidetes	E	Selenocysteine lyase	-	-	-	-	-	-	-	-	-	-	-	-	Aminotran_5
BYD3_k127_2921927_0	468059.AUHA01000006_gene3015	1.894e-253	787.0	COG0534@1|root,COG0534@2|Bacteria,4NDUF@976|Bacteroidetes,1IQJT@117747|Sphingobacteriia	976|Bacteroidetes	V	Mate efflux family protein	-	-	-	ko:K03327	-	-	-	-	ko00000,ko02000	2.A.66.1	-	-	MatE
BYD3_k127_2921927_7	485917.Phep_0676	4.637e-48	183.0	COG2207@1|root,COG2207@2|Bacteria,4NHA5@976|Bacteroidetes,1IVFM@117747|Sphingobacteriia	976|Bacteroidetes	K	containing protein, AraC type	-	-	-	-	-	-	-	-	-	-	-	-	HTH_18
BYD3_k127_2921927_10	1408473.JHXO01000009_gene3230	4.015e-19	95.0	290IA@1|root,2ZN74@2|Bacteria	2|Bacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_2921927_8	926559.JoomaDRAFT_2313	1.099e-45	169.0	COG0589@1|root,COG0589@2|Bacteria,4NWM6@976|Bacteroidetes,1I5GS@117743|Flavobacteriia	976|Bacteroidetes	T	Universal stress protein	-	-	-	-	-	-	-	-	-	-	-	-	Usp
BYD3_k127_2921927_6	1123278.KB893556_gene3783	6.219e-74	254.0	COG0607@1|root,COG0640@1|root,COG0607@2|Bacteria,COG0640@2|Bacteria,4NNU0@976|Bacteroidetes	976|Bacteroidetes	KP	helix_turn_helix, Arsenical Resistance Operon Repressor	-	-	-	-	-	-	-	-	-	-	-	-	HTH_20,HTH_5,Rhodanese
BYD3_k127_2921927_3	1218108.KB908298_gene3562	2.299e-121	400.0	COG0491@1|root,COG0607@1|root,COG0491@2|Bacteria,COG0607@2|Bacteria,4NKJ6@976|Bacteroidetes,1I1VH@117743|Flavobacteriia	976|Bacteroidetes	P	Metallo-beta-lactamase superfamily	-	-	-	-	-	-	-	-	-	-	-	-	Lactamase_B,Rhodanese
BYD3_k127_2921927_5	1123278.KB893393_gene5611	2.113e-77	266.0	COG2820@1|root,COG2820@2|Bacteria	2|Bacteria	F	uridine phosphorylase activity	-	-	2.4.2.3	ko:K00757	ko00240,ko00983,ko01100,map00240,map00983,map01100	-	R01876,R02484,R08229	RC00063	ko00000,ko00001,ko01000	-	-	-	PNP_UDP_1
BYD3_k127_2921927_1	700598.Niako_3172	9.005e-185	585.0	COG0477@1|root,COG2814@2|Bacteria,4NEN9@976|Bacteroidetes,1IR8C@117747|Sphingobacteriia	976|Bacteroidetes	EGP	Major Facilitator Superfamily	-	-	-	-	-	-	-	-	-	-	-	-	MFS_1
BYD3_k127_2921927_4	296591.Bpro_2645	8.611e-97	323.0	COG0500@1|root,COG2226@2|Bacteria,1MVXN@1224|Proteobacteria,2VQVG@28216|Betaproteobacteria,4AFGR@80864|Comamonadaceae	28216|Betaproteobacteria	Q	Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT)	arsM	-	2.1.1.137	ko:K07755	-	-	-	-	ko00000,ko01000	-	-	-	Methyltransf_31
BYD3_k127_2921927_9	420246.GTNG_2210	1.06e-19	96.0	COG0526@1|root,COG0526@2|Bacteria,1VAPY@1239|Firmicutes,4HIQ3@91061|Bacilli,1WE5J@129337|Geobacillus	91061|Bacilli	CO	Thiol-disulfide oxidoreductase which is required in disulfide reduction during c-type cytochrome synthesis. May accept reducing equivalents from CcdA, leading to breakage of disulfide bonds in apocytochrome c	resA	GO:0008150,GO:0009987,GO:0016043,GO:0017004,GO:0022607,GO:0034622,GO:0043933,GO:0044085,GO:0065003,GO:0071840	-	-	-	-	-	-	-	-	-	-	AhpC-TSA
BYD3_k127_2933709_6	1237149.C900_02744	3.741e-25	108.0	COG4591@1|root,COG4591@2|Bacteria,4NG04@976|Bacteroidetes,47M0Q@768503|Cytophagia	976|Bacteroidetes	M	ABC-type transport system involved in lipoprotein release permease component	lolE_2	-	-	ko:K09808,ko:K09815	ko02010,map02010	M00242,M00255	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.125,3.A.1.15.3,3.A.1.15.5	-	-	FtsX,MacB_PCD
BYD3_k127_2933709_0	1237149.C900_02745	0.0	1342.0	COG0553@1|root,COG0553@2|Bacteria,4NG6P@976|Bacteroidetes,47JVA@768503|Cytophagia	976|Bacteroidetes	L	PFAM Helicase conserved C-terminal domain	-	-	2.7.11.1	ko:K08282	-	-	-	-	ko00000,ko01000	-	-	-	Helicase_C,SNF2_N
BYD3_k127_2933709_4	1237149.C900_05924	7.702e-95	320.0	COG0823@1|root,COG0823@2|Bacteria,4NIV7@976|Bacteroidetes,47RCS@768503|Cytophagia	976|Bacteroidetes	U	WD40-like Beta Propeller Repeat	-	-	-	-	-	-	-	-	-	-	-	-	PD40
BYD3_k127_2933709_7	1089547.KB913014_gene4825	3.668e-17	84.0	COG2259@1|root,COG2259@2|Bacteria,4PMH5@976|Bacteroidetes	976|Bacteroidetes	S	DoxX	-	-	-	-	-	-	-	-	-	-	-	-	DoxX
BYD3_k127_2933709_5	153721.MYP_55	1.98e-68	242.0	COG1560@1|root,COG1560@2|Bacteria,4NGQU@976|Bacteroidetes,47MHM@768503|Cytophagia	976|Bacteroidetes	M	Lipid A biosynthesis acyltransferase	waaM	-	2.3.1.241	ko:K02517	ko00540,ko01100,map00540,map01100	M00060	R05146	RC00037,RC00039	ko00000,ko00001,ko00002,ko01000,ko01005	-	-	-	Lip_A_acyltrans
BYD3_k127_2933709_2	1121904.ARBP01000004_gene1147	4.837e-106	351.0	COG0300@1|root,COG0300@2|Bacteria,4NEMK@976|Bacteroidetes,47JGN@768503|Cytophagia	976|Bacteroidetes	S	Belongs to the short-chain dehydrogenases reductases (SDR) family	-	-	-	-	-	-	-	-	-	-	-	-	adh_short
BYD3_k127_2933709_1	1237149.C900_04627	1.654e-170	555.0	COG1305@1|root,COG1305@2|Bacteria,4NE7G@976|Bacteroidetes,47JVH@768503|Cytophagia	976|Bacteroidetes	E	Domain of Unknown Function with PDB structure (DUF3857)	-	-	-	-	-	-	-	-	-	-	-	-	DUF3857,DUF3858,Transglut_core
BYD3_k127_2933709_3	1121904.ARBP01000001_gene5830	3.008e-97	334.0	COG1305@1|root,COG1305@2|Bacteria,4NEKT@976|Bacteroidetes,47NCY@768503|Cytophagia	976|Bacteroidetes	E	Domain of Unknown Function with PDB structure (DUF3857)	-	-	-	-	-	-	-	-	-	-	-	-	DUF3857,DUF3858,Transglut_core
BYD3_k127_294301_0	1237149.C900_04706	0.0	1153.0	COG0280@1|root,COG0281@1|root,COG0280@2|Bacteria,COG0281@2|Bacteria,4NFUJ@976|Bacteroidetes,47JSR@768503|Cytophagia	976|Bacteroidetes	C	Phosphate acetyl butaryl transferase	maeB	-	1.1.1.38,1.1.1.40	ko:K00027,ko:K00029	ko00620,ko00710,ko01100,ko01120,ko01200,ko02020,map00620,map00710,map01100,map01120,map01200,map02020	M00169,M00172	R00214,R00216	RC00105	ko00000,ko00001,ko00002,ko01000	-	-	-	Malic_M,PTA_PTB,malic
BYD3_k127_294301_2	643867.Ftrac_2626	3.086e-59	226.0	COG4251@1|root,COG4372@1|root,COG4251@2|Bacteria,COG4372@2|Bacteria,4NP5A@976|Bacteroidetes,47PX4@768503|Cytophagia	976|Bacteroidetes	T	7TM diverse intracellular signalling	-	-	-	-	-	-	-	-	-	-	-	-	7TMR-DISMED2,7TMR-DISM_7TM,HATPase_c
BYD3_k127_294301_1	1237149.C900_04707	1.428e-78	273.0	COG0322@1|root,COG0322@2|Bacteria,4NGEV@976|Bacteroidetes,47NDQ@768503|Cytophagia	976|Bacteroidetes	L	Domain of unknown function (DUF4837)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4837
BYD3_k127_295839_0	471854.Dfer_2538	0.0	1688.0	COG1409@1|root,COG4775@1|root,COG1409@2|Bacteria,COG4775@2|Bacteria,4NF9N@976|Bacteroidetes,47JAP@768503|Cytophagia	976|Bacteroidetes	M	Calcineurin-like phosphoesterase	-	-	-	-	-	-	-	-	-	-	-	-	Bac_surface_Ag,Metallophos,ShlB
BYD3_k127_2971241_4	1121904.ARBP01000011_gene1419	1.125e-19	91.0	COG0457@1|root,COG0457@2|Bacteria,4NGS0@976|Bacteroidetes,47MD8@768503|Cytophagia	976|Bacteroidetes	K	Tetratricopeptide repeat	-	-	-	-	-	-	-	-	-	-	-	-	TPR_12,TPR_8
BYD3_k127_2971241_3	665959.HMPREF1013_03785	4.952e-34	144.0	COG2202@1|root,COG4191@1|root,COG2202@2|Bacteria,COG4191@2|Bacteria,1VCNJ@1239|Firmicutes,4HVBX@91061|Bacilli,1ZS41@1386|Bacillus	91061|Bacilli	T	Histidine kinase	-	-	-	-	-	-	-	-	-	-	-	-	HATPase_c,HisKA,MHYT,PAS_9
BYD3_k127_2971241_0	1185876.BN8_02220	1.733e-143	464.0	COG3325@1|root,COG3325@2|Bacteria,4NGAZ@976|Bacteroidetes,47JXX@768503|Cytophagia	976|Bacteroidetes	G	Glyco_18	-	-	3.2.1.14	ko:K01183	ko00520,ko01100,map00520,map01100	-	R01206,R02334	RC00467	ko00000,ko00001,ko01000	-	GH18	-	Glyco_hydro_18
BYD3_k127_2971241_1	153721.MYP_3091	1.888e-125	414.0	COG2304@1|root,COG2304@2|Bacteria,4NEGD@976|Bacteroidetes	976|Bacteroidetes	P	von Willebrand factor, type A	-	-	-	-	-	-	-	-	-	-	-	-	VWA
BYD3_k127_2971241_2	153721.MYP_3092	7.247e-50	196.0	COG0457@1|root,COG2972@1|root,COG0457@2|Bacteria,COG2972@2|Bacteria,4NF45@976|Bacteroidetes,47QDQ@768503|Cytophagia	976|Bacteroidetes	T	signal transduction protein with a C-terminal ATPase domain	-	-	-	-	-	-	-	-	-	-	-	-	His_kinase,TPR_12,TPR_16,TPR_7,TPR_8
BYD3_k127_297876_3	388413.ALPR1_07930	2.697e-17	84.0	COG1629@1|root,COG4771@2|Bacteria,4NDU8@976|Bacteroidetes,47K6G@768503|Cytophagia	976|Bacteroidetes	P	PFAM TonB-dependent Receptor Plug	-	-	-	-	-	-	-	-	-	-	-	-	CarbopepD_reg_2,Plug,TonB_dep_Rec
BYD3_k127_297876_1	1121904.ARBP01000002_gene6790	1.988e-76	267.0	COG1387@1|root,COG1387@2|Bacteria,4NIJU@976|Bacteroidetes,47Q20@768503|Cytophagia	976|Bacteroidetes	E	PHP domain	-	-	3.1.3.15	ko:K04486	ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230	M00026	R03013	RC00017	ko00000,ko00001,ko00002,ko01000	-	-	-	PHP
BYD3_k127_297876_0	1250232.JQNJ01000001_gene1587	3.954e-129	426.0	2C31A@1|root,2Z7UP@2|Bacteria,4NECU@976|Bacteroidetes,1HX63@117743|Flavobacteriia	976|Bacteroidetes	S	membrane	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_297876_5	926556.Echvi_3386	1.059e-06	58.0	2E9CR@1|root,342NY@2|Bacteria,4P4H9@976|Bacteroidetes,47VHQ@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_297876_2	471854.Dfer_3095	7.445e-22	97.0	COG0546@1|root,COG0546@2|Bacteria,4NMEX@976|Bacteroidetes,47XK8@768503|Cytophagia	976|Bacteroidetes	S	HAD-hyrolase-like	-	-	-	-	-	-	-	-	-	-	-	-	HAD_2
BYD3_k127_297876_4	925409.KI911562_gene2024	1.861e-11	68.0	COG0546@1|root,COG0546@2|Bacteria,4NMEX@976|Bacteroidetes,1IS6P@117747|Sphingobacteriia	976|Bacteroidetes	S	HAD-hyrolase-like	-	-	-	-	-	-	-	-	-	-	-	-	HAD_2
BYD3_k127_2984694_2	391603.FBALC1_08003	3.698e-84	295.0	COG1680@1|root,COG1729@1|root,COG1680@2|Bacteria,COG1729@2|Bacteria,4NI1Z@976|Bacteroidetes,1HYQF@117743|Flavobacteriia	976|Bacteroidetes	V	COG1680 Beta-lactamase class C and other penicillin binding proteins	-	-	-	-	-	-	-	-	-	-	-	-	Beta-lactamase,DUF3471
BYD3_k127_2984694_0	760192.Halhy_3683	1.318e-164	550.0	COG0577@1|root,COG0577@2|Bacteria,4NDUK@976|Bacteroidetes,1IRGG@117747|Sphingobacteriia	976|Bacteroidetes	V	MacB-like periplasmic core domain	-	-	-	-	-	-	-	-	-	-	-	-	FtsX,MacB_PCD
BYD3_k127_2984694_5	1123277.KB893195_gene5684	3.532e-32	128.0	COG1695@1|root,COG1695@2|Bacteria,4P6G7@976|Bacteroidetes,47VZ7@768503|Cytophagia	976|Bacteroidetes	K	Transcriptional regulator PadR-like family	-	-	-	-	-	-	-	-	-	-	-	-	PadR
BYD3_k127_2984694_3	485918.Cpin_6843	1.535e-81	285.0	COG0304@1|root,COG0304@2|Bacteria,4NEU6@976|Bacteroidetes,1ISE9@117747|Sphingobacteriia	976|Bacteroidetes	IQ	Beta-ketoacyl synthase, N-terminal domain	-	-	-	-	-	-	-	-	-	-	-	-	Ketoacyl-synt_2,ketoacyl-synt
BYD3_k127_2984694_1	153721.MYP_4265	9.04e-130	426.0	COG0304@1|root,COG0304@2|Bacteria,4NFC8@976|Bacteroidetes,47N4W@768503|Cytophagia	976|Bacteroidetes	IQ	Beta-ketoacyl synthase, C-terminal domain	-	-	2.3.1.41	ko:K00647	ko00061,ko00780,ko01100,ko01212,map00061,map00780,map01100,map01212	M00083,M00572	R04355,R04726,R04952,R04957,R04960,R04963,R04968,R07762,R10115,R10119	RC00039,RC02728,RC02729,RC02888	ko00000,ko00001,ko00002,ko01000,ko01004	-	-	-	Ketoacyl-synt_C,ketoacyl-synt
BYD3_k127_2984694_6	575590.HMPREF0156_01329	1.064e-29	119.0	COG0236@1|root,COG0236@2|Bacteria,4NSFU@976|Bacteroidetes	976|Bacteroidetes	IQ	acyl carrier protein	acpP2	-	-	ko:K02078	-	-	-	-	ko00000,ko00001	-	-	-	PP-binding
BYD3_k127_2984694_4	485918.Cpin_6846	4.283e-65	234.0	COG0842@1|root,COG0842@2|Bacteria,4NGFA@976|Bacteroidetes,1ISKA@117747|Sphingobacteriia	976|Bacteroidetes	V	ABC-2 type transporter	-	-	-	ko:K01992	-	M00254	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	ABC2_membrane_3
BYD3_k127_2996564_1	1237149.C900_00750	6.293e-264	833.0	COG1752@1|root,COG1752@2|Bacteria,4NDXY@976|Bacteroidetes,47QDC@768503|Cytophagia	976|Bacteroidetes	M	Patatin-like phospholipase	-	-	-	ko:K07001	-	-	-	-	ko00000	-	-	-	Patatin
BYD3_k127_2996564_4	1237149.C900_00751	5.441e-163	523.0	COG0739@1|root,COG0739@2|Bacteria,4NECF@976|Bacteroidetes,47MV0@768503|Cytophagia	976|Bacteroidetes	M	PFAM Peptidase family M23	-	-	-	-	-	-	-	-	-	-	-	-	Peptidase_M23
BYD3_k127_2996564_0	1237149.C900_00753	3.975e-305	950.0	COG4232@1|root,COG4232@2|Bacteria,4NEW6@976|Bacteroidetes,47JTC@768503|Cytophagia	976|Bacteroidetes	CO	Cytochrome c biogenesis protein transmembrane region	dsbD	-	1.8.1.8	ko:K04084	-	-	-	-	ko00000,ko01000,ko03110	5.A.1.1	-	-	DsbC,DsbD,Thioredoxin_7
BYD3_k127_2996564_3	1237149.C900_00811	4.628e-181	574.0	COG0019@1|root,COG0019@2|Bacteria,4NE7X@976|Bacteroidetes,47JBT@768503|Cytophagia	976|Bacteroidetes	E	Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine	lysA	-	4.1.1.20	ko:K01586	ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00300,map01100,map01110,map01120,map01130,map01230	M00016,M00525,M00526,M00527	R00451	RC00299	ko00000,ko00001,ko00002,ko01000	-	-	-	Orn_Arg_deC_N,Orn_DAP_Arg_deC
BYD3_k127_2996564_5	1124780.ANNU01000005_gene2378	1.709e-91	307.0	COG0596@1|root,COG0596@2|Bacteria,4NDZI@976|Bacteroidetes,47JB4@768503|Cytophagia	976|Bacteroidetes	S	Serine aminopeptidase, S33	ybfF	-	-	-	-	-	-	-	-	-	-	-	Abhydrolase_1
BYD3_k127_2996564_6	1034347.CAHJ01000022_gene3315	3.998e-90	305.0	COG4989@1|root,COG4989@2|Bacteria,1TQ12@1239|Firmicutes,4HA57@91061|Bacilli,1ZD8D@1386|Bacillus	91061|Bacilli	S	Oxidoreductase	ycsN	-	-	-	-	-	-	-	-	-	-	-	Aldo_ket_red
BYD3_k127_2996564_2	1237149.C900_04576	3.62e-202	634.0	COG0178@1|root,COG0178@2|Bacteria,4NFQU@976|Bacteroidetes,47K0C@768503|Cytophagia	976|Bacteroidetes	L	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate	uvrA	-	-	ko:K03701	ko03420,map03420	-	-	-	ko00000,ko00001,ko03400	-	-	-	ABC_tran
BYD3_k127_3009723_5	1237149.C900_00336	2.108e-27	113.0	COG2244@1|root,COG2244@2|Bacteria,4NI21@976|Bacteroidetes,47QZ9@768503|Cytophagia	976|Bacteroidetes	S	Polysaccharide biosynthesis C-terminal domain	-	-	-	-	-	-	-	-	-	-	-	-	Polysacc_synt,Polysacc_synt_3,Polysacc_synt_C
BYD3_k127_3009723_3	1279009.ADICEAN_01534	9.37e-84	286.0	COG1496@1|root,COG1496@2|Bacteria,4NM9H@976|Bacteroidetes,47JW0@768503|Cytophagia	976|Bacteroidetes	S	Belongs to the multicopper oxidase YfiH RL5 family	-	GO:0003674,GO:0003824,GO:0005488,GO:0005507,GO:0005515,GO:0008150,GO:0008152,GO:0016491,GO:0016679,GO:0016682,GO:0042802,GO:0042803,GO:0043167,GO:0043169,GO:0046872,GO:0046914,GO:0046983,GO:0055114	-	ko:K05810	-	-	-	-	ko00000,ko01000	-	-	-	Cu-oxidase_4
BYD3_k127_3009723_0	1121904.ARBP01000004_gene1059	2.293e-195	638.0	COG0577@1|root,COG0577@2|Bacteria,4NDUK@976|Bacteroidetes,47NTJ@768503|Cytophagia	976|Bacteroidetes	V	MacB-like periplasmic core domain	-	-	-	ko:K02004	-	M00258	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	FtsX,MacB_PCD
BYD3_k127_3009723_6	491205.JARQ01000007_gene3240	3.878e-18	89.0	COG0745@1|root,COG0745@2|Bacteria,4NQNT@976|Bacteroidetes,1I3AQ@117743|Flavobacteriia,3ZS3I@59732|Chryseobacterium	976|Bacteroidetes	T	cheY-homologous receiver domain	-	-	-	-	-	-	-	-	-	-	-	-	Response_reg
BYD3_k127_3009723_1	504472.Slin_3180	8.237e-168	533.0	COG0667@1|root,COG0667@2|Bacteria,4NEDK@976|Bacteroidetes,47KXI@768503|Cytophagia	976|Bacteroidetes	C	PFAM aldo keto reductase	-	-	-	-	-	-	-	-	-	-	-	-	Aldo_ket_red
BYD3_k127_3009723_4	929703.KE386491_gene1356	3.062e-80	272.0	COG0666@1|root,COG0666@2|Bacteria,4P2SK@976|Bacteroidetes	976|Bacteroidetes	S	Ankyrin repeat	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_3009723_2	1123248.KB893321_gene474	4.927e-128	421.0	COG4888@1|root,COG4888@2|Bacteria,4NEE8@976|Bacteroidetes	976|Bacteroidetes	S	PFAM ASPIC and UnbV	-	-	-	-	-	-	-	-	-	-	-	-	UnbV_ASPIC,VCBS
BYD3_k127_3012073_1	1124780.ANNU01000032_gene1260	7.892e-111	365.0	COG0248@1|root,COG0248@2|Bacteria,4NEI0@976|Bacteroidetes,47KHJ@768503|Cytophagia	976|Bacteroidetes	FP	PFAM Ppx GppA phosphatase	ppx	-	3.6.1.11,3.6.1.40	ko:K01524	ko00230,map00230	-	R03409	RC00002	ko00000,ko00001,ko01000	-	-	-	Ppx-GppA
BYD3_k127_3012073_2	1237149.C900_01221	1.801e-97	333.0	COG2885@1|root,COG2885@2|Bacteria	2|Bacteria	M	chlorophyll binding	-	-	-	-	-	-	-	-	-	-	-	-	PorP_SprF,SPOR
BYD3_k127_3012073_0	643867.Ftrac_3149	4.309e-224	733.0	COG3291@1|root,COG3291@2|Bacteria	2|Bacteria	S	metallopeptidase activity	-	-	3.2.1.1	ko:K01176	ko00500,ko01100,ko04973,map00500,map01100,map04973	-	R02108,R02112,R11262	-	ko00000,ko00001,ko01000	-	GH13	-	CHU_C,IgGFc_binding,PKD,VCBS
BYD3_k127_3012073_3	1237149.C900_01219	9.512e-72	249.0	COG4932@1|root,COG5644@1|root,COG4932@2|Bacteria,COG5644@2|Bacteria,4NN56@976|Bacteroidetes,47Q8D@768503|Cytophagia	976|Bacteroidetes	M	amine dehydrogenase activity	-	-	-	-	-	-	-	-	-	-	-	-	CHU_C,VCBS
BYD3_k127_302263_1	1266925.JHVX01000003_gene421	2.563e-137	453.0	COG0659@1|root,COG0659@2|Bacteria,1NS9W@1224|Proteobacteria,2WAZC@28216|Betaproteobacteria,371SK@32003|Nitrosomonadales	28216|Betaproteobacteria	P	Sulfate permease family	-	-	-	-	-	-	-	-	-	-	-	-	Sulfate_transp
BYD3_k127_302263_0	1150600.ADIARSV_0897	4.999e-182	590.0	COG0651@1|root,COG0651@2|Bacteria	2|Bacteria	CP	ATP synthesis coupled electron transport	hyfB	GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944	-	ko:K12137,ko:K15828	-	-	-	-	ko00000,ko01000	-	-	iB21_1397.B21_02538,iECBD_1354.ECBD_1002,iECB_1328.ECB_02573,iECD_1391.ECD_02573,iECED1_1282.ECED1_3174,iECO111_1330.ECO111_3443,iECO26_1355.ECO26_3788,iECP_1309.ECP_2686,iEKO11_1354.EKO11_1252,iEcHS_1320.EcHS_A2859,iLF82_1304.LF82_1065,iNRG857_1313.NRG857_13330	Proton_antipo_M,Proton_antipo_N
BYD3_k127_302263_2	1150600.ADIARSV_0897	1.262e-130	440.0	COG0651@1|root,COG0651@2|Bacteria	2|Bacteria	CP	ATP synthesis coupled electron transport	hyfB	GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944	-	ko:K12137,ko:K15828	-	-	-	-	ko00000,ko01000	-	-	iB21_1397.B21_02538,iECBD_1354.ECBD_1002,iECB_1328.ECB_02573,iECD_1391.ECD_02573,iECED1_1282.ECED1_3174,iECO111_1330.ECO111_3443,iECO26_1355.ECO26_3788,iECP_1309.ECP_2686,iEKO11_1354.EKO11_1252,iEcHS_1320.EcHS_A2859,iLF82_1304.LF82_1065,iNRG857_1313.NRG857_13330	Proton_antipo_M,Proton_antipo_N
BYD3_k127_3024885_20	742767.HMPREF9456_01131	0.0004188	49.0	COG1413@1|root,COG1413@2|Bacteria,4NXQU@976|Bacteroidetes,2FTDB@200643|Bacteroidia,22Z03@171551|Porphyromonadaceae	976|Bacteroidetes	C	lyase activity	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_3024885_13	1237149.C900_02642	1.422e-63	222.0	COG1595@1|root,COG1595@2|Bacteria,4NSED@976|Bacteroidetes,47Q3K@768503|Cytophagia	976|Bacteroidetes	K	Sigma-70, region 4	-	-	-	ko:K03088	-	-	-	-	ko00000,ko03021	-	-	-	Sigma70_r2,Sigma70_r4_2
BYD3_k127_3024885_4	1123277.KB893173_gene1827	1.343e-168	562.0	COG2304@1|root,COG2304@2|Bacteria,4NFX3@976|Bacteroidetes,47JM8@768503|Cytophagia	976|Bacteroidetes	S	von Willebrand factor, type A	-	-	-	ko:K07114	-	-	-	-	ko00000,ko02000	1.A.13.2.2,1.A.13.2.3	-	-	DUF3829,VWA,VWA_2
BYD3_k127_3024885_12	929556.Solca_3509	2.211e-72	249.0	COG2353@1|root,COG2353@2|Bacteria,4NNMD@976|Bacteroidetes,1ISB4@117747|Sphingobacteriia	976|Bacteroidetes	S	Belongs to the UPF0312 family	-	-	-	-	-	-	-	-	-	-	-	-	YceI
BYD3_k127_3024885_8	1089547.KB913013_gene1774	4.154e-130	421.0	COG3384@1|root,COG3384@2|Bacteria,4NFGT@976|Bacteroidetes,47KW5@768503|Cytophagia	976|Bacteroidetes	S	PFAM Catalytic LigB subunit of aromatic ring-opening dioxygenase	-	-	-	ko:K15777	ko00965,map00965	-	R08836	RC00387	ko00000,ko00001,ko01000	-	-	-	LigB
BYD3_k127_3024885_14	485918.Cpin_0921	1.058e-47	177.0	COG4502@1|root,COG4502@2|Bacteria,4NQDT@976|Bacteroidetes,1ISVS@117747|Sphingobacteriia	976|Bacteroidetes	S	5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C)	-	-	-	-	-	-	-	-	-	-	-	-	NT5C
BYD3_k127_3024885_1	471854.Dfer_1312	5.227e-222	707.0	COG4948@1|root,COG4948@2|Bacteria,4PKP3@976|Bacteroidetes,47NVU@768503|Cytophagia	976|Bacteroidetes	M	Glycosyl-hydrolase 97 C-terminal, oligomerisation	-	-	3.2.1.20	ko:K01187	ko00052,ko00500,ko01100,map00052,map00500,map01100	-	R00028,R00801,R00802,R06087,R06088	RC00028,RC00049,RC00077	ko00000,ko00001,ko01000	-	GH31	-	GH97_C,GH97_N,Glyco_hydro_97
BYD3_k127_3024885_17	714943.Mucpa_5237	5.376e-13	74.0	2APBA@1|root,31EDH@2|Bacteria,4NSFA@976|Bacteroidetes,1ITSE@117747|Sphingobacteriia	976|Bacteroidetes	S	Putative prokaryotic signal transducing protein	-	-	-	-	-	-	-	-	-	-	-	-	DUF2007
BYD3_k127_3024885_15	118161.KB235922_gene4391	4.217e-46	171.0	COG1611@1|root,COG1611@2|Bacteria,1G5P3@1117|Cyanobacteria,3VK1P@52604|Pleurocapsales	1117|Cyanobacteria	S	TIGRFAM TIGR00725 family protein	-	-	3.2.2.10	ko:K06966	ko00230,ko00240,map00230,map00240	-	R00182,R00510	RC00063,RC00318	ko00000,ko00001,ko01000	-	-	-	Lysine_decarbox
BYD3_k127_3024885_5	1123248.KB893316_gene4622	1.794e-148	476.0	COG0667@1|root,COG0667@2|Bacteria,4NF06@976|Bacteroidetes,1IP2J@117747|Sphingobacteriia	976|Bacteroidetes	C	aldo keto reductase	-	-	-	-	-	-	-	-	-	-	-	-	Aldo_ket_red
BYD3_k127_3024885_0	1237149.C900_05842	6.836e-289	915.0	COG0457@1|root,COG4995@1|root,COG0457@2|Bacteria,COG4995@2|Bacteria,4NKPZ@976|Bacteroidetes,47NIF@768503|Cytophagia	976|Bacteroidetes	S	CHAT domain	-	-	-	-	-	-	-	-	-	-	-	-	CHAT,TPR_10,TPR_12,TPR_8
BYD3_k127_3024885_7	1121904.ARBP01000006_gene3817	1.997e-138	448.0	COG3622@1|root,COG3622@2|Bacteria,4NG74@976|Bacteroidetes,47K7Z@768503|Cytophagia	976|Bacteroidetes	G	PFAM Xylose isomerase-like TIM barrel	-	-	5.3.1.22	ko:K01816	ko00630,ko01100,map00630,map01100	-	R01394	RC00511	ko00000,ko00001,ko01000	-	-	-	AP_endonuc_2
BYD3_k127_3024885_6	1120968.AUBX01000016_gene1540	1.053e-144	468.0	COG0144@1|root,COG0144@2|Bacteria,4NEV7@976|Bacteroidetes,47NAK@768503|Cytophagia	976|Bacteroidetes	J	TIGRFAM ribosomal RNA small subunit methyltransferase RsmB	rsmB	-	2.1.1.176	ko:K03500	-	-	-	-	ko00000,ko01000,ko03009	-	-	-	Methyltr_RsmB-F,Methyltr_RsmF_N
BYD3_k127_3024885_9	700598.Niako_6919	7.242e-119	391.0	COG1262@1|root,COG1262@2|Bacteria,4NEUZ@976|Bacteroidetes,1IS6V@117747|Sphingobacteriia	976|Bacteroidetes	S	Sulfatase-modifying factor enzyme 1	-	-	-	-	-	-	-	-	-	-	-	-	Cytochrom_NNT,FGE-sulfatase
BYD3_k127_3024885_2	925409.KI911562_gene1243	3.194e-218	684.0	COG0673@1|root,COG0673@2|Bacteria,4NF9M@976|Bacteroidetes,1IPWB@117747|Sphingobacteriia	976|Bacteroidetes	S	Oxidoreductase domain protein	-	-	-	-	-	-	-	-	-	-	-	-	GFO_IDH_MocA,TAT_signal
BYD3_k127_3024885_16	1232410.KI421424_gene1627	2.017e-20	96.0	COG0745@1|root,COG0745@2|Bacteria,1NZI7@1224|Proteobacteria,430PP@68525|delta/epsilon subdivisions,2WVYC@28221|Deltaproteobacteria,43V84@69541|Desulfuromonadales	28221|Deltaproteobacteria	KT	cheY-homologous receiver domain	-	-	-	-	-	-	-	-	-	-	-	-	Response_reg
BYD3_k127_3024885_11	1237149.C900_05843	3.359e-80	274.0	COG0204@1|root,COG0204@2|Bacteria,4NG5R@976|Bacteroidetes,47QIE@768503|Cytophagia	976|Bacteroidetes	I	Phosphate acyltransferases	plsC	-	2.3.1.51	ko:K00655	ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110	M00089	R02241,R09381	RC00004,RC00037,RC00039	ko00000,ko00001,ko00002,ko01000,ko01004	-	-	-	Acyltransferase
BYD3_k127_3024885_18	929703.KE386492_gene4422	1.466e-07	53.0	COG4206@1|root,COG4772@1|root,COG4206@2|Bacteria,COG4772@2|Bacteria,4NH5V@976|Bacteroidetes,47KFP@768503|Cytophagia	976|Bacteroidetes	P	PFAM TonB-dependent Receptor	-	-	-	ko:K16091	-	-	-	-	ko00000,ko02000	1.B.14.1.14	-	-	CarbopepD_reg_2,Plug,TonB_dep_Rec
BYD3_k127_3024885_3	760192.Halhy_6227	8.342e-215	677.0	COG0671@1|root,COG0671@2|Bacteria,4NGYP@976|Bacteroidetes,1IR1B@117747|Sphingobacteriia	976|Bacteroidetes	I	PAP2 superfamily	-	-	-	-	-	-	-	-	-	-	-	-	PAP2
BYD3_k127_3024885_10	886377.Murru_0169	8.562e-115	378.0	28K2C@1|root,2Z9RQ@2|Bacteria,4NJP3@976|Bacteroidetes,1IIZ9@117743|Flavobacteriia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_303471_1	485917.Phep_1317	2.099e-143	498.0	COG0745@1|root,COG2207@1|root,COG3292@1|root,COG5002@1|root,COG0745@2|Bacteria,COG2207@2|Bacteria,COG3292@2|Bacteria,COG5002@2|Bacteria,4P0IA@976|Bacteroidetes	976|Bacteroidetes	T	histidine kinase-, DNA gyrase B	-	-	-	-	-	-	-	-	-	-	-	-	HATPase_c,HTH_18,HisKA,Reg_prop,Response_reg,Y_Y_Y
BYD3_k127_303471_0	1123277.KB893172_gene843	1.443e-147	483.0	28K2T@1|root,2Z9S3@2|Bacteria,4NJHU@976|Bacteroidetes,47JZI@768503|Cytophagia	976|Bacteroidetes	S	SusD family	-	-	-	-	-	-	-	-	-	-	-	-	SusD_RagB
BYD3_k127_3047489_1	1123278.KB893581_gene983	6.864e-56	208.0	COG0577@1|root,COG0577@2|Bacteria,4NDUK@976|Bacteroidetes,47NWV@768503|Cytophagia	976|Bacteroidetes	V	MacB-like periplasmic core domain	-	-	-	ko:K02004	-	M00258	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	FtsX,MacB_PCD
BYD3_k127_3047489_0	1089547.KB913013_gene1708	3.007e-236	746.0	COG3525@1|root,COG3525@2|Bacteria,4NE08@976|Bacteroidetes,47N6T@768503|Cytophagia	976|Bacteroidetes	G	Glycosyl hydrolase family 20, domain 2	-	-	3.2.1.52	ko:K12373	ko00511,ko00513,ko00520,ko00531,ko00603,ko00604,ko01100,ko04142,map00511,map00513,map00520,map00531,map00603,map00604,map01100,map04142	M00079	R00022,R06004,R11316	RC00049	ko00000,ko00001,ko00002,ko01000,ko03110	-	GH20	-	Fn3_assoc,Glyco_hydro_20,Glyco_hydro_20b
BYD3_k127_3049952_4	1313301.AUGC01000004_gene2344	4.407e-114	384.0	COG1629@1|root,COG1629@2|Bacteria,4PKRK@976|Bacteroidetes	976|Bacteroidetes	P	Outer membrane receptor	-	-	-	-	-	-	-	-	-	-	-	-	CarbopepD_reg_2,Plug,TonB_dep_Rec
BYD3_k127_3049952_7	1313301.AUGC01000004_gene2344	7.403e-63	224.0	COG1629@1|root,COG1629@2|Bacteria,4PKRK@976|Bacteroidetes	976|Bacteroidetes	P	Outer membrane receptor	-	-	-	-	-	-	-	-	-	-	-	-	CarbopepD_reg_2,Plug,TonB_dep_Rec
BYD3_k127_3049952_0	1122605.KB893648_gene3637	2.646e-193	619.0	COG0464@1|root,COG0464@2|Bacteria,4NJBD@976|Bacteroidetes,1ISED@117747|Sphingobacteriia	976|Bacteroidetes	O	of the AAA class	-	-	-	-	-	-	-	-	-	-	-	-	AAA
BYD3_k127_3049952_5	1123248.KB893330_gene443	7.259e-94	316.0	COG2207@1|root,COG2207@2|Bacteria,4NE6T@976|Bacteroidetes,1IW44@117747|Sphingobacteriia	976|Bacteroidetes	K	Transcriptional regulator, AraC family	-	-	-	-	-	-	-	-	-	-	-	-	HTH_18
BYD3_k127_3049952_2	1123248.KB893330_gene442	3.141e-171	542.0	COG5285@1|root,COG5285@2|Bacteria,4NG3B@976|Bacteroidetes,1IRQI@117747|Sphingobacteriia	976|Bacteroidetes	Q	Phytanoyl-CoA dioxygenase (PhyH)	-	-	-	-	-	-	-	-	-	-	-	-	PhyH
BYD3_k127_3049952_1	313603.FB2170_15198	6.741e-177	563.0	COG0006@1|root,COG0006@2|Bacteria,4NJI0@976|Bacteroidetes,1HZE8@117743|Flavobacteriia	976|Bacteroidetes	E	Creatinase/Prolidase N-terminal domain	pepQ	-	3.4.11.9,3.4.13.9	ko:K01262,ko:K01271	-	-	-	-	ko00000,ko01000,ko01002	-	-	-	Creatinase_N,Peptidase_M24
BYD3_k127_3049952_6	926549.KI421517_gene491	6.052e-85	291.0	COG1090@1|root,COG1090@2|Bacteria,4NINM@976|Bacteroidetes,47KA1@768503|Cytophagia	976|Bacteroidetes	S	PFAM NAD dependent epimerase dehydratase family	-	-	-	ko:K07071	-	-	-	-	ko00000	-	-	-	DUF1731,Epimerase
BYD3_k127_3049952_3	929703.KE386491_gene3651	4.204e-140	458.0	COG2152@1|root,COG2152@2|Bacteria,4NG7B@976|Bacteroidetes,47MHY@768503|Cytophagia	976|Bacteroidetes	G	beta-1,4-mannooligosaccharide phosphorylase	-	-	3.2.1.197	ko:K21065	-	-	R11544	RC00049	ko00000,ko01000	-	-	-	Glyco_hydro_130
BYD3_k127_3049952_8	926549.KI421517_gene792	2.063e-28	117.0	COG1611@1|root,COG1611@2|Bacteria,4NF20@976|Bacteroidetes,47M0E@768503|Cytophagia	976|Bacteroidetes	S	Belongs to the LOG family	fmt2	-	3.2.2.10	ko:K06966	ko00230,ko00240,map00230,map00240	-	R00182,R00510	RC00063,RC00318	ko00000,ko00001,ko01000	-	-	-	Lysine_decarbox
BYD3_k127_3064698_1	1191523.MROS_0118	3.079e-123	436.0	COG0745@1|root,COG3292@1|root,COG5002@1|root,COG0745@2|Bacteria,COG3292@2|Bacteria,COG5002@2|Bacteria	2|Bacteria	T	protein histidine kinase activity	-	-	-	ko:K16923	-	M00582	-	-	ko00000,ko00002,ko02000	3.A.1.28	-	-	HATPase_c,HTH_18,HisKA,PAS_4,Reg_prop,Response_reg,Y_Y_Y
BYD3_k127_3064698_0	1121904.ARBP01000003_gene6356	2.125e-154	518.0	COG0642@1|root,COG0745@1|root,COG3292@1|root,COG0745@2|Bacteria,COG2205@2|Bacteria,COG3292@2|Bacteria,4NDXU@976|Bacteroidetes,47JBS@768503|Cytophagia	976|Bacteroidetes	T	Two component regulator propeller	-	-	-	-	-	-	-	-	-	-	-	-	HATPase_c,HTH_18,HisKA,Reg_prop,Response_reg,Y_Y_Y
BYD3_k127_3067092_3	485918.Cpin_1597	1.825e-64	228.0	COG1477@1|root,COG1477@2|Bacteria,4NGEK@976|Bacteroidetes,1IQG3@117747|Sphingobacteriia	976|Bacteroidetes	H	Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein	apbE	-	2.7.1.180	ko:K03734	-	-	-	-	ko00000,ko01000	-	-	-	ApbE
BYD3_k127_3067092_4	1313421.JHBV01000014_gene3938	2.48e-31	127.0	COG0526@1|root,COG1477@1|root,COG0526@2|Bacteria,COG1477@2|Bacteria,4NGEK@976|Bacteroidetes,1IQG3@117747|Sphingobacteriia	976|Bacteroidetes	H	Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein	apbE	-	2.7.1.180	ko:K03734	-	-	-	-	ko00000,ko01000	-	-	-	ApbE
BYD3_k127_3067092_2	933115.GPDM_00775	2.818e-79	274.0	COG0122@1|root,COG0122@2|Bacteria,1TQAF@1239|Firmicutes,4HBYM@91061|Bacilli,26E0M@186818|Planococcaceae	91061|Bacilli	L	COG0122 3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase	alkA	-	3.2.2.21	ko:K01247,ko:K13529	ko03410,map03410	-	-	-	ko00000,ko00001,ko01000,ko03000,ko03400	-	-	-	AlkA_N,HhH-GPD,OGG_N
BYD3_k127_3067092_1	1237149.C900_03775	1.317e-127	419.0	COG4192@1|root,COG4192@2|Bacteria,4NFY7@976|Bacteroidetes,47MMQ@768503|Cytophagia	976|Bacteroidetes	T	Domain of unknown function (DUF4407)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4407
BYD3_k127_3067092_0	468059.AUHA01000003_gene1835	2.865e-173	578.0	COG1404@1|root,COG1404@2|Bacteria,4NHSQ@976|Bacteroidetes,1IWJ1@117747|Sphingobacteriia	976|Bacteroidetes	O	Subtilase family	-	-	-	-	-	-	-	-	-	-	-	-	Peptidase_S8
BYD3_k127_3081639_1	5679.XP_010698025.1	0.0007624	50.0	KOG3861@1|root,KOG3861@2759|Eukaryota,3XTBD@5653|Kinetoplastida	5653|Kinetoplastida	W	Intraflagellar transport protein component	-	-	-	ko:K19681	-	-	-	-	ko00000,ko03036	-	-	-	-
BYD3_k127_3081639_0	1123277.KB893195_gene5685	5.612e-232	740.0	COG0577@1|root,COG0577@2|Bacteria,4NDUK@976|Bacteroidetes	976|Bacteroidetes	V	permease	-	-	-	-	-	-	-	-	-	-	-	-	FtsX,MacB_PCD
BYD3_k127_3098774_1	1237149.C900_05255	2.545e-148	490.0	COG3291@1|root,COG3291@2|Bacteria,4NJ47@976|Bacteroidetes,47JQU@768503|Cytophagia	976|Bacteroidetes	N	C-terminal domain of CHU protein family	-	-	-	-	-	-	-	-	-	-	-	-	CHU_C,PKD,SBBP
BYD3_k127_3098774_2	1237149.C900_04487	6.303e-124	409.0	COG4339@1|root,COG4339@2|Bacteria,4PKIS@976|Bacteroidetes,47KP1@768503|Cytophagia	976|Bacteroidetes	S	PFAM Metal-dependent phosphohydrolase, HD	-	-	-	-	-	-	-	-	-	-	-	-	HD
BYD3_k127_3098774_5	700598.Niako_2074	1.384e-47	177.0	2DVQJ@1|root,32UZZ@2|Bacteria,4PGTB@976|Bacteroidetes,1IUA6@117747|Sphingobacteriia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_3098774_6	1237149.C900_00073	6.258e-44	167.0	COG0457@1|root,COG0457@2|Bacteria	1237149.C900_00073|-	S	peptidyl-tyrosine sulfation	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_3098774_3	1237149.C900_00072	1.361e-111	367.0	COG1273@1|root,COG1273@2|Bacteria,4NHHQ@976|Bacteroidetes,47PE5@768503|Cytophagia	976|Bacteroidetes	L	With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD	ku	-	-	ko:K10979	ko03450,map03450	-	-	-	ko00000,ko00001,ko03400	-	-	-	Ku
BYD3_k127_3098774_0	1239962.C943_01898	8.672e-167	534.0	COG0661@1|root,COG0661@2|Bacteria,4NDUP@976|Bacteroidetes,47JE8@768503|Cytophagia	976|Bacteroidetes	S	unusual protein kinase	-	-	-	-	-	-	-	-	-	-	-	-	ABC1,APH
BYD3_k127_3098774_4	643867.Ftrac_1566	3.727e-59	212.0	28HM7@1|root,2Z7VU@2|Bacteria,4NGV1@976|Bacteroidetes,47PTW@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_3098774_7	1183438.GKIL_0846	8.618e-06	52.0	COG0457@1|root,COG0457@2|Bacteria	1183438.GKIL_0846|-	S	peptidyl-tyrosine sulfation	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_3135750_18	714943.Mucpa_2551	1.483e-05	47.0	2EIUI@1|root,33CJV@2|Bacteria,4NYR6@976|Bacteroidetes	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_3135750_11	1237149.C900_04527	2.919e-68	241.0	COG4235@1|root,COG4235@2|Bacteria,4PMDP@976|Bacteroidetes,47Y29@768503|Cytophagia	976|Bacteroidetes	O	Tetratricopeptide repeat	-	-	-	-	-	-	-	-	-	-	-	-	TPR_19
BYD3_k127_3135750_17	1121373.KB903620_gene2207	2.531e-43	160.0	COG0776@1|root,COG0776@2|Bacteria,4NT0D@976|Bacteroidetes,47QBN@768503|Cytophagia	976|Bacteroidetes	L	Belongs to the bacterial histone-like protein family	hupA	-	-	ko:K03530	-	-	-	-	ko00000,ko03032,ko03036,ko03400	-	-	-	Bac_DNA_binding
BYD3_k127_3135750_7	929562.Emtol_2241	2.183e-110	367.0	COG1194@1|root,COG1194@2|Bacteria,4NDZY@976|Bacteroidetes,47KTH@768503|Cytophagia	976|Bacteroidetes	L	A G-specific adenine glycosylase	mutY	-	-	ko:K03575	ko03410,map03410	-	-	-	ko00000,ko00001,ko01000,ko03400	-	-	-	EndIII_4Fe-2S,HhH-GPD,NUDIX_4
BYD3_k127_3135750_14	1237149.C900_04530	2.625e-59	208.0	COG0629@1|root,COG0629@2|Bacteria,4NQBK@976|Bacteroidetes,47QZT@768503|Cytophagia	976|Bacteroidetes	L	Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism	ssb	-	-	ko:K03111	ko03030,ko03430,ko03440,map03030,map03430,map03440	-	-	-	ko00000,ko00001,ko03029,ko03032,ko03400	-	-	-	SSB
BYD3_k127_3135750_8	1237149.C900_04531	4.585e-109	367.0	COG1253@1|root,COG1253@2|Bacteria,4NDZ7@976|Bacteroidetes,47JUX@768503|Cytophagia	976|Bacteroidetes	S	TIGRFAM gliding motility-associated protein GldE	gldE	-	-	-	-	-	-	-	-	-	-	-	CBS,CorC_HlyC,DUF21
BYD3_k127_3135750_10	1237149.C900_04532	4.8e-79	268.0	293VW@1|root,2ZRB2@2|Bacteria,4NMK7@976|Bacteroidetes,47PUM@768503|Cytophagia	976|Bacteroidetes	S	TIGRFAM gliding motility-associated lipoprotein GldD	gldD	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_3135750_2	1237149.C900_00754	5.585e-230	719.0	COG0624@1|root,COG0624@2|Bacteria,4NFGE@976|Bacteroidetes,47JN6@768503|Cytophagia	976|Bacteroidetes	E	PFAM Peptidase family M20 M25 M40	dapE	-	-	-	-	-	-	-	-	-	-	-	M20_dimer,Peptidase_M20
BYD3_k127_3135750_5	1239962.C943_01411	7.809e-162	515.0	COG1533@1|root,COG1533@2|Bacteria,4NE62@976|Bacteroidetes,47M4W@768503|Cytophagia	976|Bacteroidetes	L	SMART Elongator protein 3 MiaB NifB	-	-	-	-	-	-	-	-	-	-	-	-	Radical_SAM
BYD3_k127_3135750_9	1237149.C900_04631	1.855e-90	307.0	COG2515@1|root,COG2515@2|Bacteria,4NEP9@976|Bacteroidetes,47JNZ@768503|Cytophagia	976|Bacteroidetes	E	1-aminocyclopropane-1-carboxylate deaminase	acdS	-	3.5.99.7	ko:K01505	ko00270,map00270	-	R00997	RC00419	ko00000,ko00001,ko01000	-	-	-	PALP
BYD3_k127_3135750_16	926562.Oweho_3286	7.08e-48	178.0	COG1514@1|root,COG1514@2|Bacteria,4NTUH@976|Bacteroidetes,1I48G@117743|Flavobacteriia	976|Bacteroidetes	J	2',5' RNA ligase	-	-	-	-	-	-	-	-	-	-	-	-	2_5_RNA_ligase2
BYD3_k127_3135750_1	1408813.AYMG01000003_gene2872	1.407e-255	793.0	COG0114@1|root,COG0114@2|Bacteria,4NEQP@976|Bacteroidetes,1IPCY@117747|Sphingobacteriia	976|Bacteroidetes	C	Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate	fumC	-	4.2.1.2	ko:K01679	ko00020,ko00620,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko04934,ko05200,ko05211,map00020,map00620,map00720,map01100,map01110,map01120,map01130,map01200,map04934,map05200,map05211	M00009,M00011,M00173,M00376	R01082	RC00443	ko00000,ko00001,ko00002,ko01000	-	-	-	FumaraseC_C,Lyase_1
BYD3_k127_3135750_12	1237149.C900_04546	2.512e-66	232.0	2DPU6@1|root,333E2@2|Bacteria,4NW9K@976|Bacteroidetes,47RVJ@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_3135750_3	153721.MYP_4405	8.394e-218	689.0	COG0608@1|root,COG0608@2|Bacteria,4NDW1@976|Bacteroidetes,47MAC@768503|Cytophagia	976|Bacteroidetes	L	single-stranded-DNA-specific exonuclease RecJ	recJ	-	-	ko:K07462	ko03410,ko03430,ko03440,map03410,map03430,map03440	-	-	-	ko00000,ko00001,ko01000,ko03400	-	-	-	DHH,DHHA1
BYD3_k127_3135750_6	1279009.ADICEAN_01942	2.414e-123	400.0	COG1137@1|root,COG1137@2|Bacteria,4NDUG@976|Bacteroidetes,47KI2@768503|Cytophagia	976|Bacteroidetes	S	ABC transporter	lptB	-	-	ko:K06861	ko02010,map02010	M00320	-	-	ko00000,ko00001,ko00002,ko01000,ko02000	1.B.42.1	-	-	ABC_tran,BCA_ABC_TP_C
BYD3_k127_3135750_0	1237149.C900_04542	3.038e-260	809.0	COG0318@1|root,COG0318@2|Bacteria,4PKJY@976|Bacteroidetes,47KAH@768503|Cytophagia	976|Bacteroidetes	IQ	PFAM GH3 auxin-responsive promoter	-	-	-	-	-	-	-	-	-	-	-	-	GH3
BYD3_k127_3135750_13	1237149.C900_04630	1.606e-59	212.0	COG4843@1|root,COG4843@2|Bacteria,4NRH5@976|Bacteroidetes,47PXG@768503|Cytophagia	976|Bacteroidetes	S	protein conserved in bacteria (DUF2179)	-	-	-	-	-	-	-	-	-	-	-	-	DUF2179
BYD3_k127_3135750_4	1237149.C900_04629	2.864e-201	636.0	COG1066@1|root,COG1066@2|Bacteria,4NEYA@976|Bacteroidetes,47K0I@768503|Cytophagia	976|Bacteroidetes	O	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function	radA	-	-	ko:K04485	-	-	-	-	ko00000,ko03400	-	-	-	AAA_25,ATPase,ChlI
BYD3_k127_3135750_15	1227739.Hsw_0759	3.492e-58	211.0	COG1305@1|root,COG1305@2|Bacteria,4NEKT@976|Bacteroidetes,47NCY@768503|Cytophagia	976|Bacteroidetes	E	Domain of Unknown Function with PDB structure (DUF3857)	-	-	-	-	-	-	-	-	-	-	-	-	DUF3857,DUF3858,Transglut_core
BYD3_k127_315569_11	1237149.C900_04324	2.65e-08	61.0	COG2114@1|root,COG2114@2|Bacteria	2|Bacteria	T	Pfam Adenylate and Guanylate cyclase catalytic domain	-	-	4.6.1.1	ko:K01768	ko00230,ko02025,ko04113,ko04213,map00230,map02025,map04113,map04213	M00695	R00089,R00434	RC00295	ko00000,ko00001,ko00002,ko01000	-	-	-	CHASE2,Guanylate_cyc
BYD3_k127_315569_3	991.IW20_15365	2.914e-97	333.0	COG1538@1|root,COG1538@2|Bacteria,4NF4X@976|Bacteroidetes,1HYTI@117743|Flavobacteriia	976|Bacteroidetes	MU	Outer membrane efflux protein	-	-	-	-	-	-	-	-	-	-	-	-	OEP
BYD3_k127_315569_0	525373.HMPREF0766_12331	0.0	1628.0	COG0841@1|root,COG0841@2|Bacteria,4NDZG@976|Bacteroidetes,1INYC@117747|Sphingobacteriia	976|Bacteroidetes	V	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family	-	-	-	ko:K18138	ko01501,ko01503,map01501,map01503	M00647,M00699,M00718	-	-	ko00000,ko00001,ko00002,ko01504,ko02000	2.A.6.2	-	-	ACR_tran
BYD3_k127_315569_4	525373.HMPREF0766_12330	7.39e-92	313.0	COG0845@1|root,COG0845@2|Bacteria,4NF3H@976|Bacteroidetes,1ISID@117747|Sphingobacteriia	976|Bacteroidetes	M	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family	-	-	-	ko:K03585	ko01501,ko01503,map01501,map01503	M00646,M00647,M00699,M00718	-	-	ko00000,ko00001,ko00002,ko01504,ko02000,ko03036	2.A.6.2,8.A.1.6	-	-	HlyD_D23
BYD3_k127_315569_5	1121904.ARBP01000001_gene5650	4.042e-86	303.0	COG3209@1|root,COG3209@2|Bacteria,4NWG7@976|Bacteroidetes,47VGU@768503|Cytophagia	976|Bacteroidetes	M	COG3209 Rhs family protein	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_315569_8	1166018.FAES_pFAES01111	4.887e-42	161.0	COG4977@1|root,COG4977@2|Bacteria	2|Bacteria	K	sequence-specific DNA binding	-	-	-	ko:K07506	-	-	-	-	ko00000,ko03000	-	-	-	AraC_binding,HTH_18
BYD3_k127_315569_6	1237149.C900_02411	2.318e-77	265.0	COG2207@1|root,COG2207@2|Bacteria,4NM5G@976|Bacteroidetes,47QJ8@768503|Cytophagia	976|Bacteroidetes	K	PFAM Bacterial regulatory helix-turn-helix proteins, AraC family	-	-	-	-	-	-	-	-	-	-	-	-	HTH_18
BYD3_k127_315569_1	760192.Halhy_5751	1.157e-157	505.0	2CK59@1|root,335GM@2|Bacteria,4NYUR@976|Bacteroidetes,1IWCN@117747|Sphingobacteriia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_315569_10	714943.Mucpa_7008	1.246e-08	66.0	2CH44@1|root,32S57@2|Bacteria,4NZMQ@976|Bacteroidetes,1IY49@117747|Sphingobacteriia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_315569_7	1123248.KB893328_gene932	2.896e-56	210.0	2CYFR@1|root,32T44@2|Bacteria,4P6IN@976|Bacteroidetes,1IZDY@117747|Sphingobacteriia	976|Bacteroidetes	S	Protein of unknown function (DUF998)	-	-	-	-	-	-	-	-	-	-	-	-	DUF998
BYD3_k127_315569_2	1250232.JQNJ01000001_gene1855	7.985e-130	426.0	COG0446@1|root,COG0446@2|Bacteria,4NFUW@976|Bacteroidetes,1HY2U@117743|Flavobacteriia	976|Bacteroidetes	S	Pyridine nucleotide-disulphide oxidoreductase	-	-	-	-	-	-	-	-	-	-	-	-	Pyr_redox_2
BYD3_k127_315569_9	1461694.ATO9_22535	2.565e-37	147.0	COG2197@1|root,COG2909@1|root,COG2197@2|Bacteria,COG2909@2|Bacteria	2|Bacteria	K	trisaccharide binding	-	-	-	-	-	-	-	-	-	-	-	-	AAA_16,GerE
BYD3_k127_3160335_1	869213.JCM21142_72922	2.592e-21	100.0	COG3292@1|root,COG3292@2|Bacteria,4PMED@976|Bacteroidetes,47Y31@768503|Cytophagia	976|Bacteroidetes	T	Two component regulator propeller	-	-	-	-	-	-	-	-	-	-	-	-	Reg_prop
BYD3_k127_3160335_0	1237149.C900_05644	9.409e-224	718.0	COG0577@1|root,COG0577@2|Bacteria,4NDUK@976|Bacteroidetes,47N0R@768503|Cytophagia	976|Bacteroidetes	V	MacB-like periplasmic core domain	-	-	-	ko:K02004	-	M00258	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	FtsX,MacB_PCD
BYD3_k127_3160335_2	1237149.C900_02052	6.696e-16	78.0	COG1595@1|root,COG1595@2|Bacteria,4NMYQ@976|Bacteroidetes,47PII@768503|Cytophagia	976|Bacteroidetes	K	TIGRFAM RNA polymerase sigma factor, sigma-70 family	-	-	-	ko:K03088	-	-	-	-	ko00000,ko03021	-	-	-	Sigma70_r2,Sigma70_r4_2
BYD3_k127_3183603_4	1121004.ATVC01000025_gene201	7.259e-08	53.0	COG2201@1|root,COG2201@2|Bacteria,1MWCN@1224|Proteobacteria,2VI13@28216|Betaproteobacteria,2KQ0T@206351|Neisseriales	206351|Neisseriales	NT	catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR	cheB	-	3.1.1.61,3.5.1.44	ko:K03412	ko02020,ko02030,map02020,map02030	M00506	-	-	ko00000,ko00001,ko00002,ko01000,ko02022,ko02035	-	-	-	CheB_methylest,Response_reg
BYD3_k127_3183603_0	269799.Gmet_2420	3.639e-85	290.0	COG1352@1|root,COG1352@2|Bacteria,1MU6W@1224|Proteobacteria,42MR2@68525|delta/epsilon subdivisions,2WKKH@28221|Deltaproteobacteria,43SBQ@69541|Desulfuromonadales	28221|Deltaproteobacteria	H	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP	cheR34H	-	2.1.1.80	ko:K00575	ko02020,ko02030,map02020,map02030	-	-	-	ko00000,ko00001,ko01000,ko02035	-	-	-	CheR,CheR_N,Response_reg
BYD3_k127_3183603_2	1121904.ARBP01000079_gene6051	7.529e-25	108.0	COG0745@1|root,COG0745@2|Bacteria	1121904.ARBP01000079_gene6051|-	T	phosphorelay signal transduction system	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_3183603_1	316067.Geob_3768	2.426e-37	153.0	COG4313@1|root,COG4313@2|Bacteria,1NW7I@1224|Proteobacteria,42ZUG@68525|delta/epsilon subdivisions,2WVAI@28221|Deltaproteobacteria	28221|Deltaproteobacteria	C	Putative MetA-pathway of phenol degradation	-	-	-	-	-	-	-	-	-	-	-	-	Phenol_MetA_deg
BYD3_k127_3183603_3	1121373.KB903663_gene1085	4.96e-12	77.0	COG4251@1|root,COG4251@2|Bacteria,4NI5R@976|Bacteroidetes,47QJA@768503|Cytophagia	976|Bacteroidetes	T	GHKL domain	-	-	-	-	-	-	-	-	-	-	-	-	HATPase_c,HisKA,MASE1,PAS_9
BYD3_k127_3188103_1	1237149.C900_02722	9.725e-114	375.0	COG4775@1|root,COG4775@2|Bacteria,4NE6Z@976|Bacteroidetes,47JEC@768503|Cytophagia	976|Bacteroidetes	M	Outer membrane protein assembly complex, YaeT protein	yaeT	-	-	ko:K07277	-	-	-	-	ko00000,ko02000,ko03029	1.B.33	-	-	Bac_surface_Ag,POTRA
BYD3_k127_3188103_3	1237149.C900_02721	4.157e-70	242.0	COG2825@1|root,COG2825@2|Bacteria,4NH46@976|Bacteroidetes,47PD1@768503|Cytophagia	976|Bacteroidetes	M	PFAM Outer membrane protein (OmpH-like)	skp	-	-	ko:K06142	-	-	-	-	ko00000	-	-	-	OmpH
BYD3_k127_3188103_4	1237149.C900_02720	2.58e-52	190.0	COG2825@1|root,COG2825@2|Bacteria,4NQHJ@976|Bacteroidetes,47QWE@768503|Cytophagia	976|Bacteroidetes	M	PFAM Outer membrane protein (OmpH-like)	ompH	-	-	ko:K06142	-	-	-	-	ko00000	-	-	-	OmpH
BYD3_k127_3188103_2	926549.KI421517_gene1841	2.57e-86	295.0	COG1619@1|root,COG1619@2|Bacteria,4NF5Q@976|Bacteroidetes,47KS4@768503|Cytophagia	976|Bacteroidetes	V	peptidase U61 LD-carboxypeptidase A	ykfA	-	3.4.17.13	ko:K01297	-	-	-	-	ko00000,ko01000,ko01002,ko01011	-	-	-	Peptidase_S66
BYD3_k127_3188103_0	1124780.ANNU01000025_gene3411	1.654e-140	457.0	COG2081@1|root,COG2081@2|Bacteria,4NFME@976|Bacteroidetes,47JD1@768503|Cytophagia	976|Bacteroidetes	S	TIGRFAM flavoprotein, HI0933 family	yhiN	-	-	ko:K07007	-	-	-	-	ko00000	-	-	-	HI0933_like
BYD3_k127_3194604_1	1237149.C900_05895	1.206e-98	356.0	COG4733@1|root,COG4932@1|root,COG4733@2|Bacteria,COG4932@2|Bacteria,4NXBV@976|Bacteroidetes,47SGI@768503|Cytophagia	976|Bacteroidetes	M	Fibronectin type 3 domain	-	-	-	-	-	-	-	-	-	-	-	-	fn3
BYD3_k127_3194604_0	643867.Ftrac_1104	2.484e-120	398.0	COG4249@1|root,COG4249@2|Bacteria,4NKHX@976|Bacteroidetes,47UFX@768503|Cytophagia	976|Bacteroidetes	S	Caspase domain	-	-	-	-	-	-	-	-	-	-	-	-	FGE-sulfatase,Peptidase_C14,TPR_16
BYD3_k127_3209_0	760192.Halhy_5277	2.695e-261	855.0	COG0642@1|root,COG0745@1|root,COG2207@1|root,COG3292@1|root,COG0745@2|Bacteria,COG2205@2|Bacteria,COG2207@2|Bacteria,COG3292@2|Bacteria,4NDXU@976|Bacteroidetes	976|Bacteroidetes	T	Histidine kinase	-	-	-	-	-	-	-	-	-	-	-	-	HATPase_c,HTH_18,HisKA,Reg_prop,Response_reg,Y_Y_Y
BYD3_k127_3209_3	1267211.KI669560_gene471	2.587e-157	516.0	COG0308@1|root,COG0308@2|Bacteria,4NGUB@976|Bacteroidetes	976|Bacteroidetes	E	peptidase M1	-	-	-	-	-	-	-	-	-	-	-	-	Peptidase_M1
BYD3_k127_3209_2	1123277.KB893180_gene2461	3.833e-174	553.0	COG3525@1|root,COG3525@2|Bacteria,4NGV2@976|Bacteroidetes,47TJT@768503|Cytophagia	976|Bacteroidetes	G	Glycosyl hydrolase family 20, catalytic domain	-	-	-	-	-	-	-	-	-	-	-	-	Glyco_hydro_20
BYD3_k127_3209_5	926549.KI421517_gene3225	1.198e-51	190.0	COG1556@1|root,COG1556@2|Bacteria,4NQSF@976|Bacteroidetes,47QGX@768503|Cytophagia	976|Bacteroidetes	S	LUD domain	lutC	-	-	ko:K00782	-	-	-	-	ko00000	-	-	-	LUD_dom
BYD3_k127_3209_1	391596.PBAL39_19404	1.188e-228	715.0	COG1139@1|root,COG1139@2|Bacteria,4NEBT@976|Bacteroidetes,1IR6B@117747|Sphingobacteriia	976|Bacteroidetes	C	4Fe-4S ferredoxin	-	-	-	ko:K18929	-	-	-	-	ko00000	-	-	-	DUF3390,Fer4_8,LUD_dom
BYD3_k127_3209_4	485917.Phep_2946	5.167e-123	398.0	COG0247@1|root,COG0247@2|Bacteria,4NIMP@976|Bacteroidetes,1INN8@117747|Sphingobacteriia	976|Bacteroidetes	C	Fe-S oxidoreductase	-	-	-	ko:K18928	-	-	-	-	ko00000	-	-	-	CCG
BYD3_k127_3209_6	1237149.C900_05252	2.013e-39	148.0	COG2755@1|root,COG2755@2|Bacteria,4NE58@976|Bacteroidetes,47P77@768503|Cytophagia	976|Bacteroidetes	E	GDSL-like Lipase/Acylhydrolase family	tesA	-	3.1.1.5	ko:K10804	ko01040,map01040	-	-	-	ko00000,ko00001,ko01000,ko01004	-	-	-	Lipase_GDSL_2
BYD3_k127_3210338_1	714943.Mucpa_4312	5.266e-86	295.0	COG2972@1|root,COG2972@2|Bacteria,4NHG3@976|Bacteroidetes,1INSV@117747|Sphingobacteriia	976|Bacteroidetes	T	Histidine kinase	-	-	-	-	-	-	-	-	-	-	-	-	HATPase_c_5,His_kinase
BYD3_k127_3210338_6	485918.Cpin_6588	4.889e-23	104.0	2EC7G@1|root,33661@2|Bacteria,4NWXP@976|Bacteroidetes,1IU01@117747|Sphingobacteriia	976|Bacteroidetes	S	Domain of unknown function (DUF4288)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4288
BYD3_k127_3210338_3	925409.KI911562_gene1783	1.719e-56	209.0	COG4758@1|root,COG4758@2|Bacteria,4NQRE@976|Bacteroidetes,1ISAD@117747|Sphingobacteriia	976|Bacteroidetes	S	membrane protein (DUF2154)	-	-	-	-	-	-	-	-	-	-	-	-	DUF2154
BYD3_k127_3210338_2	1250232.JQNJ01000001_gene2756	3.299e-57	205.0	COG1670@1|root,COG1670@2|Bacteria,4NMRH@976|Bacteroidetes,1I1FG@117743|Flavobacteriia	976|Bacteroidetes	J	Domain of unknown function (DUF4202)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4202
BYD3_k127_3210338_4	1305737.JAFX01000001_gene3205	2.947e-46	171.0	COG0394@1|root,COG0394@2|Bacteria,4NNQZ@976|Bacteroidetes,47R52@768503|Cytophagia	976|Bacteroidetes	T	Low molecular weight phosphotyrosine protein phosphatase	ptpA	-	3.1.3.48	ko:K01104	-	-	-	-	ko00000,ko01000	-	-	-	LMWPc
BYD3_k127_3210338_0	1237149.C900_03741	3.235e-126	409.0	COG1024@1|root,COG1024@2|Bacteria,4NFEM@976|Bacteroidetes,47JUC@768503|Cytophagia	976|Bacteroidetes	I	Belongs to the enoyl-CoA hydratase isomerase family	-	-	4.2.1.17	ko:K01692,ko:K01715	ko00071,ko00280,ko00281,ko00310,ko00360,ko00362,ko00380,ko00410,ko00627,ko00640,ko00650,ko00903,ko00930,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00071,map00280,map00281,map00310,map00360,map00362,map00380,map00410,map00627,map00640,map00650,map00903,map00930,map01100,map01110,map01120,map01130,map01200,map01212	M00032,M00087	R03026,R03045,R04137,R04170,R04204,R04224,R04738,R04740,R04744,R04746,R04749,R05595,R06411,R06412,R06942,R08093	RC00831,RC00834,RC01086,RC01095,RC01098,RC01103,RC01217,RC02115	ko00000,ko00001,ko00002,ko01000	-	-	-	ECH_1
BYD3_k127_3210338_5	1237149.C900_03740	1.994e-34	137.0	28J2U@1|root,2Z8Z5@2|Bacteria,4NHYM@976|Bacteroidetes,47RCK@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_3278175_0	1121904.ARBP01000011_gene1484	2.114e-104	379.0	COG2911@1|root,COG2911@2|Bacteria,4NF7F@976|Bacteroidetes,47JE0@768503|Cytophagia	976|Bacteroidetes	M	PFAM Family of	-	-	-	-	-	-	-	-	-	-	-	-	TamB
BYD3_k127_3278175_2	880071.Fleli_1087	1.428e-20	98.0	COG4775@1|root,COG4775@2|Bacteria,4NE80@976|Bacteroidetes,47KRB@768503|Cytophagia	976|Bacteroidetes	M	Outer membrane protein protective antigen OMA87	-	-	-	-	-	-	-	-	-	-	-	-	Bac_surface_Ag
BYD3_k127_3278175_1	468059.AUHA01000006_gene2854	3.863e-44	172.0	COG4775@1|root,COG4775@2|Bacteria,4NE80@976|Bacteroidetes,1IPP9@117747|Sphingobacteriia	976|Bacteroidetes	M	Outer membrane protein protective antigen OMA87	-	-	-	-	-	-	-	-	-	-	-	-	Bac_surface_Ag
BYD3_k127_3280767_7	1237149.C900_02379	2.11e-98	323.0	COG0556@1|root,COG0556@2|Bacteria,4NE6E@976|Bacteroidetes,47KBV@768503|Cytophagia	976|Bacteroidetes	L	damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage	uvrB	-	-	ko:K03702	ko03420,map03420	-	-	-	ko00000,ko00001,ko03400	-	-	-	Helicase_C,ResIII,UVR,UvrB
BYD3_k127_3280767_9	1124780.ANNU01000006_gene2811	2.949e-77	265.0	COG0169@1|root,COG0169@2|Bacteria,4NEBJ@976|Bacteroidetes,47JZN@768503|Cytophagia	976|Bacteroidetes	E	PFAM Shikimate dehydrogenase substrate binding domain	aroE	-	1.1.1.25	ko:K00014	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	M00022	R02413	RC00206	ko00000,ko00001,ko00002,ko01000	-	-	-	Shikimate_dh_N
BYD3_k127_3280767_6	1124780.ANNU01000006_gene2810	1.377e-99	333.0	COG2035@1|root,COG2035@2|Bacteria,4NFKI@976|Bacteroidetes,47MKT@768503|Cytophagia	976|Bacteroidetes	S	Domain of unknown function (DUF368)	-	-	-	ko:K08974	-	-	-	-	ko00000	-	-	-	DUF368
BYD3_k127_3280767_5	1237149.C900_02373	2.055e-138	443.0	COG1809@1|root,COG1809@2|Bacteria,4NEHT@976|Bacteroidetes,47MRM@768503|Cytophagia	976|Bacteroidetes	S	PFAM (2R)-phospho-3-sulfolactate synthase ComA	-	-	4.4.1.19	ko:K08097	ko00680,ko01120,map00680,map01120	M00358	R07476	RC01799	ko00000,ko00001,ko00002,ko01000	-	-	-	ComA
BYD3_k127_3280767_0	1237149.C900_02372	1.343e-213	671.0	COG0457@1|root,COG0457@2|Bacteria,4NG1I@976|Bacteroidetes,47M8A@768503|Cytophagia	976|Bacteroidetes	NU	PFAM Tetratricopeptide repeat	-	-	-	-	-	-	-	-	-	-	-	-	TPR_1,TPR_16,TPR_19,TPR_2,TPR_6,TPR_7,TPR_8
BYD3_k127_3280767_8	1237149.C900_02371	2.369e-83	287.0	COG0451@1|root,COG0451@2|Bacteria,4NFZH@976|Bacteroidetes,47M93@768503|Cytophagia	976|Bacteroidetes	M	PFAM NAD dependent epimerase dehydratase family	-	-	1.1.1.219	ko:K00091	-	-	-	-	ko00000,ko01000	-	-	-	Epimerase,NAD_binding_4
BYD3_k127_3280767_10	1237149.C900_02370	1.62e-74	257.0	COG4464@1|root,COG4464@2|Bacteria,4NMUT@976|Bacteroidetes,47PBY@768503|Cytophagia	976|Bacteroidetes	GM	capsular polysaccharide biosynthesis protein	-	-	3.1.3.48	ko:K01104	-	-	-	-	ko00000,ko01000	-	-	-	-
BYD3_k127_3280767_1	1237149.C900_02369	3.276e-206	666.0	COG0489@1|root,COG3206@1|root,COG0489@2|Bacteria,COG3206@2|Bacteria,4NEXU@976|Bacteroidetes,47JQC@768503|Cytophagia	976|Bacteroidetes	DM	TIGRFAM capsular exopolysaccharide family	-	-	-	-	-	-	-	-	-	-	-	-	AAA_31,CbiA,GNVR,Wzz
BYD3_k127_3280767_11	1237149.C900_02368	1.508e-66	235.0	COG1596@1|root,COG1596@2|Bacteria,4NPJB@976|Bacteroidetes,47Q04@768503|Cytophagia	976|Bacteroidetes	M	Polysaccharide biosynthesis/export protein	-	-	-	ko:K01991	ko02026,map02026	-	-	-	ko00000,ko00001,ko02000	1.B.18	-	-	Poly_export
BYD3_k127_3280767_12	1117379.BABA_01690	1.036e-05	48.0	COG1898@1|root,COG1898@2|Bacteria,1TRVB@1239|Firmicutes,4HFQB@91061|Bacilli,1ZFCU@1386|Bacillus	91061|Bacilli	M	Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4- hexulose	-	-	5.1.3.13	ko:K01790	ko00521,ko00523,ko01130,map00521,map00523,map01130	M00793	R06514	RC01531	ko00000,ko00001,ko00002,ko01000	-	-	-	dTDP_sugar_isom
BYD3_k127_3280767_3	1237149.C900_02366	4.333e-152	489.0	COG0438@1|root,COG0438@2|Bacteria,4NEX8@976|Bacteroidetes,47KFQ@768503|Cytophagia	976|Bacteroidetes	M	Glycosyl transferase 4-like	-	-	-	ko:K13004	-	-	-	-	ko00000,ko01000,ko01003,ko01005	-	GT4	-	Glyco_trans_1_4,Glyco_trans_4_2,Glyco_transf_4,Glycos_transf_1
BYD3_k127_3280767_4	1237149.C900_02365	4.82e-147	475.0	COG2262@1|root,COG2262@2|Bacteria,4NF0P@976|Bacteroidetes,47JGI@768503|Cytophagia	976|Bacteroidetes	S	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis	hflX	-	-	ko:K03665	-	-	-	-	ko00000,ko03009	-	-	-	GTP-bdg_M,GTP-bdg_N,MMR_HSR1
BYD3_k127_3280767_2	1237149.C900_00735	6.086e-153	491.0	COG0457@1|root,COG4995@1|root,COG0457@2|Bacteria,COG4995@2|Bacteria,4NKPZ@976|Bacteroidetes,47N11@768503|Cytophagia	976|Bacteroidetes	S	CHAT domain	-	-	-	-	-	-	-	-	-	-	-	-	CHAT,TPR_10,TPR_12
BYD3_k127_3321118_0	1237149.C900_01573	0.0	1021.0	COG2183@1|root,COG2183@2|Bacteria,4NETD@976|Bacteroidetes,47MKQ@768503|Cytophagia	976|Bacteroidetes	K	TIGRFAM competence protein ComEA helix-hairpin-helix repeat region	yhgF	-	-	ko:K06959	-	-	-	-	ko00000	-	-	-	HHH_3,S1,Tex_N,Tex_YqgF
BYD3_k127_3321118_1	1191523.MROS_1348	8.427e-57	202.0	COG1803@1|root,COG1803@2|Bacteria	2|Bacteria	G	methylglyoxal synthase activity	mgsA	GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006081,GO:0008150,GO:0008152,GO:0008929,GO:0009058,GO:0009438,GO:0009987,GO:0016829,GO:0016835,GO:0016838,GO:0019242,GO:0042180,GO:0042181,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046184,GO:0071704,GO:1901576	4.2.3.3	ko:K01734	ko00640,ko01120,map00640,map01120	-	R01016	RC00424	ko00000,ko00001,ko01000	-	-	iECUMN_1333.ECUMN_1153,iYL1228.KPN_00992	MGS
BYD3_k127_3321118_2	1237149.C900_04232	6.979e-31	124.0	COG3832@1|root,COG3832@2|Bacteria,4NNY1@976|Bacteroidetes,47R94@768503|Cytophagia	976|Bacteroidetes	S	Pfam Activator of Hsp90 ATPase homolog 1-like protein	-	-	-	-	-	-	-	-	-	-	-	-	AHSA1
BYD3_k127_3322523_2	1408473.JHXO01000007_gene740	4.068e-18	95.0	2ET8I@1|root,33KSM@2|Bacteria,4NZEX@976|Bacteroidetes	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_3322523_1	1484460.JSWG01000003_gene775	5.61e-32	138.0	COG2207@1|root,COG2207@2|Bacteria,4NIJV@976|Bacteroidetes,1HZK0@117743|Flavobacteriia	976|Bacteroidetes	K	AraC family	-	-	-	-	-	-	-	-	-	-	-	-	HTH_18,Reg_prop,Y_Y_Y
BYD3_k127_3322523_0	926549.KI421517_gene4122	1.414e-96	318.0	COG3507@1|root,COG3507@2|Bacteria,4NEWE@976|Bacteroidetes,47MJY@768503|Cytophagia	976|Bacteroidetes	G	Belongs to the glycosyl hydrolase 43 family	xynB	-	-	-	-	-	-	-	-	-	-	-	Glyco_hydro_43
BYD3_k127_3350754_1	1131812.JQMS01000001_gene2384	5.635e-57	207.0	COG0784@1|root,COG1352@1|root,COG2201@1|root,COG5002@1|root,COG0784@2|Bacteria,COG1352@2|Bacteria,COG2201@2|Bacteria,COG5002@2|Bacteria,4PKNJ@976|Bacteroidetes,1IJIK@117743|Flavobacteriia,2P0R5@237|Flavobacterium	976|Bacteroidetes	NT	Methyltransferase, chemotaxis proteins	-	-	2.1.1.80,3.1.1.61	ko:K00575,ko:K13924	ko02020,ko02030,map02020,map02030	M00506	-	-	ko00000,ko00001,ko00002,ko01000,ko02022,ko02035	-	-	-	CheB_methylest,CheR,CheR_N,HATPase_c,HisKA,PAS,PAS_10,PAS_3,PAS_4,PAS_9,Response_reg
BYD3_k127_3350754_0	1121481.AUAS01000018_gene434	1.676e-78	275.0	COG0628@1|root,COG0628@2|Bacteria,4NFHZ@976|Bacteroidetes,47KDN@768503|Cytophagia	976|Bacteroidetes	S	AI-2E family transporter	-	-	-	-	-	-	-	-	-	-	-	-	AI-2E_transport
BYD3_k127_3350754_3	1121481.AUAS01000007_gene1112	2.593e-05	48.0	COG0784@1|root,COG0784@2|Bacteria,4P519@976|Bacteroidetes,47XW2@768503|Cytophagia	976|Bacteroidetes	T	cheY-homologous receiver domain	-	-	-	-	-	-	-	-	-	-	-	-	Response_reg
BYD3_k127_3350754_2	1123248.KB893319_gene4085	3.286e-21	95.0	COG0784@1|root,COG0784@2|Bacteria,4P519@976|Bacteroidetes	976|Bacteroidetes	T	cheY-homologous receiver domain	-	-	-	-	-	-	-	-	-	-	-	-	Response_reg
BYD3_k127_3369408_6	1237149.C900_04961	2.495e-112	370.0	COG0190@1|root,COG0190@2|Bacteria,4NEJP@976|Bacteroidetes,47K0S@768503|Cytophagia	976|Bacteroidetes	F	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate	folD	GO:0003674,GO:0003824,GO:0004477,GO:0004488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006730,GO:0008150,GO:0008152,GO:0009987,GO:0016491,GO:0016645,GO:0016646,GO:0016787,GO:0016810,GO:0016814,GO:0019238,GO:0044237,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0055114	1.5.1.5,3.5.4.9	ko:K01491	ko00670,ko00720,ko01100,ko01120,ko01200,map00670,map00720,map01100,map01120,map01200	M00140,M00377	R01220,R01655	RC00202,RC00578	ko00000,ko00001,ko00002,ko01000	-	-	-	THF_DHG_CYH,THF_DHG_CYH_C
BYD3_k127_3369408_9	153721.MYP_4653	4.452e-89	298.0	COG0602@1|root,COG0602@2|Bacteria,4NESC@976|Bacteroidetes,47MB1@768503|Cytophagia	976|Bacteroidetes	H	Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7- carboxy-7-deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds	queE	-	4.3.99.3	ko:K10026	ko00790,ko01100,map00790,map01100	-	R10002	RC02989	ko00000,ko00001,ko01000,ko03016	-	-	-	Fer4_14,Radical_SAM
BYD3_k127_3369408_8	1408473.JHXO01000008_gene2778	2.95e-107	357.0	COG0147@1|root,COG0147@2|Bacteria,4NFKB@976|Bacteroidetes,2FMRN@200643|Bacteroidia	976|Bacteroidetes	EH	para-aminobenzoate synthase component I	pabB	-	2.6.1.85	ko:K01665	ko00790,map00790	-	R01716	RC00010,RC01418	ko00000,ko00001,ko01000	-	-	-	Chorismate_bind
BYD3_k127_3369408_11	563040.Saut_1774	1.287e-40	158.0	COG0115@1|root,COG0115@2|Bacteria,1N3ZD@1224|Proteobacteria,42TNN@68525|delta/epsilon subdivisions,2YPU5@29547|Epsilonproteobacteria	29547|Epsilonproteobacteria	EH	Branched-chain amino acid aminotransferase	-	-	4.1.3.38	ko:K02619	ko00790,map00790	-	R05553	RC01843,RC02148	ko00000,ko00001,ko01000	-	-	-	Aminotran_4
BYD3_k127_3369408_2	1237149.C900_04960	3.704e-210	671.0	COG0823@1|root,COG2885@1|root,COG0823@2|Bacteria,COG2885@2|Bacteria,4NE6G@976|Bacteroidetes,47MTM@768503|Cytophagia	976|Bacteroidetes	MU	Belongs to the ompA family	-	-	-	-	-	-	-	-	-	-	-	-	OmpA,PD40,TPR_16,TPR_2,TPR_8
BYD3_k127_3369408_0	1123277.KB893185_gene3043	0.0	1277.0	COG1629@1|root,COG4771@2|Bacteria,4NDU8@976|Bacteroidetes,47K6G@768503|Cytophagia	976|Bacteroidetes	P	PFAM TonB-dependent Receptor Plug	-	-	-	-	-	-	-	-	-	-	-	-	CarbopepD_reg_2,Plug,TonB_dep_Rec
BYD3_k127_3369408_3	1048983.EL17_12130	9.315e-170	546.0	COG0521@1|root,COG0521@2|Bacteria,4NMFH@976|Bacteroidetes,47MJN@768503|Cytophagia	976|Bacteroidetes	H	Starch-binding associating with outer membrane	-	-	-	-	-	-	-	-	-	-	-	-	SusD-like_2
BYD3_k127_3369408_12	1048983.EL17_12135	3.328e-26	114.0	2AAEA@1|root,30ZQK@2|Bacteria,4NNFH@976|Bacteroidetes,47PZ5@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_3369408_10	1124780.ANNU01000019_gene1745	3.518e-74	250.0	COG0720@1|root,COG0720@2|Bacteria,4NNY0@976|Bacteroidetes,47PVC@768503|Cytophagia	976|Bacteroidetes	H	TIGRFAM 6-pyruvoyl tetrahydropterin synthase QueD family protein	-	-	4.1.2.50,4.2.3.12	ko:K01737	ko00790,ko01100,map00790,map01100	M00842,M00843	R04286,R09959	RC01117,RC02846,RC02847	ko00000,ko00001,ko00002,ko01000,ko03016	-	-	-	PTPS
BYD3_k127_3369408_5	1237149.C900_00199	1.123e-124	410.0	COG0763@1|root,COG0763@2|Bacteria,4NDW3@976|Bacteroidetes,47JDC@768503|Cytophagia	976|Bacteroidetes	M	Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell	lpxB	-	2.4.1.182	ko:K00748	ko00540,ko01100,map00540,map01100	M00060	R04606	RC00005,RC00059	ko00000,ko00001,ko00002,ko01000,ko01003,ko01005	-	GT19	-	LpxB
BYD3_k127_3369408_1	1237149.C900_00196	1.137e-223	698.0	COG1219@1|root,COG1219@2|Bacteria,4NE1B@976|Bacteroidetes,47JDR@768503|Cytophagia	976|Bacteroidetes	O	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP	clpX	GO:0000166,GO:0003674,GO:0003824,GO:0004176,GO:0005488,GO:0005524,GO:0006508,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008233,GO:0009056,GO:0009057,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0019538,GO:0030163,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0042623,GO:0043167,GO:0043168,GO:0043170,GO:0044238,GO:0051301,GO:0070011,GO:0071704,GO:0097159,GO:0097367,GO:0140096,GO:1901265,GO:1901363,GO:1901564,GO:1901565,GO:1901575	-	ko:K03544	ko04112,map04112	-	-	-	ko00000,ko00001,ko03110	-	-	-	AAA_2,ClpB_D2-small,zf-C4_ClpX
BYD3_k127_3369408_7	1237149.C900_00195	4.472e-109	357.0	COG0740@1|root,COG0740@2|Bacteria,4NE20@976|Bacteroidetes,47K60@768503|Cytophagia	976|Bacteroidetes	OU	Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins	clpP	-	3.4.21.92	ko:K01358	ko04112,ko04212,map04112,map04212	-	-	-	ko00000,ko00001,ko01000,ko01002	-	-	-	CLP_protease
BYD3_k127_3369408_4	1237149.C900_00194	1.253e-147	479.0	COG0544@1|root,COG0544@2|Bacteria,4NE99@976|Bacteroidetes,47KTD@768503|Cytophagia	976|Bacteroidetes	O	Trigger factor	tig	-	-	ko:K03545	-	-	-	-	ko00000	-	-	-	Trigger_C,Trigger_N
BYD3_k127_3369408_13	1123008.KB905696_gene2848	2.09e-07	54.0	2DT5I@1|root,33IT8@2|Bacteria,4NZMY@976|Bacteroidetes	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_3380449_0	760192.Halhy_1517	2.796e-320	999.0	COG4888@1|root,COG4888@2|Bacteria,4NEE8@976|Bacteroidetes,1IUUN@117747|Sphingobacteriia	976|Bacteroidetes	S	ASPIC and UnbV	-	-	-	-	-	-	-	-	-	-	-	-	UnbV_ASPIC,VCBS
BYD3_k127_3380449_1	388413.ALPR1_19728	1.077e-223	705.0	COG0561@1|root,COG0561@2|Bacteria,4PMMP@976|Bacteroidetes	976|Bacteroidetes	S	Pfam:SusD	-	-	-	ko:K21572	-	-	-	-	ko00000,ko02000	8.A.46.1,8.A.46.3	-	-	SusD-like_3,SusD_RagB
BYD3_k127_3380449_2	388413.ALPR1_19733	1.675e-183	585.0	COG4206@1|root,COG4206@2|Bacteria,4P258@976|Bacteroidetes,47Y44@768503|Cytophagia	976|Bacteroidetes	P	PFAM TonB-dependent Receptor Plug	-	-	-	-	-	-	-	-	-	-	-	-	CarbopepD_reg_2,Plug,TonB_dep_Rec
BYD3_k127_3382026_3	643867.Ftrac_2404	4.54e-62	228.0	COG2203@1|root,COG2203@2|Bacteria,4NICW@976|Bacteroidetes,47NI3@768503|Cytophagia	976|Bacteroidetes	T	Domain present in phytochromes and cGMP-specific phosphodiesterases.	-	-	-	-	-	-	-	-	-	-	-	-	GAF_2,PAS_9
BYD3_k127_3382026_1	1237149.C900_02781	4.138e-112	368.0	COG4589@1|root,COG4589@2|Bacteria,4NIPM@976|Bacteroidetes,47KPM@768503|Cytophagia	976|Bacteroidetes	S	Belongs to the CDS family	cdsA	-	2.7.7.41	ko:K00981	ko00564,ko01100,ko01110,ko04070,map00564,map01100,map01110,map04070	M00093	R01799	RC00002	ko00000,ko00001,ko00002,ko01000	-	-	-	CTP_transf_1
BYD3_k127_3382026_2	1237149.C900_02779	1.184e-64	234.0	COG1266@1|root,COG1266@2|Bacteria,4NHE1@976|Bacteroidetes,47JZ8@768503|Cytophagia	976|Bacteroidetes	S	PFAM CAAX amino terminal protease family	-	-	-	ko:K07052	-	-	-	-	ko00000	-	-	-	Abi
BYD3_k127_3382026_0	761193.Runsl_0390	2.265e-170	539.0	COG0042@1|root,COG0042@2|Bacteria,4NEN4@976|Bacteroidetes,47JGV@768503|Cytophagia	976|Bacteroidetes	J	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines	dus	-	-	-	-	-	-	-	-	-	-	-	Dus
BYD3_k127_3382026_4	1237149.C900_02777	1.643e-25	109.0	COG0697@1|root,COG0697@2|Bacteria,4NEHX@976|Bacteroidetes,47MRR@768503|Cytophagia	976|Bacteroidetes	EG	PFAM EamA-like transporter family	fjo11	-	-	-	-	-	-	-	-	-	-	-	EamA
BYD3_k127_3383109_2	518766.Rmar_0958	7.25e-76	260.0	COG3828@1|root,COG3828@2|Bacteria,4PND4@976|Bacteroidetes	976|Bacteroidetes	S	Domain of Unknown Function (DUF1080)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1080
BYD3_k127_3383109_1	96561.Dole_1788	3.604e-76	286.0	COG1319@1|root,COG1653@1|root,COG1319@2|Bacteria,COG1653@2|Bacteria,1N4S6@1224|Proteobacteria,43BRE@68525|delta/epsilon subdivisions,2X729@28221|Deltaproteobacteria,2MNRP@213118|Desulfobacterales	1224|Proteobacteria	G	Conserved repeat domain	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_3383109_0	1121904.ARBP01000005_gene4823	3.088e-112	374.0	28MAS@1|root,2ZAPE@2|Bacteria,4NJ31@976|Bacteroidetes,47TP8@768503|Cytophagia	976|Bacteroidetes	S	Protein of unknown function, DUF481	-	-	-	-	-	-	-	-	-	-	-	-	DUF481
BYD3_k127_3383109_3	700598.Niako_5413	4.409e-53	196.0	2C3WA@1|root,2Z8P1@2|Bacteria,4NW8R@976|Bacteroidetes	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_3383109_4	700598.Niako_1610	3.206e-16	80.0	COG0673@1|root,COG0673@2|Bacteria,4NEN5@976|Bacteroidetes,1IRBM@117747|Sphingobacteriia	976|Bacteroidetes	S	Oxidoreductase	-	-	-	-	-	-	-	-	-	-	-	-	GFO_IDH_MocA
BYD3_k127_3385231_2	471854.Dfer_3084	5.535e-88	295.0	COG1273@1|root,COG1273@2|Bacteria,4NHHQ@976|Bacteroidetes,47PE5@768503|Cytophagia	976|Bacteroidetes	L	With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD	ku	-	-	ko:K10979	ko03450,map03450	-	-	-	ko00000,ko00001,ko03400	-	-	-	Ku
BYD3_k127_3385231_1	471854.Dfer_5355	1.943e-158	508.0	COG2982@1|root,COG2982@2|Bacteria,4NIE2@976|Bacteroidetes,47M87@768503|Cytophagia	976|Bacteroidetes	M	Domain of Unknown Function (DUF748)	-	-	-	-	-	-	-	-	-	-	-	-	DUF748
BYD3_k127_3385231_0	485918.Cpin_5049	3.207e-184	593.0	COG0665@1|root,COG0723@1|root,COG0665@2|Bacteria,COG0723@2|Bacteria,4NFT6@976|Bacteroidetes,1IQRJ@117747|Sphingobacteriia	976|Bacteroidetes	CE	PFAM FAD dependent oxidoreductase	-	-	-	-	-	-	-	-	-	-	-	-	DAO,Rieske
BYD3_k127_3385231_3	269798.CHU_2835	1.358e-69	237.0	COG1415@1|root,COG1415@2|Bacteria,4NG24@976|Bacteroidetes,47KQY@768503|Cytophagia	976|Bacteroidetes	S	Protein of unknown function (DUF763)	-	-	-	ko:K09003	-	-	-	-	ko00000	-	-	-	DUF763
BYD3_k127_3391247_1	1237149.C900_04801	8.381e-132	428.0	COG0252@1|root,COG0252@2|Bacteria,4NE2Z@976|Bacteroidetes,47KWG@768503|Cytophagia	976|Bacteroidetes	EJ	TIGRFAM L-asparaginases, type I	ansA	-	3.5.1.1	ko:K01424	ko00250,ko00460,ko01100,ko01110,map00250,map00460,map01100,map01110	-	R00485	RC00010,RC02798	ko00000,ko00001,ko01000	-	-	-	Asparaginase
BYD3_k127_3391247_2	1237149.C900_04802	1.085e-109	362.0	COG0084@1|root,COG0084@2|Bacteria,4NEVW@976|Bacteroidetes,47KE3@768503|Cytophagia	976|Bacteroidetes	L	TIGRFAM hydrolase, TatD family	tatD	-	-	ko:K03424	-	-	-	-	ko00000,ko01000	-	-	-	TatD_DNase
BYD3_k127_3391247_7	1268240.ATFI01000003_gene5117	1.553e-25	110.0	COG0818@1|root,COG0818@2|Bacteria,4NQ39@976|Bacteroidetes,2FSJ8@200643|Bacteroidia,4AQWN@815|Bacteroidaceae	976|Bacteroidetes	M	Psort location CytoplasmicMembrane, score	dgkA	-	2.7.1.107,2.7.1.66	ko:K00887,ko:K00901	ko00550,ko00561,ko00564,ko01100,ko01110,ko04070,ko04072,ko05231,map00550,map00561,map00564,map01100,map01110,map04070,map04072,map05231	-	R02240,R05626	RC00002,RC00017	ko00000,ko00001,ko01000	-	-	-	DAGK_prokar
BYD3_k127_3391247_4	1286632.P278_32000	1.798e-77	272.0	COG0707@1|root,COG0707@2|Bacteria,4NFRJ@976|Bacteroidetes,1HXSS@117743|Flavobacteriia	976|Bacteroidetes	M	glycosyltransferase	-	-	-	-	-	-	-	-	-	-	-	-	Glyco_tran_28_C,Glyco_trans_1_3
BYD3_k127_3391247_5	929562.Emtol_2802	2.303e-67	235.0	COG0726@1|root,COG0726@2|Bacteria,4NM7D@976|Bacteroidetes,47PE1@768503|Cytophagia	976|Bacteroidetes	G	PFAM Polysaccharide deacetylase	pgdA_1	-	-	-	-	-	-	-	-	-	-	-	Polysacc_deac_1
BYD3_k127_3391247_0	1237149.C900_04805	1.793e-176	561.0	COG2208@1|root,COG2208@2|Bacteria,4NI98@976|Bacteroidetes,47KA0@768503|Cytophagia	976|Bacteroidetes	KT	PFAM Stage II sporulation protein E (SpoIIE)	-	-	3.1.3.3	ko:K07315	-	-	-	-	ko00000,ko01000,ko03021	-	-	-	SpoIIE
BYD3_k127_3391247_6	1185876.BN8_02968	4.716e-67	242.0	COG1215@1|root,COG1215@2|Bacteria,4NG9C@976|Bacteroidetes,47KYN@768503|Cytophagia	976|Bacteroidetes	M	PFAM Glycosyl transferase family 2	-	-	-	-	-	-	-	-	-	-	-	-	Glyco_tranf_2_3,Glycos_transf_2
BYD3_k127_3391247_3	1237149.C900_04808	3.472e-85	286.0	COG0817@1|root,COG0817@2|Bacteria,4NDV6@976|Bacteroidetes,47PA6@768503|Cytophagia	976|Bacteroidetes	L	Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group	ruvC	-	3.1.22.4	ko:K01159	ko03440,map03440	-	-	-	ko00000,ko00001,ko01000,ko03400	-	-	-	RuvC
BYD3_k127_3391247_8	1279009.ADICEAN_01177	6.787e-15	77.0	COG3209@1|root,COG4932@1|root,COG3209@2|Bacteria,COG4932@2|Bacteria,4PKBQ@976|Bacteroidetes,47XXU@768503|Cytophagia	976|Bacteroidetes	M	SprB repeat	-	-	-	-	-	-	-	-	-	-	-	-	CHU_C,SdrD_B,SprB
BYD3_k127_3393027_1	1237149.C900_00339	4.272e-128	415.0	COG1216@1|root,COG1216@2|Bacteria,4NK0K@976|Bacteroidetes,47PID@768503|Cytophagia	976|Bacteroidetes	S	Psort location Cytoplasmic, score	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_3393027_0	1237149.C900_00335	5.942e-265	836.0	COG0489@1|root,COG3206@1|root,COG0489@2|Bacteria,COG3206@2|Bacteria,4NEXU@976|Bacteroidetes,47JQC@768503|Cytophagia	976|Bacteroidetes	DM	TIGRFAM capsular exopolysaccharide family	-	-	-	-	-	-	-	-	-	-	-	-	AAA_31,CbiA,GNVR,Wzz
BYD3_k127_3401799_3	1237149.C900_00541	7.836e-24	102.0	COG0589@1|root,COG0589@2|Bacteria,4NFZ5@976|Bacteroidetes,47PIA@768503|Cytophagia	976|Bacteroidetes	T	Universal stress protein	-	-	-	-	-	-	-	-	-	-	-	-	Usp
BYD3_k127_3401799_0	1237149.C900_04408	0.0	1873.0	COG1703@1|root,COG1884@1|root,COG2185@1|root,COG1703@2|Bacteria,COG1884@2|Bacteria,COG2185@2|Bacteria,4NFHX@976|Bacteroidetes,47KS7@768503|Cytophagia	976|Bacteroidetes	EI	Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly	icmF	-	5.4.99.13	ko:K11942	-	-	-	-	ko00000,ko01000	-	-	-	ArgK,B12-binding,MM_CoA_mutase
BYD3_k127_3401799_2	746697.Aeqsu_0193	4.707e-37	144.0	COG1525@1|root,COG1525@2|Bacteria,4NT0S@976|Bacteroidetes,1I47N@117743|Flavobacteriia	976|Bacteroidetes	L	nuclease	lpxP	-	3.1.31.1	ko:K01174	-	-	-	-	ko00000,ko01000	-	-	-	SNase
BYD3_k127_3401799_1	1166018.FAES_4190	7.242e-101	344.0	COG3356@1|root,COG3356@2|Bacteria,4NGDG@976|Bacteroidetes,47JVE@768503|Cytophagia	976|Bacteroidetes	S	Neutral/alkaline non-lysosomal ceramidase, N-terminal	-	-	-	-	-	-	-	-	-	-	-	-	Ceramidase_alk
BYD3_k127_3402917_3	1237149.C900_03773	9.813e-50	180.0	COG4974@1|root,COG4974@2|Bacteria,4NE0E@976|Bacteroidetes,47JU5@768503|Cytophagia	976|Bacteroidetes	D	Tyrosine recombinase XerC	xerC	-	-	ko:K04763	-	-	-	-	ko00000,ko03036	-	-	-	Phage_int_SAM_1,Phage_integrase
BYD3_k127_3402917_2	1120965.AUBV01000008_gene2085	1.162e-60	212.0	COG0757@1|root,COG0757@2|Bacteria,4NNHU@976|Bacteroidetes,47PUX@768503|Cytophagia	976|Bacteroidetes	E	Catalyzes a trans-dehydration via an enolate intermediate	aroQ	-	4.2.1.10	ko:K03786	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	M00022	R03084	RC00848	ko00000,ko00001,ko00002,ko01000	-	-	-	DHquinase_II
BYD3_k127_3402917_1	1121904.ARBP01000005_gene4599	1.009e-97	331.0	COG4857@1|root,COG4857@2|Bacteria,4NHKI@976|Bacteroidetes,47JME@768503|Cytophagia	976|Bacteroidetes	S	Phosphotransferase enzyme family	mtnK	-	2.7.1.100	ko:K00899	ko00270,ko01100,map00270,map01100	M00034	R04143	RC00002,RC00078	ko00000,ko00001,ko00002,ko01000	-	-	-	APH
BYD3_k127_3402917_0	1237149.C900_03771	7.507e-124	406.0	COG1932@1|root,COG1932@2|Bacteria,4PM2C@976|Bacteroidetes,47Y07@768503|Cytophagia	976|Bacteroidetes	EH	Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine	-	-	2.6.1.52	ko:K00831	ko00260,ko00680,ko00750,ko01100,ko01120,ko01130,ko01200,ko01230,map00260,map00680,map00750,map01100,map01120,map01130,map01200,map01230	M00020,M00124	R04173,R05085	RC00006,RC00036	ko00000,ko00001,ko00002,ko01000,ko01007	-	-	-	Aminotran_5
BYD3_k127_3414273_7	244582.JQAK01000001_gene1991	8.631e-09	57.0	COG4875@1|root,COG4875@2|Bacteria,1RD75@1224|Proteobacteria,2UEDN@28211|Alphaproteobacteria	28211|Alphaproteobacteria	S	Calcium/calmodulin dependent protein kinase II association domain	-	-	-	-	-	-	-	-	-	-	-	-	CaMKII_AD,DUF4440
BYD3_k127_3414273_2	929703.KE386491_gene1574	9.993e-102	339.0	COG0330@1|root,COG0330@2|Bacteria,4NEP5@976|Bacteroidetes,47N07@768503|Cytophagia	976|Bacteroidetes	O	prohibitin homologues	-	-	-	ko:K04088	-	M00742	-	-	ko00000,ko00002,ko01000	-	-	-	Band_7
BYD3_k127_3414273_3	1237149.C900_05035	1.984e-74	256.0	COG2824@1|root,COG2824@2|Bacteria,4NEFZ@976|Bacteroidetes	976|Bacteroidetes	P	Alkylphosphonate utilization operon protein phna	phnA	-	-	ko:K06193	ko01120,map01120	-	-	-	ko00000	-	-	-	PhnA,PhnA_Zn_Ribbon
BYD3_k127_3414273_1	1356852.N008_18335	8.817e-133	428.0	COG0568@1|root,COG0568@2|Bacteria,4NEBF@976|Bacteroidetes,47JZ7@768503|Cytophagia	976|Bacteroidetes	K	Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released	rpoD	-	-	ko:K03086	-	-	-	-	ko00000,ko03021	-	-	-	Sigma70_r1_2,Sigma70_r2,Sigma70_r3,Sigma70_r4
BYD3_k127_3414273_0	1237149.C900_04344	7.633e-205	644.0	COG0156@1|root,COG0156@2|Bacteria,4NFRY@976|Bacteroidetes,47KDV@768503|Cytophagia	976|Bacteroidetes	E	PFAM Aminotransferase class I and II	-	-	2.3.1.29	ko:K00639	ko00260,map00260	-	R00371	RC00004,RC00394	ko00000,ko00001,ko01000,ko01007	-	-	-	Aminotran_1_2
BYD3_k127_3414273_4	700598.Niako_3486	3.89e-61	218.0	COG0664@1|root,COG0664@2|Bacteria,4NFB1@976|Bacteroidetes,1IQHB@117747|Sphingobacteriia	976|Bacteroidetes	K	- catabolite gene activator and regulatory subunit of cAMP-dependent protein	-	-	-	ko:K01420	-	-	-	-	ko00000,ko03000	-	-	-	HTH_Crp_2,cNMP_binding
BYD3_k127_3414273_5	1346330.M472_03940	9.066e-53	192.0	COG2265@1|root,COG2265@2|Bacteria,4NJ04@976|Bacteroidetes,1J12U@117747|Sphingobacteriia	976|Bacteroidetes	J	Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT)	-	-	-	-	-	-	-	-	-	-	-	-	Methyltransf_31
BYD3_k127_3414273_6	395495.Lcho_0333	4.844e-26	109.0	COG0840@1|root,COG2202@1|root,COG0840@2|Bacteria,COG2202@2|Bacteria,1MU9B@1224|Proteobacteria,2VGZ8@28216|Betaproteobacteria,1KISZ@119065|unclassified Burkholderiales	28216|Betaproteobacteria	T	chemotaxis sensory transducer	-	-	-	ko:K03406,ko:K03776,ko:K05874	ko02020,ko02030,map02020,map02030	-	-	-	ko00000,ko00001,ko02035	-	-	-	4HB_MCP_1,HAMP,MCPsignal,PAS,PAS_3,PAS_8,sCache_2
BYD3_k127_3447152_4	1408473.JHXO01000002_gene3887	6.653e-36	141.0	COG0852@1|root,COG0852@2|Bacteria,4NPGA@976|Bacteroidetes	976|Bacteroidetes	C	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient	-	-	1.6.5.3	ko:K00332	ko00190,ko01100,map00190,map01100	M00144	R11945	RC00061	ko00000,ko00001,ko00002,ko01000	3.D.1	-	-	Complex1_30kDa
BYD3_k127_3447152_2	1211813.CAPH01000009_gene87	3.951e-80	276.0	COG0377@1|root,COG0377@2|Bacteria,4NFKT@976|Bacteroidetes,2FMK8@200643|Bacteroidia	976|Bacteroidetes	C	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient	nuoB	-	1.6.5.3	ko:K00331	ko00190,ko01100,map00190,map01100	M00144	R11945	RC00061	ko00000,ko00001,ko00002,ko01000	3.D.1	-	-	Oxidored_q6
BYD3_k127_3447152_6	1408473.JHXO01000002_gene3889	4.098e-29	121.0	COG0838@1|root,COG0838@2|Bacteria,4NQET@976|Bacteroidetes,2FTGA@200643|Bacteroidia	976|Bacteroidetes	C	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient	nuoA	GO:0003674,GO:0003824,GO:0003954,GO:0005575,GO:0008137,GO:0008150,GO:0008152,GO:0016020,GO:0016491,GO:0016651,GO:0016655,GO:0030964,GO:0032991,GO:0044425,GO:0050136,GO:0055114,GO:0098796,GO:1902494	1.6.5.3	ko:K00330	ko00190,ko01100,map00190,map01100	M00144	R11945	RC00061	ko00000,ko00001,ko00002,ko01000	3.D.1	-	-	Oxidored_q4
BYD3_k127_3447152_0	867902.Ornrh_0091	0.0	1333.0	COG0574@1|root,COG1080@1|root,COG0574@2|Bacteria,COG1080@2|Bacteria,4NEHE@976|Bacteroidetes,1HY80@117743|Flavobacteriia	976|Bacteroidetes	G	Belongs to the PEP-utilizing enzyme family	ppdK	-	2.7.9.1	ko:K01006	ko00620,ko00710,ko00720,ko01100,ko01120,ko01200,map00620,map00710,map00720,map01100,map01120,map01200	M00169,M00171,M00172,M00173	R00206	RC00002,RC00015	ko00000,ko00001,ko00002,ko01000	-	-	-	PEP-utilizers,PEP-utilizers_C,PPDK_N
BYD3_k127_3447152_1	1122605.KB893626_gene2600	3.689e-145	462.0	COG2227@1|root,COG2227@2|Bacteria	2|Bacteria	H	3-demethylubiquinone-9 3-O-methyltransferase activity	-	-	-	-	-	-	-	-	-	-	-	-	Methyltransf_11,Methyltransf_23,Methyltransf_25
BYD3_k127_3447152_3	1121286.AUMT01000006_gene3576	4.29e-36	144.0	COG0664@1|root,COG0664@2|Bacteria,4NM4K@976|Bacteroidetes,1IIWS@117743|Flavobacteriia	976|Bacteroidetes	T	Cyclic nucleotide-monophosphate binding domain	-	-	-	-	-	-	-	-	-	-	-	-	Crp,cNMP_binding
BYD3_k127_3447152_5	926554.KI912672_gene79	1.569e-32	130.0	COG5485@1|root,COG5485@2|Bacteria	2|Bacteria	S	SnoaL-like polyketide cyclase	-	-	-	-	-	-	-	-	-	-	-	-	SnoaL
BYD3_k127_3458237_0	1237149.C900_00005	0.0	1032.0	COG2987@1|root,COG2987@2|Bacteria,4NF2P@976|Bacteroidetes,47K5S@768503|Cytophagia	976|Bacteroidetes	E	Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate	hutU	-	4.2.1.49	ko:K01712	ko00340,ko01100,map00340,map01100	M00045	R02914	RC00804	ko00000,ko00001,ko00002,ko01000	-	-	-	Urocanase,Urocanase_C,Urocanase_N
BYD3_k127_3458237_5	743722.Sph21_3119	1.675e-18	93.0	COG3637@1|root,COG3637@2|Bacteria,4NV8Z@976|Bacteroidetes,1IUHA@117747|Sphingobacteriia	976|Bacteroidetes	M	Outer membrane protein beta-barrel domain	-	-	-	-	-	-	-	-	-	-	-	-	OMP_b-brl
BYD3_k127_3458237_3	1237149.C900_00012	5.47e-58	208.0	COG3637@1|root,COG3637@2|Bacteria,4NR9K@976|Bacteroidetes,47QK5@768503|Cytophagia	976|Bacteroidetes	M	Outer membrane protein beta-barrel domain	-	-	-	-	-	-	-	-	-	-	-	-	OMP_b-brl,OMP_b-brl_2
BYD3_k127_3458237_1	153721.MYP_765	3.988e-194	613.0	COG0162@1|root,COG0162@2|Bacteria,4NF19@976|Bacteroidetes,47JXG@768503|Cytophagia	976|Bacteroidetes	J	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)	tyrS	GO:0003674,GO:0003824,GO:0004812,GO:0004831,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016070,GO:0016874,GO:0016875,GO:0019752,GO:0034641,GO:0034660,GO:0043038,GO:0043039,GO:0043170,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564	6.1.1.1	ko:K01866	ko00970,map00970	M00359,M00360	R02918	RC00055,RC00523	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029	-	-	-	S4,tRNA-synt_1b
BYD3_k127_3458237_4	700598.Niako_6657	1.334e-48	181.0	COG0288@1|root,COG0288@2|Bacteria,4NEJT@976|Bacteroidetes,1IQ7Q@117747|Sphingobacteriia	976|Bacteroidetes	P	Reversible hydration of carbon dioxide	-	-	4.2.1.1	ko:K01673	ko00910,map00910	-	R00132,R10092	RC02807	ko00000,ko00001,ko01000	-	-	-	Pro_CA
BYD3_k127_3458237_2	1123248.KB893331_gene3753	6.369e-174	559.0	COG0659@1|root,COG0659@2|Bacteria,4NE9G@976|Bacteroidetes,1INYY@117747|Sphingobacteriia	976|Bacteroidetes	P	COGs COG0659 Sulfate permease and related transporter (MFS superfamily)	-	-	-	ko:K03321	-	-	-	-	ko00000,ko02000	2.A.53.3	-	-	Sulfate_transp
BYD3_k127_3458857_1	926549.KI421517_gene1580	7.729e-80	268.0	COG4974@1|root,COG4974@2|Bacteria,4NE0E@976|Bacteroidetes,47JU5@768503|Cytophagia	976|Bacteroidetes	D	Tyrosine recombinase XerC	xerC	-	-	ko:K04763	-	-	-	-	ko00000,ko03036	-	-	-	Phage_int_SAM_1,Phage_integrase
BYD3_k127_3458857_4	1129374.AJE_05936	8.896e-05	51.0	2C852@1|root,32YB2@2|Bacteria,1RH28@1224|Proteobacteria,1SA5Z@1236|Gammaproteobacteria	1236|Gammaproteobacteria	S	Domain of unknown function (DUF4136)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4136
BYD3_k127_3458857_0	1122226.AUHX01000004_gene1749	6.638e-145	466.0	COG0167@1|root,COG0167@2|Bacteria,4NDVB@976|Bacteroidetes,1HY59@117743|Flavobacteriia	976|Bacteroidetes	F	Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor	pyrD	-	1.3.5.2,1.3.98.1	ko:K00226,ko:K00254	ko00240,ko01100,map00240,map01100	M00051	R01867,R01868	RC00051	ko00000,ko00001,ko00002,ko01000	-	-	-	DHO_dh
BYD3_k127_3458857_3	36875.HQ29_01470	4.075e-06	57.0	COG3637@1|root,COG3637@2|Bacteria,4NRZA@976|Bacteroidetes,2FQ3Q@200643|Bacteroidia	976|Bacteroidetes	M	COG NOG19089 non supervised orthologous group	-	-	-	-	-	-	-	-	-	-	-	-	OMP_b-brl,OMP_b-brl_2
BYD3_k127_3458857_2	926562.Oweho_2107	1.386e-15	84.0	COG3291@1|root,COG4447@1|root,COG3291@2|Bacteria,COG4447@2|Bacteria,4NEJ8@976|Bacteroidetes,1HYZP@117743|Flavobacteriia,2PBG6@246874|Cryomorphaceae	976|Bacteroidetes	S	PKD domain	-	-	-	-	-	-	-	-	-	-	-	-	DUF11,PKD
BYD3_k127_3480739_3	761193.Runsl_5543	5.246e-218	681.0	COG4244@1|root,COG4244@2|Bacteria,4NG6K@976|Bacteroidetes,47K0Y@768503|Cytophagia	976|Bacteroidetes	G	Protein of unknown function (DUF1549)	-	-	-	-	-	-	-	-	-	-	-	-	PSCyt1,PSCyt2,PSD1
BYD3_k127_3480739_1	1089547.KB913013_gene2560	1.635e-277	857.0	COG3119@1|root,COG3119@2|Bacteria,4NGYE@976|Bacteroidetes,47MMC@768503|Cytophagia	976|Bacteroidetes	P	Protein of unknown function (DUF1501)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1501
BYD3_k127_3480739_6	760192.Halhy_5193	6.249e-11	70.0	COG4319@1|root,COG4319@2|Bacteria	2|Bacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	DUF2911,DUF4440,SnoaL_3
BYD3_k127_3480739_4	269798.CHU_2450	7.058e-116	378.0	COG1073@1|root,COG1073@2|Bacteria,4NGCE@976|Bacteroidetes,47PN6@768503|Cytophagia	976|Bacteroidetes	S	Serine aminopeptidase, S33	-	-	-	ko:K06889	-	-	-	-	ko00000	-	-	-	Hydrolase_4
BYD3_k127_3480739_5	1116472.MGMO_112c00020	1.334e-113	384.0	COG0491@1|root,COG0491@2|Bacteria,1R6GR@1224|Proteobacteria,1SHXM@1236|Gammaproteobacteria,1XEX1@135618|Methylococcales	135618|Methylococcales	S	Metallo-beta-lactamase superfamily	-	-	-	-	-	-	-	-	-	-	-	-	Lactamase_B
BYD3_k127_3480739_7	8010.XP_010873227.1	0.0002032	51.0	COG0666@1|root,KOG0504@2759|Eukaryota,38CMX@33154|Opisthokonta,3BH8T@33208|Metazoa,3CZ5V@33213|Bilateria,483IX@7711|Chordata,48WTM@7742|Vertebrata,49SM1@7898|Actinopterygii	33208|Metazoa	S	Tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2	tanc2	GO:0000003,GO:0000768,GO:0001655,GO:0001667,GO:0002064,GO:0002065,GO:0002066,GO:0003006,GO:0003674,GO:0005198,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005912,GO:0006928,GO:0006949,GO:0006996,GO:0007010,GO:0007275,GO:0007276,GO:0007281,GO:0007292,GO:0007297,GO:0007298,GO:0007520,GO:0008150,GO:0008307,GO:0009653,GO:0009888,GO:0009986,GO:0009987,GO:0010631,GO:0010927,GO:0014902,GO:0016043,GO:0016477,GO:0019953,GO:0022412,GO:0022414,GO:0022607,GO:0030016,GO:0030017,GO:0030018,GO:0030029,GO:0030036,GO:0030054,GO:0030154,GO:0030239,GO:0030707,GO:0030855,GO:0031032,GO:0031674,GO:0032501,GO:0032502,GO:0032504,GO:0032989,GO:0035295,GO:0040011,GO:0042692,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043292,GO:0044085,GO:0044422,GO:0044424,GO:0044444,GO:0044449,GO:0044464,GO:0044703,GO:0045214,GO:0048468,GO:0048477,GO:0048513,GO:0048609,GO:0048646,GO:0048731,GO:0048856,GO:0048869,GO:0048870,GO:0050839,GO:0051146,GO:0051179,GO:0051674,GO:0051704,GO:0055001,GO:0055002,GO:0060429,GO:0061061,GO:0061326,GO:0061327,GO:0070161,GO:0070925,GO:0071840,GO:0072001,GO:0072002,GO:0090130,GO:0090132,GO:0097435,GO:0099080,GO:0099081,GO:0099512	-	-	-	-	-	-	-	-	-	-	Ank_2,Ank_4
BYD3_k127_3480739_0	1123278.KB893545_gene4780	0.0	1148.0	COG3590@1|root,COG3590@2|Bacteria,4NEYB@976|Bacteroidetes,47JHJ@768503|Cytophagia	976|Bacteroidetes	O	PFAM peptidase M13	pepO	-	-	ko:K07386	-	-	-	-	ko00000,ko01000,ko01002	-	-	-	Peptidase_M13,Peptidase_M13_N
BYD3_k127_3480739_2	1121875.KB907547_gene3465	3.41e-263	829.0	COG2010@1|root,COG4993@1|root,COG2010@2|Bacteria,COG4993@2|Bacteria,4NFK0@976|Bacteroidetes	976|Bacteroidetes	G	Pyrrolo-quinoline quinone	-	-	-	-	-	-	-	-	-	-	-	-	PQQ
BYD3_k127_3481355_6	1121904.ARBP01000013_gene370	8.27e-12	66.0	COG1129@1|root,COG1129@2|Bacteria,4PKJP@976|Bacteroidetes,47JPJ@768503|Cytophagia	976|Bacteroidetes	G	ABC transporter	-	-	3.6.3.17	ko:K10441	ko02010,map02010	M00212	-	-	ko00000,ko00001,ko00002,ko01000,ko02000	3.A.1.2.1,3.A.1.2.13,3.A.1.2.19	-	-	ABC_tran
BYD3_k127_3481355_5	1185876.BN8_05996	1.375e-36	141.0	COG1129@1|root,COG1129@2|Bacteria,4PKJP@976|Bacteroidetes,47JPJ@768503|Cytophagia	976|Bacteroidetes	G	ABC transporter	-	-	3.6.3.17	ko:K10441	ko02010,map02010	M00212	-	-	ko00000,ko00001,ko00002,ko01000,ko02000	3.A.1.2.1,3.A.1.2.13,3.A.1.2.19	-	-	ABC_tran
BYD3_k127_3481355_2	761193.Runsl_3639	4.225e-144	464.0	COG0673@1|root,COG0673@2|Bacteria,4NJEP@976|Bacteroidetes,47NE5@768503|Cytophagia	976|Bacteroidetes	S	Oxidoreductase family, NAD-binding Rossmann fold	-	-	-	-	-	-	-	-	-	-	-	-	GFO_IDH_MocA,GFO_IDH_MocA_C
BYD3_k127_3481355_0	760192.Halhy_1307	8.285e-224	701.0	COG2730@1|root,COG2730@2|Bacteria,4NF3J@976|Bacteroidetes,1IRPS@117747|Sphingobacteriia	976|Bacteroidetes	G	Putative collagen-binding domain of a collagenase	-	-	-	-	-	-	-	-	-	-	-	-	Collagen_bind_2,DUF4038
BYD3_k127_3481355_1	761193.Runsl_3636	4.196e-155	492.0	COG0287@1|root,COG0287@2|Bacteria,4NGI9@976|Bacteroidetes,47JFK@768503|Cytophagia	976|Bacteroidetes	E	Phosphogluconate dehydrogenase (decarboxylating) C-term	-	-	-	-	-	-	-	-	-	-	-	-	NAD_binding_2,PGDH_C
BYD3_k127_3481355_3	1288963.ADIS_3118	4.526e-71	249.0	COG1082@1|root,COG1082@2|Bacteria,4NPBS@976|Bacteroidetes,47Q6G@768503|Cytophagia	976|Bacteroidetes	G	Xylose isomerase-like TIM barrel	-	-	-	-	-	-	-	-	-	-	-	-	AP_endonuc_2
BYD3_k127_3481355_4	1434325.AZQN01000002_gene890	2.321e-62	225.0	COG2207@1|root,COG2207@2|Bacteria,4NE6T@976|Bacteroidetes,47KCW@768503|Cytophagia	976|Bacteroidetes	K	Transcriptional regulator, AraC family	-	-	-	-	-	-	-	-	-	-	-	-	AraC_binding,Cupin_2,HTH_18
BYD3_k127_3482350_1	1123248.KB893317_gene4339	1.637e-160	517.0	COG1793@1|root,COG3285@1|root,COG1793@2|Bacteria,COG3285@2|Bacteria,4NESR@976|Bacteroidetes,1IQI9@117747|Sphingobacteriia	976|Bacteroidetes	L	DNA ligase	-	-	6.5.1.1	ko:K01971	ko03450,map03450	-	R00381	RC00005	ko00000,ko00001,ko01000,ko03400	-	-	-	DNA_ligase_A_C,DNA_ligase_A_M,LigD_N
BYD3_k127_3482350_2	700598.Niako_7149	1.149e-55	198.0	2BXJ3@1|root,32JAR@2|Bacteria,4NQKG@976|Bacteroidetes,1IZDA@117747|Sphingobacteriia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	Lipocalin_5
BYD3_k127_3482350_4	1197906.CAJQ02000009_gene3622	3.345e-38	148.0	COG2764@1|root,COG2764@2|Bacteria,1RF5T@1224|Proteobacteria,2U922@28211|Alphaproteobacteria,3JY6M@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily	-	-	-	ko:K04750	-	-	-	-	ko00000	-	-	-	Glyoxalase
BYD3_k127_3482350_0	1120968.AUBX01000011_gene3084	2.283e-196	621.0	COG4773@1|root,COG4773@2|Bacteria,4NF92@976|Bacteroidetes,47MSH@768503|Cytophagia	976|Bacteroidetes	P	TIGRFAM TonB-dependent siderophore receptor	-	-	-	ko:K02014	-	-	-	-	ko00000,ko02000	1.B.14	-	-	CarbopepD_reg_2,Plug,TonB_dep_Rec
BYD3_k127_3515891_1	1123057.P872_16800	1.179e-13	71.0	COG0009@1|root,COG0009@2|Bacteria,4NF5U@976|Bacteroidetes,47KX9@768503|Cytophagia	976|Bacteroidetes	J	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine	sua5	-	2.7.7.87	ko:K07566	-	-	R10463	RC00745	ko00000,ko01000,ko03009,ko03016	-	-	-	SUA5,Sua5_yciO_yrdC
BYD3_k127_3515891_0	471854.Dfer_4857	5.679e-142	479.0	COG0577@1|root,COG0577@2|Bacteria,4NDUK@976|Bacteroidetes,47JJN@768503|Cytophagia	976|Bacteroidetes	V	FtsX-like permease family	-	-	-	ko:K02004	-	M00258	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	FtsX,MacB_PCD
BYD3_k127_3523031_3	485917.Phep_1783	8.944e-30	120.0	COG3832@1|root,COG3832@2|Bacteria,4NT4P@976|Bacteroidetes,1IZPU@117747|Sphingobacteriia	976|Bacteroidetes	S	PFAM Activator of Hsp90 ATPase homolog 1-like protein	-	-	-	-	-	-	-	-	-	-	-	-	AHSA1
BYD3_k127_3523031_1	247490.KSU1_C1143	3.127e-67	233.0	COG1943@1|root,COG1943@2|Bacteria,2J0GJ@203682|Planctomycetes	203682|Planctomycetes	L	Transposase IS200 like	-	-	-	-	-	-	-	-	-	-	-	-	Y1_Tnp
BYD3_k127_3523031_0	761193.Runsl_1508	8.962e-254	792.0	COG0531@1|root,COG0531@2|Bacteria,4NDU2@976|Bacteroidetes,47JF7@768503|Cytophagia	976|Bacteroidetes	E	PFAM amino acid permease-associated region	-	-	-	ko:K03294	-	-	-	-	ko00000	2.A.3.2	-	-	AA_permease_2,AA_permease_C
BYD3_k127_3523031_2	869213.JCM21142_93445	1.818e-35	140.0	COG0349@1|root,COG0349@2|Bacteria,4NP3B@976|Bacteroidetes,47QFS@768503|Cytophagia	976|Bacteroidetes	J	3'-5' exonuclease	rnd	-	-	-	-	-	-	-	-	-	-	-	DNA_pol_A_exo1
BYD3_k127_3557827_4	1121904.ARBP01000008_gene3401	5.39e-44	164.0	COG0577@1|root,COG0577@2|Bacteria,4NDUK@976|Bacteroidetes,47JJN@768503|Cytophagia	976|Bacteroidetes	V	FtsX-like permease family	-	-	-	-	-	-	-	-	-	-	-	-	FtsX,MacB_PCD
BYD3_k127_3557827_3	509635.N824_20015	2.876e-109	380.0	COG4886@1|root,COG4886@2|Bacteria,4NG07@976|Bacteroidetes,1IPTR@117747|Sphingobacteriia	976|Bacteroidetes	S	Planctomycete cytochrome C	-	-	-	-	-	-	-	-	-	-	-	-	CHB_HEX_C_1,Fn3_assoc,PSCyt1
BYD3_k127_3557827_1	1123248.KB893337_gene2533	7.269e-234	731.0	COG4102@1|root,COG4102@2|Bacteria,4NE73@976|Bacteroidetes,1IQYR@117747|Sphingobacteriia	976|Bacteroidetes	S	Protein of unknown function (DUF1501)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1501
BYD3_k127_3557827_0	1286632.P278_22600	5e-289	906.0	COG2010@1|root,COG2010@2|Bacteria,4NEPV@976|Bacteroidetes,1HWYF@117743|Flavobacteriia	976|Bacteroidetes	C	Protein of unknown function (DUF1549)	-	-	-	-	-	-	-	-	-	-	-	-	Laminin_G_3,PSCyt1,PSCyt2,PSD1
BYD3_k127_3557827_2	761193.Runsl_4208	3.116e-139	461.0	2CD2X@1|root,2Z7RW@2|Bacteria,4NI6Q@976|Bacteroidetes,47M77@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_359960_6	1123278.KB893481_gene3487	2.02e-58	213.0	COG0642@1|root,COG0745@1|root,COG0745@2|Bacteria,COG2205@2|Bacteria,4NDXU@976|Bacteroidetes,47TVA@768503|Cytophagia	976|Bacteroidetes	T	helix_turn_helix, arabinose operon control protein	-	-	-	-	-	-	-	-	-	-	-	-	HATPase_c,HTH_18,HisKA,Reg_prop,Response_reg,TPR_12,TPR_7,TPR_8,Y_Y_Y
BYD3_k127_359960_1	1237149.C900_04921	9.487e-119	389.0	COG0741@1|root,COG0741@2|Bacteria,4NH4W@976|Bacteroidetes,47MKU@768503|Cytophagia	976|Bacteroidetes	M	Transglycosylase SLT domain	mltD_2	-	-	-	-	-	-	-	-	-	-	-	SLT
BYD3_k127_359960_4	1166018.FAES_1173	5.25e-91	310.0	COG2603@1|root,COG2603@2|Bacteria,4NH7W@976|Bacteroidetes,47KFW@768503|Cytophagia	976|Bacteroidetes	S	Rhodanese Homology Domain	-	-	-	ko:K06917	-	-	-	-	ko00000,ko01000,ko03016	-	-	-	Rhodanese
BYD3_k127_359960_0	1237149.C900_01015	2.926e-300	945.0	COG1470@1|root,COG1470@2|Bacteria,4NFPN@976|Bacteroidetes,47M4H@768503|Cytophagia	976|Bacteroidetes	S	CarboxypepD_reg-like domain	-	-	-	-	-	-	-	-	-	-	-	-	CarbopepD_reg_2
BYD3_k127_359960_5	761193.Runsl_0723	1.425e-81	276.0	COG1057@1|root,COG1057@2|Bacteria,4NFQI@976|Bacteroidetes,47JKF@768503|Cytophagia	976|Bacteroidetes	H	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)	nadD	-	2.7.7.18	ko:K00969	ko00760,ko01100,map00760,map01100	M00115	R00137,R03005	RC00002	ko00000,ko00001,ko00002,ko01000	-	-	-	CTP_transf_like
BYD3_k127_359960_3	1239962.C943_03143	1.544e-94	312.0	COG0194@1|root,COG0194@2|Bacteria,4NEDG@976|Bacteroidetes,47M4J@768503|Cytophagia	976|Bacteroidetes	F	Essential for recycling GMP and indirectly, cGMP	gmk	GO:0003674,GO:0003824,GO:0004385,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009126,GO:0009132,GO:0009135,GO:0009150,GO:0009161,GO:0009165,GO:0009167,GO:0009179,GO:0009185,GO:0009259,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0042278,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046037,GO:0046128,GO:0046483,GO:0046710,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0072521,GO:0090407,GO:1901068,GO:1901135,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901576,GO:1901657	2.7.4.8	ko:K00942	ko00230,ko01100,map00230,map01100	M00050	R00332,R02090	RC00002	ko00000,ko00001,ko00002,ko01000	-	-	-	Guanylate_kin
BYD3_k127_359960_7	1123057.P872_06665	4.8e-15	78.0	2EK82@1|root,33DYE@2|Bacteria,4NYF0@976|Bacteroidetes,47SMK@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	zf-HC2
BYD3_k127_359960_2	1237149.C900_01010	1.141e-96	319.0	COG1595@1|root,COG1595@2|Bacteria,4NEFR@976|Bacteroidetes,47JFG@768503|Cytophagia	976|Bacteroidetes	K	Belongs to the sigma-70 factor family. ECF subfamily	-	-	-	ko:K03088	-	-	-	-	ko00000,ko03021	-	-	-	Sigma70_r2,Sigma70_r4_2
BYD3_k127_359960_8	1121481.AUAS01000018_gene408	2.114e-06	51.0	COG2520@1|root,COG2520@2|Bacteria,4NNG5@976|Bacteroidetes,47PX7@768503|Cytophagia	976|Bacteroidetes	J	Methyltransferase FkbM domain	-	-	-	-	-	-	-	-	-	-	-	-	Methyltransf_21
BYD3_k127_3602514_11	1123248.KB893325_gene1166	1.924e-67	230.0	KOG1573@1|root,2Z822@2|Bacteria,4NFQF@976|Bacteroidetes,1IPN5@117747|Sphingobacteriia	976|Bacteroidetes	S	Inositol oxygenase	-	-	1.13.99.1	ko:K00469	ko00053,ko00562,map00053,map00562	-	R01184	RC00465	ko00000,ko00001,ko01000	-	-	-	MIOX
BYD3_k127_3602514_1	509635.N824_28585	4.632e-255	796.0	COG4146@1|root,COG4146@2|Bacteria,4NE9S@976|Bacteroidetes,1IPDT@117747|Sphingobacteriia	976|Bacteroidetes	S	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family	-	-	-	ko:K03307	-	-	-	-	ko00000	2.A.21	-	-	SSF
BYD3_k127_3602514_7	1121481.AUAS01000004_gene1582	2.665e-140	453.0	COG0385@1|root,COG0385@2|Bacteria,4NEIM@976|Bacteroidetes,47JSH@768503|Cytophagia	976|Bacteroidetes	S	PFAM Bile acid sodium symporter	-	-	-	ko:K03453	-	-	-	-	ko00000	2.A.28	-	-	SBF
BYD3_k127_3602514_6	471854.Dfer_2455	3.902e-149	476.0	COG0684@1|root,COG0684@2|Bacteria,4NF3M@976|Bacteroidetes,47JU7@768503|Cytophagia	976|Bacteroidetes	H	Aldolase/RraA	-	-	-	-	-	-	-	-	-	-	-	-	RraA-like
BYD3_k127_3602514_4	616991.JPOO01000003_gene2354	2.952e-174	555.0	COG3964@1|root,COG3964@2|Bacteria,4NI4W@976|Bacteroidetes,1I06U@117743|Flavobacteriia	976|Bacteroidetes	S	Amidohydrolase family	-	-	3.5.2.3	ko:K01465	ko00240,ko01100,map00240,map01100	M00051	R01993	RC00632	ko00000,ko00001,ko00002,ko01000	-	-	-	Amidohydro_1,Amidohydro_3
BYD3_k127_3602514_10	471854.Dfer_2445	7.553e-76	256.0	COG0251@1|root,COG0251@2|Bacteria,4NNXK@976|Bacteroidetes,47Q05@768503|Cytophagia	976|Bacteroidetes	J	Endoribonuclease L-PSP	-	-	-	-	-	-	-	-	-	-	-	-	Ribonuc_L-PSP
BYD3_k127_3602514_0	616991.JPOO01000003_gene2355	2.053e-265	827.0	COG2010@1|root,COG2133@1|root,COG2010@2|Bacteria,COG2133@2|Bacteria,4NDV1@976|Bacteroidetes,1HYQE@117743|Flavobacteriia,23GHM@178469|Arenibacter	976|Bacteroidetes	G	Glucose / Sorbosone dehydrogenase	-	-	-	-	-	-	-	-	-	-	-	-	Cytochrome_CBB3,GSDH
BYD3_k127_3602514_3	504472.Slin_3968	4.736e-202	635.0	COG1921@1|root,COG1921@2|Bacteria,4PN21@976|Bacteroidetes,47Y5Q@768503|Cytophagia	976|Bacteroidetes	E	Cys/Met metabolism PLP-dependent enzyme	-	-	2.9.1.1	ko:K01042	ko00450,ko00970,map00450,map00970	-	R08219	RC01246	ko00000,ko00001,ko01000	-	-	-	Aminotran_5,Cys_Met_Meta_PP
BYD3_k127_3602514_13	485918.Cpin_2251	4.96e-07	55.0	COG3525@1|root,COG3525@2|Bacteria,4NEQN@976|Bacteroidetes,1IT5W@117747|Sphingobacteriia	976|Bacteroidetes	G	Domain of unknown function (DUF4838)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4838,F5_F8_type_C,Glyco_hydro_20b,Glyco_hydro_67N
BYD3_k127_3602514_2	880526.KE386488_gene786	8.3e-207	662.0	COG3525@1|root,COG3525@2|Bacteria,4NEQN@976|Bacteroidetes,2FMUE@200643|Bacteroidia,22V00@171550|Rikenellaceae	976|Bacteroidetes	G	Domain of unknown function (DUF4838)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4838,F5_F8_type_C,Glyco_hydro_67N
BYD3_k127_3602514_8	1123248.KB893353_gene4708	8.658e-136	445.0	COG0726@1|root,COG0726@2|Bacteria	2|Bacteria	G	polysaccharide deacetylase	-	-	-	-	-	-	-	-	-	-	-	-	Lipase_GDSL_2,Polysacc_deac_1
BYD3_k127_3602514_5	504472.Slin_2036	1.939e-152	492.0	COG4299@1|root,COG4299@2|Bacteria,4NIQV@976|Bacteroidetes,47K6H@768503|Cytophagia	976|Bacteroidetes	S	Domain of unknown function (DUF5009)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1624,DUF5009
BYD3_k127_3602514_9	1121481.AUAS01000006_gene832	2.276e-83	288.0	COG3325@1|root,COG3325@2|Bacteria,4NNUM@976|Bacteroidetes,47PUW@768503|Cytophagia	976|Bacteroidetes	G	Glycoside hydrolase family	-	-	3.2.1.14	ko:K01183	ko00520,ko01100,map00520,map01100	-	R01206,R02334	RC00467	ko00000,ko00001,ko01000	-	GH18	-	Glyco_hydro_18
BYD3_k127_3602514_12	1237149.C900_00331	1.765e-35	137.0	COG1488@1|root,COG1488@2|Bacteria,4NFQK@976|Bacteroidetes,47MZ6@768503|Cytophagia	976|Bacteroidetes	H	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP	pncB	-	6.3.4.21	ko:K00763	ko00760,ko01100,map00760,map01100	-	R01724	RC00033	ko00000,ko00001,ko01000	-	-	-	NAPRTase
BYD3_k127_3613133_0	1123277.KB893181_gene2246	1.183e-197	628.0	COG1680@1|root,COG1680@2|Bacteria,4NFUI@976|Bacteroidetes	976|Bacteroidetes	V	Beta-lactamase class C and other penicillin binding	-	-	-	-	-	-	-	-	-	-	-	-	Beta-lactamase,DUF3471
BYD3_k127_3613133_5	313606.M23134_01907	6.027e-40	160.0	COG0793@1|root,COG0793@2|Bacteria,4NM82@976|Bacteroidetes,47PRW@768503|Cytophagia	976|Bacteroidetes	M	N-terminal domain of Peptidase_S41 in eukaryotic IRBP	-	-	-	-	-	-	-	-	-	-	-	-	Peptidase_S41,Peptidase_S41_N,TPR_2
BYD3_k127_3613133_4	1123277.KB893195_gene5633	2.16e-69	246.0	COG2267@1|root,COG2267@2|Bacteria,4NTHK@976|Bacteroidetes,47R8C@768503|Cytophagia	976|Bacteroidetes	I	Serine aminopeptidase, S33	-	-	-	-	-	-	-	-	-	-	-	-	Abhydrolase_1
BYD3_k127_3613133_2	1185876.BN8_00258	6.442e-82	287.0	28I8D@1|root,2Z8B7@2|Bacteria,4NM23@976|Bacteroidetes,47NIB@768503|Cytophagia	976|Bacteroidetes	S	Domain of unknown function (DUF4249)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4249
BYD3_k127_3613133_3	1454007.JAUG01000032_gene3997	1.288e-79	272.0	COG3448@1|root,COG3448@2|Bacteria,4NMHI@976|Bacteroidetes,1IS71@117747|Sphingobacteriia	976|Bacteroidetes	T	HPP family	-	-	-	-	-	-	-	-	-	-	-	-	HPP
BYD3_k127_3613133_1	1392498.JQLH01000001_gene2593	7.679e-165	532.0	COG1228@1|root,COG1228@2|Bacteria,4NEV0@976|Bacteroidetes,1HZW4@117743|Flavobacteriia,2PHHE@252356|Maribacter	976|Bacteroidetes	Q	Amidohydrolase family	-	-	-	-	-	-	-	-	-	-	-	-	Amidohydro_1
BYD3_k127_3620534_5	1124780.ANNU01000051_gene2076	9.331e-88	303.0	28IVH@1|root,2Z8TX@2|Bacteria,4NEEW@976|Bacteroidetes,47N52@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	DUF4350
BYD3_k127_3620534_4	929556.Solca_4229	2.527e-141	455.0	COG0714@1|root,COG0714@2|Bacteria,4NDVZ@976|Bacteroidetes,1IPUZ@117747|Sphingobacteriia	976|Bacteroidetes	S	ATPase family associated with various cellular activities (AAA)	-	-	-	ko:K03924	-	-	-	-	ko00000,ko01000	-	-	-	AAA_3
BYD3_k127_3620534_3	313606.M23134_03031	1.166e-170	546.0	COG1721@1|root,COG1721@2|Bacteria,4NE10@976|Bacteroidetes,47JBI@768503|Cytophagia	976|Bacteroidetes	S	Protein of unknown function DUF58	-	-	-	-	-	-	-	-	-	-	-	-	DUF58
BYD3_k127_3620534_2	1121904.ARBP01000016_gene5200	3.036e-206	677.0	COG1404@1|root,COG3291@1|root,COG1404@2|Bacteria,COG3291@2|Bacteria,4NF1M@976|Bacteroidetes	976|Bacteroidetes	O	Belongs to the peptidase S8 family	-	-	3.4.21.66	ko:K08651	-	-	-	-	ko00000,ko01000,ko01002,ko03110	-	-	-	Peptidase_S8
BYD3_k127_3620534_6	1122176.KB903535_gene2048	9.361e-13	75.0	COG1520@1|root,COG2706@1|root,COG3291@1|root,COG3391@1|root,COG1520@2|Bacteria,COG2706@2|Bacteria,COG3291@2|Bacteria,COG3391@2|Bacteria,4PMMT@976|Bacteroidetes	976|Bacteroidetes	G	Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella	-	-	-	-	-	-	-	-	-	-	-	-	VCBS
BYD3_k127_3620534_1	926549.KI421517_gene2838	1.867e-248	779.0	COG2303@1|root,COG2303@2|Bacteria,4NEF2@976|Bacteroidetes,47JQ2@768503|Cytophagia	976|Bacteroidetes	E	PFAM glucose-methanol-choline oxidoreductase	-	-	-	-	-	-	-	-	-	-	-	-	FAD_binding_2,GMC_oxred_C,GMC_oxred_N
BYD3_k127_3620534_0	1279009.ADICEAN_01020	0.0	1184.0	COG0458@1|root,COG0458@2|Bacteria,4NEQ0@976|Bacteroidetes,47ME8@768503|Cytophagia	976|Bacteroidetes	EF	PFAM Carbamoyl-phosphate synthase L chain, ATP binding	carB	-	6.3.5.5	ko:K01955	ko00240,ko00250,ko01100,map00240,map00250,map01100	M00051	R00256,R00575,R01395,R10948,R10949	RC00002,RC00010,RC00043,RC02750,RC02798,RC03314	ko00000,ko00001,ko00002,ko01000	-	-	-	CPSase_L_D2,CPSase_L_D3,MGS
BYD3_k127_3628656_0	929556.Solca_1013	0.0	1044.0	COG0841@1|root,COG0841@2|Bacteria,4NDZG@976|Bacteroidetes,1INYC@117747|Sphingobacteriia	976|Bacteroidetes	V	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family	-	-	-	ko:K18138	ko01501,ko01503,map01501,map01503	M00647,M00699,M00718	-	-	ko00000,ko00001,ko00002,ko01504,ko02000	2.A.6.2	-	-	ACR_tran
BYD3_k127_3628656_1	929556.Solca_1012	7.13e-104	348.0	COG0845@1|root,COG0845@2|Bacteria,4NF3H@976|Bacteroidetes,1ISID@117747|Sphingobacteriia	976|Bacteroidetes	M	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family	-	-	-	ko:K03585	ko01501,ko01503,map01501,map01503	M00646,M00647,M00699,M00718	-	-	ko00000,ko00001,ko00002,ko01504,ko02000,ko03036	2.A.6.2,8.A.1.6	-	-	HlyD_D23
BYD3_k127_3628656_2	929556.Solca_1011	1.413e-31	125.0	COG0640@1|root,COG0640@2|Bacteria,4NUW3@976|Bacteroidetes,1IZCR@117747|Sphingobacteriia	976|Bacteroidetes	K	helix_turn_helix, Arsenical Resistance Operon Repressor	-	-	-	ko:K03892	-	-	-	-	ko00000,ko03000	-	-	-	HTH_20
BYD3_k127_3628656_3	172045.KS04_14415	1.1e-16	82.0	COG0596@1|root,COG0596@2|Bacteria,4NPF5@976|Bacteroidetes,1I1PV@117743|Flavobacteriia,34RZA@308865|Elizabethkingia	976|Bacteroidetes	S	Serine aminopeptidase, S33	-	-	-	-	-	-	-	-	-	-	-	-	Abhydrolase_1,Hydrolase_4
BYD3_k127_3637413_1	1237149.C900_05630	1.503e-49	178.0	COG1695@1|root,COG1695@2|Bacteria,4NSI4@976|Bacteroidetes,47Q8F@768503|Cytophagia	976|Bacteroidetes	K	Transcriptional regulator	-	-	-	ko:K10947	-	-	-	-	ko00000,ko03000	-	-	-	PadR
BYD3_k127_3637413_0	1237149.C900_05629	4.107e-216	696.0	COG1983@1|root,COG1983@2|Bacteria,4NG3T@976|Bacteroidetes,47M43@768503|Cytophagia	976|Bacteroidetes	KT	PFAM PspC domain	-	-	-	ko:K03973	-	-	-	-	ko00000,ko02048,ko03000	-	-	-	DUF2807,PspC
BYD3_k127_3637413_2	1313301.AUGC01000001_gene1526	1.213e-22	102.0	2E80N@1|root,332EV@2|Bacteria,4NW5E@976|Bacteroidetes	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_3645645_0	700598.Niako_0031	3.916e-153	511.0	COG1340@1|root,COG1352@1|root,COG2201@1|root,COG4251@1|root,COG1340@2|Bacteria,COG1352@2|Bacteria,COG2201@2|Bacteria,COG4251@2|Bacteria,4NE3J@976|Bacteroidetes,1J0N2@117747|Sphingobacteriia	976|Bacteroidetes	T	Methyltransferase, chemotaxis proteins	-	-	2.1.1.80,3.1.1.61	ko:K13924	ko02020,ko02030,map02020,map02030	M00506	-	-	ko00000,ko00001,ko00002,ko01000,ko02022,ko02035	-	-	-	CheB_methylest,CheR,CheR_N,HATPase_c,HisKA,PAS,PAS_3,PAS_4,PAS_9
BYD3_k127_3645645_2	925409.KI911562_gene2877	3.918e-14	86.0	COG3291@1|root,COG3291@2|Bacteria,4NH4F@976|Bacteroidetes	976|Bacteroidetes	M	domain protein	-	-	-	-	-	-	-	-	-	-	-	-	CHU_C,IgGFc_binding
BYD3_k127_3645645_1	493475.GARC_2123	8.707e-52	207.0	COG2911@1|root,COG4935@1|root,COG2911@2|Bacteria,COG4935@2|Bacteria,1NJV7@1224|Proteobacteria,1RN7Q@1236|Gammaproteobacteria,465ZC@72275|Alteromonadaceae	1236|Gammaproteobacteria	O	Metallo-peptidase family M12B Reprolysin-like	-	-	-	-	-	-	-	-	-	-	-	-	Reprolysin_4
BYD3_k127_3646496_3	1237149.C900_04021	4.276e-118	386.0	28HA8@1|root,2Z7MQ@2|Bacteria,4NEJD@976|Bacteroidetes,47N7V@768503|Cytophagia	976|Bacteroidetes	S	Domain of unknown function (DUF4835)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4835
BYD3_k127_3646496_1	1237149.C900_04022	8.072e-165	527.0	COG0452@1|root,COG0452@2|Bacteria,4NE46@976|Bacteroidetes,47MHR@768503|Cytophagia	976|Bacteroidetes	H	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine	coaBC	-	4.1.1.36,6.3.2.5	ko:K13038	ko00770,ko01100,map00770,map01100	M00120	R03269,R04231	RC00064,RC00090,RC00822	ko00000,ko00001,ko00002,ko01000	-	-	-	DFP,Flavoprotein
BYD3_k127_3646496_8	1237149.C900_04023	8.339e-39	149.0	2CT4B@1|root,32SSJ@2|Bacteria,4NQ76@976|Bacteroidetes,47RC2@768503|Cytophagia	976|Bacteroidetes	K	Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits	rpoZ	-	-	-	-	-	-	-	-	-	-	-	RNA_pol_Rpb6
BYD3_k127_3646496_5	1237149.C900_04024	1.85e-88	300.0	COG4105@1|root,COG4105@2|Bacteria,4NJ5A@976|Bacteroidetes,47MWE@768503|Cytophagia	976|Bacteroidetes	S	TIGRFAM Outer membrane assembly lipoprotein YfiO	yfiO	-	-	ko:K05807	-	-	-	-	ko00000,ko02000	1.B.33.1	-	-	YfiO
BYD3_k127_3646496_6	1237149.C900_04025	5.407e-63	224.0	2AEI8@1|root,331SH@2|Bacteria,4NWWM@976|Bacteroidetes,47S6K@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_3646496_2	1237149.C900_04026	2.088e-160	521.0	COG1452@1|root,COG1452@2|Bacteria,4NDU3@976|Bacteroidetes,47KAE@768503|Cytophagia	976|Bacteroidetes	M	OstA-like protein	-	-	-	-	-	-	-	-	-	-	-	-	OstA,OstA_2
BYD3_k127_3646496_4	1237149.C900_04027	3.893e-109	368.0	COG0037@1|root,COG0037@2|Bacteria,4NEJS@976|Bacteroidetes,47M2U@768503|Cytophagia	976|Bacteroidetes	D	Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine	tilS	-	6.3.4.19	ko:K04075	-	-	R09597	RC02633,RC02634	ko00000,ko01000,ko03016	-	-	-	ATP_bind_3,TilS_C
BYD3_k127_3646496_0	1124780.ANNU01000037_gene135	1.452e-173	547.0	COG0039@1|root,COG0039@2|Bacteria,4NEJ7@976|Bacteroidetes,47MD1@768503|Cytophagia	976|Bacteroidetes	C	Catalyzes the reversible oxidation of malate to oxaloacetate	mdh	-	1.1.1.37	ko:K00024	ko00020,ko00270,ko00620,ko00630,ko00680,ko00710,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00270,map00620,map00630,map00680,map00710,map00720,map01100,map01110,map01120,map01130,map01200	M00009,M00011,M00012,M00168,M00173,M00346,M00374,M00620,M00740	R00342,R07136	RC00031	ko00000,ko00001,ko00002,ko01000	-	-	-	Ldh_1_C,Ldh_1_N
BYD3_k127_3646496_7	643867.Ftrac_3122	5.999e-63	219.0	COG0500@1|root,COG2226@2|Bacteria,4NE6P@976|Bacteroidetes,47K6K@768503|Cytophagia	976|Bacteroidetes	Q	Methyltransferase domain	rebM	-	-	-	-	-	-	-	-	-	-	-	Methyltransf_11
BYD3_k127_3655539_2	153721.MYP_3113	4.498e-78	266.0	COG4775@1|root,COG4775@2|Bacteria,4NRT9@976|Bacteroidetes,47VR2@768503|Cytophagia	976|Bacteroidetes	M	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_3655539_0	153721.MYP_3114	9.218e-148	475.0	COG2267@1|root,COG2267@2|Bacteria,4NIGT@976|Bacteroidetes	976|Bacteroidetes	I	Alpha/beta hydrolase family	-	-	3.4.11.5	ko:K01259	ko00330,map00330	-	R00135	-	ko00000,ko00001,ko01000,ko01002	-	-	-	Hydrolase_4
BYD3_k127_3655539_1	755732.Fluta_2259	2.304e-111	370.0	COG2207@1|root,COG2207@2|Bacteria,4NIJV@976|Bacteroidetes,1HZK0@117743|Flavobacteriia,2PC39@246874|Cryomorphaceae	976|Bacteroidetes	K	PFAM Bacterial regulatory helix-turn-helix proteins, AraC family	-	-	-	-	-	-	-	-	-	-	-	-	HTH_18
BYD3_k127_3672292_4	1237149.C900_02789	9.648e-42	157.0	COG5495@1|root,COG5495@2|Bacteria,4NI4M@976|Bacteroidetes,47MAX@768503|Cytophagia	976|Bacteroidetes	S	NADP oxidoreductase coenzyme F420-dependent	-	-	-	-	-	-	-	-	-	-	-	-	DUF2520,F420_oxidored,Rossmann-like
BYD3_k127_3672292_1	1230343.CANP01000042_gene3124	1.503e-120	398.0	COG1680@1|root,COG1680@2|Bacteria,1MVPR@1224|Proteobacteria,1RYK4@1236|Gammaproteobacteria	1236|Gammaproteobacteria	V	Beta-lactamase	-	-	-	-	-	-	-	-	-	-	-	-	Beta-lactamase
BYD3_k127_3672292_0	1048983.EL17_13420	2.77e-157	502.0	COG0113@1|root,COG0113@2|Bacteria,4NFW6@976|Bacteroidetes,47K34@768503|Cytophagia	976|Bacteroidetes	H	Belongs to the ALAD family	hemB	-	4.2.1.24	ko:K01698	ko00860,ko01100,ko01110,ko01120,map00860,map01100,map01110,map01120	M00121	R00036	RC00918,RC01781	ko00000,ko00001,ko00002,ko01000,ko04147	-	-	-	ALAD
BYD3_k127_3672292_3	485917.Phep_1596	2.183e-61	235.0	COG0642@1|root,COG2205@2|Bacteria,4NQ7H@976|Bacteroidetes,1IYDM@117747|Sphingobacteriia	976|Bacteroidetes	T	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase	-	-	-	-	-	-	-	-	-	-	-	-	7TMR-DISMED2,7TMR-DISM_7TM,HATPase_c,HisKA
BYD3_k127_3672292_2	1239962.C943_03551	4.275e-92	315.0	COG2207@1|root,COG2207@2|Bacteria,4NHEJ@976|Bacteroidetes,47MRE@768503|Cytophagia	976|Bacteroidetes	K	helix_turn_helix, arabinose operon control protein	-	-	-	-	-	-	-	-	-	-	-	-	HTH_18
BYD3_k127_3680507_2	1270196.JCKI01000003_gene1835	2.21e-89	301.0	COG1968@1|root,COG1968@2|Bacteria,4NGIZ@976|Bacteroidetes,1IPDJ@117747|Sphingobacteriia	976|Bacteroidetes	V	Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin	uppP	-	3.6.1.27	ko:K06153	ko00550,map00550	-	R05627	RC00002	ko00000,ko00001,ko01000,ko01011	-	-	-	BacA
BYD3_k127_3680507_5	643867.Ftrac_0778	7.173e-25	104.0	2DQ4W@1|root,334SC@2|Bacteria,4NUQX@976|Bacteroidetes,47RZV@768503|Cytophagia	976|Bacteroidetes	S	Protein of unknown function (DUF3098)	-	-	-	-	-	-	-	-	-	-	-	-	DUF3098
BYD3_k127_3680507_1	1237149.C900_01193	4.077e-90	305.0	COG2177@1|root,COG2177@2|Bacteria,4NH05@976|Bacteroidetes,47KM1@768503|Cytophagia	976|Bacteroidetes	D	Belongs to the ABC-4 integral membrane protein family. FtsX subfamily	ftsX	GO:0005575,GO:0005618,GO:0005623,GO:0006928,GO:0008150,GO:0009274,GO:0009276,GO:0009605,GO:0009607,GO:0009615,GO:0009987,GO:0030312,GO:0030313,GO:0031975,GO:0040011,GO:0043207,GO:0044464,GO:0048870,GO:0050896,GO:0051179,GO:0051301,GO:0051674,GO:0051704,GO:0051707,GO:0071944,GO:0071976	-	ko:K09811	ko02010,map02010	M00256	-	-	ko00000,ko00001,ko00002,ko02000,ko03036	3.A.1.140	-	-	FtsX
BYD3_k127_3680507_0	1237149.C900_01196	6.066e-91	301.0	COG1595@1|root,COG1595@2|Bacteria,4NX8R@976|Bacteroidetes,47PIG@768503|Cytophagia	976|Bacteroidetes	K	Sigma-70 region 2	-	-	-	-	-	-	-	-	-	-	-	-	Sigma70_ECF,Sigma70_r2
BYD3_k127_3680507_3	1237149.C900_01197	1.173e-47	174.0	COG4731@1|root,COG4731@2|Bacteria,4NQCK@976|Bacteroidetes	976|Bacteroidetes	S	protein conserved in bacteria	-	-	-	-	-	-	-	-	-	-	-	-	DUF2147
BYD3_k127_368274_1	760192.Halhy_0173	4.547e-54	197.0	COG0160@1|root,COG0739@1|root,COG2334@1|root,COG0160@2|Bacteria,COG0739@2|Bacteria,COG2334@2|Bacteria,4NFMP@976|Bacteroidetes,1IWK9@117747|Sphingobacteriia	976|Bacteroidetes	E	Phosphotransferase enzyme family	-	-	-	-	-	-	-	-	-	-	-	-	APH,Aminotran_3,Peptidase_M23
BYD3_k127_368274_0	1123248.KB893370_gene5134	2.564e-232	730.0	COG1231@1|root,COG1231@2|Bacteria,4NH02@976|Bacteroidetes	976|Bacteroidetes	E	Flavin containing amine oxidoreductase	-	-	1.4.3.4	ko:K00274	ko00260,ko00330,ko00340,ko00350,ko00360,ko00380,ko00950,ko00982,ko01100,ko01110,ko04726,ko04728,ko05030,ko05031,ko05034,map00260,map00330,map00340,map00350,map00360,map00380,map00950,map00982,map01100,map01110,map04726,map04728,map05030,map05031,map05034	M00135	R02173,R02382,R02529,R02532,R02613,R02908,R02919,R04025,R04300,R04674,R04890,R04893,R04894,R04907,R04908,R08346,R08347,R08348,R11354	RC00062,RC00160,RC00225,RC00676,RC00807,RC00808,RC01808,RC02226,RC02713	ko00000,ko00001,ko00002,ko01000	-	-	-	Amino_oxidase
BYD3_k127_368274_2	616991.JPOO01000003_gene582	5.117e-53	194.0	COG4654@1|root,COG4654@2|Bacteria,4NRRQ@976|Bacteroidetes,1I7PA@117743|Flavobacteriia	976|Bacteroidetes	C	Cytochrome c, class I	-	-	-	ko:K08738	ko00920,ko01100,ko01120,ko01524,ko02020,ko04115,ko04210,ko04214,ko04215,ko04932,ko05010,ko05012,ko05014,ko05016,ko05134,ko05145,ko05152,ko05161,ko05164,ko05167,ko05168,ko05200,ko05210,ko05222,ko05416,map00920,map01100,map01120,map01524,map02020,map04115,map04210,map04214,map04215,map04932,map05010,map05012,map05014,map05016,map05134,map05145,map05152,map05161,map05164,map05167,map05168,map05200,map05210,map05222,map05416	M00595	R10151	RC03151,RC03152	ko00000,ko00001,ko00002	3.D.4.6	-	-	-
BYD3_k127_3683912_3	1237149.C900_05671	9.656e-50	184.0	2CYF8@1|root,32T43@2|Bacteria,4NUAU@976|Bacteroidetes,47RBY@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_3683912_0	1189612.A33Q_0972	5.872e-135	432.0	COG0496@1|root,COG0496@2|Bacteria,4NEJ5@976|Bacteroidetes,47JN8@768503|Cytophagia	976|Bacteroidetes	S	Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates	surE	-	3.1.3.5	ko:K03787	ko00230,ko00240,ko00760,ko01100,ko01110,map00230,map00240,map00760,map01100,map01110	-	R00183,R00511,R00963,R01126,R01227,R01569,R01664,R01968,R02088,R02102,R02323,R02719,R03346	RC00017	ko00000,ko00001,ko01000	-	-	-	SurE
BYD3_k127_3683912_1	1492738.FEM21_01740	7.446e-95	317.0	COG3828@1|root,COG3828@2|Bacteria,4NDVK@976|Bacteroidetes,1HZM2@117743|Flavobacteriia,2NVKF@237|Flavobacterium	976|Bacteroidetes	S	Trehalose utilisation	-	-	-	ko:K09992	-	-	-	-	ko00000	-	-	-	DUF1080,ThuA
BYD3_k127_3683912_2	761193.Runsl_3430	4.985e-70	241.0	COG0457@1|root,COG0457@2|Bacteria,4NQ40@976|Bacteroidetes,47PSE@768503|Cytophagia	976|Bacteroidetes	S	Protein of unknown function (DUF2911)	-	-	-	-	-	-	-	-	-	-	-	-	DUF2911
BYD3_k127_3683912_4	313606.M23134_05439	4.136e-22	98.0	COG1198@1|root,COG1198@2|Bacteria,4NFHB@976|Bacteroidetes,47K5C@768503|Cytophagia	976|Bacteroidetes	L	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA	priA	-	-	ko:K04066	ko03440,map03440	-	-	-	ko00000,ko00001,ko01000,ko03400	-	-	-	DEAD,Helicase_C,ResIII
BYD3_k127_371184_4	1122605.KB893647_gene262	2.686e-25	109.0	COG0764@1|root,COG0764@2|Bacteria,4NSGQ@976|Bacteroidetes,1IUPZ@117747|Sphingobacteriia	976|Bacteroidetes	I	FabA-like domain	fabZ	-	4.2.1.59	ko:K02372	ko00061,ko00780,ko01100,ko01212,map00061,map00780,map01100,map01212	M00083,M00572	R04428,R04535,R04537,R04544,R04568,R04954,R04965,R07764,R10117,R10121	RC00831,RC01095	ko00000,ko00001,ko00002,ko01000,ko01004	-	-	-	FabA
BYD3_k127_371184_1	1197477.IA57_04700	1.874e-95	319.0	COG1216@1|root,COG3216@1|root,COG1216@2|Bacteria,COG3216@2|Bacteria,4NETR@976|Bacteroidetes,1HY3M@117743|Flavobacteriia	976|Bacteroidetes	M	Glycosyl transferase family 2	-	-	-	-	-	-	-	-	-	-	-	-	Acyltransferase,DUF2062,Glycos_transf_2
BYD3_k127_371184_3	1434325.AZQN01000002_gene728	6.443e-30	123.0	COG1216@1|root,COG3216@1|root,COG1216@2|Bacteria,COG3216@2|Bacteria,4NETR@976|Bacteroidetes,47MJC@768503|Cytophagia	976|Bacteroidetes	M	Glycosyl transferase family 2	-	-	-	-	-	-	-	-	-	-	-	-	Acyltransferase,DUF2062,Glycos_transf_2
BYD3_k127_371184_0	485918.Cpin_1873	0.0	1125.0	COG0204@1|root,COG2227@1|root,COG4258@1|root,COG0204@2|Bacteria,COG2227@2|Bacteria,COG4258@2|Bacteria,4PKBM@976|Bacteroidetes,1IQPB@117747|Sphingobacteriia	976|Bacteroidetes	I	Phosphate acyltransferases	-	-	-	ko:K07003	-	-	-	-	ko00000	-	-	-	Acyltransferase,MMPL,Methyltransf_25,Methyltransf_31
BYD3_k127_3717857_3	1492738.FEM21_10770	2.914e-19	90.0	COG2827@1|root,COG2827@2|Bacteria,4NV6N@976|Bacteroidetes,1IN1G@117743|Flavobacteriia,2NX60@237|Flavobacterium	976|Bacteroidetes	L	GIY-YIG catalytic domain	-	-	-	ko:K07461	-	-	-	-	ko00000	-	-	-	GIY-YIG
BYD3_k127_3717857_0	1237149.C900_01159	7.932e-111	366.0	COG1159@1|root,COG1159@2|Bacteria,4NES2@976|Bacteroidetes,47K35@768503|Cytophagia	976|Bacteroidetes	S	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism	era	-	-	ko:K03595	-	-	-	-	ko00000,ko03009,ko03029	-	-	-	KH_2,MMR_HSR1
BYD3_k127_3717857_2	1209072.ALBT01000032_gene2097	7.204e-34	138.0	COG3193@1|root,COG3193@2|Bacteria,1RGUD@1224|Proteobacteria,1SD2H@1236|Gammaproteobacteria	1236|Gammaproteobacteria	IQ	protein, possibly involved in utilization of glycolate and propanediol	glcG	-	-	ko:K11477	-	-	-	-	ko00000	-	-	-	Haem_degrading
BYD3_k127_3717857_1	1237149.C900_00838	1.917e-84	290.0	COG0577@1|root,COG0577@2|Bacteria,4NDUK@976|Bacteroidetes,47U5S@768503|Cytophagia	976|Bacteroidetes	V	MacB-like periplasmic core domain	-	-	-	ko:K02004	-	M00258	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	FtsX,MacB_PCD
BYD3_k127_3738626_4	1123248.KB893328_gene932	2.8e-17	91.0	2CYFR@1|root,32T44@2|Bacteria,4P6IN@976|Bacteroidetes,1IZDY@117747|Sphingobacteriia	976|Bacteroidetes	S	Protein of unknown function (DUF998)	-	-	-	-	-	-	-	-	-	-	-	-	DUF998
BYD3_k127_3738626_5	761193.Runsl_3454	7.392e-07	59.0	2CH44@1|root,33JG7@2|Bacteria,4PC1R@976|Bacteroidetes,47WPG@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_3738626_1	616991.JPOO01000003_gene2289	8.946e-261	812.0	COG2909@1|root,COG2909@2|Bacteria,4NZ2F@976|Bacteroidetes	976|Bacteroidetes	K	helix_turn_helix, Lux Regulon	-	-	-	-	-	-	-	-	-	-	-	-	GerE
BYD3_k127_3738626_2	616991.JPOO01000003_gene2291	1.237e-146	469.0	COG2159@1|root,COG2159@2|Bacteria,4PJ9Q@976|Bacteroidetes,1IEPW@117743|Flavobacteriia,23IFH@178469|Arenibacter	976|Bacteroidetes	S	amidohydrolase	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_3738626_3	641524.ADICYQ_2382	3.438e-134	433.0	COG0329@1|root,COG0329@2|Bacteria,4NI1I@976|Bacteroidetes,47NMJ@768503|Cytophagia	976|Bacteroidetes	EM	Dihydrodipicolinate synthetase family	-	-	4.3.3.7	ko:K01714	ko00261,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00261,map00300,map01100,map01110,map01120,map01130,map01230	M00016,M00525,M00526,M00527	R10147	RC03062,RC03063	ko00000,ko00001,ko00002,ko01000	-	-	-	DHDPS
BYD3_k127_3738626_0	143224.JQMD01000002_gene247	5.93e-322	996.0	COG3518@1|root,COG3518@2|Bacteria,4NHGQ@976|Bacteroidetes,1I8F7@117743|Flavobacteriia	976|Bacteroidetes	S	anti-sigma factor antagonist activity	-	-	-	-	-	-	-	-	-	-	-	-	Glyco_hydro_67N
BYD3_k127_3751607_4	925409.KI911562_gene299	2.727e-204	647.0	COG3653@1|root,COG3653@2|Bacteria,4NHDD@976|Bacteroidetes,1IR8Z@117747|Sphingobacteriia	976|Bacteroidetes	Q	PFAM D-aminoacylase, C-terminal region	-	-	3.5.1.81	ko:K06015	-	-	R02192	RC00064,RC00328	ko00000,ko01000	-	-	-	Amidohydro_3
BYD3_k127_3751607_3	1124780.ANNU01000019_gene1723	7.455e-208	663.0	COG0507@1|root,COG1112@1|root,COG0507@2|Bacteria,COG1112@2|Bacteria,4NEK7@976|Bacteroidetes,47MJ9@768503|Cytophagia	976|Bacteroidetes	L	PFAM Type III restriction enzyme, res subunit	-	-	-	-	-	-	-	-	-	-	-	-	AAA_11,AAA_12
BYD3_k127_3751607_6	700598.Niako_1535	1.494e-70	244.0	28K10@1|root,2Z9QW@2|Bacteria,4NF8J@976|Bacteroidetes,1ISKT@117747|Sphingobacteriia	976|Bacteroidetes	S	Domain of unknown function (DUF4918)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4918
BYD3_k127_3751607_0	153721.MYP_2567	4.809e-312	975.0	COG1643@1|root,COG1643@2|Bacteria,4NFJ7@976|Bacteroidetes,47KRZ@768503|Cytophagia	976|Bacteroidetes	L	DEAD DEAH box helicase	-	-	3.6.4.13	ko:K03579	-	-	-	-	ko00000,ko01000	-	-	-	DEAD,HA2,Helicase_C,HrpB_C
BYD3_k127_3751607_8	1121904.ARBP01000001_gene5347	1.047e-49	186.0	2DBZX@1|root,2ZC4A@2|Bacteria,4NMEW@976|Bacteroidetes,47UX0@768503|Cytophagia	976|Bacteroidetes	S	Putative auto-transporter adhesin, head GIN domain	-	-	-	-	-	-	-	-	-	-	-	-	DUF2807
BYD3_k127_3751607_1	1239962.C943_00386	4.711e-230	737.0	COG0577@1|root,COG0577@2|Bacteria,4NDUK@976|Bacteroidetes,47JJN@768503|Cytophagia	976|Bacteroidetes	V	FtsX-like permease family	-	-	-	-	-	-	-	-	-	-	-	-	FtsX,MacB_PCD
BYD3_k127_3751607_7	1123248.KB893385_gene4760	3.875e-50	183.0	2CEUY@1|root,32T7I@2|Bacteria,4PQ0Q@976|Bacteroidetes,1J14D@117747|Sphingobacteriia	976|Bacteroidetes	S	DinB superfamily	-	-	-	-	-	-	-	-	-	-	-	-	DinB_2
BYD3_k127_3751607_5	929703.KE386491_gene2466	6.777e-131	424.0	COG0685@1|root,COG0685@2|Bacteria,4NJPU@976|Bacteroidetes,47PWJ@768503|Cytophagia	976|Bacteroidetes	E	Methylenetetrahydrofolate reductase	-	-	-	-	-	-	-	-	-	-	-	-	MTHFR
BYD3_k127_3751607_9	760192.Halhy_0811	3.883e-45	166.0	2ED24@1|root,336Z2@2|Bacteria,4P3G3@976|Bacteroidetes	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_3751607_2	760192.Halhy_5408	2.406e-220	700.0	COG2936@1|root,COG2936@2|Bacteria,4NFFB@976|Bacteroidetes,1IPID@117747|Sphingobacteriia	976|Bacteroidetes	S	PFAM X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain	cocE	-	-	ko:K06978	-	-	-	-	ko00000	-	-	-	PepX_C,Peptidase_S15
BYD3_k127_3759979_0	761193.Runsl_2443	0.0	1203.0	COG2133@1|root,COG3291@1|root,COG4654@1|root,COG2133@2|Bacteria,COG3291@2|Bacteria,COG4654@2|Bacteria,4NKBN@976|Bacteroidetes,47JFX@768503|Cytophagia	976|Bacteroidetes	C	Glucose / Sorbosone dehydrogenase	-	-	-	ko:K08738	ko00920,ko01100,ko01120,ko01524,ko02020,ko04115,ko04210,ko04214,ko04215,ko04932,ko05010,ko05012,ko05014,ko05016,ko05134,ko05145,ko05152,ko05161,ko05164,ko05167,ko05168,ko05200,ko05210,ko05222,ko05416,map00920,map01100,map01120,map01524,map02020,map04115,map04210,map04214,map04215,map04932,map05010,map05012,map05014,map05016,map05134,map05145,map05152,map05161,map05164,map05167,map05168,map05200,map05210,map05222,map05416	M00595	R10151	RC03151,RC03152	ko00000,ko00001,ko00002	3.D.4.6	-	-	CBM_6,Cytochrom_C,GSDH,PKD
BYD3_k127_3759979_7	36331.EPrPI00000022292	9.926e-06	53.0	2DZF9@1|root,2S6ZJ@2759|Eukaryota,1MHPE@121069|Pythiales	121069|Pythiales	S	function. Source PGD	-	-	-	-	-	-	-	-	-	-	-	-	YCII
BYD3_k127_3759979_1	1237149.C900_03082	1.124e-147	474.0	COG1064@1|root,COG1064@2|Bacteria,4NJ7A@976|Bacteroidetes,47XCS@768503|Cytophagia	976|Bacteroidetes	S	Zinc-binding dehydrogenase	-	-	1.1.1.1	ko:K13953	ko00010,ko00071,ko00350,ko00625,ko00626,ko00830,ko00980,ko00982,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00625,map00626,map00830,map00980,map00982,map01100,map01110,map01120,map01130,map01220	-	R00623,R00754,R02124,R04880,R05233,R05234,R06917,R06927,R07105,R08281,R08306,R08310	RC00050,RC00087,RC00088,RC00099,RC00116,RC00649,RC01734,RC02273	ko00000,ko00001,ko01000	-	-	-	ADH_N,ADH_zinc_N_2
BYD3_k127_3759979_2	980584.AFPB01000147_gene1279	1.113e-141	464.0	COG0464@1|root,COG0464@2|Bacteria,4NFWG@976|Bacteroidetes,1HZA4@117743|Flavobacteriia	976|Bacteroidetes	O	COG0464 ATPases of the AAA class	-	-	-	-	-	-	-	-	-	-	-	-	AAA
BYD3_k127_3759979_4	1237149.C900_01832	1.578e-106	362.0	COG1361@1|root,COG1361@2|Bacteria,4NT9E@976|Bacteroidetes,47QTN@768503|Cytophagia	976|Bacteroidetes	M	Domain of unknown function (DUF4157)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4157
BYD3_k127_3759979_5	485918.Cpin_5239	1.605e-80	277.0	COG1192@1|root,COG1192@2|Bacteria,4NGFE@976|Bacteroidetes,1IW93@117747|Sphingobacteriia	976|Bacteroidetes	D	4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family	-	-	-	ko:K03496	-	-	-	-	ko00000,ko03036,ko04812	-	-	-	AAA_31
BYD3_k127_3759979_6	1266925.JHVX01000010_gene1413	1.071e-17	88.0	2EH77@1|root,33AZ1@2|Bacteria,1NMNZ@1224|Proteobacteria,2WB5H@28216|Betaproteobacteria,372CP@32003|Nitrosomonadales	28216|Betaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_3759979_3	980584.AFPB01000147_gene1277	1.086e-134	443.0	COG2931@1|root,COG2931@2|Bacteria,4PKJU@976|Bacteroidetes,1IJB7@117743|Flavobacteriia	976|Bacteroidetes	Q	PAP2 superfamily	-	-	-	-	-	-	-	-	-	-	-	-	PAP2
BYD3_k127_3762886_3	1120965.AUBV01000003_gene501	9.11e-121	413.0	COG4251@1|root,COG4251@2|Bacteria,4NGXA@976|Bacteroidetes,47NUK@768503|Cytophagia	976|Bacteroidetes	T	signal transduction histidine kinase	-	-	-	-	-	-	-	-	-	-	-	-	CHASE3,HATPase_c,HisKA,PAS_3,PAS_4,PAS_8,PAS_9
BYD3_k127_3762886_4	1237149.C900_05341	6.327e-53	190.0	COG0784@1|root,COG0784@2|Bacteria,4PNDD@976|Bacteroidetes,47YFG@768503|Cytophagia	976|Bacteroidetes	T	cheY-homologous receiver domain	-	-	-	-	-	-	-	-	-	-	-	-	Response_reg
BYD3_k127_3762886_2	1120968.AUBX01000011_gene3193	4.857e-173	555.0	COG5000@1|root,COG5000@2|Bacteria,4NFFM@976|Bacteroidetes,47MZF@768503|Cytophagia	976|Bacteroidetes	T	His Kinase A (phosphoacceptor) domain	-	-	-	-	-	-	-	-	-	-	-	-	HATPase_c,HisKA,PAS,PAS_9,Response_reg
BYD3_k127_3762886_1	1237149.C900_05248	1.448e-222	715.0	COG4775@1|root,COG4775@2|Bacteria,4NE80@976|Bacteroidetes,47KRB@768503|Cytophagia	976|Bacteroidetes	M	Outer membrane protein protective antigen OMA87	-	-	-	-	-	-	-	-	-	-	-	-	Bac_surface_Ag
BYD3_k127_3762886_0	1237149.C900_05247	6.977e-304	990.0	COG2911@1|root,COG2911@2|Bacteria,4NF7F@976|Bacteroidetes,47JE0@768503|Cytophagia	976|Bacteroidetes	M	PFAM Family of	-	-	-	-	-	-	-	-	-	-	-	-	TamB
BYD3_k127_3762886_6	1237149.C900_05849	5.932e-16	79.0	COG5487@1|root,COG5487@2|Bacteria,4NXPG@976|Bacteroidetes,47T5C@768503|Cytophagia	976|Bacteroidetes	S	Protein of unknown function (DUF1328)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1328
BYD3_k127_3762886_7	1237149.C900_01332	4.211e-11	70.0	COG5502@1|root,COG5502@2|Bacteria	2|Bacteria	V	conserved protein (DUF2267)	-	-	2.1.1.72	ko:K03427,ko:K06910,ko:K07005	-	-	-	-	ko00000,ko01000,ko02048	-	-	-	DUF2267
BYD3_k127_3762886_8	1185876.BN8_04744	4.196e-06	52.0	COG4980@1|root,COG4980@2|Bacteria,4NVGN@976|Bacteroidetes,47SCJ@768503|Cytophagia	976|Bacteroidetes	S	YtxH-like protein	-	-	-	-	-	-	-	-	-	-	-	-	YtxH
BYD3_k127_3762886_5	497964.CfE428DRAFT_3996	6.551e-21	93.0	COG3237@1|root,COG3237@2|Bacteria	2|Bacteria	K	CsbD-like	yjbJ	GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464	-	-	-	-	-	-	-	-	-	-	CsbD
BYD3_k127_3763434_4	925409.KI911562_gene942	1.953e-44	163.0	COG3420@1|root,COG3420@2|Bacteria,4NEGT@976|Bacteroidetes,1IRBN@117747|Sphingobacteriia	976|Bacteroidetes	P	PFAM Periplasmic copper-binding protein (NosD)	nosD	-	-	ko:K07218	-	-	-	-	ko00000	-	-	-	NosD
BYD3_k127_3763434_1	1048983.EL17_22575	3.127e-97	323.0	COG1131@1|root,COG1131@2|Bacteria,4NG9T@976|Bacteroidetes,47PAA@768503|Cytophagia	976|Bacteroidetes	V	ABC transporter	-	-	-	ko:K19340	ko02010,map02010	M00762	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.132.2	-	-	ABC_tran
BYD3_k127_3763434_0	1048983.EL17_22570	1.632e-101	336.0	COG1277@1|root,COG1277@2|Bacteria,4NGGR@976|Bacteroidetes,47KSX@768503|Cytophagia	976|Bacteroidetes	S	ABC-2 family transporter protein	-	-	-	ko:K19341	ko02010,map02010	M00762	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.132.2	-	-	ABC2_membrane_2,ABC2_membrane_5
BYD3_k127_3763434_3	1267211.KI669560_gene1630	1.526e-49	182.0	COG2335@1|root,COG2335@2|Bacteria,4NMPI@976|Bacteroidetes,1IYQI@117747|Sphingobacteriia	976|Bacteroidetes	M	Four repeated domains in the Fasciclin I family of proteins, present in many other contexts.	-	-	-	-	-	-	-	-	-	-	-	-	Fasciclin
BYD3_k127_3763434_5	153721.MYP_2173	5.831e-37	143.0	COG2346@1|root,COG2346@2|Bacteria,4NQCV@976|Bacteroidetes,47R5V@768503|Cytophagia	976|Bacteroidetes	S	Bacterial-like globin	-	-	-	ko:K06886	-	-	-	-	ko00000	-	-	-	Bac_globin
BYD3_k127_3763434_2	925409.KI911562_gene2464	3.206e-85	289.0	COG3256@1|root,COG3256@2|Bacteria,4NG9H@976|Bacteroidetes,1INS6@117747|Sphingobacteriia	976|Bacteroidetes	P	Nitric oxide reductase	-	-	1.7.2.5	ko:K04561	ko00910,ko01120,map00910,map01120	M00529	R00294	RC02794	ko00000,ko00001,ko00002,ko01000	3.D.4.10	-	-	COX1
BYD3_k127_3769199_2	1121875.KB907549_gene1931	5.264e-49	183.0	COG3264@1|root,COG3264@2|Bacteria,4NEAM@976|Bacteroidetes,1HYUA@117743|Flavobacteriia	976|Bacteroidetes	M	mechanosensitive ion channel	-	-	-	ko:K05802	-	-	-	-	ko00000,ko02000	1.A.23.1.1	-	-	MS_channel
BYD3_k127_3769199_1	643867.Ftrac_0904	3.792e-54	219.0	COG2911@1|root,COG2911@2|Bacteria,4NKIP@976|Bacteroidetes,47YDC@768503|Cytophagia	976|Bacteroidetes	G	Protein conserved in bacteria	-	-	-	-	-	-	-	-	-	-	-	-	DUF4394,Gal_Lectin
BYD3_k127_3769199_0	1237149.C900_03603	2.372e-223	708.0	COG1086@1|root,COG1086@2|Bacteria,4NERY@976|Bacteroidetes,47KE5@768503|Cytophagia	976|Bacteroidetes	GM	Polysaccharide biosynthesis protein	-	-	-	-	-	-	-	-	-	-	-	-	CoA_binding_3,Polysacc_synt_2
BYD3_k127_377594_2	1237149.C900_03180	4.108e-94	316.0	COG3741@1|root,COG3741@2|Bacteria,4NIN9@976|Bacteroidetes,47UJG@768503|Cytophagia	976|Bacteroidetes	E	N-formylglutamate amidohydrolase	-	-	-	-	-	-	-	-	-	-	-	-	FGase
BYD3_k127_377594_1	391596.PBAL39_20054	5.024e-172	551.0	COG0402@1|root,COG0402@2|Bacteria,4NG64@976|Bacteroidetes	976|Bacteroidetes	F	Amidohydrolase family	-	-	-	-	-	-	-	-	-	-	-	-	Amidohydro_1
BYD3_k127_377594_0	1356852.N008_10960	1.414e-203	640.0	COG0823@1|root,COG1506@1|root,COG0823@2|Bacteria,COG1506@2|Bacteria,4NF70@976|Bacteroidetes,47JEZ@768503|Cytophagia	976|Bacteroidetes	EU	Peptidase S9, prolyl oligopeptidase active site domain protein	-	-	-	-	-	-	-	-	-	-	-	-	DPPIV_N,PD40,Peptidase_S9
BYD3_k127_383575_5	471854.Dfer_1237	5.387e-22	97.0	COG0673@1|root,COG0673@2|Bacteria,4NDYI@976|Bacteroidetes,47NPG@768503|Cytophagia	976|Bacteroidetes	S	Oxidoreductase family, NAD-binding Rossmann fold	-	-	-	-	-	-	-	-	-	-	-	-	GFO_IDH_MocA
BYD3_k127_383575_6	1237149.C900_01005	9.225e-12	78.0	COG0810@1|root,COG0810@2|Bacteria,4NSYT@976|Bacteroidetes,47W0H@768503|Cytophagia	976|Bacteroidetes	M	Gram-negative bacterial TonB protein C-terminal	-	-	-	-	-	-	-	-	-	-	-	-	CarbopepD_reg_2,TonB_C
BYD3_k127_383575_4	171693.BN988_00343	4.966e-28	131.0	COG0705@1|root,COG0705@2|Bacteria,1TQXT@1239|Firmicutes,4HCDF@91061|Bacilli,23IZG@182709|Oceanobacillus	91061|Bacilli	S	Rhomboid family	gluP	-	3.4.21.105	ko:K19225	-	-	-	-	ko00000,ko01000,ko01002	-	-	-	Rhomboid,TPR_2,TPR_8
BYD3_k127_383575_0	1237149.C900_04399	2.959e-169	540.0	COG0501@1|root,COG0501@2|Bacteria,4NESF@976|Bacteroidetes,47KTS@768503|Cytophagia	976|Bacteroidetes	O	Zn-dependent protease with chaperone function	-	-	3.4.24.84	ko:K03799,ko:K06013	ko00900,ko01130,map00900,map01130	M00743	R09845	RC00141	ko00000,ko00001,ko00002,ko01000,ko01002,ko04147	-	-	-	Peptidase_M48,Peptidase_M48_N
BYD3_k127_383575_1	485918.Cpin_4084	3.022e-76	263.0	COG3279@1|root,COG3279@2|Bacteria,4NF8U@976|Bacteroidetes	976|Bacteroidetes	KT	Response regulator of the LytR AlgR family	-	-	-	-	-	-	-	-	-	-	-	-	LytTR,Response_reg
BYD3_k127_383575_3	509635.N824_22865	2.454e-62	228.0	COG2972@1|root,COG2972@2|Bacteria,4NH1Q@976|Bacteroidetes,1ISFF@117747|Sphingobacteriia	976|Bacteroidetes	T	Histidine kinase	-	-	-	-	-	-	-	-	-	-	-	-	His_kinase
BYD3_k127_383575_2	1237149.C900_04989	8.164e-76	260.0	COG3485@1|root,COG3485@2|Bacteria,4NEZ1@976|Bacteroidetes,47QHP@768503|Cytophagia	976|Bacteroidetes	Q	Dioxygenase	-	-	1.13.11.3	ko:K00449	ko00362,ko00624,ko01100,ko01120,ko01220,map00362,map00624,map01100,map01120,map01220	-	R01631,R03549	RC00388,RC00953	br01602,ko00000,ko00001,ko01000	-	-	-	Dioxygenase_C
BYD3_k127_3837073_1	1237149.C900_02661	3.397e-89	299.0	COG1368@1|root,COG1368@2|Bacteria,4NFI9@976|Bacteroidetes,47K4G@768503|Cytophagia	976|Bacteroidetes	M	COGs COG1368 Phosphoglycerol transferase and related protein alkaline phosphatase superfamily	ltaS2	-	-	-	-	-	-	-	-	-	-	-	Sulfatase
BYD3_k127_3837073_5	497964.CfE428DRAFT_5334	2.463e-24	108.0	COG3216@1|root,COG3216@2|Bacteria	2|Bacteria	M	Uncharacterized protein conserved in bacteria (DUF2062)	-	-	-	ko:K09928	-	-	-	-	ko00000	-	-	-	DUF2062
BYD3_k127_3837073_0	1237149.C900_02654	1.179e-247	775.0	COG1574@1|root,COG1574@2|Bacteria,4NFMV@976|Bacteroidetes,47TV8@768503|Cytophagia	976|Bacteroidetes	S	Amidohydrolase family	-	-	-	-	-	-	-	-	-	-	-	-	Amidohydro_3
BYD3_k127_3837073_4	1237149.C900_02657	2.979e-46	171.0	COG4103@1|root,COG4103@2|Bacteria,4NUAN@976|Bacteroidetes,47R5X@768503|Cytophagia	976|Bacteroidetes	S	Tellurite resistance protein TerB	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_3837073_3	1237149.C900_02658	7.29e-57	205.0	COG3595@1|root,COG3595@2|Bacteria,4NSAQ@976|Bacteroidetes,47RJQ@768503|Cytophagia	976|Bacteroidetes	S	Putative auto-transporter adhesin, head GIN domain	-	-	-	-	-	-	-	-	-	-	-	-	DUF2807
BYD3_k127_3837073_2	313606.M23134_00102	1.587e-74	258.0	COG3000@1|root,COG3000@2|Bacteria,4NMKR@976|Bacteroidetes,47P2V@768503|Cytophagia	976|Bacteroidetes	I	Fatty acid hydroxylase superfamily	-	-	-	-	-	-	-	-	-	-	-	-	FA_hydroxylase
BYD3_k127_3840173_4	1123248.KB893315_gene3246	1.72e-44	166.0	COG4319@1|root,COG4319@2|Bacteria,4NX69@976|Bacteroidetes	976|Bacteroidetes	S	ketosteroid isomerase	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_3840173_3	1550091.JROE01000002_gene1135	3.297e-109	360.0	COG1533@1|root,COG1533@2|Bacteria,4NE62@976|Bacteroidetes	976|Bacteroidetes	L	Radical SAM	-	-	-	-	-	-	-	-	-	-	-	-	Radical_SAM
BYD3_k127_3840173_0	1237149.C900_00839	3.077e-244	779.0	COG0577@1|root,COG0577@2|Bacteria,4NDUK@976|Bacteroidetes,47JJN@768503|Cytophagia	976|Bacteroidetes	V	FtsX-like permease family	-	-	-	-	-	-	-	-	-	-	-	-	FtsX,MacB_PCD
BYD3_k127_3840173_1	926549.KI421517_gene575	7.166e-212	670.0	COG0154@1|root,COG0154@2|Bacteria,4NF8C@976|Bacteroidetes,47MMB@768503|Cytophagia	976|Bacteroidetes	J	Amidase	gatA	-	3.5.1.4	ko:K01426	ko00330,ko00360,ko00380,ko00627,ko00643,ko01120,map00330,map00360,map00380,map00627,map00643,map01120	-	R02540,R03096,R03180,R03909,R05551,R05590	RC00010,RC00100,RC00950,RC01025	ko00000,ko00001,ko01000	-	-	-	Amidase
BYD3_k127_3840173_2	929562.Emtol_1230	6.353e-137	440.0	COG0627@1|root,COG0627@2|Bacteria,4NGI8@976|Bacteroidetes,47M5Z@768503|Cytophagia	976|Bacteroidetes	S	Putative esterase	-	-	-	-	-	-	-	-	-	-	-	-	Esterase
BYD3_k127_384632_0	1237149.C900_00745	1.966e-279	878.0	COG2982@1|root,COG2982@2|Bacteria,4NEJQ@976|Bacteroidetes,47KBD@768503|Cytophagia	976|Bacteroidetes	M	AsmA-like C-terminal region	-	-	-	-	-	-	-	-	-	-	-	-	AsmA,AsmA_2
BYD3_k127_384632_2	1237149.C900_00747	1.606e-164	530.0	COG1012@1|root,COG1012@2|Bacteria,4NGHD@976|Bacteroidetes,47KZA@768503|Cytophagia	976|Bacteroidetes	C	Belongs to the aldehyde dehydrogenase family	alkH	-	1.2.1.3,1.2.1.68	ko:K00128,ko:K00154	ko00010,ko00053,ko00071,ko00280,ko00310,ko00330,ko00340,ko00380,ko00410,ko00561,ko00620,ko00625,ko00903,ko00981,ko01100,ko01110,ko01120,ko01130,map00010,map00053,map00071,map00280,map00310,map00330,map00340,map00380,map00410,map00561,map00620,map00625,map00903,map00981,map01100,map01110,map01120,map01130	M00135	R00264,R00631,R00710,R00904,R01752,R01986,R02549,R02678,R02940,R02957,R03283,R03869,R04065,R04506,R04903,R05050,R05237,R05238,R05286,R06366,R08146	RC00047,RC00071,RC00080,RC00186,RC00218,RC00242,RC00816,RC01500	ko00000,ko00001,ko00002,ko01000	-	-	-	Aldedh
BYD3_k127_384632_5	1237149.C900_04917	5.434e-41	162.0	2ETG7@1|root,338QK@2|Bacteria,4NW0M@976|Bacteroidetes,47X76@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_384632_3	1237149.C900_00748	7.361e-54	197.0	COG2885@1|root,COG2885@2|Bacteria,4NEND@976|Bacteroidetes,47KG7@768503|Cytophagia	976|Bacteroidetes	M	Belongs to the ompA family	-	-	-	-	-	-	-	-	-	-	-	-	CarboxypepD_reg,OmpA,PD40,RicinB_lectin_2
BYD3_k127_384632_4	1237149.C900_00749	5.74e-44	165.0	COG2885@1|root,COG2885@2|Bacteria,4NEND@976|Bacteroidetes,47KG7@768503|Cytophagia	976|Bacteroidetes	M	Belongs to the ompA family	-	-	-	-	-	-	-	-	-	-	-	-	OmpA,PD40
BYD3_k127_384632_1	1237149.C900_00749	6.921e-235	735.0	COG2885@1|root,COG2885@2|Bacteria,4NEND@976|Bacteroidetes,47KG7@768503|Cytophagia	976|Bacteroidetes	M	Belongs to the ompA family	-	-	-	-	-	-	-	-	-	-	-	-	OmpA,PD40
BYD3_k127_3848720_2	760192.Halhy_1439	1.463e-144	467.0	COG0671@1|root,COG0671@2|Bacteria,4NF9W@976|Bacteroidetes,1IV2I@117747|Sphingobacteriia	976|Bacteroidetes	I	PAP2 superfamily	-	-	-	-	-	-	-	-	-	-	-	-	PAP2
BYD3_k127_3848720_7	1237149.C900_00553	1.522e-55	203.0	COG3637@1|root,COG3637@2|Bacteria,4NN3F@976|Bacteroidetes,47XR1@768503|Cytophagia	976|Bacteroidetes	M	Outer membrane protein beta-barrel domain	-	-	-	-	-	-	-	-	-	-	-	-	OMP_b-brl,OMP_b-brl_2
BYD3_k127_3848720_9	504472.Slin_2140	1.46e-50	184.0	COG1670@1|root,COG1670@2|Bacteria,4NTU9@976|Bacteroidetes,47UWA@768503|Cytophagia	976|Bacteroidetes	J	Acetyltransferase (GNAT) domain	-	-	-	-	-	-	-	-	-	-	-	-	Acetyltransf_1,Acetyltransf_3
BYD3_k127_3848720_12	944479.JQLX01000002_gene1663	7.985e-32	127.0	COG2329@1|root,COG2329@2|Bacteria,1RHK9@1224|Proteobacteria,43A9C@68525|delta/epsilon subdivisions,2X578@28221|Deltaproteobacteria,2M7F5@213113|Desulfurellales	28221|Deltaproteobacteria	S	Antibiotic biosynthesis monooxygenase	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_3848720_10	1123276.KB893245_gene1426	3.9e-41	159.0	COG2353@1|root,COG2353@2|Bacteria,4NT3W@976|Bacteroidetes,47R2B@768503|Cytophagia	976|Bacteroidetes	S	Belongs to the UPF0312 family	-	-	-	-	-	-	-	-	-	-	-	-	YceI
BYD3_k127_3848720_15	391603.FBALC1_16832	5.314e-06	57.0	2BXJ3@1|root,32JAR@2|Bacteria,4NQKG@976|Bacteroidetes,1I4MR@117743|Flavobacteriia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	Lipocalin_5
BYD3_k127_3848720_13	643867.Ftrac_1599	4.66e-11	65.0	2BV0E@1|root,32QD0@2|Bacteria,4PBZ5@976|Bacteroidetes,47WJJ@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_3848720_6	991.IW20_12725	7.566e-63	219.0	COG3832@1|root,COG3832@2|Bacteria,4NT4P@976|Bacteroidetes,1IMWY@117743|Flavobacteriia,2NVXJ@237|Flavobacterium	976|Bacteroidetes	S	Activator of Hsp90 ATPase homolog 1-like protein	-	-	-	-	-	-	-	-	-	-	-	-	AHSA1
BYD3_k127_3848720_0	616991.JPOO01000003_gene1741	1.725e-194	618.0	COG3119@1|root,COG3119@2|Bacteria,4NEM3@976|Bacteroidetes,1HZWB@117743|Flavobacteriia,23G8X@178469|Arenibacter	976|Bacteroidetes	P	Sulfatase	-	-	-	-	-	-	-	-	-	-	-	-	DUF4976,Sulfatase
BYD3_k127_3848720_11	1189620.AJXL01000106_gene3273	1.269e-37	148.0	COG3631@1|root,COG3631@2|Bacteria,4P470@976|Bacteroidetes	976|Bacteroidetes	S	Ketosteroid isomerase-related protein	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_3848720_3	1237149.C900_01351	7.675e-103	345.0	COG0726@1|root,COG0726@2|Bacteria,4NXPA@976|Bacteroidetes,47XNH@768503|Cytophagia	976|Bacteroidetes	G	Polysaccharide deacetylase	-	-	3.5.1.41	ko:K01452	ko00520,ko01100,map00520,map01100	-	R02333	RC00166,RC00300	ko00000,ko00001,ko01000	-	-	-	Polysacc_deac_1
BYD3_k127_3848720_8	886379.AEWI01000022_gene100	2.654e-53	198.0	COG2992@1|root,COG2992@2|Bacteria,4PJ3P@976|Bacteroidetes,2G24A@200643|Bacteroidia,3XKJA@558415|Marinilabiliaceae	976|Bacteroidetes	S	Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase	-	-	-	-	-	-	-	-	-	-	-	-	Glucosaminidase
BYD3_k127_3848720_14	391603.FBALC1_09043	8.476e-08	62.0	COG2834@1|root,COG2834@2|Bacteria,4NHV3@976|Bacteroidetes,1I15K@117743|Flavobacteriia	976|Bacteroidetes	M	Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4292,LolA_like
BYD3_k127_3848720_1	313595.P700755_002975	1.277e-166	534.0	COG2957@1|root,COG2957@2|Bacteria,4NGF8@976|Bacteroidetes,1HYT2@117743|Flavobacteriia	976|Bacteroidetes	E	Belongs to the agmatine deiminase family	-	-	3.5.3.12	ko:K10536	ko00330,ko01100,map00330,map01100	-	R01416	RC00177	ko00000,ko00001,ko01000	-	-	-	PAD_porph
BYD3_k127_3848720_5	700598.Niako_3433	4.594e-72	248.0	COG0454@1|root,COG0456@2|Bacteria,4PMDG@976|Bacteroidetes,1J0T1@117747|Sphingobacteriia	976|Bacteroidetes	K	acetyltransferase	-	-	-	-	-	-	-	-	-	-	-	-	Acetyltransf_1
BYD3_k127_3848720_4	421531.IX38_11930	1.041e-74	258.0	2CEN7@1|root,2Z9XA@2|Bacteria,4NFTE@976|Bacteroidetes,1I7QE@117743|Flavobacteriia,3ZQZI@59732|Chryseobacterium	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_3852197_3	1237149.C900_05633	6.317e-46	176.0	COG3292@1|root,COG4585@1|root,COG3292@2|Bacteria,COG4585@2|Bacteria,4NHSC@976|Bacteroidetes,47NEM@768503|Cytophagia	976|Bacteroidetes	T	Two component regulator three Y	-	-	-	-	-	-	-	-	-	-	-	-	HATPase_c,HisKA_3,Reg_prop,SpoIIE,Y_Y_Y
BYD3_k127_3852197_2	1189612.A33Q_3933	4.851e-81	274.0	COG2197@1|root,COG2197@2|Bacteria,4NR4G@976|Bacteroidetes,47UM2@768503|Cytophagia	976|Bacteroidetes	K	helix_turn_helix, Lux Regulon	-	-	-	-	-	-	-	-	-	-	-	-	GerE,Response_reg
BYD3_k127_3852197_0	1237149.C900_05635	0.0	1257.0	COG1629@1|root,COG1629@2|Bacteria,4PKAS@976|Bacteroidetes,47YAG@768503|Cytophagia	976|Bacteroidetes	P	TonB-dependent Receptor Plug Domain	-	-	-	-	-	-	-	-	-	-	-	-	CarbopepD_reg_2,Plug,TonB_dep_Rec
BYD3_k127_3852197_1	760192.Halhy_2145	1.718e-143	473.0	COG0521@1|root,COG0521@2|Bacteria,4NFT1@976|Bacteroidetes,1IS6R@117747|Sphingobacteriia	976|Bacteroidetes	H	Starch-binding associating with outer membrane	-	-	-	-	-	-	-	-	-	-	-	-	SusD-like_2
BYD3_k127_3852197_4	760192.Halhy_2146	6.57e-11	67.0	2DG20@1|root,2ZU4Q@2|Bacteria	2|Bacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_3860273_0	929556.Solca_0266	6.851e-91	329.0	COG0577@1|root,COG0577@2|Bacteria,4NDUK@976|Bacteroidetes,1IW4Z@117747|Sphingobacteriia	976|Bacteroidetes	V	MacB-like periplasmic core domain	-	-	-	ko:K02004	-	M00258	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	FtsX,MacB_PCD
BYD3_k127_3860273_1	314285.KT71_06007	1.513e-28	125.0	COG0577@1|root,COG0577@2|Bacteria,1NREW@1224|Proteobacteria,1RVN1@1236|Gammaproteobacteria,1J78V@118884|unclassified Gammaproteobacteria	1236|Gammaproteobacteria	V	COG0577 ABC-type antimicrobial peptide transport system, permease component	-	-	-	ko:K02004	-	M00258	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	FtsX,MacB_PCD
BYD3_k127_3878431_1	313603.FB2170_14803	1.045e-27	114.0	COG1142@1|root,COG1142@2|Bacteria	2|Bacteria	C	4 iron, 4 sulfur cluster binding	-	-	-	-	-	-	-	-	-	-	-	-	Fer4_10,Fer4_7,Fer4_9,Pyr_redox_2,Pyr_redox_3,cNMP_binding
BYD3_k127_3878431_0	313603.FB2170_14833	0.0	1307.0	COG0755@1|root,COG0755@2|Bacteria,4NDY1@976|Bacteroidetes,1HXDN@117743|Flavobacteriia,2PG6S@252356|Maribacter	976|Bacteroidetes	O	Cytochrome C assembly protein	ccmC	-	-	-	-	-	-	-	-	-	-	-	Cytochrom_C_asm,ResB
BYD3_k127_3879836_1	1454007.JAUG01000047_gene512	3.894e-170	539.0	COG0673@1|root,COG0673@2|Bacteria,4NJ92@976|Bacteroidetes,1ISF7@117747|Sphingobacteriia	976|Bacteroidetes	S	Oxidoreductase domain protein	-	-	-	-	-	-	-	-	-	-	-	-	GFO_IDH_MocA,GFO_IDH_MocA_C
BYD3_k127_3879836_2	1237149.C900_02411	1.927e-77	263.0	COG2207@1|root,COG2207@2|Bacteria,4NM5G@976|Bacteroidetes,47QJ8@768503|Cytophagia	976|Bacteroidetes	K	PFAM Bacterial regulatory helix-turn-helix proteins, AraC family	-	-	-	-	-	-	-	-	-	-	-	-	HTH_18
BYD3_k127_3879836_0	700598.Niako_7250	3.356e-203	647.0	COG0855@1|root,COG0855@2|Bacteria,4NE3P@976|Bacteroidetes,1IP1X@117747|Sphingobacteriia	976|Bacteroidetes	H	Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)	ppk	-	2.7.4.1	ko:K00937	ko00190,ko03018,map00190,map03018	-	-	-	ko00000,ko00001,ko01000,ko03019	-	-	-	PP_kinase,PP_kinase_C,PP_kinase_N
BYD3_k127_3926872_2	1121022.ABENE_05090	2.314e-57	207.0	COG4638@1|root,COG4638@2|Bacteria,1MX47@1224|Proteobacteria,2VG2H@28211|Alphaproteobacteria,2KJUZ@204458|Caulobacterales	204458|Caulobacterales	P	Rieske-like [2Fe-2S] domain	-	-	-	-	-	-	-	-	-	-	-	-	Rieske
BYD3_k127_3926872_3	1341155.FSS13T_07980	1.063e-33	131.0	2C82G@1|root,32RK9@2|Bacteria,4NSXV@976|Bacteroidetes,1I466@117743|Flavobacteriia,2NX9M@237|Flavobacterium	976|Bacteroidetes	S	Protein of unknown function (DUF4242)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4242
BYD3_k127_3926872_0	1121875.KB907550_gene639	4.568e-198	637.0	COG4191@1|root,COG4191@2|Bacteria,4NEJX@976|Bacteroidetes,1I0JH@117743|Flavobacteriia	976|Bacteroidetes	T	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase	-	-	-	-	-	-	-	-	-	-	-	-	7TMR-DISMED2,7TMR-DISM_7TM,HATPase_c,HisKA,SnoaL_3
BYD3_k127_3926872_1	1305737.JAFX01000001_gene1481	6.462e-187	591.0	COG4805@1|root,COG4805@2|Bacteria,4NFAK@976|Bacteroidetes,47MIN@768503|Cytophagia	976|Bacteroidetes	S	Bacterial protein of unknown function (DUF885)	-	-	-	-	-	-	-	-	-	-	-	-	DUF885
BYD3_k127_3926918_3	1237149.C900_00264	3.883e-27	113.0	COG0694@1|root,COG0694@2|Bacteria,4NSHJ@976|Bacteroidetes,47RA0@768503|Cytophagia	976|Bacteroidetes	O	NifU domain protein	nfuA	-	-	-	-	-	-	-	-	-	-	-	NifU
BYD3_k127_3926918_2	1237149.C900_00265	4.174e-183	577.0	COG0489@1|root,COG0489@2|Bacteria,4NF5I@976|Bacteroidetes,47JZ3@768503|Cytophagia	976|Bacteroidetes	D	Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP	mrp	-	-	ko:K03593	-	-	-	-	ko00000,ko03029,ko03036	-	-	-	FeS_assembly_P,ParA
BYD3_k127_3926918_1	643867.Ftrac_0931	3.885e-201	645.0	COG0358@1|root,COG0358@2|Bacteria,4NENT@976|Bacteroidetes,47K9B@768503|Cytophagia	976|Bacteroidetes	L	RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication	dnaG	-	-	ko:K02316	ko03030,map03030	-	-	-	ko00000,ko00001,ko01000,ko03032	-	-	-	DnaB_bind,Toprim_2,Toprim_4,Toprim_N,zf-CHC2
BYD3_k127_3926918_0	1237149.C900_05672	6.406e-225	702.0	COG0108@1|root,COG0807@1|root,COG0108@2|Bacteria,COG0807@2|Bacteria,4NF6I@976|Bacteroidetes,47KP9@768503|Cytophagia	976|Bacteroidetes	H	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate	ribBA	-	3.5.4.25,4.1.99.12	ko:K14652	ko00740,ko00790,ko01100,ko01110,map00740,map00790,map01100,map01110	M00125,M00840	R00425,R07281	RC00293,RC01792,RC01815,RC02504	ko00000,ko00001,ko00002,ko01000	-	-	-	DHBP_synthase,GTP_cyclohydro2
BYD3_k127_3928369_3	926549.KI421517_gene1819	8.085e-118	385.0	COG2084@1|root,COG2084@2|Bacteria,4NEF7@976|Bacteroidetes,47N6M@768503|Cytophagia	976|Bacteroidetes	I	NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase	mmsB	-	1.1.1.31,1.1.1.60	ko:K00020,ko:K00042	ko00280,ko00630,ko01100,map00280,map00630,map01100	-	R01745,R01747,R05066	RC00099	ko00000,ko00001,ko01000	-	-	-	NAD_binding_11,NAD_binding_2
BYD3_k127_3928369_4	1185876.BN8_03567	7.199e-81	277.0	COG3836@1|root,COG3836@2|Bacteria,4NH2V@976|Bacteroidetes,47JVN@768503|Cytophagia	976|Bacteroidetes	G	Belongs to the HpcH HpaI aldolase family	-	-	4.1.2.20,4.1.2.52,4.1.2.53	ko:K01630,ko:K02510,ko:K12660	ko00051,ko00053,ko00350,ko01120,map00051,map00053,map00350,map01120	-	R01645,R01647,R02261,R02754,R03277	RC00307,RC00435,RC00572,RC00574,RC03057	ko00000,ko00001,ko01000	-	-	-	HpcH_HpaI
BYD3_k127_3928369_1	234267.Acid_7728	5.302e-147	476.0	COG4948@1|root,COG4948@2|Bacteria	2|Bacteria	M	carboxylic acid catabolic process	-	-	-	-	-	-	-	-	-	-	-	-	MR_MLE_C,MR_MLE_N
BYD3_k127_3928369_0	1267535.KB906767_gene2310	1.304e-191	606.0	COG4948@1|root,COG4948@2|Bacteria,3Y4P2@57723|Acidobacteria,2JP41@204432|Acidobacteriia	204432|Acidobacteriia	M	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain	-	-	4.2.1.40	ko:K01706	ko00053,ko01100,map00053,map01100	-	R02752,R08056	RC00543	ko00000,ko00001,ko01000	-	-	-	MR_MLE_C,MR_MLE_N
BYD3_k127_3928369_2	1123277.KB893173_gene1831	1.224e-122	406.0	COG2610@1|root,COG2610@2|Bacteria,4NJ5B@976|Bacteroidetes,47K2S@768503|Cytophagia	976|Bacteroidetes	EG	PFAM Gluconate transporter	-	-	-	ko:K03299	-	-	-	-	ko00000,ko02000	2.A.8	-	-	GntP_permease
BYD3_k127_3950588_0	760192.Halhy_0027	2.682e-284	890.0	COG1629@1|root,COG4771@2|Bacteria,4NDX3@976|Bacteroidetes,1IPS9@117747|Sphingobacteriia	976|Bacteroidetes	P	TonB-dependent receptor plug domain	-	-	-	ko:K02014	-	-	-	-	ko00000,ko02000	1.B.14	-	-	CarbopepD_reg_2,Plug,TonB_dep_Rec
BYD3_k127_3950588_1	1123248.KB893333_gene2814	4.348e-132	432.0	COG0477@1|root,COG2814@2|Bacteria,4NEY4@976|Bacteroidetes,1IV9Q@117747|Sphingobacteriia	976|Bacteroidetes	EGP	Sugar (and other) transporter	-	-	-	-	-	-	-	-	-	-	-	-	MFS_1
BYD3_k127_3950588_3	1123248.KB893333_gene2813	1e-68	239.0	COG2128@1|root,COG2128@2|Bacteria,4NNYF@976|Bacteroidetes,1IT75@117747|Sphingobacteriia	976|Bacteroidetes	S	Carboxymuconolactone decarboxylase family	-	-	-	-	-	-	-	-	-	-	-	-	CMD
BYD3_k127_3950588_2	1123248.KB893333_gene2812	7.419e-84	282.0	COG2128@1|root,COG2128@2|Bacteria,4NNHK@976|Bacteroidetes,1IWPA@117747|Sphingobacteriia	976|Bacteroidetes	S	Carboxymuconolactone decarboxylase family	-	-	-	-	-	-	-	-	-	-	-	-	CMD
BYD3_k127_3951059_1	1237149.C900_02591	1.304e-148	482.0	COG0577@1|root,COG0577@2|Bacteria,4NKYD@976|Bacteroidetes,47MU6@768503|Cytophagia	976|Bacteroidetes	V	MacB-like periplasmic core domain	-	-	-	-	-	-	-	-	-	-	-	-	FtsX,MacB_PCD
BYD3_k127_3951059_3	1237149.C900_01308	9.05e-44	161.0	COG1695@1|root,COG1695@2|Bacteria	2|Bacteria	K	negative regulation of transcription, DNA-templated	-	-	-	-	-	-	-	-	-	-	-	-	PadR
BYD3_k127_3951059_0	760192.Halhy_4092	4.288e-171	543.0	COG2070@1|root,COG2070@2|Bacteria,4NF8Z@976|Bacteroidetes,1ISZF@117747|Sphingobacteriia	976|Bacteroidetes	C	PFAM 2-nitropropane dioxygenase NPD	-	-	1.13.12.16	ko:K00459	ko00910,map00910	-	R00025	RC02541,RC02759	ko00000,ko00001,ko01000	-	-	-	NMO
BYD3_k127_3951059_2	1443665.JACA01000013_gene4129	7.259e-96	319.0	COG0693@1|root,COG0693@2|Bacteria,4NGII@976|Bacteroidetes,1HWTK@117743|Flavobacteriia,2YGQ1@290174|Aquimarina	976|Bacteroidetes	S	ThiJ/PfpI family-like	-	-	-	-	-	-	-	-	-	-	-	-	DJ-1_PfpI
BYD3_k127_3970972_7	926554.KI912635_gene3018	1.041e-19	90.0	COG4828@1|root,COG4828@2|Bacteria	2|Bacteria	S	Protein of unknown function (DUF1622)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1622
BYD3_k127_3970972_2	1519464.HY22_02900	8.894e-142	457.0	COG0346@1|root,COG0346@2|Bacteria	2|Bacteria	E	lactoylglutathione lyase activity	-	-	-	-	-	-	-	-	-	-	-	-	Glyoxalase
BYD3_k127_3970972_8	1210046.B277_03750	3.582e-19	100.0	28HEJ@1|root,2Z7QZ@2|Bacteria,2I8GI@201174|Actinobacteria	201174|Actinobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	DUF4185,DUF5005
BYD3_k127_3970972_5	1517681.HW45_17850	4.113e-23	110.0	COG3350@1|root,COG3350@2|Bacteria,1N0GC@1224|Proteobacteria,1S846@1236|Gammaproteobacteria,1XY38@135623|Vibrionales	135623|Vibrionales	S	YHS domain	-	-	-	-	-	-	-	-	-	-	-	-	YHS
BYD3_k127_3970972_4	760192.Halhy_1898	1.263e-25	117.0	COG3350@1|root,COG3350@2|Bacteria,4PK14@976|Bacteroidetes,1IZ1G@117747|Sphingobacteriia	976|Bacteroidetes	S	monooxygenase activity	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_3970972_6	864069.MicloDRAFT_00035470	6.397e-21	98.0	COG3193@1|root,COG3193@2|Bacteria,1RGUD@1224|Proteobacteria,2VA9A@28211|Alphaproteobacteria,1JYVB@119045|Methylobacteriaceae	28211|Alphaproteobacteria	S	Haem-degrading	-	-	-	-	-	-	-	-	-	-	-	-	Haem_degrading
BYD3_k127_3970972_1	504472.Slin_2519	1.445e-208	661.0	COG3386@1|root,COG3386@2|Bacteria,4NS13@976|Bacteroidetes,47UF3@768503|Cytophagia	976|Bacteroidetes	G	SMP-30/Gluconolaconase/LRE-like region	-	-	3.1.1.17	ko:K01053	ko00030,ko00053,ko00930,ko01100,ko01110,ko01120,ko01130,ko01200,ko01220,map00030,map00053,map00930,map01100,map01110,map01120,map01130,map01200,map01220	M00129	R01519,R02933,R03751	RC00537,RC00983	ko00000,ko00001,ko00002,ko01000,ko04147	-	-	-	SGL
BYD3_k127_3970972_3	1233951.IO90_15525	6.108e-35	141.0	COG2203@1|root,COG5002@1|root,COG2203@2|Bacteria,COG5002@2|Bacteria,4PM0I@976|Bacteroidetes,1IFY6@117743|Flavobacteriia,3HGS9@358033|Chryseobacterium	976|Bacteroidetes	T	PAS fold	-	-	-	-	-	-	-	-	-	-	-	-	HATPase_c,HisKA,PAS_3,PAS_4
BYD3_k127_3970972_0	700598.Niako_4610	1.314e-295	916.0	COG0737@1|root,COG0737@2|Bacteria,4NESM@976|Bacteroidetes,1IVAT@117747|Sphingobacteriia	976|Bacteroidetes	F	COGs COG0737 5'-nucleotidase 2' 3'-cyclic phosphodiesterase and related esterase	-	-	3.1.3.5,3.6.1.45	ko:K01081,ko:K11751	ko00230,ko00240,ko00760,ko01100,ko01110,map00230,map00240,map00760,map01100,map01110	-	R00183,R00511,R00963,R01126,R01227,R01569,R01664,R01968,R02088,R02102,R02323,R02719,R03346	RC00017	ko00000,ko00001,ko01000	-	-	-	5_nucleotid_C,Metallophos
BYD3_k127_3970972_9	153721.MYP_2893	4.347e-10	63.0	COG2353@1|root,COG2353@2|Bacteria,4NSJH@976|Bacteroidetes,47QHY@768503|Cytophagia	976|Bacteroidetes	S	Belongs to the UPF0312 family	-	-	-	-	-	-	-	-	-	-	-	-	YceI
BYD3_k127_3974550_1	485918.Cpin_1928	1.435e-184	587.0	COG1070@1|root,COG1070@2|Bacteria,4NFBZ@976|Bacteroidetes,1IQMH@117747|Sphingobacteriia	976|Bacteroidetes	G	PFAM FGGY family of carbohydrate kinases, N-terminal domain	xylB_2	-	2.7.1.17	ko:K00854	ko00040,ko01100,map00040,map01100	M00014	R01639	RC00002,RC00538	ko00000,ko00001,ko00002,ko01000	-	-	-	FGGY_C,FGGY_N
BYD3_k127_3974550_0	760192.Halhy_3320	7.24e-219	686.0	COG2115@1|root,COG2115@2|Bacteria,4NEBQ@976|Bacteroidetes,1IP02@117747|Sphingobacteriia	976|Bacteroidetes	G	Belongs to the xylose isomerase family	xylA	-	5.3.1.5	ko:K01805	ko00040,ko00051,ko01100,map00040,map00051,map01100	-	R00878,R01432	RC00376,RC00516	ko00000,ko00001,ko01000	-	-	-	-
BYD3_k127_3974550_3	66874.JOFS01000001_gene934	0.0009232	49.0	COG2936@1|root,COG2936@2|Bacteria,2I1ZG@201174|Actinobacteria	201174|Actinobacteria	S	X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain	-	-	-	-	-	-	-	-	-	-	-	-	PepX_C,Peptidase_S15
BYD3_k127_3974550_2	643867.Ftrac_0048	4.028e-73	263.0	COG0457@1|root,COG0642@1|root,COG0457@2|Bacteria,COG2205@2|Bacteria,4NI29@976|Bacteroidetes,47KZN@768503|Cytophagia	976|Bacteroidetes	T	PFAM Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase	-	-	-	-	-	-	-	-	-	-	-	-	HATPase_c,HisKA,TPR_12,TPR_8
BYD3_k127_3989469_12	269798.CHU_3660	1.588e-30	128.0	COG2319@1|root,COG4249@1|root,COG2319@2|Bacteria,COG4249@2|Bacteria,4NKC3@976|Bacteroidetes,47NP5@768503|Cytophagia	976|Bacteroidetes	S	Caspase domain	-	-	-	-	-	-	-	-	-	-	-	-	Peptidase_C14,WD40
BYD3_k127_3989469_6	1237149.C900_04724	1.825e-107	355.0	COG1624@1|root,COG1624@2|Bacteria,4NG3Z@976|Bacteroidetes,47JT6@768503|Cytophagia	976|Bacteroidetes	S	Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria	dacA	-	-	-	-	-	-	-	-	-	-	-	DisA_N
BYD3_k127_3989469_8	1150600.ADIARSV_1374	6.994e-102	340.0	COG0294@1|root,COG0294@2|Bacteria,4NEYJ@976|Bacteroidetes,1IPC6@117747|Sphingobacteriia	976|Bacteroidetes	H	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives	folP	-	2.5.1.15	ko:K00796	ko00790,ko01100,map00790,map01100	M00126,M00841	R03066,R03067	RC00121,RC00842	ko00000,ko00001,ko00002,ko01000	-	-	-	Pterin_bind
BYD3_k127_3989469_9	1237149.C900_04726	6.181e-86	287.0	28HFG@1|root,2Z7RJ@2|Bacteria,4NFNY@976|Bacteroidetes,47PDT@768503|Cytophagia	976|Bacteroidetes	S	Domain of Unknown Function (DUF1599)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1599
BYD3_k127_3989469_5	1237149.C900_04727	2.112e-145	469.0	COG2259@1|root,COG2259@2|Bacteria,4NGNF@976|Bacteroidetes,47JTZ@768503|Cytophagia	976|Bacteroidetes	S	DoxX family	doxX	-	-	-	-	-	-	-	-	-	-	-	DoxX
BYD3_k127_3989469_11	1120966.AUBU01000003_gene1778	3.435e-37	145.0	COG0703@1|root,COG0703@2|Bacteria,4NQ73@976|Bacteroidetes,47QWF@768503|Cytophagia	976|Bacteroidetes	F	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate	aroK	GO:0000287,GO:0003674,GO:0003824,GO:0004765,GO:0005488,GO:0006082,GO:0006520,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009987,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019438,GO:0019632,GO:0019752,GO:0032787,GO:0043167,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046872,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901615	2.7.1.71	ko:K00891	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	M00022	R02412	RC00002,RC00078	ko00000,ko00001,ko00002,ko01000	-	-	-	SKI
BYD3_k127_3989469_7	1239962.C943_02294	3.082e-104	356.0	COG2067@1|root,COG2067@2|Bacteria,4NFS7@976|Bacteroidetes,47K28@768503|Cytophagia	976|Bacteroidetes	I	PFAM Outer membrane protein transport protein (OMPP1 FadL TodX)	-	-	-	-	-	-	-	-	-	-	-	-	Toluene_X
BYD3_k127_3989469_0	926549.KI421517_gene833	9.744e-255	792.0	COG0442@1|root,COG0442@2|Bacteria,4NEAF@976|Bacteroidetes,47JTQ@768503|Cytophagia	976|Bacteroidetes	J	Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro)	proS	GO:0003674,GO:0003824,GO:0004812,GO:0004827,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006433,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0017101,GO:0019538,GO:0019752,GO:0032991,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576	6.1.1.15	ko:K01881	ko00970,map00970	M00359,M00360	R03661	RC00055,RC00523	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	-	-	-	HGTP_anticodon,ProRS-C_1,tRNA-synt_2b
BYD3_k127_3989469_10	1237149.C900_02887	3.323e-41	156.0	COG1030@1|root,COG1030@2|Bacteria,4NW09@976|Bacteroidetes,47S4B@768503|Cytophagia	976|Bacteroidetes	O	NfeD-like C-terminal, partner-binding	-	-	-	-	-	-	-	-	-	-	-	-	NfeD
BYD3_k127_3989469_3	643867.Ftrac_3711	1.772e-162	516.0	COG4864@1|root,COG4864@2|Bacteria,4NGG6@976|Bacteroidetes,47KKM@768503|Cytophagia	976|Bacteroidetes	S	UPF0365 protein	-	-	-	-	-	-	-	-	-	-	-	-	YdfA_immunity
BYD3_k127_3989469_4	1237149.C900_02886	9.268e-161	530.0	COG0515@1|root,COG0515@2|Bacteria	1237149.C900_02886|-	KLT	protein kinase activity	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_3989469_2	1237149.C900_02885	7.486e-210	661.0	COG0491@1|root,COG2897@1|root,COG0491@2|Bacteria,COG2897@2|Bacteria,4NE2Y@976|Bacteroidetes,47KD4@768503|Cytophagia	976|Bacteroidetes	P	COGs COG0491 Zn-dependent hydrolase including glyoxylase	-	-	-	-	-	-	-	-	-	-	-	-	Lactamase_B,Rhodanese
BYD3_k127_3989469_1	1121481.AUAS01000013_gene4140	7.822e-241	758.0	COG1305@1|root,COG4196@1|root,COG1305@2|Bacteria,COG4196@2|Bacteria,4NIPS@976|Bacteroidetes,47M8S@768503|Cytophagia	976|Bacteroidetes	E	Putative amidoligase enzyme (DUF2126)	-	-	-	-	-	-	-	-	-	-	-	-	Bact_transglu_N,DUF2126,Transglut_core
BYD3_k127_4001307_11	1237149.C900_02467	1.801e-17	83.0	COG5276@1|root,COG5276@2|Bacteria,4NG4W@976|Bacteroidetes,47K9R@768503|Cytophagia	976|Bacteroidetes	S	LVIVD repeat	-	-	-	-	-	-	-	-	-	-	-	-	LVIVD
BYD3_k127_4001307_0	1237149.C900_02470	9.242e-276	860.0	COG0488@1|root,COG0488@2|Bacteria,4NG1W@976|Bacteroidetes,47KHA@768503|Cytophagia	976|Bacteroidetes	S	ABC transporter	-	-	-	ko:K06158	-	-	-	-	ko00000,ko03012	-	-	-	ABC_tran,ABC_tran_CTD,ABC_tran_Xtn
BYD3_k127_4001307_1	1237149.C900_02472	4.478e-159	511.0	COG2133@1|root,COG2133@2|Bacteria,4NDV1@976|Bacteroidetes,47MXD@768503|Cytophagia	976|Bacteroidetes	G	Glucose / Sorbosone dehydrogenase	-	-	-	-	-	-	-	-	-	-	-	-	GSDH
BYD3_k127_4001307_5	1237149.C900_05162	1.764e-86	293.0	COG0682@1|root,COG0682@2|Bacteria	2|Bacteria	M	lipoprotein biosynthetic process	lgt_2	-	-	ko:K13292	-	-	-	-	ko00000,ko01000	-	-	-	LGT
BYD3_k127_4001307_9	29581.BW37_04632	7.06e-20	96.0	COG3187@1|root,COG3187@2|Bacteria,1NGG1@1224|Proteobacteria,2VXQ2@28216|Betaproteobacteria	28216|Betaproteobacteria	O	META domain	-	-	-	-	-	-	-	-	-	-	-	-	META
BYD3_k127_4001307_4	1089547.KB913013_gene1801	1.55e-91	307.0	COG2133@1|root,COG2133@2|Bacteria,4NGMS@976|Bacteroidetes,47KFU@768503|Cytophagia	976|Bacteroidetes	G	Domain of Unknown Function (DUF1080)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1080
BYD3_k127_4001307_8	1237149.C900_02061	3.831e-31	128.0	2DGJ8@1|root,2ZW7H@2|Bacteria,4P7SP@976|Bacteroidetes	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_4001307_7	1237149.C900_02479	1.925e-60	213.0	COG0457@1|root,COG0457@2|Bacteria,4NQ40@976|Bacteroidetes,47XP3@768503|Cytophagia	976|Bacteroidetes	S	Protein of unknown function (DUF2911)	-	-	-	-	-	-	-	-	-	-	-	-	DUF2911
BYD3_k127_4001307_6	1237149.C900_02480	1.059e-85	286.0	COG2131@1|root,COG2131@2|Bacteria,4NM48@976|Bacteroidetes,47P6P@768503|Cytophagia	976|Bacteroidetes	F	PFAM Cytidine and deoxycytidylate deaminase zinc-binding region	comEB	-	3.5.4.12	ko:K01493	ko00240,ko01100,map00240,map01100	M00429	R01663	RC00074	ko00000,ko00001,ko00002,ko01000,ko02044	-	-	-	dCMP_cyt_deam_1
BYD3_k127_4001307_2	1237149.C900_02483	1.359e-120	396.0	COG0812@1|root,COG0812@2|Bacteria,4NE78@976|Bacteroidetes,47KJJ@768503|Cytophagia	976|Bacteroidetes	M	Cell wall formation	murB	-	1.3.1.98	ko:K00075	ko00520,ko00550,ko01100,map00520,map00550,map01100	-	R03191,R03192	RC02639	ko00000,ko00001,ko01000,ko01011	-	-	-	FAD_binding_4,MurB_C
BYD3_k127_4001307_3	1237149.C900_01374	1.919e-114	381.0	2C85B@1|root,2ZAAM@2|Bacteria,4NKNU@976|Bacteroidetes,47P2W@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_4001307_10	1313301.AUGC01000004_gene2417	5.008e-18	85.0	COG3047@1|root,COG3047@2|Bacteria,4NMXC@976|Bacteroidetes	976|Bacteroidetes	M	Outer membrane protein beta-barrel domain	-	-	-	-	-	-	-	-	-	-	-	-	OMP_b-brl_2
BYD3_k127_4025154_6	760192.Halhy_2377	7.806e-72	252.0	COG1228@1|root,COG1228@2|Bacteria,4NHGA@976|Bacteroidetes,1IWA0@117747|Sphingobacteriia	976|Bacteroidetes	Q	Amidohydrolase family	-	-	-	-	-	-	-	-	-	-	-	-	Amidohydro_1
BYD3_k127_4025154_0	1237149.C900_01588	4.031e-120	402.0	COG1413@1|root,COG1413@2|Bacteria	2|Bacteria	C	deoxyhypusine monooxygenase activity	-	-	3.4.11.2,3.4.24.3	ko:K01256,ko:K01387	ko00480,ko01100,map00480,map01100	-	R00899,R04951	RC00096,RC00141	ko00000,ko00001,ko01000,ko01002,ko02042	-	-	-	HEAT_2,HEAT_PBS,Peptidase_M1,Peptidase_M9,Peptidase_M9_N
BYD3_k127_4025154_3	1237149.C900_01589	7.19e-96	325.0	COG2972@1|root,COG2972@2|Bacteria,4NFDP@976|Bacteroidetes,47N4N@768503|Cytophagia	976|Bacteroidetes	T	PFAM histidine kinase internal region	-	-	-	-	-	-	-	-	-	-	-	-	His_kinase
BYD3_k127_4025154_5	1237149.C900_01590	1.058e-86	298.0	COG2972@1|root,COG2972@2|Bacteria,4NPKE@976|Bacteroidetes	976|Bacteroidetes	T	Histidine kinase	-	-	-	-	-	-	-	-	-	-	-	-	His_kinase
BYD3_k127_4025154_2	1237149.C900_01591	7.984e-98	325.0	COG3279@1|root,COG3279@2|Bacteria,4NJW4@976|Bacteroidetes	976|Bacteroidetes	T	LytTr DNA-binding domain	-	-	-	-	-	-	-	-	-	-	-	-	LytTR,Response_reg
BYD3_k127_4025154_8	1120966.AUBU01000003_gene1558	7.405e-47	171.0	COG0023@1|root,COG0023@2|Bacteria,4NS6M@976|Bacteroidetes,47R38@768503|Cytophagia	976|Bacteroidetes	J	PFAM translation initiation factor SUI1	-	-	-	ko:K03113	ko03013,map03013	-	-	-	ko00000,ko00001,ko03012	-	-	-	SUI1
BYD3_k127_4025154_10	1415780.JPOG01000001_gene558	2.254e-19	98.0	COG0484@1|root,COG0484@2|Bacteria,1MUZ4@1224|Proteobacteria,1RP09@1236|Gammaproteobacteria,1X3XU@135614|Xanthomonadales	135614|Xanthomonadales	O	Cytochrome C biogenesis protein	cbpA	-	-	ko:K05516	-	-	-	-	ko00000,ko03036,ko03110	-	-	-	DnaJ,DnaJ_C
BYD3_k127_4025154_4	1237149.C900_00284	4.213e-94	316.0	COG0589@1|root,COG0589@2|Bacteria,4NFZ5@976|Bacteroidetes,47PIA@768503|Cytophagia	976|Bacteroidetes	T	Universal stress protein	-	-	-	-	-	-	-	-	-	-	-	-	Usp
BYD3_k127_4025154_1	1121373.KB903665_gene3134	1.202e-99	335.0	COG1230@1|root,COG1230@2|Bacteria,4NIHB@976|Bacteroidetes,47NNT@768503|Cytophagia	976|Bacteroidetes	P	Cation efflux family	czcD	-	-	ko:K16264	-	-	-	-	ko00000,ko02000	2.A.4.1	-	-	Cation_efflux
BYD3_k127_4025154_12	1237149.C900_03949	0.0001013	51.0	2928S@1|root,2ZPTC@2|Bacteria,4P8WI@976|Bacteroidetes	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_4025154_11	860228.Ccan_07440	1.383e-06	55.0	2EFP1@1|root,339F4@2|Bacteria,4PQ0N@976|Bacteroidetes	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_4025154_9	926549.KI421517_gene310	9.5e-45	168.0	2CIC2@1|root,32S7R@2|Bacteria,4NTW2@976|Bacteroidetes,47Q8B@768503|Cytophagia	976|Bacteroidetes	S	Domain of unknown function (DUF4136)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4136
BYD3_k127_4025154_7	1121897.AUGO01000001_gene1185	1.218e-49	179.0	COG2076@1|root,COG2076@2|Bacteria,4NQ4U@976|Bacteroidetes,1I2X4@117743|Flavobacteriia,2NWN9@237|Flavobacterium	976|Bacteroidetes	P	Cation transporter	sugE	-	-	ko:K11741	-	-	-	-	ko00000,ko02000	2.A.7.1	-	-	Multi_Drug_Res
BYD3_k127_4033382_0	1239962.C943_00988	3.931e-212	666.0	COG2704@1|root,COG2704@2|Bacteria,4NGDF@976|Bacteroidetes,47T5H@768503|Cytophagia	976|Bacteroidetes	S	Anaerobic c4-dicarboxylate membrane transporter	-	-	-	ko:K07791,ko:K07792	ko02020,map02020	-	-	-	ko00000,ko00001,ko02000	2.A.13.1	-	-	DcuA_DcuB
BYD3_k127_4033382_1	1279009.ADICEAN_02693	2.569e-174	553.0	COG1160@1|root,COG1160@2|Bacteria,4NE2J@976|Bacteroidetes,47K6M@768503|Cytophagia	976|Bacteroidetes	S	GTPase that plays an essential role in the late steps of ribosome biogenesis	der	-	-	ko:K03977	-	-	-	-	ko00000,ko03009	-	-	-	KH_dom-like,MMR_HSR1
BYD3_k127_403961_0	1237149.C900_03280	2.414e-192	635.0	COG5000@1|root,COG5000@2|Bacteria,4NE49@976|Bacteroidetes,47JEP@768503|Cytophagia	976|Bacteroidetes	T	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase	zraS_1	-	-	-	-	-	-	-	-	-	-	-	HATPase_c,HisKA
BYD3_k127_403961_4	1121957.ATVL01000006_gene3369	1.341e-29	122.0	COG5349@1|root,COG5349@2|Bacteria,4NQ87@976|Bacteroidetes,47R4M@768503|Cytophagia	976|Bacteroidetes	S	Protein of unknown function (DUF983)	-	-	-	-	-	-	-	-	-	-	-	-	DUF983
BYD3_k127_403961_2	1237149.C900_03277	2.708e-65	227.0	COG2322@1|root,COG2322@2|Bacteria,4NM5N@976|Bacteroidetes,47QB2@768503|Cytophagia	976|Bacteroidetes	S	Protein of unknown function (DUF420)	yozB	-	-	ko:K08976	-	-	-	-	ko00000	-	-	-	DUF420
BYD3_k127_403961_6	1237149.C900_03276	3.469e-07	58.0	COG1999@1|root,COG1999@2|Bacteria,4NY1A@976|Bacteroidetes	976|Bacteroidetes	S	signal sequence binding	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_403961_3	1237149.C900_03275	5.083e-33	130.0	COG5605@1|root,COG5605@2|Bacteria,4NTVI@976|Bacteroidetes,47R14@768503|Cytophagia	976|Bacteroidetes	S	Prokaryotic Cytochrome C oxidase subunit IV	-	-	-	-	-	-	-	-	-	-	-	-	COX4_pro
BYD3_k127_403961_1	643867.Ftrac_3697	2.102e-117	381.0	COG1845@1|root,COG1845@2|Bacteria,4NDYG@976|Bacteroidetes,47JVP@768503|Cytophagia	976|Bacteroidetes	C	cytochrome c oxidase subunit III	coxP	-	1.9.3.1	ko:K02276	ko00190,ko01100,map00190,map01100	M00155	R00081	RC00016	ko00000,ko00001,ko00002,ko01000	3.D.4.4,3.D.4.6	-	-	COX3
BYD3_k127_4042942_5	929562.Emtol_1618	1.115e-48	178.0	COG1947@1|root,COG1947@2|Bacteria,4NGFC@976|Bacteroidetes,47JG4@768503|Cytophagia	976|Bacteroidetes	I	Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol	ispE	GO:0003674,GO:0003824,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0044237,GO:0050515	2.7.1.148	ko:K00919	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	M00096	R05634	RC00002,RC01439	ko00000,ko00001,ko00002,ko01000	-	-	-	GHMP_kinases_C,GHMP_kinases_N
BYD3_k127_4042942_4	1237149.C900_03679	1.764e-92	314.0	COG0697@1|root,COG0697@2|Bacteria,4NE8D@976|Bacteroidetes,47JNH@768503|Cytophagia	976|Bacteroidetes	EG	PFAM EamA-like transporter family	-	-	-	-	-	-	-	-	-	-	-	-	EamA
BYD3_k127_4042942_1	1237149.C900_03678	1.559e-140	455.0	COG0795@1|root,COG0795@2|Bacteria,4NF8Y@976|Bacteroidetes,47JHT@768503|Cytophagia	976|Bacteroidetes	S	Permease YjgP YjgQ family	lptG	-	-	ko:K11720	ko02010,map02010	M00320	-	-	ko00000,ko00001,ko00002,ko02000	1.B.42.1	-	-	YjgP_YjgQ
BYD3_k127_4042942_0	1305737.JAFX01000001_gene3257	8.084e-197	617.0	COG0343@1|root,COG0343@2|Bacteria,4NE15@976|Bacteroidetes,47JEY@768503|Cytophagia	976|Bacteroidetes	J	Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine)	tgt	-	2.4.2.29	ko:K00773	-	-	R03789,R10209	RC00063	ko00000,ko01000,ko03016	-	-	-	TGT
BYD3_k127_4042942_2	1048983.EL17_09325	8.301e-114	377.0	COG1609@1|root,COG1609@2|Bacteria,4NE81@976|Bacteroidetes,47P3S@768503|Cytophagia	976|Bacteroidetes	K	helix_turn _helix lactose operon repressor	-	-	-	ko:K02529	-	-	-	-	ko00000,ko03000	-	-	-	LacI,Peripla_BP_4
BYD3_k127_4042942_3	1237149.C900_03673	3.02e-97	330.0	COG1215@1|root,COG1215@2|Bacteria,4NESG@976|Bacteroidetes,47JZE@768503|Cytophagia	976|Bacteroidetes	M	PFAM Glycosyl transferase family 2	-	-	-	-	-	-	-	-	-	-	-	-	Glyco_tranf_2_3,Glycos_transf_2
BYD3_k127_4056614_0	761193.Runsl_0587	1.627e-256	798.0	COG0518@1|root,COG0519@1|root,COG0518@2|Bacteria,COG0519@2|Bacteria,4NESX@976|Bacteroidetes,47JG6@768503|Cytophagia	976|Bacteroidetes	F	Catalyzes the synthesis of GMP from XMP	guaA	GO:0003674,GO:0003824,GO:0003921,GO:0003922,GO:0006139,GO:0006163,GO:0006164,GO:0006177,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009163,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0016884,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034404,GO:0034641,GO:0034654,GO:0042278,GO:0042451,GO:0042455,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046037,GO:0046128,GO:0046129,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901068,GO:1901070,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659	6.3.5.2	ko:K01951	ko00230,ko00983,ko01100,map00230,map00983,map01100	M00050	R01230,R01231,R08244	RC00010,RC00204	ko00000,ko00001,ko00002,ko01000,ko01002	-	-	-	GATase,GMP_synt_C,NAD_synthase
BYD3_k127_4056614_3	1237149.C900_04417	2.962e-61	222.0	COG0683@1|root,COG0683@2|Bacteria,4PKN8@976|Bacteroidetes,47NJW@768503|Cytophagia	976|Bacteroidetes	E	PFAM Receptor family ligand binding region	-	-	-	-	-	-	-	-	-	-	-	-	Peripla_BP_6
BYD3_k127_4056614_2	1237149.C900_04417	1.915e-63	226.0	COG0683@1|root,COG0683@2|Bacteria,4PKN8@976|Bacteroidetes,47NJW@768503|Cytophagia	976|Bacteroidetes	E	PFAM Receptor family ligand binding region	-	-	-	-	-	-	-	-	-	-	-	-	Peripla_BP_6
BYD3_k127_4056614_1	1189612.A33Q_2059	5.097e-189	599.0	COG0001@1|root,COG0001@2|Bacteria,4NDXG@976|Bacteroidetes,47KB8@768503|Cytophagia	976|Bacteroidetes	H	PFAM Aminotransferase class-III	hemL	-	5.4.3.8	ko:K01845	ko00860,ko01100,ko01110,ko01120,map00860,map01100,map01110,map01120	M00121	R02272	RC00677	ko00000,ko00001,ko00002,ko01000,ko01007	-	-	-	Aminotran_3
BYD3_k127_4056614_4	643867.Ftrac_2404	4.094e-49	191.0	COG2203@1|root,COG2203@2|Bacteria,4NICW@976|Bacteroidetes,47NI3@768503|Cytophagia	976|Bacteroidetes	T	Domain present in phytochromes and cGMP-specific phosphodiesterases.	-	-	-	-	-	-	-	-	-	-	-	-	GAF_2,PAS_9
BYD3_k127_4066040_3	1237149.C900_05197	8.165e-07	60.0	2DD3S@1|root,2ZGCT@2|Bacteria,4P77S@976|Bacteroidetes	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_4066040_0	880526.KE386488_gene820	1.271e-85	304.0	COG4249@1|root,COG4249@2|Bacteria,4NNVR@976|Bacteroidetes,2FQ82@200643|Bacteroidia	976|Bacteroidetes	M	Caspase domain	-	-	-	-	-	-	-	-	-	-	-	-	Peptidase_C14,TPR_16
BYD3_k127_4066040_2	997884.HMPREF1068_00730	1.196e-17	94.0	2E9XM@1|root,3343C@2|Bacteria,4NVCJ@976|Bacteroidetes,2FQA6@200643|Bacteroidia,4AMCF@815|Bacteroidaceae	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	DUF4384
BYD3_k127_4066040_1	583355.Caka_0404	3.152e-35	143.0	COG4421@1|root,COG4421@2|Bacteria,46WSB@74201|Verrucomicrobia,3K9XJ@414999|Opitutae	414999|Opitutae	G	Protein of unknown function (DUF563)	-	-	-	-	-	-	-	-	-	-	-	-	DUF563
BYD3_k127_4085837_1	1121904.ARBP01000003_gene6356	2.543e-196	640.0	COG0642@1|root,COG0745@1|root,COG3292@1|root,COG0745@2|Bacteria,COG2205@2|Bacteria,COG3292@2|Bacteria,4NDXU@976|Bacteroidetes,47JBS@768503|Cytophagia	976|Bacteroidetes	T	Two component regulator propeller	-	-	-	-	-	-	-	-	-	-	-	-	HATPase_c,HTH_18,HisKA,Reg_prop,Response_reg,Y_Y_Y
BYD3_k127_4085837_7	86416.Clopa_4154	8.615e-34	134.0	COG0454@1|root,COG0454@2|Bacteria,1VD9I@1239|Firmicutes,24MT9@186801|Clostridia,36N6C@31979|Clostridiaceae	186801|Clostridia	K	acetyltransferase	-	-	-	-	-	-	-	-	-	-	-	-	Acetyltransf_1,Acetyltransf_10,Acetyltransf_7
BYD3_k127_4085837_8	1227488.C477_10013	1.124e-08	63.0	COG5485@1|root,arCOG06513@2157|Archaea,2XYRZ@28890|Euryarchaeota,23WU7@183963|Halobacteria	183963|Halobacteria	S	ester cyclase	-	-	-	-	-	-	-	-	-	-	-	-	SnoaL
BYD3_k127_4085837_3	1122621.ATZA01000031_gene2956	6.638e-90	299.0	COG2318@1|root,COG2318@2|Bacteria,4NMJ9@976|Bacteroidetes,1IRU4@117747|Sphingobacteriia	976|Bacteroidetes	S	Protein of unknown function (DUF1572)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1572
BYD3_k127_4085837_2	1123277.KB893239_gene1238	7.008e-92	308.0	COG1028@1|root,COG1028@2|Bacteria,4NKN7@976|Bacteroidetes,47NB1@768503|Cytophagia	976|Bacteroidetes	IQ	KR domain	-	-	-	-	-	-	-	-	-	-	-	-	adh_short_C2
BYD3_k127_4085837_5	991.IW20_25595	2.169e-74	254.0	COG0454@1|root,COG0456@2|Bacteria,4NMCW@976|Bacteroidetes,1I2KA@117743|Flavobacteriia,2NUZ9@237|Flavobacterium	976|Bacteroidetes	K	Acetyltransferase (GNAT) domain	-	-	-	-	-	-	-	-	-	-	-	-	Acetyltransf_1,Acetyltransf_10
BYD3_k127_4085837_0	700598.Niako_5257	7.428e-246	773.0	COG4805@1|root,COG4805@2|Bacteria,4NFAK@976|Bacteroidetes,1IRKR@117747|Sphingobacteriia	976|Bacteroidetes	S	PFAM Bacterial protein of	-	-	-	-	-	-	-	-	-	-	-	-	DUF885
BYD3_k127_4085837_6	153721.MYP_3136	5.073e-47	175.0	COG0664@1|root,COG0664@2|Bacteria,4NM4K@976|Bacteroidetes,47PUR@768503|Cytophagia	976|Bacteroidetes	K	Cyclic nucleotide-monophosphate binding domain	-	-	-	-	-	-	-	-	-	-	-	-	Crp,cNMP_binding
BYD3_k127_4085837_4	504472.Slin_2160	7.596e-86	293.0	COG4099@1|root,COG4099@2|Bacteria,4NFSH@976|Bacteroidetes,47M41@768503|Cytophagia	976|Bacteroidetes	S	Phospholipase	-	-	-	-	-	-	-	-	-	-	-	-	Abhydrolase_2,DLH,Esterase,Peptidase_S9
BYD3_k127_4099340_2	663321.REG_1016	4.148e-09	57.0	COG3422@1|root,COG3422@2|Bacteria,1P7SM@1224|Proteobacteria,1RQ75@1236|Gammaproteobacteria	1236|Gammaproteobacteria	H	protein of Photorhabdus and some similarities with	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_4099340_1	620914.JH621246_gene2758	1.968e-97	333.0	COG3422@1|root,COG3422@2|Bacteria,4NHE4@976|Bacteroidetes,1I0UZ@117743|Flavobacteriia,2YHEU@290174|Aquimarina	976|Bacteroidetes	S	double-strand break repair	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_4099340_0	620914.JH621246_gene2759	1.024e-201	667.0	COG3299@1|root,COG3299@2|Bacteria,4NF69@976|Bacteroidetes,1HYP7@117743|Flavobacteriia,2YIDG@290174|Aquimarina	976|Bacteroidetes	S	homolog of phage Mu protein gp47	-	-	-	-	-	-	-	-	-	-	-	-	Baseplate_J
BYD3_k127_4125535_2	1237149.C900_05942	2.946e-89	299.0	COG0289@1|root,COG0289@2|Bacteria,4NDX2@976|Bacteroidetes,47KG4@768503|Cytophagia	976|Bacteroidetes	E	Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate	dapB	-	1.17.1.8	ko:K00215	ko00261,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00261,map00300,map01100,map01110,map01120,map01130,map01230	M00016,M00525,M00526,M00527	R04198,R04199	RC00478	ko00000,ko00001,ko00002,ko01000	-	-	-	DapB_C,DapB_N
BYD3_k127_4125535_0	1237149.C900_05943	2.504e-146	474.0	COG0681@1|root,COG0681@2|Bacteria,4NFTP@976|Bacteroidetes,47JH7@768503|Cytophagia	976|Bacteroidetes	U	Belongs to the peptidase S26 family	lepB	-	3.4.21.89	ko:K03100	ko02024,ko03060,map02024,map03060	-	-	-	ko00000,ko00001,ko01000,ko01002	-	-	-	Peptidase_S24,Peptidase_S26
BYD3_k127_4125535_1	1237149.C900_05944	1.355e-112	367.0	COG0692@1|root,COG0692@2|Bacteria,4NE2B@976|Bacteroidetes,47JRB@768503|Cytophagia	976|Bacteroidetes	L	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine	ung	GO:0003674,GO:0003824,GO:0004844,GO:0006139,GO:0006259,GO:0006281,GO:0006284,GO:0006285,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016787,GO:0016798,GO:0016799,GO:0019104,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097506,GO:0097510,GO:0140097,GO:1901360	3.2.2.27	ko:K03648	ko03410,ko05340,map03410,map05340	-	-	-	ko00000,ko00001,ko01000,ko03400	-	-	-	UDG
BYD3_k127_4125535_3	1237149.C900_05945	3.126e-62	219.0	COG2967@1|root,COG2967@2|Bacteria,4NNRA@976|Bacteroidetes,47PP3@768503|Cytophagia	976|Bacteroidetes	P	protein affecting Mg2 Co2 transport	apaG	-	-	ko:K06195	-	-	-	-	ko00000	-	-	-	DUF525
BYD3_k127_4125535_4	643867.Ftrac_0287	4.604e-14	77.0	COG4122@1|root,COG4122@2|Bacteria,4NG1S@976|Bacteroidetes,47N8Y@768503|Cytophagia	976|Bacteroidetes	S	Methyltransferase domain	-	-	-	-	-	-	-	-	-	-	-	-	Methyltransf_24
BYD3_k127_4148618_3	1089547.KB913013_gene2748	2.084e-23	102.0	COG1208@1|root,COG1208@2|Bacteria,4PM6W@976|Bacteroidetes,47MB6@768503|Cytophagia	976|Bacteroidetes	JM	Sugar nucleotidyl transferase	-	-	-	-	-	-	-	-	-	-	-	-	Hexapep,NTP_transf_4
BYD3_k127_4148618_2	643867.Ftrac_2619	9.672e-28	113.0	COG0254@1|root,COG0254@2|Bacteria,4NS7P@976|Bacteroidetes,47R60@768503|Cytophagia	976|Bacteroidetes	J	Ribosomal protein L31	rpmE2	-	-	ko:K02909	ko03010,map03010	M00178	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_L31
BYD3_k127_4148618_0	1237149.C900_03963	2.932e-219	693.0	2DBCF@1|root,2Z8DB@2|Bacteria,4NG6B@976|Bacteroidetes,47JNN@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	Caps_assemb_Wzi
BYD3_k127_4148618_1	1120966.AUBU01000014_gene618	4.879e-214	681.0	COG1132@1|root,COG1132@2|Bacteria,4NE2D@976|Bacteroidetes,47JQI@768503|Cytophagia	976|Bacteroidetes	V	ABC transporter transmembrane region	msbA	-	-	ko:K06147,ko:K11085	ko02010,map02010	-	-	-	ko00000,ko00001,ko01000,ko02000	3.A.1.106,3.A.1.109,3.A.1.21	-	-	ABC_membrane,ABC_tran
BYD3_k127_4148618_4	1408813.AYMG01000005_gene3238	2.298e-22	99.0	COG0614@1|root,COG0614@2|Bacteria,4NR62@976|Bacteroidetes,1IYSX@117747|Sphingobacteriia	976|Bacteroidetes	P	PD-(D/E)XK nuclease superfamily	-	-	-	-	-	-	-	-	-	-	-	-	PDDEXK_3
BYD3_k127_4148618_5	1237149.C900_03967	2.274e-16	79.0	COG0606@1|root,COG0606@2|Bacteria,4NE0G@976|Bacteroidetes,47MUV@768503|Cytophagia	976|Bacteroidetes	O	magnesium chelatase	comM	-	-	ko:K07391	-	-	-	-	ko00000	-	-	-	ChlI,Mg_chelatase,Mg_chelatase_C
BYD3_k127_4165815_1	1150600.ADIARSV_2581	6.294e-119	386.0	COG0477@1|root,COG0477@2|Bacteria,4NFY1@976|Bacteroidetes,1IP90@117747|Sphingobacteriia	976|Bacteroidetes	EGP	transporter	-	-	-	-	-	-	-	-	-	-	-	-	Sugar_tr
BYD3_k127_4165815_0	1237149.C900_00065	4.815e-131	424.0	COG0123@1|root,COG0123@2|Bacteria,4NF3X@976|Bacteroidetes,47KIZ@768503|Cytophagia	976|Bacteroidetes	BQ	PFAM Histone deacetylase domain	-	-	-	-	-	-	-	-	-	-	-	-	Hist_deacetyl
BYD3_k127_4165815_3	1519464.HY22_12800	9.759e-11	68.0	COG3667@1|root,COG3667@2|Bacteria	2|Bacteria	P	copper resistance	copB	-	-	ko:K07233,ko:K07798,ko:K14588	ko02020,map02020	-	-	-	ko00000,ko00001,ko02000	2.A.6.1.4,8.A.1	-	-	CopB,Cu-oxidase,Cu-oxidase_2,Cu-oxidase_3,CusF_Ec,HlyD_D23
BYD3_k127_4165815_2	1237149.C900_00062	1.486e-57	209.0	COG1131@1|root,COG1131@2|Bacteria,4NHPD@976|Bacteroidetes,47KQD@768503|Cytophagia	976|Bacteroidetes	V	ABC-2 type transporter	-	-	-	-	-	-	-	-	-	-	-	-	ABC2_membrane,ABC_tran,TerB
BYD3_k127_4168504_5	1237149.C900_01452	1.076e-43	172.0	COG4932@1|root,COG4932@2|Bacteria	2|Bacteria	M	domain protein	-	-	-	-	-	-	-	-	-	-	-	-	Alpha-L-AF_C,CHU_C,DUF11,DUF5011,Gram_pos_anchor,Laminin_G_3,SdrD_B
BYD3_k127_4168504_2	1237149.C900_05081	1.143e-108	362.0	COG1012@1|root,COG1012@2|Bacteria,4NEEZ@976|Bacteroidetes,47K6Q@768503|Cytophagia	976|Bacteroidetes	C	PFAM Acyl-CoA reductase (LuxC)	-	-	-	-	-	-	-	-	-	-	-	-	LuxC
BYD3_k127_4168504_3	1279009.ADICEAN_01172	9.605e-64	220.0	COG0437@1|root,COG0437@2|Bacteria,4PKQE@976|Bacteroidetes,47XYY@768503|Cytophagia	976|Bacteroidetes	C	4Fe-4S binding domain	fdx	-	-	-	-	-	-	-	-	-	-	-	Fer4_7,Fer4_8
BYD3_k127_4168504_1	1237149.C900_05083	3.189e-117	384.0	COG1721@1|root,COG1721@2|Bacteria,4NG0C@976|Bacteroidetes,47JTH@768503|Cytophagia	976|Bacteroidetes	S	protein (some members contain a von Willebrand factor type A (vWA) domain)	-	-	-	-	-	-	-	-	-	-	-	-	DUF58
BYD3_k127_4168504_4	1237149.C900_05084	2.592e-47	172.0	2ASD9@1|root,31HSR@2|Bacteria,4NQ71@976|Bacteroidetes,47R7K@768503|Cytophagia	976|Bacteroidetes	S	Protein of unknown function (DUF3276)	-	-	-	-	-	-	-	-	-	-	-	-	DUF3276
BYD3_k127_4168504_0	643867.Ftrac_2892	1.762e-182	576.0	COG0012@1|root,COG0012@2|Bacteria,4NF7N@976|Bacteroidetes,47KXT@768503|Cytophagia	976|Bacteroidetes	J	ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner	ychF	-	-	ko:K06942	-	-	-	-	ko00000,ko03009	-	-	-	MMR_HSR1,YchF-GTPase_C
BYD3_k127_4168504_6	1124780.ANNU01000066_gene375	9.172e-12	66.0	COG1583@1|root,COG1583@2|Bacteria,4NJ54@976|Bacteroidetes,47MMT@768503|Cytophagia	976|Bacteroidetes	L	PFAM CRISPR associated protein Cas6	-	-	-	ko:K19091	-	-	-	-	ko00000,ko01000,ko02048	-	-	-	Cas_Cas6
BYD3_k127_4184547_0	1123248.KB893340_gene2675	1.115e-119	392.0	COG0003@1|root,COG0003@2|Bacteria,4NNW8@976|Bacteroidetes	976|Bacteroidetes	D	Anion-transporting ATPase	-	-	3.6.3.16	ko:K01551	-	-	-	-	ko00000,ko01000,ko02000	3.A.19.1,3.A.21.1,3.A.4.1	-	-	ArsA_ATPase
BYD3_k127_4184547_5	1046627.BZARG_1761	2.51e-23	105.0	2F4GJ@1|root,33X6I@2|Bacteria,4P3KU@976|Bacteroidetes,1I98P@117743|Flavobacteriia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_4184547_2	153721.MYP_3777	1.952e-52	192.0	COG4704@1|root,COG4704@2|Bacteria	2|Bacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	Fib_succ_major
BYD3_k127_4184547_1	880073.Calab_0104	1.155e-105	356.0	COG0644@1|root,COG0644@2|Bacteria,2NQ4F@2323|unclassified Bacteria	2|Bacteria	C	TIGRFAM geranylgeranyl reductase	-	-	1.3.99.38	ko:K21401	-	-	-	-	ko00000,ko01000	-	-	-	FAD_binding_3
BYD3_k127_4184547_3	1121094.KB894663_gene1066	9.561e-38	160.0	COG0810@1|root,COG1629@1|root,COG4219@1|root,COG0810@2|Bacteria,COG4219@2|Bacteria,COG4771@2|Bacteria,4NDWS@976|Bacteroidetes,2FNCU@200643|Bacteroidia,4ANSE@815|Bacteroidaceae	976|Bacteroidetes	KT	COG NOG25147 non supervised orthologous group	-	-	-	-	-	-	-	-	-	-	-	-	CarbopepD_reg_2,Peptidase_M56,Plug,TonB_C
BYD3_k127_4184547_4	1123277.KB893243_gene270	1.506e-36	141.0	COG3682@1|root,COG3682@2|Bacteria,4NNVM@976|Bacteroidetes,47Q5Z@768503|Cytophagia	976|Bacteroidetes	K	PFAM Penicillinase repressor	-	-	-	-	-	-	-	-	-	-	-	-	Penicillinase_R
BYD3_k127_4200427_3	1250232.JQNJ01000001_gene1766	5.195e-28	127.0	COG1680@1|root,COG1680@2|Bacteria,4NEVS@976|Bacteroidetes,1HY9H@117743|Flavobacteriia	976|Bacteroidetes	V	Beta-lactamase class C and other penicillin binding	-	-	-	-	-	-	-	-	-	-	-	-	Beta-lactamase
BYD3_k127_4200427_0	1185876.BN8_02312	5.024e-148	484.0	COG1680@1|root,COG1680@2|Bacteria,4NEVS@976|Bacteroidetes,47JKN@768503|Cytophagia	976|Bacteroidetes	V	Beta-lactamase class C and other penicillin binding	-	-	-	-	-	-	-	-	-	-	-	-	Beta-lactamase,YdjC
BYD3_k127_4200427_1	1279009.ADICEAN_00998	3.901e-137	446.0	COG1473@1|root,COG1473@2|Bacteria,4NGBI@976|Bacteroidetes,47KGA@768503|Cytophagia	976|Bacteroidetes	S	PFAM Peptidase family M20 M25 M40	amaA	-	-	ko:K01436	-	-	-	-	ko00000,ko01000,ko01002	-	-	-	M20_dimer,Peptidase_M20
BYD3_k127_4200427_2	1122605.KB893637_gene3179	3.679e-67	234.0	COG4733@1|root,COG4733@2|Bacteria,4PMVV@976|Bacteroidetes	976|Bacteroidetes	S	Protein of unknown function (DUF2961)	-	-	-	-	-	-	-	-	-	-	-	-	DUF2961
BYD3_k127_4299750_0	1296415.JACC01000030_gene2778	1.57e-132	446.0	COG0457@1|root,COG2972@1|root,COG0457@2|Bacteria,COG2972@2|Bacteria,4NF45@976|Bacteroidetes,1HXAW@117743|Flavobacteriia,2YGNW@290174|Aquimarina	976|Bacteroidetes	T	Tetratricopeptide repeat	-	-	-	-	-	-	-	-	-	-	-	-	His_kinase,TPR_10,TPR_12,TPR_7,TPR_8
BYD3_k127_4299750_1	1296415.JACC01000030_gene2779	2.184e-81	277.0	COG3279@1|root,COG3279@2|Bacteria,4NFPV@976|Bacteroidetes,1I0QN@117743|Flavobacteriia,2YJJY@290174|Aquimarina	976|Bacteroidetes	T	LytTr DNA-binding domain	-	-	-	ko:K02477	-	-	-	-	ko00000,ko02022	-	-	-	LytTR,Response_reg
BYD3_k127_4329332_2	909663.KI867150_gene971	2.916e-101	335.0	COG2204@1|root,COG2204@2|Bacteria,1MU0N@1224|Proteobacteria,42M03@68525|delta/epsilon subdivisions,2X1VS@28221|Deltaproteobacteria,2MRES@213462|Syntrophobacterales	28221|Deltaproteobacteria	T	Bacterial regulatory protein, Fis family	-	-	-	-	-	-	-	-	-	-	-	-	HTH_8,Response_reg,Sigma54_activat
BYD3_k127_4329332_10	909663.KI867150_gene887	5.437e-06	53.0	299YV@1|root,2ZX0J@2|Bacteria,1P75H@1224|Proteobacteria,432SS@68525|delta/epsilon subdivisions,2WY0Q@28221|Deltaproteobacteria,2MSEU@213462|Syntrophobacterales	28221|Deltaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_4329332_9	869213.JCM21142_41509	2.657e-11	69.0	COG2849@1|root,COG2849@2|Bacteria,4NZNQ@976|Bacteroidetes	976|Bacteroidetes	S	repeat protein	-	-	-	-	-	-	-	-	-	-	-	-	MORN_2
BYD3_k127_4329332_0	1123057.P872_09325	1.119e-296	916.0	COG3119@1|root,COG3119@2|Bacteria,4NHH7@976|Bacteroidetes,47JYR@768503|Cytophagia	976|Bacteroidetes	P	PFAM sulfatase	-	-	-	-	-	-	-	-	-	-	-	-	DUF4976,Sulfatase
BYD3_k127_4329332_4	1189612.A33Q_1989	9.429e-73	259.0	2AB14@1|root,310ER@2|Bacteria,4NNNB@976|Bacteroidetes,47Q4B@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_4329332_1	1123248.KB893327_gene788	6.73e-133	428.0	COG0258@1|root,COG0258@2|Bacteria	2|Bacteria	L	nuclease activity	polA	GO:0003674,GO:0003676,GO:0003677,GO:0003824,GO:0003887,GO:0004518,GO:0004527,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006281,GO:0006284,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008408,GO:0008409,GO:0009058,GO:0009059,GO:0009987,GO:0016740,GO:0016772,GO:0016779,GO:0016787,GO:0016788,GO:0018130,GO:0019438,GO:0033554,GO:0034061,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0071897,GO:0090304,GO:0090305,GO:0097159,GO:0140097,GO:1901360,GO:1901362,GO:1901363,GO:1901576	2.7.7.7	ko:K02335	ko00230,ko00240,ko01100,ko03030,ko03410,ko03420,ko03440,map00230,map00240,map01100,map03030,map03410,map03420,map03440	-	R00375,R00376,R00377,R00378	RC02795	ko00000,ko00001,ko01000,ko03032,ko03400	-	-	-	5_3_exonuc,5_3_exonuc_N,DNA_pol_A,DNA_pol_A_exo1
BYD3_k127_4329332_6	1550091.JROE01000008_gene3605	5.779e-23	100.0	COG1476@1|root,COG1476@2|Bacteria,4NV53@976|Bacteroidetes,1ITX9@117747|Sphingobacteriia	976|Bacteroidetes	K	InterPro IPR001387	-	-	-	ko:K07729	-	-	-	-	ko00000,ko03000	-	-	-	HTH_3
BYD3_k127_4329332_7	525373.HMPREF0766_13378	8.328e-22	100.0	2FD0S@1|root,3453C@2|Bacteria,4P63B@976|Bacteroidetes,1IYZC@117747|Sphingobacteriia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_4329332_3	700598.Niako_1201	4.565e-97	347.0	COG0577@1|root,COG0577@2|Bacteria,4NDUK@976|Bacteroidetes,1INSB@117747|Sphingobacteriia	976|Bacteroidetes	V	TIGRFAM Acidobacterial duplicated orphan permease	-	-	-	ko:K02004	-	M00258	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	FtsX,MacB_PCD
BYD3_k127_4329332_5	1237149.C900_05709	2.986e-70	248.0	COG0583@1|root,COG0583@2|Bacteria,4NGUF@976|Bacteroidetes,47N1G@768503|Cytophagia	976|Bacteroidetes	K	LysR substrate binding domain	-	-	-	ko:K03576	-	-	-	-	ko00000,ko03000	-	-	-	HTH_1,LysR_substrate
BYD3_k127_4329332_8	509635.N824_05895	8.91e-21	94.0	COG1629@1|root,COG4771@2|Bacteria,4NDX3@976|Bacteroidetes,1IPS9@117747|Sphingobacteriia	976|Bacteroidetes	P	TonB-dependent receptor plug domain	-	-	-	-	-	-	-	-	-	-	-	-	CarbopepD_reg_2,Plug,TonB_dep_Rec
BYD3_k127_4332210_5	1237149.C900_03123	2.65e-21	97.0	COG0760@1|root,COG0760@2|Bacteria,4NEW0@976|Bacteroidetes,47JPW@768503|Cytophagia	976|Bacteroidetes	O	peptidyl-prolyl isomerase	surA	-	5.2.1.8	ko:K03771	-	-	-	-	ko00000,ko01000,ko03110	-	-	-	Rotamase,SurA_N_3
BYD3_k127_4332210_2	1237149.C900_03124	1.221e-96	325.0	COG0760@1|root,COG0760@2|Bacteria,4NG2P@976|Bacteroidetes,47NE3@768503|Cytophagia	976|Bacteroidetes	O	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation	-	-	-	-	-	-	-	-	-	-	-	-	Rotamase_2
BYD3_k127_4332210_1	1237149.C900_03125	6.263e-183	593.0	COG0760@1|root,COG0760@2|Bacteria,4NGIR@976|Bacteroidetes,47K78@768503|Cytophagia	976|Bacteroidetes	O	peptidyl-prolyl isomerase	-	-	5.2.1.8	ko:K03771	-	-	-	-	ko00000,ko01000,ko03110	-	-	-	Rotamase,Rotamase_2,Rotamase_3
BYD3_k127_4332210_3	1237149.C900_03126	1.441e-39	151.0	COG2172@1|root,COG2172@2|Bacteria,4NV3J@976|Bacteroidetes,47RU2@768503|Cytophagia	976|Bacteroidetes	T	PFAM Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase	-	-	2.7.11.1	ko:K04757	-	-	-	-	ko00000,ko01000,ko01001,ko03021	-	-	-	HATPase_c_2
BYD3_k127_4332210_4	1237149.C900_03127	1.793e-36	140.0	COG1366@1|root,COG1366@2|Bacteria,4NVHQ@976|Bacteroidetes,47RVX@768503|Cytophagia	976|Bacteroidetes	T	Belongs to the anti-sigma-factor antagonist family	-	-	-	ko:K04749	-	-	-	-	ko00000,ko03021	-	-	-	STAS
BYD3_k127_4332210_0	1237149.C900_03128	4.944e-255	803.0	COG2208@1|root,COG2208@2|Bacteria,4NJMJ@976|Bacteroidetes,47JNJ@768503|Cytophagia	976|Bacteroidetes	KT	PFAM Stage II sporulation protein E (SpoIIE)	-	-	-	-	-	-	-	-	-	-	-	-	GAF_2,SpoIIE
BYD3_k127_4337937_2	338966.Ppro_2456	7.601e-13	79.0	COG1305@1|root,COG1305@2|Bacteria	2|Bacteria	E	Transglutaminase-like superfamily	-	-	-	-	-	-	-	-	-	-	-	-	DUF3488,DUF4129,Transglut_core
BYD3_k127_4337937_0	344747.PM8797T_06040	3.527e-126	415.0	COG0477@1|root,COG2814@2|Bacteria,2J534@203682|Planctomycetes	203682|Planctomycetes	EGP	MFS_1 like family	-	-	-	-	-	-	-	-	-	-	-	-	Nuc_H_symport
BYD3_k127_4337937_1	1333523.L593_06520	2.796e-99	333.0	COG1082@1|root,arCOG01900@2157|Archaea	2157|Archaea	G	PFAM Xylose isomerase domain protein TIM barrel	-	-	-	-	-	-	-	-	-	-	-	-	AP_endonuc_2
BYD3_k127_4340751_24	1121875.KB907547_gene3142	6.05e-17	80.0	COG0852@1|root,COG0852@2|Bacteria,4NPZH@976|Bacteroidetes,1I1PJ@117743|Flavobacteriia	976|Bacteroidetes	C	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient	nuoC	-	1.6.5.3	ko:K00332	ko00190,ko01100,map00190,map01100	M00144	R11945	RC00061	ko00000,ko00001,ko00002,ko01000	3.D.1	-	-	Complex1_30kDa
BYD3_k127_4340751_5	313603.FB2170_07949	3.402e-148	477.0	COG0649@1|root,COG0649@2|Bacteria,4NF02@976|Bacteroidetes,1HZMG@117743|Flavobacteriia	976|Bacteroidetes	C	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient	nuoD	-	1.6.5.3	ko:K00333,ko:K13378	ko00190,ko01100,map00190,map01100	M00144	R11945	RC00061	ko00000,ko00001,ko00002,ko01000	3.D.1	-	-	Complex1_30kDa,Complex1_49kDa,NiFeSe_Hases
BYD3_k127_4340751_6	1121129.KB903359_gene1191	1.307e-145	469.0	COG1005@1|root,COG1005@2|Bacteria,4NGK7@976|Bacteroidetes,2FNVC@200643|Bacteroidia,22VY1@171551|Porphyromonadaceae	976|Bacteroidetes	C	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone	nuoH	-	1.6.5.3	ko:K00337	ko00190,ko01100,map00190,map01100	M00144	R11945	RC00061	ko00000,ko00001,ko00002,ko01000	3.D.1	-	-	NADHdh
BYD3_k127_4340751_16	1236514.BAKL01000084_gene4841	6.669e-48	177.0	COG1143@1|root,COG1143@2|Bacteria,4NI9I@976|Bacteroidetes,2FQYT@200643|Bacteroidia,4AP5Q@815|Bacteroidaceae	976|Bacteroidetes	C	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient	nuoI	-	1.6.5.3	ko:K00338	ko00190,ko01100,map00190,map01100	M00144	R11945	RC00061	ko00000,ko00001,ko00002,ko01000	3.D.1	-	-	Fer4,Fer4_7
BYD3_k127_4340751_20	1211813.CAPH01000009_gene83	1.052e-36	145.0	COG0839@1|root,COG0839@2|Bacteria,4NP2V@976|Bacteroidetes,2FPHK@200643|Bacteroidia	976|Bacteroidetes	C	Belongs to the complex I subunit 6 family	ndhG	-	1.6.5.3	ko:K00339	ko00190,ko01100,map00190,map01100	M00144	R11945	RC00061	ko00000,ko00001,ko00002,ko01000	3.D.1	-	-	Oxidored_q3
BYD3_k127_4340751_21	1408473.JHXO01000002_gene3882	1.14e-31	127.0	COG0713@1|root,COG0713@2|Bacteria,4NR5Y@976|Bacteroidetes,2G3CR@200643|Bacteroidia	976|Bacteroidetes	C	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient	nuoK	-	1.6.5.3	ko:K00340	ko00190,ko01100,map00190,map01100	M00144	R11945	RC00061	ko00000,ko00001,ko00002,ko01000	3.D.1	-	-	Oxidored_q2
BYD3_k127_4340751_1	1517682.HW49_10535	6.069e-254	797.0	COG1009@1|root,COG1009@2|Bacteria,4NEBM@976|Bacteroidetes,2FPCT@200643|Bacteroidia,22WP8@171551|Porphyromonadaceae	976|Bacteroidetes	CP	NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus	nuoL	-	1.6.5.3	ko:K00341	ko00190,ko01100,map00190,map01100	M00144	R11945	RC00061	ko00000,ko00001,ko00002,ko01000	3.D.1	-	-	Proton_antipo_M,Proton_antipo_N
BYD3_k127_4340751_3	1349822.NSB1T_06985	4.947e-212	668.0	COG1008@1|root,COG1008@2|Bacteria,4NEJ1@976|Bacteroidetes,2FNXD@200643|Bacteroidia,22W5I@171551|Porphyromonadaceae	976|Bacteroidetes	C	NADH dehydrogenase	nuoM	-	1.6.5.3	ko:K00342	ko00190,ko01100,map00190,map01100	M00144	R11945	RC00061	ko00000,ko00001,ko00002,ko01000	3.D.1	-	-	Proton_antipo_M
BYD3_k127_4340751_4	313603.FB2170_07914	1.92e-148	483.0	COG1007@1|root,COG1007@2|Bacteria,4NF94@976|Bacteroidetes,1HYY8@117743|Flavobacteriia	976|Bacteroidetes	C	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient	nuoN	-	1.6.5.3	ko:K00343	ko00190,ko01100,map00190,map01100	M00144	R11945	RC00061	ko00000,ko00001,ko00002,ko01000	3.D.1	-	-	Proton_antipo_M
BYD3_k127_4340751_14	269798.CHU_0701	4.718e-60	210.0	COG0614@1|root,COG0614@2|Bacteria,4NQ88@976|Bacteroidetes,47QDM@768503|Cytophagia	976|Bacteroidetes	P	PD-(D/E)XK nuclease superfamily	-	-	-	-	-	-	-	-	-	-	-	-	PDDEXK_3
BYD3_k127_4340751_2	1191523.MROS_1977	3.527e-225	714.0	COG0674@1|root,COG1014@1|root,COG0674@2|Bacteria,COG1014@2|Bacteria	2|Bacteria	C	Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin	korA	GO:0003674,GO:0003824,GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0016020,GO:0016491,GO:0030312,GO:0044464,GO:0050896,GO:0055114,GO:0071944	1.2.7.11,1.2.7.3	ko:K00174	ko00010,ko00020,ko00620,ko00650,ko00720,ko01100,ko01120,ko01130,ko01200,map00010,map00020,map00620,map00650,map00720,map01100,map01120,map01130,map01200	M00009,M00011,M00173,M00620	R01196,R01197	RC00004,RC02742,RC02833	br01601,ko00000,ko00001,ko00002,ko01000	-	-	-	PFOR_II,POR,POR_N
BYD3_k127_4340751_8	518766.Rmar_0336	1.817e-124	408.0	COG1013@1|root,COG1013@2|Bacteria,4NIE0@976|Bacteroidetes,1FIT9@1100069|Bacteroidetes Order II. Incertae sedis	976|Bacteroidetes	C	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain	oorB	-	1.2.7.11,1.2.7.3	ko:K00175	ko00010,ko00020,ko00620,ko00650,ko00720,ko01100,ko01120,ko01130,ko01200,map00010,map00020,map00620,map00650,map00720,map01100,map01120,map01130,map01200	M00009,M00011,M00173,M00620	R01196,R01197	RC00004,RC02742,RC02833	br01601,ko00000,ko00001,ko00002,ko01000	-	-	-	TPP_enzyme_C
BYD3_k127_4340751_7	1121904.ARBP01000002_gene6757	3.694e-137	444.0	28H6T@1|root,2Z7J4@2|Bacteria,4NE4C@976|Bacteroidetes,47K71@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_4340751_13	1121904.ARBP01000002_gene6756	1.152e-65	228.0	COG0716@1|root,COG0716@2|Bacteria,4NQ9B@976|Bacteroidetes	976|Bacteroidetes	C	Low-potential electron donor to a number of redox enzymes	-	-	-	ko:K03839	-	-	-	-	ko00000	-	-	-	Flavodoxin_1
BYD3_k127_4340751_9	1121904.ARBP01000002_gene6755	3.817e-123	406.0	COG0167@1|root,COG0167@2|Bacteria,4NJVM@976|Bacteroidetes,47XN7@768503|Cytophagia	976|Bacteroidetes	F	Dihydroorotate dehydrogenase	-	-	1.3.98.1	ko:K00226	ko00240,ko01100,map00240,map01100	M00051	R01867	RC00051	ko00000,ko00001,ko00002,ko01000	-	-	-	DHO_dh
BYD3_k127_4340751_0	1121904.ARBP01000002_gene6754	0.0	1607.0	COG0674@1|root,COG1013@1|root,COG1014@1|root,COG0674@2|Bacteria,COG1013@2|Bacteria,COG1014@2|Bacteria,4NF4F@976|Bacteroidetes	976|Bacteroidetes	C	Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin	nifJ	-	1.2.7.1	ko:K03737	ko00010,ko00020,ko00620,ko00650,ko00720,ko01100,ko01120,ko01130,ko01200,map00010,map00020,map00620,map00650,map00720,map01100,map01120,map01130,map01200	M00173,M00307	R01196,R10866	RC00004,RC02742	br01601,ko00000,ko00001,ko00002,ko01000	-	-	-	EKR,Fer4_16,Fer4_7,PFOR_II,POR,POR_N,TPP_enzyme_C
BYD3_k127_4340751_10	1185876.BN8_06457	9.353e-104	347.0	COG2207@1|root,COG2207@2|Bacteria,4NRBA@976|Bacteroidetes,47S2G@768503|Cytophagia	976|Bacteroidetes	K	Arabinose-binding domain of AraC transcription regulator, N-term	-	-	-	-	-	-	-	-	-	-	-	-	Arabinose_bd,HTH_18
BYD3_k127_4340751_18	1123277.KB893178_gene2653	1.858e-40	161.0	COG3631@1|root,COG3631@2|Bacteria,4NQEU@976|Bacteroidetes,47SPB@768503|Cytophagia	976|Bacteroidetes	S	SnoaL-like domain	-	-	-	ko:K06893	-	-	-	-	ko00000	-	-	-	SnoaL_2
BYD3_k127_4340751_23	1341181.FLJC2902T_29270	4.628e-20	90.0	COG3119@1|root,COG3119@2|Bacteria,4NEBN@976|Bacteroidetes,1HZSK@117743|Flavobacteriia,2NSFP@237|Flavobacterium	976|Bacteroidetes	P	Sulfatase	-	-	3.1.6.1	ko:K01130	ko00140,ko00600,map00140,map00600	-	R03980,R04856	RC00128,RC00231	ko00000,ko00001,ko01000	-	-	-	Sulfatase
BYD3_k127_4340751_15	929556.Solca_3822	5.1e-58	206.0	COG1522@1|root,COG1522@2|Bacteria,4NR3Z@976|Bacteroidetes,1ITIE@117747|Sphingobacteriia	976|Bacteroidetes	K	helix_turn_helix ASNC type	-	-	-	-	-	-	-	-	-	-	-	-	AsnC_trans_reg,HTH_24,HTH_AsnC-type
BYD3_k127_4340751_22	929556.Solca_3824	7.3e-26	109.0	COG0520@1|root,COG0520@2|Bacteria,4NJ4E@976|Bacteroidetes,1IQHG@117747|Sphingobacteriia	976|Bacteroidetes	E	PFAM aminotransferase class V	-	-	-	-	-	-	-	-	-	-	-	-	Aminotran_5
BYD3_k127_4340751_25	929556.Solca_3824	1.45e-14	75.0	COG0520@1|root,COG0520@2|Bacteria,4NJ4E@976|Bacteroidetes,1IQHG@117747|Sphingobacteriia	976|Bacteroidetes	E	PFAM aminotransferase class V	-	-	-	-	-	-	-	-	-	-	-	-	Aminotran_5
BYD3_k127_4340751_19	991.IW20_22625	2.895e-39	148.0	COG3813@1|root,COG3813@2|Bacteria,4NTD7@976|Bacteroidetes,1I4CJ@117743|Flavobacteriia	976|Bacteroidetes	S	Protein of unknown function (DUF1272)	-	-	-	ko:K09984	-	-	-	-	ko00000	-	-	-	DUF1272
BYD3_k127_4340751_17	1250005.PHEL85_1611	1.808e-46	169.0	COG0662@1|root,COG0662@2|Bacteria,4NS6V@976|Bacteroidetes,1I30K@117743|Flavobacteriia,3VWIM@52959|Polaribacter	976|Bacteroidetes	G	Cupin domain	-	-	-	-	-	-	-	-	-	-	-	-	Cupin_2
BYD3_k127_4340751_11	1185876.BN8_03539	7.938e-91	301.0	COG0577@1|root,COG0577@2|Bacteria,4NDW7@976|Bacteroidetes,47N35@768503|Cytophagia	976|Bacteroidetes	V	FtsX-like permease family	-	-	-	-	-	-	-	-	-	-	-	-	FtsX,MacB_PCD
BYD3_k127_4342140_10	1408473.JHXO01000005_gene1617	1.868e-52	188.0	COG1819@1|root,COG1819@2|Bacteria,4NFYF@976|Bacteroidetes	976|Bacteroidetes	CG	glycosyl transferase	-	-	-	-	-	-	-	-	-	-	-	-	Glyco_trans_1_3
BYD3_k127_4342140_15	1237149.C900_02544	4.831e-31	124.0	COG1819@1|root,COG1819@2|Bacteria,4NFYF@976|Bacteroidetes,47XWY@768503|Cytophagia	976|Bacteroidetes	CG	Glycosyl transferase family 1	-	-	-	-	-	-	-	-	-	-	-	-	Glyco_trans_1_3
BYD3_k127_4342140_4	1237149.C900_02545	1.633e-136	439.0	COG2908@1|root,COG2908@2|Bacteria,4NFD8@976|Bacteroidetes,47MNV@768503|Cytophagia	976|Bacteroidetes	S	Calcineurin-like phosphoesterase superfamily domain	-	-	-	-	-	-	-	-	-	-	-	-	Metallophos,Metallophos_2
BYD3_k127_4342140_8	1237149.C900_03416	2.837e-82	278.0	COG0220@1|root,COG0220@2|Bacteria,4NG4V@976|Bacteroidetes,47JY6@768503|Cytophagia	976|Bacteroidetes	J	Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA	trmB	GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008176,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016423,GO:0016740,GO:0016741,GO:0030488,GO:0032259,GO:0032991,GO:0034470,GO:0034641,GO:0034660,GO:0034708,GO:0036265,GO:0043170,GO:0043412,GO:0043414,GO:0043527,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0106004,GO:0140098,GO:0140101,GO:1901360,GO:1902494,GO:1990234	2.1.1.33	ko:K03439	-	-	-	-	ko00000,ko01000,ko03016	-	-	-	Methyltransf_4
BYD3_k127_4342140_3	866536.Belba_3019	1.451e-148	482.0	COG0285@1|root,COG0285@2|Bacteria,4NES8@976|Bacteroidetes,47K0F@768503|Cytophagia	976|Bacteroidetes	H	Belongs to the folylpolyglutamate synthase family	folC	-	6.3.2.12,6.3.2.17	ko:K11754	ko00790,ko01100,map00790,map01100	M00126,M00841	R00942,R02237,R04241	RC00064,RC00090,RC00162	ko00000,ko00001,ko00002,ko01000	-	-	-	Mur_ligase_M
BYD3_k127_4342140_16	1185876.BN8_00750	1.277e-17	84.0	2EBEV@1|root,335FG@2|Bacteria,4NWFJ@976|Bacteroidetes,47S0U@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_4342140_13	1237149.C900_03418	4.302e-40	160.0	COG3170@1|root,COG3170@2|Bacteria,4PKQP@976|Bacteroidetes,47JDN@768503|Cytophagia	976|Bacteroidetes	NU	Tfp pilus assembly protein FimV	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_4342140_11	1237149.C900_03419	2.447e-46	172.0	COG0848@1|root,COG0848@2|Bacteria,4NNI6@976|Bacteroidetes,47R2X@768503|Cytophagia	976|Bacteroidetes	U	Biopolymer transport protein ExbD TolR	exbD	-	-	ko:K03559	-	-	-	-	ko00000,ko02000	1.A.30.2.1	-	-	ExbD
BYD3_k127_4342140_7	1237149.C900_03420	2.757e-98	325.0	COG0811@1|root,COG0811@2|Bacteria,4NFIX@976|Bacteroidetes,47N0M@768503|Cytophagia	976|Bacteroidetes	U	PFAM MotA TolQ ExbB proton channel	exbB	-	-	ko:K03561	-	-	-	-	ko00000,ko02000	1.A.30.2.1	-	-	MotA_ExbB
BYD3_k127_4342140_12	1237149.C900_03421	9.325e-45	172.0	COG3087@1|root,COG3087@2|Bacteria,4NVU5@976|Bacteroidetes,47S99@768503|Cytophagia	976|Bacteroidetes	D	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides	-	-	-	-	-	-	-	-	-	-	-	-	SPOR
BYD3_k127_4342140_2	1237149.C900_03422	2.848e-158	517.0	COG4206@1|root,COG4206@2|Bacteria,4NGYD@976|Bacteroidetes,47JSU@768503|Cytophagia	976|Bacteroidetes	H	Psort location OuterMembrane, score	-	-	-	-	-	-	-	-	-	-	-	-	TonB_dep_Rec
BYD3_k127_4342140_0	1237149.C900_03423	2.468e-314	992.0	COG0457@1|root,COG1729@1|root,COG0457@2|Bacteria,COG1729@2|Bacteria,4NE4W@976|Bacteroidetes,47JS4@768503|Cytophagia	976|Bacteroidetes	S	Tetratricopeptide repeat	-	-	-	-	-	-	-	-	-	-	-	-	TPR_16,TPR_2,TPR_21,TPR_6,TPR_8
BYD3_k127_4342140_5	1237149.C900_03424	2.621e-128	418.0	COG1466@1|root,COG1466@2|Bacteria,4NEIB@976|Bacteroidetes,47M1Q@768503|Cytophagia	976|Bacteroidetes	L	TIGRFAM DNA polymerase III, delta subunit	holA	-	2.7.7.7	ko:K02340	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	M00260	R00375,R00376,R00377,R00378	RC02795	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	-	-	-	DNA_pol3_delta
BYD3_k127_4342140_9	1237149.C900_03426	2.588e-56	202.0	COG0705@1|root,COG0705@2|Bacteria,4NGT3@976|Bacteroidetes,47R0S@768503|Cytophagia	976|Bacteroidetes	S	Rhomboid family	-	-	-	-	-	-	-	-	-	-	-	-	Rhomboid
BYD3_k127_4342140_1	1237149.C900_03428	1.333e-216	679.0	COG2204@1|root,COG2204@2|Bacteria,4NE89@976|Bacteroidetes,47NKU@768503|Cytophagia	976|Bacteroidetes	T	Sigma-54 interaction domain	-	-	-	-	-	-	-	-	-	-	-	-	Response_reg,Sigma54_activat
BYD3_k127_4342140_6	1237149.C900_03429	7.737e-120	392.0	COG0642@1|root,COG0642@2|Bacteria,4NJVF@976|Bacteroidetes,47Y2W@768503|Cytophagia	976|Bacteroidetes	T	His Kinase A (phosphoacceptor) domain	-	-	-	-	-	-	-	-	-	-	-	-	HATPase_c,HisKA,Hpt,Reg_prop,Response_reg
BYD3_k127_4364816_5	1237149.C900_01231	1.629e-11	64.0	COG3417@1|root,COG3417@2|Bacteria,4NFXF@976|Bacteroidetes,47Q1R@768503|Cytophagia	976|Bacteroidetes	M	Peptidoglycan-synthase activator LpoB	-	-	-	ko:K07337	-	-	-	-	ko00000	-	-	-	LpoB
BYD3_k127_4364816_1	1237149.C900_01232	1.539e-166	536.0	COG3014@1|root,COG3014@2|Bacteria,4NIIU@976|Bacteroidetes,47K7B@768503|Cytophagia	976|Bacteroidetes	S	protein conserved in bacteria	-	-	-	ko:K09859	-	-	-	-	ko00000	-	-	-	TPR_2
BYD3_k127_4364816_2	1237149.C900_01235	4.585e-98	332.0	2EG6T@1|root,339YP@2|Bacteria,4NXNK@976|Bacteroidetes,47T48@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_4364816_0	1237149.C900_04189	0.0	1319.0	COG0188@1|root,COG0188@2|Bacteria,4NDWQ@976|Bacteroidetes,47K30@768503|Cytophagia	976|Bacteroidetes	L	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner	gyrA	-	5.99.1.3	ko:K02469	-	-	-	-	ko00000,ko01000,ko03032,ko03400	-	-	-	DNA_gyraseA_C,DNA_topoisoIV
BYD3_k127_4364816_4	1237149.C900_04190	3.803e-85	296.0	COG0457@1|root,COG0457@2|Bacteria,4NFHT@976|Bacteroidetes,47PQF@768503|Cytophagia	976|Bacteroidetes	S	Tetratricopeptide repeat	-	-	-	-	-	-	-	-	-	-	-	-	TPR_1,TPR_11,TPR_16,TPR_17,TPR_19,TPR_2,TPR_8
BYD3_k127_4364816_3	1237149.C900_00334	3.165e-90	304.0	COG1596@1|root,COG1596@2|Bacteria,4NFXJ@976|Bacteroidetes,47Q2A@768503|Cytophagia	976|Bacteroidetes	M	Polysaccharide biosynthesis/export protein	-	-	-	ko:K01991	ko02026,map02026	-	-	-	ko00000,ko00001,ko02000	1.B.18	-	-	Poly_export,SLBB
BYD3_k127_4389987_3	1237149.C900_03938	5.732e-21	100.0	COG1729@1|root,COG1729@2|Bacteria,4PP99@976|Bacteroidetes,47VYS@768503|Cytophagia	976|Bacteroidetes	S	Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division	-	-	-	-	-	-	-	-	-	-	-	-	WG_beta_rep
BYD3_k127_4389987_0	1237149.C900_02383	4.728e-220	692.0	28KRY@1|root,2ZA9E@2|Bacteria,4NI1H@976|Bacteroidetes,47N4R@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_4389987_2	1237149.C900_02382	3.106e-56	199.0	COG0784@1|root,COG0784@2|Bacteria,4NRC9@976|Bacteroidetes,47QC7@768503|Cytophagia	976|Bacteroidetes	T	cheY-homologous receiver domain	-	-	-	-	-	-	-	-	-	-	-	-	Response_reg
BYD3_k127_4389987_1	1237149.C900_02381	1.707e-204	640.0	COG1012@1|root,COG1012@2|Bacteria,4NFPJ@976|Bacteroidetes,47JJR@768503|Cytophagia	976|Bacteroidetes	C	Belongs to the aldehyde dehydrogenase family	pcd	-	1.2.1.3	ko:K00128	ko00010,ko00053,ko00071,ko00280,ko00310,ko00330,ko00340,ko00380,ko00410,ko00561,ko00620,ko00625,ko00903,ko00981,ko01100,ko01110,ko01120,ko01130,map00010,map00053,map00071,map00280,map00310,map00330,map00340,map00380,map00410,map00561,map00620,map00625,map00903,map00981,map01100,map01110,map01120,map01130	M00135	R00264,R00631,R00710,R00904,R01752,R01986,R02549,R02678,R02940,R02957,R03283,R03869,R04065,R04506,R04903,R05050,R05237,R05238,R05286,R06366,R08146	RC00047,RC00071,RC00080,RC00186,RC00218,RC00242,RC00816,RC01500	ko00000,ko00001,ko00002,ko01000	-	-	-	Aldedh
BYD3_k127_4392723_3	1279009.ADICEAN_02833	2.225e-80	271.0	COG0436@1|root,COG0436@2|Bacteria,4NFUY@976|Bacteroidetes,47MC8@768503|Cytophagia	976|Bacteroidetes	E	Aminotransferase class I and II	-	-	-	-	-	-	-	-	-	-	-	-	Aminotran_1_2
BYD3_k127_4392723_2	1358423.N180_09305	1.175e-117	386.0	COG0115@1|root,COG0115@2|Bacteria,4NI83@976|Bacteroidetes,1IPAA@117747|Sphingobacteriia	976|Bacteroidetes	E	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family	ilvE	-	2.6.1.42	ko:K00826	ko00270,ko00280,ko00290,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00270,map00280,map00290,map00770,map01100,map01110,map01130,map01210,map01230	M00019,M00036,M00119,M00570	R01090,R01214,R02199,R10991	RC00006,RC00036	ko00000,ko00001,ko00002,ko01000,ko01007	-	-	-	Aminotran_4
BYD3_k127_4392723_0	1338011.BD94_3411	1.329e-286	887.0	COG0129@1|root,COG0129@2|Bacteria,4NFHP@976|Bacteroidetes,1HX1X@117743|Flavobacteriia,34PMN@308865|Elizabethkingia	976|Bacteroidetes	E	Catalyzes the dehydration of 2,3-dihydroxy-3-methylbutanoate to 3-methyl-2-oxobutanoate in valine and isoleucine biosynthesis	ilvD	-	4.2.1.9	ko:K01687	ko00290,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00290,map00770,map01100,map01110,map01130,map01210,map01230	M00019,M00570	R01209,R04441,R05070	RC00468,RC01714	ko00000,ko00001,ko00002,ko01000	-	-	-	ILVD_EDD
BYD3_k127_4392723_1	485918.Cpin_1921	5.588e-248	777.0	COG0028@1|root,COG0028@2|Bacteria,4NENG@976|Bacteroidetes,1IPTP@117747|Sphingobacteriia	976|Bacteroidetes	EH	Acetolactate synthase, large subunit	ilvB	-	2.2.1.6	ko:K01652	ko00290,ko00650,ko00660,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00290,map00650,map00660,map00770,map01100,map01110,map01130,map01210,map01230	M00019,M00570	R00006,R00014,R00226,R03050,R04672,R04673,R08648	RC00027,RC00106,RC01192,RC02744,RC02893	ko00000,ko00001,ko00002,ko01000	-	-	-	TPP_enzyme_C,TPP_enzyme_M,TPP_enzyme_N
BYD3_k127_440728_7	1237149.C900_02622	1.425e-41	157.0	COG0508@1|root,COG0508@2|Bacteria,4NED0@976|Bacteroidetes,47JDY@768503|Cytophagia	976|Bacteroidetes	C	Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex	bfmBB	-	2.3.1.61	ko:K00658	ko00020,ko00310,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00310,map01100,map01110,map01120,map01130,map01200	M00009,M00011,M00032	R02570,R02571,R08549	RC00004,RC02727,RC02833	br01601,ko00000,ko00001,ko00002,ko01000	-	-	-	2-oxoacid_dh,Biotin_lipoyl,E3_binding
BYD3_k127_440728_0	1237149.C900_02623	2.413e-164	526.0	COG1058@1|root,COG1546@1|root,COG1058@2|Bacteria,COG1546@2|Bacteria,4NDVV@976|Bacteroidetes,47JN4@768503|Cytophagia	976|Bacteroidetes	S	CinA-like protein	cinA	-	3.5.1.42	ko:K03742,ko:K03743	ko00760,map00760	-	R02322	RC00100	ko00000,ko00001,ko01000	-	-	-	CinA,MoCF_biosynth
BYD3_k127_440728_1	760192.Halhy_0614	7.34e-163	522.0	COG1304@1|root,COG1304@2|Bacteria,4NEBK@976|Bacteroidetes,1IQVM@117747|Sphingobacteriia	976|Bacteroidetes	C	FMN-dependent dehydrogenase	lldD	-	1.1.2.3,1.13.12.4	ko:K00101,ko:K00467	ko00620,ko01100,map00620,map01100	-	R00196,R00319	RC00044,RC01312	ko00000,ko00001,ko01000	-	-	-	FMN_dh
BYD3_k127_440728_4	1237149.C900_02624	2.472e-108	355.0	2C8XG@1|root,2Z7PK@2|Bacteria,4NEU8@976|Bacteroidetes,47P85@768503|Cytophagia	976|Bacteroidetes	S	Protein of unknown function (DUF4197)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4197
BYD3_k127_440728_3	1237149.C900_02626	9.146e-138	442.0	COG1012@1|root,COG1012@2|Bacteria	2|Bacteria	C	belongs to the aldehyde dehydrogenase family	paaN	-	-	-	-	-	-	-	-	-	-	-	Aldedh
BYD3_k127_440728_2	1237149.C900_02626	1.801e-138	443.0	COG1012@1|root,COG1012@2|Bacteria	2|Bacteria	C	belongs to the aldehyde dehydrogenase family	paaN	-	-	-	-	-	-	-	-	-	-	-	Aldedh
BYD3_k127_440728_5	926549.KI421517_gene1735	1.048e-95	317.0	28KW5@1|root,2ZACI@2|Bacteria,4P15K@976|Bacteroidetes	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_440728_8	760192.Halhy_3108	1.594e-24	108.0	COG5646@1|root,COG5646@2|Bacteria,4NW3X@976|Bacteroidetes,1IZMU@117747|Sphingobacteriia	976|Bacteroidetes	S	Domain of unknown function (DU1801)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1801
BYD3_k127_440728_6	234267.Acid_5671	3.317e-62	222.0	COG2423@1|root,COG2423@2|Bacteria,3Y82U@57723|Acidobacteria	57723|Acidobacteria	E	PFAM ornithine cyclodeaminase mu-crystallin	-	-	4.3.1.12	ko:K01750	ko00330,ko01110,ko01130,ko01230,map00330,map01110,map01130,map01230	-	R00671	RC00354	ko00000,ko00001,ko01000	-	-	-	OCD_Mu_crystall
BYD3_k127_4410714_4	1120965.AUBV01000007_gene2566	2.072e-30	124.0	COG1393@1|root,COG1393@2|Bacteria	2|Bacteria	P	arsenate reductase (glutaredoxin) activity	arsC	GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464	1.20.4.1	ko:K00537	-	-	-	-	ko00000,ko01000	-	-	-	ArsC
BYD3_k127_4410714_3	1026882.MAMP_01931	3.308e-33	134.0	2EDAV@1|root,33776@2|Bacteria	2|Bacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_4410714_1	204669.Acid345_1385	1.035e-118	386.0	COG0479@1|root,COG0479@2|Bacteria,3Y70A@57723|Acidobacteria,2JM7N@204432|Acidobacteriia	204432|Acidobacteriia	C	2Fe-2S iron-sulfur cluster binding domain	-	-	1.3.5.1,1.3.5.4	ko:K00240	ko00020,ko00190,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00190,map00650,map00720,map01100,map01110,map01120,map01130,map01200	M00009,M00011,M00149,M00173,M00374,M00376	R02164	RC00045	ko00000,ko00001,ko00002,ko01000	-	-	-	Fer2_3,Fer4_8
BYD3_k127_4410714_0	204669.Acid345_1384	6.179e-297	920.0	COG1053@1|root,COG1053@2|Bacteria,3Y6IU@57723|Acidobacteria,2JKAD@204432|Acidobacteriia	204432|Acidobacteriia	C	Fumarate reductase flavoprotein C-term	-	-	1.3.5.1,1.3.5.4	ko:K00239	ko00020,ko00190,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko05134,map00020,map00190,map00650,map00720,map01100,map01110,map01120,map01130,map01200,map05134	M00009,M00011,M00149,M00173,M00374,M00376	R02164	RC00045	ko00000,ko00001,ko00002,ko01000	-	-	-	FAD_binding_2,Succ_DH_flav_C
BYD3_k127_4410714_2	656024.FsymDg_1434	6.091e-53	193.0	2CEY7@1|root,2Z8CG@2|Bacteria,2GKI0@201174|Actinobacteria,4ES2J@85013|Frankiales	201174|Actinobacteria	S	membrane	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_4410714_5	204669.Acid345_1383	3.471e-17	82.0	2CEY7@1|root,2Z8CG@2|Bacteria,3Y70V@57723|Acidobacteria,2JKPR@204432|Acidobacteriia	204432|Acidobacteriia	S	membrane	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_4423320_5	1121926.AXWO01000002_gene1433	1.038e-16	81.0	2CMJR@1|root,32SF0@2|Bacteria,2IQBS@201174|Actinobacteria,4EZTX@85014|Glycomycetales	201174|Actinobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_4423320_3	1237149.C900_05317	5.996e-78	273.0	COG2972@1|root,COG2972@2|Bacteria,4NFDP@976|Bacteroidetes,47N4N@768503|Cytophagia	976|Bacteroidetes	T	PFAM histidine kinase internal region	-	-	-	-	-	-	-	-	-	-	-	-	His_kinase
BYD3_k127_4423320_2	1237149.C900_05318	9.328e-86	291.0	COG3279@1|root,COG3279@2|Bacteria,4NGBF@976|Bacteroidetes,47MTX@768503|Cytophagia	976|Bacteroidetes	KT	Response regulator of the LytR AlgR family	-	-	-	-	-	-	-	-	-	-	-	-	LytTR,Response_reg
BYD3_k127_4423320_4	1121373.KB903663_gene1023	4.455e-27	115.0	COG3437@1|root,COG3437@2|Bacteria,4PKM8@976|Bacteroidetes,47XWF@768503|Cytophagia	976|Bacteroidetes	T	cheY-homologous receiver domain	-	-	-	-	-	-	-	-	-	-	-	-	Response_reg
BYD3_k127_4423320_1	1237149.C900_05257	3.686e-99	332.0	29N3N@1|root,33SHJ@2|Bacteria,4P1XQ@976|Bacteroidetes,47TMQ@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_4423320_0	1237149.C900_05256	1.012e-249	783.0	COG1131@1|root,COG1131@2|Bacteria,4NHPD@976|Bacteroidetes,47KQD@768503|Cytophagia	976|Bacteroidetes	V	ABC-2 type transporter	-	-	-	-	-	-	-	-	-	-	-	-	ABC2_membrane,ABC_tran,TerB
BYD3_k127_44298_0	1237149.C900_04468	0.0	1027.0	COG0449@1|root,COG0449@2|Bacteria,4NE8Q@976|Bacteroidetes,47KVG@768503|Cytophagia	976|Bacteroidetes	M	Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source	glmS	GO:0003674,GO:0003824,GO:0004360,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006002,GO:0006040,GO:0006047,GO:0006139,GO:0006464,GO:0006486,GO:0006487,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008483,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009225,GO:0009987,GO:0016740,GO:0016769,GO:0019538,GO:0019637,GO:0034641,GO:0034645,GO:0036211,GO:0043170,GO:0043412,GO:0043413,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0055086,GO:0070085,GO:0070548,GO:0071704,GO:1901135,GO:1901137,GO:1901360,GO:1901564,GO:1901566,GO:1901576	2.6.1.16	ko:K00820	ko00250,ko00520,ko01100,ko01130,ko04931,map00250,map00520,map01100,map01130,map04931	-	R00768	RC00010,RC00163,RC02752	ko00000,ko00001,ko01000,ko01002	-	-	-	GATase_6,SIS
BYD3_k127_44298_1	1237149.C900_04444	5.283e-184	584.0	COG1473@1|root,COG1473@2|Bacteria,4NGBI@976|Bacteroidetes,47KGA@768503|Cytophagia	976|Bacteroidetes	S	PFAM Peptidase family M20 M25 M40	amaA	-	-	ko:K01436	-	-	-	-	ko00000,ko01000,ko01002	-	-	-	M20_dimer,Peptidase_M20
BYD3_k127_44298_2	1380600.AUYN01000009_gene1864	1.973e-06	53.0	COG2010@1|root,COG2133@1|root,COG2010@2|Bacteria,COG2133@2|Bacteria,4NEJ0@976|Bacteroidetes,1IJAB@117743|Flavobacteriia	976|Bacteroidetes	CG	Domain of Unknown Function (DUF1080)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1080,PA14
BYD3_k127_4435494_1	1237149.C900_01088	1.822e-190	612.0	COG1452@1|root,COG1452@2|Bacteria,4NFWD@976|Bacteroidetes,47JIS@768503|Cytophagia	976|Bacteroidetes	M	Organic solvent tolerance protein OstA	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_4435494_6	1237149.C900_01089	3.692e-104	346.0	COG0860@1|root,COG0860@2|Bacteria,4NGKC@976|Bacteroidetes,47M2P@768503|Cytophagia	976|Bacteroidetes	M	N-acetylmuramoyl-L-alanine amidase	amiA	-	3.5.1.28	ko:K01448	ko01503,map01503	M00727	R04112	RC00064,RC00141	ko00000,ko00001,ko00002,ko01000,ko01011,ko03036	-	-	-	Amidase_3
BYD3_k127_4435494_7	1237149.C900_01090	3.963e-78	272.0	COG1463@1|root,COG1463@2|Bacteria,4NHT9@976|Bacteroidetes,47MMF@768503|Cytophagia	976|Bacteroidetes	Q	Mammalian cell entry related domain protein	-	-	-	ko:K02067	ko02010,map02010	M00210,M00669,M00670	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.27	-	-	MlaD
BYD3_k127_4435494_0	1237149.C900_01092	4.687e-300	928.0	COG4799@1|root,COG4799@2|Bacteria,4NEMJ@976|Bacteroidetes,47JYJ@768503|Cytophagia	976|Bacteroidetes	I	Acetyl-CoA carboxylase carboxyltransferase component (subunits alpha and beta)	accD5	-	-	-	-	-	-	-	-	-	-	-	Carboxyl_trans
BYD3_k127_4435494_4	1237149.C900_01093	3.275e-128	415.0	COG2912@1|root,COG2912@2|Bacteria,4NF8R@976|Bacteroidetes,47JJ3@768503|Cytophagia	976|Bacteroidetes	S	Transglutaminase-like superfamily	-	-	-	-	-	-	-	-	-	-	-	-	Transglut_core2
BYD3_k127_4435494_2	1237149.C900_05585	2.08e-180	582.0	COG2885@1|root,COG2885@2|Bacteria,4NEND@976|Bacteroidetes,47MW3@768503|Cytophagia	976|Bacteroidetes	M	Belongs to the ompA family	-	-	-	-	-	-	-	-	-	-	-	-	CarboxypepD_reg,OmpA,PD40,RicinB_lectin_2
BYD3_k127_4435494_3	1048983.EL17_13265	5.303e-138	448.0	COG2133@1|root,COG2133@2|Bacteria,4NEZC@976|Bacteroidetes,47KSC@768503|Cytophagia	976|Bacteroidetes	G	PFAM Glucose Sorbosone dehydrogenase	-	-	-	ko:K21430	-	-	-	-	ko00000,ko01000	-	-	-	GSDH
BYD3_k127_4435494_9	1048983.EL17_24180	4.624e-34	134.0	COG1943@1|root,COG1943@2|Bacteria,4NNQJ@976|Bacteroidetes,47PWF@768503|Cytophagia	976|Bacteroidetes	L	Transposase IS200 like	-	-	-	-	-	-	-	-	-	-	-	-	Y1_Tnp
BYD3_k127_4435494_8	1469557.JSWF01000034_gene836	2.225e-37	149.0	COG4929@1|root,COG4929@2|Bacteria,4NQB4@976|Bacteroidetes,1I3Q6@117743|Flavobacteriia	976|Bacteroidetes	S	GDYXXLXY protein	-	-	-	-	-	-	-	-	-	-	-	-	GDYXXLXY
BYD3_k127_4435494_5	927658.AJUM01000024_gene2500	3.231e-109	367.0	COG4872@1|root,COG4872@2|Bacteria,4NIK7@976|Bacteroidetes	976|Bacteroidetes	S	Predicted membrane protein (DUF2157)	-	-	-	-	-	-	-	-	-	-	-	-	DUF2157
BYD3_k127_4437180_1	1237149.C900_04704	5.863e-81	276.0	COG4797@1|root,COG4797@2|Bacteria,4PKQS@976|Bacteroidetes,47K4H@768503|Cytophagia	976|Bacteroidetes	D	Motility related/secretion protein	sprA	-	-	-	-	-	-	-	-	-	-	-	SprA_N
BYD3_k127_4437180_4	1237149.C900_04704	1.778e-47	172.0	COG4797@1|root,COG4797@2|Bacteria,4PKQS@976|Bacteroidetes,47K4H@768503|Cytophagia	976|Bacteroidetes	D	Motility related/secretion protein	sprA	-	-	-	-	-	-	-	-	-	-	-	SprA_N
BYD3_k127_4437180_3	1150600.ADIARSV_1827	1.494e-52	189.0	COG0509@1|root,COG0509@2|Bacteria,4NQ35@976|Bacteroidetes,1IT1E@117747|Sphingobacteriia	976|Bacteroidetes	E	The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein	gcvH	-	-	ko:K02437	ko00260,ko00630,ko01100,ko01110,ko01130,ko01200,map00260,map00630,map01100,map01110,map01130,map01200	M00532	R01221	RC00022,RC02834	ko00000,ko00001,ko00002	-	-	-	GCV_H
BYD3_k127_4437180_0	1237149.C900_01774	2.272e-162	514.0	COG0320@1|root,COG0320@2|Bacteria,4NEB5@976|Bacteroidetes,47JGZ@768503|Cytophagia	976|Bacteroidetes	H	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives	lipA	-	2.8.1.8	ko:K03644	ko00785,ko01100,map00785,map01100	-	R07767,R07768	RC01978	ko00000,ko00001,ko01000	-	-	-	LIAS_N,Radical_SAM
BYD3_k127_4437180_5	1237149.C900_02852	1.106e-46	174.0	2E0QA@1|root,32W90@2|Bacteria,4NUC6@976|Bacteroidetes,47RSZ@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_4437180_6	743722.Sph21_1140	6.052e-26	109.0	COG1254@1|root,COG1254@2|Bacteria,4NVB4@976|Bacteroidetes,1ITWQ@117747|Sphingobacteriia	976|Bacteroidetes	C	Belongs to the acylphosphatase family	acyP	-	3.6.1.7	ko:K01512	ko00620,ko00627,ko01120,map00620,map00627,map01120	-	R00317,R01421,R01515	RC00043	ko00000,ko00001,ko01000	-	-	-	Acylphosphatase
BYD3_k127_4437180_2	378806.STAUR_3216	5.256e-75	254.0	COG1012@1|root,COG1012@2|Bacteria,1R3TA@1224|Proteobacteria,42PG8@68525|delta/epsilon subdivisions,2WKCP@28221|Deltaproteobacteria,2YXAX@29|Myxococcales	28221|Deltaproteobacteria	C	Aldehyde dehydrogenase family	-	-	1.2.1.9	ko:K00131	ko00010,ko00030,ko01100,ko01120,ko01200,map00010,map00030,map01100,map01120,map01200	M00308,M00633	R01058	RC00242	ko00000,ko00001,ko00002,ko01000	-	-	-	Aldedh
BYD3_k127_4445201_1	1237149.C900_00706	2.008e-128	415.0	COG0323@1|root,COG0323@2|Bacteria,4NDWJ@976|Bacteroidetes,47KZU@768503|Cytophagia	976|Bacteroidetes	L	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex	mutL	GO:0003674,GO:0003676,GO:0003677,GO:0003697,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0032300,GO:0032991,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1990391	-	ko:K03572	ko03430,map03430	-	-	-	ko00000,ko00001,ko03400	-	-	-	DNA_mis_repair,HATPase_c_3,MutL_C
BYD3_k127_4445201_2	385682.AFSL01000055_gene412	1.013e-06	56.0	2DI87@1|root,302BG@2|Bacteria,4PJBM@976|Bacteroidetes,2G282@200643|Bacteroidia,3XKAK@558415|Marinilabiliaceae	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_4445201_0	1237149.C900_00708	2.366e-200	651.0	COG1472@1|root,COG1680@1|root,COG1472@2|Bacteria,COG1680@2|Bacteria,4NET8@976|Bacteroidetes,47K15@768503|Cytophagia	976|Bacteroidetes	G	Glycosyl hydrolase family 3 N terminal domain	-	-	-	-	-	-	-	-	-	-	-	-	Beta-lactamase,Glyco_hydro_3,Glyco_hydro_3_C
BYD3_k127_4451871_6	1124780.ANNU01000019_gene1681	1.346e-54	196.0	COG0346@1|root,COG0346@2|Bacteria,4NNGG@976|Bacteroidetes,47PQ6@768503|Cytophagia	976|Bacteroidetes	E	PFAM Glyoxalase bleomycin resistance protein dioxygenase	mce	-	5.1.99.1	ko:K05606	ko00280,ko00630,ko00640,ko00720,ko01100,ko01120,ko01200,map00280,map00630,map00640,map00720,map01100,map01120,map01200	M00373,M00375,M00376,M00741	R02765,R09979	RC00780,RC02739	ko00000,ko00001,ko00002,ko01000	-	-	-	Glyoxalase_4
BYD3_k127_4451871_4	643867.Ftrac_1574	1.973e-59	208.0	2BJ0K@1|root,32D95@2|Bacteria,4NQN9@976|Bacteroidetes,47QR4@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_4451871_5	1279009.ADICEAN_03325	1.233e-54	192.0	COG0316@1|root,COG0316@2|Bacteria,4NQC8@976|Bacteroidetes,47QAX@768503|Cytophagia	976|Bacteroidetes	S	Belongs to the HesB IscA family	iscA	-	-	ko:K13628	-	-	-	-	ko00000,ko03016	-	-	-	Fe-S_biosyn
BYD3_k127_4451871_3	1237149.C900_04977	1.455e-67	231.0	COG0251@1|root,COG0251@2|Bacteria,4NMHF@976|Bacteroidetes,47PT2@768503|Cytophagia	976|Bacteroidetes	J	Endoribonuclease L-PSP	-	-	3.5.99.5	ko:K15067	ko00380,map00380	-	R03887	RC01015	ko00000,ko00001,ko01000	-	-	-	Ribonuc_L-PSP
BYD3_k127_4451871_7	1121957.ATVL01000012_gene650	2.893e-51	194.0	COG5266@1|root,COG5266@2|Bacteria,4NQ8X@976|Bacteroidetes,47QXS@768503|Cytophagia	976|Bacteroidetes	P	Domain of unknown function (DUF4198)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4198
BYD3_k127_4451871_1	1237149.C900_04979	3.186e-190	602.0	COG0006@1|root,COG0006@2|Bacteria,4NG40@976|Bacteroidetes,47MAV@768503|Cytophagia	976|Bacteroidetes	E	Belongs to the peptidase M24B family	pepP	-	3.4.11.9	ko:K01262	-	-	-	-	ko00000,ko01000,ko01002	-	-	-	AMP_N,Peptidase_M24
BYD3_k127_4451871_0	1121904.ARBP01000001_gene5864	6.906e-219	686.0	COG3669@1|root,COG3669@2|Bacteria,4NE74@976|Bacteroidetes,47KQM@768503|Cytophagia	976|Bacteroidetes	G	Alpha-L-fucosidase	fucA	-	3.2.1.51	ko:K01206	ko00511,map00511	-	-	-	ko00000,ko00001,ko01000,ko04147	-	GH29	-	Alpha_L_fucos
BYD3_k127_4451871_9	929556.Solca_0474	2.693e-29	125.0	COG2318@1|root,COG2318@2|Bacteria,4NNW4@976|Bacteroidetes,1IT5S@117747|Sphingobacteriia	976|Bacteroidetes	S	DinB superfamily	-	-	-	-	-	-	-	-	-	-	-	-	DinB_2
BYD3_k127_4451871_12	84531.JMTZ01000056_gene2553	9.679e-23	106.0	COG3832@1|root,COG3832@2|Bacteria,1RDMX@1224|Proteobacteria,1S914@1236|Gammaproteobacteria,1XC1N@135614|Xanthomonadales	135614|Xanthomonadales	KT	Polyketide cyclase / dehydrase and lipid transport	-	-	-	-	-	-	-	-	-	-	-	-	GyrI-like,Polyketide_cyc2
BYD3_k127_4451871_8	1121904.ARBP01000001_gene5999	8.36e-33	130.0	2C4KB@1|root,32YM4@2|Bacteria,4NUZU@976|Bacteroidetes,47RBT@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_4451871_2	1237149.C900_04984	1.221e-123	404.0	28JI8@1|root,2Z9BM@2|Bacteria,4NE5E@976|Bacteroidetes,47JAX@768503|Cytophagia	976|Bacteroidetes	S	S1 P1 nuclease	-	-	-	-	-	-	-	-	-	-	-	-	S1-P1_nuclease,Zn_dep_PLPC
BYD3_k127_4451871_10	1189612.A33Q_1767	8.758e-29	118.0	COG0268@1|root,COG0268@2|Bacteria,4NSB1@976|Bacteroidetes,47R98@768503|Cytophagia	976|Bacteroidetes	J	Binds directly to 16S ribosomal RNA	rpsT	-	-	ko:K02968	ko03010,map03010	M00178	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_S20p
BYD3_k127_4451871_13	929703.KE386491_gene4244	4.851e-05	46.0	COG2003@1|root,COG2003@2|Bacteria,4NFBF@976|Bacteroidetes,47KTY@768503|Cytophagia	976|Bacteroidetes	E	Belongs to the UPF0758 family	radC	-	-	ko:K03630	-	-	-	-	ko00000	-	-	-	RadC
BYD3_k127_4456615_8	471854.Dfer_0110	3.835e-42	156.0	COG2755@1|root,COG2755@2|Bacteria,4NHV1@976|Bacteroidetes,47KAU@768503|Cytophagia	976|Bacteroidetes	E	GDSL-like Lipase/Acylhydrolase	-	-	-	-	-	-	-	-	-	-	-	-	Lipase_GDSL_2
BYD3_k127_4456615_4	1121904.ARBP01000019_gene2715	6.625e-97	339.0	COG0642@1|root,COG2202@1|root,COG4251@1|root,COG2202@2|Bacteria,COG2205@2|Bacteria,COG4251@2|Bacteria,4PNTS@976|Bacteroidetes	976|Bacteroidetes	T	His Kinase A (phosphoacceptor) domain	-	-	2.7.13.3	ko:K07646	ko02020,map02020	M00454	-	-	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	-	-	-	HATPase_c,HisKA,PAS_4
BYD3_k127_4456615_5	761193.Runsl_5236	1.592e-84	285.0	COG4977@1|root,COG4977@2|Bacteria,4NHHE@976|Bacteroidetes,47N5H@768503|Cytophagia	976|Bacteroidetes	K	DJ-1/PfpI family	-	-	-	-	-	-	-	-	-	-	-	-	DJ-1_PfpI
BYD3_k127_4456615_6	1279009.ADICEAN_04058	6.633e-70	245.0	COG0545@1|root,COG0545@2|Bacteria,4NDW4@976|Bacteroidetes,47K8M@768503|Cytophagia	976|Bacteroidetes	O	Domain amino terminal to FKBP-type peptidyl-prolyl isomerase	fklB	-	5.2.1.8	ko:K03772,ko:K03773	-	-	-	-	ko00000,ko01000,ko03110	-	-	-	FKBP_C,FKBP_N
BYD3_k127_4456615_1	388413.ALPR1_13360	1.245e-152	490.0	COG4225@1|root,COG4225@2|Bacteria,4NJYK@976|Bacteroidetes,47MFS@768503|Cytophagia	976|Bacteroidetes	S	Glycosyl Hydrolase Family 88	-	-	3.2.1.180	ko:K18581	-	-	R10867	RC00049,RC02427	ko00000,ko01000	-	GH88	-	Glyco_hydro_88
BYD3_k127_4456615_7	641524.ADICYQ_3610	4.502e-63	218.0	COG4225@1|root,COG4225@2|Bacteria,4NJYK@976|Bacteroidetes,47MFS@768503|Cytophagia	976|Bacteroidetes	S	Glycosyl Hydrolase Family 88	-	-	3.2.1.180	ko:K18581	-	-	R10867	RC00049,RC02427	ko00000,ko01000	-	GH88	-	Glyco_hydro_88
BYD3_k127_4456615_0	1120965.AUBV01000003_gene400	1.794e-220	692.0	COG1902@1|root,COG1902@2|Bacteria,4NG0N@976|Bacteroidetes,47JNR@768503|Cytophagia	976|Bacteroidetes	C	NADH:flavin oxidoreductase / NADH oxidase family	-	-	-	-	-	-	-	-	-	-	-	-	Oxidored_FMN
BYD3_k127_4456615_3	929562.Emtol_1153	3.768e-99	329.0	COG1028@1|root,COG1028@2|Bacteria,4NHVK@976|Bacteroidetes,47K2F@768503|Cytophagia	976|Bacteroidetes	IQ	PFAM Short-chain dehydrogenase reductase SDR	-	-	-	-	-	-	-	-	-	-	-	-	adh_short_C2
BYD3_k127_4456615_2	1123248.KB893359_gene2089	1.231e-145	473.0	COG2133@1|root,COG2133@2|Bacteria,4PIUD@976|Bacteroidetes,1IXS9@117747|Sphingobacteriia	976|Bacteroidetes	G	Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella	-	-	-	-	-	-	-	-	-	-	-	-	VCBS
BYD3_k127_4456615_9	1220582.RRU01S_13_00160	5.157e-11	68.0	COG1120@1|root,COG1120@2|Bacteria	2|Bacteria	HP	ATPase activity	-	-	3.6.3.34	ko:K02013,ko:K02071,ko:K03546	ko02010,map02010	M00238,M00240	-	-	ko00000,ko00001,ko00002,ko01000,ko02000,ko03400	3.A.1.14,3.A.1.24	-	-	AAA_15,AAA_21,ABC_tran
BYD3_k127_4457148_0	1237149.C900_04746	4.201e-223	698.0	2CD20@1|root,2Z7SQ@2|Bacteria,4NEQ1@976|Bacteroidetes,47MEQ@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_4457148_3	1279009.ADICEAN_01915	5.269e-87	291.0	COG4445@1|root,COG4445@2|Bacteria,4NFY4@976|Bacteroidetes,47P6J@768503|Cytophagia	976|Bacteroidetes	FJ	Hydroxylase for synthesis of 2-methylthio-cis-ribozeatin in tRNA	miaE	-	-	ko:K06169	-	-	-	-	ko00000,ko01000,ko03016	-	-	-	MiaE
BYD3_k127_4457148_1	1237149.C900_04748	5.578e-164	537.0	COG4206@1|root,COG4206@2|Bacteria,4NI2R@976|Bacteroidetes,47JRI@768503|Cytophagia	976|Bacteroidetes	H	Putative porin	-	-	-	-	-	-	-	-	-	-	-	-	Porin_10
BYD3_k127_4457148_2	153721.MYP_534	8.885e-104	347.0	COG1663@1|root,COG1663@2|Bacteria,4NE2I@976|Bacteroidetes,47M44@768503|Cytophagia	976|Bacteroidetes	M	Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1- P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA)	lpxK	-	2.7.1.130	ko:K00912	ko00540,ko01100,map00540,map01100	M00060	R04657	RC00002,RC00078	ko00000,ko00001,ko00002,ko01000,ko01005	-	-	-	LpxK
BYD3_k127_4457148_4	1120966.AUBU01000005_gene3773	6.098e-55	196.0	COG0327@1|root,COG0327@2|Bacteria,4NF51@976|Bacteroidetes,47JGH@768503|Cytophagia	976|Bacteroidetes	S	Belongs to the GTP cyclohydrolase I type 2 NIF3 family	yqfO	-	-	-	-	-	-	-	-	-	-	-	NIF3
BYD3_k127_4457888_2	929562.Emtol_2560	9.718e-154	493.0	COG4198@1|root,COG4198@2|Bacteria,4NGWT@976|Bacteroidetes,47MM8@768503|Cytophagia	976|Bacteroidetes	S	Starch-binding associating with outer membrane	-	-	-	-	-	-	-	-	-	-	-	-	SusD-like,SusD-like_2
BYD3_k127_4457888_0	700598.Niako_4932	0.0	2385.0	COG0085@1|root,COG0085@2|Bacteria,4NF8D@976|Bacteroidetes,1INW0@117747|Sphingobacteriia	976|Bacteroidetes	K	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates	rpoB	GO:0000428,GO:0005575,GO:0005622,GO:0005623,GO:0030880,GO:0032991,GO:0044424,GO:0044464,GO:0061695,GO:1902494,GO:1990234	2.7.7.6	ko:K03043	ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020	M00183	R00435,R00441,R00442,R00443	RC02795	br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400	-	-	-	RNA_pol_Rpb2_1,RNA_pol_Rpb2_2,RNA_pol_Rpb2_3,RNA_pol_Rpb2_45,RNA_pol_Rpb2_6,RNA_pol_Rpb2_7
BYD3_k127_4457888_1	700598.Niako_4931	0.0	1252.0	COG0086@1|root,COG0086@2|Bacteria,4NEMW@976|Bacteroidetes,1IP5J@117747|Sphingobacteriia	976|Bacteroidetes	K	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates	rpoC	GO:0000428,GO:0005575,GO:0005622,GO:0005623,GO:0030880,GO:0032991,GO:0044424,GO:0044464,GO:0061695,GO:1902494,GO:1990234	2.7.7.6	ko:K03046	ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020	M00183	R00435,R00441,R00442,R00443	RC02795	br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400	-	-	-	RNA_pol_Rpb1_1,RNA_pol_Rpb1_2,RNA_pol_Rpb1_3,RNA_pol_Rpb1_4,RNA_pol_Rpb1_5
BYD3_k127_4465599_1	1237149.C900_03476	3.782e-111	364.0	COG1132@1|root,COG1132@2|Bacteria,4NDY6@976|Bacteroidetes,47JPX@768503|Cytophagia	976|Bacteroidetes	V	ABC transporter transmembrane region	mdlA	-	-	ko:K18889	ko02010,map02010	M00707	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.106.13,3.A.1.106.5	-	-	ABC_membrane,ABC_tran
BYD3_k127_4465599_0	1237149.C900_03482	3.011e-292	905.0	COG1132@1|root,COG1132@2|Bacteria,4NEAG@976|Bacteroidetes,47JVG@768503|Cytophagia	976|Bacteroidetes	V	ABC transporter transmembrane region	-	-	-	ko:K18890	ko02010,map02010	M00707	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.106.13,3.A.1.106.5	-	-	ABC_membrane,ABC_tran
BYD3_k127_4465599_3	1237149.C900_03483	3.518e-91	308.0	COG0101@1|root,COG0101@2|Bacteria,4NFDC@976|Bacteroidetes,47KUM@768503|Cytophagia	976|Bacteroidetes	J	Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs	truA	GO:0001522,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016853,GO:0016866,GO:0031119,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:1901360	5.4.99.12	ko:K06173	-	-	-	-	ko00000,ko01000,ko03016	-	-	-	PseudoU_synth_1
BYD3_k127_4465599_2	643867.Ftrac_0716	2.534e-92	307.0	COG0183@1|root,COG0183@2|Bacteria,4NE3Q@976|Bacteroidetes,47JXM@768503|Cytophagia	976|Bacteroidetes	I	Belongs to the thiolase family	-	-	2.3.1.174,2.3.1.9	ko:K00626,ko:K07823	ko00071,ko00072,ko00280,ko00310,ko00362,ko00380,ko00620,ko00630,ko00640,ko00650,ko00720,ko00900,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,ko02020,map00071,map00072,map00280,map00310,map00362,map00380,map00620,map00630,map00640,map00650,map00720,map00900,map01100,map01110,map01120,map01130,map01200,map01212,map02020	M00088,M00095,M00373,M00374,M00375	R00238,R00829,R01177	RC00004,RC00326	ko00000,ko00001,ko00002,ko01000,ko04147	-	-	-	Thiolase_C,Thiolase_N
BYD3_k127_4481022_5	926549.KI421517_gene3351	1.73e-56	200.0	COG0451@1|root,COG0451@2|Bacteria,4NE3U@976|Bacteroidetes,47JUZ@768503|Cytophagia	976|Bacteroidetes	M	PFAM NAD dependent epimerase dehydratase family	-	-	1.1.1.410	ko:K22025	-	-	-	-	ko00000,ko01000	-	-	-	Epimerase
BYD3_k127_4481022_0	1123278.KB893559_gene2968	6.299e-205	647.0	COG2610@1|root,COG2610@2|Bacteria,4NFQH@976|Bacteroidetes,47JEB@768503|Cytophagia	976|Bacteroidetes	EG	H gluconate symporter and related	-	-	-	ko:K03299	-	-	-	-	ko00000,ko02000	2.A.8	-	-	GntP_permease
BYD3_k127_4481022_4	886377.Murru_3015	8.675e-59	215.0	COG2207@1|root,COG2207@2|Bacteria,4NGWC@976|Bacteroidetes,1I08M@117743|Flavobacteriia	976|Bacteroidetes	K	helix_turn_helix, arabinose operon control protein	-	-	-	-	-	-	-	-	-	-	-	-	HTH_18
BYD3_k127_4481022_2	861299.J421_1886	3.828e-99	338.0	COG1960@1|root,COG1960@2|Bacteria	2|Bacteria	I	acyl-CoA dehydrogenase activity	-	-	1.14.13.235	ko:K22027	-	-	-	-	ko00000,ko01000	-	-	-	Acyl-CoA_dh_2,Acyl-CoA_dh_N
BYD3_k127_4481022_1	485918.Cpin_2127	3.939e-131	427.0	COG2114@1|root,COG2114@2|Bacteria,4NKWT@976|Bacteroidetes,1IV7B@117747|Sphingobacteriia	976|Bacteroidetes	T	Protein of unknown function (DUF2652)	-	-	-	-	-	-	-	-	-	-	-	-	DUF2652
BYD3_k127_4481022_6	1157632.AQWQ01000006_gene369	1.778e-10	72.0	COG0596@1|root,COG0596@2|Bacteria,2GK43@201174|Actinobacteria	201174|Actinobacteria	S	Alpha beta hydrolase	-	-	-	-	-	-	-	-	-	-	-	-	Abhydrolase_1,Abhydrolase_6
BYD3_k127_4481022_3	1122621.ATZA01000091_gene2347	1.019e-61	230.0	COG0577@1|root,COG0577@2|Bacteria,4NDUK@976|Bacteroidetes,1IQ0T@117747|Sphingobacteriia	976|Bacteroidetes	V	MacB-like periplasmic core domain	-	-	-	-	-	-	-	-	-	-	-	-	FtsX,MacB_PCD
BYD3_k127_4499256_2	1237149.C900_00621	1.797e-169	537.0	COG0646@1|root,COG0646@2|Bacteria,4NFRF@976|Bacteroidetes,47KPH@768503|Cytophagia	976|Bacteroidetes	E	Homocysteine S-methyltransferase	metH	-	2.1.1.13	ko:K00548	ko00270,ko00450,ko00670,ko01100,ko01110,ko01230,map00270,map00450,map00670,map01100,map01110,map01230	M00017	R00946,R09365	RC00035,RC00113,RC01241	ko00000,ko00001,ko00002,ko01000	-	-	-	B12-binding,B12-binding_2,Met_synt_B12,Pterin_bind,S-methyl_trans
BYD3_k127_4499256_0	1237149.C900_01371	0.0	1305.0	COG1410@1|root,COG1410@2|Bacteria,4PKI8@976|Bacteroidetes,47XZT@768503|Cytophagia	976|Bacteroidetes	E	B12 binding domain	metH	-	2.1.1.13	ko:K00548	ko00270,ko00450,ko00670,ko01100,ko01110,ko01230,map00270,map00450,map00670,map01100,map01110,map01230	M00017	R00946,R09365	RC00035,RC00113,RC01241	ko00000,ko00001,ko00002,ko01000	-	-	-	B12-binding,B12-binding_2,DUF559,Met_synt_B12,Pterin_bind
BYD3_k127_4499256_3	1237149.C900_01372	3.101e-159	507.0	COG0685@1|root,COG0685@2|Bacteria,4NDY0@976|Bacteroidetes,47KQ7@768503|Cytophagia	976|Bacteroidetes	E	Methylenetetrahydrofolate reductase	metF	-	1.5.1.20	ko:K00297	ko00670,ko00720,ko01100,ko01120,ko01200,ko01523,map00670,map00720,map01100,map01120,map01200,map01523	M00377	R01224,R07168	RC00081	ko00000,ko00001,ko00002,ko01000	-	-	-	MTHFR
BYD3_k127_4499256_1	1237149.C900_03624	2.738e-316	987.0	COG0577@1|root,COG0577@2|Bacteria,4NDUK@976|Bacteroidetes,47NTJ@768503|Cytophagia	976|Bacteroidetes	V	MacB-like periplasmic core domain	-	-	-	ko:K02004	-	M00258	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	FtsX,MacB_PCD
BYD3_k127_4499256_4	1237149.C900_01529	4.774e-49	178.0	COG0577@1|root,COG0577@2|Bacteria,4NDUK@976|Bacteroidetes,47JJN@768503|Cytophagia	976|Bacteroidetes	V	FtsX-like permease family	-	-	-	-	-	-	-	-	-	-	-	-	FtsX,MacB_PCD
BYD3_k127_4500761_4	1123277.KB893202_gene6233	3.114e-31	124.0	COG2156@1|root,COG2156@2|Bacteria,4NMME@976|Bacteroidetes,47MSV@768503|Cytophagia	976|Bacteroidetes	P	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit acts as a catalytic chaperone that increases the ATP- binding affinity of the ATP-hydrolyzing subunit KdpB by the formation of a transient KdpB KdpC ATP ternary complex	kdpC	GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0006810,GO:0006811,GO:0006812,GO:0006813,GO:0008150,GO:0008324,GO:0008556,GO:0009987,GO:0015075,GO:0015077,GO:0015079,GO:0015318,GO:0015399,GO:0015405,GO:0015662,GO:0015672,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0030001,GO:0031224,GO:0034220,GO:0042623,GO:0042625,GO:0042626,GO:0043492,GO:0044425,GO:0046873,GO:0051179,GO:0051234,GO:0055085,GO:0071804,GO:0071805,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0099131,GO:0099132	3.6.3.12	ko:K01548	ko02020,map02020	-	-	-	ko00000,ko00001,ko01000	3.A.3.7	-	-	KdpC
BYD3_k127_4500761_2	762903.Pedsa_1587	2.54e-149	480.0	2CB8G@1|root,2Z88H@2|Bacteria,4NF68@976|Bacteroidetes,1IR13@117747|Sphingobacteriia	976|Bacteroidetes	S	Putative beta-barrel porin-2, OmpL-like. bbp2	-	-	-	-	-	-	-	-	-	-	-	-	BBP2
BYD3_k127_4500761_0	1185876.BN8_02585	5.567e-175	555.0	COG0642@1|root,COG2205@2|Bacteria,4NEZM@976|Bacteroidetes,47JJ4@768503|Cytophagia	976|Bacteroidetes	T	Osmosensitive K+ channel His kinase sensor domain	kdpD	-	2.7.13.3	ko:K07646	ko02020,map02020	M00454	-	-	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	-	-	-	KdpD,Usp
BYD3_k127_4500761_1	929556.Solca_3781	1.064e-170	553.0	COG5002@1|root,COG5002@2|Bacteria,4NDTV@976|Bacteroidetes,1IPRG@117747|Sphingobacteriia	976|Bacteroidetes	T	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase	covS	-	-	-	-	-	-	-	-	-	-	-	4HB_MCP_1,HAMP,HATPase_c,HisKA,PAS
BYD3_k127_4500761_3	929556.Solca_1496	2.819e-56	205.0	COG1670@1|root,COG1670@2|Bacteria,4NUGW@976|Bacteroidetes	976|Bacteroidetes	J	GNAT acetyltransferase	-	-	-	-	-	-	-	-	-	-	-	-	GNAT_acetyltran
BYD3_k127_4526754_7	1484460.JSWG01000009_gene8	1.689e-31	127.0	COG0517@1|root,COG0517@2|Bacteria,4NNFS@976|Bacteroidetes,1IJF1@117743|Flavobacteriia	976|Bacteroidetes	S	Domain in cystathionine beta-synthase and other proteins.	-	-	-	-	-	-	-	-	-	-	-	-	CBS
BYD3_k127_4526754_6	1279009.ADICEAN_03797	5.86e-36	141.0	COG0517@1|root,COG0517@2|Bacteria,4NNFS@976|Bacteroidetes	976|Bacteroidetes	S	CBS domain	-	-	-	-	-	-	-	-	-	-	-	-	CBS
BYD3_k127_4526754_2	1121897.AUGO01000006_gene750	1.748e-139	449.0	COG4977@1|root,COG4977@2|Bacteria,4PMWI@976|Bacteroidetes,1IJZW@117743|Flavobacteriia,2P0UG@237|Flavobacterium	976|Bacteroidetes	K	helix_turn_helix, arabinose operon control protein	-	-	-	-	-	-	-	-	-	-	-	-	HTH_18
BYD3_k127_4526754_4	1453505.JASY01000003_gene1959	1.101e-109	360.0	COG1028@1|root,COG1028@2|Bacteria,4NFU6@976|Bacteroidetes,1HYGK@117743|Flavobacteriia,2NT6H@237|Flavobacterium	976|Bacteroidetes	IQ	short-chain dehydrogenase	-	-	-	-	-	-	-	-	-	-	-	-	adh_short_C2
BYD3_k127_4526754_5	929556.Solca_2236	2.064e-60	211.0	COG2010@1|root,COG2010@2|Bacteria,4NRFW@976|Bacteroidetes,1IU4G@117747|Sphingobacteriia	976|Bacteroidetes	C	Cytochrome C oxidase, cbb3-type, subunit III	-	-	-	-	-	-	-	-	-	-	-	-	Cytochrome_CBB3
BYD3_k127_4526754_3	929556.Solca_2235	6.05e-126	409.0	2ECDZ@1|root,336C7@2|Bacteria,4NXCE@976|Bacteroidetes	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_4526754_0	929556.Solca_2234	2.997e-246	764.0	COG5557@1|root,COG5557@2|Bacteria,4NE3X@976|Bacteroidetes,1INKZ@117747|Sphingobacteriia	976|Bacteroidetes	C	PFAM Polysulphide reductase, NrfD	-	-	-	ko:K00185	-	-	-	-	ko00000	5.A.3	-	-	NrfD
BYD3_k127_4526754_1	929556.Solca_2233	3.254e-184	578.0	COG0437@1|root,COG0437@2|Bacteria,4NI8R@976|Bacteroidetes	976|Bacteroidetes	C	4Fe-4S dicluster domain	-	-	-	ko:K00184	-	-	-	-	ko00000	5.A.3	-	-	Fer4_11
BYD3_k127_4533399_0	1239962.C943_00709	4.926e-175	557.0	COG0475@1|root,COG0475@2|Bacteria,4NFPE@976|Bacteroidetes,47NZK@768503|Cytophagia	976|Bacteroidetes	P	Sodium/hydrogen exchanger family	-	-	-	-	-	-	-	-	-	-	-	-	Na_H_Exchanger
BYD3_k127_4533399_1	1237149.C900_00956	5.21e-93	313.0	COG0589@1|root,COG0589@2|Bacteria,4NGG8@976|Bacteroidetes,47T99@768503|Cytophagia	976|Bacteroidetes	T	Universal stress protein family	-	-	-	-	-	-	-	-	-	-	-	-	Usp
BYD3_k127_4533399_2	1237149.C900_00374	5.68e-70	253.0	COG2202@1|root,COG4251@1|root,COG2202@2|Bacteria,COG4251@2|Bacteria	2|Bacteria	T	photoreceptor activity	-	-	-	-	-	-	-	-	-	-	-	-	HATPase_c,HisKA,PAS,PAS_3,PAS_9,Reg_prop,Response_reg,STAS,Y_Y_Y
BYD3_k127_4541943_0	761193.Runsl_2530	0.0	1114.0	COG1629@1|root,COG4771@2|Bacteria,4P1Z5@976|Bacteroidetes,47YE9@768503|Cytophagia	976|Bacteroidetes	P	PFAM TonB-dependent Receptor Plug Domain	-	-	-	-	-	-	-	-	-	-	-	-	CarbopepD_reg_2,Plug,STN,TonB_dep_Rec
BYD3_k127_4541943_3	1250232.JQNJ01000001_gene3522	1.416e-55	207.0	COG2207@1|root,COG2207@2|Bacteria,4NF8Q@976|Bacteroidetes,1I16E@117743|Flavobacteriia	976|Bacteroidetes	K	helix_turn_helix, arabinose operon control protein	-	-	-	-	-	-	-	-	-	-	-	-	HTH_18
BYD3_k127_4541943_2	926549.KI421517_gene1259	1.105e-104	348.0	COG0656@1|root,COG0656@2|Bacteria,4NK47@976|Bacteroidetes,47MZY@768503|Cytophagia	976|Bacteroidetes	S	Aldo/keto reductase family	-	-	-	-	-	-	-	-	-	-	-	-	Aldo_ket_red
BYD3_k127_4541943_1	1237149.C900_00659	3.555e-119	395.0	COG5000@1|root,COG5000@2|Bacteria,4NEWF@976|Bacteroidetes,47JZG@768503|Cytophagia	976|Bacteroidetes	T	Histidine kinase	-	-	-	-	-	-	-	-	-	-	-	-	HATPase_c,PAS_8
BYD3_k127_4555269_2	700598.Niako_2665	1.037e-108	358.0	COG1235@1|root,COG1235@2|Bacteria,4NDVI@976|Bacteroidetes,1IR6D@117747|Sphingobacteriia	976|Bacteroidetes	S	COGs COG1235 Metal-dependent hydrolase of the beta-lactamase superfamily I	vicX	-	-	-	-	-	-	-	-	-	-	-	Lactamase_B,Lactamase_B_2
BYD3_k127_4555269_1	468059.AUHA01000002_gene816	3.153e-126	412.0	COG3673@1|root,COG3673@2|Bacteria,4NHDR@976|Bacteroidetes,1IQ8B@117747|Sphingobacteriia	976|Bacteroidetes	S	Uncharacterized alpha/beta hydrolase domain (DUF2235)	-	-	-	-	-	-	-	-	-	-	-	-	DUF2235
BYD3_k127_4555269_3	143224.JQMD01000002_gene4018	7.863e-55	222.0	2BZ4R@1|root,3344Z@2|Bacteria,4NX0J@976|Bacteroidetes,1I7U3@117743|Flavobacteriia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_4555269_0	1123277.KB893172_gene761	9.546e-165	528.0	COG1680@1|root,COG1680@2|Bacteria,4NGZR@976|Bacteroidetes,47M6K@768503|Cytophagia	976|Bacteroidetes	V	Beta-lactamase class C and other penicillin binding	-	-	-	-	-	-	-	-	-	-	-	-	Beta-lactamase
BYD3_k127_4555269_4	1349822.NSB1T_03820	5.009e-29	126.0	COG1512@1|root,COG1512@2|Bacteria,4NF4P@976|Bacteroidetes,2FN0H@200643|Bacteroidia,22X9Q@171551|Porphyromonadaceae	976|Bacteroidetes	S	TPM domain	-	-	-	ko:K06872	-	-	-	-	ko00000	-	-	-	TPM_phosphatase
BYD3_k127_4555285_0	313603.FB2170_14813	2.948e-223	702.0	COG0484@1|root,COG0484@2|Bacteria,4P0AH@976|Bacteroidetes	976|Bacteroidetes	C	heat shock protein binding	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_4555285_2	313603.FB2170_14818	6.871e-140	455.0	COG0484@1|root,COG0484@2|Bacteria,4NPS0@976|Bacteroidetes	976|Bacteroidetes	C	heat shock protein binding	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_4555285_1	313603.FB2170_14823	2.934e-147	483.0	2919D@1|root,2ZNWG@2|Bacteria,4NMU5@976|Bacteroidetes	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_4555285_4	313603.FB2170_14828	7.882e-70	245.0	28PU4@1|root,2ZCF6@2|Bacteria,4NTXA@976|Bacteroidetes,1I497@117743|Flavobacteriia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_4555285_3	929703.KE386491_gene3153	5.83e-113	374.0	COG3239@1|root,COG3239@2|Bacteria,4NERD@976|Bacteroidetes,47NRC@768503|Cytophagia	976|Bacteroidetes	I	fatty acid desaturase	-	-	1.14.19.3	ko:K00508	ko00591,ko01100,map00591,map01100	-	R07063	RC00917	ko00000,ko00001,ko01000,ko01004	-	-	-	FA_desaturase
BYD3_k127_4555285_5	313606.M23134_00239	1.424e-54	192.0	COG0568@1|root,COG0568@2|Bacteria,4NEBF@976|Bacteroidetes,47JZ7@768503|Cytophagia	976|Bacteroidetes	K	Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released	rpoD	-	-	ko:K03086	-	-	-	-	ko00000,ko03021	-	-	-	Sigma70_r1_2,Sigma70_r2,Sigma70_r3,Sigma70_r4
BYD3_k127_4574232_0	504472.Slin_5194	3.269e-97	323.0	COG2367@1|root,COG2367@2|Bacteria,4PMKC@976|Bacteroidetes,47JSP@768503|Cytophagia	976|Bacteroidetes	V	Beta-lactamase enzyme family	-	-	3.5.2.6	ko:K17836	ko00311,ko01130,ko01501,map00311,map01130,map01501	M00627,M00628	R06363	RC01499	ko00000,ko00001,ko00002,ko01000,ko01504	-	-	-	Beta-lactamase2
BYD3_k127_4574232_2	1237149.C900_02634	2.787e-68	241.0	COG0730@1|root,COG0730@2|Bacteria,4NKPI@976|Bacteroidetes,47PQP@768503|Cytophagia	976|Bacteroidetes	S	Sulfite exporter TauE/SafE	-	-	-	ko:K07090	-	-	-	-	ko00000	-	-	-	TauE
BYD3_k127_4574232_1	1237149.C900_02639	9.686e-96	320.0	COG0300@1|root,COG0300@2|Bacteria,4NEMK@976|Bacteroidetes,47Y2N@768503|Cytophagia	976|Bacteroidetes	S	Belongs to the short-chain dehydrogenases reductases (SDR) family	-	-	-	-	-	-	-	-	-	-	-	-	adh_short
BYD3_k127_4574232_3	1267211.KI669560_gene2599	2.028e-65	226.0	COG0346@1|root,COG0346@2|Bacteria,4NN6H@976|Bacteroidetes,1IZ3C@117747|Sphingobacteriia	976|Bacteroidetes	E	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily	-	-	-	ko:K07032	-	-	-	-	ko00000	-	-	-	Glyoxalase
BYD3_k127_4574232_4	1237149.C900_02640	8.942e-62	217.0	COG0262@1|root,COG0262@2|Bacteria,4NQ2Y@976|Bacteroidetes,47Q9G@768503|Cytophagia	976|Bacteroidetes	H	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis	folA	-	1.5.1.3	ko:K00287	ko00670,ko00790,ko01100,ko01523,map00670,map00790,map01100,map01523	M00126,M00840	R00936,R00937,R00939,R00940,R02235,R02236,R11765	RC00109,RC00110,RC00158	ko00000,ko00001,ko00002,ko01000	-	-	-	2TM,DHFR_1
BYD3_k127_4574232_5	1123277.KB893195_gene5615	1.384e-18	87.0	COG0223@1|root,COG0223@2|Bacteria,4NE8U@976|Bacteroidetes,47JDP@768503|Cytophagia	976|Bacteroidetes	J	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus	fmt	GO:0003674,GO:0003824,GO:0004479,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006412,GO:0006413,GO:0006464,GO:0006518,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016741,GO:0016742,GO:0019538,GO:0019988,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0036211,GO:0043043,GO:0043170,GO:0043412,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0046483,GO:0071704,GO:0071951,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576	2.1.2.9	ko:K00604	ko00670,ko00970,map00670,map00970	-	R03940	RC00026,RC00165	ko00000,ko00001,ko01000	-	-	-	Formyl_trans_C,Formyl_trans_N
BYD3_k127_4600834_1	1346791.M529_12350	0.0004606	51.0	COG5002@1|root,COG5002@2|Bacteria,1R5EN@1224|Proteobacteria,2U4EG@28211|Alphaproteobacteria,2K2HU@204457|Sphingomonadales	204457|Sphingomonadales	T	CHASE3 domain	-	-	-	-	-	-	-	-	-	-	-	-	CHASE3,HATPase_c,HisKA,PAS,PAS_9,Response_reg
BYD3_k127_4600834_0	1121904.ARBP01000002_gene6731	2.104e-218	724.0	COG0642@1|root,COG0745@1|root,COG3292@1|root,COG0745@2|Bacteria,COG2205@2|Bacteria,COG3292@2|Bacteria,4NDXU@976|Bacteroidetes,47JBS@768503|Cytophagia	976|Bacteroidetes	T	Two component regulator propeller	-	-	-	-	-	-	-	-	-	-	-	-	HATPase_c,HTH_18,HisKA,Reg_prop,Response_reg,Y_Y_Y
BYD3_k127_4601975_1	980584.AFPB01000147_gene1269	8.839e-71	254.0	COG3299@1|root,COG3299@2|Bacteria,4NF69@976|Bacteroidetes,1HYP7@117743|Flavobacteriia	976|Bacteroidetes	S	homolog of phage Mu protein gp47	-	-	-	-	-	-	-	-	-	-	-	-	Baseplate_J
BYD3_k127_4601975_3	620914.JH621246_gene2760	1.693e-49	180.0	COG3628@1|root,COG3628@2|Bacteria,4NSKN@976|Bacteroidetes,1I48Y@117743|Flavobacteriia,2YJZ4@290174|Aquimarina	976|Bacteroidetes	S	Gene 25-like lysozyme	-	-	-	ko:K06903	-	-	-	-	ko00000	-	-	-	GPW_gp25
BYD3_k127_4601975_4	498211.CJA_3676	3.451e-44	162.0	COG4104@1|root,COG4104@2|Bacteria,1N0ZK@1224|Proteobacteria,1S9FK@1236|Gammaproteobacteria,1FID5@10|Cellvibrio	1236|Gammaproteobacteria	S	PAAR motif	-	-	-	-	-	-	-	-	-	-	-	-	PAAR_motif
BYD3_k127_4601975_0	1123277.KB893195_gene5564	1.315e-215	684.0	COG3501@1|root,COG3501@2|Bacteria,4NFPB@976|Bacteroidetes,47M45@768503|Cytophagia	976|Bacteroidetes	S	TIGRFAM Rhs element Vgr protein	-	-	-	-	-	-	-	-	-	-	-	-	Phage_GPD
BYD3_k127_4601975_2	1123277.KB893195_gene5563	1.966e-67	237.0	COG1652@1|root,COG1652@2|Bacteria,4NJV3@976|Bacteroidetes,47R3Z@768503|Cytophagia	976|Bacteroidetes	S	LysM domain	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_4610190_2	761193.Runsl_2102	5.274e-26	114.0	arCOG14808@1|root,308PC@2|Bacteria,4NR4D@976|Bacteroidetes,47PEP@768503|Cytophagia	976|Bacteroidetes	S	Domain of unknown function (DUF4956)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4956
BYD3_k127_4610190_0	1123057.P872_07695	5.043e-113	376.0	28M5H@1|root,2ZAJ9@2|Bacteria,4NESS@976|Bacteroidetes,47NNA@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_4610190_1	382464.ABSI01000011_gene2578	2.04e-36	153.0	COG0457@1|root,COG5616@1|root,COG0457@2|Bacteria,COG5616@2|Bacteria	2|Bacteria	S	cAMP biosynthetic process	-	-	-	-	-	-	-	-	-	-	-	-	BTAD,TPR_11,TPR_16,TPR_7,TPR_8,Trans_reg_C
BYD3_k127_4610560_1	1089547.KB913013_gene4337	6.012e-218	682.0	COG2271@1|root,COG2271@2|Bacteria,4NGCR@976|Bacteroidetes,47KGE@768503|Cytophagia	976|Bacteroidetes	G	Major Facilitator Superfamily	-	-	-	ko:K08194	-	-	-	-	ko00000,ko02000	2.A.1.14.7	-	-	MFS_1
BYD3_k127_4610560_3	1185876.BN8_03975	1.083e-124	403.0	COG1028@1|root,COG1028@2|Bacteria,4NFDX@976|Bacteroidetes,47NTC@768503|Cytophagia	976|Bacteroidetes	IQ	KR domain	-	-	1.1.1.69	ko:K00046	-	-	-	-	ko00000,ko01000	-	-	-	adh_short_C2
BYD3_k127_4610560_2	1185876.BN8_03976	9.555e-158	505.0	COG1082@1|root,COG1082@2|Bacteria,4NIDT@976|Bacteroidetes,47JR4@768503|Cytophagia	976|Bacteroidetes	G	Xylose isomerase-like TIM barrel	-	-	-	-	-	-	-	-	-	-	-	-	AP_endonuc_2
BYD3_k127_4610560_0	504472.Slin_3985	3.19e-228	719.0	COG2010@1|root,COG2133@1|root,COG2010@2|Bacteria,COG2133@2|Bacteria,4NEZ5@976|Bacteroidetes,47JIJ@768503|Cytophagia	976|Bacteroidetes	C	Membrane-bound dehydrogenase domain protein	-	-	-	-	-	-	-	-	-	-	-	-	Cytochrome_CBB3
BYD3_k127_4612289_8	1237149.C900_03123	3.619e-134	435.0	COG0760@1|root,COG0760@2|Bacteria,4NEW0@976|Bacteroidetes,47JPW@768503|Cytophagia	976|Bacteroidetes	O	peptidyl-prolyl isomerase	surA	-	5.2.1.8	ko:K03771	-	-	-	-	ko00000,ko01000,ko03110	-	-	-	Rotamase,SurA_N_3
BYD3_k127_4612289_4	1237149.C900_03122	2.347e-158	504.0	COG0714@1|root,COG0714@2|Bacteria,4NDVZ@976|Bacteroidetes,47KTK@768503|Cytophagia	976|Bacteroidetes	S	PFAM ATPase associated with various cellular activities	moxR	-	-	ko:K03924	-	-	-	-	ko00000,ko01000	-	-	-	AAA_3
BYD3_k127_4612289_2	929562.Emtol_0361	2.233e-189	602.0	COG1473@1|root,COG1473@2|Bacteria,4NEKH@976|Bacteroidetes,47N92@768503|Cytophagia	976|Bacteroidetes	S	Peptidase dimerisation domain	-	-	-	ko:K12941	-	-	-	-	ko00000,ko01002	-	-	-	M20_dimer,Peptidase_M20
BYD3_k127_4612289_0	1237149.C900_02790	0.0	1176.0	COG1138@1|root,COG1138@2|Bacteria,4NGXI@976|Bacteroidetes,47M2N@768503|Cytophagia	976|Bacteroidetes	O	PFAM Cytochrome c assembly protein	ccmF	-	-	ko:K02198	-	-	-	-	ko00000,ko02000	9.B.14.1	-	-	CcmF_C,Cytochrom_C_asm
BYD3_k127_4612289_17	1237149.C900_02791	3.17e-48	176.0	COG2332@1|root,COG2332@2|Bacteria,4NN85@976|Bacteroidetes,47PIE@768503|Cytophagia	976|Bacteroidetes	O	Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH	-	-	-	ko:K02197	-	-	-	-	ko00000	-	-	-	CcmE
BYD3_k127_4612289_20	509635.N824_17785	1.271e-10	64.0	2BZQ6@1|root,339SI@2|Bacteria,4NXJG@976|Bacteroidetes,1IU7C@117747|Sphingobacteriia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_4612289_10	1237149.C900_02793	2.503e-97	322.0	COG0755@1|root,COG0755@2|Bacteria,4NFUS@976|Bacteroidetes,47MYQ@768503|Cytophagia	976|Bacteroidetes	O	PFAM Cytochrome c assembly protein	ccmC	-	-	ko:K02195	ko02010,map02010	M00259	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.107	-	-	Cytochrom_C_asm
BYD3_k127_4612289_14	866536.Belba_0720	3.48e-69	241.0	COG2386@1|root,COG2386@2|Bacteria,4NFQV@976|Bacteroidetes,47K0P@768503|Cytophagia	976|Bacteroidetes	O	ABC-type transport system involved in cytochrome c biogenesis permease component	ccmB	-	-	ko:K02194	ko02010,map02010	M00259	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.107	-	-	CcmB
BYD3_k127_4612289_19	1237149.C900_02795	6.626e-25	115.0	COG3206@1|root,COG3206@2|Bacteria	2|Bacteria	M	extracellular polysaccharide biosynthetic process	-	-	-	ko:K07011	-	-	-	-	ko00000	-	-	-	AAA_31,Wzz
BYD3_k127_4612289_5	1173022.Cri9333_3498	2.915e-152	487.0	COG0451@1|root,COG0451@2|Bacteria,1G0GJ@1117|Cyanobacteria,1H9Q3@1150|Oscillatoriales	1117|Cyanobacteria	M	NAD dependent epimerase dehydratase family	-	-	5.1.3.6	ko:K08679	ko00520,ko01100,map00520,map01100	-	R01385	RC00289	ko00000,ko00001,ko01000	-	-	-	Epimerase,GDP_Man_Dehyd
BYD3_k127_4612289_1	1237149.C900_02797	1.595e-201	634.0	COG0677@1|root,COG0677@2|Bacteria,4NDTW@976|Bacteroidetes,47JKM@768503|Cytophagia	976|Bacteroidetes	M	Belongs to the UDP-glucose GDP-mannose dehydrogenase family	-	-	1.1.1.136	ko:K02474,ko:K13015	ko00520,map00520	-	R00421,R06894	RC00291	ko00000,ko00001,ko01000,ko01005	-	-	-	UDPG_MGDP_dh,UDPG_MGDP_dh_C,UDPG_MGDP_dh_N
BYD3_k127_4612289_9	1237149.C900_02798	1.144e-127	416.0	COG1087@1|root,COG1087@2|Bacteria,4NEM9@976|Bacteroidetes,47JM5@768503|Cytophagia	976|Bacteroidetes	M	PFAM NAD dependent epimerase dehydratase family	galE	-	5.1.3.2	ko:K01784	ko00052,ko00520,ko01100,map00052,map00520,map01100	M00361,M00362,M00632	R00291,R02984	RC00289	ko00000,ko00001,ko00002,ko01000	-	-	-	Epimerase,GDP_Man_Dehyd
BYD3_k127_4612289_6	1121129.KB903360_gene3628	4.761e-151	486.0	COG0399@1|root,COG0399@2|Bacteria,4NEBI@976|Bacteroidetes,2FPAJ@200643|Bacteroidia,22WTH@171551|Porphyromonadaceae	976|Bacteroidetes	E	Belongs to the DegT DnrJ EryC1 family	degT	-	-	-	-	-	-	-	-	-	-	-	DegT_DnrJ_EryC1
BYD3_k127_4612289_11	709991.Odosp_0959	6.428e-97	320.0	COG0110@1|root,COG0110@2|Bacteria,4NENC@976|Bacteroidetes,2FP5Y@200643|Bacteroidia,22WU1@171551|Porphyromonadaceae	976|Bacteroidetes	S	Bacterial transferase hexapeptide repeat	-	-	2.3.1.201	ko:K13018	ko00520,map00520	-	R10100	RC00004,RC00166	ko00000,ko00001,ko01000,ko01005	-	-	-	Hexapep,Hexapep_2
BYD3_k127_4612289_7	313606.M23134_05641	8.847e-139	446.0	COG0673@1|root,COG0673@2|Bacteria,4PITU@976|Bacteroidetes,47KDG@768503|Cytophagia	976|Bacteroidetes	S	Oxidoreductase family, C-terminal alpha/beta domain	-	-	-	-	-	-	-	-	-	-	-	-	GFO_IDH_MocA,GFO_IDH_MocA_C
BYD3_k127_4612289_12	1408433.JHXV01000017_gene1612	2.683e-94	313.0	COG1209@1|root,COG1209@2|Bacteria,4NE1U@976|Bacteroidetes,1HWWH@117743|Flavobacteriia,2PAM5@246874|Cryomorphaceae	976|Bacteroidetes	H	Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis	rfbA	-	2.7.7.24	ko:K00973	ko00521,ko00523,ko00525,ko01130,map00521,map00523,map00525,map01130	M00793	R02328	RC00002	ko00000,ko00001,ko00002,ko01000	-	-	-	NTP_transferase
BYD3_k127_4612289_15	192952.MM_1166	1.027e-67	237.0	COG1898@1|root,arCOG04188@2157|Archaea,2XVIP@28890|Euryarchaeota,2N9TC@224756|Methanomicrobia	224756|Methanomicrobia	M	Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4- hexulose	-	-	5.1.3.13	ko:K01790	ko00521,ko00523,ko01130,map00521,map00523,map01130	M00793	R06514	RC01531	ko00000,ko00001,ko00002,ko01000	-	-	-	dTDP_sugar_isom
BYD3_k127_4612289_13	1313421.JHBV01000014_gene3881	8.217e-86	292.0	COG1091@1|root,COG1091@2|Bacteria,4NE3K@976|Bacteroidetes,1IP3S@117747|Sphingobacteriia	976|Bacteroidetes	M	Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose	rmlD	-	1.1.1.133	ko:K00067	ko00521,ko00523,ko01130,map00521,map00523,map01130	M00793	R02777	RC00182	ko00000,ko00001,ko00002,ko01000	-	-	-	RmlD_sub_bind
BYD3_k127_4612289_3	1237149.C900_02800	3.293e-177	559.0	COG1088@1|root,COG1088@2|Bacteria,4NE9V@976|Bacteroidetes,47K3S@768503|Cytophagia	976|Bacteroidetes	M	Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily	rfbB	-	4.2.1.46	ko:K01710	ko00521,ko00523,ko00525,ko01055,ko01130,map00521,map00523,map00525,map01055,map01130	M00793	R06513	RC00402	ko00000,ko00001,ko00002,ko01000	-	-	-	GDP_Man_Dehyd
BYD3_k127_4612289_16	1454007.JAUG01000019_gene1127	2.309e-62	217.0	2BWTW@1|root,315N7@2|Bacteria	2|Bacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_4612289_18	1408813.AYMG01000017_gene5479	2.957e-37	146.0	COG4976@1|root,COG4976@2|Bacteria,4PPWT@976|Bacteroidetes,1IZZS@117747|Sphingobacteriia	976|Bacteroidetes	S	Methyltransferase domain	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_4617934_5	1237149.C900_00745	5.301e-76	263.0	COG2982@1|root,COG2982@2|Bacteria,4NEJQ@976|Bacteroidetes,47KBD@768503|Cytophagia	976|Bacteroidetes	M	AsmA-like C-terminal region	-	-	-	-	-	-	-	-	-	-	-	-	AsmA,AsmA_2
BYD3_k127_4617934_0	1121904.ARBP01000006_gene3816	0.0	1046.0	COG1413@1|root,COG2133@1|root,COG1413@2|Bacteria,COG2133@2|Bacteria,4NHVG@976|Bacteroidetes,47M7T@768503|Cytophagia	976|Bacteroidetes	CG	TIGRFAM membrane-bound dehydrogenase domain protein	-	-	-	-	-	-	-	-	-	-	-	-	Cytochrom_C,GSDH,HEAT_2
BYD3_k127_4617934_1	1237149.C900_02057	1.531e-171	544.0	COG0564@1|root,COG0564@2|Bacteria,4NEV3@976|Bacteroidetes,47MPT@768503|Cytophagia	976|Bacteroidetes	J	Responsible for synthesis of pseudouridine from uracil	rluD	-	5.4.99.23	ko:K06180	-	-	-	-	ko00000,ko01000,ko03009	-	-	-	PseudoU_synth_2,S4
BYD3_k127_4617934_7	1279009.ADICEAN_01449	4.804e-11	68.0	COG5649@1|root,COG5649@2|Bacteria	2|Bacteria	E	Domain of unknown function (DU1801)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1801
BYD3_k127_4617934_9	700508.D174_05845	1.003e-05	51.0	COG4338@1|root,COG4338@2|Bacteria,2GQT9@201174|Actinobacteria,23AWR@1762|Mycobacteriaceae	201174|Actinobacteria	S	Protein of unknown function (DUF3253)	-	-	-	-	-	-	-	-	-	-	-	-	DUF2256,DUF3253
BYD3_k127_4617934_4	1237149.C900_01002	1.323e-115	376.0	COG3279@1|root,COG3279@2|Bacteria,4NEAH@976|Bacteroidetes,47KUT@768503|Cytophagia	976|Bacteroidetes	KT	Response regulator of the LytR AlgR family	-	-	-	ko:K02477	-	-	-	-	ko00000,ko02022	-	-	-	LytTR,Response_reg
BYD3_k127_4617934_2	1237149.C900_01001	3.584e-117	389.0	COG2972@1|root,COG2972@2|Bacteria,4NIER@976|Bacteroidetes,47P26@768503|Cytophagia	976|Bacteroidetes	T	Histidine kinase	-	-	-	-	-	-	-	-	-	-	-	-	HATPase_c,His_kinase
BYD3_k127_4617934_3	1237149.C900_01000	4.761e-117	389.0	COG0308@1|root,COG0308@2|Bacteria,4PNPR@976|Bacteroidetes,47YF9@768503|Cytophagia	976|Bacteroidetes	E	CarboxypepD_reg-like domain	-	-	-	-	-	-	-	-	-	-	-	-	CarbopepD_reg_2
BYD3_k127_4617934_6	1123278.KB893481_gene3487	1.462e-56	207.0	COG0642@1|root,COG0745@1|root,COG0745@2|Bacteria,COG2205@2|Bacteria,4NDXU@976|Bacteroidetes,47TVA@768503|Cytophagia	976|Bacteroidetes	T	helix_turn_helix, arabinose operon control protein	-	-	-	-	-	-	-	-	-	-	-	-	HATPase_c,HTH_18,HisKA,Reg_prop,Response_reg,TPR_12,TPR_7,TPR_8,Y_Y_Y
BYD3_k127_4624316_4	1089547.KB913013_gene2878	6.238e-08	55.0	COG0726@1|root,COG0726@2|Bacteria,4NFJP@976|Bacteroidetes,47JTA@768503|Cytophagia	976|Bacteroidetes	G	Glycosyl hydrolase family 9	-	-	3.2.1.4	ko:K01179	ko00500,ko01100,map00500,map01100	-	R06200,R11307,R11308	-	ko00000,ko00001,ko01000	-	GH5,GH9	-	CelD_N,Glyco_hydro_9,Polysacc_deac_1
BYD3_k127_4624316_0	700598.Niako_6563	3.936e-261	816.0	COG0726@1|root,COG0726@2|Bacteria,4NFJP@976|Bacteroidetes,1IQSF@117747|Sphingobacteriia	976|Bacteroidetes	G	polysaccharide deacetylase	-	-	3.2.1.4	ko:K01179	ko00500,ko01100,map00500,map01100	-	R06200,R11307,R11308	-	ko00000,ko00001,ko01000	-	GH5,GH9	-	CelD_N,Glyco_hydro_9,Polysacc_deac_1
BYD3_k127_4624316_1	1150600.ADIARSV_1981	1.265e-156	507.0	COG1086@1|root,COG1086@2|Bacteria,4P26E@976|Bacteroidetes	976|Bacteroidetes	GM	Polysaccharide biosynthesis protein	-	-	-	-	-	-	-	-	-	-	-	-	Polysacc_synt_2
BYD3_k127_4624316_2	641524.ADICYQ_3762	1.872e-29	123.0	COG1310@1|root,COG1310@2|Bacteria,4NTI0@976|Bacteroidetes,47RVG@768503|Cytophagia	976|Bacteroidetes	S	JAB/MPN domain	-	-	3.13.1.6	ko:K21140	ko04122,map04122	-	R11524	RC00064,RC00090	ko00000,ko00001,ko01000	-	-	-	Prok-JAB
BYD3_k127_4624316_3	641524.ADICYQ_3763	2.765e-22	97.0	COG0476@1|root,COG0607@1|root,COG0476@2|Bacteria,COG0607@2|Bacteria,4NFUD@976|Bacteroidetes,47KG8@768503|Cytophagia	976|Bacteroidetes	H	MoeZ MoeB domain	moeZ	-	2.7.7.80,2.8.1.11	ko:K21029,ko:K21147	ko04122,map04122	-	R07459,R07461	RC00043	ko00000,ko00001,ko01000	-	-	-	Rhodanese,ThiF
BYD3_k127_4625350_2	688270.Celal_3761	4.954e-61	240.0	COG5492@1|root,COG5492@2|Bacteria,4NT99@976|Bacteroidetes,1I25B@117743|Flavobacteriia	976|Bacteroidetes	N	Bacterial Ig-like domain 2	-	-	-	-	-	-	-	-	-	-	-	-	Alpha-amylase,Beta_helix,Big_2,CBM26,CBM9_1,DM13,DUF4979,Pectate_lyase_3
BYD3_k127_4625350_3	63737.Npun_F1899	2.853e-39	169.0	COG3420@1|root,COG3420@2|Bacteria,1GK7Z@1117|Cyanobacteria,1HTFU@1161|Nostocales	1117|Cyanobacteria	P	alginic acid biosynthetic process	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_4625350_1	471854.Dfer_1419	3.455e-103	347.0	COG1162@1|root,COG1162@2|Bacteria,4NE24@976|Bacteroidetes,47PF6@768503|Cytophagia	976|Bacteroidetes	S	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit	-	-	3.1.3.100	ko:K06949	ko00730,ko01100,map00730,map01100	-	R00615,R02135	RC00002,RC00017	ko00000,ko00001,ko01000,ko03009	-	-	-	RsgA_GTPase
BYD3_k127_4625350_4	1185876.BN8_00817	3.467e-18	93.0	2E25C@1|root,32XC8@2|Bacteria,4NTJ4@976|Bacteroidetes,47QKP@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_4625350_5	761193.Runsl_3623	1.233e-15	87.0	2E25C@1|root,32XC8@2|Bacteria,4NTJ4@976|Bacteroidetes,47QKP@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_4625350_0	1123508.JH636441_gene3649	1.261e-135	449.0	COG2382@1|root,COG3386@1|root,COG2382@2|Bacteria,COG3386@2|Bacteria,2IY2J@203682|Planctomycetes	203682|Planctomycetes	GP	COG2382 Enterochelin esterase and related enzymes	-	-	-	-	-	-	-	-	-	-	-	-	Esterase,SGL
BYD3_k127_4628475_8	929562.Emtol_3336	5.76e-63	219.0	COG1305@1|root,COG1305@2|Bacteria,4NF4N@976|Bacteroidetes,47N2T@768503|Cytophagia	976|Bacteroidetes	E	Transglutaminase/protease-like homologues	-	-	-	-	-	-	-	-	-	-	-	-	Bact_transglu_N,Transglut_core
BYD3_k127_4628475_1	1237149.C900_03808	4.068e-141	459.0	COG0614@1|root,COG0614@2|Bacteria,4NH9F@976|Bacteroidetes,47MZX@768503|Cytophagia	976|Bacteroidetes	P	PFAM periplasmic binding protein	btuF	-	-	ko:K02016	ko02010,map02010	M00240	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.14	-	-	Peripla_BP_2
BYD3_k127_4628475_3	313606.M23134_02811	5.342e-112	385.0	COG4206@1|root,COG4206@2|Bacteria,4NED9@976|Bacteroidetes,47M0G@768503|Cytophagia	976|Bacteroidetes	H	TonB-dependent Receptor Plug	btuB	-	-	ko:K02014	-	-	-	-	ko00000,ko02000	1.B.14	-	-	Plug,TonB_dep_Rec
BYD3_k127_4628475_6	926549.KI421517_gene1942	7.847e-67	241.0	COG3391@1|root,COG3391@2|Bacteria,4NESV@976|Bacteroidetes,47MV5@768503|Cytophagia	976|Bacteroidetes	S	amine dehydrogenase activity	-	-	-	-	-	-	-	-	-	-	-	-	Glu_cyclase_2
BYD3_k127_4628475_9	1237149.C900_03804	3.519e-14	74.0	2E5CT@1|root,3304V@2|Bacteria,4NUT8@976|Bacteroidetes,47SPY@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_4628475_4	1124780.ANNU01000008_gene2722	6.96e-106	353.0	COG1703@1|root,COG1703@2|Bacteria,4NE7Y@976|Bacteroidetes,47M9T@768503|Cytophagia	976|Bacteroidetes	E	TIGRFAM LAO AO transport system ATPase	argK	-	-	ko:K07588	-	-	-	-	ko00000,ko01000	-	-	-	ArgK
BYD3_k127_4628475_2	1237149.C900_03797	5.859e-119	396.0	COG4252@1|root,COG4252@2|Bacteria,4NMM6@976|Bacteroidetes,47PFU@768503|Cytophagia	976|Bacteroidetes	T	CHASE2 domain	-	-	-	-	-	-	-	-	-	-	-	-	CHASE2
BYD3_k127_4628475_5	1237149.C900_03796	9.904e-76	264.0	2BHR8@1|root,32BUM@2|Bacteria,4NR4P@976|Bacteroidetes,47QNP@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_4628475_7	1237149.C900_03796	1.738e-64	231.0	2BHR8@1|root,32BUM@2|Bacteria,4NR4P@976|Bacteroidetes,47QNP@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_4628475_0	1279009.ADICEAN_02496	7.027e-162	512.0	COG0074@1|root,COG0074@2|Bacteria,4NE6B@976|Bacteroidetes,47K03@768503|Cytophagia	976|Bacteroidetes	C	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit	sucD	-	6.2.1.5	ko:K01902	ko00020,ko00640,ko00660,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00640,map00660,map00720,map01100,map01110,map01120,map01130,map01200	M00009,M00011,M00173,M00374,M00620	R00405,R02404	RC00004,RC00014	ko00000,ko00001,ko00002,ko01000	-	-	-	CoA_binding,Ligase_CoA,Succ_CoA_lig
BYD3_k127_4630667_2	471854.Dfer_5391	8.317e-88	293.0	COG1032@1|root,COG1032@2|Bacteria,4NFPW@976|Bacteroidetes,47N80@768503|Cytophagia	976|Bacteroidetes	C	B12 binding domain	-	-	-	-	-	-	-	-	-	-	-	-	B12-binding,DUF4070,Radical_SAM
BYD3_k127_4630667_1	762903.Pedsa_0397	3.447e-111	375.0	COG4452@1|root,COG4452@2|Bacteria,4NGKY@976|Bacteroidetes,1IPKH@117747|Sphingobacteriia	976|Bacteroidetes	V	Inner membrane protein CreD	creD	-	-	ko:K06143	-	-	-	-	ko00000	-	-	-	CreD
BYD3_k127_4630667_0	1237149.C900_05420	2.113e-223	696.0	COG1012@1|root,COG1012@2|Bacteria,4NFTW@976|Bacteroidetes,47JZ2@768503|Cytophagia	976|Bacteroidetes	C	TIGRFAM delta-1-pyrroline-5-carboxylate dehydrogenase, group 1	pruA	-	1.2.1.88,1.5.5.2	ko:K00294,ko:K13821	ko00250,ko00330,ko01100,ko01110,ko01130,map00250,map00330,map01100,map01110,map01130	-	R00245,R00707,R00708,R01253,R04444,R04445,R05051	RC00080,RC00083,RC00216,RC00242,RC00255	ko00000,ko00001,ko01000,ko03000	-	-	-	Aldedh,Pro_dh
BYD3_k127_4632993_10	509635.N824_09335	9.523e-18	91.0	29GF6@1|root,303CZ@2|Bacteria,4NR6I@976|Bacteroidetes,1IT48@117747|Sphingobacteriia	976|Bacteroidetes	S	Domain of unknown function (DUF4129)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4129
BYD3_k127_4632993_9	1124780.ANNU01000051_gene2078	2.231e-27	123.0	COG1377@1|root,COG1377@2|Bacteria,4NMN3@976|Bacteroidetes,47QAD@768503|Cytophagia	976|Bacteroidetes	NU	Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_4632993_2	1124780.ANNU01000051_gene2079	2.255e-104	347.0	COG1300@1|root,COG1300@2|Bacteria,4NG8D@976|Bacteroidetes,47MPK@768503|Cytophagia	976|Bacteroidetes	S	Stage II sporulation protein M	-	-	-	-	-	-	-	-	-	-	-	-	SpoIIM
BYD3_k127_4632993_0	760192.Halhy_4130	5.99e-169	540.0	COG2355@1|root,COG2355@2|Bacteria,4NEBG@976|Bacteroidetes,1IQAA@117747|Sphingobacteriia	976|Bacteroidetes	E	Membrane dipeptidase (Peptidase family M19)	-	-	3.4.13.19	ko:K01273	-	-	-	-	ko00000,ko00537,ko01000,ko01002,ko04147	-	-	-	Peptidase_M19
BYD3_k127_4632993_6	1124780.ANNU01000051_gene2080	4.652e-53	195.0	COG1714@1|root,COG1714@2|Bacteria,4NH7U@976|Bacteroidetes,47P9X@768503|Cytophagia	976|Bacteroidetes	S	RDD family	-	-	-	-	-	-	-	-	-	-	-	-	RDD
BYD3_k127_4632993_8	929556.Solca_3091	1.431e-35	136.0	COG4892@1|root,COG4892@2|Bacteria,4NSAM@976|Bacteroidetes,1ITM0@117747|Sphingobacteriia	976|Bacteroidetes	S	Cytochrome b5-like Heme Steroid binding domain	-	-	-	-	-	-	-	-	-	-	-	-	Cyt-b5
BYD3_k127_4632993_4	1237149.C900_01166	3.712e-93	313.0	COG2971@1|root,COG2971@2|Bacteria,4NEV4@976|Bacteroidetes,47MGQ@768503|Cytophagia	976|Bacteroidetes	G	N-acetylglucosamine kinase	-	-	-	-	-	-	-	-	-	-	-	-	BcrAD_BadFG
BYD3_k127_4632993_1	929562.Emtol_1598	2.419e-123	400.0	COG2103@1|root,COG2103@2|Bacteria,4NEPY@976|Bacteroidetes,47K6T@768503|Cytophagia	976|Bacteroidetes	G	Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate	murQ	-	4.2.1.126	ko:K07106	ko00520,ko01100,map00520,map01100	-	R08555	RC00397,RC00746	ko00000,ko00001,ko01000	-	-	-	SIS
BYD3_k127_4632993_3	1237149.C900_01164	8.651e-97	319.0	28M4Q@1|root,2ZAIK@2|Bacteria,4NJC3@976|Bacteroidetes,47P7F@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_4632993_7	1120968.AUBX01000011_gene3131	4.86e-52	191.0	COG3091@1|root,COG3091@2|Bacteria,4NDXX@976|Bacteroidetes,47QAA@768503|Cytophagia	976|Bacteroidetes	S	PFAM SprT-like family	sprT	-	-	-	-	-	-	-	-	-	-	-	SprT-like
BYD3_k127_4632993_5	313606.M23134_03383	2.094e-68	235.0	COG1160@1|root,COG1160@2|Bacteria,4NE2J@976|Bacteroidetes,47K6M@768503|Cytophagia	976|Bacteroidetes	S	GTPase that plays an essential role in the late steps of ribosome biogenesis	der	-	-	ko:K03977	-	-	-	-	ko00000,ko03009	-	-	-	KH_dom-like,MMR_HSR1
BYD3_k127_4633438_1	1123278.KB893545_gene4805	1.028e-212	667.0	COG1397@1|root,COG1397@2|Bacteria,4NG36@976|Bacteroidetes,47K8Y@768503|Cytophagia	976|Bacteroidetes	O	ADP-ribosylglycohydrolase	-	-	-	-	-	-	-	-	-	-	-	-	ADP_ribosyl_GH
BYD3_k127_4633438_3	926549.KI421517_gene3590	1.149e-109	362.0	COG0524@1|root,COG0524@2|Bacteria,4NENQ@976|Bacteroidetes,47MN5@768503|Cytophagia	976|Bacteroidetes	H	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway	rbsK	-	2.7.1.15	ko:K00852	ko00030,map00030	-	R01051,R02750	RC00002,RC00017	ko00000,ko00001,ko01000	-	-	-	PfkB
BYD3_k127_4633438_6	926556.Echvi_0938	2.884e-51	188.0	COG2318@1|root,COG2318@2|Bacteria,4NQEI@976|Bacteroidetes	976|Bacteroidetes	S	Protein of unknown function (DUF1572)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1572
BYD3_k127_4633438_0	643867.Ftrac_2276	1.972e-216	680.0	COG0277@1|root,COG0277@2|Bacteria,4NEK3@976|Bacteroidetes,47JNC@768503|Cytophagia	976|Bacteroidetes	C	FAD linked oxidases, C-terminal domain	glcD	-	1.1.2.4,1.1.3.15	ko:K00102,ko:K00104	ko00620,ko00630,ko01100,ko01110,ko01120,ko01130,map00620,map00630,map01100,map01110,map01120,map01130	-	R00197,R00475	RC00042,RC00044	ko00000,ko00001,ko01000	-	-	-	FAD-oxidase_C,FAD_binding_4
BYD3_k127_4633438_7	643867.Ftrac_2275	2.059e-48	179.0	COG0791@1|root,COG0791@2|Bacteria,4NSZJ@976|Bacteroidetes,47PEH@768503|Cytophagia	976|Bacteroidetes	M	Cell wall-associated hydrolase (invasion-associated protein)	spr	-	-	ko:K13695	-	-	-	-	ko00000,ko01002	-	-	-	LysM,NLPC_P60
BYD3_k127_4633438_2	1111730.ATTM01000001_gene1477	2.225e-143	462.0	COG1446@1|root,COG1446@2|Bacteria,4NE3D@976|Bacteroidetes,1HXFB@117743|Flavobacteriia,2NTK7@237|Flavobacterium	976|Bacteroidetes	E	Asparaginase	aspG	GO:0005575,GO:0005623,GO:0042597,GO:0044464	3.4.19.5,3.5.1.26	ko:K01444,ko:K13051	ko00511,ko04142,map00511,map04142	-	-	-	ko00000,ko00001,ko01000,ko01002	-	-	-	Asparaginase_2
BYD3_k127_4633438_4	929556.Solca_3961	8.869e-66	233.0	COG3142@1|root,COG3142@2|Bacteria,4NINY@976|Bacteroidetes,1IRTX@117747|Sphingobacteriia	976|Bacteroidetes	P	Participates in the control of copper homeostasis	cutC	-	-	ko:K06201	-	-	-	-	ko00000	-	-	-	CutC
BYD3_k127_4633438_8	1305737.JAFX01000001_gene1264	2.171e-15	87.0	COG1228@1|root,COG1228@2|Bacteria,4NHGA@976|Bacteroidetes,47N43@768503|Cytophagia	976|Bacteroidetes	Q	Amidohydrolase family	-	-	-	-	-	-	-	-	-	-	-	-	Amidohydro_1
BYD3_k127_4633438_5	1356852.N008_00765	2.521e-55	205.0	COG4206@1|root,COG4206@2|Bacteria,4PKNV@976|Bacteroidetes,47XXQ@768503|Cytophagia	976|Bacteroidetes	H	Outer membrane protein beta-barrel family	-	-	-	-	-	-	-	-	-	-	-	-	CarbopepD_reg_2,CarboxypepD_reg,OMP_b-brl_3,Plug
BYD3_k127_4633740_0	261292.Nit79A3_0026	7.839e-225	707.0	COG3459@1|root,COG3459@2|Bacteria,1MVNX@1224|Proteobacteria,2VKDG@28216|Betaproteobacteria,371PE@32003|Nitrosomonadales	28216|Betaproteobacteria	G	Glycosyl hydrolase 36 superfamily, catalytic domain	-	-	-	-	-	-	-	-	-	-	-	-	Glyco_hydro_36,Glyco_transf_36,Glycoamylase
BYD3_k127_4633740_6	1120966.AUBU01000003_gene1440	1.651e-74	255.0	COG0652@1|root,COG0652@2|Bacteria,4NKQ7@976|Bacteroidetes,47P72@768503|Cytophagia	976|Bacteroidetes	O	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides	ppiB	-	5.2.1.8	ko:K03767,ko:K03768	ko01503,ko04217,map01503,map04217	-	-	-	ko00000,ko00001,ko01000,ko03110,ko04147	-	-	-	Pro_isomerase
BYD3_k127_4633740_8	1270196.JCKI01000009_gene3388	5.212e-14	79.0	COG3637@1|root,COG3637@2|Bacteria,4NV08@976|Bacteroidetes,1ITUR@117747|Sphingobacteriia	976|Bacteroidetes	M	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety	-	-	-	-	-	-	-	-	-	-	-	-	OMP_b-brl
BYD3_k127_4633740_4	1237149.C900_02172	9.815e-91	316.0	COG0642@1|root,COG2205@2|Bacteria,4NG0Y@976|Bacteroidetes,47JUV@768503|Cytophagia	976|Bacteroidetes	T	Histidine kinase	-	-	-	-	-	-	-	-	-	-	-	-	HATPase_c,HisKA,PAS,PAS_9,Response_reg
BYD3_k127_4633740_3	1237149.C900_02173	3.559e-165	526.0	COG0664@1|root,COG0745@1|root,COG0664@2|Bacteria,COG0745@2|Bacteria,4NFB1@976|Bacteroidetes,47JY7@768503|Cytophagia	976|Bacteroidetes	K	Transcriptional regulator, Crp Fnr family	crp	-	-	-	-	-	-	-	-	-	-	-	HTH_Crp_2,Response_reg,cNMP_binding
BYD3_k127_4633740_2	1237149.C900_02438	2.708e-170	547.0	COG2148@1|root,COG2148@2|Bacteria,4NER4@976|Bacteroidetes,47N5W@768503|Cytophagia	976|Bacteroidetes	M	sugar transferase	wcaJ_2	-	2.7.8.6	ko:K00996,ko:K03606	ko05111,map05111	-	-	-	ko00000,ko00001,ko01000,ko01005	-	-	-	Bac_transf,CoA_binding_3
BYD3_k127_4633740_5	1121904.ARBP01000006_gene3886	6.941e-86	291.0	COG1922@1|root,COG1922@2|Bacteria,4NJGT@976|Bacteroidetes,47NEK@768503|Cytophagia	976|Bacteroidetes	M	Belongs to the glycosyltransferase 26 family	-	-	2.4.1.187	ko:K05946	ko05111,map05111	-	-	-	ko00000,ko00001,ko01000,ko01003	-	GT26	-	Glyco_tran_WecB
BYD3_k127_4633740_1	1237149.C900_01349	1.509e-181	575.0	COG0579@1|root,COG0579@2|Bacteria,4NE0B@976|Bacteroidetes,47JS1@768503|Cytophagia	976|Bacteroidetes	S	PFAM FAD dependent oxidoreductase	lhgO	-	-	ko:K15736	-	-	-	-	ko00000,ko01000	-	-	-	DAO
BYD3_k127_4633740_7	373994.Riv7116_4243	2.018e-18	85.0	COG4091@1|root,COG4091@2|Bacteria,1G1RV@1117|Cyanobacteria,1HIT5@1161|Nostocales	1117|Cyanobacteria	E	PFAM SAF domain	-	-	-	-	-	-	-	-	-	-	-	-	GFO_IDH_MocA,NAD_binding_3,SAF
BYD3_k127_4643316_7	1237149.C900_02900	4.866e-44	162.0	COG0446@1|root,COG0446@2|Bacteria,4NET1@976|Bacteroidetes,47JW2@768503|Cytophagia	976|Bacteroidetes	S	Pyridine nucleotide-disulphide oxidoreductase	-	-	-	-	-	-	-	-	-	-	-	-	Pyr_redox_2
BYD3_k127_4643316_0	1121904.ARBP01000006_gene3716	2.606e-236	744.0	COG0348@1|root,COG0348@2|Bacteria,4NHSX@976|Bacteroidetes,47KC5@768503|Cytophagia	976|Bacteroidetes	C	4Fe-4S dicluster domain	yccM_2	-	-	-	-	-	-	-	-	-	-	-	Fer4,Fer4_5,Fer4_7,Fer4_9
BYD3_k127_4643316_2	1237149.C900_04733	3.526e-101	333.0	COG1215@1|root,COG1215@2|Bacteria,4NFM1@976|Bacteroidetes,47M1F@768503|Cytophagia	976|Bacteroidetes	M	PFAM Glycosyl transferase family 2	-	-	-	-	-	-	-	-	-	-	-	-	Glycos_transf_2
BYD3_k127_4643316_1	1237149.C900_04734	5.807e-194	616.0	COG1215@1|root,COG1215@2|Bacteria,4NEK9@976|Bacteroidetes,47MJK@768503|Cytophagia	976|Bacteroidetes	M	glycosyl transferase family 2	-	-	-	-	-	-	-	-	-	-	-	-	Glyco_tranf_2_3,Glycos_transf_2
BYD3_k127_4643316_3	1121904.ARBP01000009_gene4288	1.671e-94	325.0	COG1216@1|root,COG1216@2|Bacteria,4PKUG@976|Bacteroidetes,47YDT@768503|Cytophagia	976|Bacteroidetes	S	Glycosyl transferase, family 2	-	-	-	-	-	-	-	-	-	-	-	-	GT87
BYD3_k127_4643316_6	643867.Ftrac_3363	8.685e-54	193.0	COG0607@1|root,COG0607@2|Bacteria,4NQ61@976|Bacteroidetes,47Q3A@768503|Cytophagia	976|Bacteroidetes	P	Rhodanese Homology Domain	-	-	-	-	-	-	-	-	-	-	-	-	Rhodanese
BYD3_k127_4643316_5	313606.M23134_00961	2.492e-60	214.0	COG3222@1|root,COG3222@2|Bacteria,4NM7F@976|Bacteroidetes,47PF2@768503|Cytophagia	976|Bacteroidetes	S	protein conserved in bacteria	-	-	-	ko:K09931	-	-	-	-	ko00000	-	-	-	DUF2064
BYD3_k127_4643316_4	1123057.P872_07685	1.498e-91	312.0	28M5H@1|root,2ZAJ9@2|Bacteria,4NESS@976|Bacteroidetes,47TNT@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_4643316_8	1089547.KB913013_gene4019	1.888e-21	97.0	arCOG14808@1|root,308PC@2|Bacteria,4NR4D@976|Bacteroidetes,47PEP@768503|Cytophagia	976|Bacteroidetes	S	Domain of unknown function (DUF4956)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4956
BYD3_k127_4676843_5	755732.Fluta_2924	8.889e-14	72.0	COG0518@1|root,COG0519@1|root,COG0518@2|Bacteria,COG0519@2|Bacteria,4NESX@976|Bacteroidetes,1HX9A@117743|Flavobacteriia,2PAFZ@246874|Cryomorphaceae	976|Bacteroidetes	F	Catalyzes the synthesis of GMP from XMP	guaA	GO:0003674,GO:0003824,GO:0003921,GO:0003922,GO:0006139,GO:0006163,GO:0006164,GO:0006177,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009163,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0016884,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034404,GO:0034641,GO:0034654,GO:0042278,GO:0042451,GO:0042455,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046037,GO:0046128,GO:0046129,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901068,GO:1901070,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659	6.3.5.2	ko:K01951	ko00230,ko00983,ko01100,map00230,map00983,map01100	M00050	R01230,R01231,R08244	RC00010,RC00204	ko00000,ko00001,ko00002,ko01000,ko01002	-	-	-	GATase,GMP_synt_C,NAD_synthase
BYD3_k127_4676843_4	657309.BXY_17350	7.622e-18	91.0	COG3047@1|root,COG3047@2|Bacteria,4NP9X@976|Bacteroidetes,2FMHB@200643|Bacteroidia,4AKNK@815|Bacteroidaceae	976|Bacteroidetes	M	COG NOG27406 non supervised orthologous group	-	-	-	-	-	-	-	-	-	-	-	-	OMP_b-brl
BYD3_k127_4676843_3	1235803.C825_00138	2.39e-22	105.0	28N4A@1|root,2ZB9T@2|Bacteria,4NS50@976|Bacteroidetes,2G36J@200643|Bacteroidia,23208@171551|Porphyromonadaceae	976|Bacteroidetes	S	Domain of unknown function (DUF4136)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4136
BYD3_k127_4676843_0	1237149.C900_00280	1.97e-105	350.0	COG1575@1|root,COG1575@2|Bacteria,4NGCJ@976|Bacteroidetes,47JDA@768503|Cytophagia	976|Bacteroidetes	H	Belongs to the MenA family. Type 1 subfamily	menA	-	2.5.1.74	ko:K02548	ko00130,ko01100,ko01110,map00130,map01100,map01110	M00116	R05617,R06858,R10757	RC02935,RC02936,RC03264	ko00000,ko00001,ko00002,ko01000,ko01006	-	-	-	UbiA
BYD3_k127_4676843_2	1185876.BN8_04943	4.814e-32	130.0	COG0782@1|root,COG0782@2|Bacteria,4NQAD@976|Bacteroidetes,47QDF@768503|Cytophagia	976|Bacteroidetes	K	Transcription elongation factor	-	-	-	-	-	-	-	-	-	-	-	-	GreA_GreB
BYD3_k127_4676843_1	1279009.ADICEAN_00104	4.092e-51	183.0	COG0386@1|root,COG0386@2|Bacteria,4NM6G@976|Bacteroidetes,47P7U@768503|Cytophagia	976|Bacteroidetes	O	Belongs to the glutathione peroxidase family	gpx1	-	1.11.1.9	ko:K00432	ko00480,ko00590,ko04918,map00480,map00590,map04918	-	R00274,R07034,R07035	RC00011,RC00982	ko00000,ko00001,ko01000	-	-	-	GSHPx
BYD3_k127_4683583_5	1250006.JHZZ01000001_gene1185	1.016e-29	119.0	COG0346@1|root,COG0346@2|Bacteria,4NRRB@976|Bacteroidetes,1I2PP@117743|Flavobacteriia	976|Bacteroidetes	E	glyoxalase	-	-	-	-	-	-	-	-	-	-	-	-	Glyoxalase
BYD3_k127_4683583_1	700598.Niako_1860	2.546e-112	367.0	COG0745@1|root,COG0745@2|Bacteria,4NIQC@976|Bacteroidetes,1IX1N@117747|Sphingobacteriia	976|Bacteroidetes	T	Transcriptional regulatory protein, C terminal	-	-	-	ko:K07667	ko02020,ko02024,map02020,map02024	M00454	-	-	ko00000,ko00001,ko00002,ko02022	-	-	-	Response_reg,Trans_reg_C
BYD3_k127_4683583_0	700598.Niako_1861	6.524e-214	676.0	COG0642@1|root,COG2770@1|root,COG2205@2|Bacteria,COG2770@2|Bacteria,4NGAS@976|Bacteroidetes,1IUW2@117747|Sphingobacteriia	976|Bacteroidetes	T	HAMP domain	-	-	-	-	-	-	-	-	-	-	-	-	HAMP,HATPase_c,HisKA,TPR_8
BYD3_k127_4683583_2	406552.NJ7G_2116	4.374e-96	323.0	COG1653@1|root,arCOG00151@2157|Archaea,2Y2AY@28890|Euryarchaeota,23Z4Y@183963|Halobacteria	183963|Halobacteria	G	COG1653 ABC-type sugar transport system, periplasmic component	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_4683583_6	1122176.KB903561_gene3589	3.315e-20	96.0	COG2010@1|root,COG2010@2|Bacteria,4PEWN@976|Bacteroidetes,1IXW6@117747|Sphingobacteriia	976|Bacteroidetes	C	Cytochrome c	-	-	-	-	-	-	-	-	-	-	-	-	PSCyt1
BYD3_k127_4683583_3	153721.MYP_2893	3.512e-39	152.0	COG2353@1|root,COG2353@2|Bacteria,4NSJH@976|Bacteroidetes,47QHY@768503|Cytophagia	976|Bacteroidetes	S	Belongs to the UPF0312 family	-	-	-	-	-	-	-	-	-	-	-	-	YceI
BYD3_k127_4683583_4	471854.Dfer_4137	9.271e-39	149.0	COG3637@1|root,COG3637@2|Bacteria,4NE33@976|Bacteroidetes,47NZ9@768503|Cytophagia	976|Bacteroidetes	M	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_4687761_0	1150599.MPHLEI_02793	1.756e-106	364.0	COG3209@1|root,COG3209@2|Bacteria,2I60K@201174|Actinobacteria,2375A@1762|Mycobacteriaceae	201174|Actinobacteria	M	Protein conserved in bacteria	-	-	-	-	-	-	-	-	-	-	-	-	Cadherin_3,RCC1_2
BYD3_k127_4687761_2	452637.Oter_1824	4.311e-38	161.0	COG0823@1|root,COG0823@2|Bacteria	2|Bacteria	U	Involved in the tonB-independent uptake of proteins	-	-	-	-	-	-	-	-	-	-	-	-	OmpA,PD40
BYD3_k127_4687761_5	1120951.AUBG01000002_gene1244	8.828e-07	58.0	2BTQM@1|root,32NXS@2|Bacteria,4PFK3@976|Bacteroidetes,1I7AQ@117743|Flavobacteriia	976|Bacteroidetes	S	TIR domain	-	-	-	-	-	-	-	-	-	-	-	-	TIR_2
BYD3_k127_4687761_4	1121875.KB907553_gene24	8.966e-10	61.0	COG0412@1|root,COG1262@1|root,COG2114@1|root,COG0412@2|Bacteria,COG1262@2|Bacteria,COG2114@2|Bacteria,4PPKM@976|Bacteroidetes	976|Bacteroidetes	T	Adenylyl- / guanylyl cyclase, catalytic domain	-	-	-	-	-	-	-	-	-	-	-	-	Guanylate_cyc
BYD3_k127_4687761_3	1121875.KB907553_gene24	2.211e-27	113.0	COG0412@1|root,COG1262@1|root,COG2114@1|root,COG0412@2|Bacteria,COG1262@2|Bacteria,COG2114@2|Bacteria,4PPKM@976|Bacteroidetes	976|Bacteroidetes	T	Adenylyl- / guanylyl cyclase, catalytic domain	-	-	-	-	-	-	-	-	-	-	-	-	Guanylate_cyc
BYD3_k127_4687761_1	1380391.JIAS01000012_gene4124	1.084e-46	183.0	COG2114@1|root,COG2114@2|Bacteria,1ND4Q@1224|Proteobacteria,2U51W@28211|Alphaproteobacteria,2JXWG@204441|Rhodospirillales	204441|Rhodospirillales	T	Protein of unknown function (DUF2652)	-	-	-	-	-	-	-	-	-	-	-	-	DUF2652
BYD3_k127_4702538_4	926549.KI421517_gene716	4.061e-115	376.0	COG0673@1|root,COG0673@2|Bacteria,4NEQB@976|Bacteroidetes,47KWZ@768503|Cytophagia	976|Bacteroidetes	S	Oxidoreductase family, NAD-binding Rossmann fold	yvaA	-	1.1.1.371	ko:K16044	ko00562,ko01120,map00562,map01120	-	R09954	RC00182	ko00000,ko00001,ko01000	-	-	-	GFO_IDH_MocA,GFO_IDH_MocA_C
BYD3_k127_4702538_2	1121904.ARBP01000001_gene5967	6.048e-174	550.0	COG0524@1|root,COG0524@2|Bacteria,4NFH8@976|Bacteroidetes,47KKJ@768503|Cytophagia	976|Bacteroidetes	G	PFAM PfkB	-	-	2.7.1.45	ko:K00874	ko00030,ko01100,ko01120,ko01200,map00030,map01100,map01120,map01200	M00061,M00308,M00631	R01541	RC00002,RC00017	ko00000,ko00001,ko00002,ko01000	-	-	-	PfkB
BYD3_k127_4702538_7	926556.Echvi_3630	1.909e-78	267.0	COG0800@1|root,COG0800@2|Bacteria,4NEFY@976|Bacteroidetes,47PM4@768503|Cytophagia	976|Bacteroidetes	G	PFAM KDPG and KHG aldolase	eda	-	4.1.2.14,4.1.3.42	ko:K01625	ko00030,ko00630,ko01100,ko01120,ko01200,map00030,map00630,map01100,map01120,map01200	M00008,M00061,M00308,M00631	R00470,R05605	RC00307,RC00308,RC00435	ko00000,ko00001,ko00002,ko01000	-	-	-	Aldolase
BYD3_k127_4702538_8	926556.Echvi_3630	4.142e-64	226.0	COG0800@1|root,COG0800@2|Bacteria,4NEFY@976|Bacteroidetes,47PM4@768503|Cytophagia	976|Bacteroidetes	G	PFAM KDPG and KHG aldolase	eda	-	4.1.2.14,4.1.3.42	ko:K01625	ko00030,ko00630,ko01100,ko01120,ko01200,map00030,map00630,map01100,map01120,map01200	M00008,M00061,M00308,M00631	R00470,R05605	RC00307,RC00308,RC00435	ko00000,ko00001,ko00002,ko01000	-	-	-	Aldolase
BYD3_k127_4702538_0	1089547.KB913013_gene4153	1.162e-206	649.0	COG2271@1|root,COG2271@2|Bacteria,4NE7R@976|Bacteroidetes,47JBJ@768503|Cytophagia	976|Bacteroidetes	G	PFAM Major Facilitator Superfamily	-	-	-	ko:K08191	-	-	-	-	ko00000,ko02000	2.A.1.14.2	-	-	MFS_1
BYD3_k127_4702538_10	1168289.AJKI01000001_gene3662	1.375e-36	141.0	COG0347@1|root,COG0347@2|Bacteria,4NQG9@976|Bacteroidetes	976|Bacteroidetes	K	Belongs to the P(II) protein family	-	-	-	ko:K04751	ko02020,map02020	-	-	-	ko00000,ko00001	-	-	-	P-II
BYD3_k127_4702538_1	1168289.AJKI01000001_gene3661	4.445e-196	623.0	COG0004@1|root,COG0004@2|Bacteria,4NDV2@976|Bacteroidetes,2FNEC@200643|Bacteroidia,3XJJF@558415|Marinilabiliaceae	976|Bacteroidetes	P	Ammonium Transporter Family	amt	-	-	ko:K03320	-	-	-	-	ko00000,ko02000	1.A.11	-	-	Ammonium_transp
BYD3_k127_4702538_6	929562.Emtol_1032	1.349e-85	287.0	COG2055@1|root,COG2055@2|Bacteria,4NGVC@976|Bacteroidetes,47MHU@768503|Cytophagia	976|Bacteroidetes	C	Belongs to the LDH2 MDH2 oxidoreductase family	-	-	1.1.1.130	ko:K08092	ko00040,ko00053,map00040,map00053	-	R02637,R02639	RC00238	ko00000,ko00001,ko01000	-	-	-	Ldh_2
BYD3_k127_4702538_9	929562.Emtol_1032	7.365e-42	157.0	COG2055@1|root,COG2055@2|Bacteria,4NGVC@976|Bacteroidetes,47MHU@768503|Cytophagia	976|Bacteroidetes	C	Belongs to the LDH2 MDH2 oxidoreductase family	-	-	1.1.1.130	ko:K08092	ko00040,ko00053,map00040,map00053	-	R02637,R02639	RC00238	ko00000,ko00001,ko01000	-	-	-	Ldh_2
BYD3_k127_4702538_5	485918.Cpin_1435	1.465e-94	319.0	COG2367@1|root,COG2367@2|Bacteria,4NE3C@976|Bacteroidetes,1IPJ9@117747|Sphingobacteriia	976|Bacteroidetes	V	beta-lactamase	per1	-	3.5.2.6	ko:K17836	ko00311,ko01130,ko01501,map00311,map01130,map01501	M00627,M00628	R06363	RC01499	ko00000,ko00001,ko00002,ko01000,ko01504	-	-	-	Beta-lactamase2
BYD3_k127_4702538_3	926549.KI421517_gene2421	9.201e-147	479.0	COG0577@1|root,COG0577@2|Bacteria,4NDUK@976|Bacteroidetes,47MUE@768503|Cytophagia	976|Bacteroidetes	V	MacB-like periplasmic core domain	-	-	-	ko:K02004	-	M00258	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	FtsX,MacB_PCD
BYD3_k127_471256_2	1120966.AUBU01000012_gene129	6.403e-165	523.0	COG0536@1|root,COG0536@2|Bacteria,4NEK4@976|Bacteroidetes,47JCS@768503|Cytophagia	976|Bacteroidetes	S	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control	obg	-	-	ko:K03979	-	-	-	-	ko00000,ko01000,ko03009	-	-	-	GTP1_OBG,MMR_HSR1
BYD3_k127_471256_7	1313301.AUGC01000012_gene1376	4.427e-68	237.0	COG0563@1|root,COG0563@2|Bacteria,4NG7J@976|Bacteroidetes	976|Bacteroidetes	F	Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism	adk	-	2.7.4.3	ko:K00939	ko00230,ko00730,ko01100,ko01110,ko01130,map00230,map00730,map01100,map01110,map01130	M00049	R00127,R01547,R11319	RC00002	ko00000,ko00001,ko00002,ko01000,ko04147	-	-	-	ADK,Pribosyltran
BYD3_k127_471256_8	1237149.C900_03239	9.58e-59	209.0	COG0634@1|root,COG0634@2|Bacteria,4NNIB@976|Bacteroidetes,47PQ9@768503|Cytophagia	976|Bacteroidetes	F	Belongs to the purine pyrimidine phosphoribosyltransferase family	hpt	-	2.4.2.8	ko:K00760	ko00230,ko00983,ko01100,ko01110,map00230,map00983,map01100,map01110	-	R00190,R01132,R01229,R02142,R08237,R08238,R08245	RC00063,RC00122	ko00000,ko00001,ko01000	-	-	-	Pribosyltran
BYD3_k127_471256_5	421072.IO89_06940	6.502e-77	261.0	COG3738@1|root,COG3738@2|Bacteria,4NM46@976|Bacteroidetes,1I1JU@117743|Flavobacteriia,3HHJ7@358033|Chryseobacterium	976|Bacteroidetes	S	Domain of unknown function (DUF1287)	-	-	-	ko:K09974	-	-	-	-	ko00000	-	-	-	DUF1287
BYD3_k127_471256_0	509635.N824_23255	6.436e-208	655.0	COG0673@1|root,COG0673@2|Bacteria,4NF3G@976|Bacteroidetes,1IPU8@117747|Sphingobacteriia	976|Bacteroidetes	S	PFAM Oxidoreductase family, NAD-binding Rossmann fold	-	-	-	-	-	-	-	-	-	-	-	-	GFO_IDH_MocA
BYD3_k127_471256_3	1237149.C900_03238	4.612e-142	456.0	COG1363@1|root,COG1363@2|Bacteria,4NH34@976|Bacteroidetes,47MR1@768503|Cytophagia	976|Bacteroidetes	G	PFAM M42 glutamyl aminopeptidase	-	-	-	-	-	-	-	-	-	-	-	-	Peptidase_M42
BYD3_k127_471256_6	866536.Belba_0480	2.94e-75	258.0	COG0035@1|root,COG0035@2|Bacteria,4NFZM@976|Bacteroidetes,47P6X@768503|Cytophagia	976|Bacteroidetes	F	uracil phosphoribosyltransferase	upp	-	2.4.2.9	ko:K00761	ko00240,ko01100,map00240,map01100	-	R00966	RC00063	ko00000,ko00001,ko01000	-	-	-	UPRTase
BYD3_k127_471256_9	1237149.C900_03235	3.983e-39	150.0	2E5FG@1|root,33075@2|Bacteria,4NWB7@976|Bacteroidetes,47QE3@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_471256_4	1237149.C900_03234	2.02e-140	451.0	COG1760@1|root,COG1760@2|Bacteria,4NENR@976|Bacteroidetes,47JRY@768503|Cytophagia	976|Bacteroidetes	E	PFAM Serine dehydratase alpha chain	-	-	4.3.1.17	ko:K01752	ko00260,ko00270,ko01100,ko01110,ko01130,ko01200,ko01230,map00260,map00270,map01100,map01110,map01130,map01200,map01230	-	R00220,R00590	RC00331,RC02600	ko00000,ko00001,ko01000	-	-	-	SDH_alpha
BYD3_k127_471256_1	1237149.C900_01787	3.068e-175	563.0	COG2234@1|root,COG2234@2|Bacteria,4NE66@976|Bacteroidetes,47MBT@768503|Cytophagia	976|Bacteroidetes	S	Peptidase family M28	-	-	-	-	-	-	-	-	-	-	-	-	PA,Peptidase_M28
BYD3_k127_471256_10	421072.IO89_18265	8.089e-13	80.0	COG1520@1|root,COG1520@2|Bacteria,4NSXT@976|Bacteroidetes,1I7KG@117743|Flavobacteriia,3HIR9@358033|Chryseobacterium	976|Bacteroidetes	S	PFAM Beta-propeller repeat	-	-	-	-	-	-	-	-	-	-	-	-	SBBP
BYD3_k127_4736084_4	1237149.C900_04074	4.779e-17	86.0	COG3093@1|root,COG3093@2|Bacteria,4PC9U@976|Bacteroidetes,47X26@768503|Cytophagia	976|Bacteroidetes	K	Cro/C1-type HTH DNA-binding domain	-	-	-	-	-	-	-	-	-	-	-	-	HTH_26
BYD3_k127_4736084_3	1123276.KB893252_gene3696	5.172e-29	124.0	COG0500@1|root,COG2226@2|Bacteria,4NSPB@976|Bacteroidetes,47RD0@768503|Cytophagia	976|Bacteroidetes	Q	Methyltransferase domain	-	-	-	-	-	-	-	-	-	-	-	-	Methyltransf_12,Methyltransf_2,Methyltransf_25
BYD3_k127_4736084_2	1279009.ADICEAN_02902	3.734e-38	153.0	2DBER@1|root,2Z8TN@2|Bacteria,4NK2P@976|Bacteroidetes,47P45@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_4736084_0	1237149.C900_04606	1.126e-114	376.0	COG0224@1|root,COG0224@2|Bacteria,4NECM@976|Bacteroidetes,47JM0@768503|Cytophagia	976|Bacteroidetes	C	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex	atpG	-	-	ko:K02115	ko00190,ko00195,ko01100,map00190,map00195,map01100	M00157	-	-	ko00000,ko00001,ko00002,ko00194	3.A.2.1	-	-	ATP-synt
BYD3_k127_4736084_1	1237149.C900_04605	1.253e-91	303.0	COG0056@1|root,COG0056@2|Bacteria,4NFZW@976|Bacteroidetes,47JFI@768503|Cytophagia	976|Bacteroidetes	C	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit	atpA	-	3.6.3.14	ko:K02111	ko00190,ko00195,ko01100,map00190,map00195,map01100	M00157	-	-	ko00000,ko00001,ko00002,ko00194,ko01000	3.A.2.1	-	-	ATP-synt_ab,ATP-synt_ab_C,ATP-synt_ab_N
BYD3_k127_4739867_5	700598.Niako_2037	0.000154	49.0	COG0457@1|root,COG2972@1|root,COG0457@2|Bacteria,COG2972@2|Bacteria,4NF45@976|Bacteroidetes,1IXAB@117747|Sphingobacteriia	976|Bacteroidetes	T	Signal transduction histidine kinase, LytS	-	-	-	-	-	-	-	-	-	-	-	-	7TMR-DISMED2,7TMR-DISM_7TM,His_kinase,TPR_10,TPR_12,TPR_7,TPR_8
BYD3_k127_4739867_0	1082933.MEA186_06086	8.433e-118	395.0	COG0457@1|root,COG3710@1|root,COG5616@1|root,COG0457@2|Bacteria,COG3710@2|Bacteria,COG5616@2|Bacteria,1R20U@1224|Proteobacteria,2U3F2@28211|Alphaproteobacteria	28211|Alphaproteobacteria	K	Tetratricopeptide repeat	-	-	-	-	-	-	-	-	-	-	-	-	TPR_16,TPR_19,TPR_6
BYD3_k127_4739867_4	452637.Oter_0125	4.619e-08	60.0	COG2146@1|root,COG4244@1|root,COG2146@2|Bacteria,COG4244@2|Bacteria,46WQG@74201|Verrucomicrobia	74201|Verrucomicrobia	P	Rieske-like [2Fe-2S] domain	-	-	-	ko:K05710	ko00360,ko01120,ko01220,map00360,map01120,map01220	M00545	R06782,R06783	RC00098	br01602,ko00000,ko00001,ko00002	-	-	-	Rieske
BYD3_k127_4739867_3	1237149.C900_04878	1.741e-19	92.0	2ECSH@1|root,336Q2@2|Bacteria	2|Bacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_4739867_2	616991.JPOO01000001_gene4173	5.022e-42	162.0	COG1595@1|root,COG1595@2|Bacteria,4NEHC@976|Bacteroidetes,1HYVK@117743|Flavobacteriia,23GKU@178469|Arenibacter	976|Bacteroidetes	K	Sigma-70, region 4	-	-	-	ko:K03088	-	-	-	-	ko00000,ko03021	-	-	-	Sigma70_r2,Sigma70_r4_2
BYD3_k127_4739867_1	504472.Slin_3640	6.543e-98	338.0	2C34F@1|root,2ZA5Y@2|Bacteria,4NGPA@976|Bacteroidetes,47MYC@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_4739867_6	1229487.AMYW01000012_gene4246	0.0001859	46.0	COG1520@1|root,COG1520@2|Bacteria,4NFA9@976|Bacteroidetes,1I4P5@117743|Flavobacteriia,2NTX4@237|Flavobacterium	976|Bacteroidetes	S	PQQ enzyme repeat	-	-	-	-	-	-	-	-	-	-	-	-	PQQ,PQQ_2,PQQ_3
BYD3_k127_4740062_0	743722.Sph21_4282	2.647e-176	565.0	COG1529@1|root,COG1529@2|Bacteria,4NFFU@976|Bacteroidetes	976|Bacteroidetes	C	COG1529 Aerobic-type carbon monoxide dehydrogenase large subunit CoxL CutL homologs	-	-	1.3.99.16	ko:K07303	-	-	-	-	ko00000,ko01000	-	-	-	Ald_Xan_dh_C,Ald_Xan_dh_C2
BYD3_k127_4740062_1	153721.MYP_2686	3.74e-160	509.0	COG4977@1|root,COG4977@2|Bacteria,4NGSR@976|Bacteroidetes,47NDM@768503|Cytophagia	976|Bacteroidetes	K	DJ-1/PfpI family	-	-	-	-	-	-	-	-	-	-	-	-	DJ-1_PfpI,HTH_18
BYD3_k127_4740062_2	269798.CHU_1733	4.693e-25	107.0	COG3631@1|root,COG3631@2|Bacteria,4NPEK@976|Bacteroidetes	976|Bacteroidetes	S	Ketosteroid isomerase-related protein	-	-	-	-	-	-	-	-	-	-	-	-	SnoaL,SnoaL_2
BYD3_k127_4745032_1	714943.Mucpa_2731	6.368e-163	526.0	COG0124@1|root,COG0124@2|Bacteria,4NE8N@976|Bacteroidetes,1IQNJ@117747|Sphingobacteriia	976|Bacteroidetes	J	histidyl-tRNA synthetase	hisS	-	6.1.1.21	ko:K01892	ko00970,map00970	M00359,M00360	R03655	RC00055,RC00523	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	-	-	-	HGTP_anticodon,tRNA-synt_His
BYD3_k127_4745032_0	1237149.C900_04377	5.392e-220	692.0	COG2986@1|root,COG2986@2|Bacteria,4NE0D@976|Bacteroidetes,47MP5@768503|Cytophagia	976|Bacteroidetes	E	Histidine ammonia-lyase	hutH	-	4.3.1.3	ko:K01745	ko00340,ko01100,map00340,map01100	M00045	R01168	RC00361	ko00000,ko00001,ko00002,ko01000	-	-	-	Lyase_aromatic
BYD3_k127_4745032_2	1237149.C900_04378	2.519e-99	344.0	COG3291@1|root,COG3291@2|Bacteria,4NJW2@976|Bacteroidetes,47K98@768503|Cytophagia	976|Bacteroidetes	S	C-terminal domain of CHU protein family	-	-	-	-	-	-	-	-	-	-	-	-	CHU_C
BYD3_k127_4747839_4	999419.HMPREF1077_02465	0.0005125	49.0	COG3637@1|root,COG3637@2|Bacteria,4NSVH@976|Bacteroidetes,2FS20@200643|Bacteroidia,22YH7@171551|Porphyromonadaceae	976|Bacteroidetes	M	Outer membrane protein beta-barrel domain	-	-	-	-	-	-	-	-	-	-	-	-	OMP_b-brl,OMP_b-brl_2
BYD3_k127_4747839_3	929704.Myrod_3223	0.0003445	51.0	COG3637@1|root,COG3637@2|Bacteria,4NR9K@976|Bacteroidetes,1I34P@117743|Flavobacteriia,47IUJ@76831|Myroides	976|Bacteroidetes	M	Outer membrane protein beta-barrel domain	-	-	-	-	-	-	-	-	-	-	-	-	OMP_b-brl_2
BYD3_k127_4747839_2	643867.Ftrac_3408	2.421e-32	134.0	COG3712@1|root,COG3712@2|Bacteria	2|Bacteria	PT	iron ion homeostasis	-	-	-	-	-	-	-	-	-	-	-	-	DUF4974,FecR
BYD3_k127_4747839_1	1453505.JASY01000024_gene296	1.189e-79	280.0	COG2819@1|root,COG2819@2|Bacteria,4NN8M@976|Bacteroidetes,1I1EI@117743|Flavobacteriia,2P034@237|Flavobacterium	976|Bacteroidetes	S	Putative esterase	-	-	-	ko:K07017	-	-	-	-	ko00000	-	-	-	Esterase
BYD3_k127_4747839_0	1341181.FLJC2902T_15950	7.985e-163	523.0	COG2204@1|root,COG2204@2|Bacteria,4NE89@976|Bacteroidetes,1HWWK@117743|Flavobacteriia,2NT3G@237|Flavobacterium	976|Bacteroidetes	T	Chemotaxis protein CheY	-	-	-	ko:K02481	-	-	-	-	ko00000,ko02022	-	-	-	HTH_8,Response_reg,Sigma54_activat
BYD3_k127_4752130_9	1237149.C900_01723	8.785e-41	153.0	COG2067@1|root,COG2067@2|Bacteria,4NEP1@976|Bacteroidetes,47N37@768503|Cytophagia	976|Bacteroidetes	I	membrane	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_4752130_5	1237149.C900_01724	2.33e-110	371.0	COG0457@1|root,COG0457@2|Bacteria,4NF7U@976|Bacteroidetes,47MJ6@768503|Cytophagia	976|Bacteroidetes	S	Tetratricopeptide repeat protein	-	-	-	-	-	-	-	-	-	-	-	-	TPR_8
BYD3_k127_4752130_8	1237149.C900_01725	3.792e-44	166.0	COG3117@1|root,COG3117@2|Bacteria,4NRIN@976|Bacteroidetes,47R6J@768503|Cytophagia	976|Bacteroidetes	S	Lipopolysaccharide-assembly, LptC-related	-	-	-	-	-	-	-	-	-	-	-	-	LptC
BYD3_k127_4752130_4	1237149.C900_01726	1.25e-116	389.0	COG1253@1|root,COG1253@2|Bacteria,4NG0I@976|Bacteroidetes,47KQX@768503|Cytophagia	976|Bacteroidetes	S	CBS domain	tlyC	-	-	ko:K03699	-	-	-	-	ko00000,ko02042	-	-	-	CBS,CorC_HlyC,DUF21
BYD3_k127_4752130_1	1237149.C900_01727	2.823e-221	707.0	COG0760@1|root,COG0760@2|Bacteria,4NDZZ@976|Bacteroidetes,47KBN@768503|Cytophagia	976|Bacteroidetes	O	peptidylprolyl isomerase	ppiD	-	5.2.1.8	ko:K01802,ko:K03770	-	-	-	-	ko00000,ko01000,ko03110	-	-	-	Rotamase_2,Rotamase_3,SurA_N_2
BYD3_k127_4752130_11	1237149.C900_01728	1.896e-22	100.0	COG2921@1|root,COG2921@2|Bacteria,4P9XR@976|Bacteroidetes,47S9P@768503|Cytophagia	976|Bacteroidetes	S	Protein of unknown function (DUF493)	-	-	-	-	-	-	-	-	-	-	-	-	DUF493
BYD3_k127_4752130_10	1237149.C900_01730	4.259e-28	116.0	COG2154@1|root,COG2154@2|Bacteria,4NS9U@976|Bacteroidetes,47RW0@768503|Cytophagia	976|Bacteroidetes	H	PFAM Pterin 4 alpha carbinolamine dehydratase	phhB	-	4.2.1.96	ko:K01724	ko00790,map00790	-	R04734	RC01208	ko00000,ko00001,ko01000,ko04147	-	-	-	Pterin_4a
BYD3_k127_4752130_7	1237149.C900_02856	3.04e-92	310.0	COG0566@1|root,COG0566@2|Bacteria,4NF6H@976|Bacteroidetes,47JZC@768503|Cytophagia	976|Bacteroidetes	J	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family	trmH	-	2.1.1.185	ko:K03218,ko:K03437	-	-	-	-	ko00000,ko01000,ko03009,ko03016	-	-	-	SpoU_methylase,SpoU_sub_bind
BYD3_k127_4752130_2	1237149.C900_02756	8.872e-178	576.0	COG1629@1|root,COG1629@2|Bacteria,4PM72@976|Bacteroidetes,47Y3N@768503|Cytophagia	976|Bacteroidetes	P	Domain of unknown function (DUF4139)	-	-	-	-	-	-	-	-	-	-	-	-	CarbopepD_reg_2,DUF4139,DUF4140,Plug
BYD3_k127_4752130_3	1123248.KB893386_gene1976	4.749e-138	446.0	COG1052@1|root,COG1052@2|Bacteria,4NF1R@976|Bacteroidetes,1IRC8@117747|Sphingobacteriia	976|Bacteroidetes	CH	D-isomer specific 2-hydroxyacid dehydrogenase	-	-	1.1.1.28	ko:K03778	ko00620,ko01120,map00620,map01120	-	R00704	RC00044	ko00000,ko00001,ko01000	-	-	-	2-Hacid_dh,2-Hacid_dh_C
BYD3_k127_4752130_0	1123277.KB893207_gene384	4.861e-297	921.0	COG0365@1|root,COG0365@2|Bacteria,4NEAD@976|Bacteroidetes,47JMW@768503|Cytophagia	976|Bacteroidetes	I	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA	acsA	-	6.2.1.1	ko:K01895	ko00010,ko00620,ko00640,ko00680,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00620,map00640,map00680,map00720,map01100,map01110,map01120,map01130,map01200	M00357	R00235,R00236,R00316,R00926,R01354	RC00004,RC00012,RC00043,RC00070,RC02746,RC02816	ko00000,ko00001,ko00002,ko01000,ko01004	-	-	-	ACAS_N,AMP-binding,AMP-binding_C
BYD3_k127_4752130_6	1237149.C900_03024	1.664e-98	330.0	COG1216@1|root,COG1216@2|Bacteria,4NGNS@976|Bacteroidetes,47UUA@768503|Cytophagia	976|Bacteroidetes	S	Glycosyltransferase like family 2	-	-	-	ko:K07011	-	-	-	-	ko00000	-	-	-	Glyco_tranf_2_3,Glycos_transf_2
BYD3_k127_4752130_12	1237149.C900_03023	1.923e-17	90.0	COG3307@1|root,COG3307@2|Bacteria,4NUP9@976|Bacteroidetes,47V2J@768503|Cytophagia	976|Bacteroidetes	M	O-antigen ligase like membrane protein	-	-	-	-	-	-	-	-	-	-	-	-	Wzy_C
BYD3_k127_4757833_1	1237149.C900_03460	5.776e-72	247.0	COG1354@1|root,COG1354@2|Bacteria,4NJQE@976|Bacteroidetes,47MUR@768503|Cytophagia	976|Bacteroidetes	D	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves	scpA	-	-	ko:K05896	-	-	-	-	ko00000,ko03036	-	-	-	SMC_ScpA
BYD3_k127_4757833_2	1047013.AQSP01000104_gene1411	3.494e-71	258.0	COG5000@1|root,COG5000@2|Bacteria	2|Bacteria	T	phosphorelay sensor kinase activity	-	-	-	-	-	-	-	-	-	-	-	-	HATPase_c,PAS_8
BYD3_k127_4757833_0	1237149.C900_00082	9.121e-163	524.0	COG2204@1|root,COG2204@2|Bacteria,4NE89@976|Bacteroidetes,47JF9@768503|Cytophagia	976|Bacteroidetes	T	two component, sigma54 specific, transcriptional regulator, Fis family	-	-	-	-	-	-	-	-	-	-	-	-	HTH_8,Response_reg,Sigma54_activat
BYD3_k127_4757833_3	880526.KE386488_gene1574	2.917e-09	60.0	COG0577@1|root,COG0577@2|Bacteria,4NDUK@976|Bacteroidetes,2FN9Q@200643|Bacteroidia	976|Bacteroidetes	V	Efflux ABC transporter, permease protein	-	-	-	ko:K02004	-	M00258	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	FtsX,MacB_PCD
BYD3_k127_4778880_0	1123248.KB893359_gene2201	6.434e-215	678.0	COG0459@1|root,COG0459@2|Bacteria,4NDZM@976|Bacteroidetes,1INP2@117747|Sphingobacteriia	976|Bacteroidetes	O	Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions	groL	GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006457,GO:0006458,GO:0008150,GO:0009987,GO:0016465,GO:0032991,GO:0044183,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0051082,GO:0061077,GO:0101031,GO:1990220	-	ko:K04077	ko03018,ko04212,ko04940,ko05134,ko05152,map03018,map04212,map04940,map05134,map05152	-	-	-	ko00000,ko00001,ko03019,ko03029,ko03110,ko04147	-	-	-	Cpn60_TCP1
BYD3_k127_4778880_4	1237149.C900_00301	1.546e-69	243.0	COG1926@1|root,COG1926@2|Bacteria	2|Bacteria	Q	phosphoribosyltransferase	prsT	-	-	ko:K07100	-	-	-	-	ko00000	-	-	-	Pribosyltran
BYD3_k127_4778880_3	1237149.C900_03065	6.757e-91	304.0	COG2823@1|root,COG2823@2|Bacteria,4NJ6H@976|Bacteroidetes,47UYC@768503|Cytophagia	976|Bacteroidetes	S	bacterial OsmY and nodulation domain	-	-	-	-	-	-	-	-	-	-	-	-	BON
BYD3_k127_4778880_8	1237149.C900_00306	8.707e-17	82.0	COG4980@1|root,COG4980@2|Bacteria,4NXMW@976|Bacteroidetes,47SQV@768503|Cytophagia	976|Bacteroidetes	S	YtxH-like protein	-	-	-	-	-	-	-	-	-	-	-	-	YtxH
BYD3_k127_4778880_6	1123248.KB893316_gene4616	7.728e-58	205.0	COG1881@1|root,COG1881@2|Bacteria,4NH14@976|Bacteroidetes,1IT2Y@117747|Sphingobacteriia	976|Bacteroidetes	S	Raf kinase inhibitor-like protein	-	-	-	ko:K06910	-	-	-	-	ko00000	-	-	-	PBP
BYD3_k127_4778880_5	700598.Niako_2301	1.547e-61	221.0	COG4589@1|root,COG4589@2|Bacteria,4NIPM@976|Bacteroidetes,1IQW1@117747|Sphingobacteriia	976|Bacteroidetes	S	Belongs to the CDS family	cdsA	-	2.7.7.41	ko:K00981	ko00564,ko01100,ko01110,ko04070,map00564,map01100,map01110,map04070	M00093	R01799	RC00002	ko00000,ko00001,ko00002,ko01000	-	-	-	CTP_transf_1
BYD3_k127_4778880_1	946077.W5A_00150	4.018e-119	388.0	COG0428@1|root,COG0428@2|Bacteria,4NGQ8@976|Bacteroidetes,1HXM3@117743|Flavobacteriia	976|Bacteroidetes	P	divalent heavy-metal cations transporter	gufA	-	-	ko:K07238	-	-	-	-	ko00000,ko02000	2.A.5.5	-	-	Zip
BYD3_k127_4778880_7	504472.Slin_0619	4.564e-30	141.0	COG3291@1|root,COG3386@1|root,COG5434@1|root,COG3291@2|Bacteria,COG3386@2|Bacteria,COG5434@2|Bacteria,4PN9S@976|Bacteroidetes,47TEI@768503|Cytophagia	2|Bacteria	M	Polymorphic membrane protein Chlamydia	-	-	3.2.1.4	ko:K01179,ko:K08738	ko00500,ko00920,ko01100,ko01120,ko01524,ko02020,ko04115,ko04210,ko04214,ko04215,ko04932,ko05010,ko05012,ko05014,ko05016,ko05134,ko05145,ko05152,ko05161,ko05164,ko05167,ko05168,ko05200,ko05210,ko05222,ko05416,map00500,map00920,map01100,map01120,map01524,map02020,map04115,map04210,map04214,map04215,map04932,map05010,map05012,map05014,map05016,map05134,map05145,map05152,map05161,map05164,map05167,map05168,map05200,map05210,map05222,map05416	M00595	R06200,R10151,R11307,R11308	RC03151,RC03152	ko00000,ko00001,ko00002,ko01000	3.D.4.6	GH5,GH9	-	CHU_C,GSDH,PKD,SGL
BYD3_k127_4778880_9	1454007.JAUG01000071_gene4052	1.195e-07	67.0	2DSCK@1|root,32USS@2|Bacteria	2|Bacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_4778880_2	1121957.ATVL01000013_gene61	1.048e-110	407.0	COG3291@1|root,COG3291@2|Bacteria,4PKMZ@976|Bacteroidetes,47XXW@768503|Cytophagia	976|Bacteroidetes	T	TIGRFAM Por secretion system C-terminal sorting domain	-	-	-	-	-	-	-	-	-	-	-	-	CHU_C
BYD3_k127_4795818_0	1237149.C900_00331	5.526e-179	566.0	COG1488@1|root,COG1488@2|Bacteria,4NFQK@976|Bacteroidetes,47MZ6@768503|Cytophagia	976|Bacteroidetes	H	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP	pncB	-	6.3.4.21	ko:K00763	ko00760,ko01100,map00760,map01100	-	R01724	RC00033	ko00000,ko00001,ko01000	-	-	-	NAPRTase
BYD3_k127_4795818_2	1237149.C900_00330	3.359e-94	312.0	COG1335@1|root,COG1335@2|Bacteria,4NKPP@976|Bacteroidetes,47PIR@768503|Cytophagia	976|Bacteroidetes	Q	Isochorismatase family	pncA	-	3.5.1.19	ko:K08281	ko00760,ko01100,map00760,map01100	-	R01268	RC00100	ko00000,ko00001,ko01000	-	-	-	Isochorismatase
BYD3_k127_4795818_7	1237149.C900_04810	7.205e-39	154.0	COG3291@1|root,COG3391@1|root,COG4733@1|root,COG3291@2|Bacteria,COG3391@2|Bacteria,COG4733@2|Bacteria,4NTXR@976|Bacteroidetes,47SSC@768503|Cytophagia	976|Bacteroidetes	S	Concanavalin A-like lectin/glucanases superfamily	-	-	-	-	-	-	-	-	-	-	-	-	CHU_C,Laminin_G_3
BYD3_k127_4795818_6	1198114.AciX9_0807	2.504e-40	154.0	COG4119@1|root,COG4119@2|Bacteria,3Y51X@57723|Acidobacteria,2JJHV@204432|Acidobacteriia	204432|Acidobacteriia	L	pfam nudix	-	-	-	-	-	-	-	-	-	-	-	-	NUDIX
BYD3_k127_4795818_3	1117108.PAALTS15_03617	1.029e-80	283.0	COG0657@1|root,COG0657@2|Bacteria,1V83G@1239|Firmicutes,4HMC4@91061|Bacilli,26Y1M@186822|Paenibacillaceae	91061|Bacilli	I	alpha/beta hydrolase fold	-	-	-	-	-	-	-	-	-	-	-	-	Abhydrolase_3
BYD3_k127_4795818_4	1123057.P872_19760	8.597e-50	181.0	COG1633@1|root,COG1633@2|Bacteria,4NPEC@976|Bacteroidetes,47SGR@768503|Cytophagia	976|Bacteroidetes	S	Domain of unknown function (DUF2383)	-	-	-	-	-	-	-	-	-	-	-	-	DUF2383
BYD3_k127_4795818_10	761193.Runsl_5527	4.847e-09	57.0	COG2202@1|root,COG4251@1|root,COG2202@2|Bacteria,COG4251@2|Bacteria,4NE3J@976|Bacteroidetes,47MRF@768503|Cytophagia	976|Bacteroidetes	T	Histidine kinase	-	-	-	-	-	-	-	-	-	-	-	-	CZB,HATPase_c,HisKA,PAS_3,PAS_4,PAS_9
BYD3_k127_4795818_8	1270193.JARP01000005_gene3918	3.83e-38	147.0	COG0784@1|root,COG0784@2|Bacteria,4NTYN@976|Bacteroidetes,1I3P2@117743|Flavobacteriia,2NWFH@237|Flavobacterium	976|Bacteroidetes	T	cheY-homologous receiver domain	-	-	-	-	-	-	-	-	-	-	-	-	Response_reg
BYD3_k127_4795818_9	65093.PCC7418_0806	6.239e-25	109.0	2E74N@1|root,331P2@2|Bacteria	2|Bacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_4795818_5	1121481.AUAS01000002_gene3428	2.72e-41	155.0	COG3324@1|root,COG3324@2|Bacteria,4NMFV@976|Bacteroidetes	976|Bacteroidetes	S	Glyoxalase bleomycin resistance protein dioxygenase	-	-	-	ko:K06996	-	-	-	-	ko00000	-	-	-	Glyoxalase
BYD3_k127_4795818_1	1380600.AUYN01000009_gene1471	9.66e-128	414.0	COG2207@1|root,COG2207@2|Bacteria,4NHA5@976|Bacteroidetes,1I053@117743|Flavobacteriia	976|Bacteroidetes	K	helix_turn_helix, arabinose operon control protein	-	-	-	-	-	-	-	-	-	-	-	-	HTH_18
BYD3_k127_4800663_0	1237149.C900_04427	2.253e-278	869.0	COG0577@1|root,COG0577@2|Bacteria,4NDUK@976|Bacteroidetes,47UBY@768503|Cytophagia	976|Bacteroidetes	V	MacB-like periplasmic core domain	-	-	-	ko:K02004	-	M00258	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	FtsX,MacB_PCD
BYD3_k127_4800663_4	1237149.C900_03711	4.742e-96	322.0	COG0121@1|root,COG0121@2|Bacteria	2|Bacteria	S	cellular modified histidine biosynthetic process	egtC	-	-	ko:K18802	-	-	-	-	ko00000	-	-	-	GATase_4
BYD3_k127_4800663_5	1237149.C900_01352	1.033e-61	216.0	COG0229@1|root,COG0229@2|Bacteria,4NQEY@976|Bacteroidetes,47PZ4@768503|Cytophagia	976|Bacteroidetes	O	peptide methionine sulfoxide reductase	msrB	-	1.8.4.12	ko:K07305	-	-	-	-	ko00000,ko01000	-	-	-	SelR
BYD3_k127_4800663_7	1279009.ADICEAN_01959	1.831e-36	144.0	2E3CB@1|root,32YBM@2|Bacteria,4NU80@976|Bacteroidetes,47Y2T@768503|Cytophagia	976|Bacteroidetes	S	Domain of unknown function (DUF4154)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4154
BYD3_k127_4800663_1	1237149.C900_01354	1.62e-251	792.0	COG2203@1|root,COG2203@2|Bacteria,4NICW@976|Bacteroidetes,47NI3@768503|Cytophagia	976|Bacteroidetes	T	Domain present in phytochromes and cGMP-specific phosphodiesterases.	-	-	-	-	-	-	-	-	-	-	-	-	GAF_2,PAS_9
BYD3_k127_4800663_3	1237149.C900_05060	3.536e-108	354.0	COG2884@1|root,COG2884@2|Bacteria,4NEP2@976|Bacteroidetes,47MP4@768503|Cytophagia	976|Bacteroidetes	D	PFAM ABC transporter	ftsE	-	-	ko:K09812	ko02010,map02010	M00256	-	-	ko00000,ko00001,ko00002,ko02000,ko03036	3.A.1.140	-	-	ABC_tran
BYD3_k127_4800663_2	880070.Cycma_0309	2.673e-117	379.0	COG0176@1|root,COG0176@2|Bacteria,4NFVZ@976|Bacteroidetes,47JX6@768503|Cytophagia	976|Bacteroidetes	G	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway	tal	-	2.2.1.2	ko:K00616,ko:K08314	ko00030,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map01100,map01110,map01120,map01130,map01200,map01230	M00004,M00007	R01827	RC00439,RC00604	ko00000,ko00001,ko00002,ko01000	-	-	-	TAL_FSA
BYD3_k127_4800663_8	272134.KB731324_gene1337	4.687e-30	126.0	COG1670@1|root,COG1670@2|Bacteria,1G5GV@1117|Cyanobacteria,1HAQ0@1150|Oscillatoriales	1117|Cyanobacteria	J	PFAM Acetyltransferase (GNAT) family	-	-	2.3.1.128	ko:K03790	-	-	-	-	ko00000,ko01000,ko03009	-	-	-	Acetyltransf_3
BYD3_k127_4800663_6	1089547.KB913013_gene2967	5.974e-52	188.0	2B1RZ@1|root,31U7Q@2|Bacteria,4NR0B@976|Bacteroidetes,47Q5B@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_4800663_11	1121904.ARBP01000014_gene104	0.000945	43.0	COG1595@1|root,COG1595@2|Bacteria,4NVCP@976|Bacteroidetes,47RQU@768503|Cytophagia	976|Bacteroidetes	K	Sigma-70, region 4	-	-	-	-	-	-	-	-	-	-	-	-	Sigma70_r2,Sigma70_r4,Sigma70_r4_2
BYD3_k127_4800857_3	929703.KE386491_gene3891	1.326e-52	195.0	COG1723@1|root,COG1723@2|Bacteria,4NFED@976|Bacteroidetes,47V2F@768503|Cytophagia	976|Bacteroidetes	S	Uncharacterised ACR, YagE family COG1723	-	-	-	-	-	-	-	-	-	-	-	-	DUF155
BYD3_k127_4800857_0	1313301.AUGC01000013_gene1277	4.046e-89	301.0	28JIP@1|root,2Z82C@2|Bacteria,4NFN9@976|Bacteroidetes	976|Bacteroidetes	S	S1 P1 nuclease	-	-	-	-	-	-	-	-	-	-	-	-	S1-P1_nuclease
BYD3_k127_4800857_4	1168034.FH5T_07125	7.836e-52	188.0	COG0614@1|root,COG0614@2|Bacteria,4NQQ6@976|Bacteroidetes,2FTW1@200643|Bacteroidia	976|Bacteroidetes	P	PD-(D/E)XK nuclease superfamily	-	-	-	-	-	-	-	-	-	-	-	-	PDDEXK_3
BYD3_k127_4800857_1	929556.Solca_1145	3.384e-81	274.0	COG0494@1|root,COG0494@2|Bacteria,4NHER@976|Bacteroidetes,1IRG1@117747|Sphingobacteriia	976|Bacteroidetes	L	PFAM NUDIX hydrolase	nudK	-	-	-	-	-	-	-	-	-	-	-	NUDIX
BYD3_k127_4800857_2	1189612.A33Q_0674	2.283e-55	201.0	COG0349@1|root,COG0349@2|Bacteria,4NP3B@976|Bacteroidetes,47QFS@768503|Cytophagia	976|Bacteroidetes	J	3'-5' exonuclease	rnd	-	-	-	-	-	-	-	-	-	-	-	DNA_pol_A_exo1
BYD3_k127_4809081_0	1237149.C900_04789	2.468e-316	980.0	COG0022@1|root,COG1071@1|root,COG0022@2|Bacteria,COG1071@2|Bacteria,4NE4A@976|Bacteroidetes,47KBI@768503|Cytophagia	976|Bacteroidetes	C	Dehydrogenase E1 component	pdhB	-	2.2.1.1	ko:K00615	ko00030,ko00710,ko01051,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00710,map01051,map01100,map01110,map01120,map01130,map01200,map01230	M00004,M00007,M00165,M00167	R01067,R01641,R01830,R06590	RC00032,RC00226,RC00571,RC01560	ko00000,ko00001,ko00002,ko01000	-	-	-	E1_dh,Transket_pyr,Transketolase_C
BYD3_k127_4809081_5	269797.Mbar_A0972	0.0007236	47.0	COG2105@1|root,arCOG03271@2157|Archaea	2157|Archaea	S	transferase activity, transferring acyl groups	-	-	-	-	-	-	-	-	-	-	-	-	GGACT
BYD3_k127_4809081_1	1237149.C900_04790	3.564e-196	616.0	COG0686@1|root,COG0686@2|Bacteria,4NE8F@976|Bacteroidetes,47K8G@768503|Cytophagia	976|Bacteroidetes	E	Belongs to the AlaDH PNT family	ald	-	1.4.1.1	ko:K00259	ko00250,ko00430,ko01100,map00250,map00430,map01100	-	R00396	RC00008	ko00000,ko00001,ko01000	-	-	-	AlaDh_PNT_C,AlaDh_PNT_N
BYD3_k127_4809081_4	153721.MYP_2150	1.132e-50	183.0	COG4096@1|root,COG4096@2|Bacteria,4NNKI@976|Bacteroidetes,47QPJ@768503|Cytophagia	976|Bacteroidetes	V	Type I restriction enzyme R Protein	-	-	-	-	-	-	-	-	-	-	-	-	HSDR_N_2
BYD3_k127_4809081_2	700598.Niako_5038	3.657e-132	424.0	COG2820@1|root,COG2820@2|Bacteria,4NESQ@976|Bacteroidetes,1IP9I@117747|Sphingobacteriia	976|Bacteroidetes	F	Catalyzes the hydrolysis of AMP to form adenine and ribose 5-phosphate using water as the nucleophile	amn	-	3.2.2.4	ko:K01241	ko00230,map00230	-	R00182	RC00063,RC00318	ko00000,ko00001,ko01000	-	-	-	PNP_UDP_1
BYD3_k127_4809081_3	1237149.C900_04795	2.985e-87	294.0	COG2270@1|root,COG2270@2|Bacteria,4NEKI@976|Bacteroidetes,47JQM@768503|Cytophagia	976|Bacteroidetes	S	PFAM Vacuole effluxer Atg22 like	-	-	-	ko:K06902	ko04138,map04138	-	-	-	ko00000,ko00001,ko02000,ko04131	2.A.1.24,9.A.15.1	-	-	ATG22
BYD3_k127_4849584_10	1123277.KB893195_gene5750	2.662e-05	48.0	COG4941@1|root,COG4941@2|Bacteria,4NGCS@976|Bacteroidetes,47M8X@768503|Cytophagia	976|Bacteroidetes	K	TIGRFAM RNA polymerase sigma factor, sigma-70 family	-	-	-	ko:K03088	-	-	-	-	ko00000,ko03021	-	-	-	Sigma70_r2,Sigma70_r4_2
BYD3_k127_4849584_3	1408813.AYMG01000025_gene2659	2.824e-124	405.0	COG1056@1|root,COG3172@1|root,COG1056@2|Bacteria,COG3172@2|Bacteria,4NFNZ@976|Bacteroidetes,1J0A0@117747|Sphingobacteriia	976|Bacteroidetes	H	ATPase kinase involved in NAD metabolism	nadR	-	-	-	-	-	-	-	-	-	-	-	AAA_28
BYD3_k127_4849584_9	929713.NIASO_13715	3.785e-18	89.0	COG5652@1|root,COG5652@2|Bacteria,4NXUQ@976|Bacteroidetes	976|Bacteroidetes	S	Psort location CytoplasmicMembrane, score	fjo27	-	-	-	-	-	-	-	-	-	-	-	VanZ
BYD3_k127_4849584_5	1408813.AYMG01000025_gene2658	5.895e-104	341.0	COG3201@1|root,COG3201@2|Bacteria,4NFJI@976|Bacteroidetes,1ISRB@117747|Sphingobacteriia	976|Bacteroidetes	H	TIGRFAM Nicotinamide mononucleotide transporter PnuC	pnuC	-	-	ko:K03811	-	-	-	-	ko00000,ko02000	4.B.1.1	-	-	NMN_transporter
BYD3_k127_4849584_0	1237149.C900_03217	1.27e-244	762.0	COG1012@1|root,COG1012@2|Bacteria,4NEB7@976|Bacteroidetes,47JKD@768503|Cytophagia	976|Bacteroidetes	C	Belongs to the aldehyde dehydrogenase family	-	-	1.2.1.3,1.2.1.32,1.2.1.85	ko:K00128,ko:K10217	ko00010,ko00053,ko00071,ko00280,ko00310,ko00330,ko00340,ko00362,ko00380,ko00410,ko00561,ko00620,ko00622,ko00625,ko00903,ko00981,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00053,map00071,map00280,map00310,map00330,map00340,map00362,map00380,map00410,map00561,map00620,map00622,map00625,map00903,map00981,map01100,map01110,map01120,map01130,map01220	M00038,M00135,M00569	R00264,R00631,R00710,R00904,R01752,R01986,R02549,R02678,R02762,R02940,R02957,R03283,R03869,R03889,R04065,R04506,R04903,R05050,R05237,R05238,R05286,R05353,R06366,R08146	RC00047,RC00071,RC00080,RC00186,RC00218,RC00242,RC00254,RC00816,RC01500	ko00000,ko00001,ko00002,ko01000	-	-	-	Aldedh
BYD3_k127_4849584_4	468059.AUHA01000002_gene602	5.071e-104	344.0	COG1028@1|root,COG1028@2|Bacteria,4NICN@976|Bacteroidetes,1IRUS@117747|Sphingobacteriia	976|Bacteroidetes	IQ	PFAM Short-chain dehydrogenase reductase SDR	-	-	1.1.1.100	ko:K00059	ko00061,ko00333,ko00780,ko01040,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01040,map01100,map01130,map01212	M00083,M00572	R04533,R04534,R04536,R04543,R04566,R04953,R04964,R07759,R07763,R10116,R10120,R11671	RC00029,RC00117	ko00000,ko00001,ko00002,ko01000,ko01004	-	-	-	adh_short_C2
BYD3_k127_4849584_6	755732.Fluta_2018	4.4e-82	275.0	COG1917@1|root,COG1917@2|Bacteria,4PKJ0@976|Bacteroidetes,1IJAI@117743|Flavobacteriia,2PAU2@246874|Cryomorphaceae	976|Bacteroidetes	H	Catalyzes the oxidative ring opening of 3- hydroxyanthranilate to 2-amino-3-carboxymuconate semialdehyde, which spontaneously cyclizes to quinolinate	nbaC	-	1.13.11.6	ko:K00452	ko00380,ko01100,map00380,map01100	M00038	R02665	RC00387	ko00000,ko00001,ko00002,ko01000	-	-	-	3-HAO
BYD3_k127_4849584_7	198094.BA_2039	1.528e-45	170.0	COG0350@1|root,COG0350@2|Bacteria,1VA03@1239|Firmicutes,4HKC0@91061|Bacilli,1ZGW4@1386|Bacillus	91061|Bacilli	L	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated	ogt	GO:0003674,GO:0003824,GO:0003908,GO:0006139,GO:0006259,GO:0006281,GO:0006304,GO:0006307,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008168,GO:0008172,GO:0009987,GO:0016740,GO:0016741,GO:0032259,GO:0033554,GO:0034641,GO:0035510,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:1901360	2.1.1.63	ko:K00567	-	-	-	-	ko00000,ko01000,ko03400	-	-	-	DNA_binding_1,Methyltransf_1N
BYD3_k127_4849584_1	926549.KI421517_gene817	5.541e-183	581.0	COG3844@1|root,COG3844@2|Bacteria,4NECS@976|Bacteroidetes,47KPP@768503|Cytophagia	976|Bacteroidetes	E	Catalyzes the cleavage of L-kynurenine (L-Kyn) and L-3- hydroxykynurenine (L-3OHKyn) into anthranilic acid (AA) and 3- hydroxyanthranilic acid (3-OHAA), respectively	kynU	-	3.7.1.3	ko:K01556	ko00380,ko01100,map00380,map01100	M00038	R00987,R02668,R03936	RC00284,RC00415	ko00000,ko00001,ko00002,ko01000	-	-	-	Aminotran_5
BYD3_k127_4849584_2	1237149.C900_03222	5.134e-180	574.0	COG0654@1|root,COG0654@2|Bacteria,4NGIU@976|Bacteroidetes,47KM9@768503|Cytophagia	976|Bacteroidetes	H	Catalyzes the hydroxylation of L-kynurenine (L-Kyn) to form 3-hydroxy-L-kynurenine (L-3OHKyn). Required for synthesis of quinolinic acid	kmo	-	1.14.13.9	ko:K00486	ko00380,ko01100,map00380,map01100	M00038	R01960	RC00046	ko00000,ko00001,ko00002,ko01000	-	-	-	FAD_binding_3
BYD3_k127_4849584_8	1237149.C900_03224	1.458e-44	165.0	COG4623@1|root,COG4623@2|Bacteria,4NHFW@976|Bacteroidetes,47NX6@768503|Cytophagia	976|Bacteroidetes	M	soluble lytic transglycosylase fused to an ABC-type amino acid-binding protein	mltF	-	-	ko:K18691	-	-	-	-	ko00000,ko01000,ko01011	-	-	-	SBP_bac_3,SLT
BYD3_k127_4851352_7	1232410.KI421428_gene1088	3.528e-12	67.0	COG0449@1|root,COG0449@2|Bacteria,1RGWX@1224|Proteobacteria,42TA9@68525|delta/epsilon subdivisions,2WPHJ@28221|Deltaproteobacteria	28221|Deltaproteobacteria	M	ORF6N domain	-	-	-	-	-	-	-	-	-	-	-	-	ORF6N
BYD3_k127_4851352_5	153721.MYP_4730	1.715e-38	146.0	COG2315@1|root,COG2315@2|Bacteria,4NS6J@976|Bacteroidetes,47R6I@768503|Cytophagia	976|Bacteroidetes	S	YjbR	-	-	-	-	-	-	-	-	-	-	-	-	YjbR
BYD3_k127_4851352_6	1279009.ADICEAN_04149	1.292e-19	91.0	2EGC0@1|root,33A3T@2|Bacteria,4NXPB@976|Bacteroidetes,47SUC@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_4851352_0	643867.Ftrac_0021	1.86e-321	993.0	COG0821@1|root,COG0821@2|Bacteria,4NE63@976|Bacteroidetes,47KGW@768503|Cytophagia	976|Bacteroidetes	I	Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate	ispG	GO:0003674,GO:0003824,GO:0006081,GO:0006082,GO:0006090,GO:0006629,GO:0006644,GO:0006720,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0008654,GO:0009058,GO:0009240,GO:0009987,GO:0016491,GO:0016725,GO:0019288,GO:0019637,GO:0019682,GO:0019752,GO:0032787,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0046429,GO:0046490,GO:0052592,GO:0055114,GO:0071704,GO:0090407,GO:1901135,GO:1901576	1.17.7.1,1.17.7.3	ko:K03526	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	M00096	R08689,R10859	RC01486	ko00000,ko00001,ko00002,ko01000	-	-	-	GcpE
BYD3_k127_4851352_4	1124780.ANNU01000003_gene1418	1.145e-89	301.0	COG4221@1|root,COG4221@2|Bacteria,4NG8J@976|Bacteroidetes,47M5I@768503|Cytophagia	976|Bacteroidetes	S	Belongs to the short-chain dehydrogenases reductases (SDR) family	-	-	-	-	-	-	-	-	-	-	-	-	adh_short
BYD3_k127_4851352_2	1237149.C900_03289	3.155e-105	347.0	COG0767@1|root,COG0767@2|Bacteria,4NEZ8@976|Bacteroidetes,47N59@768503|Cytophagia	976|Bacteroidetes	Q	ABC-type transport system involved in resistance to organic solvents permease component	mlaE	-	-	ko:K02066	ko02010,map02010	M00210,M00669,M00670	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.27	-	-	MlaE
BYD3_k127_4851352_1	1237149.C900_03288	1.166e-114	376.0	COG1127@1|root,COG1127@2|Bacteria,4NETG@976|Bacteroidetes,47K20@768503|Cytophagia	976|Bacteroidetes	Q	ABC-type transport system involved in resistance to organic solvents, ATPase component	metN	-	-	ko:K02065	ko02010,map02010	M00210,M00669,M00670	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.27	-	-	ABC_tran
BYD3_k127_4851352_3	760192.Halhy_4416	6.193e-90	304.0	COG2311@1|root,COG2311@2|Bacteria	2|Bacteria	S	Protein of unknown function (DUF418)	-	-	-	ko:K07148	-	-	-	-	ko00000	-	-	-	DUF418
BYD3_k127_485200_3	1123248.KB893315_gene2985	5.566e-44	168.0	COG0582@1|root,COG0582@2|Bacteria,4NDZJ@976|Bacteroidetes,1J0Q4@117747|Sphingobacteriia	976|Bacteroidetes	L	Belongs to the 'phage' integrase family	-	-	-	-	-	-	-	-	-	-	-	-	Arm-DNA-bind_5,Phage_int_SAM_5,Phage_integrase
BYD3_k127_485200_0	1237149.C900_01252	2.667e-183	579.0	COG2812@1|root,COG2812@2|Bacteria,4NE8A@976|Bacteroidetes,47KSQ@768503|Cytophagia	976|Bacteroidetes	L	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity	dnaX	-	2.7.7.7	ko:K02343	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	M00260	R00375,R00376,R00377,R00378	RC02795	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	-	-	-	DNA_pol3_delta2,DNA_pol3_gamma3
BYD3_k127_485200_4	1124780.ANNU01000075_gene828	2.746e-15	83.0	COG2812@1|root,COG2812@2|Bacteria,4NXJ0@976|Bacteroidetes	976|Bacteroidetes	L	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_485200_5	929556.Solca_1759	1.102e-13	75.0	2EM7W@1|root,33EX0@2|Bacteria,4P5SH@976|Bacteroidetes,1J02V@117747|Sphingobacteriia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_485200_2	551275.KB899544_gene1855	7.77e-61	214.0	COG0243@1|root,COG0243@2|Bacteria,1MU6B@1224|Proteobacteria,2TTUX@28211|Alphaproteobacteria,43ZII@69657|Hyphomonadaceae	28211|Alphaproteobacteria	C	Molydopterin dinucleotide binding domain	fdhF	-	1.17.1.9	ko:K00123	ko00630,ko00680,ko01100,ko01120,ko01200,map00630,map00680,map01100,map01120,map01200	-	R00519	RC02796	ko00000,ko00001,ko01000	-	-	-	Molybdopterin,Molydop_binding
BYD3_k127_485200_1	1535287.JP74_20705	2.495e-133	433.0	COG0243@1|root,COG0243@2|Bacteria,1MU6B@1224|Proteobacteria,2TTUX@28211|Alphaproteobacteria,3N7QS@45401|Hyphomicrobiaceae	28211|Alphaproteobacteria	C	Molydopterin dinucleotide binding domain	fdhF	-	1.17.1.9	ko:K00123	ko00630,ko00680,ko01100,ko01120,ko01200,map00630,map00680,map01100,map01120,map01200	-	R00519	RC02796	ko00000,ko00001,ko01000	-	-	-	Molybdopterin,Molydop_binding
BYD3_k127_4872734_11	1120968.AUBX01000018_gene2165	8.453e-15	78.0	COG4775@1|root,COG4775@2|Bacteria,4NF38@976|Bacteroidetes,47KMS@768503|Cytophagia	976|Bacteroidetes	M	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_4872734_8	471854.Dfer_5395	4.443e-36	139.0	COG0640@1|root,COG0640@2|Bacteria,4NSDX@976|Bacteroidetes,47R1P@768503|Cytophagia	976|Bacteroidetes	K	helix_turn_helix, Arsenical Resistance Operon Repressor	-	-	-	-	-	-	-	-	-	-	-	-	HTH_20,HTH_5
BYD3_k127_4872734_3	1408433.JHXV01000027_gene3718	4.022e-64	222.0	COG3832@1|root,COG3832@2|Bacteria,4NFVK@976|Bacteroidetes,1I3A4@117743|Flavobacteriia,2PBQI@246874|Cryomorphaceae	976|Bacteroidetes	S	Activator of Hsp90 ATPase homolog 1-like protein	-	-	-	-	-	-	-	-	-	-	-	-	3-dmu-9_3-mt,AHSA1
BYD3_k127_4872734_6	491952.Mar181_1162	3.121e-42	158.0	COG1733@1|root,COG1733@2|Bacteria,1RF0R@1224|Proteobacteria,1S6ND@1236|Gammaproteobacteria,1XK2Z@135619|Oceanospirillales	135619|Oceanospirillales	K	transcriptional	-	-	-	-	-	-	-	-	-	-	-	-	HxlR
BYD3_k127_4872734_9	1286632.P278_00790	2.063e-35	138.0	COG3070@1|root,COG3070@2|Bacteria,4NSGZ@976|Bacteroidetes,1I4CE@117743|Flavobacteriia	976|Bacteroidetes	K	TfoX N-terminal domain	-	-	-	-	-	-	-	-	-	-	-	-	TfoX_N
BYD3_k127_4872734_4	1121904.ARBP01000086_gene1912	4.623e-59	215.0	COG3338@1|root,COG3338@2|Bacteria	2|Bacteria	P	carbonate dehydratase activity	cah	-	4.2.1.1	ko:K01674	ko00910,map00910	-	R00132,R10092	RC02807	ko00000,ko00001,ko01000	-	-	-	Carb_anhydrase
BYD3_k127_4872734_5	243090.RB9520	2.473e-50	193.0	COG2911@1|root,COG2911@2|Bacteria,2J50X@203682|Planctomycetes	203682|Planctomycetes	S	Porin subfamily	-	-	-	-	-	-	-	-	-	-	-	-	Porin_2
BYD3_k127_4872734_7	700598.Niako_2485	3.725e-41	162.0	2DWQN@1|root,341FB@2|Bacteria,4P4AQ@976|Bacteroidetes	976|Bacteroidetes	S	Protein of unknown function (DUF3575)	-	-	-	-	-	-	-	-	-	-	-	-	DUF3575
BYD3_k127_4872734_0	1121904.ARBP01000018_gene2707	5.75e-186	591.0	COG0729@1|root,COG0729@2|Bacteria,4PMQ2@976|Bacteroidetes,47YNU@768503|Cytophagia	976|Bacteroidetes	M	Surface antigen	-	-	-	-	-	-	-	-	-	-	-	-	Bac_surface_Ag
BYD3_k127_4872734_13	1121904.ARBP01000003_gene6370	3.75e-11	75.0	COG4743@1|root,COG4743@2|Bacteria	2|Bacteria	S	Protein of unknown function (DUF1616)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1616
BYD3_k127_4872734_10	1189612.A33Q_2029	1.882e-32	129.0	COG1695@1|root,COG1695@2|Bacteria,4NQBA@976|Bacteroidetes,47RGZ@768503|Cytophagia	976|Bacteroidetes	K	Transcriptional regulator PadR-like family	-	-	-	-	-	-	-	-	-	-	-	-	PadR
BYD3_k127_4872734_2	376686.Fjoh_2208	1.152e-182	579.0	COG3746@1|root,COG3746@2|Bacteria,4NH24@976|Bacteroidetes,1HXMY@117743|Flavobacteriia,2NU6X@237|Flavobacterium	976|Bacteroidetes	P	Phosphate-selective porin O and P	-	-	-	-	-	-	-	-	-	-	-	-	Porin_O_P
BYD3_k127_4872734_1	1121904.ARBP01000010_gene2392	9.592e-183	600.0	COG0577@1|root,COG0577@2|Bacteria,4NDUK@976|Bacteroidetes,47JJN@768503|Cytophagia	976|Bacteroidetes	V	FtsX-like permease family	-	-	-	ko:K02004	-	M00258	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	FtsX,MacB_PCD
BYD3_k127_4891696_3	700598.Niako_0836	3.791e-38	148.0	COG3439@1|root,COG3439@2|Bacteria,4NQRI@976|Bacteroidetes	976|Bacteroidetes	S	Domain of unknown function DUF302	-	-	-	-	-	-	-	-	-	-	-	-	DUF302
BYD3_k127_4891696_4	1313301.AUGC01000001_gene1536	3.223e-32	131.0	COG0071@1|root,COG0071@2|Bacteria,4NQXY@976|Bacteroidetes	976|Bacteroidetes	O	Belongs to the small heat shock protein (HSP20) family	-	-	-	ko:K13993	ko04141,map04141	-	-	-	ko00000,ko00001,ko03110	-	-	-	HSP20
BYD3_k127_4891696_2	1237149.C900_00541	3.971e-57	209.0	COG0589@1|root,COG0589@2|Bacteria,4NFZ5@976|Bacteroidetes,47PIA@768503|Cytophagia	976|Bacteroidetes	T	Universal stress protein	-	-	-	-	-	-	-	-	-	-	-	-	Usp
BYD3_k127_4891696_0	313606.M23134_07603	2.693e-224	720.0	COG2217@1|root,COG2217@2|Bacteria,4NEI1@976|Bacteroidetes,47N4X@768503|Cytophagia	976|Bacteroidetes	P	ATPase, P-type (transporting), HAD superfamily, subfamily IC	ccoI	-	3.6.3.4,3.6.3.54	ko:K01533,ko:K17686	ko01524,ko04016,map01524,map04016	-	R00086	RC00002	ko00000,ko00001,ko01000	3.A.3.5	-	-	ATPase-cat_bd,E1-E2_ATPase,HMA,Hydrolase
BYD3_k127_4891696_5	313606.M23134_07604	6.958e-13	70.0	COG3197@1|root,COG3197@2|Bacteria,4NUR7@976|Bacteroidetes,47SPA@768503|Cytophagia	976|Bacteroidetes	P	TIGRFAM cytochrome oxidase maturation protein, cbb3-type	ccoS	-	-	-	-	-	-	-	-	-	-	-	FixS
BYD3_k127_4891696_1	926549.KI421517_gene2767	3.466e-177	565.0	COG0635@1|root,COG0635@2|Bacteria,4NEY5@976|Bacteroidetes,47K3T@768503|Cytophagia	976|Bacteroidetes	H	Belongs to the anaerobic coproporphyrinogen-III oxidase family	hemN	-	-	-	-	-	-	-	-	-	-	-	HemN_C,Radical_SAM
BYD3_k127_4909602_14	1123057.P872_18055	5.606e-23	98.0	COG2096@1|root,COG2096@2|Bacteria,4NFHQ@976|Bacteroidetes,47P8Y@768503|Cytophagia	976|Bacteroidetes	S	PFAM Cobalamin adenosyltransferase	yvqK	-	2.5.1.17	ko:K00798	ko00860,ko01100,map00860,map01100	M00122	R01492,R05220,R07268	RC00533	ko00000,ko00001,ko00002,ko01000	-	-	-	Cob_adeno_trans
BYD3_k127_4909602_4	1237149.C900_05489	1.317e-120	392.0	COG1136@1|root,COG1136@2|Bacteria,4NE5N@976|Bacteroidetes,47KDU@768503|Cytophagia	976|Bacteroidetes	V	ABC transporter	macB	-	-	ko:K02003	-	M00258	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	ABC_tran
BYD3_k127_4909602_10	1237149.C900_01864	5.768e-71	250.0	COG1073@1|root,COG1073@2|Bacteria,4NGDK@976|Bacteroidetes,47Q3Y@768503|Cytophagia	976|Bacteroidetes	S	Alpha/beta hydrolase family	-	-	-	-	-	-	-	-	-	-	-	-	Abhydrolase_1,Abhydrolase_4,Abhydrolase_6,Hydrolase_4
BYD3_k127_4909602_7	349161.Dred_0589	1.284e-75	261.0	COG3332@1|root,COG3332@2|Bacteria,1UYHE@1239|Firmicutes,24I1W@186801|Clostridia,264ZH@186807|Peptococcaceae	186801|Clostridia	S	Transport and Golgi organisation 2	-	-	-	-	-	-	-	-	-	-	-	-	TANGO2
BYD3_k127_4909602_6	1237149.C900_01860	2.482e-82	278.0	COG0164@1|root,COG0164@2|Bacteria,4NGVR@976|Bacteroidetes,47KXS@768503|Cytophagia	976|Bacteroidetes	L	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids	rnhB	-	3.1.26.4	ko:K03470	ko03030,map03030	-	-	-	ko00000,ko00001,ko01000,ko03032	-	-	-	RNase_HII
BYD3_k127_4909602_8	1237149.C900_01858	1.085e-71	246.0	COG0494@1|root,COG0494@2|Bacteria,4NMHV@976|Bacteroidetes,47P7M@768503|Cytophagia	976|Bacteroidetes	L	pfam nudix	nudF	-	-	-	-	-	-	-	-	-	-	-	NUDIX
BYD3_k127_4909602_3	1237149.C900_01857	7.252e-145	471.0	COG0534@1|root,COG0534@2|Bacteria,4NEBB@976|Bacteroidetes,47KYV@768503|Cytophagia	976|Bacteroidetes	V	efflux protein, MATE family	norM	-	-	ko:K03327	-	-	-	-	ko00000,ko02000	2.A.66.1	-	-	MatE
BYD3_k127_4909602_9	1185876.BN8_00288	4.786e-71	244.0	COG1607@1|root,COG1607@2|Bacteria,4NMK1@976|Bacteroidetes,47N9Z@768503|Cytophagia	976|Bacteroidetes	I	PFAM thioesterase superfamily	-	-	-	-	-	-	-	-	-	-	-	-	4HBT
BYD3_k127_4909602_2	1121104.AQXH01000003_gene415	1.362e-191	606.0	COG0006@1|root,COG0006@2|Bacteria,4NF0F@976|Bacteroidetes,1IV0D@117747|Sphingobacteriia	976|Bacteroidetes	E	Metallopeptidase family M24	-	-	-	-	-	-	-	-	-	-	-	-	Peptidase_M24
BYD3_k127_4909602_5	1237149.C900_04001	1.099e-85	291.0	COG0204@1|root,COG0204@2|Bacteria,4NG5R@976|Bacteroidetes,47JI7@768503|Cytophagia	976|Bacteroidetes	I	TIGRFAM 1-acyl-sn-glycerol-3-phosphate acyltransferases	plsC	-	2.3.1.51	ko:K00655	ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110	M00089	R02241,R09381	RC00004,RC00037,RC00039	ko00000,ko00001,ko00002,ko01000,ko01004	-	-	-	Acyltransferase
BYD3_k127_4909602_12	1189612.A33Q_3082	2.997e-34	133.0	COG0721@1|root,COG0721@2|Bacteria,4NV0A@976|Bacteroidetes,47QCX@768503|Cytophagia	976|Bacteroidetes	J	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)	gatC	-	6.3.5.6,6.3.5.7	ko:K02435	ko00970,ko01100,map00970,map01100	-	R03905,R04212	RC00010	ko00000,ko00001,ko01000,ko03029	-	-	-	Glu-tRNAGln
BYD3_k127_4909602_1	1237149.C900_03999	3.209e-202	664.0	COG0457@1|root,COG0457@2|Bacteria,4NGQ7@976|Bacteroidetes,47KHQ@768503|Cytophagia	976|Bacteroidetes	U	Tetratricopeptide repeat	-	-	-	-	-	-	-	-	-	-	-	-	TPR_2,TPR_8
BYD3_k127_4909602_11	700598.Niako_5254	1.42e-53	193.0	COG2940@1|root,COG2940@2|Bacteria,4NQ3D@976|Bacteroidetes	976|Bacteroidetes	S	SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain	-	-	-	ko:K07117	-	-	-	-	ko00000	-	-	-	SET
BYD3_k127_4909602_0	485918.Cpin_2250	0.0	1145.0	COG4774@1|root,COG4774@2|Bacteria,4PKB8@976|Bacteroidetes,1J0MI@117747|Sphingobacteriia	976|Bacteroidetes	P	TonB dependent receptor	-	-	-	ko:K02014	-	-	-	-	ko00000,ko02000	1.B.14	-	-	CarbopepD_reg_2,Plug,TonB_dep_Rec
BYD3_k127_4909602_13	471854.Dfer_2053	9.614e-26	109.0	COG0226@1|root,COG0226@2|Bacteria,4NHTF@976|Bacteroidetes,47UTM@768503|Cytophagia	976|Bacteroidetes	P	Part of the ABC transporter complex PstSACB involved in phosphate import	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_4911110_4	1535422.ND16A_1629	1.906e-15	79.0	COG1680@1|root,COG1680@2|Bacteria,1NHIY@1224|Proteobacteria,1S719@1236|Gammaproteobacteria	1236|Gammaproteobacteria	V	Beta-lactamase class C and other penicillin binding proteins	-	-	-	-	-	-	-	-	-	-	-	-	Beta-lactamase
BYD3_k127_4911110_5	945713.IALB_0165	6.255e-15	80.0	COG3212@1|root,COG3212@2|Bacteria	2|Bacteria	T	peptidase	ykoJ	-	-	-	-	-	-	-	-	-	-	-	HATPase_c,HATPase_c_3,PepSY,PepSY_like
BYD3_k127_4911110_3	485918.Cpin_2807	4.815e-92	314.0	COG0265@1|root,COG0265@2|Bacteria,4NGRE@976|Bacteroidetes	976|Bacteroidetes	O	smart pdz dhr glgf	-	-	-	-	-	-	-	-	-	-	-	-	PDZ_2,Trypsin_2
BYD3_k127_4911110_1	1121904.ARBP01000013_gene371	2.587e-122	415.0	2CB42@1|root,2Z7Y3@2|Bacteria,4NEUY@976|Bacteroidetes,47N6R@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_4911110_6	1121285.AUFK01000001_gene1974	7.344e-12	71.0	2EAT9@1|root,334V5@2|Bacteria,4NUP8@976|Bacteroidetes,1I9XZ@117743|Flavobacteriia,3ZS8V@59732|Chryseobacterium	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_4911110_0	1408813.AYMG01000008_gene3914	0.0	1710.0	COG3696@1|root,COG3696@2|Bacteria,4P36A@976|Bacteroidetes,1IQBJ@117747|Sphingobacteriia	976|Bacteroidetes	P	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family	-	-	-	ko:K15726	-	-	-	-	ko00000,ko02000	2.A.6.1.2	-	-	ACR_tran,OEP
BYD3_k127_4911110_2	1408813.AYMG01000008_gene3913	2.781e-106	356.0	COG0845@1|root,COG0845@2|Bacteria,4NDW5@976|Bacteroidetes,1IQBG@117747|Sphingobacteriia	976|Bacteroidetes	M	Barrel-sandwich domain of CusB or HlyD membrane-fusion	-	-	-	ko:K15727	-	-	-	-	ko00000,ko02000	8.A.1.2.1	-	-	HlyD_D23
BYD3_k127_4912227_2	485918.Cpin_4167	2.524e-60	213.0	COG2318@1|root,COG2318@2|Bacteria,4NNMT@976|Bacteroidetes,1IXUX@117747|Sphingobacteriia	976|Bacteroidetes	S	DinB family	-	-	-	-	-	-	-	-	-	-	-	-	DinB
BYD3_k127_4912227_0	504472.Slin_6373	1.157e-173	556.0	COG0277@1|root,COG0277@2|Bacteria,4NGC5@976|Bacteroidetes,47MIC@768503|Cytophagia	976|Bacteroidetes	C	D-arabinono-1,4-lactone oxidase	-	-	1.1.3.41	ko:K00594	ko00040,ko00051,ko01100,map00040,map00051,map01100	-	R07152,R11620	RC00108,RC00133	ko00000,ko00001,ko01000	-	-	-	ALO,FAD_binding_4
BYD3_k127_4912227_1	1121373.KB903666_gene1302	3.29e-146	475.0	COG0477@1|root,COG2814@2|Bacteria,4NG6X@976|Bacteroidetes,47KCB@768503|Cytophagia	976|Bacteroidetes	EGP	TIGRFAM Drug resistance transporter Bcr CflA subfamily	bcr	-	-	ko:K03446,ko:K07552	-	M00701	-	-	ko00000,ko00002,ko02000	2.A.1.2,2.A.1.3	-	-	MFS_1
BYD3_k127_4912227_3	761193.Runsl_0496	1.487e-48	175.0	COG1051@1|root,COG1051@2|Bacteria,4NIYI@976|Bacteroidetes,47N3I@768503|Cytophagia	976|Bacteroidetes	F	NUDIX hydrolase	-	-	-	-	-	-	-	-	-	-	-	-	NUDIX
BYD3_k127_4916918_2	926549.KI421517_gene646	1.114e-20	93.0	COG0457@1|root,COG0457@2|Bacteria,4NEV2@976|Bacteroidetes,47KT9@768503|Cytophagia	976|Bacteroidetes	S	Tetratricopeptide repeat	-	-	-	-	-	-	-	-	-	-	-	-	TPR_16,TPR_19,TPR_2,TPR_6,TPR_8
BYD3_k127_4916918_3	714943.Mucpa_2551	2.314e-05	47.0	2EIUI@1|root,33CJV@2|Bacteria,4NYR6@976|Bacteroidetes	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_4916918_0	1237149.C900_04526	4.853e-253	788.0	COG1530@1|root,COG1530@2|Bacteria,4NED1@976|Bacteroidetes,47KC6@768503|Cytophagia	976|Bacteroidetes	J	ribonuclease, Rne Rng family	rng	-	-	ko:K08301	-	-	-	-	ko00000,ko01000,ko03009,ko03019	-	-	-	RNase_E_G,S1
BYD3_k127_4916918_1	929703.KE386491_gene603	1.467e-173	552.0	COG1680@1|root,COG1680@2|Bacteria,4NHJN@976|Bacteroidetes,47JBV@768503|Cytophagia	976|Bacteroidetes	V	Beta-lactamase	-	-	-	-	-	-	-	-	-	-	-	-	Beta-lactamase
BYD3_k127_4937410_5	1408813.AYMG01000036_gene3292	7.169e-132	430.0	COG1008@1|root,COG1008@2|Bacteria,4NEJ1@976|Bacteroidetes,1IPJW@117747|Sphingobacteriia	976|Bacteroidetes	C	proton-translocating NADH-quinone oxidoreductase, chain M	-	-	1.6.5.3	ko:K00342	ko00190,ko01100,map00190,map01100	M00144	R11945	RC00061	ko00000,ko00001,ko00002,ko01000	3.D.1	-	-	Oxidored_q5_N,Proton_antipo_M
BYD3_k127_4937410_1	929556.Solca_3729	1.572e-233	738.0	COG1009@1|root,COG1009@2|Bacteria,4NEBM@976|Bacteroidetes,1IQ9D@117747|Sphingobacteriia	976|Bacteroidetes	CP	COG1009 NADH ubiquinone oxidoreductase subunit 5 (chain L) Multisubunit Na H antiporter MnhA subunit	nuoL	-	1.6.5.3	ko:K00341	ko00190,ko01100,map00190,map01100	M00144	R11945	RC00061	ko00000,ko00001,ko00002,ko01000	3.D.1	-	-	Proton_antipo_C,Proton_antipo_M,Proton_antipo_N
BYD3_k127_4937410_12	509635.N824_12910	1.686e-37	143.0	COG0713@1|root,COG0713@2|Bacteria,4NTBP@976|Bacteroidetes,1ITKQ@117747|Sphingobacteriia	976|Bacteroidetes	C	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient	nuoK	-	1.6.5.3	ko:K00340	ko00190,ko01100,map00190,map01100	M00144	R11945	RC00061	ko00000,ko00001,ko00002,ko01000	3.D.1	-	-	Oxidored_q2
BYD3_k127_4937410_11	926549.KI421517_gene1956	3.598e-50	183.0	COG0839@1|root,COG0839@2|Bacteria,4NP2V@976|Bacteroidetes,47PS7@768503|Cytophagia	976|Bacteroidetes	C	PFAM NADH-ubiquinone plastoquinone oxidoreductase chain 6	nuoJ	-	1.6.5.3	ko:K00339	ko00190,ko01100,map00190,map01100	M00144	R11945	RC00061	ko00000,ko00001,ko00002,ko01000	3.D.1	-	-	Oxidored_q3
BYD3_k127_4937410_7	755732.Fluta_1965	5.711e-78	264.0	COG1143@1|root,COG1143@2|Bacteria,4NI9I@976|Bacteroidetes,1I2F9@117743|Flavobacteriia	976|Bacteroidetes	C	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient	nuoI	-	1.6.5.3	ko:K00338	ko00190,ko01100,map00190,map01100	M00144	R11945	RC00061	ko00000,ko00001,ko00002,ko01000	3.D.1	-	-	Fer4
BYD3_k127_4937410_4	269798.CHU_1375	9.082e-159	507.0	COG1005@1|root,COG1005@2|Bacteria,4NGK7@976|Bacteroidetes,47K9J@768503|Cytophagia	976|Bacteroidetes	C	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone	nuoH	-	1.6.5.3	ko:K00337	ko00190,ko01100,map00190,map01100	M00144	R11945	RC00061	ko00000,ko00001,ko00002,ko01000	3.D.1	-	-	NADHdh
BYD3_k127_4937410_3	1356852.N008_05250	1.059e-165	526.0	COG1034@1|root,COG1034@2|Bacteria,4NH3P@976|Bacteroidetes,47K4R@768503|Cytophagia	976|Bacteroidetes	C	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region	nuoG	-	1.6.5.3	ko:K00336	ko00190,ko01100,map00190,map01100	M00144	R11945	RC00061	ko00000,ko00001,ko00002,ko01000	3.D.1	-	-	Fer2_4,NADH-G_4Fe-4S_3
BYD3_k127_4937410_0	1121373.KB903623_gene2360	4.999e-237	738.0	COG1894@1|root,COG1894@2|Bacteria,4NFB5@976|Bacteroidetes,47NNF@768503|Cytophagia	976|Bacteroidetes	C	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain	nuoF	-	1.12.1.3,1.6.5.3	ko:K00335,ko:K18331	ko00190,ko01100,map00190,map01100	M00144	R11945	RC00061	ko00000,ko00001,ko00002,ko01000	3.D.1	-	-	2Fe-2S_thioredx,Complex1_51K,Fer4,NADH_4Fe-4S,SLBB
BYD3_k127_4937410_8	153721.MYP_736	6.271e-71	243.0	COG1905@1|root,COG1905@2|Bacteria,4NHIQ@976|Bacteroidetes,47JBB@768503|Cytophagia	976|Bacteroidetes	C	TIGRFAM NADH-quinone oxidoreductase, E subunit	nuoE	-	1.6.5.3	ko:K00334	ko00190,ko01100,map00190,map01100	M00144	R11945	RC00061	ko00000,ko00001,ko00002,ko01000	3.D.1	-	-	2Fe-2S_thioredx
BYD3_k127_4937410_2	153721.MYP_737	5.676e-212	663.0	COG0649@1|root,COG0649@2|Bacteria,4NF02@976|Bacteroidetes,47KBK@768503|Cytophagia	976|Bacteroidetes	C	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient	nuoD	-	1.6.5.3	ko:K00333	ko00190,ko01100,map00190,map01100	M00144	R11945	RC00061	ko00000,ko00001,ko00002,ko01000	3.D.1	-	-	Complex1_49kDa
BYD3_k127_4937410_9	153721.MYP_738	9.61e-56	199.0	COG0852@1|root,COG0852@2|Bacteria,4NPZH@976|Bacteroidetes,47PAN@768503|Cytophagia	976|Bacteroidetes	C	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient	nuoC	-	1.6.5.3	ko:K00332	ko00190,ko01100,map00190,map01100	M00144	R11945	RC00061	ko00000,ko00001,ko00002,ko01000	3.D.1	-	-	Complex1_30kDa
BYD3_k127_4937410_6	1121373.KB903623_gene2364	4.001e-93	310.0	COG0377@1|root,COG0377@2|Bacteria,4NFKT@976|Bacteroidetes,47JYD@768503|Cytophagia	976|Bacteroidetes	C	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient	nuoB	-	1.6.5.3	ko:K00331	ko00190,ko01100,map00190,map01100	M00144	R11945	RC00061	ko00000,ko00001,ko00002,ko01000	3.D.1	-	-	Oxidored_q6
BYD3_k127_4937410_10	1434325.AZQN01000003_gene2099	4.139e-51	183.0	COG0838@1|root,COG0838@2|Bacteria,4NQJB@976|Bacteroidetes,47Q47@768503|Cytophagia	976|Bacteroidetes	C	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient	nuoA	-	1.6.5.3	ko:K00330	ko00190,ko01100,map00190,map01100	M00144	R11945	RC00061	ko00000,ko00001,ko00002,ko01000	3.D.1	-	-	Oxidored_q4
BYD3_k127_4937410_13	269798.CHU_2012	1.034e-18	89.0	COG0457@1|root,COG0457@2|Bacteria,4NIEU@976|Bacteroidetes,47XPU@768503|Cytophagia	976|Bacteroidetes	S	Tetratricopeptide repeat	-	-	-	-	-	-	-	-	-	-	-	-	TPR_16,TPR_19,TPR_2,TPR_8
BYD3_k127_4955669_1	1267533.KB906733_gene3447	3.801e-58	229.0	COG0457@1|root,COG5616@1|root,COG0457@2|Bacteria,COG5616@2|Bacteria	2|Bacteria	S	cAMP biosynthetic process	-	-	-	-	-	-	-	-	-	-	-	-	TPR_16,TPR_8
BYD3_k127_4955669_2	1122621.ATZA01000039_gene2636	3.332e-49	201.0	COG1418@1|root,COG1418@2|Bacteria,4NFAG@976|Bacteroidetes,1ISTR@117747|Sphingobacteriia	976|Bacteroidetes	S	Metal dependent phosphohydrolases with conserved 'HD' motif.	-	-	-	-	-	-	-	-	-	-	-	-	Guanylate_cyc,HD
BYD3_k127_4955669_0	468059.AUHA01000003_gene1834	5.488e-62	216.0	COG0457@1|root,COG2114@1|root,COG0457@2|Bacteria,COG2114@2|Bacteria,4NEVN@976|Bacteroidetes,1IS6A@117747|Sphingobacteriia	976|Bacteroidetes	T	PFAM Adenylate and Guanylate cyclase catalytic domain	-	-	-	-	-	-	-	-	-	-	-	-	Guanylate_cyc,Response_reg,TPR_12,TPR_8
BYD3_k127_495622_1	504472.Slin_3688	5.635e-147	481.0	COG1680@1|root,COG1680@2|Bacteria,4NEEP@976|Bacteroidetes,47KW2@768503|Cytophagia	976|Bacteroidetes	V	Beta-lactamase	-	-	-	-	-	-	-	-	-	-	-	-	Beta-lactamase
BYD3_k127_495622_6	865937.Gilli_2550	8.191e-05	48.0	COG0577@1|root,COG0577@2|Bacteria,4NIFV@976|Bacteroidetes,1HZ6N@117743|Flavobacteriia	976|Bacteroidetes	V	MacB-like periplasmic core domain	-	-	-	-	-	-	-	-	-	-	-	-	FtsX,MacB_PCD
BYD3_k127_495622_4	1123277.KB893228_gene2065	1.092e-29	121.0	COG1733@1|root,COG1733@2|Bacteria,4NTSK@976|Bacteroidetes,47XUP@768503|Cytophagia	976|Bacteroidetes	K	HxlR-like helix-turn-helix	-	-	-	-	-	-	-	-	-	-	-	-	HxlR
BYD3_k127_495622_2	153721.MYP_3327	2.622e-102	342.0	COG0702@1|root,COG0702@2|Bacteria,4NGMK@976|Bacteroidetes,47M3G@768503|Cytophagia	976|Bacteroidetes	GM	NmrA-like family	-	-	-	-	-	-	-	-	-	-	-	-	NAD_binding_10,NmrA
BYD3_k127_495622_0	1121904.ARBP01000004_gene1108	9.336e-247	785.0	COG0577@1|root,COG0577@2|Bacteria,4NDUK@976|Bacteroidetes,47JJN@768503|Cytophagia	976|Bacteroidetes	V	FtsX-like permease family	-	-	-	-	-	-	-	-	-	-	-	-	FtsX,MacB_PCD
BYD3_k127_495622_3	980584.AFPB01000174_gene1599	1.649e-37	144.0	COG0399@1|root,COG0399@2|Bacteria,4P2S3@976|Bacteroidetes,1I8T5@117743|Flavobacteriia,4074T@61432|unclassified Flavobacteriaceae	976|Bacteroidetes	M	23S rRNA-intervening sequence protein	-	-	-	-	-	-	-	-	-	-	-	-	23S_rRNA_IVP
BYD3_k127_495622_5	1346330.M472_18155	6.902e-18	90.0	COG5563@1|root,COG5563@2|Bacteria,4NMV9@976|Bacteroidetes,1ITYJ@117747|Sphingobacteriia	976|Bacteroidetes	N	domain, Protein	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_4979064_8	714943.Mucpa_4862	3.184e-45	171.0	COG5549@1|root,COG5549@2|Bacteria,4NEA0@976|Bacteroidetes,1IQA8@117747|Sphingobacteriia	976|Bacteroidetes	O	Domain of unknown function (DUF5118)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4953,DUF5117,DUF5118
BYD3_k127_4979064_5	1150600.ADIARSV_4130	1.751e-121	400.0	COG2706@1|root,COG2706@2|Bacteria,4NE87@976|Bacteroidetes,1INQI@117747|Sphingobacteriia	976|Bacteroidetes	G	3-carboxymuconate cyclase	-	-	3.1.1.31	ko:K07404	ko00030,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map01100,map01110,map01120,map01130,map01200	M00004,M00006,M00008	R02035	RC00537	ko00000,ko00001,ko00002,ko01000	-	-	-	Lactonase
BYD3_k127_4979064_6	1123248.KB893321_gene475	1.611e-74	259.0	COG2159@1|root,COG2159@2|Bacteria,4NH6P@976|Bacteroidetes	976|Bacteroidetes	S	Carbohydrate family 9 binding domain-like	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_4979064_0	700598.Niako_5906	5.545e-266	829.0	COG2010@1|root,COG2133@1|root,COG2010@2|Bacteria,COG2133@2|Bacteria,4NDV1@976|Bacteroidetes,1IQE3@117747|Sphingobacteriia	976|Bacteroidetes	G	sorbosone dehydrogenase	-	-	-	-	-	-	-	-	-	-	-	-	Cytochrome_CBB3,GSDH
BYD3_k127_4979064_3	641524.ADICYQ_1797	1.744e-159	512.0	COG3964@1|root,COG3964@2|Bacteria,4NI4W@976|Bacteroidetes,47U1T@768503|Cytophagia	976|Bacteroidetes	S	Amidohydrolase family	-	-	3.5.2.3	ko:K01465	ko00240,ko01100,map00240,map01100	M00051	R01993	RC00632	ko00000,ko00001,ko00002,ko01000	-	-	-	Amidohydro_1
BYD3_k127_4979064_2	1288963.ADIS_4405	1.006e-200	632.0	COG3964@1|root,COG3964@2|Bacteria,4NI4W@976|Bacteroidetes	976|Bacteroidetes	S	Pfam Amidohydrolase	-	-	3.5.2.3	ko:K01465	ko00240,ko01100,map00240,map01100	M00051	R01993	RC00632	ko00000,ko00001,ko00002,ko01000	-	-	-	Amidohydro_1,Amidohydro_3
BYD3_k127_4979064_1	1121481.AUAS01000004_gene1503	6.662e-238	745.0	COG0520@1|root,COG0520@2|Bacteria,4NI5J@976|Bacteroidetes,47NW7@768503|Cytophagia	976|Bacteroidetes	E	Cys/Met metabolism PLP-dependent enzyme	-	-	-	-	-	-	-	-	-	-	-	-	Aminotran_5
BYD3_k127_4979064_7	1239962.C943_03733	1.503e-60	229.0	COG0457@1|root,COG5616@1|root,COG0457@2|Bacteria,COG5616@2|Bacteria,4P3P6@976|Bacteroidetes	976|Bacteroidetes	S	Tetratricopeptide repeat	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_4979064_4	644966.Tmar_0394	4.013e-129	420.0	COG0318@1|root,COG0318@2|Bacteria,1TPSX@1239|Firmicutes,248QX@186801|Clostridia	186801|Clostridia	IQ	Acyl-CoA synthetase (AMP-forming) AMP-acid ligase II	-	-	-	ko:K00666	-	-	-	-	ko00000,ko01000,ko01004	-	-	-	AMP-binding,AMP-binding_C
BYD3_k127_5032341_4	1394178.AWOO02000014_gene7761	2.193e-21	104.0	COG1132@1|root,COG1132@2|Bacteria,2GJYK@201174|Actinobacteria,4EFQ3@85012|Streptosporangiales	201174|Actinobacteria	V	ATPases associated with a variety of cellular activities	-	-	-	-	-	-	-	-	-	-	-	-	ABC_tran
BYD3_k127_5032341_0	641524.ADICYQ_4013	2.508e-171	546.0	COG3693@1|root,COG3693@2|Bacteria,4NE5Z@976|Bacteroidetes,47Q9Y@768503|Cytophagia	976|Bacteroidetes	G	Glycosyl hydrolase family 10	xynT	-	3.2.1.8	ko:K01181	-	-	-	-	ko00000,ko01000	-	-	-	CBM_4_9,Glyco_hydro_10
BYD3_k127_5032341_3	266748.HY04_01170	1.7e-21	100.0	COG4731@1|root,COG4731@2|Bacteria,4PGNX@976|Bacteroidetes,1ICCH@117743|Flavobacteriia,3ZSYV@59732|Chryseobacterium	976|Bacteroidetes	S	Uncharacterized protein conserved in bacteria (DUF2147)	-	-	-	-	-	-	-	-	-	-	-	-	DUF2147
BYD3_k127_5032341_2	234267.Acid_4777	1.53e-24	108.0	COG0642@1|root,COG0745@1|root,COG3292@1|root,COG0745@2|Bacteria,COG2205@2|Bacteria,COG3292@2|Bacteria,3Y2ZI@57723|Acidobacteria	57723|Acidobacteria	T	Two component regulator propeller	-	-	-	-	-	-	-	-	-	-	-	-	HATPase_c,HisKA_3,Reg_prop,Y_Y_Y
BYD3_k127_5046307_5	643867.Ftrac_0011	6.712e-67	232.0	COG2050@1|root,COG2050@2|Bacteria,4P2ZC@976|Bacteroidetes	976|Bacteroidetes	Q	Domain of unknown function (DUF4442)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4442
BYD3_k127_5046307_4	1237149.C900_00281	3.487e-83	297.0	COG0457@1|root,COG0457@2|Bacteria,4NGS0@976|Bacteroidetes,47MD8@768503|Cytophagia	976|Bacteroidetes	K	Tetratricopeptide repeat	-	-	-	-	-	-	-	-	-	-	-	-	TPR_12,TPR_8
BYD3_k127_5046307_6	1156937.MFUM_150002	4.112e-33	132.0	COG1017@1|root,COG1017@2|Bacteria,46SYH@74201|Verrucomicrobia	74201|Verrucomicrobia	C	Globin	-	-	-	-	-	-	-	-	-	-	-	-	Globin
BYD3_k127_5046307_1	1121904.ARBP01000005_gene4880	1.769e-163	521.0	COG1748@1|root,COG1748@2|Bacteria,4NFM8@976|Bacteroidetes	976|Bacteroidetes	E	Saccharopine dehydrogenase	-	-	-	-	-	-	-	-	-	-	-	-	Sacchrp_dh_C,Sacchrp_dh_NADP
BYD3_k127_5046307_0	1286632.P278_04000	5.878e-236	745.0	COG4805@1|root,COG4805@2|Bacteria,4NFAK@976|Bacteroidetes,1HXAT@117743|Flavobacteriia	976|Bacteroidetes	S	protein conserved in bacteria	-	-	-	-	-	-	-	-	-	-	-	-	DUF885
BYD3_k127_5046307_2	153721.MYP_1733	1.75e-95	329.0	COG4251@1|root,COG4251@2|Bacteria,4NFC3@976|Bacteroidetes,47JSC@768503|Cytophagia	976|Bacteroidetes	T	His Kinase A (phosphoacceptor) domain	-	-	-	-	-	-	-	-	-	-	-	-	GAF,HATPase_c,HisKA,PAS_10,PAS_3,PAS_4,PAS_9
BYD3_k127_5046307_3	643867.Ftrac_0613	9.392e-94	323.0	COG2203@1|root,COG2203@2|Bacteria	2|Bacteria	T	Gaf domain	-	-	-	-	-	-	-	-	-	-	-	-	4HB_MCP_1,GAF_2,HATPase_c,HisKA,PAS_9,Response_reg
BYD3_k127_5048936_2	504472.Slin_3963	3.692e-73	254.0	COG2159@1|root,COG2159@2|Bacteria,4NH6P@976|Bacteroidetes,47M0D@768503|Cytophagia	976|Bacteroidetes	S	Carbohydrate family 9 binding domain-like	-	-	-	-	-	-	-	-	-	-	-	-	CBM9_1
BYD3_k127_5048936_0	1191523.MROS_2496	0.0	1031.0	COG3661@1|root,COG3661@2|Bacteria	2|Bacteria	G	alpha-glucuronidase activity	aguA	GO:0000272,GO:0003674,GO:0003824,GO:0004553,GO:0005975,GO:0005976,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009987,GO:0010383,GO:0010410,GO:0010413,GO:0016052,GO:0016787,GO:0016798,GO:0033939,GO:0043170,GO:0044036,GO:0044237,GO:0044238,GO:0044260,GO:0045491,GO:0045493,GO:0071554,GO:0071704,GO:1901575,GO:2000886	3.2.1.139	ko:K01235	-	-	-	-	ko00000,ko01000	-	-	-	Glyco_hydro_67C,Glyco_hydro_67M,Glyco_hydro_67N
BYD3_k127_5048936_1	1267534.KB906756_gene343	2.023e-200	632.0	COG0412@1|root,COG0412@2|Bacteria,3Y2PZ@57723|Acidobacteria,2JKJA@204432|Acidobacteriia	204432|Acidobacteriia	Q	Dienelactone hydrolase	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_5050230_3	1237149.C900_02777	3.447e-49	180.0	COG0697@1|root,COG0697@2|Bacteria,4NEHX@976|Bacteroidetes,47MRR@768503|Cytophagia	976|Bacteroidetes	EG	PFAM EamA-like transporter family	fjo11	-	-	-	-	-	-	-	-	-	-	-	EamA
BYD3_k127_5050230_2	1408473.JHXO01000011_gene3096	1.087e-65	233.0	COG3568@1|root,COG3568@2|Bacteria,4NHXV@976|Bacteroidetes,2FNR3@200643|Bacteroidia	976|Bacteroidetes	S	Endonuclease exonuclease phosphatase family	-	-	-	-	-	-	-	-	-	-	-	-	Exo_endo_phos
BYD3_k127_5050230_1	1237149.C900_04491	0.0	1035.0	COG2866@1|root,COG2866@2|Bacteria,4NEJA@976|Bacteroidetes,47KZ0@768503|Cytophagia	976|Bacteroidetes	E	PFAM Zinc carboxypeptidase	-	-	-	-	-	-	-	-	-	-	-	-	Peptidase_M14
BYD3_k127_5050230_0	1356852.N008_04050	0.0	1150.0	COG1629@1|root,COG4771@2|Bacteria,4NF66@976|Bacteroidetes,47JMC@768503|Cytophagia	976|Bacteroidetes	P	Carboxypeptidase regulatory-like domain	-	-	-	-	-	-	-	-	-	-	-	-	CarboxypepD_reg,Plug,TonB_dep_Rec
BYD3_k127_5067713_1	886379.AEWI01000047_gene3087	3.74e-74	269.0	COG0457@1|root,COG2849@1|root,COG0457@2|Bacteria,COG2849@2|Bacteria,4NP5N@976|Bacteroidetes,2FS0W@200643|Bacteroidia	976|Bacteroidetes	S	TPR repeat	-	-	-	-	-	-	-	-	-	-	-	-	TPR_1,TPR_11,TPR_16,TPR_2,TPR_8
BYD3_k127_5067713_0	1279009.ADICEAN_04037	1.065e-155	496.0	COG2876@1|root,COG2876@2|Bacteria,4NDU4@976|Bacteroidetes,47K32@768503|Cytophagia	976|Bacteroidetes	E	chorismate mutase	pheB	-	5.4.99.5	ko:K04516	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	M00024,M00025	R01715	RC03116	ko00000,ko00001,ko00002,ko01000	-	-	-	CM_2,DAHP_synth_1
BYD3_k127_5081640_5	1237149.C900_03228	7.325e-34	130.0	COG1505@1|root,COG1505@2|Bacteria,4NFJS@976|Bacteroidetes,47JBG@768503|Cytophagia	976|Bacteroidetes	E	PFAM Prolyl oligopeptidase, N-terminal beta-propeller domain	pep	GO:0005575,GO:0005623,GO:0042597,GO:0044464	3.4.21.26	ko:K01322	ko04614,map04614	-	-	-	ko00000,ko00001,ko01000,ko01002	-	-	-	Peptidase_S9,Peptidase_S9_N
BYD3_k127_5081640_6	1237149.C900_00555	6.002e-32	130.0	COG2197@1|root,COG2197@2|Bacteria,4NQSY@976|Bacteroidetes,47QHW@768503|Cytophagia	976|Bacteroidetes	KT	helix_turn_helix, Lux Regulon	-	-	-	-	-	-	-	-	-	-	-	-	GerE
BYD3_k127_5081640_4	1237149.C900_00554	2.104e-41	158.0	2CB8S@1|root,30PE6@2|Bacteria,4NU1E@976|Bacteroidetes,47RMQ@768503|Cytophagia	976|Bacteroidetes	S	Protein of unknown function (DUF4199)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4199
BYD3_k127_5081640_0	1121904.ARBP01000002_gene7293	4.554e-244	778.0	COG0577@1|root,COG0577@2|Bacteria,4NDUK@976|Bacteroidetes,47JJN@768503|Cytophagia	976|Bacteroidetes	V	FtsX-like permease family	-	-	-	ko:K02004	-	M00258	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	FtsX,MacB_PCD
BYD3_k127_5081640_1	1279009.ADICEAN_01013	9.158e-203	645.0	2DBA6@1|root,2Z814@2|Bacteria,4NFI6@976|Bacteroidetes,47MPW@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_5081640_2	1279009.ADICEAN_01012	2.175e-163	522.0	28JQV@1|root,2Z7R2@2|Bacteria,4NJF2@976|Bacteroidetes,47KDX@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_5081640_3	926562.Oweho_1605	2.929e-77	279.0	COG2202@1|root,COG4251@1|root,COG2202@2|Bacteria,COG4251@2|Bacteria,4NFC3@976|Bacteroidetes,1HWUK@117743|Flavobacteriia	976|Bacteroidetes	T	Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase	-	-	-	-	-	-	-	-	-	-	-	-	HATPase_c,PAS,PAS_3,PAS_4,PAS_9
BYD3_k127_5083056_1	1121890.AUDO01000008_gene2734	1.787e-26	110.0	COG2334@1|root,COG2334@2|Bacteria,4NGVS@976|Bacteroidetes,1HYWD@117743|Flavobacteriia,2NT8Q@237|Flavobacterium	976|Bacteroidetes	S	Phosphotransferase enzyme family	-	-	-	-	-	-	-	-	-	-	-	-	APH
BYD3_k127_5083056_3	1356852.N008_17600	1.454e-12	78.0	COG2849@1|root,COG2849@2|Bacteria	2|Bacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	MORN_2,TonB_C
BYD3_k127_5083056_0	1123248.KB893386_gene1814	7.793e-92	305.0	COG0165@1|root,COG0165@2|Bacteria,4NFCY@976|Bacteroidetes,1INUE@117747|Sphingobacteriia	976|Bacteroidetes	E	argininosuccinate lyase	argH	GO:0003674,GO:0003824,GO:0004056,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006591,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016829,GO:0016840,GO:0016842,GO:0019752,GO:0042450,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607	4.3.2.1	ko:K01755	ko00220,ko00250,ko01100,ko01110,ko01130,ko01230,map00220,map00250,map01100,map01110,map01130,map01230	M00029,M00844,M00845	R01086	RC00445,RC00447	ko00000,ko00001,ko00002,ko01000,ko04147	-	-	-	Lyase_1
BYD3_k127_5092428_11	743722.Sph21_1601	9.24e-54	196.0	COG0586@1|root,COG0586@2|Bacteria,4NMBP@976|Bacteroidetes,1IRXI@117747|Sphingobacteriia	976|Bacteroidetes	S	PFAM SNARE associated Golgi protein	-	-	-	ko:K03975	-	-	-	-	ko00000	-	-	-	SNARE_assoc
BYD3_k127_5092428_1	1408813.AYMG01000023_gene1995	1.017e-287	903.0	COG1629@1|root,COG4771@2|Bacteria,4PKE0@976|Bacteroidetes,1IRNN@117747|Sphingobacteriia	976|Bacteroidetes	P	COGs COG1629 Outer membrane receptor protein mostly Fe transport	-	-	-	ko:K02014	-	-	-	-	ko00000,ko02000	1.B.14	-	-	CarbopepD_reg_2,Plug,TonB_dep_Rec
BYD3_k127_5092428_14	655815.ZPR_1891	2.948e-22	102.0	COG0784@1|root,COG0784@2|Bacteria,4NUT5@976|Bacteroidetes,1I463@117743|Flavobacteriia	976|Bacteroidetes	T	response regulator, receiver	-	-	-	-	-	-	-	-	-	-	-	-	Response_reg
BYD3_k127_5092428_3	1237149.C900_02651	1.953e-212	679.0	COG0457@1|root,COG0823@1|root,COG2885@1|root,COG0457@2|Bacteria,COG0823@2|Bacteria,COG2885@2|Bacteria,4NHCE@976|Bacteroidetes,47X9U@768503|Cytophagia	976|Bacteroidetes	MU	OmpA family	-	-	-	-	-	-	-	-	-	-	-	-	OmpA,PD40,TPR_11,TPR_16
BYD3_k127_5092428_2	926556.Echvi_1083	2.827e-244	765.0	COG3653@1|root,COG3653@2|Bacteria,4NHDD@976|Bacteroidetes,47KC3@768503|Cytophagia	976|Bacteroidetes	Q	PFAM D-aminoacylase, C-terminal region	-	-	3.5.1.81	ko:K06015	-	-	R02192	RC00064,RC00328	ko00000,ko01000	-	-	-	Amidohydro_3
BYD3_k127_5092428_4	1120965.AUBV01000005_gene1661	6.009e-192	613.0	COG3653@1|root,COG3653@2|Bacteria,4NHDD@976|Bacteroidetes,47KC3@768503|Cytophagia	976|Bacteroidetes	Q	PFAM D-aminoacylase, C-terminal region	-	-	3.5.1.81	ko:K06015	-	-	R02192	RC00064,RC00328	ko00000,ko01000	-	-	-	Amidohydro_3
BYD3_k127_5092428_9	1279009.ADICEAN_01376	4.097e-79	271.0	COG0500@1|root,COG2226@2|Bacteria,4NG68@976|Bacteroidetes,47NYV@768503|Cytophagia	976|Bacteroidetes	Q	Methyltransferase domain	-	-	-	-	-	-	-	-	-	-	-	-	Methyltransf_11
BYD3_k127_5092428_7	313606.M23134_00570	1.965e-97	324.0	COG0010@1|root,COG0010@2|Bacteria,4NHDP@976|Bacteroidetes,47UNV@768503|Cytophagia	976|Bacteroidetes	E	Arginase family	-	-	-	-	-	-	-	-	-	-	-	-	Arginase
BYD3_k127_5092428_6	1303518.CCALI_02909	2.099e-103	346.0	COG1073@1|root,COG1073@2|Bacteria	2|Bacteria	S	thiolester hydrolase activity	ytaP	-	-	-	-	-	-	-	-	-	-	-	AXE1,Abhydrolase_7,DLH,Peptidase_S15,Peptidase_S9
BYD3_k127_5092428_0	1239962.C943_03690	2.325e-307	951.0	COG0173@1|root,COG0173@2|Bacteria,4NECY@976|Bacteroidetes,47JC8@768503|Cytophagia	976|Bacteroidetes	J	Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp)	aspS	-	6.1.1.12	ko:K01876	ko00970,map00970	M00359,M00360	R05577	RC00055,RC00523	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029	-	-	-	GAD,tRNA-synt_2,tRNA_anti-codon
BYD3_k127_5092428_12	1237149.C900_00723	3.903e-50	184.0	2E7DW@1|root,331WY@2|Bacteria,4NUZQ@976|Bacteroidetes,47RNZ@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_5092428_10	866536.Belba_1495	8.463e-59	207.0	COG0590@1|root,COG0590@2|Bacteria,4NNJ2@976|Bacteroidetes,47PPY@768503|Cytophagia	976|Bacteroidetes	FJ	Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2)	tadA	-	3.5.4.33	ko:K11991	-	-	R10223	RC00477	ko00000,ko01000,ko03016	-	-	-	MafB19-deam,dCMP_cyt_deam_1
BYD3_k127_5092428_13	269798.CHU_3583	1.497e-40	152.0	2DMPT@1|root,32SXV@2|Bacteria,4PKGT@976|Bacteroidetes,47R1K@768503|Cytophagia	976|Bacteroidetes	S	Domain of unknown function (DUF3127)	-	-	-	-	-	-	-	-	-	-	-	-	DUF3127
BYD3_k127_5092428_8	743722.Sph21_1066	3.964e-80	269.0	COG0605@1|root,COG0605@2|Bacteria,4NDZ4@976|Bacteroidetes,1IQF9@117747|Sphingobacteriia	976|Bacteroidetes	P	Destroys radicals which are normally produced within the cells and which are toxic to biological systems	sodA	-	1.15.1.1	ko:K04564	ko04013,ko04068,ko04146,ko04211,ko04212,ko04213,ko05016,map04013,map04068,map04146,map04211,map04212,map04213,map05016	-	-	-	ko00000,ko00001,ko01000	-	-	-	Sod_Fe_C,Sod_Fe_N
BYD3_k127_5092428_16	641524.ADICYQ_4780	6.381e-13	68.0	COG0605@1|root,COG0605@2|Bacteria,4NDZ4@976|Bacteroidetes,47JJV@768503|Cytophagia	976|Bacteroidetes	P	Destroys radicals which are normally produced within the cells and which are toxic to biological systems	sodA	-	1.15.1.1	ko:K04564	ko04013,ko04068,ko04146,ko04211,ko04212,ko04213,ko05016,map04013,map04068,map04146,map04211,map04212,map04213,map05016	-	-	-	ko00000,ko00001,ko01000	-	-	-	Sod_Fe_C,Sod_Fe_N
BYD3_k127_5092428_15	1288963.ADIS_2683	4.523e-21	98.0	2F6K2@1|root,33Z2Y@2|Bacteria,4P4F1@976|Bacteroidetes,47VH0@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_5092428_5	468059.AUHA01000006_gene2865	3.464e-180	572.0	COG0513@1|root,COG0513@2|Bacteria,4NEVI@976|Bacteroidetes,1INY6@117747|Sphingobacteriia	976|Bacteroidetes	L	Belongs to the DEAD box helicase family	rhlE	-	3.6.4.13	ko:K11927	ko03018,map03018	-	-	-	ko00000,ko00001,ko01000,ko03019	-	-	-	DEAD,Helicase_C
BYD3_k127_5123030_6	1122179.KB890427_gene3888	1.707e-39	151.0	COG0262@1|root,COG0262@2|Bacteria,4NM92@976|Bacteroidetes	976|Bacteroidetes	H	RibD C-terminal domain	-	-	-	-	-	-	-	-	-	-	-	-	RibD_C
BYD3_k127_5123030_2	760192.Halhy_0201	8.451e-128	412.0	COG2133@1|root,COG2133@2|Bacteria,4NK4E@976|Bacteroidetes	976|Bacteroidetes	G	Domain of Unknown Function (DUF1080)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1080
BYD3_k127_5123030_5	553177.CAPSP0001_0972	1.759e-68	243.0	COG1376@1|root,COG1376@2|Bacteria,4NNX7@976|Bacteroidetes,1I2D3@117743|Flavobacteriia,1ERGZ@1016|Capnocytophaga	976|Bacteroidetes	S	L,D-transpeptidase catalytic domain	-	-	-	-	-	-	-	-	-	-	-	-	YkuD_2
BYD3_k127_5123030_3	926551.KB900709_gene1111	7.795e-96	337.0	COG2989@1|root,COG2989@2|Bacteria,4NH3J@976|Bacteroidetes,1I08J@117743|Flavobacteriia,1EQ7S@1016|Capnocytophaga	976|Bacteroidetes	S	peptidoglycan binding domain protein	-	-	-	ko:K21470	-	-	-	-	ko00000,ko01002,ko01011	-	-	-	PG_binding_1,YkuD
BYD3_k127_5123030_1	1288963.ADIS_1840	1.848e-157	510.0	COG1387@1|root,COG1387@2|Bacteria,4NHYE@976|Bacteroidetes,47YBS@768503|Cytophagia	976|Bacteroidetes	E	Histidinol phosphatase and related hydrolases of the PHP family	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_5123030_0	1123248.KB893381_gene966	1.21e-201	632.0	COG0673@1|root,COG0673@2|Bacteria,4NEC6@976|Bacteroidetes,1IR4X@117747|Sphingobacteriia	976|Bacteroidetes	S	Oxidoreductase	-	-	-	-	-	-	-	-	-	-	-	-	GFO_IDH_MocA
BYD3_k127_5123030_4	1189612.A33Q_0062	5.603e-87	293.0	COG1082@1|root,COG1082@2|Bacteria,4NEUS@976|Bacteroidetes,47NHQ@768503|Cytophagia	976|Bacteroidetes	G	PFAM Xylose isomerase	-	-	-	-	-	-	-	-	-	-	-	-	AP_endonuc_2
BYD3_k127_5133852_6	525257.HMPREF0204_13410	1.961e-23	103.0	2E49F@1|root,32Z57@2|Bacteria,4PKEJ@976|Bacteroidetes,1IJCW@117743|Flavobacteriia,3ZUR5@59732|Chryseobacterium	976|Bacteroidetes	S	Domain of unknown function (DUF4180)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4180
BYD3_k127_5133852_0	1185876.BN8_06488	6.536e-183	578.0	COG0673@1|root,COG0673@2|Bacteria,4NENY@976|Bacteroidetes	976|Bacteroidetes	S	Oxidoreductase family, NAD-binding Rossmann fold	-	-	-	-	-	-	-	-	-	-	-	-	GFO_IDH_MocA
BYD3_k127_5133852_3	1434325.AZQN01000006_gene3402	3.228e-140	457.0	COG1524@1|root,COG1524@2|Bacteria,4NFRQ@976|Bacteroidetes,47JI2@768503|Cytophagia	976|Bacteroidetes	S	PFAM type I phosphodiesterase nucleotide pyrophosphatase	-	-	-	-	-	-	-	-	-	-	-	-	Phosphodiest
BYD3_k127_5133852_5	309807.SRU_2861	1.088e-53	202.0	COG3568@1|root,COG3568@2|Bacteria,4PM6V@976|Bacteroidetes	976|Bacteroidetes	L	Endonuclease/Exonuclease/phosphatase family	-	-	-	-	-	-	-	-	-	-	-	-	Exo_endo_phos
BYD3_k127_5133852_4	1286632.P278_10570	1.387e-56	208.0	2A5V5@1|root,30UKY@2|Bacteria,4NPBN@976|Bacteroidetes,1I2Q6@117743|Flavobacteriia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_5133852_2	1048983.EL17_18370	6.892e-160	517.0	COG0521@1|root,COG0521@2|Bacteria,4NG3I@976|Bacteroidetes,47JEA@768503|Cytophagia	976|Bacteroidetes	H	Starch-binding associating with outer membrane	-	-	-	-	-	-	-	-	-	-	-	-	SusD-like_2
BYD3_k127_5133852_1	1286632.P278_10550	1.742e-172	550.0	COG4206@1|root,COG4206@2|Bacteria,4NZWU@976|Bacteroidetes,1I86Y@117743|Flavobacteriia	976|Bacteroidetes	H	TonB-linked outer membrane protein, SusC RagA family	-	-	-	-	-	-	-	-	-	-	-	-	CarbopepD_reg_2,Plug,STN,TonB_dep_Rec
BYD3_k127_5139194_2	1121481.AUAS01000017_gene2494	2.32e-73	254.0	COG0577@1|root,COG0577@2|Bacteria,4NDUK@976|Bacteroidetes,47MUE@768503|Cytophagia	976|Bacteroidetes	V	MacB-like periplasmic core domain	-	-	-	ko:K02004	-	M00258	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	FtsX,MacB_PCD
BYD3_k127_5139194_0	471854.Dfer_3298	1.667e-300	929.0	COG3507@1|root,COG3507@2|Bacteria,4NEMG@976|Bacteroidetes,47KCN@768503|Cytophagia	976|Bacteroidetes	G	PFAM coagulation factor 5 8 type	-	-	-	-	-	-	-	-	-	-	-	-	F5_F8_type_C,Glyco_hydro_43
BYD3_k127_5139194_1	468059.AUHA01000005_gene2617	2.545e-161	520.0	COG1570@1|root,COG1570@2|Bacteria,4NE64@976|Bacteroidetes,1IRPR@117747|Sphingobacteriia	976|Bacteroidetes	L	Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides	xseA	-	3.1.11.6	ko:K03601	ko03430,map03430	-	-	-	ko00000,ko00001,ko01000,ko03400	-	-	-	Exonuc_VII_L,tRNA_anti_2
BYD3_k127_5139194_4	153721.MYP_1779	8.495e-22	96.0	COG1722@1|root,COG1722@2|Bacteria	2|Bacteria	L	exodeoxyribonuclease VII activity	xseB	-	3.1.11.6	ko:K03602	ko03430,map03430	-	-	-	ko00000,ko00001,ko01000,ko03400	-	-	-	Exonuc_VII_S
BYD3_k127_5139194_3	929556.Solca_0358	2.522e-43	169.0	COG1752@1|root,COG4775@1|root,COG1752@2|Bacteria,COG4775@2|Bacteria,4NDXY@976|Bacteroidetes,1IP0S@117747|Sphingobacteriia	976|Bacteroidetes	M	Patatin-like phospholipase	-	-	-	ko:K07001	-	-	-	-	ko00000	-	-	-	Bac_surface_Ag,POTRA,Patatin
BYD3_k127_5145411_3	1237149.C900_00340	7.611e-06	51.0	COG1216@1|root,COG1216@2|Bacteria,4NJWR@976|Bacteroidetes,47P3Y@768503|Cytophagia	976|Bacteroidetes	S	Glycosyl transferase family 2	-	-	-	-	-	-	-	-	-	-	-	-	Glycos_transf_2
BYD3_k127_5145411_2	1237149.C900_00516	4.946e-52	190.0	COG1011@1|root,COG1011@2|Bacteria,4NQT8@976|Bacteroidetes,47QH7@768503|Cytophagia	976|Bacteroidetes	S	TIGRFAM haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED	yihX	-	3.1.3.10	ko:K20866	ko00010,ko01120,map00010,map01120	-	R00947	RC00078	ko00000,ko00001,ko01000	-	-	-	HAD_2
BYD3_k127_5145411_1	1237149.C900_00515	1.563e-128	420.0	COG0750@1|root,COG0750@2|Bacteria,4NI5C@976|Bacteroidetes,47K57@768503|Cytophagia	976|Bacteroidetes	M	Peptidase family M50	-	-	-	-	-	-	-	-	-	-	-	-	Peptidase_M50
BYD3_k127_5145411_0	1120968.AUBX01000009_gene242	1.944e-157	502.0	COG4770@1|root,COG4770@2|Bacteria,4NM1W@976|Bacteroidetes,47M7U@768503|Cytophagia	976|Bacteroidetes	I	PFAM Carbamoyl-phosphate synthase L chain, ATP binding	-	-	6.3.4.14,6.4.1.2,6.4.1.3	ko:K01961,ko:K01965	ko00061,ko00280,ko00620,ko00630,ko00640,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00061,map00280,map00620,map00630,map00640,map00720,map01100,map01110,map01120,map01130,map01200,map01212	M00082,M00373,M00376,M00741	R00742,R01859,R04385	RC00040,RC00097,RC00253,RC00367,RC00609	ko00000,ko00001,ko00002,ko01000	-	-	-	Biotin_carb_C,Biotin_carb_N,CPSase_L_D2
BYD3_k127_5152004_2	1237149.C900_03653	3.581e-67	232.0	COG0346@1|root,COG0346@2|Bacteria,4NQCJ@976|Bacteroidetes,47QR5@768503|Cytophagia	976|Bacteroidetes	E	PFAM Glyoxalase bleomycin resistance protein dioxygenase	-	-	-	-	-	-	-	-	-	-	-	-	Glyoxalase
BYD3_k127_5152004_3	509635.N824_28240	3.298e-47	173.0	COG2207@1|root,COG2207@2|Bacteria,4NPKU@976|Bacteroidetes,1IU6U@117747|Sphingobacteriia	976|Bacteroidetes	K	helix_turn_helix, arabinose operon control protein	-	-	-	-	-	-	-	-	-	-	-	-	HTH_18,HTH_AraC
BYD3_k127_5152004_0	926549.KI421517_gene1975	6.047e-185	587.0	COG2223@1|root,COG2223@2|Bacteria,4NETE@976|Bacteroidetes,47MEV@768503|Cytophagia	976|Bacteroidetes	P	Major Facilitator Superfamily	-	-	-	ko:K02575	ko00910,map00910	M00615	-	-	ko00000,ko00001,ko00002,ko02000	2.A.1.8	-	-	MFS_1
BYD3_k127_5152004_1	926549.KI421517_gene1981	2.294e-155	503.0	COG3203@1|root,COG3203@2|Bacteria,4NDYW@976|Bacteroidetes,47JMP@768503|Cytophagia	976|Bacteroidetes	M	Alginate export	-	-	-	-	-	-	-	-	-	-	-	-	Alginate_exp
BYD3_k127_5159777_3	1345697.M493_08925	5.495e-51	184.0	COG0520@1|root,COG0520@2|Bacteria,1TQWE@1239|Firmicutes,4HCHU@91061|Bacilli,1WEDX@129337|Geobacillus	91061|Bacilli	E	Aminotransferase class-V	-	-	-	-	-	-	-	-	-	-	-	-	Aminotran_5
BYD3_k127_5159777_1	694427.Palpr_1347	2.297e-69	241.0	2AINN@1|root,31954@2|Bacteria,4P6MS@976|Bacteroidetes	976|Bacteroidetes	S	Domain of unknown function (DUF4395)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4395
BYD3_k127_5159777_5	700598.Niako_0643	4.736e-43	171.0	COG2972@1|root,COG2972@2|Bacteria,4NIRC@976|Bacteroidetes,1J05H@117747|Sphingobacteriia	976|Bacteroidetes	T	Signal transduction histidine kinase, LytS	-	-	-	-	-	-	-	-	-	-	-	-	HATPase_c_5,His_kinase
BYD3_k127_5159777_2	643867.Ftrac_0445	5.632e-63	224.0	COG3279@1|root,COG3279@2|Bacteria,4NNIK@976|Bacteroidetes,47XDY@768503|Cytophagia	976|Bacteroidetes	K	LytTr DNA-binding domain	-	-	-	-	-	-	-	-	-	-	-	-	LytTR,Response_reg
BYD3_k127_5159777_0	1380355.JNIJ01000021_gene3703	8.944e-287	891.0	COG3119@1|root,COG3119@2|Bacteria,1MUJH@1224|Proteobacteria,2TSB8@28211|Alphaproteobacteria,3JSJ1@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	Sulfatase	-	-	3.1.6.1	ko:K01130	ko00140,ko00600,map00140,map00600	-	R03980,R04856	RC00128,RC00231	ko00000,ko00001,ko01000	-	-	-	DUF4994,Sulfatase
BYD3_k127_5159777_4	1107311.Q767_15090	3.786e-44	166.0	COG0560@1|root,COG0560@2|Bacteria,4NIF2@976|Bacteroidetes,1HZ6P@117743|Flavobacteriia,2NT55@237|Flavobacterium	976|Bacteroidetes	E	haloacid dehalogenase-like hydrolase	-	-	-	-	-	-	-	-	-	-	-	-	HAD
BYD3_k127_5164669_4	1124780.ANNU01000016_gene1821	1.37e-48	186.0	COG0729@1|root,COG0729@2|Bacteria,4NMUN@976|Bacteroidetes,47Y2C@768503|Cytophagia	976|Bacteroidetes	M	Surface antigen	-	-	-	-	-	-	-	-	-	-	-	-	Bac_surface_Ag
BYD3_k127_5164669_0	468059.AUHA01000003_gene1460	6.426e-189	601.0	COG1301@1|root,COG1301@2|Bacteria,4NDUU@976|Bacteroidetes,1INWV@117747|Sphingobacteriia	976|Bacteroidetes	C	Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family	gltP	-	-	ko:K11102	-	-	-	-	ko00000,ko02000	2.A.23.1.1,2.A.23.1.2	-	-	SDF
BYD3_k127_5164669_3	388413.ALPR1_04040	5.875e-75	256.0	COG0694@1|root,COG0694@2|Bacteria,4NG0Q@976|Bacteroidetes,47PV2@768503|Cytophagia	976|Bacteroidetes	O	PFAM Scaffold protein Nfu NifU N terminal	-	-	-	-	-	-	-	-	-	-	-	-	Nfu_N,NifU
BYD3_k127_5164669_2	1123248.KB893317_gene4295	3.438e-132	443.0	COG4775@1|root,COG4775@2|Bacteria,4NF38@976|Bacteroidetes,1IV5H@117747|Sphingobacteriia	976|Bacteroidetes	M	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_5164669_1	925409.KI911562_gene307	7.312e-138	444.0	COG0069@1|root,COG0069@2|Bacteria,4NFKH@976|Bacteroidetes,1IREF@117747|Sphingobacteriia	976|Bacteroidetes	E	Belongs to the glutamate synthase family	glt	-	-	-	-	-	-	-	-	-	-	-	Glu_synthase
BYD3_k127_5184441_6	313606.M23134_01983	1.22e-22	100.0	COG1387@1|root,COG1387@2|Bacteria,4NIJU@976|Bacteroidetes,47Q20@768503|Cytophagia	976|Bacteroidetes	E	PHP domain	-	-	3.1.3.15	ko:K04486	ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230	M00026	R03013	RC00017	ko00000,ko00001,ko00002,ko01000	-	-	-	PHP
BYD3_k127_5184441_2	468059.AUHA01000002_gene384	1.876e-134	442.0	2C31A@1|root,2Z7UP@2|Bacteria,4NECU@976|Bacteroidetes,1IQU7@117747|Sphingobacteriia	976|Bacteroidetes	S	Psort location CytoplasmicMembrane, score 10.00	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_5184441_8	1166018.FAES_0416	2.044e-05	53.0	2E9CR@1|root,33N5N@2|Bacteria,4NZPI@976|Bacteroidetes,47T3I@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_5184441_5	471854.Dfer_3095	5.978e-55	201.0	COG0546@1|root,COG0546@2|Bacteria,4NMEX@976|Bacteroidetes,47XK8@768503|Cytophagia	976|Bacteroidetes	S	HAD-hyrolase-like	-	-	-	-	-	-	-	-	-	-	-	-	HAD_2
BYD3_k127_5184441_4	388413.ALPR1_16394	8.919e-70	241.0	COG4341@1|root,COG4341@2|Bacteria,4NPMZ@976|Bacteroidetes,47PFD@768503|Cytophagia	976|Bacteroidetes	S	HD domain	-	-	1.13.11.78	ko:K21196	ko00440,map00440	-	R10722	RC03261	ko00000,ko00001,ko01000	-	-	-	HD
BYD3_k127_5184441_0	880070.Cycma_2706	4.237e-199	629.0	COG1904@1|root,COG1904@2|Bacteria,4NFHS@976|Bacteroidetes,47KAP@768503|Cytophagia	976|Bacteroidetes	G	Glucuronate isomerase	uxaC	-	5.3.1.12	ko:K01812	ko00040,ko01100,map00040,map01100	M00061,M00631	R01482,R01983	RC00376	ko00000,ko00001,ko00002,ko01000	-	-	-	UxaC
BYD3_k127_5184441_1	742767.HMPREF9456_01730	1.907e-177	563.0	COG1312@1|root,COG1312@2|Bacteria,4NFA5@976|Bacteroidetes,2FM15@200643|Bacteroidia,22WGQ@171551|Porphyromonadaceae	976|Bacteroidetes	G	Catalyzes the dehydration of D-mannonate	uxuA	GO:0003674,GO:0003824,GO:0005488,GO:0005506,GO:0005975,GO:0005996,GO:0006063,GO:0006064,GO:0006082,GO:0008150,GO:0008152,GO:0008198,GO:0008927,GO:0009056,GO:0009987,GO:0016052,GO:0016054,GO:0016829,GO:0016835,GO:0016836,GO:0019585,GO:0019752,GO:0030145,GO:0032787,GO:0042839,GO:0042840,GO:0043167,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044281,GO:0044282,GO:0046365,GO:0046395,GO:0046872,GO:0046914,GO:0071704,GO:0072329,GO:1901575	4.2.1.8	ko:K01686	ko00040,ko01100,map00040,map01100	M00061	R05606	RC00543	ko00000,ko00001,ko00002,ko01000	-	-	-	UxuA
BYD3_k127_5184441_3	1123008.KB905714_gene3561	4.937e-101	335.0	COG1028@1|root,COG1028@2|Bacteria,4NG8R@976|Bacteroidetes,2FMB9@200643|Bacteroidia,22WEJ@171551|Porphyromonadaceae	976|Bacteroidetes	IQ	KR domain	uxuB	-	-	-	-	-	-	-	-	-	-	-	adh_short,adh_short_C2
BYD3_k127_5184441_7	471854.Dfer_5328	8.223e-11	66.0	COG1595@1|root,COG1595@2|Bacteria,4NSXH@976|Bacteroidetes,47RK0@768503|Cytophagia	976|Bacteroidetes	K	Sigma-70, region 4	-	-	-	ko:K03088	-	-	-	-	ko00000,ko03021	-	-	-	Sigma70_r2,Sigma70_r4_2
BYD3_k127_5190972_3	1121875.KB907547_gene3048	3.109e-39	149.0	COG0596@1|root,COG0596@2|Bacteria,4NZUP@976|Bacteroidetes,1HZ6I@117743|Flavobacteriia	976|Bacteroidetes	S	Releases the N-terminal proline from various substrates	-	-	3.4.11.5	ko:K01259	ko00330,map00330	-	R00135	-	ko00000,ko00001,ko01000,ko01002	-	-	-	Abhydrolase_1
BYD3_k127_5190972_0	760192.Halhy_0886	0.0	1396.0	COG0793@1|root,COG4946@1|root,COG0793@2|Bacteria,COG4946@2|Bacteria,4NGU2@976|Bacteroidetes,1IWHI@117747|Sphingobacteriia	976|Bacteroidetes	M	Tricorn protease PDZ domain	-	-	-	ko:K08676	-	-	-	-	ko00000,ko01000,ko01002	-	-	-	PD40,Peptidase_S41,Tricorn_C1,Tricorn_PDZ
BYD3_k127_5190972_2	1123057.P872_21170	2.133e-53	190.0	COG3631@1|root,COG3631@2|Bacteria	2|Bacteria	S	light absorption	tauX	-	-	ko:K07255,ko:K21700	ko00430,map00430	-	R01685	RC00062	ko00000,ko00001,ko01000	-	-	-	SnoaL_2
BYD3_k127_5190972_4	1112204.GPOL_c08490	1.248e-05	47.0	COG3631@1|root,COG3631@2|Bacteria,2GR1G@201174|Actinobacteria	201174|Actinobacteria	S	SnoaL-like domain	-	-	-	-	-	-	-	-	-	-	-	-	SnoaL_2
BYD3_k127_5190972_1	1121890.AUDO01000006_gene1274	2.206e-54	198.0	COG2930@1|root,COG2930@2|Bacteria,4NP71@976|Bacteroidetes,1I20I@117743|Flavobacteriia,2NV59@237|Flavobacterium	976|Bacteroidetes	S	Las17-binding protein actin regulator	-	-	-	-	-	-	-	-	-	-	-	-	Ysc84
BYD3_k127_5212015_6	760192.Halhy_5576	1.106e-14	76.0	COG0577@1|root,COG0577@2|Bacteria,4NDUK@976|Bacteroidetes,1IQFY@117747|Sphingobacteriia	976|Bacteroidetes	V	MacB-like periplasmic core domain	-	-	-	-	-	-	-	-	-	-	-	-	FtsX,MacB_PCD
BYD3_k127_5212015_1	1237149.C900_04094	4.661e-161	518.0	COG5000@1|root,COG5000@2|Bacteria,4NEWF@976|Bacteroidetes,47JZG@768503|Cytophagia	976|Bacteroidetes	T	Histidine kinase	-	-	-	-	-	-	-	-	-	-	-	-	HATPase_c,PAS_8
BYD3_k127_5212015_4	1237149.C900_04093	1.248e-83	280.0	COG2204@1|root,COG2204@2|Bacteria,4NE89@976|Bacteroidetes,47JF9@768503|Cytophagia	976|Bacteroidetes	T	two component, sigma54 specific, transcriptional regulator, Fis family	-	-	-	-	-	-	-	-	-	-	-	-	HTH_8,Response_reg,Sigma54_activat
BYD3_k127_5212015_2	1237149.C900_04093	7.567e-143	456.0	COG2204@1|root,COG2204@2|Bacteria,4NE89@976|Bacteroidetes,47JF9@768503|Cytophagia	976|Bacteroidetes	T	two component, sigma54 specific, transcriptional regulator, Fis family	-	-	-	-	-	-	-	-	-	-	-	-	HTH_8,Response_reg,Sigma54_activat
BYD3_k127_5212015_0	1237149.C900_04092	2.04e-177	564.0	COG0845@1|root,COG0845@2|Bacteria,4NDUH@976|Bacteroidetes,47N10@768503|Cytophagia	976|Bacteroidetes	M	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family	-	-	-	ko:K02005	-	-	-	-	ko00000	-	-	-	Biotin_lipoyl_2,HlyD_3,HlyD_D23
BYD3_k127_5212015_3	1237149.C900_04091	6.521e-137	436.0	COG1136@1|root,COG1136@2|Bacteria,4NFDW@976|Bacteroidetes,47KMI@768503|Cytophagia	976|Bacteroidetes	V	ABC transporter	-	-	-	ko:K02003	-	M00258	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	ABC_tran
BYD3_k127_5212015_5	1121904.ARBP01000005_gene4772	6.34e-17	82.0	COG0577@1|root,COG0577@2|Bacteria,4NKYD@976|Bacteroidetes,47MU6@768503|Cytophagia	976|Bacteroidetes	V	MacB-like periplasmic core domain	-	-	-	-	-	-	-	-	-	-	-	-	FtsX,MacB_PCD
BYD3_k127_5228457_1	1185876.BN8_01538	3.495e-152	492.0	COG0673@1|root,COG0673@2|Bacteria,4NGGS@976|Bacteroidetes,47JH2@768503|Cytophagia	976|Bacteroidetes	S	Oxidoreductase family, C-terminal alpha/beta domain	-	-	-	-	-	-	-	-	-	-	-	-	GFO_IDH_MocA
BYD3_k127_5228457_2	1123508.JH636440_gene2840	2.021e-121	406.0	COG3391@1|root,COG3391@2|Bacteria,2IY6R@203682|Planctomycetes	203682|Planctomycetes	S	amine dehydrogenase activity	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_5228457_0	1237149.C900_04654	1.487e-280	889.0	COG0577@1|root,COG0577@2|Bacteria,4NDUK@976|Bacteroidetes,47JJN@768503|Cytophagia	976|Bacteroidetes	V	FtsX-like permease family	-	-	-	ko:K02004	-	M00258	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	FtsX,MacB_PCD
BYD3_k127_5228457_3	1048983.EL17_01515	1.797e-97	326.0	COG1028@1|root,COG1028@2|Bacteria,4NFK6@976|Bacteroidetes,47M2H@768503|Cytophagia	976|Bacteroidetes	IQ	Short-chain dehydrogenase reductase SDR	-	-	-	-	-	-	-	-	-	-	-	-	adh_short_C2
BYD3_k127_5228990_2	1538644.KO02_16545	1.528e-89	303.0	COG0682@1|root,COG0682@2|Bacteria,4NFP7@976|Bacteroidetes,1IQYZ@117747|Sphingobacteriia	976|Bacteroidetes	M	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins	lgt	-	-	-	-	-	-	-	-	-	-	-	LGT
BYD3_k127_5228990_1	886293.Sinac_1335	1.69e-91	307.0	COG1413@1|root,COG1413@2|Bacteria,2IYWU@203682|Planctomycetes	203682|Planctomycetes	C	Domain of Unknown Function (DUF1080)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1080
BYD3_k127_5228990_3	984262.SGRA_3867	1.095e-09	66.0	COG2885@1|root,COG2885@2|Bacteria,4NKCW@976|Bacteroidetes	976|Bacteroidetes	M	Belongs to the ompA family	-	-	-	-	-	-	-	-	-	-	-	-	OmpA
BYD3_k127_5228990_0	504472.Slin_3895	6.268e-154	493.0	COG1312@1|root,COG1312@2|Bacteria,4NF30@976|Bacteroidetes,47N1H@768503|Cytophagia	976|Bacteroidetes	G	Catalyzes the dehydration of D-mannonate	-	-	4.2.1.8	ko:K01686	ko00040,ko01100,map00040,map01100	M00061	R05606	RC00543	ko00000,ko00001,ko00002,ko01000	-	-	-	UxuA
BYD3_k127_5228990_4	471854.Dfer_1410	8.055e-05	46.0	COG2610@1|root,COG2610@2|Bacteria,4NJ5B@976|Bacteroidetes,47K2S@768503|Cytophagia	976|Bacteroidetes	EG	PFAM Gluconate transporter	-	-	-	ko:K03299	-	-	-	-	ko00000,ko02000	2.A.8	-	-	GntP_permease
BYD3_k127_5230598_8	1218103.CIN01S_12_00170	3.482e-49	179.0	COG1670@1|root,COG1670@2|Bacteria,4NM3W@976|Bacteroidetes,1I1MN@117743|Flavobacteriia,3ZSTN@59732|Chryseobacterium	976|Bacteroidetes	J	Acetyltransferase (GNAT) domain	-	-	-	-	-	-	-	-	-	-	-	-	Acetyltransf_3
BYD3_k127_5230598_5	1123276.KB893268_gene4951	3.376e-53	193.0	2BGPZ@1|root,32ANW@2|Bacteria,4NQPT@976|Bacteroidetes,47QDH@768503|Cytophagia	976|Bacteroidetes	S	DinB superfamily	-	-	-	-	-	-	-	-	-	-	-	-	DinB_2
BYD3_k127_5230598_3	1121897.AUGO01000016_gene1075	1.463e-62	221.0	COG0596@1|root,COG0596@2|Bacteria,4PKKR@976|Bacteroidetes,1IJBZ@117743|Flavobacteriia,2NYSA@237|Flavobacterium	976|Bacteroidetes	S	Alpha beta hydrolase	-	-	-	-	-	-	-	-	-	-	-	-	Abhydrolase_6,UPF0227
BYD3_k127_5230598_9	1121904.ARBP01000001_gene5479	5.876e-41	157.0	2DM9Y@1|root,32AJ6@2|Bacteria,4NQQC@976|Bacteroidetes,47PRQ@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_5230598_11	1121904.ARBP01000005_gene4772	1.555e-11	66.0	COG0577@1|root,COG0577@2|Bacteria,4NKYD@976|Bacteroidetes,47MU6@768503|Cytophagia	976|Bacteroidetes	V	MacB-like periplasmic core domain	-	-	-	-	-	-	-	-	-	-	-	-	FtsX,MacB_PCD
BYD3_k127_5230598_12	1237149.C900_05293	0.0004026	45.0	COG0577@1|root,COG0577@2|Bacteria,4NKYD@976|Bacteroidetes,47MU6@768503|Cytophagia	976|Bacteroidetes	V	MacB-like periplasmic core domain	-	-	-	-	-	-	-	-	-	-	-	-	FtsX,MacB_PCD
BYD3_k127_5230598_6	1107311.Q767_14675	8.73e-51	187.0	COG0702@1|root,COG0702@2|Bacteria,4NMI5@976|Bacteroidetes,1IJ1D@117743|Flavobacteriia	976|Bacteroidetes	GM	NmrA-like family	-	-	-	-	-	-	-	-	-	-	-	-	NAD_binding_10
BYD3_k127_5230598_4	1121904.ARBP01000024_gene6662	2.361e-58	211.0	COG2162@1|root,COG2162@2|Bacteria,4NPEY@976|Bacteroidetes,47QTB@768503|Cytophagia	976|Bacteroidetes	Q	Belongs to the arylamine N-acetyltransferase family	nat	-	2.3.1.118	ko:K00675	-	-	-	-	ko00000,ko01000	-	-	-	Acetyltransf_2
BYD3_k127_5230598_2	929556.Solca_2931	1.129e-70	243.0	COG0262@1|root,COG0262@2|Bacteria,4NPX6@976|Bacteroidetes,1IX9S@117747|Sphingobacteriia	976|Bacteroidetes	H	RibD C-terminal domain	-	-	1.5.1.3	ko:K00287	ko00670,ko00790,ko01100,ko01523,map00670,map00790,map01100,map01523	M00126,M00840	R00936,R00937,R00939,R00940,R02235,R02236,R11765	RC00109,RC00110,RC00158	ko00000,ko00001,ko00002,ko01000	-	-	-	RibD_C
BYD3_k127_5230598_7	471854.Dfer_0755	2.732e-49	178.0	COG3795@1|root,COG3795@2|Bacteria,4NTI1@976|Bacteroidetes,47XVQ@768503|Cytophagia	976|Bacteroidetes	S	YCII-related domain	-	-	-	-	-	-	-	-	-	-	-	-	YCII
BYD3_k127_5230598_0	700598.Niako_1979	2.993e-184	584.0	COG4941@1|root,COG4941@2|Bacteria,4NGCS@976|Bacteroidetes,1IRPG@117747|Sphingobacteriia	976|Bacteroidetes	K	PFAM RNA polymerase sigma-70 region 2	-	-	-	ko:K03088	-	-	-	-	ko00000,ko03021	-	-	-	Sigma70_r2,Sigma70_r4_2
BYD3_k127_5230598_1	509635.N824_22820	2.994e-82	280.0	COG4912@1|root,COG4912@2|Bacteria,4NKBS@976|Bacteroidetes,1IX96@117747|Sphingobacteriia	976|Bacteroidetes	L	DNA alkylation repair enzyme	-	-	-	-	-	-	-	-	-	-	-	-	DNA_alkylation
BYD3_k127_5230598_10	1047013.AQSP01000134_gene1348	3.889e-19	88.0	COG0577@1|root,COG0577@2|Bacteria	2|Bacteria	V	efflux transmembrane transporter activity	-	-	-	ko:K02004	-	M00258	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	FtsX,MacB_PCD
BYD3_k127_5232360_1	760192.Halhy_6306	4.171e-160	515.0	COG0520@1|root,COG0520@2|Bacteria,4NF4G@976|Bacteroidetes,1IR6S@117747|Sphingobacteriia	976|Bacteroidetes	E	Aminotransferase class-V	-	-	-	-	-	-	-	-	-	-	-	-	Aminotran_5
BYD3_k127_5232360_8	643867.Ftrac_0842	1.973e-30	125.0	2CH3Z@1|root,32RP9@2|Bacteria,4NQUA@976|Bacteroidetes,47PY7@768503|Cytophagia	976|Bacteroidetes	S	Protein of unknown function (DUF2721)	-	-	-	-	-	-	-	-	-	-	-	-	DUF2721
BYD3_k127_5232360_2	153721.MYP_4138	2.033e-146	475.0	COG2270@1|root,COG2270@2|Bacteria,4PKPY@976|Bacteroidetes	976|Bacteroidetes	S	Transmembrane secretion effector	-	-	-	-	-	-	-	-	-	-	-	-	MFS_3
BYD3_k127_5232360_6	485918.Cpin_0719	8.996e-56	200.0	COG3172@1|root,COG3172@2|Bacteria,4NFNZ@976|Bacteroidetes,1ISIF@117747|Sphingobacteriia	976|Bacteroidetes	H	ATPase kinase involved in NAD metabolism	nadR	-	-	-	-	-	-	-	-	-	-	-	AAA_28
BYD3_k127_5232360_3	1237149.C900_03142	2.867e-95	329.0	COG1231@1|root,COG1231@2|Bacteria,4NKW2@976|Bacteroidetes,47NSQ@768503|Cytophagia	976|Bacteroidetes	E	Flavin containing amine oxidoreductase	-	-	-	-	-	-	-	-	-	-	-	-	Amino_oxidase
BYD3_k127_5232360_4	743722.Sph21_3586	3.02e-74	258.0	COG0730@1|root,COG0730@2|Bacteria,4NFWP@976|Bacteroidetes,1IRY3@117747|Sphingobacteriia	976|Bacteroidetes	S	membrane transporter protein	-	-	-	ko:K07090	-	-	-	-	ko00000	-	-	-	TauE
BYD3_k127_5232360_5	1122226.AUHX01000001_gene753	8.414e-74	254.0	COG0797@1|root,COG0797@2|Bacteria,4NSF1@976|Bacteroidetes,1I5I6@117743|Flavobacteriia	976|Bacteroidetes	M	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides	rlpA	-	-	ko:K03642	-	-	-	-	ko00000	-	-	-	DPBB_1,SPOR
BYD3_k127_5232360_0	983544.Lacal_0076	1.042e-203	645.0	COG0516@1|root,COG0517@1|root,COG0516@2|Bacteria,COG0517@2|Bacteria,4NDXQ@976|Bacteroidetes,1HWYC@117743|Flavobacteriia	976|Bacteroidetes	F	Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth	guaB	-	1.1.1.205	ko:K00088	ko00230,ko00983,ko01100,ko01110,map00230,map00983,map01100,map01110	M00050	R01130,R08240	RC00143,RC02207	ko00000,ko00001,ko00002,ko01000,ko04147	-	-	-	CBS,IMPDH
BYD3_k127_5232360_7	269798.CHU_0835	2.311e-37	154.0	COG5492@1|root,COG5492@2|Bacteria,4PKMF@976|Bacteroidetes,47QU9@768503|Cytophagia	976|Bacteroidetes	N	cellulose binding	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_5244877_1	925409.KI911562_gene1237	3.293e-167	540.0	COG1538@1|root,COG1538@2|Bacteria,4NIVU@976|Bacteroidetes,1IQ2T@117747|Sphingobacteriia	976|Bacteroidetes	MU	outer membrane efflux protein	-	-	-	-	-	-	-	-	-	-	-	-	OEP
BYD3_k127_5244877_0	700598.Niako_0780	0.0	1567.0	COG0841@1|root,COG0841@2|Bacteria,4NG7I@976|Bacteroidetes,1INVR@117747|Sphingobacteriia	976|Bacteroidetes	V	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family	-	-	-	-	-	-	-	-	-	-	-	-	ACR_tran
BYD3_k127_5244877_2	700598.Niako_0781	9.317e-133	432.0	COG0845@1|root,COG0845@2|Bacteria,4NH4Z@976|Bacteroidetes,1INZ6@117747|Sphingobacteriia	976|Bacteroidetes	M	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family	-	-	-	-	-	-	-	-	-	-	-	-	HlyD_D23
BYD3_k127_5244877_3	761193.Runsl_1720	5.988e-79	268.0	COG2148@1|root,COG2148@2|Bacteria,4NF29@976|Bacteroidetes,47PNC@768503|Cytophagia	976|Bacteroidetes	M	PFAM Bacterial sugar transferase	wcgN	-	2.7.8.36	ko:K15915	-	-	R10184	RC00002	ko00000,ko01000	-	-	-	Bac_transf
BYD3_k127_5244877_4	1121481.AUAS01000014_gene2467	1.387e-28	119.0	COG0110@1|root,COG0110@2|Bacteria,4NNTF@976|Bacteroidetes,47PVW@768503|Cytophagia	976|Bacteroidetes	S	TIGRFAM sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family	-	-	-	ko:K19429	-	-	-	-	ko00000,ko01000	-	-	-	Hexapep,NAD_binding_9
BYD3_k127_5247185_2	1185876.BN8_01562	8.333e-57	200.0	COG4770@1|root,COG4770@2|Bacteria,4NM1W@976|Bacteroidetes,47M7U@768503|Cytophagia	976|Bacteroidetes	I	PFAM Carbamoyl-phosphate synthase L chain, ATP binding	-	-	6.3.4.14,6.4.1.2,6.4.1.3	ko:K01961,ko:K01965	ko00061,ko00280,ko00620,ko00630,ko00640,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00061,map00280,map00620,map00630,map00640,map00720,map01100,map01110,map01120,map01130,map01200,map01212	M00082,M00373,M00376,M00741	R00742,R01859,R04385	RC00040,RC00097,RC00253,RC00367,RC00609	ko00000,ko00001,ko00002,ko01000	-	-	-	Biotin_carb_C,Biotin_carb_N,CPSase_L_D2
BYD3_k127_5247185_0	1237149.C900_04344	9.327e-212	663.0	COG0156@1|root,COG0156@2|Bacteria,4NFRY@976|Bacteroidetes,47KDV@768503|Cytophagia	976|Bacteroidetes	E	PFAM Aminotransferase class I and II	-	-	2.3.1.29	ko:K00639	ko00260,map00260	-	R00371	RC00004,RC00394	ko00000,ko00001,ko01000,ko01007	-	-	-	Aminotran_1_2
BYD3_k127_5247185_5	1358423.N180_11885	1.897e-22	97.0	2BVK8@1|root,32Y0S@2|Bacteria,4NUUA@976|Bacteroidetes	976|Bacteroidetes	S	histone H1-like protein	-	-	-	-	-	-	-	-	-	-	-	-	Hc1
BYD3_k127_5247185_1	1237149.C900_02553	2.368e-103	343.0	COG0329@1|root,COG0329@2|Bacteria,4NFP9@976|Bacteroidetes,47MC7@768503|Cytophagia	976|Bacteroidetes	E	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)	dapA	-	4.3.3.7	ko:K01714	ko00261,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00261,map00300,map01100,map01110,map01120,map01130,map01230	M00016,M00525,M00526,M00527	R10147	RC03062,RC03063	ko00000,ko00001,ko00002,ko01000	-	-	-	DHDPS
BYD3_k127_5247185_3	1237149.C900_02552	3.98e-40	154.0	2ENX1@1|root,33GHZ@2|Bacteria,4NXFU@976|Bacteroidetes,47WQI@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_5247185_4	1237149.C900_02551	6.675e-36	139.0	COG0272@1|root,COG0272@2|Bacteria,4NE2X@976|Bacteroidetes,47KR4@768503|Cytophagia	976|Bacteroidetes	L	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA	ligA	GO:0003674,GO:0003824,GO:0003909,GO:0003911,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006266,GO:0006281,GO:0006284,GO:0006288,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016874,GO:0016886,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050896,GO:0051103,GO:0051716,GO:0071704,GO:0090304,GO:0140097,GO:1901360	6.5.1.2	ko:K01972	ko03030,ko03410,ko03420,ko03430,map03030,map03410,map03420,map03430	-	R00382	RC00005	ko00000,ko00001,ko01000,ko03032,ko03400	-	-	-	BRCT,DNA_ligase_OB,DNA_ligase_ZBD,DNA_ligase_aden,HHH_2,HHH_5
BYD3_k127_5267195_3	485918.Cpin_2954	1.76e-78	271.0	COG0577@1|root,COG0577@2|Bacteria,4NDW7@976|Bacteroidetes	976|Bacteroidetes	V	FtsX-like permease family	-	-	-	-	-	-	-	-	-	-	-	-	FtsX,MacB_PCD
BYD3_k127_5267195_0	760192.Halhy_3928	6.57e-237	743.0	COG0823@1|root,COG0823@2|Bacteria,4NG4S@976|Bacteroidetes,1IVMQ@117747|Sphingobacteriia	976|Bacteroidetes	U	WD40-like Beta Propeller Repeat	-	-	-	ko:K03641	-	-	-	-	ko00000,ko02000	2.C.1.2	-	-	PD40
BYD3_k127_5267195_1	1121875.KB907555_gene423	2.688e-196	622.0	COG1696@1|root,COG1696@2|Bacteria,4NFK5@976|Bacteroidetes,1HWM1@117743|Flavobacteriia	976|Bacteroidetes	M	Membrane protein involved in D-alanine export	-	-	-	-	-	-	-	-	-	-	-	-	MBOAT
BYD3_k127_5267195_2	1506583.JQJY01000007_gene4162	9.589e-80	276.0	2DQSM@1|root,338E7@2|Bacteria,4PMF7@976|Bacteroidetes,1I3QR@117743|Flavobacteriia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_5267195_4	1123008.KB905694_gene1715	1.947e-50	184.0	2CB8S@1|root,30PE6@2|Bacteria,4NU1E@976|Bacteroidetes	976|Bacteroidetes	S	Protein of unknown function (DUF4199)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4199
BYD3_k127_5267195_5	1121898.Q766_16510	6.783e-29	117.0	COG2197@1|root,COG2197@2|Bacteria,4NQSY@976|Bacteroidetes,1I3EM@117743|Flavobacteriia,2NWUY@237|Flavobacterium	976|Bacteroidetes	KT	LuxR family transcriptional regulator	-	-	-	-	-	-	-	-	-	-	-	-	GerE
BYD3_k127_531400_5	1189612.A33Q_2144	4.687e-42	157.0	COG2010@1|root,COG2132@1|root,COG2010@2|Bacteria,COG2132@2|Bacteria,4NEXP@976|Bacteroidetes,47TIV@768503|Cytophagia	976|Bacteroidetes	C	Multicopper oxidase	nirK	-	1.7.2.1	ko:K00368,ko:K00405	ko00190,ko00910,ko01100,ko01120,ko02020,map00190,map00910,map01100,map01120,map02020	M00156,M00529	R00783,R00785	RC00086	ko00000,ko00001,ko00002,ko01000	3.D.4.3	-	-	Cu-oxidase,Cu-oxidase_3,Cytochrom_C,Cytochrome_CBB3
BYD3_k127_531400_3	929556.Solca_2886	1.833e-78	271.0	COG1262@1|root,COG1262@2|Bacteria,4NGBN@976|Bacteroidetes,1IUAX@117747|Sphingobacteriia	976|Bacteroidetes	S	Sulfatase-modifying factor enzyme 1	-	-	-	-	-	-	-	-	-	-	-	-	FGE-sulfatase
BYD3_k127_531400_4	1137281.D778_00607	3.049e-45	172.0	COG1999@1|root,COG1999@2|Bacteria,4NN4N@976|Bacteroidetes,1I17P@117743|Flavobacteriia	976|Bacteroidetes	S	protein SCO1 SenC PrrC involved in biogenesis of respiratory and photosynthetic systems	-	-	-	ko:K07152	-	-	-	-	ko00000,ko03029	-	-	-	SCO1-SenC
BYD3_k127_531400_1	1123248.KB893328_gene913	1.389e-176	560.0	COG1858@1|root,COG1858@2|Bacteria,4NJ4X@976|Bacteroidetes	976|Bacteroidetes	P	cytochrome C peroxidase	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_531400_7	1123037.AUDE01000005_gene3088	4.737e-15	76.0	COG4191@1|root,COG4191@2|Bacteria,4NEJX@976|Bacteroidetes,1I0JH@117743|Flavobacteriia	976|Bacteroidetes	T	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase	-	-	-	-	-	-	-	-	-	-	-	-	7TMR-DISMED2,7TMR-DISM_7TM,HATPase_c,HisKA,SnoaL_3
BYD3_k127_531400_6	1166018.FAES_2576	1.135e-18	94.0	2E25C@1|root,32XC8@2|Bacteria,4NTJ4@976|Bacteroidetes,47QKP@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_531400_2	504472.Slin_6082	4.467e-115	375.0	COG3507@1|root,COG3507@2|Bacteria,4NKNH@976|Bacteroidetes,47K70@768503|Cytophagia	976|Bacteroidetes	G	Belongs to the glycosyl hydrolase 43 family	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_531400_0	504472.Slin_6081	1.562e-261	812.0	COG3507@1|root,COG3507@2|Bacteria,4NFU3@976|Bacteroidetes,47NII@768503|Cytophagia	976|Bacteroidetes	G	Belongs to the glycosyl hydrolase 43 family	-	-	3.2.1.99	ko:K06113	-	-	-	-	ko00000,ko01000	-	GH43	-	Glyco_hydro_43,RicinB_lectin_2
BYD3_k127_5315902_5	313596.RB2501_04510	6.763e-05	47.0	2BTQM@1|root,32NXS@2|Bacteria,4PFK3@976|Bacteroidetes,1I7AQ@117743|Flavobacteriia	976|Bacteroidetes	S	TIR domain	-	-	-	-	-	-	-	-	-	-	-	-	TIR_2
BYD3_k127_5315902_1	468059.AUHA01000008_gene2740	1.489e-87	294.0	COG0177@1|root,COG0177@2|Bacteria,4NMJS@976|Bacteroidetes,1IVII@117747|Sphingobacteriia	976|Bacteroidetes	L	PFAM HhH-GPD superfamily base excision DNA repair protein	-	-	4.2.99.18	ko:K10773	ko03410,map03410	-	-	-	ko00000,ko00001,ko01000,ko03400	-	-	-	HhH-GPD
BYD3_k127_5315902_0	925409.KI911562_gene2742	7.544e-163	518.0	COG2114@1|root,COG2204@1|root,COG2114@2|Bacteria,COG2204@2|Bacteria,4NF1F@976|Bacteroidetes,1IPZU@117747|Sphingobacteriia	976|Bacteroidetes	T	Adenylyl- / guanylyl cyclase, catalytic domain	-	-	-	-	-	-	-	-	-	-	-	-	Guanylate_cyc,Response_reg
BYD3_k127_5315902_2	925409.KI911562_gene2743	4.605e-53	190.0	COG0745@1|root,COG0745@2|Bacteria,4NQ69@976|Bacteroidetes,1ISWK@117747|Sphingobacteriia	976|Bacteroidetes	T	cheY-homologous receiver domain	-	-	-	-	-	-	-	-	-	-	-	-	Response_reg
BYD3_k127_5315902_4	929562.Emtol_3263	8.1e-20	96.0	COG0457@1|root,COG4191@1|root,COG0457@2|Bacteria,COG4191@2|Bacteria,4NEJX@976|Bacteroidetes,47KW1@768503|Cytophagia	976|Bacteroidetes	T	Histidine kinase	-	-	-	-	-	-	-	-	-	-	-	-	HATPase_c,HisKA,TPR_12,TPR_8
BYD3_k127_5315902_3	1189619.pgond44_14078	1.594e-27	111.0	COG4191@1|root,COG4191@2|Bacteria,4NEJX@976|Bacteroidetes,1I0JH@117743|Flavobacteriia	976|Bacteroidetes	T	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase	-	-	-	-	-	-	-	-	-	-	-	-	7TMR-DISMED2,7TMR-DISM_7TM,GAF_2,HATPase_c,HisKA
BYD3_k127_532842_3	1237149.C900_00644	1.752e-47	173.0	COG2937@1|root,COG2937@2|Bacteria,4NK5H@976|Bacteroidetes,47M20@768503|Cytophagia	976|Bacteroidetes	I	Belongs to the GPAT DAPAT family	plsB	-	2.3.1.15	ko:K00631	ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110	M00089	R00851,R09380	RC00004,RC00039,RC00041	ko00000,ko00001,ko00002,ko01000,ko01004	-	-	-	Acyltransferase
BYD3_k127_532842_0	1237149.C900_00643	1.435e-154	494.0	COG0240@1|root,COG0240@2|Bacteria,4NF4R@976|Bacteroidetes,47K3D@768503|Cytophagia	976|Bacteroidetes	I	PFAM NAD-dependent glycerol-3-phosphate dehydrogenase	gpsA	-	1.1.1.94	ko:K00057	ko00564,ko01110,map00564,map01110	-	R00842,R00844	RC00029	ko00000,ko00001,ko01000	-	-	-	NAD_Gly3P_dh_C,NAD_Gly3P_dh_N
BYD3_k127_532842_2	643867.Ftrac_0458	1.059e-94	319.0	COG3781@1|root,COG3781@2|Bacteria,4NEB1@976|Bacteroidetes,47N85@768503|Cytophagia	976|Bacteroidetes	S	Bestrophin, RFP-TM, chloride channel	-	-	-	ko:K08994	-	-	-	-	ko00000,ko02000	1.A.46.2	-	-	Bestrophin
BYD3_k127_532842_1	1237149.C900_05303	3.293e-128	415.0	COG0330@1|root,COG0330@2|Bacteria,4NEBV@976|Bacteroidetes,47JW8@768503|Cytophagia	976|Bacteroidetes	O	membrane protease	-	-	-	-	-	-	-	-	-	-	-	-	Band_7
BYD3_k127_532842_6	1237149.C900_05301	2.795e-21	94.0	COG4877@1|root,COG4877@2|Bacteria,4NXSU@976|Bacteroidetes,47T6F@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	Arc,RHH_5
BYD3_k127_532842_4	1123277.KB893194_gene5828	2.938e-36	141.0	2C87P@1|root,32H7J@2|Bacteria,4NS7S@976|Bacteroidetes,47R39@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	DoxX_2
BYD3_k127_533288_0	925409.KI911562_gene991	6.775e-212	668.0	COG1529@1|root,COG1529@2|Bacteria,4NFFU@976|Bacteroidetes,1IR1H@117747|Sphingobacteriia	976|Bacteroidetes	C	PFAM Aldehyde oxidase xanthine dehydrogenase, molybdopterin binding	-	-	1.3.99.16	ko:K07303	-	-	-	-	ko00000,ko01000	-	-	-	Ald_Xan_dh_C2
BYD3_k127_533288_2	1237149.C900_00534	1.083e-33	134.0	COG2010@1|root,COG2010@2|Bacteria,4NEXP@976|Bacteroidetes,47R7P@768503|Cytophagia	976|Bacteroidetes	C	Cytochrome C oxidase, cbb3-type, subunit III	-	-	-	ko:K00405	ko00190,ko01100,ko02020,map00190,map01100,map02020	M00156	-	-	ko00000,ko00001,ko00002	3.D.4.3	-	-	Cytochrom_C,Cytochrome_CBB3
BYD3_k127_533288_1	1237149.C900_00538	4.454e-131	429.0	COG1975@1|root,COG1975@2|Bacteria,4NG02@976|Bacteroidetes,47JA8@768503|Cytophagia	976|Bacteroidetes	O	Xanthine and CO dehydrogenases maturation factor, XdhC CoxF family	-	-	-	ko:K07402	-	-	-	-	ko00000	-	-	-	XdhC_C,XdhC_CoxI
BYD3_k127_534491_5	929703.KE386491_gene1000	9.871e-13	68.0	COG0702@1|root,COG0702@2|Bacteria,4NJCW@976|Bacteroidetes,47Q5P@768503|Cytophagia	976|Bacteroidetes	GM	NmrA-like family	-	-	-	-	-	-	-	-	-	-	-	-	NAD_binding_10,SUKH_5
BYD3_k127_534491_2	504472.Slin_0951	1.896e-33	136.0	COG0135@1|root,COG0135@2|Bacteria,4NMKY@976|Bacteroidetes,47PJ8@768503|Cytophagia	976|Bacteroidetes	E	isomerase	-	-	5.3.1.24	ko:K01817	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	M00023	R03509	RC00945	ko00000,ko00001,ko00002,ko01000	-	-	-	PRAI
BYD3_k127_534491_3	880071.Fleli_1985	3.468e-30	128.0	298K1@1|root,2ZVQX@2|Bacteria,4NNNX@976|Bacteroidetes,47Q8A@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_534491_0	1124780.ANNU01000025_gene3392	9.686e-116	391.0	COG1404@1|root,COG1404@2|Bacteria,4NEIJ@976|Bacteroidetes,47KS3@768503|Cytophagia	976|Bacteroidetes	O	Peptidase S8 and S53 subtilisin kexin sedolisin	aprN	-	-	-	-	-	-	-	-	-	-	-	Peptidase_S8
BYD3_k127_534491_1	1048983.EL17_07565	4.698e-97	322.0	COG0036@1|root,COG0036@2|Bacteria,4NDXB@976|Bacteroidetes,47N3P@768503|Cytophagia	976|Bacteroidetes	G	Belongs to the ribulose-phosphate 3-epimerase family	rpe	-	5.1.3.1	ko:K01783	ko00030,ko00040,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00040,map00710,map01100,map01110,map01120,map01130,map01200,map01230	M00004,M00007	R01529	RC00540	ko00000,ko00001,ko00002,ko01000	-	-	-	Ribul_P_3_epim
BYD3_k127_534491_4	1237149.C900_01231	3.988e-20	92.0	COG3417@1|root,COG3417@2|Bacteria,4NFXF@976|Bacteroidetes,47Q1R@768503|Cytophagia	976|Bacteroidetes	M	Peptidoglycan-synthase activator LpoB	-	-	-	ko:K07337	-	-	-	-	ko00000	-	-	-	LpoB
BYD3_k127_5353274_13	880070.Cycma_4549	7.447e-71	244.0	COG1629@1|root,COG4771@2|Bacteria,4NFQD@976|Bacteroidetes,47JHA@768503|Cytophagia	976|Bacteroidetes	P	TonB-dependent receptor	-	-	-	ko:K02014	-	-	-	-	ko00000,ko02000	1.B.14	-	-	CarbopepD_reg_2,Plug,TonB_dep_Rec
BYD3_k127_5353274_6	1237149.C900_00804	1.041e-113	370.0	COG0106@1|root,COG0106@2|Bacteria,4NK0E@976|Bacteroidetes,47NT9@768503|Cytophagia	976|Bacteroidetes	E	1-(5-phosphoribosyl)-5- (5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase	-	-	5.3.1.16	ko:K01814	ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230	M00026	R04640	RC00945	ko00000,ko00001,ko00002,ko01000	-	-	-	His_biosynth
BYD3_k127_5353274_7	1237149.C900_03498	2.405e-106	364.0	COG2885@1|root,COG2885@2|Bacteria,4NJB2@976|Bacteroidetes,47K81@768503|Cytophagia	976|Bacteroidetes	MU	OmpA family	-	-	-	-	-	-	-	-	-	-	-	-	PD40
BYD3_k127_5353274_17	1237149.C900_03497	9.891e-59	209.0	COG0457@1|root,COG0457@2|Bacteria,4NRIH@976|Bacteroidetes,47QEH@768503|Cytophagia	976|Bacteroidetes	S	Protein of unknown function (DUF2911)	-	-	-	-	-	-	-	-	-	-	-	-	DUF2911
BYD3_k127_5353274_18	1121904.ARBP01000006_gene3899	1.432e-58	208.0	COG1611@1|root,COG1611@2|Bacteria,4NGWU@976|Bacteroidetes,47Q15@768503|Cytophagia	976|Bacteroidetes	S	Belongs to the LOG family	-	-	3.2.2.10	ko:K06966	ko00230,ko00240,map00230,map00240	-	R00182,R00510	RC00063,RC00318	ko00000,ko00001,ko01000	-	-	-	Lysine_decarbox
BYD3_k127_5353274_5	1237149.C900_03492	4.1e-114	381.0	COG0793@1|root,COG0793@2|Bacteria,4NEF4@976|Bacteroidetes,47K87@768503|Cytophagia	976|Bacteroidetes	M	PDZ DHR GLGF domain protein	-	-	-	-	-	-	-	-	-	-	-	-	Asp_protease_2,PDZ,PDZ_2
BYD3_k127_5353274_19	1237149.C900_03491	3.722e-32	130.0	COG2197@1|root,COG2197@2|Bacteria	2|Bacteria	K	response regulator	-	-	-	-	-	-	-	-	-	-	-	-	DUF2087,GerE,Mor,Response_reg,Y_Y_Y
BYD3_k127_5353274_3	1237149.C900_03489	4.289e-126	414.0	COG0644@1|root,COG0644@2|Bacteria,4NE67@976|Bacteroidetes,47M1U@768503|Cytophagia	976|Bacteroidetes	C	FAD binding domain	fixC	-	-	-	-	-	-	-	-	-	-	-	FAD_binding_3,Lycopene_cycl,SE,Trp_halogenase
BYD3_k127_5353274_14	485918.Cpin_3254	8.861e-70	241.0	COG1309@1|root,COG1309@2|Bacteria,4NMW1@976|Bacteroidetes,1IS3Z@117747|Sphingobacteriia	976|Bacteroidetes	K	PFAM Bacterial regulatory proteins, tetR family	-	-	-	-	-	-	-	-	-	-	-	-	TetR_N
BYD3_k127_5353274_21	1121895.Q765_00785	5.894e-11	65.0	2A9J2@1|root,30YRE@2|Bacteria,4PCNE@976|Bacteroidetes,1I576@117743|Flavobacteriia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_5353274_0	929556.Solca_2915	4.528e-170	544.0	COG0477@1|root,COG2814@2|Bacteria,4NESW@976|Bacteroidetes,1IPCU@117747|Sphingobacteriia	976|Bacteroidetes	EGP	PFAM Major Facilitator Superfamily	-	-	-	-	-	-	-	-	-	-	-	-	MFS_1,Sugar_tr
BYD3_k127_5353274_8	1237149.C900_01545	6.375e-105	351.0	COG0382@1|root,COG0382@2|Bacteria,4NK26@976|Bacteroidetes,47N2W@768503|Cytophagia	976|Bacteroidetes	H	UbiA prenyltransferase family	-	-	2.5.1.74	ko:K02548	ko00130,ko01100,ko01110,map00130,map01100,map01110	M00116	R05617,R06858,R10757	RC02935,RC02936,RC03264	ko00000,ko00001,ko00002,ko01000,ko01006	-	-	-	UbiA
BYD3_k127_5353274_2	926549.KI421517_gene2232	2.691e-127	416.0	COG3424@1|root,COG3424@2|Bacteria,4NDZU@976|Bacteroidetes,47JU1@768503|Cytophagia	976|Bacteroidetes	Q	PFAM chalcone and stilbene	bcsA	-	-	-	-	-	-	-	-	-	-	-	Chal_sti_synt_C,Chal_sti_synt_N
BYD3_k127_5353274_12	1120966.AUBU01000013_gene414	1.529e-73	254.0	COG0500@1|root,COG2226@2|Bacteria,4NM9E@976|Bacteroidetes,47PMX@768503|Cytophagia	976|Bacteroidetes	Q	Methyltransferase	-	-	-	-	-	-	-	-	-	-	-	-	Methyltransf_25,Methyltransf_31
BYD3_k127_5353274_20	1453500.AT05_08105	5.338e-23	105.0	2CC29@1|root,32RUM@2|Bacteria,4NS83@976|Bacteroidetes	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_5353274_9	926549.KI421517_gene3893	5.595e-99	332.0	COG0598@1|root,COG0598@2|Bacteria,4NG3C@976|Bacteroidetes,47MH8@768503|Cytophagia	976|Bacteroidetes	P	Mediates influx of magnesium ions	corA	-	-	ko:K03284	-	-	-	-	ko00000,ko02000	1.A.35.1,1.A.35.3	-	-	CorA
BYD3_k127_5353274_1	760192.Halhy_2134	1.512e-165	531.0	COG1228@1|root,COG1228@2|Bacteria,4NFI3@976|Bacteroidetes,1IWRU@117747|Sphingobacteriia	976|Bacteroidetes	Q	COGs COG1228 Imidazolonepropionase and related amidohydrolase	-	-	-	-	-	-	-	-	-	-	-	-	Amidohydro_1
BYD3_k127_5353274_15	929562.Emtol_2377	8.214e-61	220.0	COG0823@1|root,COG0823@2|Bacteria,4NITC@976|Bacteroidetes,47R0N@768503|Cytophagia	976|Bacteroidetes	U	Involved in the tonB-independent uptake of proteins	-	-	-	-	-	-	-	-	-	-	-	-	PD40
BYD3_k127_5353274_10	866536.Belba_2931	5.656e-91	303.0	COG1428@1|root,COG1428@2|Bacteria,4NFA8@976|Bacteroidetes,47P9Q@768503|Cytophagia	976|Bacteroidetes	F	deoxynucleoside kinase	dck	-	-	-	-	-	-	-	-	-	-	-	dNK
BYD3_k127_5353274_16	1237149.C900_03196	1.124e-60	216.0	COG2350@1|root,COG2350@2|Bacteria	2|Bacteria	S	YCII-related domain	-	-	-	-	-	-	-	-	-	-	-	-	YCII
BYD3_k127_5353274_11	1123248.KB893348_gene343	1.199e-85	295.0	COG0697@1|root,COG0697@2|Bacteria,4NGPQ@976|Bacteroidetes,1IXG8@117747|Sphingobacteriia	976|Bacteroidetes	EG	EamA-like transporter family	-	-	-	-	-	-	-	-	-	-	-	-	EamA
BYD3_k127_5353274_4	1237149.C900_03194	3.733e-117	383.0	COG0520@1|root,COG0520@2|Bacteria,4NJEQ@976|Bacteroidetes,47NQ3@768503|Cytophagia	976|Bacteroidetes	E	Aminotransferase class-V	-	-	-	-	-	-	-	-	-	-	-	-	Aminotran_5
BYD3_k127_5403312_1	1237149.C900_02644	1.352e-61	216.0	2CC1H@1|root,33P9C@2|Bacteria	2|Bacteria	S	Domain of unknown function (DUF4252)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4252
BYD3_k127_5403312_0	1237149.C900_02648	1.085e-109	362.0	COG1131@1|root,COG1131@2|Bacteria,4NFNM@976|Bacteroidetes,47Q1V@768503|Cytophagia	976|Bacteroidetes	V	AAA domain, putative AbiEii toxin, Type IV TA system	-	-	-	ko:K01990	-	M00254	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	ABC_tran
BYD3_k127_5403312_2	1237149.C900_02649	3.015e-47	176.0	COG1277@1|root,COG1277@2|Bacteria,4NEES@976|Bacteroidetes,47WZW@768503|Cytophagia	976|Bacteroidetes	S	Excinuclease ABC subunit B	-	-	-	-	-	-	-	-	-	-	-	-	ABC2_membrane_2,ABC2_membrane_4
BYD3_k127_5414555_1	700598.Niako_3098	3.564e-175	558.0	COG3214@1|root,COG3214@2|Bacteria,4NF6V@976|Bacteroidetes,1IW75@117747|Sphingobacteriia	976|Bacteroidetes	S	Winged helix DNA-binding domain	-	-	-	ko:K09927	-	-	-	-	ko00000	-	-	-	HTH_42
BYD3_k127_5414555_9	926549.KI421517_gene1364	2.195e-11	70.0	COG4103@1|root,COG4103@2|Bacteria,4NUAN@976|Bacteroidetes,47R5X@768503|Cytophagia	976|Bacteroidetes	S	Tellurite resistance protein TerB	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_5414555_10	1121904.ARBP01000026_gene657	1.274e-05	51.0	COG4941@1|root,COG4941@2|Bacteria,4NGCS@976|Bacteroidetes,47M8X@768503|Cytophagia	976|Bacteroidetes	K	TIGRFAM RNA polymerase sigma factor, sigma-70 family	-	-	-	ko:K03088	-	-	-	-	ko00000,ko03021	-	-	-	Sigma70_r2,Sigma70_r4_2
BYD3_k127_5414555_3	1123248.KB893327_gene789	3.743e-120	393.0	2957S@1|root,2ZSK8@2|Bacteria	2|Bacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_5414555_6	411154.GFO_0037	2.309e-50	194.0	COG2114@1|root,COG2114@2|Bacteria,4NG5A@976|Bacteroidetes,1HYY0@117743|Flavobacteriia	976|Bacteroidetes	T	Adenylate and Guanylate cyclase catalytic domain	-	-	4.6.1.1	ko:K01768	ko00230,ko02025,ko04113,ko04213,map00230,map02025,map04113,map04213	M00695	R00089,R00434	RC00295	ko00000,ko00001,ko00002,ko01000	-	-	-	Guanylate_cyc
BYD3_k127_5414555_0	1144313.PMI10_02750	0.0	1210.0	COG0841@1|root,COG0841@2|Bacteria,4NDZG@976|Bacteroidetes,1I8CW@117743|Flavobacteriia	976|Bacteroidetes	V	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family	-	-	-	ko:K03296	-	-	-	-	ko00000	2.A.6.2	-	-	ACR_tran
BYD3_k127_5414555_5	694427.Palpr_2727	1.061e-94	321.0	COG0845@1|root,COG0845@2|Bacteria,4NF23@976|Bacteroidetes,2FUQH@200643|Bacteroidia,22YMF@171551|Porphyromonadaceae	976|Bacteroidetes	M	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family	-	-	-	-	-	-	-	-	-	-	-	-	HlyD_D23
BYD3_k127_5414555_4	694427.Palpr_2728	6.845e-102	349.0	COG1538@1|root,COG1538@2|Bacteria,4NF4X@976|Bacteroidetes,2FM4A@200643|Bacteroidia,22YBS@171551|Porphyromonadaceae	976|Bacteroidetes	MU	Outer membrane efflux protein	-	-	-	-	-	-	-	-	-	-	-	-	OEP
BYD3_k127_5414555_7	1189612.A33Q_1477	6.788e-47	184.0	COG2207@1|root,COG2207@2|Bacteria,4NIJV@976|Bacteroidetes,47XFM@768503|Cytophagia	976|Bacteroidetes	K	helix_turn_helix, arabinose operon control protein	-	-	-	-	-	-	-	-	-	-	-	-	HTH_18
BYD3_k127_5414555_2	1185876.BN8_03308	1.877e-130	433.0	COG1473@1|root,COG1473@2|Bacteria,4NEKH@976|Bacteroidetes,47N92@768503|Cytophagia	976|Bacteroidetes	S	Peptidase dimerisation domain	-	-	-	ko:K12941	-	-	-	-	ko00000,ko01002	-	-	-	M20_dimer,Peptidase_M20
BYD3_k127_5414555_8	616991.JPOO01000003_gene1353	4.174e-12	72.0	COG1082@1|root,COG1082@2|Bacteria,4NFMD@976|Bacteroidetes,1HZAA@117743|Flavobacteriia	976|Bacteroidetes	G	Xylose isomerase-like TIM barrel	-	-	-	-	-	-	-	-	-	-	-	-	AP_endonuc_2
BYD3_k127_542131_2	926550.CLDAP_23540	4.493e-133	433.0	COG0160@1|root,COG0739@1|root,COG2334@1|root,COG0160@2|Bacteria,COG0739@2|Bacteria,COG2334@2|Bacteria	2|Bacteria	S	homoserine kinase activity	gabT	-	2.6.1.19,2.6.1.22	ko:K00823,ko:K07250	ko00250,ko00280,ko00410,ko00640,ko00650,ko01100,ko01120,map00250,map00280,map00410,map00640,map00650,map01100,map01120	M00027	R00908,R01648,R04188	RC00006,RC00062,RC00160	ko00000,ko00001,ko00002,ko01000,ko01007	-	-	-	APH,Aminotran_3,Peptidase_M23
BYD3_k127_542131_0	471854.Dfer_5545	1.75e-263	833.0	COG0577@1|root,COG0577@2|Bacteria,4NDUK@976|Bacteroidetes,47JJN@768503|Cytophagia	976|Bacteroidetes	V	FtsX-like permease family	-	-	-	-	-	-	-	-	-	-	-	-	FtsX,MacB_PCD
BYD3_k127_542131_1	1288963.ADIS_4349	7.067e-245	768.0	COG2010@1|root,COG2133@1|root,COG2010@2|Bacteria,COG2133@2|Bacteria,4NDV1@976|Bacteroidetes,47JGM@768503|Cytophagia	976|Bacteroidetes	G	COGs COG2133 Glucose sorbosone dehydrogenase	-	-	-	-	-	-	-	-	-	-	-	-	Cytochrome_CBB3,GSDH
BYD3_k127_5421417_2	1123248.KB893381_gene999	2.027e-177	557.0	COG1082@1|root,COG1082@2|Bacteria,4NK9X@976|Bacteroidetes	976|Bacteroidetes	G	Xylose isomerase-like TIM barrel	-	-	-	-	-	-	-	-	-	-	-	-	AP_endonuc_2,AP_endonuc_2_N
BYD3_k127_5421417_3	1123248.KB893381_gene1000	4.894e-134	430.0	COG1028@1|root,COG1028@2|Bacteria,4NK3I@976|Bacteroidetes	976|Bacteroidetes	IQ	Enoyl-(Acyl carrier protein) reductase	-	-	-	-	-	-	-	-	-	-	-	-	adh_short_C2
BYD3_k127_5421417_1	1123277.KB893211_gene4416	1.035e-202	633.0	COG1063@1|root,COG1063@2|Bacteria,4NFSK@976|Bacteroidetes,47XCK@768503|Cytophagia	976|Bacteroidetes	E	Alcohol dehydrogenase GroES-like domain	-	-	1.1.1.14	ko:K00008	ko00040,ko00051,ko01100,map00040,map00051,map01100	M00014	R00875,R01896	RC00085,RC00102	ko00000,ko00001,ko00002,ko01000	-	-	-	ADH_N,ADH_zinc_N
BYD3_k127_5421417_4	1288963.ADIS_1148	1.444e-131	421.0	COG0269@1|root,COG0269@2|Bacteria,4NHBV@976|Bacteroidetes	976|Bacteroidetes	G	Orotidine 5'-phosphate decarboxylase / HUMPS family	-	-	4.1.2.43	ko:K08093	ko00030,ko00680,ko01100,ko01120,ko01200,ko01230,map00030,map00680,map01100,map01120,map01200,map01230	M00345,M00580	R05338	RC00421,RC00422	ko00000,ko00001,ko00002,ko01000	-	-	-	OMPdecase
BYD3_k127_5421417_0	880070.Cycma_2899	3.851e-207	664.0	COG0613@1|root,COG0613@2|Bacteria,4NXQH@976|Bacteroidetes,47U5Z@768503|Cytophagia	976|Bacteroidetes	S	PHP domain protein	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_5421417_5	497965.Cyan7822_3721	1.213e-14	81.0	COG3652@1|root,COG3652@2|Bacteria,1GJH1@1117|Cyanobacteria,3KK9R@43988|Cyanothece	1117|Cyanobacteria	S	Domain of unknown function (DUF4142)	-	-	-	ko:K08995	-	-	-	-	ko00000	-	-	-	DUF4142
BYD3_k127_5421417_6	1123248.KB893315_gene3216	3.014e-06	53.0	2EQES@1|root,33I0R@2|Bacteria,4NY5D@976|Bacteroidetes,1IZVC@117747|Sphingobacteriia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_5434547_4	190650.CC_2028	2.814e-16	84.0	COG0793@1|root,COG0793@2|Bacteria,1R5YM@1224|Proteobacteria,2U35M@28211|Alphaproteobacteria,2KI5E@204458|Caulobacterales	204458|Caulobacterales	M	Peptidase family S41	-	-	3.4.21.102	ko:K03797	-	-	-	-	ko00000,ko01000,ko01002	-	-	-	Peptidase_S41
BYD3_k127_5434547_2	509635.N824_05160	8.974e-92	314.0	COG3214@1|root,COG3214@2|Bacteria,4NGF2@976|Bacteroidetes,1ISPP@117747|Sphingobacteriia	976|Bacteroidetes	S	Winged helix DNA-binding domain	-	-	-	-	-	-	-	-	-	-	-	-	HTH_42
BYD3_k127_5434547_1	1189612.A33Q_2236	4.747e-121	422.0	COG1629@1|root,COG1629@2|Bacteria,4NMTD@976|Bacteroidetes,47PTS@768503|Cytophagia	976|Bacteroidetes	P	CarboxypepD_reg-like domain	-	-	-	-	-	-	-	-	-	-	-	-	CarbopepD_reg_2,Plug
BYD3_k127_5434547_0	929703.KE386491_gene3582	5.63e-238	745.0	COG4108@1|root,COG4108@2|Bacteria,4NFEZ@976|Bacteroidetes,47JQE@768503|Cytophagia	976|Bacteroidetes	J	Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP	prfC	-	-	ko:K02837	-	-	-	-	ko00000,ko03012	-	-	-	GTP_EFTU,GTP_EFTU_D2,RF3_C
BYD3_k127_5434547_3	314285.KT71_06257	9.895e-40	156.0	28KF8@1|root,2ZA1G@2|Bacteria,1NZ2T@1224|Proteobacteria,1SQI9@1236|Gammaproteobacteria,1JAT9@118884|unclassified Gammaproteobacteria	1236|Gammaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_5437459_1	1237149.C900_04780	1.257e-250	782.0	COG0318@1|root,COG0318@2|Bacteria,4NFPF@976|Bacteroidetes,47K1E@768503|Cytophagia	976|Bacteroidetes	IQ	Acyl-CoA synthetase (AMP-forming) AMP-acid ligase II	-	-	6.2.1.3	ko:K01897	ko00061,ko00071,ko01100,ko01212,ko02024,ko03320,ko04146,ko04216,ko04714,ko04920,map00061,map00071,map01100,map01212,map02024,map03320,map04146,map04216,map04714,map04920	M00086	R01280	RC00004,RC00014	ko00000,ko00001,ko00002,ko01000,ko01004,ko04147	4.C.1.1	-	-	AMP-binding,AMP-binding_C
BYD3_k127_5437459_7	1237149.C900_04776	2.223e-38	148.0	COG4103@1|root,COG4103@2|Bacteria,4NUAN@976|Bacteroidetes,47R5X@768503|Cytophagia	976|Bacteroidetes	S	Tellurite resistance protein TerB	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_5437459_4	1237149.C900_04657	7.04e-157	508.0	COG0733@1|root,COG0733@2|Bacteria,4NGQ5@976|Bacteroidetes,47NFV@768503|Cytophagia	976|Bacteroidetes	U	Belongs to the sodium neurotransmitter symporter (SNF) (TC 2.A.22) family	-	-	-	ko:K03308	-	-	-	-	ko00000	2.A.22.4,2.A.22.5	-	-	SNF
BYD3_k127_5437459_2	1237149.C900_04771	3.703e-221	694.0	COG1057@1|root,COG1057@2|Bacteria,4NEIR@976|Bacteroidetes,47KX5@768503|Cytophagia	976|Bacteroidetes	H	Nicotinate-nucleotide adenylyltransferase	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_5437459_3	1237149.C900_01566	1.057e-160	518.0	COG1115@1|root,COG1115@2|Bacteria,4NDX7@976|Bacteroidetes,47JCJ@768503|Cytophagia	976|Bacteroidetes	E	PFAM Sodium alanine symporter family	-	-	-	ko:K03310	-	-	-	-	ko00000	2.A.25	-	-	Na_Ala_symp
BYD3_k127_5437459_5	1237149.C900_01568	2.433e-139	450.0	COG0010@1|root,COG0010@2|Bacteria,4NE01@976|Bacteroidetes,47KSG@768503|Cytophagia	976|Bacteroidetes	E	Belongs to the arginase family	speB	-	3.5.3.11	ko:K01480	ko00330,ko01100,map00330,map01100	M00133	R01157	RC00024,RC00329	ko00000,ko00001,ko00002,ko01000	-	-	-	Arginase
BYD3_k127_5437459_6	1237149.C900_01569	1.093e-38	150.0	COG2062@1|root,COG2062@2|Bacteria,4NQFM@976|Bacteroidetes,47R7I@768503|Cytophagia	976|Bacteroidetes	T	PFAM Phosphoglycerate mutase	sixA	-	-	ko:K08296	-	-	-	-	ko00000,ko01000	-	-	-	His_Phos_1
BYD3_k127_5437459_0	1237149.C900_01570	0.0	1093.0	COG0550@1|root,COG0550@2|Bacteria,4NF9S@976|Bacteroidetes,47K7C@768503|Cytophagia	976|Bacteroidetes	L	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone	topA	-	5.99.1.2	ko:K03168	-	-	-	-	ko00000,ko01000,ko03032,ko03400	-	-	-	Topoisom_bac,Toprim,Toprim_C_rpt
BYD3_k127_5441163_0	1239962.C943_01002	0.0	1723.0	COG0841@1|root,COG0841@2|Bacteria,4NDZG@976|Bacteroidetes,47JGB@768503|Cytophagia	976|Bacteroidetes	V	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family	-	-	-	ko:K03296	-	-	-	-	ko00000	2.A.6.2	-	-	ACR_tran
BYD3_k127_5446321_4	929562.Emtol_2212	1.355e-15	80.0	COG3828@1|root,COG3828@2|Bacteria,4NGR8@976|Bacteroidetes,47P1J@768503|Cytophagia	976|Bacteroidetes	S	Trehalose utilisation	-	-	-	ko:K09992	-	-	-	-	ko00000	-	-	-	ThuA
BYD3_k127_5446321_1	1380600.AUYN01000009_gene1868	0.0	1080.0	COG2133@1|root,COG3291@1|root,COG4654@1|root,COG2133@2|Bacteria,COG3291@2|Bacteria,COG4654@2|Bacteria,4PNA4@976|Bacteroidetes,1IK7X@117743|Flavobacteriia	976|Bacteroidetes	CG	Trehalose utilisation	-	-	-	ko:K08738	ko00920,ko01100,ko01120,ko01524,ko02020,ko04115,ko04210,ko04214,ko04215,ko04932,ko05010,ko05012,ko05014,ko05016,ko05134,ko05145,ko05152,ko05161,ko05164,ko05167,ko05168,ko05200,ko05210,ko05222,ko05416,map00920,map01100,map01120,map01524,map02020,map04115,map04210,map04214,map04215,map04932,map05010,map05012,map05014,map05016,map05134,map05145,map05152,map05161,map05164,map05167,map05168,map05200,map05210,map05222,map05416	M00595	R10151	RC03151,RC03152	ko00000,ko00001,ko00002	3.D.4.6	-	-	CBM_6,Cytochrom_C,GSDH,PKD,ThuA
BYD3_k127_5446321_3	1086011.HJ01_02500	4.592e-47	179.0	COG0494@1|root,COG4111@1|root,COG0494@2|Bacteria,COG4111@2|Bacteria,4NM0G@976|Bacteroidetes,1HZNP@117743|Flavobacteriia,2P02Q@237|Flavobacterium	976|Bacteroidetes	L	NUDIX domain	-	-	-	-	-	-	-	-	-	-	-	-	NUDIX
BYD3_k127_5446321_2	1237149.C900_04370	1.71e-178	575.0	COG1228@1|root,COG4538@1|root,COG1228@2|Bacteria,COG4538@2|Bacteria,4NGGD@976|Bacteroidetes,47R4K@768503|Cytophagia	976|Bacteroidetes	Q	Amidohydrolase family	-	-	-	-	-	-	-	-	-	-	-	-	Amidohydro_1,SnoaL_2
BYD3_k127_5446321_5	471854.Dfer_1698	2.586e-11	66.0	COG2197@1|root,COG2197@2|Bacteria,4NQVA@976|Bacteroidetes,47QIT@768503|Cytophagia	976|Bacteroidetes	K	Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain	-	-	-	-	-	-	-	-	-	-	-	-	GerE,Response_reg
BYD3_k127_5446321_0	929703.KE386491_gene712	0.0	1112.0	COG4206@1|root,COG4206@2|Bacteria,4NH06@976|Bacteroidetes,47MID@768503|Cytophagia	976|Bacteroidetes	H	TonB-dependent Receptor Plug Domain	-	-	-	-	-	-	-	-	-	-	-	-	CarbopepD_reg_2,Plug,TonB_dep_Rec
BYD3_k127_5468017_1	1121481.AUAS01000018_gene408	9.58e-72	248.0	COG2520@1|root,COG2520@2|Bacteria,4NNG5@976|Bacteroidetes,47PX7@768503|Cytophagia	976|Bacteroidetes	J	Methyltransferase FkbM domain	-	-	-	-	-	-	-	-	-	-	-	-	Methyltransf_21
BYD3_k127_5468017_0	313606.M23134_08164	4.544e-129	417.0	COG0463@1|root,COG0463@2|Bacteria,4NEZP@976|Bacteroidetes,47MB5@768503|Cytophagia	976|Bacteroidetes	M	Glycosyl transferase, family 2	-	-	-	-	-	-	-	-	-	-	-	-	Glyco_tranf_2_4
BYD3_k127_5468017_2	313606.M23134_08430	3.48e-66	235.0	COG0463@1|root,COG0463@2|Bacteria,4NGYU@976|Bacteroidetes,47XHY@768503|Cytophagia	976|Bacteroidetes	M	Glycosyl transferase family 2	-	-	-	ko:K12984	-	-	-	-	ko00000,ko01000,ko01003,ko01005,ko02000	4.D.1.3	GT2	-	Glycos_transf_2
BYD3_k127_5468017_3	743722.Sph21_1373	2.573e-59	211.0	COG1595@1|root,COG1595@2|Bacteria,4NNEM@976|Bacteroidetes,1IRWR@117747|Sphingobacteriia	976|Bacteroidetes	K	Belongs to the sigma-70 factor family. ECF subfamily	-	-	-	ko:K03088	-	-	-	-	ko00000,ko03021	-	-	-	Sigma70_r2,Sigma70_r4_2
BYD3_k127_5468017_4	1121904.ARBP01000009_gene4207	4.324e-45	180.0	COG0810@1|root,COG0810@2|Bacteria,4NSYT@976|Bacteroidetes,47W0H@768503|Cytophagia	976|Bacteroidetes	M	Gram-negative bacterial TonB protein C-terminal	-	-	-	-	-	-	-	-	-	-	-	-	CarbopepD_reg_2,TonB_C
BYD3_k127_5484825_1	1123248.KB893322_gene648	1.312e-176	556.0	COG1894@1|root,COG1894@2|Bacteria,4NHD2@976|Bacteroidetes,1IVX2@117747|Sphingobacteriia	976|Bacteroidetes	C	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain	-	-	1.6.5.3	ko:K00335	ko00190,ko01100,map00190,map01100	M00144	R11945	RC00061	ko00000,ko00001,ko00002,ko01000	3.D.1	-	-	Complex1_51K,NADH_4Fe-4S,SLBB
BYD3_k127_5484825_0	1266925.JHVX01000004_gene1249	0.0	1077.0	COG1034@1|root,COG1034@2|Bacteria,1P8MN@1224|Proteobacteria,2VJYV@28216|Betaproteobacteria,373XN@32003|Nitrosomonadales	28216|Betaproteobacteria	C	Molybdopterin oxidoreductase Fe4S4 domain	-	-	1.6.5.3	ko:K00336	ko00190,ko01100,map00190,map01100	M00144	R11945	RC00061	ko00000,ko00001,ko00002,ko01000	3.D.1	-	-	Fer2_4,Molybdop_Fe4S4,Molybdopterin,NADH-G_4Fe-4S_3
BYD3_k127_5484825_2	485918.Cpin_3819	5.38e-155	494.0	COG1005@1|root,COG1005@2|Bacteria,4NGK7@976|Bacteroidetes,1IVA3@117747|Sphingobacteriia	976|Bacteroidetes	C	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone	nuoH	-	1.6.5.3	ko:K00337	ko00190,ko01100,map00190,map01100	M00144	R11945	RC00061	ko00000,ko00001,ko00002,ko01000	3.D.1	-	-	NADHdh
BYD3_k127_550527_5	926549.KI421517_gene3921	6.818e-13	69.0	COG0159@1|root,COG0159@2|Bacteria,4NE21@976|Bacteroidetes,47JYN@768503|Cytophagia	976|Bacteroidetes	E	The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate	trpA	-	4.2.1.20	ko:K01695	ko00260,ko00400,ko01100,ko01110,ko01130,ko01230,map00260,map00400,map01100,map01110,map01130,map01230	M00023	R00674,R02340,R02722	RC00209,RC00210,RC00700,RC00701,RC02868	ko00000,ko00001,ko00002,ko01000	-	-	-	Trp_syntA
BYD3_k127_550527_0	1237149.C900_03304	6.191e-207	648.0	COG0133@1|root,COG0133@2|Bacteria,4NDWP@976|Bacteroidetes,47KSV@768503|Cytophagia	976|Bacteroidetes	E	The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine	trpB	-	4.2.1.20,5.3.1.24	ko:K01696,ko:K01817	ko00260,ko00400,ko01100,ko01110,ko01130,ko01230,map00260,map00400,map01100,map01110,map01130,map01230	M00023	R00674,R02340,R02722,R03509	RC00209,RC00210,RC00700,RC00701,RC00945,RC02868	ko00000,ko00001,ko00002,ko01000	-	-	-	PALP
BYD3_k127_550527_4	504472.Slin_5476	2.283e-55	201.0	COG0135@1|root,COG0135@2|Bacteria,4NNQ1@976|Bacteroidetes,47N69@768503|Cytophagia	976|Bacteroidetes	E	Belongs to the TrpF family	trpF	-	5.3.1.24	ko:K01817	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	M00023	R03509	RC00945	ko00000,ko00001,ko00002,ko01000	-	-	-	PRAI
BYD3_k127_550527_2	1279009.ADICEAN_04128	7.993e-112	368.0	COG0134@1|root,COG0134@2|Bacteria,4NFJT@976|Bacteroidetes,47JRX@768503|Cytophagia	976|Bacteroidetes	E	Belongs to the TrpC family	trpC	GO:0003674,GO:0003824,GO:0004425,GO:0016829,GO:0016830,GO:0016831	4.1.1.48	ko:K01609	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	M00023	R03508	RC00944	ko00000,ko00001,ko00002,ko01000	-	-	-	IGPS
BYD3_k127_550527_1	1237149.C900_03301	1.908e-145	467.0	COG0547@1|root,COG0547@2|Bacteria,4NH2J@976|Bacteroidetes,47KKR@768503|Cytophagia	976|Bacteroidetes	E	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)	trpD	GO:0000162,GO:0003674,GO:0003824,GO:0004048,GO:0006082,GO:0006520,GO:0006568,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009308,GO:0009309,GO:0009987,GO:0016053,GO:0016740,GO:0016757,GO:0016763,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0042401,GO:0042430,GO:0042435,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046219,GO:0046394,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607	2.4.2.18,4.1.3.27	ko:K00766,ko:K13497	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	M00023	R00985,R00986,R01073	RC00010,RC00440,RC02148,RC02414	ko00000,ko00001,ko00002,ko01000	-	-	-	Glycos_trans_3N,Glycos_transf_3
BYD3_k127_550527_3	471854.Dfer_3791	6.879e-79	267.0	COG0512@1|root,COG0512@2|Bacteria,4NE4I@976|Bacteroidetes,47JZQ@768503|Cytophagia	976|Bacteroidetes	EH	TIGRFAM glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase	pabA	-	4.1.3.27	ko:K01658	ko00400,ko00405,ko01100,ko01110,ko01130,ko01230,ko02024,ko02025,map00400,map00405,map01100,map01110,map01130,map01230,map02024,map02025	M00023	R00985,R00986	RC00010,RC02148,RC02414	ko00000,ko00001,ko00002,ko01000	-	-	-	GATase
BYD3_k127_5510375_4	1121904.ARBP01000003_gene6312	0.000928	50.0	COG0457@1|root,COG2207@1|root,COG5616@1|root,COG0457@2|Bacteria,COG2207@2|Bacteria,COG5616@2|Bacteria,4NFW7@976|Bacteroidetes	976|Bacteroidetes	K	COGs COG5616 integral membrane protein	-	-	-	-	-	-	-	-	-	-	-	-	HTH_18,TPR_8
BYD3_k127_5510375_3	641524.ADICYQ_4950	1.508e-25	111.0	COG1416@1|root,COG1416@2|Bacteria,4NUNC@976|Bacteroidetes	976|Bacteroidetes	S	PFAM DsrE DsrF-like family	-	-	-	ko:K09004	-	-	-	-	ko00000	-	-	-	DrsE
BYD3_k127_5510375_0	700598.Niako_6696	3.88e-90	308.0	2CEJ5@1|root,2Z7RK@2|Bacteria,4NGWQ@976|Bacteroidetes,1IS7V@117747|Sphingobacteriia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	Phenol_MetA_deg
BYD3_k127_5510375_2	1123248.KB893386_gene1950	4.397e-59	212.0	COG1416@1|root,COG1416@2|Bacteria,4NH85@976|Bacteroidetes,1IX7M@117747|Sphingobacteriia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_5510375_1	926549.KI421517_gene4122	3.763e-68	236.0	COG3507@1|root,COG3507@2|Bacteria,4NEWE@976|Bacteroidetes,47MJY@768503|Cytophagia	976|Bacteroidetes	G	Belongs to the glycosyl hydrolase 43 family	xynB	-	-	-	-	-	-	-	-	-	-	-	Glyco_hydro_43
BYD3_k127_5510616_1	1227739.Hsw_1553	2.826e-37	160.0	COG0682@1|root,COG0682@2|Bacteria	2|Bacteria	M	lipoprotein biosynthetic process	-	-	-	-	-	-	-	-	-	-	-	-	LGT
BYD3_k127_5510616_0	1173026.Glo7428_1510	4.802e-59	217.0	2BWJ3@1|root,2Z7IQ@2|Bacteria,1G3WZ@1117|Cyanobacteria	1117|Cyanobacteria	S	Sulfotransferase family	-	-	-	-	-	-	-	-	-	-	-	-	Sulfotransfer_3
BYD3_k127_5510616_2	1045004.OKIT_0148	4.038e-05	53.0	COG0332@1|root,COG0332@2|Bacteria,1TP0K@1239|Firmicutes,4HATK@91061|Bacilli,4AX0C@81850|Leuconostocaceae	91061|Bacilli	I	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids	fabH	-	2.3.1.180	ko:K00648	ko00061,ko01100,ko01212,map00061,map01100,map01212	M00082,M00083	R10707	RC00004,RC02729,RC02888	ko00000,ko00001,ko00002,ko01000,ko01004	-	-	-	ACP_syn_III,ACP_syn_III_C
BYD3_k127_5515249_2	1237149.C900_01521	8.109e-93	307.0	COG0334@1|root,COG0334@2|Bacteria,4NEBH@976|Bacteroidetes,47MQD@768503|Cytophagia	976|Bacteroidetes	E	Belongs to the Glu Leu Phe Val dehydrogenases family	gdh	GO:0003674,GO:0003824,GO:0004353,GO:0004354,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006536,GO:0006537,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009986,GO:0009987,GO:0016053,GO:0016491,GO:0016638,GO:0016639,GO:0019752,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0055114,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607	1.4.1.4	ko:K00262	ko00220,ko00250,ko00910,ko01100,map00220,map00250,map00910,map01100	-	R00248	RC00006,RC02799	ko00000,ko00001,ko01000	-	-	-	ELFV_dehydrog,ELFV_dehydrog_N
BYD3_k127_5515249_6	1305737.JAFX01000001_gene1522	4.485e-47	175.0	COG2391@1|root,COG2391@2|Bacteria,4NQ9C@976|Bacteroidetes,47P92@768503|Cytophagia	976|Bacteroidetes	S	PFAM YeeE YedE family (DUF395)	-	-	-	ko:K07112	-	-	-	-	ko00000	-	-	-	Sulf_transp
BYD3_k127_5515249_3	172045.KS04_02100	1.195e-81	274.0	COG2391@1|root,COG2391@2|Bacteria,4NM6E@976|Bacteroidetes,1I190@117743|Flavobacteriia,34PV2@308865|Elizabethkingia	976|Bacteroidetes	S	Sulphur transport	-	-	-	ko:K07112	-	-	-	-	ko00000	-	-	-	Sulf_transp
BYD3_k127_5515249_1	485918.Cpin_0657	1.636e-119	388.0	COG0345@1|root,COG0345@2|Bacteria,4NE6F@976|Bacteroidetes,1IR2E@117747|Sphingobacteriia	976|Bacteroidetes	E	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline	proC	-	1.5.1.2	ko:K00286	ko00330,ko01100,ko01110,ko01130,ko01230,map00330,map01100,map01110,map01130,map01230	M00015	R01248,R01251,R03291,R03293	RC00054,RC00083	ko00000,ko00001,ko00002,ko01000	-	-	-	F420_oxidored,P5CR_dimer
BYD3_k127_5515249_5	313606.M23134_01760	7.507e-58	218.0	COG5002@1|root,COG5002@2|Bacteria,4PKXY@976|Bacteroidetes	976|Bacteroidetes	T	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)	-	-	-	-	-	-	-	-	-	-	-	-	GAF,GAF_2,HATPase_c,HisKA,PAS,PAS_3,PAS_9
BYD3_k127_5515249_7	1453500.AT05_05690	2.205e-24	106.0	COG0642@1|root,COG0642@2|Bacteria,4NJVF@976|Bacteroidetes,1IKU0@117743|Flavobacteriia	976|Bacteroidetes	T	His Kinase A (phosphoacceptor) domain	-	-	-	-	-	-	-	-	-	-	-	-	HATPase_c,HisKA,Response_reg
BYD3_k127_5515249_0	1237149.C900_03862	1.409e-207	651.0	COG2256@1|root,COG2256@2|Bacteria,4NEV8@976|Bacteroidetes,47JM9@768503|Cytophagia	976|Bacteroidetes	L	PFAM MgsA AAA ATPase C terminal	ycaJ	-	-	ko:K07478	-	-	-	-	ko00000	-	-	-	AAA,AAA_assoc_2,MgsA_C,RuvB_N
BYD3_k127_5515249_4	1121904.ARBP01000028_gene1657	6.468e-78	273.0	COG2304@1|root,COG2304@2|Bacteria,4NER3@976|Bacteroidetes,47JA7@768503|Cytophagia	976|Bacteroidetes	S	oxidoreductase activity	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_5570261_2	700598.Niako_5413	9.59e-12	67.0	2C3WA@1|root,2Z8P1@2|Bacteria,4NW8R@976|Bacteroidetes	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_5570261_1	929703.KE386491_gene1349	5.267e-152	488.0	COG2220@1|root,COG2220@2|Bacteria,4NI69@976|Bacteroidetes,47K8S@768503|Cytophagia	976|Bacteroidetes	S	Beta-lactamase superfamily domain	-	-	-	-	-	-	-	-	-	-	-	-	Lactamase_B_2
BYD3_k127_5570261_0	1121904.ARBP01000024_gene6651	0.0	1300.0	COG1409@1|root,COG4775@1|root,COG1409@2|Bacteria,COG4775@2|Bacteria,4NI9F@976|Bacteroidetes,47TSW@768503|Cytophagia	976|Bacteroidetes	M	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_5615641_2	714943.Mucpa_5835	1.4e-49	179.0	COG5478@1|root,COG5478@2|Bacteria,4NPSX@976|Bacteroidetes,1IXAG@117747|Sphingobacteriia	976|Bacteroidetes	S	Low affinity iron permease	-	-	-	-	-	-	-	-	-	-	-	-	Iron_permease
BYD3_k127_5615641_1	880070.Cycma_4063	1.548e-218	685.0	COG0673@1|root,COG0673@2|Bacteria,4NF3G@976|Bacteroidetes,47KSJ@768503|Cytophagia	976|Bacteroidetes	S	Oxidoreductase family, NAD-binding Rossmann fold	-	-	-	-	-	-	-	-	-	-	-	-	GFO_IDH_MocA
BYD3_k127_5615641_0	1123248.KB893359_gene2156	0.0	1076.0	COG1413@1|root,COG2133@1|root,COG3474@1|root,COG1413@2|Bacteria,COG2133@2|Bacteria,COG3474@2|Bacteria,4NGAU@976|Bacteroidetes,1IWXQ@117747|Sphingobacteriia	976|Bacteroidetes	CG	Membrane-bound dehydrogenase domain	-	-	-	-	-	-	-	-	-	-	-	-	Cytochrom_C
BYD3_k127_5615922_3	1237149.C900_01990	4.109e-59	212.0	COG0664@1|root,COG0745@1|root,COG0664@2|Bacteria,COG0745@2|Bacteria,4NFB1@976|Bacteroidetes,47JY7@768503|Cytophagia	976|Bacteroidetes	K	Transcriptional regulator, Crp Fnr family	crp	-	-	-	-	-	-	-	-	-	-	-	HTH_Crp_2,Response_reg,cNMP_binding
BYD3_k127_5615922_4	1288963.ADIS_2303	1.489e-25	115.0	COG2836@1|root,COG2836@2|Bacteria,4NF84@976|Bacteroidetes,47QDS@768503|Cytophagia	976|Bacteroidetes	S	Cytochrome C biogenesis protein transmembrane region	-	-	-	ko:K09792	-	-	-	-	ko00000	-	-	-	DsbD_2
BYD3_k127_5615922_5	1237149.C900_03362	1.437e-22	103.0	COG3198@1|root,COG3198@2|Bacteria,4PPZ3@976|Bacteroidetes,47RV1@768503|Cytophagia	976|Bacteroidetes	S	FixH	ccoH	-	-	ko:K09926	-	-	-	-	ko00000	-	-	-	FixH
BYD3_k127_5615922_1	1237149.C900_03363	3.766e-210	662.0	COG0348@1|root,COG0348@2|Bacteria,4NFDN@976|Bacteroidetes,47KT1@768503|Cytophagia	976|Bacteroidetes	C	TIGRFAM cytochrome c oxidase accessory protein	ccoG	-	-	-	-	-	-	-	-	-	-	-	Fer4_18,Fer4_5,FixG_C
BYD3_k127_5615922_2	1237149.C900_03364	7.353e-70	247.0	COG2010@1|root,COG2010@2|Bacteria,4NFMJ@976|Bacteroidetes,47PY8@768503|Cytophagia	976|Bacteroidetes	C	TIGRFAM cytochrome c oxidase, cbb3-type, subunit III	ccoP	-	-	ko:K00406	ko00190,ko01100,ko02020,map00190,map01100,map02020	M00156	-	-	ko00000,ko00001,ko00002	3.D.4.3	-	-	Cytochrome_CBB3,FixP_N
BYD3_k127_5615922_6	926559.JoomaDRAFT_1811	1e-10	64.0	2E7S7@1|root,3327D@2|Bacteria,4NUQB@976|Bacteroidetes,1I51Y@117743|Flavobacteriia	976|Bacteroidetes	S	PFAM Cbb3-type cytochrome oxidase component FixQ	ccoQ	-	-	-	-	-	-	-	-	-	-	-	FixQ
BYD3_k127_5615922_0	1237149.C900_03366	0.0	1206.0	COG2993@1|root,COG3278@1|root,COG2993@2|Bacteria,COG3278@2|Bacteria,4NEGM@976|Bacteroidetes,47MI5@768503|Cytophagia	976|Bacteroidetes	C	Belongs to the heme-copper respiratory oxidase family	ccoN	-	1.9.3.1	ko:K15862	ko00190,ko01100,ko02020,map00190,map01100,map02020	M00156	-	-	ko00000,ko00001,ko00002,ko01000	3.D.4.3	-	-	COX1,FixO
BYD3_k127_5645651_0	643867.Ftrac_1996	0.0	1077.0	COG0341@1|root,COG0342@1|root,COG0341@2|Bacteria,COG0342@2|Bacteria,4NE1X@976|Bacteroidetes,47JV4@768503|Cytophagia	976|Bacteroidetes	U	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA	secD	-	-	ko:K03072,ko:K12257	ko02024,ko03060,ko03070,map02024,map03060,map03070	M00335	-	-	ko00000,ko00001,ko00002,ko02044	2.A.6.4,3.A.5.2,3.A.5.7	-	-	SecD_SecF,Sec_GG
BYD3_k127_5645651_1	1124780.ANNU01000010_gene3631	5.216e-78	265.0	COG0572@1|root,COG0572@2|Bacteria,4NEEC@976|Bacteroidetes,47P8Z@768503|Cytophagia	976|Bacteroidetes	F	Belongs to the uridine kinase family	udk	-	2.7.1.48	ko:K00876	ko00240,ko00983,ko01100,map00240,map00983,map01100	-	R00513,R00516,R00517,R00962,R00964,R00967,R00968,R00970,R01548,R01549,R01880,R02091,R02096,R02097,R02327,R02332,R02371,R02372,R08232	RC00002,RC00017	ko00000,ko00001,ko01000	-	-	-	PRK
BYD3_k127_5645651_2	1235803.C825_01932	7.719e-44	162.0	COG0127@1|root,COG0127@2|Bacteria,4NM42@976|Bacteroidetes,2FP46@200643|Bacteroidia,22XN1@171551|Porphyromonadaceae	976|Bacteroidetes	F	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions	rdgB	GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009141,GO:0009143,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046434,GO:0046483,GO:0046700,GO:0047429,GO:0055086,GO:0071704,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901575,GO:1901576	3.6.1.66	ko:K02428	ko00230,map00230	-	R00426,R00720,R01855,R02100,R02720,R03531	RC00002	ko00000,ko00001,ko01000	-	-	-	Ham1p_like
BYD3_k127_5646777_0	616991.JPOO01000003_gene971	0.0	1189.0	COG1413@1|root,COG2133@1|root,COG3241@1|root,COG3250@1|root,COG3828@1|root,COG1413@2|Bacteria,COG2133@2|Bacteria,COG3241@2|Bacteria,COG3250@2|Bacteria,COG3828@2|Bacteria,4NQ6P@976|Bacteroidetes,1I34Z@117743|Flavobacteriia	976|Bacteroidetes	C	PFAM Copper binding proteins, plastocyanin azurin family	-	-	-	-	-	-	-	-	-	-	-	-	BetaGal_dom4_5,Copper-bind,ThuA
BYD3_k127_5646777_1	143224.JQMD01000002_gene1627	2.421e-127	414.0	COG1082@1|root,COG1082@2|Bacteria,4NI7Y@976|Bacteroidetes,1I0CB@117743|Flavobacteriia	976|Bacteroidetes	G	Xylose isomerase-like TIM barrel	-	-	5.1.3.30,5.1.3.31	ko:K18910	-	-	R10817,R10818	RC03111,RC03283	ko00000,ko01000	-	-	-	AP_endonuc_2
BYD3_k127_5646777_2	616991.JPOO01000003_gene969	6.851e-106	345.0	COG0673@1|root,COG0673@2|Bacteria,4NEJM@976|Bacteroidetes,1HZQQ@117743|Flavobacteriia	976|Bacteroidetes	S	Oxidoreductase family, NAD-binding Rossmann fold	-	-	-	-	-	-	-	-	-	-	-	-	GFO_IDH_MocA
BYD3_k127_5650148_3	1123276.KB893248_gene14	9.97e-114	371.0	COG1231@1|root,COG1231@2|Bacteria,4PMAQ@976|Bacteroidetes,47N7X@768503|Cytophagia	976|Bacteroidetes	E	Protein of unknown function (DUF1593)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1593
BYD3_k127_5650148_8	1392498.JQLH01000001_gene1193	5.49e-10	65.0	2ASGC@1|root,31HWH@2|Bacteria,4NR0Q@976|Bacteroidetes,1I25V@117743|Flavobacteriia,2PHMD@252356|Maribacter	976|Bacteroidetes	S	Excinuclease ABC subunit B	-	-	-	-	-	-	-	-	-	-	-	-	TerB
BYD3_k127_5650148_5	1121904.ARBP01000004_gene1023	9.573e-35	136.0	COG1695@1|root,COG1695@2|Bacteria,4NQJP@976|Bacteroidetes,47QWB@768503|Cytophagia	2|Bacteria	K	Transcriptional regulator PadR-like family	-	-	-	-	-	-	-	-	-	-	-	-	PadR
BYD3_k127_5650148_2	1121904.ARBP01000002_gene7252	4.866e-173	575.0	COG0577@1|root,COG0577@2|Bacteria,4NDUK@976|Bacteroidetes,47JJN@768503|Cytophagia	976|Bacteroidetes	V	FtsX-like permease family	-	-	-	ko:K02004	-	M00258	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	FtsX,MacB_PCD
BYD3_k127_5650148_4	1237149.C900_04499	1.115e-52	192.0	COG1280@1|root,COG1280@2|Bacteria,4NUV7@976|Bacteroidetes,47SDU@768503|Cytophagia	976|Bacteroidetes	E	LysE type translocator	-	-	-	-	-	-	-	-	-	-	-	-	LysE
BYD3_k127_5650148_1	761193.Runsl_4249	1.939e-173	561.0	COG2272@1|root,COG2272@2|Bacteria,4NF5N@976|Bacteroidetes,47MRG@768503|Cytophagia	976|Bacteroidetes	I	Carboxylesterase family	-	-	-	ko:K03929	-	-	-	-	ko00000,ko01000	-	CE10	-	COesterase
BYD3_k127_5650148_6	1122605.KB893643_gene850	1.635e-25	111.0	COG2764@1|root,COG2764@2|Bacteria	2|Bacteria	E	glyoxalase bleomycin resistance protein dioxygenase	-	-	-	ko:K04750	-	-	-	-	ko00000	-	-	-	Glyoxalase
BYD3_k127_5650148_0	1121904.ARBP01000004_gene1059	9.921e-281	884.0	COG0577@1|root,COG0577@2|Bacteria,4NDUK@976|Bacteroidetes,47NTJ@768503|Cytophagia	976|Bacteroidetes	V	MacB-like periplasmic core domain	-	-	-	ko:K02004	-	M00258	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	FtsX,MacB_PCD
BYD3_k127_5650148_7	509635.N824_26535	2.748e-19	89.0	COG3590@1|root,COG3590@2|Bacteria,4NKGB@976|Bacteroidetes,1IUS0@117747|Sphingobacteriia	976|Bacteroidetes	O	peptidase	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_5661695_0	1168289.AJKI01000026_gene1376	3.718e-246	778.0	COG3973@1|root,COG3973@2|Bacteria,4NITV@976|Bacteroidetes,2FPMX@200643|Bacteroidia	976|Bacteroidetes	L	COG COG3973 Superfamily I DNA and RNA helicases	helD	-	3.6.4.12	ko:K03657	ko03420,ko03430,map03420,map03430	-	-	-	ko00000,ko00001,ko01000,ko03400	-	-	-	AAA_19,UvrD-helicase,UvrD_C,UvrD_C_2
BYD3_k127_5661695_4	1086011.HJ01_01597	1.838e-82	280.0	COG1018@1|root,COG1018@2|Bacteria,4NM4J@976|Bacteroidetes,1I1RH@117743|Flavobacteriia,2NZXX@237|Flavobacterium	976|Bacteroidetes	C	FAD-binding domain	-	-	-	-	-	-	-	-	-	-	-	-	FAD_binding_6,FAD_binding_8,NAD_binding_1
BYD3_k127_5661695_10	504472.Slin_0983	9.036e-11	62.0	COG2259@1|root,COG2259@2|Bacteria,4P48I@976|Bacteroidetes	976|Bacteroidetes	S	DoxX	-	-	-	-	-	-	-	-	-	-	-	-	DoxX
BYD3_k127_5661695_6	760192.Halhy_4948	2.308e-33	130.0	COG2259@1|root,COG2259@2|Bacteria,4P48I@976|Bacteroidetes	976|Bacteroidetes	S	DoxX	-	-	-	-	-	-	-	-	-	-	-	-	DoxX
BYD3_k127_5661695_5	313606.M23134_03613	1.56e-79	290.0	COG2208@1|root,COG2208@2|Bacteria,4NYPG@976|Bacteroidetes,47UHH@768503|Cytophagia	976|Bacteroidetes	KT	Sigma factor PP2C-like phosphatases	-	-	-	-	-	-	-	-	-	-	-	-	7TMR-DISMED2,7TMR-DISM_7TM,SpoIIE
BYD3_k127_5661695_9	1345023.M467_01520	6.738e-18	98.0	COG0642@1|root,COG5000@1|root,COG2205@2|Bacteria,COG5000@2|Bacteria,1V10X@1239|Firmicutes,4H9UD@91061|Bacilli	91061|Bacilli	T	Histidine kinase	yclK	-	-	-	-	-	-	-	-	-	-	-	HAMP,HATPase_c,HisKA
BYD3_k127_5661695_1	643867.Ftrac_0656	2.713e-237	743.0	COG2939@1|root,COG2939@2|Bacteria,4NF48@976|Bacteroidetes,47JPR@768503|Cytophagia	976|Bacteroidetes	E	PFAM Serine carboxypeptidase	-	-	-	-	-	-	-	-	-	-	-	-	Peptidase_S10
BYD3_k127_5661695_2	700598.Niako_3669	6.284e-116	385.0	COG1502@1|root,COG1502@2|Bacteria,4P0CZ@976|Bacteroidetes,1J0D9@117747|Sphingobacteriia	976|Bacteroidetes	I	Phospholipase D. Active site motifs.	-	-	-	ko:K06131	ko00564,ko01100,map00564,map01100	-	R07390	RC00017	ko00000,ko00001,ko01000	-	-	-	PLDc_2
BYD3_k127_5661695_3	1123248.KB893316_gene4610	1.55e-111	371.0	COG1988@1|root,COG1988@2|Bacteria,4NFBT@976|Bacteroidetes,1IYQQ@117747|Sphingobacteriia	976|Bacteroidetes	S	LexA-binding, inner membrane-associated putative hydrolase	-	-	-	ko:K07038	-	-	-	-	ko00000	-	-	-	YdjM
BYD3_k127_5661695_8	1196028.ALEF01000035_gene1024	1.074e-20	104.0	COG2353@1|root,COG2353@2|Bacteria,1V1NX@1239|Firmicutes,4HFXF@91061|Bacilli,4C6QC@84406|Virgibacillus	91061|Bacilli	S	YceI-like domain	-	-	-	-	-	-	-	-	-	-	-	-	YceI
BYD3_k127_5661695_7	1250232.JQNJ01000001_gene3602	5.836e-29	130.0	COG4977@1|root,COG4977@2|Bacteria,4PP1N@976|Bacteroidetes	976|Bacteroidetes	K	helix_turn_helix, arabinose operon control protein	-	-	-	-	-	-	-	-	-	-	-	-	HTH_18
BYD3_k127_5676196_4	1408813.AYMG01000001_gene3502	2.674e-87	293.0	COG0770@1|root,COG0770@2|Bacteria,4NDWD@976|Bacteroidetes,1IQA5@117747|Sphingobacteriia	976|Bacteroidetes	M	Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein	murF	-	6.3.2.10	ko:K01929	ko00300,ko00550,ko01100,ko01502,map00300,map00550,map01100,map01502	-	R04573,R04617	RC00064,RC00141	ko00000,ko00001,ko01000,ko01011	-	-	-	Mur_ligase,Mur_ligase_C,Mur_ligase_M
BYD3_k127_5676196_1	1237149.C900_01735	1.652e-189	618.0	COG2931@1|root,COG2931@2|Bacteria,4NFV5@976|Bacteroidetes,47MFU@768503|Cytophagia	976|Bacteroidetes	Q	Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella	-	-	-	-	-	-	-	-	-	-	-	-	VCBS
BYD3_k127_5676196_5	1121904.ARBP01000002_gene6990	2.835e-70	244.0	COG0637@1|root,COG0637@2|Bacteria,4NEEH@976|Bacteroidetes,47XKJ@768503|Cytophagia	976|Bacteroidetes	S	HAD-hyrolase-like	pgmB	-	-	-	-	-	-	-	-	-	-	-	HAD_2
BYD3_k127_5676196_9	1121904.ARBP01000009_gene4183	1.541e-33	130.0	COG0227@1|root,COG0227@2|Bacteria,4NS7Q@976|Bacteroidetes,47R5P@768503|Cytophagia	976|Bacteroidetes	J	Belongs to the bacterial ribosomal protein bL28 family	rpmB	GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904	-	ko:K02902	ko03010,map03010	M00178	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_L28
BYD3_k127_5676196_10	445961.IW15_21660	1.916e-26	108.0	COG0267@1|root,COG0267@2|Bacteria,4NURM@976|Bacteroidetes,1I55D@117743|Flavobacteriia,3ZST0@59732|Chryseobacterium	976|Bacteroidetes	J	Belongs to the bacterial ribosomal protein bL33 family	rpmG	-	-	ko:K02913	ko03010,map03010	M00178	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_L33
BYD3_k127_5676196_11	1237149.C900_01753	4.765e-16	78.0	2E359@1|root,32P2Z@2|Bacteria,4NWAD@976|Bacteroidetes,47SNB@768503|Cytophagia	976|Bacteroidetes	S	Domain of unknown function (DUF4295)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4295
BYD3_k127_5676196_3	1237149.C900_01754	3.999e-163	517.0	COG0552@1|root,COG0552@2|Bacteria,4NE9Z@976|Bacteroidetes,47JVI@768503|Cytophagia	976|Bacteroidetes	U	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC)	ftsY	-	-	ko:K03110	ko02024,ko03060,ko03070,map02024,map03060,map03070	M00335	-	-	ko00000,ko00001,ko00002,ko02044	3.A.5.1,3.A.5.2,3.A.5.7	-	-	SRP54,SRP54_N
BYD3_k127_5676196_6	1237149.C900_01757	1.441e-49	184.0	28JHY@1|root,2Z9BE@2|Bacteria,4NVN1@976|Bacteroidetes,47SUR@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_5676196_12	385682.AFSL01000096_gene590	5.279e-05	54.0	2EKJZ@1|root,33E9V@2|Bacteria,4NXVU@976|Bacteroidetes,2FVUN@200643|Bacteroidia,3XK8V@558415|Marinilabiliaceae	976|Bacteroidetes	S	COG NOG30522 non supervised orthologous group	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_5676196_0	1237149.C900_01759	1.505e-219	687.0	COG0621@1|root,COG0621@2|Bacteria,4NEJK@976|Bacteroidetes,47JJ2@768503|Cytophagia	976|Bacteroidetes	J	Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12	rimO	-	2.8.4.4	ko:K14441	-	-	R10652	RC00003,RC03217	ko00000,ko01000,ko03009	-	-	-	Radical_SAM,TRAM,UPF0004
BYD3_k127_5676196_2	643867.Ftrac_1928	2.258e-171	552.0	COG4365@1|root,COG4365@2|Bacteria,4NGCF@976|Bacteroidetes,47JYH@768503|Cytophagia	976|Bacteroidetes	S	Belongs to the BshC family	bshC	-	-	ko:K22136	-	-	-	-	ko00000	-	-	-	BshC
BYD3_k127_5676196_8	468059.AUHA01000002_gene697	2.138e-44	168.0	COG0212@1|root,COG0212@2|Bacteria,4NM97@976|Bacteroidetes,1IT2P@117747|Sphingobacteriia	976|Bacteroidetes	H	5-formyltetrahydrofolate cyclo-ligase family	ygfA	-	6.3.3.2	ko:K01934	ko00670,ko01100,map00670,map01100	-	R02301	RC00183	ko00000,ko00001,ko01000	-	-	-	5-FTHF_cyc-lig
BYD3_k127_5676196_7	1123057.P872_07875	9.738e-48	172.0	COG2957@1|root,COG2957@2|Bacteria,4NGF8@976|Bacteroidetes,47KQQ@768503|Cytophagia	976|Bacteroidetes	E	Belongs to the agmatine deiminase family	aguA	-	3.5.3.12	ko:K10536	ko00330,ko01100,map00330,map01100	-	R01416	RC00177	ko00000,ko00001,ko01000	-	-	-	PAD_porph
BYD3_k127_5710750_2	504472.Slin_0936	6.052e-74	255.0	COG0577@1|root,COG0577@2|Bacteria,4NDUK@976|Bacteroidetes,47JJN@768503|Cytophagia	976|Bacteroidetes	V	FtsX-like permease family	-	-	-	-	-	-	-	-	-	-	-	-	FtsX,MacB_PCD
BYD3_k127_5710750_0	926549.KI421517_gene1092	1.451e-192	620.0	COG3420@1|root,COG3420@2|Bacteria,4P1XP@976|Bacteroidetes,47UIA@768503|Cytophagia	976|Bacteroidetes	P	Parallel beta-helix repeats	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_5710750_1	1123277.KB893181_gene2250	1.237e-175	558.0	COG0477@1|root,COG2814@2|Bacteria,4NFM7@976|Bacteroidetes,47N08@768503|Cytophagia	976|Bacteroidetes	EGP	Major facilitator superfamily	tetA	-	-	ko:K08151	-	M00668	-	-	ko00000,ko00002,ko01504,ko02000	2.A.1.2.38,2.A.1.2.39,2.A.1.2.4,2.A.1.2.41,2.A.1.2.68,2.A.1.2.75	-	-	MFS_1,Sugar_tr
BYD3_k127_5712766_1	700598.Niako_4443	1.094e-67	239.0	COG2227@1|root,COG2227@2|Bacteria,4PKUR@976|Bacteroidetes,1J0TH@117747|Sphingobacteriia	976|Bacteroidetes	H	Thiopurine S-methyltransferase (TPMT)	-	-	-	-	-	-	-	-	-	-	-	-	Methyltransf_23,Methyltransf_25,Methyltransf_31
BYD3_k127_5712766_2	866536.Belba_2768	2.458e-17	87.0	COG3795@1|root,COG3795@2|Bacteria,4NPPF@976|Bacteroidetes,47SU4@768503|Cytophagia	976|Bacteroidetes	S	DoxX-like family	-	-	-	-	-	-	-	-	-	-	-	-	DoxX_2
BYD3_k127_5712766_0	487796.Flav2ADRAFT_1402	1.579e-201	637.0	COG2133@1|root,COG2133@2|Bacteria,4NDV1@976|Bacteroidetes,1HYQE@117743|Flavobacteriia	976|Bacteroidetes	G	L-sorbosone dehydrogenase	-	-	-	-	-	-	-	-	-	-	-	-	Cytochrome_CBB3,GSDH
BYD3_k127_5712766_3	504472.Slin_2160	4.026e-10	67.0	COG4099@1|root,COG4099@2|Bacteria,4NFSH@976|Bacteroidetes,47M41@768503|Cytophagia	976|Bacteroidetes	S	Phospholipase	-	-	-	-	-	-	-	-	-	-	-	-	Abhydrolase_2,DLH,Esterase,Peptidase_S9
BYD3_k127_5737297_0	1237149.C900_04407	4.72e-276	868.0	COG1752@1|root,COG1752@2|Bacteria,4NF97@976|Bacteroidetes,47KND@768503|Cytophagia	976|Bacteroidetes	S	Esterase of the alpha-beta hydrolase superfamily	-	-	-	-	-	-	-	-	-	-	-	-	Patatin
BYD3_k127_5737297_1	1237149.C900_00286	1.839e-240	780.0	COG1074@1|root,COG1074@2|Bacteria,4NEX4@976|Bacteroidetes,47KES@768503|Cytophagia	976|Bacteroidetes	L	Belongs to the helicase family. UvrD subfamily	addA	-	-	-	-	-	-	-	-	-	-	-	Cas_Cas4,PDDEXK_1,UvrD-helicase,UvrD_C
BYD3_k127_5737297_2	883096.HMPREF9699_00083	3.177e-15	76.0	2E4AP@1|root,32Z6C@2|Bacteria,4NWDP@976|Bacteroidetes,1I55P@117743|Flavobacteriia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_5755815_3	1237149.C900_01184	5.485e-27	115.0	COG2755@1|root,COG2755@2|Bacteria,4NGTK@976|Bacteroidetes,47NWX@768503|Cytophagia	976|Bacteroidetes	E	GDSL family lipolytic protein	-	-	-	-	-	-	-	-	-	-	-	-	Lipase_GDSL
BYD3_k127_5755815_2	1121373.KB903621_gene1833	4.171e-27	115.0	COG0526@1|root,COG0607@1|root,COG0526@2|Bacteria,COG0607@2|Bacteria,4NUPH@976|Bacteroidetes,47PJB@768503|Cytophagia	976|Bacteroidetes	OP	COGs COG0607 Rhodanese-related sulfurtransferase	glpE	-	-	-	-	-	-	-	-	-	-	-	Rhodanese,Thioredoxin
BYD3_k127_5755815_1	388413.ALPR1_15489	5.804e-62	222.0	COG1434@1|root,COG1434@2|Bacteria,4NNYV@976|Bacteroidetes,47PRX@768503|Cytophagia	976|Bacteroidetes	S	PFAM DUF218 domain	-	-	-	-	-	-	-	-	-	-	-	-	DUF218
BYD3_k127_5755815_0	1237149.C900_05256	1.348e-146	474.0	COG1131@1|root,COG1131@2|Bacteria,4NHPD@976|Bacteroidetes,47KQD@768503|Cytophagia	976|Bacteroidetes	V	ABC-2 type transporter	-	-	-	-	-	-	-	-	-	-	-	-	ABC2_membrane,ABC_tran,TerB
BYD3_k127_5755815_4	1121904.ARBP01000016_gene5201	1.29e-09	59.0	COG1131@1|root,COG1131@2|Bacteria,4NHPD@976|Bacteroidetes,47KQD@768503|Cytophagia	976|Bacteroidetes	V	ABC-2 type transporter	-	-	-	-	-	-	-	-	-	-	-	-	ABC2_membrane,ABC_tran,TerB
BYD3_k127_5758391_9	1121481.AUAS01000009_gene96	4.866e-20	90.0	COG1879@1|root,COG1879@2|Bacteria,4NIA8@976|Bacteroidetes,47MW0@768503|Cytophagia	976|Bacteroidetes	G	PFAM Periplasmic binding protein LacI transcriptional regulator	-	-	-	ko:K10439	ko02010,ko02030,map02010,map02030	M00212	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.2.1,3.A.1.2.13,3.A.1.2.19	-	-	Peripla_BP_4
BYD3_k127_5758391_6	485917.Phep_2802	6.232e-57	205.0	COG5618@1|root,COG5618@2|Bacteria,4NRFA@976|Bacteroidetes,1ISSG@117747|Sphingobacteriia	976|Bacteroidetes	S	PFAM Uncharacterised conserved protein UCP033535, periplasmic lipoprotein	-	-	-	-	-	-	-	-	-	-	-	-	DUF2291
BYD3_k127_5758391_1	485917.Phep_2803	2.695e-201	639.0	COG1129@1|root,COG1129@2|Bacteria,4PKJP@976|Bacteroidetes,1IRHI@117747|Sphingobacteriia	976|Bacteroidetes	G	PFAM ABC transporter	-	-	3.6.3.17	ko:K10441	ko02010,map02010	M00212	-	-	ko00000,ko00001,ko00002,ko01000,ko02000	3.A.1.2.1,3.A.1.2.13,3.A.1.2.19	-	-	ABC_tran
BYD3_k127_5758391_3	1121481.AUAS01000009_gene99	1.527e-155	496.0	COG1172@1|root,COG1172@2|Bacteria,4NHD9@976|Bacteroidetes,47NUU@768503|Cytophagia	976|Bacteroidetes	G	Belongs to the binding-protein-dependent transport system permease family	-	-	-	ko:K10440	ko02010,map02010	M00212	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.2.1,3.A.1.2.13,3.A.1.2.19	-	-	BPD_transp_2
BYD3_k127_5758391_0	1123277.KB893239_gene1255	5.711e-221	694.0	COG0554@1|root,COG0554@2|Bacteria,4NF9T@976|Bacteroidetes,47TP7@768503|Cytophagia	976|Bacteroidetes	C	Belongs to the FGGY kinase family	-	-	2.7.1.30	ko:K00864	ko00561,ko01100,ko03320,ko04626,map00561,map01100,map03320,map04626	-	R00847	RC00002,RC00017	ko00000,ko00001,ko01000,ko04147	-	-	-	FGGY_C,FGGY_N
BYD3_k127_5758391_2	504472.Slin_0835	6.57e-170	541.0	COG2382@1|root,COG2382@2|Bacteria,4NFVV@976|Bacteroidetes,47PFY@768503|Cytophagia	976|Bacteroidetes	P	Belongs to the glycosyl hydrolase 13 family	-	-	-	ko:K07214	-	-	-	-	ko00000	-	-	-	AMPK1_CBM,CBM_48,Esterase
BYD3_k127_5758391_7	1123057.P872_19660	2.478e-55	201.0	2C6BU@1|root,32S87@2|Bacteria,4NRX1@976|Bacteroidetes,47R4G@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_5758391_8	1288963.ADIS_2406	4.905e-37	147.0	COG4319@1|root,COG4319@2|Bacteria,4NYPP@976|Bacteroidetes	976|Bacteroidetes	S	Domain of unknown function (DUF4440)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4440
BYD3_k127_5758391_11	391587.KAOT1_19442	3.294e-08	55.0	29Q4T@1|root,30B3K@2|Bacteria,4NPGB@976|Bacteroidetes,1I3Q0@117743|Flavobacteriia	976|Bacteroidetes	S	23S rRNA-intervening sequence protein	-	-	-	-	-	-	-	-	-	-	-	-	23S_rRNA_IVP
BYD3_k127_5758391_4	153721.MYP_1717	1.618e-108	359.0	COG1131@1|root,COG1131@2|Bacteria,4NMN9@976|Bacteroidetes,47VAE@768503|Cytophagia	976|Bacteroidetes	V	ATPases associated with a variety of cellular activities	-	-	-	ko:K01990	-	M00254	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	ABC_tran
BYD3_k127_5758391_5	204669.Acid345_0285	1.355e-58	216.0	COG0842@1|root,COG0842@2|Bacteria	2|Bacteria	V	Transport permease protein	-	-	-	ko:K01992	-	M00254	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	ABC2_membrane,ABC2_membrane_3
BYD3_k127_5758391_10	1123277.KB893195_gene5685	1.653e-19	89.0	COG0577@1|root,COG0577@2|Bacteria,4NDUK@976|Bacteroidetes	976|Bacteroidetes	V	permease	-	-	-	-	-	-	-	-	-	-	-	-	FtsX,MacB_PCD
BYD3_k127_576960_0	1519464.HY22_05320	9.186e-299	927.0	COG2334@1|root,COG2334@2|Bacteria	2|Bacteria	S	homoserine kinase activity	-	-	2.7.1.39	ko:K02204	ko00260,ko01100,ko01110,ko01120,ko01230,map00260,map01100,map01110,map01120,map01230	M00018	R01771	RC00002,RC00017	ko00000,ko00001,ko00002,ko01000	-	-	-	APH,Glyco_hydro_63
BYD3_k127_576960_1	269798.CHU_3810	6.706e-218	696.0	COG3408@1|root,COG3408@2|Bacteria,4NF09@976|Bacteroidetes,47M96@768503|Cytophagia	976|Bacteroidetes	G	Glycogen debranching enzyme	-	-	-	-	-	-	-	-	-	-	-	-	GDE_C,GDE_N
BYD3_k127_5814042_0	1237149.C900_00597	0.0	1033.0	COG0823@1|root,COG0823@2|Bacteria,4NGPR@976|Bacteroidetes,47MQP@768503|Cytophagia	976|Bacteroidetes	U	Involved in the tonB-independent uptake of proteins	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_5814042_1	1237149.C900_00596	6.815e-219	691.0	COG0508@1|root,COG0508@2|Bacteria,4NFB9@976|Bacteroidetes,47KP4@768503|Cytophagia	976|Bacteroidetes	C	The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2)	pdhC	-	2.3.1.12	ko:K00627	ko00010,ko00020,ko00620,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00020,map00620,map01100,map01110,map01120,map01130,map01200	M00307	R00209,R02569	RC00004,RC02742,RC02857	br01601,ko00000,ko00001,ko00002,ko01000	-	-	-	2-oxoacid_dh,Biotin_lipoyl,E3_binding
BYD3_k127_5814042_2	313606.M23134_04189	5.223e-71	243.0	COG5405@1|root,COG5405@2|Bacteria,4NHZ8@976|Bacteroidetes,47MJS@768503|Cytophagia	976|Bacteroidetes	O	Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery	hslV	-	3.4.25.2	ko:K01419	-	-	-	-	ko00000,ko01000,ko01002	-	-	-	Proteasome
BYD3_k127_5827524_5	1237149.C900_03186	8.048e-70	242.0	COG0526@1|root,COG0526@2|Bacteria,4PKPR@976|Bacteroidetes,47PBI@768503|Cytophagia	976|Bacteroidetes	CO	Redoxin	-	-	-	-	-	-	-	-	-	-	-	-	AhpC-TSA
BYD3_k127_5827524_2	1237149.C900_04649	1.039e-307	951.0	COG1960@1|root,COG1960@2|Bacteria,4NG2G@976|Bacteroidetes,47KH2@768503|Cytophagia	976|Bacteroidetes	I	acyl-CoA dehydrogenase	-	-	-	-	-	-	-	-	-	-	-	-	Acyl-CoA_dh_1,Acyl-CoA_dh_M,Acyl-CoA_dh_N
BYD3_k127_5827524_4	1237149.C900_04650	1.155e-190	601.0	COG0183@1|root,COG0183@2|Bacteria,4NE3Q@976|Bacteroidetes,47JQD@768503|Cytophagia	976|Bacteroidetes	I	Belongs to the thiolase family	fadA	-	2.3.1.16	ko:K00632	ko00071,ko00280,ko00281,ko00362,ko00592,ko00642,ko01100,ko01110,ko01120,ko01130,ko01212,map00071,map00280,map00281,map00362,map00592,map00642,map01100,map01110,map01120,map01130,map01212	M00087,M00113	R00829,R00927,R01177,R03778,R03858,R03991,R04546,R04742,R04747,R05506,R05586,R07891,R07895,R07899,R08091,R08095	RC00004,RC00326,RC00405,RC01702,RC02728,RC02898,RC02955	ko00000,ko00001,ko00002,ko01000	-	-	-	Thiolase_C,Thiolase_N
BYD3_k127_5827524_0	1237149.C900_04651	0.0	1281.0	COG1024@1|root,COG1250@1|root,COG1024@2|Bacteria,COG1250@2|Bacteria,4NF9D@976|Bacteroidetes,47ME4@768503|Cytophagia	976|Bacteroidetes	I	3-hydroxyacyl-CoA dehydrogenase	fadN	-	1.1.1.35	ko:K07516	ko00071,ko00362,ko00650,ko01100,ko01120,ko01200,ko01212,map00071,map00362,map00650,map01100,map01120,map01200,map01212	M00087	R01975,R04737,R04739,R04741,R04743,R04745,R04748,R05305	RC00029,RC00117	ko00000,ko00001,ko00002,ko01000	-	-	-	3HCDH,3HCDH_N,ECH_1
BYD3_k127_5827524_6	1237149.C900_04652	1.219e-58	207.0	COG1846@1|root,COG1846@2|Bacteria,4NNK7@976|Bacteroidetes,47QHS@768503|Cytophagia	976|Bacteroidetes	K	Transcriptional regulator, MarR family	-	-	-	-	-	-	-	-	-	-	-	-	MarR
BYD3_k127_5827524_1	1123057.P872_12935	0.0	1087.0	COG2091@1|root,COG2091@2|Bacteria,4NFQ6@976|Bacteroidetes,47JK5@768503|Cytophagia	976|Bacteroidetes	H	lysine biosynthetic process via aminoadipic acid	-	-	-	-	-	-	-	-	-	-	-	-	CBM9_1
BYD3_k127_5827524_7	1237149.C900_04653	5.759e-40	150.0	COG1695@1|root,COG1695@2|Bacteria,4NQBA@976|Bacteroidetes	976|Bacteroidetes	K	transcriptional regulator	-	-	-	-	-	-	-	-	-	-	-	-	PadR
BYD3_k127_5827524_3	388413.ALPR1_08433	1.242e-287	906.0	COG0577@1|root,COG0577@2|Bacteria,4NDUK@976|Bacteroidetes,47JJN@768503|Cytophagia	976|Bacteroidetes	V	FtsX-like permease family	-	-	-	ko:K02004	-	M00258	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	FtsX,MacB_PCD
BYD3_k127_5841928_7	1121904.ARBP01000001_gene5338	7.851e-22	95.0	COG0480@1|root,COG0480@2|Bacteria,4NE9X@976|Bacteroidetes,47M8E@768503|Cytophagia	976|Bacteroidetes	J	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome	-	-	-	ko:K02355	-	-	-	-	ko00000,ko03012,ko03029	-	-	-	EFG_C,EFG_II,EFG_IV,GTP_EFTU,GTP_EFTU_D2
BYD3_k127_5841928_5	153721.MYP_3536	1.148e-49	188.0	2A8JR@1|root,30XN3@2|Bacteria,4PB4F@976|Bacteroidetes,47V6P@768503|Cytophagia	976|Bacteroidetes	S	Domain of unknown function (DUF4412)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4412
BYD3_k127_5841928_1	1237149.C900_00272	9.32e-251	778.0	COG0019@1|root,COG0019@2|Bacteria,4NFHV@976|Bacteroidetes,47JRV@768503|Cytophagia	976|Bacteroidetes	E	PFAM Pyridoxal-dependent decarboxylase, C-terminal sheet domain	speA	-	4.1.1.19	ko:K01585	ko00330,ko01100,map00330,map01100	M00133	R00566	RC00299	ko00000,ko00001,ko00002,ko01000	-	-	-	Orn_Arg_deC_N,Orn_DAP_Arg_deC
BYD3_k127_5841928_3	1237149.C900_00273	1.739e-132	430.0	COG0010@1|root,COG0010@2|Bacteria,4NE26@976|Bacteroidetes,47N30@768503|Cytophagia	976|Bacteroidetes	E	Belongs to the arginase family	rocF	-	3.5.3.1,3.5.3.11	ko:K01476,ko:K01480	ko00220,ko00330,ko01100,ko01110,ko01130,ko01230,ko05146,map00220,map00330,map01100,map01110,map01130,map01230,map05146	M00029,M00133,M00134	R00551,R01157	RC00024,RC00329	ko00000,ko00001,ko00002,ko01000	-	-	-	Arginase
BYD3_k127_5841928_6	1122605.KB893625_gene2027	5.189e-22	104.0	2EU2T@1|root,33MJR@2|Bacteria,4NZIZ@976|Bacteroidetes	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_5841928_2	743722.Sph21_1547	2.276e-182	574.0	COG1899@1|root,COG1899@2|Bacteria,4NEZ0@976|Bacteroidetes,1IPCP@117747|Sphingobacteriia	976|Bacteroidetes	O	Deoxyhypusine synthase	dys1	-	2.5.1.46	ko:K00809	-	-	-	-	ko00000,ko01000	-	-	-	DS
BYD3_k127_5841928_0	1237149.C900_00279	2.018e-268	837.0	COG0018@1|root,COG0018@2|Bacteria,4NE7Q@976|Bacteroidetes,47K91@768503|Cytophagia	976|Bacteroidetes	J	Arginyl-tRNA synthetase	argS	GO:0003674,GO:0003824,GO:0004812,GO:0004814,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006420,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576	6.1.1.19	ko:K01887	ko00970,map00970	M00359,M00360	R03646	RC00055,RC00523	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029	-	-	-	Arg_tRNA_synt_N,DALR_1,tRNA-synt_1d
BYD3_k127_5841928_4	1124780.ANNU01000024_gene3056	3.195e-62	218.0	COG0386@1|root,COG0386@2|Bacteria,4NM6G@976|Bacteroidetes,47P7U@768503|Cytophagia	976|Bacteroidetes	O	Belongs to the glutathione peroxidase family	gpx1	-	1.11.1.9	ko:K00432	ko00480,ko00590,ko04918,map00480,map00590,map04918	-	R00274,R07034,R07035	RC00011,RC00982	ko00000,ko00001,ko01000	-	-	-	GSHPx
BYD3_k127_5841928_8	1216967.L100_06417	2.326e-06	51.0	COG0386@1|root,COG0386@2|Bacteria,4NM6G@976|Bacteroidetes,1I1AR@117743|Flavobacteriia,34Q2Y@308865|Elizabethkingia	976|Bacteroidetes	O	Belongs to the glutathione peroxidase family	-	-	1.11.1.9	ko:K00432	ko00480,ko00590,ko04918,map00480,map00590,map04918	-	R00274,R07034,R07035	RC00011,RC00982	ko00000,ko00001,ko01000	-	-	-	GSHPx
BYD3_k127_5848745_1	1121904.ARBP01000080_gene6042	9.759e-156	506.0	COG1404@1|root,COG1404@2|Bacteria,4NF1M@976|Bacteroidetes,47MAI@768503|Cytophagia	976|Bacteroidetes	O	Peptidase S8 and S53 subtilisin kexin sedolisin	wprA	-	-	-	-	-	-	-	-	-	-	-	Peptidase_S8
BYD3_k127_5848745_7	1237149.C900_01373	2.097e-12	72.0	COG0071@1|root,COG0071@2|Bacteria,4NXRP@976|Bacteroidetes,47SZP@768503|Cytophagia	976|Bacteroidetes	O	Belongs to the small heat shock protein (HSP20) family	-	-	-	-	-	-	-	-	-	-	-	-	HSP20
BYD3_k127_5848745_6	869213.JCM21142_93619	1.796e-34	139.0	2AFQQ@1|root,315SK@2|Bacteria,4NJD4@976|Bacteroidetes,47PFM@768503|Cytophagia	976|Bacteroidetes	S	NUMOD4 motif	-	-	-	-	-	-	-	-	-	-	-	-	HNH_3,NUMOD4
BYD3_k127_5848745_2	1279009.ADICEAN_01598	2.318e-135	436.0	COG0115@1|root,COG0115@2|Bacteria,4NI83@976|Bacteroidetes,47URP@768503|Cytophagia	976|Bacteroidetes	EH	Amino-transferase class IV	-	-	2.6.1.42	ko:K00826	ko00270,ko00280,ko00290,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00270,map00280,map00290,map00770,map01100,map01110,map01130,map01210,map01230	M00019,M00036,M00119,M00570	R01090,R01214,R02199,R10991	RC00006,RC00036	ko00000,ko00001,ko00002,ko01000,ko01007	-	-	-	Aminotran_4
BYD3_k127_5848745_3	1313421.JHBV01000016_gene5721	1.135e-73	254.0	2C3PP@1|root,2Z954@2|Bacteria,4NIZX@976|Bacteroidetes	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_5848745_5	983544.Lacal_1163	1.554e-35	139.0	COG4068@1|root,COG4068@2|Bacteria,4NQ3Z@976|Bacteroidetes,1I2T2@117743|Flavobacteriia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	DUF2116
BYD3_k127_5848745_4	1237149.C900_05594	1.955e-47	172.0	COG0629@1|root,COG0629@2|Bacteria,4NQBK@976|Bacteroidetes,47RWZ@768503|Cytophagia	976|Bacteroidetes	L	Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism	ssb	-	-	ko:K03111	ko03030,ko03430,ko03440,map03030,map03430,map03440	-	-	-	ko00000,ko00001,ko03029,ko03032,ko03400	-	-	-	SSB
BYD3_k127_5848745_0	1237149.C900_05597	8.104e-187	604.0	COG1361@1|root,COG1361@2|Bacteria,4PKPA@976|Bacteroidetes	976|Bacteroidetes	M	Aerotolerance regulator N-terminal	-	-	-	-	-	-	-	-	-	-	-	-	BatA,CARDB
BYD3_k127_5848745_8	153721.MYP_3389	0.0001211	45.0	COG0044@1|root,COG0044@2|Bacteria,4NDUZ@976|Bacteroidetes,47KKP@768503|Cytophagia	976|Bacteroidetes	F	TIGRFAM dihydroorotase, multifunctional complex type	pyrC	-	3.5.2.3	ko:K01465	ko00240,ko01100,map00240,map01100	M00051	R01993	RC00632	ko00000,ko00001,ko00002,ko01000	-	-	-	Amidohydro_1
BYD3_k127_5857492_7	1185876.BN8_05996	1.527e-110	366.0	COG1129@1|root,COG1129@2|Bacteria,4PKJP@976|Bacteroidetes,47JPJ@768503|Cytophagia	976|Bacteroidetes	G	ABC transporter	-	-	3.6.3.17	ko:K10441	ko02010,map02010	M00212	-	-	ko00000,ko00001,ko00002,ko01000,ko02000	3.A.1.2.1,3.A.1.2.13,3.A.1.2.19	-	-	ABC_tran
BYD3_k127_5857492_5	1185876.BN8_06002	1.679e-130	423.0	COG1172@1|root,COG1172@2|Bacteria,4NHD9@976|Bacteroidetes,47KFH@768503|Cytophagia	976|Bacteroidetes	G	Branched-chain amino acid transport system / permease component	-	-	-	ko:K10439,ko:K10440	ko02010,ko02030,map02010,map02030	M00212	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.2.1,3.A.1.2.13,3.A.1.2.19	-	-	BPD_transp_2
BYD3_k127_5857492_2	1185876.BN8_06003	9.588e-173	553.0	COG1879@1|root,COG1879@2|Bacteria,4NKXR@976|Bacteroidetes,47U11@768503|Cytophagia	976|Bacteroidetes	G	Periplasmic binding protein domain	-	-	-	ko:K10439	ko02010,ko02030,map02010,map02030	M00212	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.2.1,3.A.1.2.13,3.A.1.2.19	-	-	Peripla_BP_4
BYD3_k127_5857492_1	1237149.C900_02538	6.097e-226	715.0	COG0508@1|root,COG0508@2|Bacteria,4PKNP@976|Bacteroidetes,47MW8@768503|Cytophagia	976|Bacteroidetes	C	Domain of Unknown Function (DUF349)	-	-	-	-	-	-	-	-	-	-	-	-	DUF349
BYD3_k127_5857492_9	1237149.C900_02539	1.352e-78	266.0	COG1678@1|root,COG1678@2|Bacteria,4NFQA@976|Bacteroidetes,47M9N@768503|Cytophagia	976|Bacteroidetes	K	Belongs to the UPF0301 (AlgH) family	-	-	-	ko:K07735	-	-	-	-	ko00000,ko03000	-	-	-	DUF179
BYD3_k127_5857492_10	1237149.C900_02541	9.827e-77	263.0	COG0259@1|root,COG0259@2|Bacteria,4NFH7@976|Bacteroidetes,47P7A@768503|Cytophagia	976|Bacteroidetes	H	Catalyzes the oxidation of either pyridoxine 5'- phosphate (PNP) or pyridoxamine 5'-phosphate (PMP) into pyridoxal 5'-phosphate (PLP)	pdxH	-	1.4.3.5	ko:K00275	ko00750,ko01100,ko01120,map00750,map01100,map01120	M00124	R00277,R00278,R01710,R01711	RC00048,RC00116	ko00000,ko00001,ko00002,ko01000	-	-	-	PNP_phzG_C,Putative_PNPOx
BYD3_k127_5857492_8	1237149.C900_00056	1.804e-96	321.0	COG2120@1|root,COG2120@2|Bacteria,4NEDJ@976|Bacteroidetes,47K51@768503|Cytophagia	976|Bacteroidetes	S	PFAM GlcNAc-PI de-N-acetylase	bshB1	-	-	ko:K01463	-	-	-	-	ko00000,ko01000	-	-	-	PIG-L
BYD3_k127_5857492_4	1237149.C900_04237	3.3e-161	513.0	COG0492@1|root,COG0492@2|Bacteria,4NEVX@976|Bacteroidetes,47JQX@768503|Cytophagia	976|Bacteroidetes	C	Thioredoxin reductase	trxB	-	1.8.1.9	ko:K00384	ko00450,map00450	-	R02016,R03596,R09372	RC00013,RC02518,RC02873	ko00000,ko00001,ko01000	-	-	-	Pyr_redox_2
BYD3_k127_5857492_3	1237149.C900_04236	1.43e-169	534.0	COG0568@1|root,COG0568@2|Bacteria,4NEBF@976|Bacteroidetes,47JZ7@768503|Cytophagia	976|Bacteroidetes	K	Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released	rpoD	-	-	ko:K03086	-	-	-	-	ko00000,ko03021	-	-	-	Sigma70_r1_2,Sigma70_r2,Sigma70_r3,Sigma70_r4
BYD3_k127_5857492_0	1237149.C900_04235	0.0	1046.0	COG1185@1|root,COG1185@2|Bacteria,4NE4Q@976|Bacteroidetes,47KTE@768503|Cytophagia	976|Bacteroidetes	J	Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction	pnp	-	2.7.7.8	ko:K00962	ko00230,ko00240,ko03018,map00230,map00240,map03018	M00394	R00437,R00438,R00439,R00440	RC02795	ko00000,ko00001,ko00002,ko01000,ko03016,ko03019	-	-	-	KH_1,PNPase,RNase_PH,RNase_PH_C,S1
BYD3_k127_5857492_11	1237149.C900_04234	2.158e-34	135.0	COG0184@1|root,COG0184@2|Bacteria,4NS7U@976|Bacteroidetes,47R7H@768503|Cytophagia	976|Bacteroidetes	J	Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome	rpsO	GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015935,GO:0022626,GO:0022627,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904	-	ko:K02956	ko03010,map03010	M00178,M00179	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_S15
BYD3_k127_5857492_6	1237149.C900_04233	7.216e-117	391.0	COG0795@1|root,COG0795@2|Bacteria,4NE8B@976|Bacteroidetes,47JCU@768503|Cytophagia	976|Bacteroidetes	S	Permease YjgP YjgQ family	-	-	-	ko:K07091	ko02010,map02010	M00320	-	-	ko00000,ko00001,ko00002,ko02000	1.B.42.1	-	-	YjgP_YjgQ
BYD3_k127_5865995_4	1150600.ADIARSV_2965	1.436e-77	261.0	COG0399@1|root,COG0399@2|Bacteria,4NGI4@976|Bacteroidetes,1IPNX@117747|Sphingobacteriia	976|Bacteroidetes	E	Belongs to the DegT DnrJ EryC1 family	vioA	-	2.6.1.33	ko:K20429	-	-	R02773	RC00006,RC00781	ko00000,ko01000	-	-	-	DegT_DnrJ_EryC1
BYD3_k127_5865995_7	880073.Calab_2798	1.872e-09	70.0	COG2244@1|root,COG2244@2|Bacteria	2|Bacteria	S	polysaccharide biosynthetic process	-	-	-	-	-	-	-	-	-	-	-	-	Polysacc_synt,Polysacc_synt_3,Polysacc_synt_C
BYD3_k127_5865995_0	1305737.JAFX01000001_gene3626	8.356e-118	392.0	COG0438@1|root,COG0438@2|Bacteria,4NE6S@976|Bacteroidetes,47P7K@768503|Cytophagia	976|Bacteroidetes	M	Glycosyl transferases group 1	-	-	-	-	-	-	-	-	-	-	-	-	Glyco_trans_1_4,Glyco_transf_4
BYD3_k127_5865995_2	1048983.EL17_16620	3.854e-104	346.0	COG0324@1|root,COG0324@2|Bacteria,4NEAE@976|Bacteroidetes,47KKI@768503|Cytophagia	976|Bacteroidetes	J	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)	miaA	GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016765,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0052381,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360	2.5.1.75	ko:K00791	ko00908,ko01100,ko01110,map00908,map01100,map01110	-	R01122	RC02820	ko00000,ko00001,ko01000,ko01006,ko03016	-	-	-	IPPT
BYD3_k127_5865995_5	643867.Ftrac_0832	3.299e-30	121.0	2E4YQ@1|root,32ZSH@2|Bacteria,4NVKX@976|Bacteroidetes,47RX3@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_5865995_3	153721.MYP_482	7.385e-104	342.0	COG1235@1|root,COG1235@2|Bacteria,4NDWB@976|Bacteroidetes,47JF0@768503|Cytophagia	976|Bacteroidetes	S	of the beta-lactamase superfamily I	phnP	-	3.1.4.55	ko:K06167	ko00440,map00440	-	R10205	RC00296	ko00000,ko00001,ko01000	-	-	-	Lactamase_B_2
BYD3_k127_5865995_1	1237149.C900_01616	7.158e-109	368.0	COG1293@1|root,COG1293@2|Bacteria,4NGP5@976|Bacteroidetes,47M54@768503|Cytophagia	976|Bacteroidetes	K	Fibronectin-binding protein A N-terminus (FbpA)	-	-	-	-	-	-	-	-	-	-	-	-	DUF814,FbpA
BYD3_k127_5865995_6	1237149.C900_01616	8.315e-17	80.0	COG1293@1|root,COG1293@2|Bacteria,4NGP5@976|Bacteroidetes,47M54@768503|Cytophagia	976|Bacteroidetes	K	Fibronectin-binding protein A N-terminus (FbpA)	-	-	-	-	-	-	-	-	-	-	-	-	DUF814,FbpA
BYD3_k127_587497_5	1237149.C900_02207	5.46e-39	150.0	COG1051@1|root,COG1051@2|Bacteria,4NS9I@976|Bacteroidetes,47NQ9@768503|Cytophagia	976|Bacteroidetes	F	NUDIX domain	-	-	-	-	-	-	-	-	-	-	-	-	NUDIX
BYD3_k127_587497_2	1189612.A33Q_4015	3.666e-81	275.0	COG0461@1|root,COG0461@2|Bacteria,4NEF8@976|Bacteroidetes,47JX7@768503|Cytophagia	976|Bacteroidetes	F	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)	pyrE	-	2.4.2.10,4.1.1.23	ko:K00762,ko:K13421	ko00240,ko00983,ko01100,map00240,map00983,map01100	M00051	R00965,R01870,R08231	RC00063,RC00409,RC00611	ko00000,ko00001,ko00002,ko01000	-	-	-	OMPdecase,Pribosyltran
BYD3_k127_587497_6	761193.Runsl_0848	1.125e-19	91.0	COG0665@1|root,COG0665@2|Bacteria,4NKQK@976|Bacteroidetes,47Q2W@768503|Cytophagia	976|Bacteroidetes	E	FAD dependent oxidoreductase	-	-	-	-	-	-	-	-	-	-	-	-	DAO
BYD3_k127_587497_1	761193.Runsl_0848	1.067e-129	423.0	COG0665@1|root,COG0665@2|Bacteria,4NKQK@976|Bacteroidetes,47Q2W@768503|Cytophagia	976|Bacteroidetes	E	FAD dependent oxidoreductase	-	-	-	-	-	-	-	-	-	-	-	-	DAO
BYD3_k127_587497_0	485918.Cpin_4672	1.848e-187	595.0	COG0673@1|root,COG0673@2|Bacteria,4NGGS@976|Bacteroidetes,1IQPN@117747|Sphingobacteriia	976|Bacteroidetes	S	Oxidoreductase	-	-	-	-	-	-	-	-	-	-	-	-	GFO_IDH_MocA,GFO_IDH_MocA_C
BYD3_k127_587497_3	313606.M23134_04898	1.611e-63	223.0	COG1648@1|root,COG1648@2|Bacteria,4NI81@976|Bacteroidetes,47PPT@768503|Cytophagia	976|Bacteroidetes	H	Siroheme synthase	cysG	-	1.3.1.76,4.99.1.4	ko:K02304,ko:K07090	ko00860,ko01100,ko01110,ko01120,map00860,map01100,map01110,map01120	M00121	R02864,R03947	RC01012,RC01034	ko00000,ko00001,ko00002,ko01000	-	-	-	NAD_binding_7,Sirohm_synth_M,TauE
BYD3_k127_587497_4	504472.Slin_2052	2.495e-42	158.0	COG0007@1|root,COG0007@2|Bacteria,4NFVR@976|Bacteroidetes,47JQG@768503|Cytophagia	976|Bacteroidetes	H	TIGRFAM Uroporphyrin-III C-methyltransferase	-	-	2.1.1.107,4.2.1.75	ko:K02303,ko:K13542	ko00860,ko01100,ko01110,ko01120,map00860,map01100,map01110,map01120	M00121	R03165,R03194	RC00003,RC00871,RC01861	ko00000,ko00001,ko00002,ko01000	-	-	-	HEM4,TP_methylase
BYD3_k127_5910997_0	1408473.JHXO01000007_gene826	1.494e-140	461.0	COG0457@1|root,COG2207@1|root,COG5616@1|root,COG0457@2|Bacteria,COG2207@2|Bacteria,COG5616@2|Bacteria,4NFW7@976|Bacteroidetes	976|Bacteroidetes	K	COGs COG5616 integral membrane protein	-	-	-	-	-	-	-	-	-	-	-	-	HTH_18,TPR_8
BYD3_k127_5910997_2	880071.Fleli_1852	6.614e-53	190.0	COG1595@1|root,COG1595@2|Bacteria,4NETF@976|Bacteroidetes,47QDK@768503|Cytophagia	976|Bacteroidetes	K	Belongs to the sigma-70 factor family. ECF subfamily	-	-	-	ko:K03088	-	-	-	-	ko00000,ko03021	-	-	-	Sigma70_r2,Sigma70_r4_2
BYD3_k127_5910997_1	1288963.ADIS_2849	9.167e-93	319.0	COG2133@1|root,COG2133@2|Bacteria,4PMM3@976|Bacteroidetes,47NGM@768503|Cytophagia	976|Bacteroidetes	G	Methane oxygenase PmoA	-	-	-	-	-	-	-	-	-	-	-	-	PmoA
BYD3_k127_5910997_3	1121904.ARBP01000037_gene2058	2.725e-17	81.0	COG3257@1|root,COG3257@2|Bacteria,4NKCS@976|Bacteroidetes,47M25@768503|Cytophagia	976|Bacteroidetes	L	Cupin domain	-	-	3.5.3.26	ko:K14977	ko00230,ko01120,map00230,map01120	-	R05554	RC01419	ko00000,ko00001,ko01000	-	-	-	AraC_binding,Cupin_2
BYD3_k127_5929750_4	1121859.KB890738_gene3410	1.225e-09	62.0	COG1104@1|root,COG1104@2|Bacteria,4NFF6@976|Bacteroidetes,47MAZ@768503|Cytophagia	976|Bacteroidetes	E	PFAM aminotransferase class V	iscS	-	2.8.1.7	ko:K04487	ko00730,ko01100,ko04122,map00730,map01100,map04122	-	R07460,R11528,R11529	RC01789,RC02313	ko00000,ko00001,ko01000,ko02048,ko03016,ko03029	-	-	-	Aminotran_5
BYD3_k127_5929750_1	926549.KI421517_gene2913	1.941e-84	293.0	COG0079@1|root,COG0079@2|Bacteria,4NEW8@976|Bacteroidetes,47M27@768503|Cytophagia	976|Bacteroidetes	E	PFAM Aminotransferase class I and II	-	-	2.6.1.9	ko:K00817	ko00340,ko00350,ko00360,ko00400,ko00401,ko00960,ko01100,ko01110,ko01130,ko01230,map00340,map00350,map00360,map00400,map00401,map00960,map01100,map01110,map01130,map01230	M00026	R00694,R00734,R03243	RC00006,RC00888	ko00000,ko00001,ko00002,ko01000,ko01007	-	-	-	Aminotran_1_2
BYD3_k127_5929750_0	743722.Sph21_4406	7.789e-129	432.0	COG0249@1|root,COG0249@2|Bacteria,4NE6X@976|Bacteroidetes,1IQ4B@117747|Sphingobacteriia	976|Bacteroidetes	L	SMART DNA mismatch repair protein MutS	mutS_2	-	-	-	-	-	-	-	-	-	-	-	MutS_III,MutS_V
BYD3_k127_5929750_2	1124780.ANNU01000005_gene2447	1.554e-71	245.0	COG1956@1|root,COG1956@2|Bacteria,4NM6D@976|Bacteroidetes,47PCM@768503|Cytophagia	976|Bacteroidetes	T	GAF domain-containing protein	msrC	-	1.8.4.14	ko:K08968	ko00270,map00270	-	R02025	RC00639	ko00000,ko00001,ko01000	-	-	-	GAF,GAF_2
BYD3_k127_5929750_3	1124780.ANNU01000075_gene818	6.14e-40	149.0	COG0662@1|root,COG0662@2|Bacteria,4NS6V@976|Bacteroidetes,47QTI@768503|Cytophagia	976|Bacteroidetes	G	mannose-6-phosphate isomerase	-	-	-	-	-	-	-	-	-	-	-	-	Cupin_2
BYD3_k127_5935823_11	504472.Slin_6188	6.987e-11	71.0	COG0810@1|root,COG1629@1|root,COG4219@1|root,COG0810@2|Bacteria,COG1629@2|Bacteria,COG4219@2|Bacteria,4NDWS@976|Bacteroidetes,47M7Q@768503|Cytophagia	976|Bacteroidetes	KMT	PFAM BlaR1 peptidase M56	-	-	-	-	-	-	-	-	-	-	-	-	CarbopepD_reg_2,Peptidase_M56,Plug,TonB_C
BYD3_k127_5935823_0	1121875.KB907547_gene3465	1.755e-271	852.0	COG2010@1|root,COG4993@1|root,COG2010@2|Bacteria,COG4993@2|Bacteria,4NFK0@976|Bacteroidetes	976|Bacteroidetes	G	Pyrrolo-quinoline quinone	-	-	-	-	-	-	-	-	-	-	-	-	PQQ
BYD3_k127_5935823_7	1459636.NTE_03410	3.032e-25	113.0	COG3945@1|root,arCOG01471@2157|Archaea	2157|Archaea	S	Hemerythrin HHE cation binding	-	-	-	ko:K07322	-	-	-	-	ko00000	-	-	-	Hemerythrin,PRC,ScdA_N
BYD3_k127_5935823_2	1123037.AUDE01000005_gene3082	2.002e-135	472.0	COG4191@1|root,COG4191@2|Bacteria,4NEJX@976|Bacteroidetes,1HXCA@117743|Flavobacteriia	976|Bacteroidetes	T	COG0642 Signal transduction histidine kinase	-	-	-	-	-	-	-	-	-	-	-	-	HATPase_c,HisKA,Reg_prop,Y_Y_Y
BYD3_k127_5935823_1	1123277.KB893203_gene6259	2.557e-184	586.0	COG0624@1|root,COG0624@2|Bacteria,4NJEK@976|Bacteroidetes,47N41@768503|Cytophagia	976|Bacteroidetes	E	Peptidase family M20/M25/M40	-	-	3.5.1.6,3.5.1.87	ko:K06016	ko00240,ko01100,map00240,map01100	M00046	R00905,R04666	RC00096	ko00000,ko00001,ko00002,ko01000	-	-	-	M20_dimer,Peptidase_M20,Peptidase_M28
BYD3_k127_5935823_3	620914.JH621248_gene3079	6.89e-95	324.0	COG3468@1|root,COG3468@2|Bacteria,4NEVR@976|Bacteroidetes,1HXUP@117743|Flavobacteriia,2YIGE@290174|Aquimarina	976|Bacteroidetes	MU	outer membrane autotransporter barrel domain protein	-	-	-	-	-	-	-	-	-	-	-	-	OMP_b-brl_2
BYD3_k127_5935823_9	1124780.ANNU01000028_gene1007	1.602e-16	88.0	COG0810@1|root,COG0810@2|Bacteria,4NMG7@976|Bacteroidetes,47KAX@768503|Cytophagia	976|Bacteroidetes	U	Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins	-	-	-	ko:K03832	-	-	-	-	ko00000,ko02000	2.C.1.1	-	-	TonB_C
BYD3_k127_5935823_10	1121898.Q766_02580	2.66e-14	73.0	2E3V1@1|root,32YSA@2|Bacteria,4NV88@976|Bacteroidetes,1I5CK@117743|Flavobacteriia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_5935823_4	376686.Fjoh_2530	8.819e-83	278.0	COG1335@1|root,COG1335@2|Bacteria,4NP7C@976|Bacteroidetes,1I299@117743|Flavobacteriia,2NVQ0@237|Flavobacterium	976|Bacteroidetes	Q	Isochorismatase family	-	-	-	-	-	-	-	-	-	-	-	-	Isochorismatase
BYD3_k127_5935823_8	391587.KAOT1_19397	6.582e-23	110.0	COG0726@1|root,COG0726@2|Bacteria,4NN39@976|Bacteroidetes,1I52I@117743|Flavobacteriia	976|Bacteroidetes	G	Polysaccharide deacetylase	-	-	-	-	-	-	-	-	-	-	-	-	Polysacc_deac_1
BYD3_k127_5935823_6	1408445.JHXP01000006_gene126	8.881e-31	133.0	COG1247@1|root,COG1247@2|Bacteria,1PZ4K@1224|Proteobacteria,1T7VF@1236|Gammaproteobacteria,1JFWU@118969|Legionellales	118969|Legionellales	M	Acetyltransferase (GNAT) domain	-	-	-	-	-	-	-	-	-	-	-	-	Acetyltransf_9
BYD3_k127_5935823_5	929562.Emtol_3167	3.774e-51	182.0	COG0627@1|root,COG0627@2|Bacteria,4NE7D@976|Bacteroidetes,47KC0@768503|Cytophagia	976|Bacteroidetes	S	esterase	-	-	-	-	-	-	-	-	-	-	-	-	Esterase
BYD3_k127_5939919_1	1121904.ARBP01000015_gene245	2.629e-52	198.0	COG2203@1|root,COG2203@2|Bacteria	2|Bacteria	T	Gaf domain	-	-	-	-	-	-	-	-	-	-	-	-	4HB_MCP_1,GAF_2,HATPase_c,HisKA,PAS_3,PAS_9,Response_reg
BYD3_k127_5939919_0	269798.CHU_1766	2.849e-103	347.0	COG4335@1|root,COG4335@2|Bacteria,4NH5H@976|Bacteroidetes,47MI7@768503|Cytophagia	976|Bacteroidetes	L	DNA alkylation repair	-	-	-	-	-	-	-	-	-	-	-	-	DNA_alkylation,HEAT
BYD3_k127_5939919_2	1237149.C900_04644	2.888e-52	199.0	2BYCP@1|root,2ZAHR@2|Bacteria,4NJ23@976|Bacteroidetes,47NMK@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_5939919_3	926549.KI421517_gene1919	4.911e-22	102.0	COG2146@1|root,COG2146@2|Bacteria,4NVFP@976|Bacteroidetes,47S4K@768503|Cytophagia	976|Bacteroidetes	P	Rieske [2Fe-2S] domain	-	-	-	ko:K05710	ko00360,ko01120,ko01220,map00360,map01120,map01220	M00545	R06782,R06783	RC00098	br01602,ko00000,ko00001,ko00002	-	-	-	Rieske
BYD3_k127_5939919_4	1089547.KB913013_gene3846	2.298e-20	94.0	COG1473@1|root,COG1473@2|Bacteria,4NGBI@976|Bacteroidetes,47JXE@768503|Cytophagia	976|Bacteroidetes	S	PFAM Peptidase family M20 M25 M40	-	-	-	ko:K01436	-	-	-	-	ko00000,ko01000,ko01002	-	-	-	M20_dimer,Peptidase_M20
BYD3_k127_594601_2	700598.Niako_4883	1.479e-54	207.0	2C34F@1|root,2Z9Q8@2|Bacteria,4NGJP@976|Bacteroidetes,1IYWI@117747|Sphingobacteriia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_594601_0	468059.AUHA01000002_gene685	2.368e-197	623.0	COG1473@1|root,COG1473@2|Bacteria,4NGBI@976|Bacteroidetes,1IPDN@117747|Sphingobacteriia	976|Bacteroidetes	S	PFAM Peptidase family M20 M25 M40	-	-	-	ko:K01436	-	-	-	-	ko00000,ko01000,ko01002	-	-	-	M20_dimer,Peptidase_M20
BYD3_k127_594601_1	1121904.ARBP01000004_gene1059	2.875e-157	525.0	COG0577@1|root,COG0577@2|Bacteria,4NDUK@976|Bacteroidetes,47NTJ@768503|Cytophagia	976|Bacteroidetes	V	MacB-like periplasmic core domain	-	-	-	ko:K02004	-	M00258	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	FtsX,MacB_PCD
BYD3_k127_5950063_12	1121288.AULL01000012_gene320	2.054e-16	81.0	COG0607@1|root,COG0607@2|Bacteria,4NSD1@976|Bacteroidetes,1I4FW@117743|Flavobacteriia,3ZS7R@59732|Chryseobacterium	976|Bacteroidetes	P	Rhodanese Homology Domain	-	-	-	-	-	-	-	-	-	-	-	-	Rhodanese
BYD3_k127_5950063_7	1237149.C900_02138	1.809e-51	187.0	COG0716@1|root,COG0716@2|Bacteria,4NVV8@976|Bacteroidetes	976|Bacteroidetes	C	FMN binding	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_5950063_9	1440774.Y900_001380	3.189e-34	139.0	COG3832@1|root,COG3832@2|Bacteria,2GY9A@201174|Actinobacteria,233HR@1762|Mycobacteriaceae	201174|Actinobacteria	E	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_5950063_1	1123057.P872_21825	4.419e-132	424.0	COG0767@1|root,COG0767@2|Bacteria,4NF7X@976|Bacteroidetes,47K33@768503|Cytophagia	976|Bacteroidetes	Q	ABC-type transport system involved in resistance to organic solvents permease component	-	-	-	ko:K02066	ko02010,map02010	M00210,M00669,M00670	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.27	-	-	MlaE
BYD3_k127_5950063_2	1123057.P872_21820	1.047e-114	373.0	COG1127@1|root,COG1127@2|Bacteria,4NETJ@976|Bacteroidetes,47NIJ@768503|Cytophagia	976|Bacteroidetes	Q	ABC transporter	-	-	-	ko:K02065	ko02010,map02010	M00210,M00669,M00670	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.27	-	-	ABC_tran
BYD3_k127_5950063_4	1123057.P872_21815	1.718e-95	323.0	COG1463@1|root,COG1463@2|Bacteria,4NGHE@976|Bacteroidetes,47T9B@768503|Cytophagia	976|Bacteroidetes	Q	MlaD protein	-	-	-	ko:K02067	ko02010,map02010	M00210,M00669,M00670	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.27	-	-	MlaD
BYD3_k127_5950063_6	1237149.C900_03829	4.608e-53	197.0	COG0589@1|root,COG0589@2|Bacteria	2|Bacteria	T	AMP binding	uspA	-	-	-	-	-	-	-	-	-	-	-	DUF2007,Usp
BYD3_k127_5950063_8	1237149.C900_03826	6.443e-45	167.0	COG3467@1|root,COG3467@2|Bacteria,4NQFR@976|Bacteroidetes,47QC8@768503|Cytophagia	976|Bacteroidetes	S	Pyridoxamine 5'-phosphate oxidase	-	-	-	ko:K07005	-	-	-	-	ko00000	-	-	-	Pyridox_ox_2
BYD3_k127_5950063_0	926549.KI421517_gene2766	5.564e-196	618.0	COG0427@1|root,COG0427@2|Bacteria,4NFS3@976|Bacteroidetes,47M24@768503|Cytophagia	976|Bacteroidetes	C	PFAM Acetyl-CoA hydrolase transferase	-	-	-	-	-	-	-	-	-	-	-	-	AcetylCoA_hyd_C,AcetylCoA_hydro
BYD3_k127_5950063_11	1237149.C900_03825	3.73e-24	108.0	COG3685@1|root,COG3685@2|Bacteria	2|Bacteria	S	cellular response to DNA damage stimulus	yciF	GO:0006950,GO:0006974,GO:0008150,GO:0009987,GO:0033554,GO:0050896,GO:0051716	-	-	-	-	-	-	-	-	-	-	DUF892
BYD3_k127_5950063_5	760192.Halhy_0628	6.038e-93	312.0	COG1611@1|root,COG1611@2|Bacteria,4NF20@976|Bacteroidetes,1IQFQ@117747|Sphingobacteriia	976|Bacteroidetes	S	Belongs to the LOG family	-	-	3.2.2.10	ko:K06966	ko00230,ko00240,map00230,map00240	-	R00182,R00510	RC00063,RC00318	ko00000,ko00001,ko01000	-	-	-	Lysine_decarbox
BYD3_k127_5950063_3	1123248.KB893317_gene4339	3.403e-96	328.0	COG1793@1|root,COG3285@1|root,COG1793@2|Bacteria,COG3285@2|Bacteria,4NESR@976|Bacteroidetes,1IQI9@117747|Sphingobacteriia	976|Bacteroidetes	L	DNA ligase	-	-	6.5.1.1	ko:K01971	ko03450,map03450	-	R00381	RC00005	ko00000,ko00001,ko01000,ko03400	-	-	-	DNA_ligase_A_C,DNA_ligase_A_M,LigD_N
BYD3_k127_5967186_3	1237149.C900_00713	9.612e-99	323.0	COG4867@1|root,COG4867@2|Bacteria,4NFMA@976|Bacteroidetes,47K13@768503|Cytophagia	976|Bacteroidetes	S	von Willebrand factor, type A	-	-	-	-	-	-	-	-	-	-	-	-	VWA_2
BYD3_k127_5967186_0	1237149.C900_00714	1.839e-241	754.0	COG1239@1|root,COG1239@2|Bacteria,4NF1J@976|Bacteroidetes,47JD2@768503|Cytophagia	976|Bacteroidetes	H	magnesium chelatase	chlI	-	6.6.1.1	ko:K03405	ko00860,ko01100,ko01110,map00860,map01100,map01110	-	R03877	RC01012	ko00000,ko00001,ko01000	-	-	-	AAA_5,Sigma54_activat
BYD3_k127_5967186_5	1237149.C900_00715	1.174e-56	205.0	COG2865@1|root,COG2865@2|Bacteria,4NGPG@976|Bacteroidetes,47N5X@768503|Cytophagia	976|Bacteroidetes	K	transcriptional regulator	-	-	-	-	-	-	-	-	-	-	-	-	AlbA_2
BYD3_k127_5967186_1	1237149.C900_00716	4.076e-239	745.0	COG1875@1|root,COG1875@2|Bacteria,4NDUI@976|Bacteroidetes,47M94@768503|Cytophagia	976|Bacteroidetes	T	PIN domain	ybeZ_1	-	-	ko:K07175	-	-	-	-	ko00000	-	-	-	PIN_4,PhoH
BYD3_k127_5967186_2	1237149.C900_02882	1.985e-139	446.0	COG0413@1|root,COG0413@2|Bacteria,4NDX4@976|Bacteroidetes,47K8P@768503|Cytophagia	976|Bacteroidetes	H	Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha-ketoisovalerate to form ketopantoate	panB	-	2.1.2.11	ko:K00606	ko00770,ko01100,ko01110,map00770,map01100,map01110	M00119	R01226	RC00022,RC00200	ko00000,ko00001,ko00002,ko01000	-	-	-	Pantoate_transf
BYD3_k127_5967186_4	1237149.C900_02880	1.075e-60	213.0	COG2065@1|root,COG2065@2|Bacteria,4NNRI@976|Bacteroidetes,47QMM@768503|Cytophagia	976|Bacteroidetes	F	Pyrimidine operon attenuation protein uracil phosphoribosyltransferase	pyrR	-	2.4.2.9	ko:K02825	ko00240,ko01100,map00240,map01100	-	R00966	RC00063	ko00000,ko00001,ko01000,ko03000	-	-	-	Pribosyltran
BYD3_k127_5976080_4	761193.Runsl_5470	6.242e-99	327.0	COG0405@1|root,COG0405@2|Bacteria,4NG3X@976|Bacteroidetes,47MKS@768503|Cytophagia	976|Bacteroidetes	E	Gamma-glutamyltranspeptidase	-	-	2.3.2.2,3.4.19.13	ko:K00681	ko00430,ko00460,ko00480,ko01100,map00430,map00460,map00480,map01100	-	R00494,R01262,R01687,R03867,R03916,R03970,R03971,R04935	RC00064,RC00090,RC00096	ko00000,ko00001,ko01000,ko01002	-	-	-	G_glu_transpept
BYD3_k127_5976080_8	761193.Runsl_2704	7.3e-42	162.0	COG1741@1|root,COG1741@2|Bacteria,4NGJ5@976|Bacteroidetes,47Q2V@768503|Cytophagia	976|Bacteroidetes	S	Belongs to the pirin family	-	-	-	ko:K06911	-	-	-	-	ko00000	-	-	-	Pirin
BYD3_k127_5976080_5	761193.Runsl_2706	1.418e-87	294.0	COG3485@1|root,COG3485@2|Bacteria,4NFYS@976|Bacteroidetes,47KW0@768503|Cytophagia	976|Bacteroidetes	Q	Dioxygenase	-	-	-	-	-	-	-	-	-	-	-	-	Dioxygenase_C
BYD3_k127_5976080_0	1185876.BN8_02269	1.051e-185	591.0	COG1228@1|root,COG1228@2|Bacteria,4NEV0@976|Bacteroidetes,47MH5@768503|Cytophagia	976|Bacteroidetes	Q	Amidohydrolase family	-	-	-	-	-	-	-	-	-	-	-	-	Amidohydro_1
BYD3_k127_5976080_7	1124780.ANNU01000036_gene50	1.519e-44	166.0	COG0824@1|root,COG0824@2|Bacteria,4NSIG@976|Bacteroidetes,47S22@768503|Cytophagia	976|Bacteroidetes	S	Acyl-ACP thioesterase	-	-	-	ko:K07107	-	-	-	-	ko00000,ko01000	-	-	-	Acyl-ACP_TE
BYD3_k127_5976080_6	1123248.KB893337_gene2358	3.016e-46	170.0	COG3437@1|root,COG3437@2|Bacteria,4PN7C@976|Bacteroidetes	976|Bacteroidetes	T	cheY-homologous receiver domain	-	-	-	-	-	-	-	-	-	-	-	-	Response_reg
BYD3_k127_5976080_3	485918.Cpin_2165	2.325e-132	439.0	COG4251@1|root,COG5278@1|root,COG4251@2|Bacteria,COG5278@2|Bacteria,4NIJY@976|Bacteroidetes	976|Bacteroidetes	T	His Kinase A (phosphoacceptor) domain	-	-	-	-	-	-	-	-	-	-	-	-	CHASE3,HAMP,HATPase_c,HisKA
BYD3_k127_5976080_2	700598.Niako_4439	2.559e-140	456.0	COG3503@1|root,COG3503@2|Bacteria,4NFAF@976|Bacteroidetes,1IYZU@117747|Sphingobacteriia	976|Bacteroidetes	S	Protein of unknown function (DUF1624)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1624
BYD3_k127_5976080_1	700598.Niako_2356	4.134e-151	489.0	COG5549@1|root,COG5549@2|Bacteria,4NEA0@976|Bacteroidetes,1IQA8@117747|Sphingobacteriia	976|Bacteroidetes	O	Domain of unknown function (DUF5118)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4953,DUF5117,DUF5118
BYD3_k127_6015699_3	1237149.C900_04088	1.135e-139	463.0	COG0577@1|root,COG0577@2|Bacteria,4NDUK@976|Bacteroidetes,47JYF@768503|Cytophagia	976|Bacteroidetes	V	MacB-like periplasmic core domain	-	-	-	-	-	-	-	-	-	-	-	-	FtsX,MacB_PCD
BYD3_k127_6015699_5	1047013.AQSP01000134_gene1348	4.569e-08	57.0	COG0577@1|root,COG0577@2|Bacteria	2|Bacteria	V	efflux transmembrane transporter activity	-	-	-	ko:K02004	-	M00258	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	FtsX,MacB_PCD
BYD3_k127_6015699_1	1237149.C900_04087	1.997e-238	758.0	COG0577@1|root,COG0577@2|Bacteria,4NDUK@976|Bacteroidetes	976|Bacteroidetes	V	permease	-	-	-	ko:K02004	-	M00258	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	FtsX,MacB_PCD
BYD3_k127_6015699_0	1237149.C900_03297	2.025e-263	829.0	COG3590@1|root,COG3590@2|Bacteria,4NEYB@976|Bacteroidetes,47JHJ@768503|Cytophagia	976|Bacteroidetes	O	PFAM peptidase M13	pepO	-	3.4.24.71	ko:K01415,ko:K07386	-	-	-	-	ko00000,ko01000,ko01002,ko04147	-	-	-	Peptidase_M13,Peptidase_M13_N
BYD3_k127_6015699_2	1237149.C900_03299	3.555e-186	595.0	COG0147@1|root,COG0147@2|Bacteria,4NFQ5@976|Bacteroidetes,47JMA@768503|Cytophagia	976|Bacteroidetes	EH	Anthranilate synthase component I, N terminal region	trpE	-	4.1.3.27	ko:K01657	ko00400,ko00405,ko01100,ko01110,ko01130,ko01230,ko02024,ko02025,map00400,map00405,map01100,map01110,map01130,map01230,map02024,map02025	M00023	R00985,R00986	RC00010,RC02148,RC02414	ko00000,ko00001,ko00002,ko01000	-	-	-	Anth_synt_I_N,Chorismate_bind
BYD3_k127_6015699_4	926556.Echvi_2505	7.996e-37	142.0	COG0399@1|root,COG0399@2|Bacteria,4NSX7@976|Bacteroidetes,47SM9@768503|Cytophagia	976|Bacteroidetes	M	23S rRNA-intervening sequence protein	-	-	-	-	-	-	-	-	-	-	-	-	23S_rRNA_IVP
BYD3_k127_6023261_4	1123248.KB893340_gene2679	4.889e-23	99.0	COG0500@1|root,COG2226@2|Bacteria,4NEUC@976|Bacteroidetes,1IP66@117747|Sphingobacteriia	976|Bacteroidetes	Q	Methylase involved in ubiquinone menaquinone biosynthesis	arsM	-	2.1.1.137	ko:K07755	-	-	-	-	ko00000,ko01000	-	-	-	Methyltransf_11,Methyltransf_31
BYD3_k127_6023261_0	1121898.Q766_02915	6.588e-125	404.0	COG0639@1|root,COG0639@2|Bacteria,4NFPU@976|Bacteroidetes,1IIYZ@117743|Flavobacteriia,2NVCK@237|Flavobacterium	976|Bacteroidetes	T	Serine threonine protein	-	-	-	-	-	-	-	-	-	-	-	-	Metallophos_2
BYD3_k127_6023261_2	1279009.ADICEAN_01840	5.186e-48	191.0	COG4099@1|root,COG4733@1|root,COG4099@2|Bacteria,COG4733@2|Bacteria	2|Bacteria	S	cellulase activity	-	-	-	-	-	-	-	-	-	-	-	-	Abhydrolase_2,Abhydrolase_8,DLH,fn3
BYD3_k127_6023261_3	1123248.KB893326_gene1464	1.514e-24	106.0	COG3794@1|root,COG3794@2|Bacteria,4NUWE@976|Bacteroidetes,1IZMB@117747|Sphingobacteriia	976|Bacteroidetes	C	Cupredoxin-like domain	-	-	-	-	-	-	-	-	-	-	-	-	Copper-bind,Cupredoxin_1
BYD3_k127_6023261_1	886377.Murru_2648	2.328e-50	182.0	COG3652@1|root,COG3652@2|Bacteria,4NP09@976|Bacteroidetes,1I2DD@117743|Flavobacteriia	976|Bacteroidetes	S	Domain of unknown function (DUF4142)	-	-	-	ko:K08995	-	-	-	-	ko00000	-	-	-	DUF4142
BYD3_k127_6029504_1	1123248.KB893326_gene1336	2.296e-142	454.0	COG2120@1|root,COG2120@2|Bacteria,4NEDJ@976|Bacteroidetes,1IV4B@117747|Sphingobacteriia	976|Bacteroidetes	S	GlcNAc-PI de-N-acetylase	-	-	-	-	-	-	-	-	-	-	-	-	PIG-L
BYD3_k127_6029504_6	700598.Niako_5915	6.757e-44	163.0	COG5531@1|root,COG5531@2|Bacteria	2|Bacteria	B	SWIB/MDM2 domain	-	-	5.99.1.2	ko:K03169	-	-	-	-	ko00000,ko01000,ko03032	-	-	-	SWIB,Topoisom_bac,Toprim,Toprim_Crpt
BYD3_k127_6029504_4	1121875.KB907547_gene3399	4.628e-90	304.0	COG1082@1|root,COG1082@2|Bacteria,4NM4N@976|Bacteroidetes	976|Bacteroidetes	G	Xylose isomerase-like TIM barrel	-	-	-	-	-	-	-	-	-	-	-	-	AP_endonuc_2
BYD3_k127_6029504_0	1123248.KB893326_gene1470	6.298e-223	697.0	COG2271@1|root,COG2271@2|Bacteria,4NGXW@976|Bacteroidetes,1IV4E@117747|Sphingobacteriia	976|Bacteroidetes	G	Uncharacterised MFS-type transporter YbfB	-	-	-	-	-	-	-	-	-	-	-	-	MFS_1
BYD3_k127_6029504_5	929703.KE386491_gene1528	3.812e-56	201.0	COG0204@1|root,COG0204@2|Bacteria,4NNG7@976|Bacteroidetes,47Q72@768503|Cytophagia	976|Bacteroidetes	I	Acyltransferase	-	-	-	-	-	-	-	-	-	-	-	-	Acyltransferase
BYD3_k127_6029504_2	1121904.ARBP01000004_gene812	1.162e-128	428.0	COG0642@1|root,COG2205@2|Bacteria,4NUBB@976|Bacteroidetes	976|Bacteroidetes	T	GHKL domain	-	-	-	-	-	-	-	-	-	-	-	-	HATPase_c,HisKA
BYD3_k127_6029504_3	1121904.ARBP01000002_gene6976	9.115e-95	315.0	COG0745@1|root,COG0745@2|Bacteria,4NGXP@976|Bacteroidetes	976|Bacteroidetes	T	Two component transcriptional regulator, winged helix family	-	-	-	ko:K07658	ko02020,map02020	M00434	-	-	ko00000,ko00001,ko00002,ko02022	-	-	-	Response_reg,Trans_reg_C
BYD3_k127_6035326_0	1237149.C900_05488	0.0	2121.0	COG2373@1|root,COG2373@2|Bacteria,4NEW9@976|Bacteroidetes,47MDC@768503|Cytophagia	976|Bacteroidetes	S	Alpha-2-Macroglobulin	-	-	-	ko:K06894	-	-	-	-	ko00000	-	-	-	A2M,A2M_N,A2M_N_2,MG1,Thiol-ester_cl
BYD3_k127_6041174_13	525373.HMPREF0766_13818	4.369e-20	92.0	COG1073@1|root,COG1073@2|Bacteria,4NFJZ@976|Bacteroidetes,1IR32@117747|Sphingobacteriia	976|Bacteroidetes	S	X-Pro dipeptidyl-peptidase (S15 family)	-	-	-	ko:K06889	-	-	-	-	ko00000	-	-	-	AXE1,DLH,Peptidase_S15
BYD3_k127_6041174_6	1131812.JQMS01000001_gene2319	1.812e-89	299.0	COG0110@1|root,COG0110@2|Bacteria,4NH27@976|Bacteroidetes,1IIUP@117743|Flavobacteriia,2P0G8@237|Flavobacterium	976|Bacteroidetes	S	Hexapeptide repeat of succinyl-transferase	-	-	-	-	-	-	-	-	-	-	-	-	Hexapep,Hexapep_2
BYD3_k127_6041174_14	485918.Cpin_4042	2.808e-16	87.0	COG2207@1|root,COG2207@2|Bacteria,4NEHD@976|Bacteroidetes	976|Bacteroidetes	K	transcriptional regulator	-	-	-	-	-	-	-	-	-	-	-	-	AraC_binding,HTH_18
BYD3_k127_6041174_4	504472.Slin_1949	7.859e-115	378.0	COG2207@1|root,COG2207@2|Bacteria,4NEHD@976|Bacteroidetes,47KI7@768503|Cytophagia	976|Bacteroidetes	K	Transcriptional regulator, AraC family	-	-	-	-	-	-	-	-	-	-	-	-	HTH_18
BYD3_k127_6041174_7	1123057.P872_20310	7.369e-89	299.0	2CJWE@1|root,30Y1E@2|Bacteria,4NNQQ@976|Bacteroidetes	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_6041174_12	1121957.ATVL01000014_gene1511	4.217e-23	99.0	COG2085@1|root,COG2085@2|Bacteria,4NQ1G@976|Bacteroidetes,47Q30@768503|Cytophagia	976|Bacteroidetes	S	NADP oxidoreductase coenzyme F420-dependent	-	-	1.5.1.40	ko:K06988	-	-	-	-	ko00000,ko01000	-	-	-	F420_oxidored
BYD3_k127_6041174_0	313606.M23134_07119	3.429e-291	914.0	COG1629@1|root,COG4771@2|Bacteria,4NE4M@976|Bacteroidetes,47Y3C@768503|Cytophagia	976|Bacteroidetes	P	Carboxypeptidase regulatory-like domain	-	-	-	-	-	-	-	-	-	-	-	-	CarbopepD_reg_2,Plug,TonB_dep_Rec
BYD3_k127_6041174_5	504487.JCM19302_927	2.274e-106	361.0	COG2335@1|root,COG2335@2|Bacteria,4NH49@976|Bacteroidetes,1HXZS@117743|Flavobacteriia	976|Bacteroidetes	M	Secreted and surface protein containing fasciclin-like repeats	-	-	-	-	-	-	-	-	-	-	-	-	Fasciclin
BYD3_k127_6041174_8	1121904.ARBP01000003_gene6139	1.393e-85	295.0	COG3275@1|root,COG3275@2|Bacteria,4PN8S@976|Bacteroidetes,47PB8@768503|Cytophagia	976|Bacteroidetes	T	Histidine kinase	-	-	-	-	-	-	-	-	-	-	-	-	His_kinase
BYD3_k127_6041174_10	1121904.ARBP01000003_gene6138	1.73e-71	250.0	COG3279@1|root,COG3279@2|Bacteria,4NGBF@976|Bacteroidetes,47MTX@768503|Cytophagia	976|Bacteroidetes	KT	Response regulator of the LytR AlgR family	-	-	-	-	-	-	-	-	-	-	-	-	LytTR,Response_reg
BYD3_k127_6041174_11	1121904.ARBP01000003_gene6137	1.447e-24	107.0	2CFU8@1|root,2ZXDP@2|Bacteria,4P8HP@976|Bacteroidetes,47WQV@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_6041174_9	1121904.ARBP01000040_gene520	1.062e-75	262.0	COG1309@1|root,COG1309@2|Bacteria,4NEUA@976|Bacteroidetes,47P97@768503|Cytophagia	976|Bacteroidetes	K	Bacterial regulatory proteins, tetR family	-	-	-	-	-	-	-	-	-	-	-	-	TetR_N
BYD3_k127_6041174_1	1237149.C900_02636	4.651e-227	724.0	COG2274@1|root,COG2274@2|Bacteria,4NFJF@976|Bacteroidetes,47K3G@768503|Cytophagia	976|Bacteroidetes	V	PFAM ABC transporter	-	-	-	-	-	-	-	-	-	-	-	-	ABC_membrane,ABC_tran
BYD3_k127_6041174_2	1237149.C900_02637	2.784e-140	457.0	COG0845@1|root,COG0845@2|Bacteria,4NFEK@976|Bacteroidetes,47JV7@768503|Cytophagia	976|Bacteroidetes	M	Biotin-lipoyl like	-	-	-	-	-	-	-	-	-	-	-	-	Biotin_lipoyl_2,HlyD_3,OEP
BYD3_k127_6041174_3	1237149.C900_02638	4.452e-129	429.0	COG1538@1|root,COG1538@2|Bacteria,4NEH3@976|Bacteroidetes,47JKK@768503|Cytophagia	976|Bacteroidetes	MU	PFAM Outer membrane efflux protein	-	-	-	-	-	-	-	-	-	-	-	-	OEP
BYD3_k127_6055899_2	1500281.JQKZ01000018_gene255	2.542e-61	219.0	COG0504@1|root,COG0504@2|Bacteria,4PH1C@976|Bacteroidetes,1IMA9@117743|Flavobacteriia,3ZR4F@59732|Chryseobacterium	976|Bacteroidetes	F	Glutamine amidotransferase class-I	-	-	-	-	-	-	-	-	-	-	-	-	GATase
BYD3_k127_6055899_0	1121904.ARBP01000006_gene3700	1.579e-136	442.0	COG0117@1|root,COG1985@1|root,COG0117@2|Bacteria,COG1985@2|Bacteria,4NFJE@976|Bacteroidetes,47KBG@768503|Cytophagia	976|Bacteroidetes	H	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate	ribD	-	1.1.1.193,3.5.4.26	ko:K11752	ko00740,ko01100,ko01110,ko02024,map00740,map01100,map01110,map02024	M00125	R03458,R03459	RC00204,RC00933	ko00000,ko00001,ko00002,ko01000	-	-	-	RibD_C,dCMP_cyt_deam_1
BYD3_k127_6055899_1	1048983.EL17_13570	5.177e-70	247.0	COG2890@1|root,COG2890@2|Bacteria,4NDZB@976|Bacteroidetes,47PXV@768503|Cytophagia	976|Bacteroidetes	J	Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif	prmC	GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0008152,GO:0008168,GO:0008757,GO:0016740,GO:0016741,GO:0032259,GO:0044424,GO:0044444,GO:0044464	2.1.1.297	ko:K02493	-	-	R10806	RC00003,RC03279	ko00000,ko01000,ko03012	-	-	-	MTS
BYD3_k127_6055899_3	1237149.C900_02789	3.589e-40	150.0	COG5495@1|root,COG5495@2|Bacteria,4NI4M@976|Bacteroidetes,47MAX@768503|Cytophagia	976|Bacteroidetes	S	NADP oxidoreductase coenzyme F420-dependent	-	-	-	-	-	-	-	-	-	-	-	-	DUF2520,F420_oxidored,Rossmann-like
BYD3_k127_6057916_4	1123248.KB893317_gene4411	2.251e-09	59.0	2ESD2@1|root,33JXU@2|Bacteria,4NXJ7@976|Bacteroidetes	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_6057916_1	1279009.ADICEAN_03104	8.659e-44	168.0	COG3103@1|root,COG3103@2|Bacteria,4NIH7@976|Bacteroidetes,47P4Z@768503|Cytophagia	976|Bacteroidetes	T	Sh3 type 3 domain protein	-	-	-	-	-	-	-	-	-	-	-	-	SH3_3,SH3_4
BYD3_k127_6057916_2	1500281.JQKZ01000013_gene389	3.73e-40	152.0	2CCSR@1|root,32RWC@2|Bacteria,4NSDM@976|Bacteroidetes,1I40W@117743|Flavobacteriia,3ZSWC@59732|Chryseobacterium	976|Bacteroidetes	S	23S rRNA-intervening sequence protein	-	-	-	-	-	-	-	-	-	-	-	-	23S_rRNA_IVP
BYD3_k127_6057916_0	1123248.KB893334_gene2751	1.294e-213	675.0	COG1506@1|root,COG1506@2|Bacteria	2|Bacteria	E	serine-type peptidase activity	-	-	-	-	-	-	-	-	-	-	-	-	Tannase
BYD3_k127_6057916_3	935837.JAEK01000013_gene4938	9.442e-29	130.0	COG4948@1|root,COG4948@2|Bacteria,1V715@1239|Firmicutes,4HUPX@91061|Bacilli	91061|Bacilli	M	PFAM Mandelate racemase muconate lactonizing	-	-	-	-	-	-	-	-	-	-	-	-	MR_MLE_C
BYD3_k127_6070390_3	509635.N824_25175	2.857e-61	237.0	COG2982@1|root,COG2982@2|Bacteria,4NHD3@976|Bacteroidetes,1IQUD@117747|Sphingobacteriia	976|Bacteroidetes	M	AsmA family	-	-	-	-	-	-	-	-	-	-	-	-	AsmA,AsmA_2,DUF3971
BYD3_k127_6070390_1	509635.N824_27040	3.356e-197	634.0	COG4733@1|root,COG4733@2|Bacteria,4NK9Y@976|Bacteroidetes	976|Bacteroidetes	S	Protein of unknown function (DUF2961)	-	-	-	-	-	-	-	-	-	-	-	-	DUF2961
BYD3_k127_6070390_2	1121931.AUHG01000010_gene431	1.52e-94	323.0	2C8CV@1|root,2Z8NV@2|Bacteria,4NH60@976|Bacteroidetes,1HZCW@117743|Flavobacteriia	976|Bacteroidetes	S	Protein of unknown function (DUF3095)	-	-	-	-	-	-	-	-	-	-	-	-	DUF3095
BYD3_k127_6070390_0	1123277.KB893180_gene2467	5.084e-205	642.0	COG0626@1|root,COG0626@2|Bacteria,4PKE6@976|Bacteroidetes,47KC8@768503|Cytophagia	976|Bacteroidetes	E	Catalyzes the formation of L-homocysteine from O- succinyl-L-homoserine (OSHS) and hydrogen sulfide	-	-	2.5.1.48,4.4.1.8	ko:K01739,ko:K01760	ko00270,ko00450,ko00920,ko01100,ko01110,ko01130,ko01230,map00270,map00450,map00920,map01100,map01110,map01130,map01230	M00017	R00782,R00999,R01286,R01288,R02408,R02508,R03217,R03260,R04941,R04944,R04945,R04946	RC00020,RC00056,RC00069,RC00382,RC00420,RC00488,RC00710,RC01245,RC02303,RC02848,RC02866	ko00000,ko00001,ko00002,ko01000	-	-	-	Cys_Met_Meta_PP
BYD3_k127_6071254_2	1279009.ADICEAN_03768	1.864e-101	336.0	COG0247@1|root,COG0277@1|root,COG0247@2|Bacteria,COG0277@2|Bacteria,4NEK3@976|Bacteroidetes,47JNC@768503|Cytophagia	976|Bacteroidetes	C	FAD linked oxidases, C-terminal domain	-	-	-	-	-	-	-	-	-	-	-	-	FAD-oxidase_C,FAD_binding_4,Fer4_17,Fer4_8
BYD3_k127_6071254_0	1123248.KB893321_gene478	5e-324	1005.0	COG4993@1|root,COG4993@2|Bacteria,4NFK0@976|Bacteroidetes,1IQUR@117747|Sphingobacteriia	976|Bacteroidetes	C	Pyrrolo-quinoline quinone	-	-	-	-	-	-	-	-	-	-	-	-	Cytochrome_CBB3,PQQ
BYD3_k127_6071254_3	926549.KI421517_gene1026	4.445e-18	91.0	COG3584@1|root,COG3584@2|Bacteria,4PBIE@976|Bacteroidetes,47VXW@768503|Cytophagia	976|Bacteroidetes	S	3D domain protein	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_6071254_1	929562.Emtol_3340	3.313e-130	422.0	COG3386@1|root,COG3386@2|Bacteria,4NF4A@976|Bacteroidetes,47JC9@768503|Cytophagia	976|Bacteroidetes	G	PFAM SMP-30 Gluconolaconase	-	-	3.1.1.17	ko:K01053	ko00030,ko00053,ko00930,ko01100,ko01110,ko01120,ko01130,ko01200,ko01220,map00030,map00053,map00930,map01100,map01110,map01120,map01130,map01200,map01220	M00129	R01519,R02933,R03751	RC00537,RC00983	ko00000,ko00001,ko00002,ko01000,ko04147	-	-	-	Pectate_lyase_3,SGL
BYD3_k127_6074675_8	1237149.C900_04456	1.003e-12	72.0	2DREE@1|root,33BDM@2|Bacteria,4NXHP@976|Bacteroidetes	976|Bacteroidetes	S	Putative Actinobacterial Holin-X, holin superfamily III	-	-	-	-	-	-	-	-	-	-	-	-	Phage_holin_3_6
BYD3_k127_6074675_5	1124780.ANNU01000052_gene3570	3.556e-94	315.0	COG1646@1|root,COG1646@2|Bacteria,4NER8@976|Bacteroidetes,47MXM@768503|Cytophagia	976|Bacteroidetes	I	Prenyltransferase that catalyzes the transfer of the geranylgeranyl moiety of geranylgeranyl diphosphate (GGPP) to the C3 hydroxyl of sn-glycerol-1-phosphate (G1P)	pcrB	-	-	ko:K07094	-	-	-	-	ko00000,ko01000	-	-	-	PcrB
BYD3_k127_6074675_7	926549.KI421517_gene773	5.613e-53	194.0	COG2318@1|root,COG2318@2|Bacteria,4NN7V@976|Bacteroidetes,47QXV@768503|Cytophagia	976|Bacteroidetes	S	DinB family	-	-	-	-	-	-	-	-	-	-	-	-	DinB,DinB_2
BYD3_k127_6074675_1	1279009.ADICEAN_00512	1.222e-233	738.0	COG0308@1|root,COG0308@2|Bacteria,4NFT0@976|Bacteroidetes,47M3W@768503|Cytophagia	976|Bacteroidetes	E	Leukotriene A4 hydrolase, C-terminal	-	-	-	-	-	-	-	-	-	-	-	-	Leuk-A4-hydro_C,Peptidase_M1
BYD3_k127_6074675_2	1120968.AUBX01000011_gene3159	2.464e-219	687.0	COG1960@1|root,COG1960@2|Bacteria,4NFII@976|Bacteroidetes,47NCG@768503|Cytophagia	976|Bacteroidetes	I	Acyl-CoA dehydrogenase, C-terminal domain	gcdH	-	1.3.8.6	ko:K00252	ko00071,ko00310,ko00362,ko00380,ko01100,ko01120,ko01130,map00071,map00310,map00362,map00380,map01100,map01120,map01130	M00032	R02487,R02488,R10074	RC00052,RC00156	ko00000,ko00001,ko00002,ko01000	-	-	-	Acyl-CoA_dh_1,Acyl-CoA_dh_M,Acyl-CoA_dh_N
BYD3_k127_6074675_0	1089547.KB913013_gene4105	7.187e-281	872.0	COG2382@1|root,COG2382@2|Bacteria,4NGBK@976|Bacteroidetes,47K7D@768503|Cytophagia	976|Bacteroidetes	P	esterase	-	-	-	-	-	-	-	-	-	-	-	-	Esterase
BYD3_k127_6074675_6	1237149.C900_02113	1.379e-69	246.0	COG0823@1|root,COG0823@2|Bacteria,4PME8@976|Bacteroidetes,47Y2Q@768503|Cytophagia	976|Bacteroidetes	U	Involved in the tonB-independent uptake of proteins	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_6074675_3	1267211.KI669560_gene1776	1.169e-171	549.0	COG0534@1|root,COG0534@2|Bacteria,4NFIR@976|Bacteroidetes,1IXI6@117747|Sphingobacteriia	976|Bacteroidetes	V	MatE	-	-	-	-	-	-	-	-	-	-	-	-	MatE
BYD3_k127_6074675_4	1237149.C900_01521	2.623e-116	379.0	COG0334@1|root,COG0334@2|Bacteria,4NEBH@976|Bacteroidetes,47MQD@768503|Cytophagia	976|Bacteroidetes	E	Belongs to the Glu Leu Phe Val dehydrogenases family	gdh	GO:0003674,GO:0003824,GO:0004353,GO:0004354,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006536,GO:0006537,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009986,GO:0009987,GO:0016053,GO:0016491,GO:0016638,GO:0016639,GO:0019752,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0055114,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607	1.4.1.4	ko:K00262	ko00220,ko00250,ko00910,ko01100,map00220,map00250,map00910,map01100	-	R00248	RC00006,RC02799	ko00000,ko00001,ko01000	-	-	-	ELFV_dehydrog,ELFV_dehydrog_N
BYD3_k127_6080470_4	1237149.C900_02181	3.096e-110	359.0	COG2204@1|root,COG2204@2|Bacteria,4NE72@976|Bacteroidetes,47KVF@768503|Cytophagia	976|Bacteroidetes	T	CheY-like receiver AAA-type ATPase and DNA-binding domains	porX	-	-	-	-	-	-	-	-	-	-	-	PglZ,Response_reg
BYD3_k127_6080470_7	714943.Mucpa_2741	1.496e-42	161.0	COG0802@1|root,COG0802@2|Bacteria,4NS89@976|Bacteroidetes,1ISTA@117747|Sphingobacteriia	976|Bacteroidetes	S	PFAM Uncharacterised protein family UPF0079, ATPase	yjeE	-	-	ko:K06925	-	-	-	-	ko00000,ko03016	-	-	-	TsaE
BYD3_k127_6080470_2	1237149.C900_02179	9.414e-173	547.0	COG0686@1|root,COG0686@2|Bacteria,4NE8F@976|Bacteroidetes,47J94@768503|Cytophagia	976|Bacteroidetes	E	PFAM Alanine dehydrogenase PNT, C-terminal domain	ald	-	1.4.1.1	ko:K00259	ko00250,ko00430,ko01100,map00250,map00430,map01100	-	R00396	RC00008	ko00000,ko00001,ko01000	-	-	-	AlaDh_PNT_C,AlaDh_PNT_N
BYD3_k127_6080470_8	1237149.C900_02179	4.633e-19	86.0	COG0686@1|root,COG0686@2|Bacteria,4NE8F@976|Bacteroidetes,47J94@768503|Cytophagia	976|Bacteroidetes	E	PFAM Alanine dehydrogenase PNT, C-terminal domain	ald	-	1.4.1.1	ko:K00259	ko00250,ko00430,ko01100,map00250,map00430,map01100	-	R00396	RC00008	ko00000,ko00001,ko01000	-	-	-	AlaDh_PNT_C,AlaDh_PNT_N
BYD3_k127_6080470_0	1237149.C900_02176	0.0	1275.0	COG0525@1|root,COG0525@2|Bacteria,4NETB@976|Bacteroidetes,47JHX@768503|Cytophagia	976|Bacteroidetes	J	amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner	valS	GO:0003674,GO:0003824,GO:0004812,GO:0004832,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006438,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576	6.1.1.9	ko:K01873	ko00970,map00970	M00359,M00360	R03665	RC00055,RC00523	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	-	-	-	Anticodon_1,Val_tRNA-synt_C,tRNA-synt_1
BYD3_k127_6080470_5	643867.Ftrac_0610	3.04e-83	289.0	COG2211@1|root,COG2211@2|Bacteria,4NTP1@976|Bacteroidetes,47UKC@768503|Cytophagia	976|Bacteroidetes	G	Major facilitator Superfamily	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_6080470_3	929556.Solca_0342	1.238e-137	451.0	COG0144@1|root,COG3270@1|root,COG0144@2|Bacteria,COG3270@2|Bacteria,4NEV7@976|Bacteroidetes,1IPRI@117747|Sphingobacteriia	976|Bacteroidetes	J	PFAM Bacterial Fmu (Sun) eukaryotic nucleolar NOL1 Nop2p	rsmF	-	-	-	-	-	-	-	-	-	-	-	Methyltr_RsmB-F,Methyltr_RsmF_N,Methyltranf_PUA
BYD3_k127_6080470_1	1237149.C900_04904	1.296e-195	622.0	COG0179@1|root,COG0179@2|Bacteria,4NGI0@976|Bacteroidetes,47KTT@768503|Cytophagia	976|Bacteroidetes	Q	fumarylacetoacetate (FAA) hydrolase	fahA	-	3.7.1.2	ko:K01555	ko00350,ko00643,ko01100,ko01120,map00350,map00643,map01100,map01120	M00044	R01364	RC00326,RC00446	ko00000,ko00001,ko00002,ko01000,ko04147	-	-	-	FAA_hydrolase,FAA_hydrolase_N
BYD3_k127_6080470_9	761193.Runsl_4018	6.091e-16	84.0	2AT94@1|root,31IS1@2|Bacteria,4NR1S@976|Bacteroidetes,47QPI@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_6080470_6	1237149.C900_04903	9.619e-67	230.0	COG1853@1|root,COG1853@2|Bacteria,4NF4H@976|Bacteroidetes,47KXZ@768503|Cytophagia	976|Bacteroidetes	S	PFAM Flavin reductase like domain	-	-	-	-	-	-	-	-	-	-	-	-	Flavin_Reduct
BYD3_k127_6092478_3	1237149.C900_05115	6.23e-21	93.0	COG0663@1|root,COG0663@2|Bacteria,4NG6R@976|Bacteroidetes,47PIB@768503|Cytophagia	976|Bacteroidetes	S	carbonic anhydrase acetyltransferase	dapH	-	-	-	-	-	-	-	-	-	-	-	Hexapep
BYD3_k127_6092478_1	1237149.C900_05111	4.212e-64	224.0	28Q4Y@1|root,2ZCN1@2|Bacteria,4NRPX@976|Bacteroidetes,47P9K@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_6092478_2	1237149.C900_05109	2.18e-53	194.0	COG2825@1|root,COG2825@2|Bacteria,4NQGG@976|Bacteroidetes,47MRT@768503|Cytophagia	976|Bacteroidetes	M	PFAM Outer membrane chaperone Skp (OmpH)	-	-	-	ko:K06142	-	-	-	-	ko00000	-	-	-	OmpH
BYD3_k127_6092478_0	1237149.C900_05108	5e-324	1023.0	COG1413@1|root,COG1413@2|Bacteria,4PKPI@976|Bacteroidetes,47NQS@768503|Cytophagia	976|Bacteroidetes	C	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein	-	-	-	-	-	-	-	-	-	-	-	-	HEAT_2,cNMP_binding
BYD3_k127_6092478_4	1120968.AUBX01000009_gene568	0.0001475	44.0	2DDKA@1|root,2ZIEQ@2|Bacteria,4P85D@976|Bacteroidetes	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_6097453_1	391603.FBALC1_04537	2.385e-245	781.0	COG0577@1|root,COG0577@2|Bacteria,4NDUK@976|Bacteroidetes,1I08U@117743|Flavobacteriia	976|Bacteroidetes	V	COG0577 ABC-type antimicrobial peptide transport system permease component	-	-	-	-	-	-	-	-	-	-	-	-	FtsX,MacB_PCD
BYD3_k127_6097453_4	1121373.KB903644_gene3380	1.772e-67	243.0	COG0642@1|root,COG2205@2|Bacteria,4NG0Y@976|Bacteroidetes,47JUV@768503|Cytophagia	976|Bacteroidetes	T	Histidine kinase	-	-	-	-	-	-	-	-	-	-	-	-	HATPase_c,HisKA,PAS_4,PAS_9,Response_reg
BYD3_k127_6097453_2	1237149.C900_05801	3.137e-189	601.0	COG0486@1|root,COG0486@2|Bacteria,4NECT@976|Bacteroidetes,47JRR@768503|Cytophagia	976|Bacteroidetes	S	Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34	mnmE	-	-	ko:K03650	-	-	R08701	RC00053,RC00209,RC00870	ko00000,ko01000,ko03016	-	-	-	MMR_HSR1,MnmE_helical,TrmE_N
BYD3_k127_6097453_0	1341181.FLJC2902T_03730	4.948e-249	783.0	COG0589@1|root,COG1914@1|root,COG0589@2|Bacteria,COG1914@2|Bacteria,4NENE@976|Bacteroidetes,1HXXF@117743|Flavobacteriia,2NTC3@237|Flavobacterium	976|Bacteroidetes	PT	H( )-stimulated, divalent metal cation uptake system	mntH	-	-	ko:K03322	-	-	-	-	ko00000,ko02000	2.A.55.2.6,2.A.55.3	-	-	Nramp,Usp
BYD3_k127_6097453_3	1237149.C900_05811	1.946e-84	286.0	COG1321@1|root,COG1321@2|Bacteria,4NGUP@976|Bacteroidetes,47JSQ@768503|Cytophagia	976|Bacteroidetes	K	Iron dependent repressor, metal binding and dimerisation domain	-	-	-	ko:K03709	-	-	-	-	ko00000,ko03000	-	-	-	Fe_dep_repr_C,Fe_dep_repress,FeoA
BYD3_k127_6097453_5	926560.KE387023_gene1536	1.174e-29	134.0	2DM74@1|root,320F4@2|Bacteria,1WM91@1297|Deinococcus-Thermus	1297|Deinococcus-Thermus	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_6106752_2	755732.Fluta_2782	1.738e-78	269.0	COG1807@1|root,COG1807@2|Bacteria,4NXAC@976|Bacteroidetes	976|Bacteroidetes	M	Dolichyl-phosphate-mannose-protein mannosyltransferase	-	-	-	-	-	-	-	-	-	-	-	-	PMT_2
BYD3_k127_6106752_0	1123248.KB893332_gene2278	1.876e-140	457.0	COG0477@1|root,COG0477@2|Bacteria,4PKN6@976|Bacteroidetes,1J0M5@117747|Sphingobacteriia	976|Bacteroidetes	EGP	PFAM Major Facilitator Superfamily	-	-	-	-	-	-	-	-	-	-	-	-	MFS_1
BYD3_k127_6106752_3	1122603.ATVI01000005_gene3497	1.209e-44	185.0	COG5616@1|root,COG5616@2|Bacteria,1NSKC@1224|Proteobacteria,1T49A@1236|Gammaproteobacteria	1236|Gammaproteobacteria	S	cAMP biosynthetic process	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_6106752_1	926569.ANT_29640	1.536e-99	335.0	COG0407@1|root,COG0407@2|Bacteria	2|Bacteria	H	Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III	-	-	4.1.1.37	ko:K01599	ko00860,ko01100,ko01110,map00860,map01100,map01110	M00121	R03197,R04972	RC00872	ko00000,ko00001,ko00002,ko01000	-	-	-	URO-D
BYD3_k127_6106752_5	1085623.GNIT_3598	7.645e-07	51.0	COG1228@1|root,COG1228@2|Bacteria,1MVAF@1224|Proteobacteria,1RQRP@1236|Gammaproteobacteria,4653Y@72275|Alteromonadaceae	1236|Gammaproteobacteria	Q	COG1228 Imidazolonepropionase and related amidohydrolases	-	-	-	-	-	-	-	-	-	-	-	-	Amidohydro_1
BYD3_k127_6106752_4	504472.Slin_2318	1.536e-07	53.0	COG1228@1|root,COG1228@2|Bacteria	2|Bacteria	Q	imidazolonepropionase activity	-	-	-	-	-	-	-	-	-	-	-	-	Amidohydro_1
BYD3_k127_6115904_8	1123277.KB893179_gene3096	1.045e-08	59.0	COG2010@1|root,COG2010@2|Bacteria,4NN91@976|Bacteroidetes,47PSM@768503|Cytophagia	976|Bacteroidetes	C	Haem-binding domain	-	-	-	-	-	-	-	-	-	-	-	-	Haem_bd
BYD3_k127_6115904_7	1279009.ADICEAN_03679	3.598e-14	73.0	COG0640@1|root,COG0640@2|Bacteria,4NUW3@976|Bacteroidetes,47RXB@768503|Cytophagia	976|Bacteroidetes	K	helix_turn_helix, Arsenical Resistance Operon Repressor	-	-	-	ko:K03892	-	-	-	-	ko00000,ko03000	-	-	-	HTH_20,HTH_5
BYD3_k127_6115904_0	694427.Palpr_2652	2.985e-148	477.0	COG1902@1|root,COG1902@2|Bacteria,4NF98@976|Bacteroidetes,2FNNA@200643|Bacteroidia,22W6P@171551|Porphyromonadaceae	976|Bacteroidetes	C	NADH:flavin oxidoreductase / NADH oxidase family	-	-	-	ko:K10680	ko00633,ko01120,map00633,map01120	-	R08014,R08017,R08042	RC00250	ko00000,ko00001,ko01000	-	-	-	Oxidored_FMN
BYD3_k127_6115904_5	264462.Bd3651	1.508e-26	113.0	2DHH9@1|root,2ZZRU@2|Bacteria,1NIVT@1224|Proteobacteria,42X9Y@68525|delta/epsilon subdivisions	1224|Proteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	DoxX
BYD3_k127_6115904_1	926549.KI421517_gene3362	4.922e-90	304.0	COG0115@1|root,COG0115@2|Bacteria,4PJ29@976|Bacteroidetes,47M6P@768503|Cytophagia	976|Bacteroidetes	EH	PFAM Aminotransferase, class IV	-	-	2.6.1.21,2.6.1.42	ko:K00824,ko:K00826	ko00270,ko00280,ko00290,ko00310,ko00330,ko00360,ko00472,ko00473,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00270,map00280,map00290,map00310,map00330,map00360,map00472,map00473,map00770,map01100,map01110,map01130,map01210,map01230	M00019,M00036,M00119,M00570	R01090,R01148,R01214,R01582,R02199,R02459,R02851,R02924,R05053,R10991	RC00006,RC00008,RC00025,RC00036	ko00000,ko00001,ko00002,ko01000,ko01007	-	-	-	Aminotran_4
BYD3_k127_6115904_4	471854.Dfer_3911	2.673e-32	130.0	COG4978@1|root,COG4978@2|Bacteria,4NW58@976|Bacteroidetes,47R2M@768503|Cytophagia	976|Bacteroidetes	KT	Transcriptional regulator	-	-	-	-	-	-	-	-	-	-	-	-	GyrI-like
BYD3_k127_6115904_3	1122604.JONR01000001_gene1981	4.021e-53	191.0	COG3631@1|root,COG3631@2|Bacteria,1MZ0P@1224|Proteobacteria,1S7Z4@1236|Gammaproteobacteria,1X7MA@135614|Xanthomonadales	135614|Xanthomonadales	S	SnoaL-like domain	-	-	-	-	-	-	-	-	-	-	-	-	SnoaL_2
BYD3_k127_6115904_2	1144313.PMI10_03990	1.116e-55	200.0	COG0727@1|root,COG0727@2|Bacteria,4NMJ0@976|Bacteroidetes,1I1AF@117743|Flavobacteriia,2NSF3@237|Flavobacterium	976|Bacteroidetes	S	Putative zinc- or iron-chelating domain	-	-	-	-	-	-	-	-	-	-	-	-	CxxCxxCC
BYD3_k127_6115904_9	1348583.ATLH01000009_gene3266	1.698e-05	54.0	2A47S@1|root,30SSZ@2|Bacteria,4PJBN@976|Bacteroidetes,1IMUK@117743|Flavobacteriia,1FADA@104264|Cellulophaga	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_6115904_6	761193.Runsl_1947	4.19e-23	104.0	COG0577@1|root,COG0577@2|Bacteria,4NDUK@976|Bacteroidetes,47JJN@768503|Cytophagia	976|Bacteroidetes	V	FtsX-like permease family	-	-	-	ko:K02004	-	M00258	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	FtsX,MacB_PCD
BYD3_k127_6139534_1	1123248.KB893316_gene4587	0.0	1151.0	COG0457@1|root,COG0457@2|Bacteria,4NIBU@976|Bacteroidetes,1IQKQ@117747|Sphingobacteriia	976|Bacteroidetes	S	PFAM Tetratricopeptide	-	-	-	-	-	-	-	-	-	-	-	-	DUF5107,TPR_16,TPR_8
BYD3_k127_6139534_5	700598.Niako_5907	6.164e-70	244.0	COG2006@1|root,COG2006@2|Bacteria	2|Bacteria	U	4fe-4S ferredoxin, iron-sulfur binding domain protein	-	-	-	-	-	-	-	-	-	-	-	-	CBM9_1,CBM9_2,DUF362
BYD3_k127_6139534_4	616991.JPOO01000003_gene2353	1.811e-158	510.0	COG1921@1|root,COG1921@2|Bacteria,4NIIG@976|Bacteroidetes,1I090@117743|Flavobacteriia	976|Bacteroidetes	H	L-seryl-tRNA selenium transferase	-	-	2.9.1.1	ko:K01042	ko00450,ko00970,map00450,map00970	-	R08219	RC01246	ko00000,ko00001,ko01000	-	-	-	Aminotran_5,SelA
BYD3_k127_6139534_0	1123248.KB893321_gene472	0.0	1219.0	COG1629@1|root,COG4771@2|Bacteria,4NDU8@976|Bacteroidetes,1IUTQ@117747|Sphingobacteriia	976|Bacteroidetes	P	TonB dependent receptor	-	-	-	-	-	-	-	-	-	-	-	-	CarbopepD_reg_2,Plug,TonB_dep_Rec
BYD3_k127_6139534_3	1123248.KB893321_gene473	1.965e-200	636.0	COG4198@1|root,COG4198@2|Bacteria,4NI11@976|Bacteroidetes,1IQ9Y@117747|Sphingobacteriia	976|Bacteroidetes	S	Starch-binding associating with outer membrane	-	-	-	-	-	-	-	-	-	-	-	-	SusD-like
BYD3_k127_6139534_2	504472.Slin_3980	5.184e-220	700.0	COG4888@1|root,COG4888@2|Bacteria,4NEE8@976|Bacteroidetes,47KJ4@768503|Cytophagia	976|Bacteroidetes	S	ASPIC and UnbV	-	-	-	-	-	-	-	-	-	-	-	-	FG-GAP,UnbV_ASPIC,VCBS
BYD3_k127_6151477_4	1250232.JQNJ01000001_gene449	3.526e-16	80.0	COG1520@1|root,COG1520@2|Bacteria,4NFA9@976|Bacteroidetes,1I4P5@117743|Flavobacteriia	976|Bacteroidetes	S	PQQ-like domain	-	-	-	-	-	-	-	-	-	-	-	-	PQQ,PQQ_2,PQQ_3
BYD3_k127_6151477_2	1550091.JROE01000008_gene3367	7.416e-71	255.0	COG1520@1|root,COG1520@2|Bacteria,4NFA9@976|Bacteroidetes,1ITHY@117747|Sphingobacteriia	976|Bacteroidetes	S	PQQ-like domain	-	-	-	-	-	-	-	-	-	-	-	-	PQQ,PQQ_2,PQQ_3
BYD3_k127_6151477_0	1237149.C900_03659	0.0	1161.0	COG1629@1|root,COG4771@2|Bacteria,4NFJJ@976|Bacteroidetes,47MMW@768503|Cytophagia	976|Bacteroidetes	P	TonB dependent receptor	-	-	-	ko:K02014	-	-	-	-	ko00000,ko02000	1.B.14	-	-	CarbopepD_reg_2,Plug,TonB_dep_Rec
BYD3_k127_6151477_1	1123248.KB893317_gene4292	8.828e-182	576.0	COG0613@1|root,COG0613@2|Bacteria,4PN3D@976|Bacteroidetes	976|Bacteroidetes	S	PHP domain protein	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_6151477_3	1123248.KB893317_gene4292	7.729e-44	163.0	COG0613@1|root,COG0613@2|Bacteria,4PN3D@976|Bacteroidetes	976|Bacteroidetes	S	PHP domain protein	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_6158068_0	1237149.C900_03692	5.987e-302	933.0	COG0034@1|root,COG0034@2|Bacteria,4NFSM@976|Bacteroidetes,47JRN@768503|Cytophagia	976|Bacteroidetes	F	PFAM Glutamine amidotransferase, class-II	purF	-	2.4.2.14	ko:K00764	ko00230,ko00250,ko01100,ko01110,ko01130,map00230,map00250,map01100,map01110,map01130	M00048	R01072	RC00010,RC02724,RC02752	ko00000,ko00001,ko00002,ko01000,ko01002	-	-	-	GATase_6,GATase_7
BYD3_k127_6158068_3	1121904.ARBP01000001_gene5556	3.313e-63	226.0	COG0613@1|root,COG0613@2|Bacteria,4PMUK@976|Bacteroidetes	976|Bacteroidetes	S	PHP domain protein	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_6158068_1	1121904.ARBP01000004_gene799	3.657e-187	595.0	COG3211@1|root,COG3211@2|Bacteria,4NKFU@976|Bacteroidetes,47P4I@768503|Cytophagia	976|Bacteroidetes	S	Bacterial protein of unknown function (DUF839)	-	-	-	ko:K07093	-	-	-	-	ko00000	-	-	-	DUF839
BYD3_k127_6158068_2	1237149.C900_05868	1.955e-115	381.0	COG0859@1|root,COG0859@2|Bacteria,4NEPH@976|Bacteroidetes,47MA4@768503|Cytophagia	976|Bacteroidetes	M	PFAM glycosyl transferase family 9	-	-	-	ko:K02843	ko00540,ko01100,map00540,map01100	M00080	-	-	ko00000,ko00001,ko00002,ko01000,ko01003,ko01005	-	GT9	-	Glyco_transf_9
BYD3_k127_6158068_5	269798.CHU_0082	4.543e-48	175.0	COG2947@1|root,COG2947@2|Bacteria,4NNQG@976|Bacteroidetes,47QAF@768503|Cytophagia	976|Bacteroidetes	S	EVE domain	-	-	-	-	-	-	-	-	-	-	-	-	EVE
BYD3_k127_6158068_4	1237149.C900_05865	3.008e-57	214.0	28KQM@1|root,2ZA8D@2|Bacteria,4NH80@976|Bacteroidetes,47JWY@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_6167436_6	1237149.C900_02736	1.516e-25	111.0	COG1512@1|root,COG1512@2|Bacteria,4NF4P@976|Bacteroidetes,47NDD@768503|Cytophagia	976|Bacteroidetes	S	Beta-propeller domains of methanol dehydrogenase type	-	-	-	ko:K06872	-	-	-	-	ko00000	-	-	-	TPM_phosphatase
BYD3_k127_6167436_0	1237149.C900_02738	2.97e-230	717.0	COG0112@1|root,COG0112@2|Bacteria,4NE30@976|Bacteroidetes,47JWG@768503|Cytophagia	976|Bacteroidetes	E	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism	glyA	-	2.1.2.1	ko:K00600	ko00260,ko00460,ko00630,ko00670,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko01523,map00260,map00460,map00630,map00670,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map01523	M00140,M00141,M00346,M00532	R00945,R09099	RC00022,RC00112,RC01583,RC02958	ko00000,ko00001,ko00002,ko01000	-	-	-	SHMT
BYD3_k127_6167436_1	1237149.C900_02739	1.962e-101	337.0	COG0805@1|root,COG0805@2|Bacteria,4NEKM@976|Bacteroidetes,47KG0@768503|Cytophagia	976|Bacteroidetes	U	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes	tatC	-	-	ko:K03118	ko03060,ko03070,map03060,map03070	M00336	-	-	ko00000,ko00001,ko00002,ko02044	2.A.64	-	-	TatC
BYD3_k127_6167436_4	1237149.C900_02740	4.326e-59	209.0	COG0698@1|root,COG0698@2|Bacteria,4NNSU@976|Bacteroidetes,47PQK@768503|Cytophagia	976|Bacteroidetes	G	Ribose 5-phosphate isomerase	rpiB	-	5.3.1.6	ko:K01808	ko00030,ko00051,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00051,map00710,map01100,map01110,map01120,map01130,map01200,map01230	M00004,M00007,M00165,M00167	R01056,R09030	RC00376,RC00434	ko00000,ko00001,ko00002,ko01000	-	-	-	LacAB_rpiB
BYD3_k127_6167436_3	1237149.C900_02741	3.599e-83	293.0	28H89@1|root,2Z7K8@2|Bacteria,4NEKX@976|Bacteroidetes,47M3Y@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_6167436_5	1237149.C900_02742	5.354e-42	157.0	COG0858@1|root,COG0858@2|Bacteria,4NSQJ@976|Bacteroidetes,47Q35@768503|Cytophagia	976|Bacteroidetes	J	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA	rbfA	-	-	ko:K02834	-	-	-	-	ko00000,ko03009	-	-	-	RBFA
BYD3_k127_6167436_2	1237149.C900_02744	1.052e-90	309.0	COG4591@1|root,COG4591@2|Bacteria,4NG04@976|Bacteroidetes,47M0Q@768503|Cytophagia	976|Bacteroidetes	M	ABC-type transport system involved in lipoprotein release permease component	lolE_2	-	-	ko:K09808,ko:K09815	ko02010,map02010	M00242,M00255	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.125,3.A.1.15.3,3.A.1.15.5	-	-	FtsX,MacB_PCD
BYD3_k127_617980_3	1121481.AUAS01000011_gene5113	4.14e-40	150.0	COG0350@1|root,COG2207@1|root,COG0350@2|Bacteria,COG2207@2|Bacteria,4NFYC@976|Bacteroidetes,47K38@768503|Cytophagia	976|Bacteroidetes	K	PFAM 6-O-methylguanine DNA methyltransferase, DNA binding domain	ada	-	2.1.1.63	ko:K10778	-	-	-	-	ko00000,ko01000,ko03000,ko03400	-	-	-	DNA_binding_1,HTH_18,Methyltransf_1N
BYD3_k127_617980_2	1121904.ARBP01000005_gene4869	3.512e-43	164.0	2CDAN@1|root,3134Z@2|Bacteria,4NNX4@976|Bacteroidetes,47XNP@768503|Cytophagia	976|Bacteroidetes	S	Gluconate 2-dehydrogenase subunit 3	-	-	-	-	-	-	-	-	-	-	-	-	Gluconate_2-dh3
BYD3_k127_617980_0	1123073.KB899241_gene3087	3.591e-254	794.0	COG2303@1|root,COG2303@2|Bacteria,1MU3F@1224|Proteobacteria,1RPBQ@1236|Gammaproteobacteria,1X4F1@135614|Xanthomonadales	135614|Xanthomonadales	E	GMC oxidoreductase	-	-	-	-	-	-	-	-	-	-	-	-	GMC_oxred_C,GMC_oxred_N
BYD3_k127_617980_1	204669.Acid345_4693	7.65e-90	304.0	COG1574@1|root,COG1574@2|Bacteria,3Y2UF@57723|Acidobacteria,2JIRH@204432|Acidobacteriia	57723|Acidobacteria	S	Amidohydrolase family	-	-	-	-	-	-	-	-	-	-	-	-	Amidohydro_3
BYD3_k127_6189803_3	1502724.FF80_03153	1.657e-06	51.0	COG4977@1|root,COG4977@2|Bacteria,1MUDK@1224|Proteobacteria,2TS7I@28211|Alphaproteobacteria,3N8E6@45401|Hyphomicrobiaceae	28211|Alphaproteobacteria	K	DJ-1/PfpI family	MA20_29105	-	-	-	-	-	-	-	-	-	-	-	DJ-1_PfpI,HTH_18
BYD3_k127_6189803_0	935261.JAGL01000061_gene2642	3.102e-76	269.0	COG4638@1|root,COG4638@2|Bacteria,1MWXW@1224|Proteobacteria,2TSJ5@28211|Alphaproteobacteria,43GYK@69277|Phyllobacteriaceae	28211|Alphaproteobacteria	P	Rieske 2Fe-2S	-	-	-	ko:K00479	-	-	-	-	ko00000	-	-	-	Rieske,Ring_hydroxyl_A
BYD3_k127_6189803_2	1121335.Clst_0999	2.927e-25	119.0	COG2211@1|root,COG2211@2|Bacteria,1UIHN@1239|Firmicutes,25ERR@186801|Clostridia	186801|Clostridia	G	Major Facilitator	-	-	-	ko:K05820	-	-	-	-	ko00000,ko02000	2.A.1.27	-	-	MFS_1_like
BYD3_k127_6189803_1	1250232.JQNJ01000001_gene3700	4.919e-29	128.0	COG0457@1|root,COG1506@1|root,COG0457@2|Bacteria,COG1506@2|Bacteria,4PMMI@976|Bacteroidetes,1IKUM@117743|Flavobacteriia	976|Bacteroidetes	E	Dienelactone hydrolase family	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_6191646_1	1121904.ARBP01000053_gene472	2.993e-144	462.0	COG2207@1|root,COG2207@2|Bacteria,4NEHD@976|Bacteroidetes,47KBW@768503|Cytophagia	976|Bacteroidetes	K	Transcriptional regulator, AraC family	-	-	-	-	-	-	-	-	-	-	-	-	HTH_18
BYD3_k127_6191646_0	1123248.KB893316_gene4674	0.0	1154.0	COG1529@1|root,COG1529@2|Bacteria,4NFFU@976|Bacteroidetes,1IPWF@117747|Sphingobacteriia	976|Bacteroidetes	C	COG1529 Aerobic-type carbon monoxide dehydrogenase large subunit CoxL CutL homologs	-	-	1.3.99.16	ko:K07303	-	-	-	-	ko00000,ko01000	-	-	-	Ald_Xan_dh_C2
BYD3_k127_6191646_2	760192.Halhy_0717	3.37e-79	266.0	COG2080@1|root,COG2080@2|Bacteria,4NM72@976|Bacteroidetes,1IWSE@117747|Sphingobacteriia	976|Bacteroidetes	C	[2Fe-2S] binding domain	-	-	1.3.99.16	ko:K07302	-	-	-	-	ko00000,ko01000	-	-	-	Fer2,Fer2_2
BYD3_k127_6191646_4	1121887.AUDK01000030_gene2286	1.147e-22	101.0	COG1073@1|root,COG1073@2|Bacteria,4NFRN@976|Bacteroidetes,1HWSK@117743|Flavobacteriia,2NUEG@237|Flavobacterium	976|Bacteroidetes	S	BAAT / Acyl-CoA thioester hydrolase C terminal	-	-	-	ko:K06889	-	-	-	-	ko00000	-	-	-	Hydrolase_4
BYD3_k127_6191646_3	1123277.KB893172_gene706	7.028e-58	208.0	2CB8F@1|root,34CDS@2|Bacteria,4P8GI@976|Bacteroidetes	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_6191646_5	382464.ABSI01000009_gene3990	3.992e-16	79.0	COG1595@1|root,COG1595@2|Bacteria,46T4N@74201|Verrucomicrobia	74201|Verrucomicrobia	K	TIGRFAM RNA polymerase sigma factor, sigma-70 family	-	-	-	ko:K03088	-	-	-	-	ko00000,ko03021	-	-	-	Sigma70_r2,Sigma70_r4_2
BYD3_k127_6191714_1	1086011.HJ01_03505	1.693e-82	288.0	COG0457@1|root,COG0457@2|Bacteria,4NIUI@976|Bacteroidetes,1HX56@117743|Flavobacteriia,2P0RM@237|Flavobacterium	976|Bacteroidetes	S	Tetratricopeptide repeat	-	-	-	-	-	-	-	-	-	-	-	-	TPR_12,TPR_19,TPR_8
BYD3_k127_6191714_3	700598.Niako_2048	5.563e-60	213.0	28IYJ@1|root,2Z8W9@2|Bacteria,4NJ8H@976|Bacteroidetes,1IXX5@117747|Sphingobacteriia	976|Bacteroidetes	S	Domain of unknown function (DUF4331)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4331
BYD3_k127_6191714_2	1131812.JQMS01000001_gene2336	1.473e-70	245.0	29ZMS@1|root,30MNA@2|Bacteria,4NGT7@976|Bacteroidetes,1HZ2K@117743|Flavobacteriia,2NSNA@237|Flavobacterium	976|Bacteroidetes	S	Domain of unknown function (DUF4331)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4331
BYD3_k127_6191714_4	1279009.ADICEAN_00659	4.025e-56	201.0	COG1595@1|root,COG1595@2|Bacteria,4NMIY@976|Bacteroidetes,47QEF@768503|Cytophagia	976|Bacteroidetes	K	Belongs to the sigma-70 factor family. ECF subfamily	-	-	-	ko:K03088	-	-	-	-	ko00000,ko03021	-	-	-	Sigma70_r2,Sigma70_r4,Sigma70_r4_2
BYD3_k127_6191714_5	1434325.AZQN01000008_gene3015	1.995e-46	177.0	COG5343@1|root,COG5343@2|Bacteria,4NI2H@976|Bacteroidetes,47M55@768503|Cytophagia	976|Bacteroidetes	S	PFAM Anti-sigma-K factor RskA	-	-	-	-	-	-	-	-	-	-	-	-	RskA
BYD3_k127_6191714_0	1237149.C900_00497	1.789e-138	465.0	COG0457@1|root,COG0457@2|Bacteria,4NGGZ@976|Bacteroidetes	976|Bacteroidetes	S	tetratricopeptide repeat	-	-	-	-	-	-	-	-	-	-	-	-	TPR_1,TPR_11,TPR_16,TPR_8
BYD3_k127_6199398_6	925409.KI911562_gene2326	2.898e-53	195.0	COG0521@1|root,COG0521@2|Bacteria,4NFT1@976|Bacteroidetes,1IW8D@117747|Sphingobacteriia	976|Bacteroidetes	H	Starch-binding associating with outer membrane	-	-	-	-	-	-	-	-	-	-	-	-	SusD-like,SusD-like_2
BYD3_k127_6199398_4	1408433.JHXV01000002_gene442	7.686e-141	467.0	COG1520@1|root,COG1520@2|Bacteria,4NHPR@976|Bacteroidetes,1HXXS@117743|Flavobacteriia	976|Bacteroidetes	G	Arylsulfotransferase (ASST)	-	-	-	-	-	-	-	-	-	-	-	-	Arylsulfotrans
BYD3_k127_6199398_3	1189612.A33Q_0726	2.206e-153	492.0	COG0407@1|root,COG0407@2|Bacteria,4NEQ7@976|Bacteroidetes,47K90@768503|Cytophagia	976|Bacteroidetes	H	Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III	hemE	-	4.1.1.37	ko:K01599	ko00860,ko01100,ko01110,map00860,map01100,map01110	M00121	R03197,R04972	RC00872	ko00000,ko00001,ko00002,ko01000	-	-	-	URO-D
BYD3_k127_6199398_0	1239962.C943_00383	1.855e-282	889.0	COG0577@1|root,COG0577@2|Bacteria,4NDUK@976|Bacteroidetes	976|Bacteroidetes	V	permease	-	-	-	-	-	-	-	-	-	-	-	-	FtsX,MacB_PCD
BYD3_k127_6199398_2	1237149.C900_00475	1.195e-156	496.0	COG0777@1|root,COG0777@2|Bacteria,4NFMH@976|Bacteroidetes,47JX2@768503|Cytophagia	976|Bacteroidetes	I	Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA	accD	-	2.1.3.15,6.4.1.2	ko:K01963	ko00061,ko00620,ko00640,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00061,map00620,map00640,map00720,map01100,map01110,map01120,map01130,map01200,map01212	M00082,M00376	R00742,R04386	RC00040,RC00253,RC00367	ko00000,ko00001,ko00002,ko01000	-	-	-	Carboxyl_trans
BYD3_k127_6199398_1	1453500.AT05_00595	1.639e-184	582.0	COG1830@1|root,COG1830@2|Bacteria,4NEUM@976|Bacteroidetes,1HZ0Q@117743|Flavobacteriia	976|Bacteroidetes	G	PFAM DeoC LacD family aldolase	fbaB	-	4.1.2.13	ko:K11645	ko00010,ko00030,ko00051,ko00680,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00030,map00051,map00680,map00710,map01100,map01110,map01120,map01130,map01200,map01230	M00001,M00003	R01068,R01070,R01829,R02568	RC00438,RC00439,RC00603,RC00604	ko00000,ko00001,ko00002,ko01000	-	-	-	DeoC
BYD3_k127_6199398_7	1124780.ANNU01000052_gene3579	1.694e-51	185.0	COG0335@1|root,COG0335@2|Bacteria,4NNPW@976|Bacteroidetes,47QAS@768503|Cytophagia	976|Bacteroidetes	J	This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site	rplS	GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904	-	ko:K02884	ko03010,map03010	M00178	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_L19
BYD3_k127_6199398_5	1123008.KB905694_gene1666	3.537e-85	284.0	COG0336@1|root,COG0336@2|Bacteria,4NF2Q@976|Bacteroidetes,2FPQ5@200643|Bacteroidia,22WX6@171551|Porphyromonadaceae	976|Bacteroidetes	J	Belongs to the RNA methyltransferase TrmD family	trmD	GO:0001510,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008757,GO:0009019,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016423,GO:0016740,GO:0016741,GO:0016772,GO:0016779,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050518,GO:0070567,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360	2.1.1.228	ko:K00554	-	-	R00597	RC00003,RC00334	ko00000,ko01000,ko03016	-	-	-	tRNA_m1G_MT
BYD3_k127_6204012_10	1121930.AQXG01000008_gene137	1.913e-11	69.0	COG4232@1|root,COG4232@2|Bacteria,4NEW6@976|Bacteroidetes	976|Bacteroidetes	CO	Cytochrome c biogenesis protein transmembrane region	-	-	1.8.1.8	ko:K04084	-	-	-	-	ko00000,ko01000,ko03110	5.A.1.1	-	-	DsbC
BYD3_k127_6204012_4	1172179.AUKV01000001_gene1146	5.897e-86	290.0	COG2085@1|root,COG2085@2|Bacteria,2GMN3@201174|Actinobacteria	201174|Actinobacteria	S	NADP oxidoreductase coenzyme F420-dependent	-	-	1.5.1.40	ko:K06988	-	-	-	-	ko00000,ko01000	-	-	-	F420_oxidored
BYD3_k127_6204012_5	468059.AUHA01000005_gene2615	4.791e-50	181.0	COG1733@1|root,COG1733@2|Bacteria,4NPDU@976|Bacteroidetes	976|Bacteroidetes	K	HxlR-like helix-turn-helix	-	-	-	-	-	-	-	-	-	-	-	-	HxlR
BYD3_k127_6204012_3	700598.Niako_0932	7.599e-119	392.0	COG0329@1|root,COG0329@2|Bacteria,4NFCZ@976|Bacteroidetes,1IR3S@117747|Sphingobacteriia	976|Bacteroidetes	EM	Belongs to the DapA family	-	-	4.3.3.7	ko:K01714	ko00261,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00261,map00300,map01100,map01110,map01120,map01130,map01230	M00016,M00525,M00526,M00527	R10147	RC03062,RC03063	ko00000,ko00001,ko00002,ko01000	-	-	-	DHDPS
BYD3_k127_6204012_2	1122179.KB890419_gene54	6.253e-173	555.0	COG5368@1|root,COG5368@2|Bacteria,4NE34@976|Bacteroidetes	976|Bacteroidetes	S	protein conserved in bacteria	-	-	-	-	-	-	-	-	-	-	-	-	Glycoamylase
BYD3_k127_6204012_0	643867.Ftrac_1805	7.668e-293	933.0	COG1629@1|root,COG1629@2|Bacteria,4NDXS@976|Bacteroidetes,47KYY@768503|Cytophagia	976|Bacteroidetes	P	TonB-dependent receptor	-	-	-	-	-	-	-	-	-	-	-	-	CarbopepD_reg_2,Plug,TonB_dep_Rec
BYD3_k127_6204012_1	1279009.ADICEAN_01863	4.031e-173	556.0	COG0446@1|root,COG0446@2|Bacteria,4NDYU@976|Bacteroidetes,47KSA@768503|Cytophagia	976|Bacteroidetes	S	PFAM RagB SusD domain protein	-	-	-	ko:K21572	-	-	-	-	ko00000,ko02000	8.A.46.1,8.A.46.3	-	-	SusD-like_3,SusD_RagB
BYD3_k127_6204012_9	1279009.ADICEAN_01864	3.115e-12	70.0	COG2885@1|root,COG2885@2|Bacteria	2|Bacteria	M	chlorophyll binding	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_6204012_8	1239962.C943_02206	2.442e-20	101.0	COG5368@1|root,COG5368@2|Bacteria,4NE34@976|Bacteroidetes,47M1C@768503|Cytophagia	976|Bacteroidetes	S	protein conserved in bacteria	-	-	-	-	-	-	-	-	-	-	-	-	Big_5,DUF3131,Glycoamylase
BYD3_k127_6219906_4	743721.Psesu_2685	3.018e-09	58.0	COG0266@1|root,COG0266@2|Bacteria,1NR8T@1224|Proteobacteria,1SKSW@1236|Gammaproteobacteria,1X3P4@135614|Xanthomonadales	135614|Xanthomonadales	L	formamidopyrimidine-DNA glycosylase	-	-	4.2.99.18	ko:K05522	ko03410,map03410	-	-	-	ko00000,ko00001,ko01000,ko03400	-	-	-	Fapy_DNA_glyco,H2TH
BYD3_k127_6219906_2	714943.Mucpa_3002	5.323e-16	79.0	COG0266@1|root,COG0266@2|Bacteria,4NH8P@976|Bacteroidetes,1IR2V@117747|Sphingobacteriia	976|Bacteroidetes	L	DNA glycosylase AP lyase, H2TH DNA-binding	-	-	4.2.99.18	ko:K05522	ko03410,map03410	-	-	-	ko00000,ko00001,ko01000,ko03400	-	-	-	Fapy_DNA_glyco,H2TH
BYD3_k127_6219906_5	714943.Mucpa_3002	1.179e-07	53.0	COG0266@1|root,COG0266@2|Bacteria,4NH8P@976|Bacteroidetes,1IR2V@117747|Sphingobacteriia	976|Bacteroidetes	L	DNA glycosylase AP lyase, H2TH DNA-binding	-	-	4.2.99.18	ko:K05522	ko03410,map03410	-	-	-	ko00000,ko00001,ko01000,ko03400	-	-	-	Fapy_DNA_glyco,H2TH
BYD3_k127_6219906_3	1202532.FF52_19585	1.906e-10	64.0	COG0784@1|root,COG0784@2|Bacteria,4NTYN@976|Bacteroidetes,1I3P2@117743|Flavobacteriia,2NWFH@237|Flavobacterium	976|Bacteroidetes	T	cheY-homologous receiver domain	-	-	-	-	-	-	-	-	-	-	-	-	Response_reg
BYD3_k127_6219906_0	1121875.KB907547_gene2995	6.834e-77	265.0	COG2067@1|root,COG2067@2|Bacteria,4NX18@976|Bacteroidetes,1I5D9@117743|Flavobacteriia	976|Bacteroidetes	I	long-chain fatty acid transport protein	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_6219906_1	1123242.JH636434_gene3212	4.03e-39	150.0	COG3119@1|root,COG3119@2|Bacteria,2IX0Y@203682|Planctomycetes	203682|Planctomycetes	P	PFAM sulfatase	-	-	3.1.6.1	ko:K01130	ko00140,ko00600,map00140,map00600	-	R03980,R04856	RC00128,RC00231	ko00000,ko00001,ko01000	-	-	-	Sulfatase
BYD3_k127_6223931_7	1237149.C900_02234	1.242e-130	422.0	COG0472@1|root,COG0472@2|Bacteria,4NE0T@976|Bacteroidetes,47KEP@768503|Cytophagia	976|Bacteroidetes	M	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan	mraY	-	2.7.8.13	ko:K01000	ko00550,ko01100,ko01502,map00550,map01100,map01502	-	R05629,R05630	RC00002,RC02753	ko00000,ko00001,ko01000,ko01011	9.B.146	-	-	Glycos_transf_4,MraY_sig1
BYD3_k127_6223931_1	1237149.C900_02235	7.496e-215	677.0	COG0769@1|root,COG0769@2|Bacteria,4NE9W@976|Bacteroidetes,47JT3@768503|Cytophagia	976|Bacteroidetes	M	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan	murE	-	6.3.2.13	ko:K01928	ko00300,ko00550,map00300,map00550	-	R02788	RC00064,RC00090	ko00000,ko00001,ko01000,ko01011	-	-	-	Mur_ligase,Mur_ligase_C,Mur_ligase_M
BYD3_k127_6223931_0	1237149.C900_02236	4.727e-294	916.0	COG0768@1|root,COG0768@2|Bacteria,4NERV@976|Bacteroidetes,47K6U@768503|Cytophagia	976|Bacteroidetes	M	Cell division protein FtsI penicillin-binding protein 2	ftsI	-	3.4.16.4	ko:K03587	ko00550,ko01501,map00550,map01501	-	-	-	ko00000,ko00001,ko01000,ko01011,ko03036	-	-	-	PASTA,PBP_dimer,Transpeptidase
BYD3_k127_6223931_14	1237149.C900_02237	1.497e-31	127.0	2ADW0@1|root,313N0@2|Bacteria,4NSUW@976|Bacteroidetes,47R7E@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_6223931_8	1123277.KB893210_gene2873	7.264e-122	397.0	COG0275@1|root,COG0275@2|Bacteria,4NFQB@976|Bacteroidetes,47JJ6@768503|Cytophagia	976|Bacteroidetes	J	Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA	rsmH	GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016434,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0070475,GO:0071424,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360	2.1.1.199	ko:K03438	-	-	-	-	ko00000,ko01000,ko03009	-	-	-	Methyltransf_5
BYD3_k127_6223931_16	313598.MED152_04195	7.532e-19	89.0	2DNS7@1|root,32YWC@2|Bacteria,4NSJ6@976|Bacteroidetes,1IJQA@117743|Flavobacteriia	976|Bacteroidetes	S	23S rRNA-intervening sequence protein	-	-	-	-	-	-	-	-	-	-	-	-	23S_rRNA_IVP
BYD3_k127_6223931_11	1237149.C900_02239	1.1e-69	238.0	COG2001@1|root,COG2001@2|Bacteria,4NM4X@976|Bacteroidetes,47Q53@768503|Cytophagia	976|Bacteroidetes	K	Belongs to the MraZ family	mraZ	GO:0000976,GO:0001067,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0006355,GO:0008150,GO:0009889,GO:0009890,GO:0009892,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0019219,GO:0019222,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031333,GO:0043254,GO:0043565,GO:0044087,GO:0044212,GO:0045892,GO:0045934,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051128,GO:0051129,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:0140110,GO:1901363,GO:1902679,GO:1903506,GO:1903507,GO:1990837,GO:2000112,GO:2000113,GO:2000142,GO:2000143,GO:2001141	-	ko:K03925	-	-	-	-	ko00000	-	-	-	MraZ
BYD3_k127_6223931_6	1237149.C900_02241	1.885e-132	432.0	COG1804@1|root,COG1804@2|Bacteria,4NEA8@976|Bacteroidetes,47NJE@768503|Cytophagia	976|Bacteroidetes	C	CoA-transferase family III	-	-	-	-	-	-	-	-	-	-	-	-	CoA_transf_3
BYD3_k127_6223931_5	643867.Ftrac_2945	3.795e-138	451.0	COG0526@1|root,COG0526@2|Bacteria,4PMB3@976|Bacteroidetes,47JVX@768503|Cytophagia	976|Bacteroidetes	CO	Redoxin	-	-	-	-	-	-	-	-	-	-	-	-	AhpC-TSA,Redoxin
BYD3_k127_6223931_2	1237149.C900_02247	5.572e-186	588.0	COG0482@1|root,COG0482@2|Bacteria,4NFXZ@976|Bacteroidetes,47KX3@768503|Cytophagia	976|Bacteroidetes	J	Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34	mnmA	-	2.8.1.13	ko:K00566	ko04122,map04122	-	R08700	RC02313,RC02315	ko00000,ko00001,ko01000,ko03016	-	-	-	tRNA_Me_trans
BYD3_k127_6223931_15	1185876.BN8_01076	6.099e-26	114.0	COG3637@1|root,COG3637@2|Bacteria,4NV08@976|Bacteroidetes,47R7Z@768503|Cytophagia	976|Bacteroidetes	M	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety	-	-	-	-	-	-	-	-	-	-	-	-	OMP_b-brl
BYD3_k127_6223931_13	1124780.ANNU01000064_gene442	9.341e-51	186.0	COG2928@1|root,COG2928@2|Bacteria,4NR4F@976|Bacteroidetes,47QB1@768503|Cytophagia	976|Bacteroidetes	S	Protein of unknown function (DUF502)	-	-	-	-	-	-	-	-	-	-	-	-	DUF502
BYD3_k127_6223931_9	313606.M23134_08111	1.437e-88	296.0	COG2209@1|root,COG2209@2|Bacteria,4NEU0@976|Bacteroidetes,47KRI@768503|Cytophagia	976|Bacteroidetes	C	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol	nqrE	-	1.6.5.8	ko:K00350	-	-	-	-	ko00000,ko01000	-	-	-	Rnf-Nqr
BYD3_k127_6223931_10	1313301.AUGC01000008_gene499	5.638e-84	282.0	COG1347@1|root,COG1347@2|Bacteria,4NGD9@976|Bacteroidetes	976|Bacteroidetes	C	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol	nqrD	-	1.6.5.8	ko:K00349	-	-	-	-	ko00000,ko01000	-	-	-	Rnf-Nqr
BYD3_k127_6223931_12	641524.ADICYQ_5188	4.5e-56	204.0	COG2869@1|root,COG2869@2|Bacteria,4NF7A@976|Bacteroidetes,47KUU@768503|Cytophagia	976|Bacteroidetes	C	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol	nqrC	-	1.6.5.8	ko:K00348	-	-	-	-	ko00000,ko01000	-	-	-	FMN_bind
BYD3_k127_6223931_4	643867.Ftrac_1553	5.431e-174	553.0	COG4658@1|root,COG4658@2|Bacteria,4NFGW@976|Bacteroidetes,47ND4@768503|Cytophagia	976|Bacteroidetes	C	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol	nqrB	-	1.6.5.8	ko:K00347	-	-	-	-	ko00000,ko01000	-	-	-	NQR2_RnfD_RnfE
BYD3_k127_6223931_3	1237149.C900_02255	2.05e-184	583.0	COG1726@1|root,COG1726@2|Bacteria,4NEDQ@976|Bacteroidetes,47M23@768503|Cytophagia	976|Bacteroidetes	C	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol	nqrA	-	1.6.5.8	ko:K00346	-	-	-	-	ko00000,ko01000	-	-	-	NQRA,NQRA_SLBB
BYD3_k127_6229506_5	714943.Mucpa_3268	2.709e-62	222.0	COG0438@1|root,COG0438@2|Bacteria	2|Bacteria	M	transferase activity, transferring glycosyl groups	-	-	-	-	-	-	-	-	-	-	-	-	Glyco_trans_1_4,Glyco_transf_4,Glycos_transf_1
BYD3_k127_6229506_2	1237149.C900_03821	2.129e-74	265.0	COG0438@1|root,COG0438@2|Bacteria	2|Bacteria	M	transferase activity, transferring glycosyl groups	-	-	-	-	-	-	-	-	-	-	-	-	Glyco_trans_4_4,Glyco_transf_4,Glycos_transf_1,Glycos_transf_2
BYD3_k127_6229506_8	1500894.JQNN01000001_gene3734	2.888e-10	72.0	COG0438@1|root,COG0438@2|Bacteria,1MU9C@1224|Proteobacteria,2VHM2@28216|Betaproteobacteria,473I4@75682|Oxalobacteraceae	28216|Betaproteobacteria	M	Glycosyl transferases group 1	-	-	-	-	-	-	-	-	-	-	-	-	Glyco_trans_1_4,Glyco_trans_4_4,Glyco_transf_4,Glycos_transf_1
BYD3_k127_6229506_1	385682.AFSL01000049_gene505	5.68e-83	297.0	COG1132@1|root,COG1132@2|Bacteria,4NE2D@976|Bacteroidetes,2FMUK@200643|Bacteroidia,3XJSM@558415|Marinilabiliaceae	976|Bacteroidetes	V	ABC transporter transmembrane region	-	-	-	ko:K06147	-	-	-	-	ko00000,ko02000	3.A.1.106,3.A.1.109,3.A.1.21	-	-	ABC_membrane,ABC_tran
BYD3_k127_6229506_6	925775.XVE_3160	4.31e-51	190.0	COG0500@1|root,COG2226@2|Bacteria,1NNRW@1224|Proteobacteria,1T8Z5@1236|Gammaproteobacteria,1XBFC@135614|Xanthomonadales	135614|Xanthomonadales	Q	Nodulation protein S (NodS)	-	-	-	-	-	-	-	-	-	-	-	-	Methyltransf_25,Methyltransf_31
BYD3_k127_6229506_4	945713.IALB_2765	2.16e-63	227.0	COG0500@1|root,COG2226@2|Bacteria	2|Bacteria	Q	methyltransferase	-	-	2.1.1.163,2.1.1.201	ko:K03183	ko00130,ko01100,ko01110,map00130,map01100,map01110	M00116,M00117	R04990,R04993,R06859,R08774,R09736	RC00003,RC01253,RC01662	ko00000,ko00001,ko00002,ko01000	-	-	-	MetW,Methyltransf_11,Methyltransf_25,Methyltransf_31
BYD3_k127_6229506_3	1237149.C900_03020	3.191e-66	234.0	COG0500@1|root,COG2226@2|Bacteria,4NICK@976|Bacteroidetes	976|Bacteroidetes	Q	Methyltransferase domain	-	-	-	-	-	-	-	-	-	-	-	-	Methyltransf_25
BYD3_k127_6229506_7	945713.IALB_2766	5.028e-12	68.0	COG1032@1|root,COG1032@2|Bacteria	2|Bacteria	C	radical SAM domain protein	-	-	1.21.98.3	ko:K04034	ko00860,ko01100,ko01110,map00860,map01100,map01110	-	R06268,R06269,R06270	RC00741,RC01491,RC01492	ko00000,ko00001,ko01000	-	-	-	B12-binding,Radical_SAM
BYD3_k127_6229506_0	1237149.C900_03021	4.05e-137	441.0	COG1032@1|root,COG1032@2|Bacteria,4NETM@976|Bacteroidetes	976|Bacteroidetes	C	Fe-S oxidoreductase	-	-	-	-	-	-	-	-	-	-	-	-	B12-binding,Radical_SAM
BYD3_k127_6248907_1	929556.Solca_2394	1.234e-91	319.0	COG0457@1|root,COG2114@1|root,COG0457@2|Bacteria,COG2114@2|Bacteria,4NEVN@976|Bacteroidetes,1IS6A@117747|Sphingobacteriia	976|Bacteroidetes	T	PFAM Adenylate and Guanylate cyclase catalytic domain	-	-	-	-	-	-	-	-	-	-	-	-	Guanylate_cyc,Response_reg,TPR_12,TPR_8
BYD3_k127_6248907_0	1239962.C943_04032	7.133e-160	537.0	COG1404@1|root,COG4932@1|root,COG1404@2|Bacteria,COG4932@2|Bacteria,4NHSQ@976|Bacteroidetes,47KNM@768503|Cytophagia	976|Bacteroidetes	O	Subtilase family	-	-	-	-	-	-	-	-	-	-	-	-	Peptidase_S8
BYD3_k127_6252880_0	1237149.C900_03868	0.0	1090.0	COG0542@1|root,COG0542@2|Bacteria,4NE1J@976|Bacteroidetes,47JFM@768503|Cytophagia	976|Bacteroidetes	O	Belongs to the ClpA ClpB family	clpC	-	-	ko:K03696	ko01100,map01100	-	-	-	ko00000,ko03110	-	-	-	AAA,AAA_2,ClpB_D2-small,Clp_N,UVR
BYD3_k127_6252880_1	1121875.KB907547_gene2933	1.059e-127	413.0	COG3401@1|root,COG3401@2|Bacteria,4NKNR@976|Bacteroidetes,1I02K@117743|Flavobacteriia	976|Bacteroidetes	S	FG-GAP repeat protein	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_6252880_2	1237149.C900_03865	1.051e-86	297.0	COG2304@1|root,COG2304@2|Bacteria,4NER3@976|Bacteroidetes,47JA7@768503|Cytophagia	976|Bacteroidetes	S	oxidoreductase activity	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_6269630_2	1237149.C900_05249	1.737e-80	274.0	COG2885@1|root,COG2885@2|Bacteria,4NEGF@976|Bacteroidetes,47PK1@768503|Cytophagia	976|Bacteroidetes	M	Belongs to the ompA family	-	-	-	-	-	-	-	-	-	-	-	-	Gly-zipper_Omp,OmpA,PD40
BYD3_k127_6269630_0	485917.Phep_4211	3.67e-121	401.0	COG0665@1|root,COG0665@2|Bacteria,4NFT6@976|Bacteroidetes,1IR0J@117747|Sphingobacteriia	976|Bacteroidetes	E	FAD dependent oxidoreductase	-	-	-	-	-	-	-	-	-	-	-	-	DAO
BYD3_k127_6269630_5	926562.Oweho_1115	7.42e-24	106.0	COG3871@1|root,COG3871@2|Bacteria,4NNGC@976|Bacteroidetes,1I1XY@117743|Flavobacteriia	976|Bacteroidetes	S	general stress protein	-	-	-	-	-	-	-	-	-	-	-	-	Pyrid_ox_like
BYD3_k127_6269630_4	1492738.FEM21_13540	2.641e-44	168.0	COG3685@1|root,COG3685@2|Bacteria,4NMCT@976|Bacteroidetes,1I1BM@117743|Flavobacteriia,2NUHM@237|Flavobacterium	976|Bacteroidetes	S	Domain of unknown function (DUF892)	-	-	-	-	-	-	-	-	-	-	-	-	DUF892
BYD3_k127_6269630_6	1122605.KB893643_gene597	1.505e-23	105.0	2DJ8B@1|root,32UCJ@2|Bacteria,4NTR0@976|Bacteroidetes	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_6269630_3	929556.Solca_4051	1.744e-54	196.0	COG5478@1|root,COG5478@2|Bacteria,4NQU8@976|Bacteroidetes,1J0FM@117747|Sphingobacteriia	976|Bacteroidetes	S	PFAM Low affinity iron permease	-	-	-	-	-	-	-	-	-	-	-	-	Iron_permease
BYD3_k127_6269630_1	1124780.ANNU01000008_gene2646	1.685e-89	301.0	COG0767@1|root,COG0767@2|Bacteria,4NF7X@976|Bacteroidetes,47K33@768503|Cytophagia	976|Bacteroidetes	Q	ABC-type transport system involved in resistance to organic solvents permease component	-	-	-	ko:K02066	ko02010,map02010	M00210,M00669,M00670	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.27	-	-	MlaE
BYD3_k127_6283621_3	1237149.C900_04340	1.796e-88	301.0	COG1266@1|root,COG1266@2|Bacteria,4NJAV@976|Bacteroidetes,47M12@768503|Cytophagia	976|Bacteroidetes	S	CAAX protease self-immunity	-	-	-	-	-	-	-	-	-	-	-	-	Abi
BYD3_k127_6283621_5	1237149.C900_04341	1.293e-63	223.0	COG0424@1|root,COG0424@2|Bacteria,4NNXV@976|Bacteroidetes,47JTY@768503|Cytophagia	976|Bacteroidetes	D	Maf-like protein	maf	-	-	ko:K06287	-	-	-	-	ko00000	-	-	-	Maf
BYD3_k127_6283621_2	1237149.C900_00260	3.307e-109	377.0	28M1N@1|root,2ZAGE@2|Bacteria,4NIDD@976|Bacteroidetes,47JC7@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_6283621_4	1237149.C900_00261	2.699e-87	296.0	COG2815@1|root,COG2815@2|Bacteria,4NSUI@976|Bacteroidetes,47KQI@768503|Cytophagia	976|Bacteroidetes	S	PFAM PASTA domain	spk1	-	2.7.11.1,6.3.2.4	ko:K01921,ko:K08884,ko:K12132	ko00473,ko00550,ko01100,ko01502,map00473,map00550,map01100,map01502	-	R01150	RC00064,RC00141	ko00000,ko00001,ko01000,ko01001,ko01011	-	-	-	PASTA
BYD3_k127_6283621_1	1237149.C900_00262	7.556e-125	409.0	COG1181@1|root,COG1181@2|Bacteria,4NE9P@976|Bacteroidetes,47M8U@768503|Cytophagia	976|Bacteroidetes	F	Belongs to the D-alanine--D-alanine ligase family	ddl	-	6.3.2.4	ko:K01921	ko00473,ko00550,ko01100,ko01502,map00473,map00550,map01100,map01502	-	R01150	RC00064,RC00141	ko00000,ko00001,ko01000,ko01011	-	-	-	Dala_Dala_lig_C,Dala_Dala_lig_N
BYD3_k127_6283621_0	1237149.C900_00263	6.955e-234	757.0	COG1404@1|root,COG3291@1|root,COG1404@2|Bacteria,COG3291@2|Bacteria,4NGRJ@976|Bacteroidetes,47JD6@768503|Cytophagia	976|Bacteroidetes	O	PFAM Pregnancy-associated plasma protein-A	fpp2	-	-	-	-	-	-	-	-	-	-	-	Peptidase_M43
BYD3_k127_6283621_8	1122134.KB893651_gene1920	1.324e-05	51.0	COG3832@1|root,COG3832@2|Bacteria,1RDMX@1224|Proteobacteria,1S914@1236|Gammaproteobacteria	1236|Gammaproteobacteria	KT	Polyketide cyclase / dehydrase and lipid transport	-	-	-	-	-	-	-	-	-	-	-	-	GyrI-like,Polyketide_cyc2
BYD3_k127_6283621_7	1122604.JONR01000025_gene4579	2.433e-12	77.0	29XWU@1|root,30JP9@2|Bacteria	2|Bacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_6283621_6	1121904.ARBP01000001_gene5586	2.093e-18	86.0	COG0577@1|root,COG0577@2|Bacteria,4NKYD@976|Bacteroidetes,47MU6@768503|Cytophagia	976|Bacteroidetes	V	MacB-like periplasmic core domain	-	-	-	-	-	-	-	-	-	-	-	-	FtsX,MacB_PCD
BYD3_k127_6285790_1	1121012.AUKX01000070_gene1855	4.25e-104	349.0	COG0642@1|root,COG2205@2|Bacteria,4NFYN@976|Bacteroidetes,1HZ6X@117743|Flavobacteriia,23I0R@178469|Arenibacter	976|Bacteroidetes	T	Domain of unknown function (DUF4118)	-	-	2.7.13.3	ko:K07646	ko02020,map02020	M00454	-	-	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	-	-	-	DUF4118,HATPase_c,HisKA
BYD3_k127_6285790_4	1123248.KB893315_gene2975	1.111e-14	79.0	28JUV@1|root,30VEM@2|Bacteria,4NY80@976|Bacteroidetes	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_6285790_3	1239962.C943_00988	7.311e-30	121.0	COG2704@1|root,COG2704@2|Bacteria,4NGDF@976|Bacteroidetes,47T5H@768503|Cytophagia	976|Bacteroidetes	S	Anaerobic c4-dicarboxylate membrane transporter	-	-	-	ko:K07791,ko:K07792	ko02020,map02020	-	-	-	ko00000,ko00001,ko02000	2.A.13.1	-	-	DcuA_DcuB
BYD3_k127_6285790_0	1239962.C943_00987	7.104e-200	625.0	COG0252@1|root,COG0252@2|Bacteria,4NFKG@976|Bacteroidetes,47MY9@768503|Cytophagia	976|Bacteroidetes	EJ	Asparaginase	ansB	-	3.5.1.1	ko:K01424	ko00250,ko00460,ko01100,ko01110,map00250,map00460,map01100,map01110	-	R00485	RC00010,RC02798	ko00000,ko00001,ko01000	-	-	-	Asparaginase
BYD3_k127_6285790_2	1341181.FLJC2902T_15860	2.597e-39	149.0	COG1027@1|root,COG1027@2|Bacteria,4P1PR@976|Bacteroidetes,1HZDD@117743|Flavobacteriia,2NU65@237|Flavobacterium	976|Bacteroidetes	E	Fumarase C C-terminus	-	-	4.3.1.1	ko:K01744	ko00250,ko01100,map00250,map01100	-	R00490	RC00316,RC02799	ko00000,ko00001,ko01000	-	-	-	FumaraseC_C,Lyase_1
BYD3_k127_6298020_2	391603.FBALC1_09522	1.799e-20	94.0	COG3279@1|root,COG3279@2|Bacteria,4NFPV@976|Bacteroidetes,1I0QN@117743|Flavobacteriia	976|Bacteroidetes	T	LytTr DNA-binding domain	-	-	-	ko:K02477	-	-	-	-	ko00000,ko02022	-	-	-	LytTR,Response_reg
BYD3_k127_6298020_1	1121904.ARBP01000011_gene1543	6.333e-66	243.0	COG1073@1|root,COG1073@2|Bacteria,4P9E8@976|Bacteroidetes,47R3G@768503|Cytophagia	976|Bacteroidetes	O	Domain present in PSD-95, Dlg, and ZO-1/2.	-	-	-	-	-	-	-	-	-	-	-	-	Hydrolase_4,PDZ_2
BYD3_k127_6298020_0	1121904.ARBP01000011_gene1544	1.34e-69	243.0	COG3279@1|root,COG3279@2|Bacteria	2|Bacteria	KT	phosphorelay signal transduction system	-	-	-	-	-	-	-	-	-	-	-	-	LytTR,TPR_8
BYD3_k127_6298657_2	1237149.C900_02651	3.537e-60	218.0	COG0457@1|root,COG0823@1|root,COG2885@1|root,COG0457@2|Bacteria,COG0823@2|Bacteria,COG2885@2|Bacteria,4NHCE@976|Bacteroidetes,47X9U@768503|Cytophagia	976|Bacteroidetes	MU	OmpA family	-	-	-	-	-	-	-	-	-	-	-	-	OmpA,PD40,TPR_11,TPR_16
BYD3_k127_6298657_0	1237149.C900_05254	2.935e-318	995.0	COG3127@1|root,COG3127@2|Bacteria,4NF16@976|Bacteroidetes,47MB7@768503|Cytophagia	976|Bacteroidetes	Q	FtsX-like permease family	-	-	-	ko:K02004	-	M00258	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	FtsX,MacB_PCD
BYD3_k127_6298657_1	1237149.C900_05253	1.293e-99	329.0	COG4181@1|root,COG4181@2|Bacteria,4NEVZ@976|Bacteroidetes,47JSN@768503|Cytophagia	976|Bacteroidetes	Q	ABC transporter	-	-	-	ko:K02003	-	M00258	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	ABC_tran
BYD3_k127_6298657_3	1237149.C900_05252	3.431e-24	104.0	COG2755@1|root,COG2755@2|Bacteria,4NE58@976|Bacteroidetes,47P77@768503|Cytophagia	976|Bacteroidetes	E	GDSL-like Lipase/Acylhydrolase family	tesA	-	3.1.1.5	ko:K10804	ko01040,map01040	-	-	-	ko00000,ko00001,ko01000,ko01004	-	-	-	Lipase_GDSL_2
BYD3_k127_6299670_3	509635.N824_07005	2.005e-122	397.0	2BZ6M@1|root,2Z7HW@2|Bacteria,4NDZE@976|Bacteroidetes,1INP8@117747|Sphingobacteriia	976|Bacteroidetes	S	Domain of Unknown Function (DUF1080)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1080
BYD3_k127_6299670_4	926549.KI421517_gene4105	5.229e-107	357.0	COG2133@1|root,COG2133@2|Bacteria,4NGMS@976|Bacteroidetes,47KFU@768503|Cytophagia	976|Bacteroidetes	G	Domain of Unknown Function (DUF1080)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1080
BYD3_k127_6299670_8	926549.KI421517_gene3712	6.345e-16	89.0	COG2730@1|root,COG2730@2|Bacteria,4NXWZ@976|Bacteroidetes,47WUS@768503|Cytophagia	976|Bacteroidetes	G	Belongs to the glycosyl hydrolase 5 (cellulase A) family	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_6299670_7	641524.ADICYQ_0157	5.49e-41	165.0	COG2114@1|root,COG2114@2|Bacteria,4NKWT@976|Bacteroidetes,47XVT@768503|Cytophagia	976|Bacteroidetes	T	Protein of unknown function (DUF2652)	-	-	-	-	-	-	-	-	-	-	-	-	DUF2652
BYD3_k127_6299670_0	1121904.ARBP01000002_gene7252	3.389e-241	771.0	COG0577@1|root,COG0577@2|Bacteria,4NDUK@976|Bacteroidetes,47JJN@768503|Cytophagia	976|Bacteroidetes	V	FtsX-like permease family	-	-	-	ko:K02004	-	M00258	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	FtsX,MacB_PCD
BYD3_k127_6299670_5	1121481.AUAS01000018_gene454	1.68e-72	256.0	COG0657@1|root,COG0657@2|Bacteria,4NHDX@976|Bacteroidetes,47KJB@768503|Cytophagia	976|Bacteroidetes	I	Carboxylesterase family	-	-	-	-	-	-	-	-	-	-	-	-	Abhydrolase_3,COesterase
BYD3_k127_6299670_2	1270196.JCKI01000008_gene1663	5.741e-129	419.0	COG1294@1|root,COG1294@2|Bacteria,4NH9P@976|Bacteroidetes,1IRPP@117747|Sphingobacteriia	976|Bacteroidetes	C	COGs COG1294 Cytochrome bd-type quinol oxidase subunit 2	cydB	-	1.10.3.14	ko:K00426	ko00190,ko01100,ko02020,map00190,map01100,map02020	M00153	R11325	RC00061	ko00000,ko00001,ko00002,ko01000	3.D.4.3	-	-	Cyt_bd_oxida_II
BYD3_k127_6299670_1	1150600.ADIARSV_1358	1.794e-220	692.0	COG1271@1|root,COG1271@2|Bacteria,4NG7U@976|Bacteroidetes,1INY9@117747|Sphingobacteriia	976|Bacteroidetes	C	Cytochrome bd ubiquinol oxidase subunit I	cydA	-	1.10.3.14	ko:K00425	ko00190,ko01100,ko02020,map00190,map01100,map02020	M00153	R11325	RC00061	ko00000,ko00001,ko00002,ko01000	3.D.4.3	-	-	Cyt_bd_oxida_I
BYD3_k127_6299670_6	204669.Acid345_4693	3.845e-58	213.0	COG1574@1|root,COG1574@2|Bacteria,3Y2UF@57723|Acidobacteria,2JIRH@204432|Acidobacteriia	57723|Acidobacteria	S	Amidohydrolase family	-	-	-	-	-	-	-	-	-	-	-	-	Amidohydro_3
BYD3_k127_6301235_2	1237149.C900_04716	5.012e-101	334.0	COG1024@1|root,COG1024@2|Bacteria,4NFEM@976|Bacteroidetes,47JUC@768503|Cytophagia	976|Bacteroidetes	I	Belongs to the enoyl-CoA hydratase isomerase family	crt	-	4.2.1.17	ko:K01715	ko00650,ko01200,map00650,map01200	-	R03026	RC00831	ko00000,ko00001,ko01000	-	-	-	ECH_1
BYD3_k127_6301235_1	1121373.KB903620_gene2027	5.368e-122	404.0	COG2244@1|root,COG2244@2|Bacteria,4NDZ0@976|Bacteroidetes,47MQE@768503|Cytophagia	976|Bacteroidetes	S	Polysaccharide biosynthesis protein	cap	-	-	-	-	-	-	-	-	-	-	-	Polysacc_synt,Polysacc_synt_3,Polysacc_synt_C
BYD3_k127_6301235_4	926549.KI421517_gene1850	1.483e-06	52.0	COG2244@1|root,COG2244@2|Bacteria,4NDZ0@976|Bacteroidetes,47MQE@768503|Cytophagia	976|Bacteroidetes	S	Polysaccharide biosynthesis protein	cap	-	-	-	-	-	-	-	-	-	-	-	Polysacc_synt,Polysacc_synt_3,Polysacc_synt_C
BYD3_k127_6301235_0	1124780.ANNU01000028_gene994	4.642e-144	463.0	COG1208@1|root,COG1208@2|Bacteria,4NE97@976|Bacteroidetes,47ND5@768503|Cytophagia	976|Bacteroidetes	JM	Nucleotidyl transferase	rffH	-	2.7.7.24	ko:K00973	ko00521,ko00523,ko00525,ko01130,map00521,map00523,map00525,map01130	M00793	R02328	RC00002	ko00000,ko00001,ko00002,ko01000	-	-	-	Hexapep,NTP_transferase
BYD3_k127_6301235_3	1237149.C900_04713	6.554e-72	255.0	COG0457@1|root,COG0457@2|Bacteria,4NDVW@976|Bacteroidetes,47KE1@768503|Cytophagia	976|Bacteroidetes	S	PFAM Tetratricopeptide	-	-	-	-	-	-	-	-	-	-	-	-	TPR_16,TPR_19,TPR_2,TPR_6,TPR_8
BYD3_k127_632311_2	1237149.C900_05421	6.129e-38	148.0	COG1011@1|root,COG1011@2|Bacteria,4NM66@976|Bacteroidetes,47Q1Q@768503|Cytophagia	976|Bacteroidetes	S	haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E	yjjG	-	-	ko:K07025	-	-	-	-	ko00000	-	-	-	HAD_2
BYD3_k127_632311_1	1237149.C900_05422	8.53e-52	185.0	COG0640@1|root,COG0640@2|Bacteria,4NRN0@976|Bacteroidetes,47QVI@768503|Cytophagia	976|Bacteroidetes	K	arsR family	arsR	-	-	ko:K03892	-	-	-	-	ko00000,ko03000	-	-	-	HTH_20,HTH_5
BYD3_k127_632311_0	1237149.C900_05423	2.36e-70	244.0	2BBSK@1|root,325AS@2|Bacteria,4NR2Q@976|Bacteroidetes,47JP3@768503|Cytophagia	976|Bacteroidetes	S	CarboxypepD_reg-like domain	-	-	-	-	-	-	-	-	-	-	-	-	CarbopepD_reg_2
BYD3_k127_632311_3	984262.SGRA_2447	1.993e-36	158.0	2B31B@1|root,31VNR@2|Bacteria,4NS4U@976|Bacteroidetes,1ITM6@117747|Sphingobacteriia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_632311_4	1317122.ATO12_17185	2.909e-09	70.0	2BM5Y@1|root,32FPJ@2|Bacteria,4PBHW@976|Bacteroidetes,1ICGD@117743|Flavobacteriia,2YM0X@290174|Aquimarina	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_6327042_0	620914.JH621257_gene1297	4.606e-115	381.0	COG2730@1|root,COG2730@2|Bacteria,4NJFV@976|Bacteroidetes,1IBWH@117743|Flavobacteriia	976|Bacteroidetes	G	Cellulase (glycosyl hydrolase family 5)	celC	-	3.2.1.4	ko:K01179	ko00500,ko01100,map00500,map01100	-	R06200,R11307,R11308	-	ko00000,ko00001,ko01000	-	GH5,GH9	-	Cellulase
BYD3_k127_6327042_1	1237149.C900_00528	2.671e-88	297.0	COG0664@1|root,COG0664@2|Bacteria,4NKW5@976|Bacteroidetes,47N83@768503|Cytophagia	976|Bacteroidetes	K	Crp-like helix-turn-helix domain	-	-	-	ko:K10914	ko02020,ko02024,ko02025,ko02026,ko05111,map02020,map02024,map02025,map02026,map05111	-	-	-	ko00000,ko00001,ko03000	-	-	-	HTH_Crp_2,cNMP_binding
BYD3_k127_6327042_2	929703.KE386491_gene3799	3.188e-80	275.0	COG3217@1|root,COG3217@2|Bacteria,4NG33@976|Bacteroidetes,47PMH@768503|Cytophagia	976|Bacteroidetes	S	beta barrel domain	-	-	-	ko:K07140	-	-	-	-	ko00000	-	-	-	MOSC,MOSC_N
BYD3_k127_6327042_3	1237149.C900_00530	5.848e-40	151.0	COG1981@1|root,COG1981@2|Bacteria,4NEWG@976|Bacteroidetes,47PXS@768503|Cytophagia	976|Bacteroidetes	S	PFAM Uncharacterised protein family (UPF0093)	-	-	-	ko:K08973	-	-	-	-	ko00000	-	-	-	UPF0093
BYD3_k127_6327042_4	1166018.FAES_4765	9.374e-13	68.0	COG1981@1|root,COG1981@2|Bacteria,4NEWG@976|Bacteroidetes,47PXS@768503|Cytophagia	976|Bacteroidetes	S	PFAM Uncharacterised protein family (UPF0093)	-	-	-	ko:K08973	-	-	-	-	ko00000	-	-	-	UPF0093
BYD3_k127_6337879_0	926549.KI421517_gene2399	9.019e-308	957.0	COG4993@1|root,COG4993@2|Bacteria,4NFK0@976|Bacteroidetes,47KDI@768503|Cytophagia	976|Bacteroidetes	G	Pyrrolo-quinoline quinone	-	-	1.1.5.2	ko:K00117	ko00030,ko01100,ko01110,ko01130,map00030,map01100,map01110,map01130	-	R06620	RC00066	ko00000,ko00001,ko01000	-	-	-	Cytochrome_CBB3,PQQ,PQQ_2
BYD3_k127_6337879_7	5039.XP_002629011.1	0.0003798	44.0	KOG2301@1|root,KOG2301@2759|Eukaryota,38BYK@33154|Opisthokonta,3NUK8@4751|Fungi,3QMP9@4890|Ascomycota,20B8V@147545|Eurotiomycetes,3B0KD@33183|Onygenales	4751|Fungi	P	Calcium channel subunit Cch1	CCH1	GO:0001508,GO:0003674,GO:0005215,GO:0005216,GO:0005244,GO:0005245,GO:0005261,GO:0005262,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006812,GO:0006816,GO:0006873,GO:0006874,GO:0006875,GO:0007154,GO:0007165,GO:0007204,GO:0008150,GO:0008324,GO:0009987,GO:0015075,GO:0015085,GO:0015267,GO:0015318,GO:0016020,GO:0016021,GO:0019722,GO:0019725,GO:0019932,GO:0022803,GO:0022832,GO:0022836,GO:0022838,GO:0022839,GO:0022843,GO:0022857,GO:0022890,GO:0023052,GO:0030001,GO:0030003,GO:0031224,GO:0031226,GO:0034220,GO:0035556,GO:0035585,GO:0042391,GO:0042592,GO:0044425,GO:0044459,GO:0044464,GO:0046873,GO:0048878,GO:0050789,GO:0050794,GO:0050801,GO:0050896,GO:0051179,GO:0051234,GO:0051480,GO:0051641,GO:0051649,GO:0051716,GO:0051899,GO:0055065,GO:0055074,GO:0055080,GO:0055082,GO:0055085,GO:0060401,GO:0060402,GO:0065007,GO:0065008,GO:0070509,GO:0070588,GO:0070838,GO:0071944,GO:0072503,GO:0072507,GO:0072511,GO:0086010,GO:0097553,GO:0098655,GO:0098657,GO:0098659,GO:0098660,GO:0098662,GO:0098703,GO:0098739,GO:0098771,GO:0099587,GO:1902656	-	ko:K21864	-	-	-	-	ko00000,ko02000	1.A.1.11.10,1.A.1.11.23	-	-	Ion_trans
BYD3_k127_6337879_1	313603.FB2170_14288	2.11e-171	553.0	COG3419@1|root,COG3419@2|Bacteria,4NGV9@976|Bacteroidetes	976|Bacteroidetes	NU	Tfp pilus assembly protein tip-associated adhesin	-	-	-	-	-	-	-	-	-	-	-	-	PQQ,PQQ_2
BYD3_k127_6337879_6	1121481.AUAS01000004_gene1409	2.491e-146	472.0	COG0673@1|root,COG0673@2|Bacteria,4NE75@976|Bacteroidetes,47K0H@768503|Cytophagia	976|Bacteroidetes	S	Oxidoreductase family, NAD-binding Rossmann fold	gfo	-	1.1.99.28	ko:K00118	-	-	-	-	ko00000,ko01000	-	-	-	GFO_IDH_MocA,GFO_IDH_MocA_C
BYD3_k127_6337879_2	1121875.KB907549_gene2017	4.605e-171	548.0	COG1914@1|root,COG1914@2|Bacteria	2|Bacteria	P	metal ion transmembrane transporter activity	-	-	-	-	-	-	-	-	-	-	-	-	Nramp
BYD3_k127_6337879_4	1121481.AUAS01000004_gene1309	6.273e-150	483.0	28HNS@1|root,2Z7WY@2|Bacteria,4NDYC@976|Bacteroidetes,47MGX@768503|Cytophagia	976|Bacteroidetes	S	Domain of unknown function (DUF4856)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4856
BYD3_k127_6337879_5	929703.KE386491_gene3610	5.464e-147	474.0	COG3489@1|root,COG3489@2|Bacteria,4NFAT@976|Bacteroidetes,47NBA@768503|Cytophagia	976|Bacteroidetes	S	Imelysin	-	-	-	-	-	-	-	-	-	-	-	-	Peptidase_M75
BYD3_k127_6337879_3	504472.Slin_4531	3.155e-162	517.0	COG3250@1|root,COG3250@2|Bacteria,4NE9C@976|Bacteroidetes,47KZT@768503|Cytophagia	976|Bacteroidetes	G	Horizontally Transferred TransMembrane Domain	-	-	-	-	-	-	-	-	-	-	-	-	VKG_Carbox
BYD3_k127_634908_4	1237149.C900_04752	4.823e-65	232.0	COG0457@1|root,COG0457@2|Bacteria,4NG8A@976|Bacteroidetes,47JRE@768503|Cytophagia	976|Bacteroidetes	S	TPR repeat-containing protein	-	-	-	-	-	-	-	-	-	-	-	-	TPR_12,TPR_7,TPR_8
BYD3_k127_634908_3	1237149.C900_04753	1.579e-82	279.0	COG0406@1|root,COG0406@2|Bacteria,4NFX5@976|Bacteroidetes,47JSV@768503|Cytophagia	976|Bacteroidetes	G	phosphoglycerate mutase family	gpm	-	-	-	-	-	-	-	-	-	-	-	His_Phos_1
BYD3_k127_634908_5	1124780.ANNU01000019_gene1773	5.099e-55	196.0	COG2050@1|root,COG2050@2|Bacteria,4NNYG@976|Bacteroidetes,47QEZ@768503|Cytophagia	976|Bacteroidetes	Q	PFAM thioesterase superfamily	ydiI	-	3.1.2.28	ko:K19222	ko00130,ko01100,ko01110,map00130,map01100,map01110	M00116	R07262	RC00004,RC00174	ko00000,ko00001,ko00002,ko01000	-	-	-	4HBT,Hydrolase_3
BYD3_k127_634908_2	1237149.C900_04755	6.395e-111	371.0	COG1169@1|root,COG1169@2|Bacteria,4NF6U@976|Bacteroidetes,47K5Z@768503|Cytophagia	976|Bacteroidetes	HQ	PFAM chorismate binding enzyme	entC	-	5.4.4.2	ko:K02361,ko:K02552	ko00130,ko01053,ko01100,ko01110,ko01130,map00130,map01053,map01100,map01110,map01130	M00116	R01717	RC00588	ko00000,ko00001,ko00002,ko01000	-	-	-	Chorismate_bind
BYD3_k127_634908_0	1124780.ANNU01000019_gene1770	1.284e-166	541.0	COG1165@1|root,COG1165@2|Bacteria,4NETZ@976|Bacteroidetes,47JS5@768503|Cytophagia	976|Bacteroidetes	H	Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate (SEPHCHC)	menD	-	2.2.1.9	ko:K02551	ko00130,ko01100,ko01110,map00130,map01100,map01110	M00116	R08165	RC02186	ko00000,ko00001,ko00002,ko01000	-	-	-	TPP_enzyme_C,TPP_enzyme_M_2,TPP_enzyme_N
BYD3_k127_634908_1	929703.KE386491_gene1400	4.967e-148	471.0	COG0447@1|root,COG0447@2|Bacteria,4NDXT@976|Bacteroidetes,47JYS@768503|Cytophagia	976|Bacteroidetes	H	Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)	menB	-	4.1.3.36	ko:K01661	ko00130,ko01100,ko01110,map00130,map01100,map01110	M00116	R07263	RC01923	ko00000,ko00001,ko00002,ko01000	-	-	-	ECH_1
BYD3_k127_634908_6	468059.AUHA01000002_gene240	1.248e-38	148.0	COG1661@1|root,COG1661@2|Bacteria,4NPS1@976|Bacteroidetes	976|Bacteroidetes	S	Domain of unknown function (DUF296)	-	-	-	ko:K06934	-	-	-	-	ko00000	-	-	-	DUF296
BYD3_k127_634908_8	926550.CLDAP_27520	2.744e-09	61.0	COG0318@1|root,COG0318@2|Bacteria	2|Bacteria	IQ	PFAM AMP-dependent synthetase and ligase	menE	-	6.2.1.26	ko:K01911	ko00130,ko01100,ko01110,map00130,map01100,map01110	M00116	R04030	RC00004,RC00014	ko00000,ko00001,ko00002,ko01000	-	-	-	AMP-binding,AMP-binding_C
BYD3_k127_6362914_1	1123278.KB893564_gene2580	2.901e-136	440.0	COG0477@1|root,COG2814@2|Bacteria,4NEZT@976|Bacteroidetes,47M0X@768503|Cytophagia	976|Bacteroidetes	EGP	PFAM Major Facilitator Superfamily	-	-	-	-	-	-	-	-	-	-	-	-	MFS_1
BYD3_k127_6362914_6	509635.N824_12150	6.756e-76	259.0	COG2346@1|root,COG2346@2|Bacteria,4NPJ3@976|Bacteroidetes,1ISNH@117747|Sphingobacteriia	976|Bacteroidetes	S	Bacterial-like globin	-	-	-	ko:K06886	-	-	-	-	ko00000	-	-	-	Bac_globin
BYD3_k127_6362914_11	1218084.BBJK01000002_gene103	2.793e-14	78.0	COG3631@1|root,COG3631@2|Bacteria,1N028@1224|Proteobacteria,2W9MI@28216|Betaproteobacteria,1K9XF@119060|Burkholderiaceae	28216|Betaproteobacteria	S	SnoaL-like domain	-	-	-	-	-	-	-	-	-	-	-	-	SnoaL_2
BYD3_k127_6362914_13	1492738.FEM21_17880	2.301e-05	49.0	2A2A0@1|root,30QKT@2|Bacteria,4PCUD@976|Bacteroidetes,1IDCC@117743|Flavobacteriia,2NY0A@237|Flavobacterium	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_6362914_2	1048983.EL17_22865	7.203e-132	431.0	COG3746@1|root,COG3746@2|Bacteria,4NH24@976|Bacteroidetes,47K0B@768503|Cytophagia	976|Bacteroidetes	P	Phosphate-selective porin O and P	-	-	-	-	-	-	-	-	-	-	-	-	Porin_O_P
BYD3_k127_6362914_3	1121904.ARBP01000013_gene414	5.347e-126	412.0	COG2201@1|root,COG2201@2|Bacteria,4NJF9@976|Bacteroidetes,47NTP@768503|Cytophagia	976|Bacteroidetes	NT	PFAM CheB methylesterase	cheB	-	3.1.1.61,3.5.1.44	ko:K03412	ko02020,ko02030,map02020,map02030	M00506	-	-	ko00000,ko00001,ko00002,ko01000,ko02022,ko02035	-	-	-	CheB_methylest
BYD3_k127_6362914_5	1121904.ARBP01000013_gene415	2.584e-88	300.0	COG1352@1|root,COG1352@2|Bacteria,4NJ75@976|Bacteroidetes,47RGQ@768503|Cytophagia	976|Bacteroidetes	NT	Methyltransferase, chemotaxis proteins	-	-	2.1.1.80	ko:K00575	ko02020,ko02030,map02020,map02030	-	-	-	ko00000,ko00001,ko01000,ko02035	-	-	-	CheR,CheR_N
BYD3_k127_6362914_4	398767.Glov_1738	3.159e-122	416.0	COG0643@1|root,COG0643@2|Bacteria,1MUAG@1224|Proteobacteria,42M6Q@68525|delta/epsilon subdivisions,2WJ5U@28221|Deltaproteobacteria,43UFD@69541|Desulfuromonadales	28221|Deltaproteobacteria	NT	Signal transducing histidine kinase, homodimeric domain	cheA34H	-	2.7.13.3	ko:K03407	ko02020,ko02030,map02020,map02030	M00506	-	-	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022,ko02035	-	-	-	CheW,H-kinase_dim,HATPase_c,Hpt
BYD3_k127_6362914_8	1121904.ARBP01000013_gene418	1.105e-46	170.0	COG0745@1|root,COG0745@2|Bacteria	1121904.ARBP01000013_gene418|-	T	phosphorelay signal transduction system	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_6362914_7	1121904.ARBP01000013_gene419	4.783e-50	182.0	COG0835@1|root,COG0835@2|Bacteria	2|Bacteria	NT	chemotaxis	cheW1	GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006935,GO:0008150,GO:0009605,GO:0019904,GO:0040011,GO:0042221,GO:0042330,GO:0044424,GO:0044444,GO:0044464,GO:0050896	-	ko:K03408	ko02020,ko02030,map02020,map02030	-	-	-	ko00000,ko00001,ko02035	-	-	-	CheW
BYD3_k127_6362914_0	1121904.ARBP01000013_gene420	4.896e-239	759.0	COG0840@1|root,COG0840@2|Bacteria,4NIJR@976|Bacteroidetes,47XEI@768503|Cytophagia	976|Bacteroidetes	NT	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).	-	-	-	ko:K03406	ko02020,ko02030,map02020,map02030	-	-	-	ko00000,ko00001,ko02035	-	-	-	CHASE3,HAMP,MCPsignal
BYD3_k127_6362914_10	1121904.ARBP01000079_gene6051	6.721e-24	105.0	COG0745@1|root,COG0745@2|Bacteria	1121904.ARBP01000079_gene6051|-	T	phosphorelay signal transduction system	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_6362914_12	1121904.ARBP01000006_gene3762	1.394e-09	70.0	COG4251@1|root,COG4251@2|Bacteria	2|Bacteria	T	photoreceptor activity	-	-	-	-	-	-	-	-	-	-	-	-	7TMR-DISMED2,7TMR-DISM_7TM,CheR,HATPase_c,HisKA,PAS_10,PAS_3,PAS_4,PAS_9,Response_reg
BYD3_k127_6362914_9	1296415.JACC01000030_gene2779	6.871e-42	158.0	COG3279@1|root,COG3279@2|Bacteria,4NFPV@976|Bacteroidetes,1I0QN@117743|Flavobacteriia,2YJJY@290174|Aquimarina	976|Bacteroidetes	T	LytTr DNA-binding domain	-	-	-	ko:K02477	-	-	-	-	ko00000,ko02022	-	-	-	LytTR,Response_reg
BYD3_k127_6369094_3	926556.Echvi_2200	4.318e-161	513.0	COG1186@1|root,COG1186@2|Bacteria,4NEN1@976|Bacteroidetes,47KHU@768503|Cytophagia	976|Bacteroidetes	J	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA	prfB	-	-	ko:K02836	-	-	-	-	ko00000,ko03012	-	-	-	PCRF,RF-1
BYD3_k127_6369094_5	1237149.C900_05494	1.812e-130	427.0	COG0477@1|root,COG2814@2|Bacteria,4NE7F@976|Bacteroidetes,47MD0@768503|Cytophagia	976|Bacteroidetes	EGP	PFAM Major Facilitator Superfamily	-	-	-	-	-	-	-	-	-	-	-	-	MFS_1,Sugar_tr
BYD3_k127_6369094_7	468059.AUHA01000003_gene1873	1.127e-29	126.0	COG3714@1|root,COG3714@2|Bacteria,4NMZ9@976|Bacteroidetes,1IU4I@117747|Sphingobacteriia	976|Bacteroidetes	S	YhhN family	-	-	-	-	-	-	-	-	-	-	-	-	YhhN
BYD3_k127_6369094_0	700598.Niako_3660	0.0	1229.0	COG3347@1|root,COG4221@1|root,COG3347@2|Bacteria,COG4221@2|Bacteria,4NEM0@976|Bacteroidetes,1IQ2J@117747|Sphingobacteriia	976|Bacteroidetes	IQ	rhamnulose-1-phosphate aldolase alcohol dehydrogenase	-	-	-	-	-	-	-	-	-	-	-	-	Aldolase_II,adh_short,adh_short_C2
BYD3_k127_6369094_2	1123248.KB893359_gene2079	3.335e-180	574.0	COG0697@1|root,2Z7ID@2|Bacteria,4NEHB@976|Bacteroidetes	976|Bacteroidetes	EG	L-rhamnose-proton symport protein (RhaT)	rhaT	-	-	ko:K02856	-	-	-	-	ko00000,ko02000	2.A.7.6	-	-	RhaT
BYD3_k127_6369094_6	1191523.MROS_0076	8.899e-47	171.0	COG3254@1|root,COG3254@2|Bacteria	2|Bacteria	S	rhamnose metabolic process	rhaU	-	5.1.3.32	ko:K03534	-	-	R10819	RC00563	ko00000,ko01000	-	-	-	rhaM
BYD3_k127_6369094_1	1121957.ATVL01000009_gene867	8.508e-313	986.0	COG3250@1|root,COG3250@2|Bacteria,4NGZH@976|Bacteroidetes,47M3M@768503|Cytophagia	976|Bacteroidetes	G	Belongs to the glycosyl hydrolase 2 family	-	-	-	-	-	-	-	-	-	-	-	-	Glyco_hydro_106,Glyco_hydro_2_N
BYD3_k127_6369094_8	991.IW20_11105	5.406e-11	69.0	COG4219@1|root,COG4219@2|Bacteria,4NDWS@976|Bacteroidetes,1IIR6@117743|Flavobacteriia,2P0FE@237|Flavobacterium	976|Bacteroidetes	KT	BlaR1 peptidase M56	-	-	-	-	-	-	-	-	-	-	-	-	CarbopepD_reg_2,Peptidase_M56,Plug,TonB_C
BYD3_k127_6369094_4	926556.Echvi_1618	2.12e-148	477.0	COG2188@1|root,COG2188@2|Bacteria,4PMHY@976|Bacteroidetes,47YD4@768503|Cytophagia	976|Bacteroidetes	K	helix_turn_helix gluconate operon transcriptional repressor	-	-	-	-	-	-	-	-	-	-	-	-	GntR,Peripla_BP_3
BYD3_k127_6386035_0	1237149.C900_05850	1.245e-242	755.0	COG0031@1|root,COG0031@2|Bacteria,4NDZ9@976|Bacteroidetes,47K1B@768503|Cytophagia	976|Bacteroidetes	E	Cystathionine beta-synthase	-	-	4.2.1.22	ko:K01697	ko00260,ko00270,ko01100,ko01130,ko01230,map00260,map00270,map01100,map01130,map01230	M00035,M00338	R00891,R01290,R04942	RC00056,RC00069,RC00256,RC00489,RC01246	ko00000,ko00001,ko00002,ko01000	-	-	-	CBS,PALP
BYD3_k127_6386035_1	866536.Belba_1946	5.322e-173	545.0	COG0540@1|root,COG0540@2|Bacteria,4NFIU@976|Bacteroidetes,47KS2@768503|Cytophagia	976|Bacteroidetes	F	Belongs to the ATCase OTCase family	pyrB	GO:0003674,GO:0003824,GO:0004070,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006220,GO:0006221,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009165,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0016740,GO:0016741,GO:0016743,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576	2.1.3.2	ko:K00609	ko00240,ko00250,ko01100,map00240,map00250,map01100	M00051	R01397	RC00064,RC02850	ko00000,ko00001,ko00002,ko01000	-	-	-	OTCace,OTCace_N
BYD3_k127_6386035_3	1237149.C900_05853	1.488e-79	269.0	COG2065@1|root,COG2065@2|Bacteria,4NFI1@976|Bacteroidetes,47MTK@768503|Cytophagia	976|Bacteroidetes	F	Pyrimidine operon attenuation protein uracil phosphoribosyltransferase	pyrR	-	2.4.2.9	ko:K02825	ko00240,ko01100,map00240,map01100	-	R00966	RC00063	ko00000,ko00001,ko01000,ko03000	-	-	-	Pribosyltran
BYD3_k127_6386035_4	1121287.AUMU01000005_gene3177	8.235e-75	261.0	COG0596@1|root,COG0596@2|Bacteria,4NPF5@976|Bacteroidetes,1I1PV@117743|Flavobacteriia,3ZUF2@59732|Chryseobacterium	976|Bacteroidetes	S	Serine aminopeptidase, S33	-	-	-	-	-	-	-	-	-	-	-	-	Abhydrolase_1,Hydrolase_4
BYD3_k127_6386035_2	714943.Mucpa_6578	5.028e-142	467.0	COG2197@1|root,COG2197@2|Bacteria,4PKZT@976|Bacteroidetes,1IRP0@117747|Sphingobacteriia	976|Bacteroidetes	KT	response regulator	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_6391800_4	1124780.ANNU01000012_gene3901	1.897e-07	53.0	COG2885@1|root,COG2885@2|Bacteria,4NEGF@976|Bacteroidetes,47PDZ@768503|Cytophagia	976|Bacteroidetes	M	Belongs to the ompA family	-	-	-	-	-	-	-	-	-	-	-	-	Gly-zipper_Omp,OmpA,PD40
BYD3_k127_6391800_1	929556.Solca_1281	3.193e-89	300.0	28I6D@1|root,2Z89E@2|Bacteria,4NIIX@976|Bacteroidetes,1IR84@117747|Sphingobacteriia	976|Bacteroidetes	S	EcsC protein family	-	-	-	-	-	-	-	-	-	-	-	-	EcsC
BYD3_k127_6391800_2	313606.M23134_02512	1.159e-22	107.0	2FG5W@1|root,3482C@2|Bacteria,4P5PR@976|Bacteroidetes,47VV9@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_6391800_0	196490.AUEZ01000058_gene1085	0.0	1055.0	COG0507@1|root,COG1112@1|root,COG2251@1|root,COG0507@2|Bacteria,COG1112@2|Bacteria,COG2251@2|Bacteria,1MWW9@1224|Proteobacteria,2TTSD@28211|Alphaproteobacteria,3JQNN@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	L	AAA domain	-	-	-	-	-	-	-	-	-	-	-	-	AAA_11,AAA_12,AAA_30,RNase_H_2
BYD3_k127_6391800_3	866536.Belba_2258	6.022e-10	70.0	COG0845@1|root,COG0845@2|Bacteria,4NI7Q@976|Bacteroidetes,47JYK@768503|Cytophagia	976|Bacteroidetes	M	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_639827_0	1121904.ARBP01000015_gene179	4.083e-167	555.0	COG0577@1|root,COG0577@2|Bacteria,4NDUK@976|Bacteroidetes,47NTJ@768503|Cytophagia	976|Bacteroidetes	V	MacB-like periplasmic core domain	-	-	-	ko:K02004	-	M00258	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	FtsX,MacB_PCD
BYD3_k127_639827_2	746697.Aeqsu_2760	9.198e-06	58.0	2BTQM@1|root,32NXS@2|Bacteria,4PFK3@976|Bacteroidetes,1I7AQ@117743|Flavobacteriia	976|Bacteroidetes	S	TIR domain	-	-	-	-	-	-	-	-	-	-	-	-	TIR_2
BYD3_k127_639827_1	1122603.ATVI01000005_gene3497	2.501e-43	177.0	COG5616@1|root,COG5616@2|Bacteria,1NSKC@1224|Proteobacteria,1T49A@1236|Gammaproteobacteria	1236|Gammaproteobacteria	S	cAMP biosynthetic process	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_6406813_0	1237149.C900_01780	0.0	1059.0	COG0532@1|root,COG0532@2|Bacteria,4NGP3@976|Bacteroidetes,47KGB@768503|Cytophagia	976|Bacteroidetes	J	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex	infB	-	-	ko:K02519	-	-	-	-	ko00000,ko03012,ko03029	-	-	-	GTP_EFTU,GTP_EFTU_D2,IF-2,IF2_N
BYD3_k127_6406813_4	925409.KI911562_gene1593	1.449e-80	278.0	COG1051@1|root,COG1051@2|Bacteria,4PMRX@976|Bacteroidetes,1J0YD@117747|Sphingobacteriia	976|Bacteroidetes	F	NUDIX domain	-	-	-	-	-	-	-	-	-	-	-	-	NUDIX
BYD3_k127_6406813_5	1120965.AUBV01000002_gene226	1.704e-79	269.0	COG1704@1|root,COG1704@2|Bacteria,4NMD3@976|Bacteroidetes,47JGT@768503|Cytophagia	976|Bacteroidetes	S	PFAM LemA family	lemA	-	-	ko:K03744	-	-	-	-	ko00000	-	-	-	LemA
BYD3_k127_6406813_2	1237149.C900_00792	1.813e-146	471.0	COG0216@1|root,COG0216@2|Bacteria,4NF72@976|Bacteroidetes,47M9W@768503|Cytophagia	976|Bacteroidetes	J	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA	prfA	-	-	ko:K02835	-	-	-	-	ko00000,ko03012	-	-	-	PCRF,RF-1
BYD3_k127_6406813_3	643867.Ftrac_2148	9.277e-92	304.0	COG2818@1|root,COG2818@2|Bacteria,4NGRC@976|Bacteroidetes,47PXB@768503|Cytophagia	976|Bacteroidetes	L	PFAM methyladenine glycosylase	tag	-	3.2.2.20	ko:K01246	ko03410,map03410	-	-	-	ko00000,ko00001,ko01000,ko03400	-	-	-	Adenine_glyco
BYD3_k127_6406813_6	1237149.C900_00788	4.145e-65	228.0	COG0251@1|root,COG0251@2|Bacteria,4NPF9@976|Bacteroidetes,47QAB@768503|Cytophagia	976|Bacteroidetes	J	translation initiation inhibitor, yjgF family	-	-	-	-	-	-	-	-	-	-	-	-	YjgF_endoribonc
BYD3_k127_6406813_7	1237149.C900_00783	1.745e-45	168.0	COG0454@1|root,COG0456@2|Bacteria,4NT3M@976|Bacteroidetes,47VFK@768503|Cytophagia	976|Bacteroidetes	K	Acetyltransferase (GNAT) family	-	-	-	-	-	-	-	-	-	-	-	-	Acetyltransf_1
BYD3_k127_6406813_1	1237149.C900_05514	2.265e-148	479.0	COG0626@1|root,COG0626@2|Bacteria,4PKE6@976|Bacteroidetes,47KC8@768503|Cytophagia	976|Bacteroidetes	E	Catalyzes the formation of L-homocysteine from O- succinyl-L-homoserine (OSHS) and hydrogen sulfide	-	-	2.5.1.48,4.4.1.8	ko:K01739,ko:K01760	ko00270,ko00450,ko00920,ko01100,ko01110,ko01130,ko01230,map00270,map00450,map00920,map01100,map01110,map01130,map01230	M00017	R00782,R00999,R01286,R01288,R02408,R02508,R03217,R03260,R04941,R04944,R04945,R04946	RC00020,RC00056,RC00069,RC00382,RC00420,RC00488,RC00710,RC01245,RC02303,RC02848,RC02866	ko00000,ko00001,ko00002,ko01000	-	-	-	Cys_Met_Meta_PP
BYD3_k127_6406813_9	1237149.C900_05518	7.02e-38	155.0	COG4585@1|root,COG4585@2|Bacteria,4NN4R@976|Bacteroidetes,47N81@768503|Cytophagia	976|Bacteroidetes	T	Histidine kinase	-	-	-	-	-	-	-	-	-	-	-	-	HATPase_c,HisKA_3
BYD3_k127_6406813_8	1237149.C900_05519	1.503e-41	157.0	COG2197@1|root,COG2197@2|Bacteria,4NKAD@976|Bacteroidetes,47NAQ@768503|Cytophagia	976|Bacteroidetes	T	helix_turn_helix, Lux Regulon	-	-	-	-	-	-	-	-	-	-	-	-	GerE,Response_reg
BYD3_k127_6420760_1	153721.MYP_2222	9.477e-184	580.0	COG0064@1|root,COG0064@2|Bacteria,4NF3B@976|Bacteroidetes,47K7E@768503|Cytophagia	976|Bacteroidetes	J	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)	gatB	-	6.3.5.6,6.3.5.7	ko:K02434	ko00970,ko01100,map00970,map01100	-	R03905,R04212	RC00010	ko00000,ko00001,ko01000,ko03029	-	-	-	GatB_N,GatB_Yqey
BYD3_k127_6420760_0	1237149.C900_01418	0.0	1212.0	COG0013@1|root,COG0013@2|Bacteria,4NFHW@976|Bacteroidetes,47KKH@768503|Cytophagia	976|Bacteroidetes	J	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain	alaS	GO:0003674,GO:0003824,GO:0004812,GO:0004813,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006412,GO:0006418,GO:0006419,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016597,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0031406,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0036094,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043177,GO:0043412,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576	6.1.1.7	ko:K01872	ko00970,map00970	M00359,M00360	R03038	RC00055,RC00523	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	-	-	-	DHHA1,tRNA-synt_2c,tRNA_SAD
BYD3_k127_6420760_2	1237149.C900_01411	7.992e-131	427.0	COG2843@1|root,COG2843@2|Bacteria,4NI6J@976|Bacteroidetes,47NKK@768503|Cytophagia	976|Bacteroidetes	M	Bacterial capsule synthesis protein PGA_cap	-	-	-	ko:K07282	-	-	-	-	ko00000	-	-	-	PGA_cap
BYD3_k127_6420760_3	643867.Ftrac_2908	3.38e-48	174.0	COG0789@1|root,COG0789@2|Bacteria,4NSBD@976|Bacteroidetes,47QJY@768503|Cytophagia	976|Bacteroidetes	K	transcriptional regulator	ycgE	-	-	-	-	-	-	-	-	-	-	-	MerR_1
BYD3_k127_6426422_0	1434325.AZQN01000003_gene2492	1.729e-193	612.0	COG0433@1|root,COG0433@2|Bacteria,4NF3P@976|Bacteroidetes,47M2I@768503|Cytophagia	976|Bacteroidetes	S	Bacterial protein of unknown function (DUF853)	-	-	-	ko:K06915	-	-	-	-	ko00000	-	-	-	DUF853
BYD3_k127_6426422_4	1237149.C900_03792	2.284e-97	327.0	COG3137@1|root,COG3137@2|Bacteria,4NGB2@976|Bacteroidetes,47NWC@768503|Cytophagia	976|Bacteroidetes	M	Protein of unknown function (DUF3078)	-	-	-	-	-	-	-	-	-	-	-	-	DUF3078
BYD3_k127_6426422_8	1237149.C900_03791	4.18e-67	230.0	COG2199@1|root,COG3706@2|Bacteria,4PKDN@976|Bacteroidetes,47QRP@768503|Cytophagia	976|Bacteroidetes	T	cheY-homologous receiver domain	-	-	-	-	-	-	-	-	-	-	-	-	Response_reg
BYD3_k127_6426422_2	1237149.C900_03789	4.779e-139	462.0	COG0741@1|root,COG1388@1|root,COG0741@2|Bacteria,COG1388@2|Bacteria,4NHG0@976|Bacteroidetes,47JZ1@768503|Cytophagia	976|Bacteroidetes	M	PFAM Transglycosylase SLT domain	-	-	-	ko:K08307	-	-	-	-	ko00000,ko01000,ko01011	-	-	-	LysM,SLT
BYD3_k127_6426422_5	1121859.KB890760_gene1988	1.296e-86	291.0	COG4122@1|root,COG4122@2|Bacteria,4NH42@976|Bacteroidetes,47KAK@768503|Cytophagia	976|Bacteroidetes	S	PFAM O-methyltransferase	mdmC	-	2.1.1.104	ko:K00588	ko00360,ko00940,ko00941,ko00945,ko01100,ko01110,map00360,map00940,map00941,map00945,map01100,map01110	M00039,M00350	R01942,R06578	RC00003,RC00392	ko00000,ko00001,ko00002,ko01000	-	-	-	Methyltransf_3
BYD3_k127_6426422_1	1237149.C900_03787	2.782e-144	469.0	COG0612@1|root,COG0612@2|Bacteria,4NEE4@976|Bacteroidetes,47JFQ@768503|Cytophagia	976|Bacteroidetes	S	PFAM Peptidase M16 inactive domain	-	-	-	-	-	-	-	-	-	-	-	-	Peptidase_M16,Peptidase_M16_C
BYD3_k127_6426422_3	1237149.C900_03785	8.265e-125	405.0	COG2820@1|root,COG2820@2|Bacteria,4NG5S@976|Bacteroidetes,47K9N@768503|Cytophagia	976|Bacteroidetes	F	PFAM Phosphorylase superfamily	udp	-	2.4.2.3	ko:K00757	ko00240,ko00983,ko01100,map00240,map00983,map01100	-	R01876,R02484,R08229	RC00063	ko00000,ko00001,ko01000	-	-	-	PNP_UDP_1
BYD3_k127_6426422_6	1237149.C900_03784	5.537e-78	267.0	COG0110@1|root,COG0110@2|Bacteria,4NNTF@976|Bacteroidetes,47PJQ@768503|Cytophagia	976|Bacteroidetes	S	sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family	-	-	-	-	-	-	-	-	-	-	-	-	Hexapep,Hexapep_2
BYD3_k127_6426422_7	1237149.C900_03783	6.947e-76	270.0	28ICP@1|root,32QUE@2|Bacteria,4NR8Q@976|Bacteroidetes,47QZP@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_642658_11	985255.APHJ01000023_gene2684	5.416e-40	150.0	COG1721@1|root,COG1721@2|Bacteria,4NFX4@976|Bacteroidetes,1HXMB@117743|Flavobacteriia,2P7E0@244698|Gillisia	976|Bacteroidetes	S	Protein of unknown function DUF58	-	-	-	-	-	-	-	-	-	-	-	-	DUF58
BYD3_k127_642658_6	1237149.C900_01434	2.009e-152	488.0	COG0714@1|root,COG0714@2|Bacteria,4NDVZ@976|Bacteroidetes,47KTK@768503|Cytophagia	976|Bacteroidetes	S	PFAM ATPase associated with various cellular activities	-	-	-	ko:K03924	-	-	-	-	ko00000,ko01000	-	-	-	AAA_3
BYD3_k127_642658_8	1237149.C900_01433	4.326e-118	383.0	COG1657@1|root,COG1657@2|Bacteria,4NFMT@976|Bacteroidetes,47JVT@768503|Cytophagia	976|Bacteroidetes	I	Domain of unknown function (DUF4159)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4159
BYD3_k127_642658_4	1358423.N180_02330	2.288e-216	678.0	COG0312@1|root,COG0312@2|Bacteria,4NE1F@976|Bacteroidetes,1IPHR@117747|Sphingobacteriia	976|Bacteroidetes	S	Putative modulator of DNA gyrase	-	-	-	ko:K03592	-	-	-	-	ko00000,ko01002	-	-	-	PmbA_TldD
BYD3_k127_642658_0	1408813.AYMG01000017_gene5626	9.656e-305	940.0	COG0312@1|root,COG0312@2|Bacteria,4NG2Y@976|Bacteroidetes	976|Bacteroidetes	S	Peptidase U62 modulator of DNA gyrase	tldD1	-	-	ko:K03568	-	-	-	-	ko00000,ko01002	-	-	-	PmbA_TldD
BYD3_k127_642658_5	1237149.C900_01432	2.519e-205	647.0	COG0312@1|root,COG0312@2|Bacteria,4NE1F@976|Bacteroidetes,47N7M@768503|Cytophagia	976|Bacteroidetes	S	Peptidase U62 modulator of DNA gyrase	tldD3	-	-	ko:K03592	-	-	-	-	ko00000,ko01002	-	-	-	PmbA_TldD
BYD3_k127_642658_2	886377.Murru_2857	3.464e-274	851.0	COG0312@1|root,COG0312@2|Bacteria,4NG2Y@976|Bacteroidetes,1HZ08@117743|Flavobacteriia	976|Bacteroidetes	S	and their inactivated homologs	tldD1	-	-	ko:K03568	-	-	-	-	ko00000,ko01002	-	-	-	PmbA_TldD
BYD3_k127_642658_1	865937.Gilli_3256	4.278e-286	885.0	COG0312@1|root,COG0312@2|Bacteria,4NG2Y@976|Bacteroidetes,1HZ08@117743|Flavobacteriia,2P7EQ@244698|Gillisia	976|Bacteroidetes	S	Putative modulator of DNA gyrase	tldD1	-	-	ko:K03568	-	-	-	-	ko00000,ko01002	-	-	-	PmbA_TldD
BYD3_k127_642658_3	929562.Emtol_2283	9.283e-256	792.0	COG0439@1|root,COG0439@2|Bacteria,4NFEQ@976|Bacteroidetes,47MHE@768503|Cytophagia	976|Bacteroidetes	I	TIGRFAM acetyl-CoA carboxylase, biotin carboxylase	accC	-	6.3.4.14,6.4.1.2	ko:K01961	ko00061,ko00620,ko00640,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00061,map00620,map00640,map00720,map01100,map01110,map01120,map01130,map01200,map01212	M00082,M00376	R00742,R04385	RC00040,RC00253,RC00367	ko00000,ko00001,ko00002,ko01000	-	-	-	Biotin_carb_C,Biotin_carb_N,CPSase_L_D2
BYD3_k127_642658_10	1237149.C900_00629	1.114e-56	203.0	COG0511@1|root,COG0511@2|Bacteria,4NM8U@976|Bacteroidetes,47PSK@768503|Cytophagia	976|Bacteroidetes	I	first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA	accB	-	-	ko:K02160	ko00061,ko00620,ko00640,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00061,map00620,map00640,map00720,map01100,map01110,map01120,map01130,map01200,map01212	M00082,M00376	R00742	RC00040,RC00367	ko00000,ko00001,ko00002	-	-	-	Biotin_lipoyl
BYD3_k127_642658_9	269798.CHU_1531	1.169e-69	241.0	COG0231@1|root,COG0231@2|Bacteria,4NDXA@976|Bacteroidetes,47MZS@768503|Cytophagia	976|Bacteroidetes	J	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase	efp	GO:0003674,GO:0003676,GO:0003723,GO:0003746,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006412,GO:0006414,GO:0006518,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576	-	ko:K02356	-	-	-	-	ko00000,ko03012	-	-	-	EFP,EFP_N,Elong-fact-P_C
BYD3_k127_642658_7	1279009.ADICEAN_02143	8.766e-144	460.0	COG0332@1|root,COG0332@2|Bacteria,4NEYH@976|Bacteroidetes,47KV4@768503|Cytophagia	976|Bacteroidetes	I	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids	fabH	GO:0003674,GO:0003824,GO:0006082,GO:0006629,GO:0006631,GO:0008150,GO:0008152,GO:0009987,GO:0016740,GO:0016746,GO:0016747,GO:0019752,GO:0032787,GO:0033818,GO:0043436,GO:0044237,GO:0044238,GO:0044255,GO:0044281,GO:0071704	2.3.1.180	ko:K00648	ko00061,ko01100,ko01212,map00061,map01100,map01212	M00082,M00083	R10707	RC00004,RC02729,RC02888	ko00000,ko00001,ko00002,ko01000,ko01004	-	-	-	ACP_syn_III,ACP_syn_III_C
BYD3_k127_6457754_4	1237149.C900_04595	3.455e-96	321.0	COG5009@1|root,COG5009@2|Bacteria,4NECJ@976|Bacteroidetes,47K6R@768503|Cytophagia	976|Bacteroidetes	M	Penicillin binding protein transpeptidase	pbpB	-	2.4.1.129,3.4.16.4	ko:K05366	ko00550,ko01100,ko01501,map00550,map01100,map01501	-	-	-	ko00000,ko00001,ko01000,ko01003,ko01011	-	GT51	-	Transgly,Transpeptidase
BYD3_k127_6457754_5	1321778.HMPREF1982_04528	2.208e-65	229.0	COG1247@1|root,COG1247@2|Bacteria,1VJ3A@1239|Firmicutes,25GYK@186801|Clostridia	186801|Clostridia	M	Acetyltransferase (GNAT) family	-	-	-	-	-	-	-	-	-	-	-	-	Acetyltransf_1
BYD3_k127_6457754_7	1250232.JQNJ01000001_gene1073	2.314e-27	116.0	2DG1V@1|root,2ZU42@2|Bacteria,4P88S@976|Bacteroidetes,1IB24@117743|Flavobacteriia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_6457754_2	1185876.BN8_00899	3.995e-185	606.0	COG0577@1|root,COG0577@2|Bacteria,4NM3D@976|Bacteroidetes,47JF6@768503|Cytophagia	976|Bacteroidetes	V	MacB-like periplasmic core domain	-	-	-	ko:K02004	-	M00258	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	FtsX,MacB_PCD
BYD3_k127_6457754_0	504472.Slin_3338	7.322e-206	644.0	COG2730@1|root,COG2730@2|Bacteria,4NGAC@976|Bacteroidetes,47MSS@768503|Cytophagia	976|Bacteroidetes	G	Belongs to the glycosyl hydrolase 5 (cellulase A) family	-	-	3.2.1.4	ko:K01179	ko00500,ko01100,map00500,map01100	-	R06200,R11307,R11308	-	ko00000,ko00001,ko01000	-	GH5,GH9	-	Cellulase
BYD3_k127_6457754_6	1123248.KB893337_gene2566	1.621e-38	146.0	COG5470@1|root,COG5470@2|Bacteria,4NUEC@976|Bacteroidetes,1IZ1F@117747|Sphingobacteriia	976|Bacteroidetes	S	Domain of unknown function (DUF1330)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1330
BYD3_k127_6457754_3	761193.Runsl_1670	1.569e-108	357.0	COG1028@1|root,COG1028@2|Bacteria,4NF64@976|Bacteroidetes,47MEC@768503|Cytophagia	976|Bacteroidetes	IQ	PFAM Short-chain dehydrogenase reductase SDR	-	-	1.1.1.100	ko:K00059	ko00061,ko00333,ko00780,ko01040,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01040,map01100,map01130,map01212	M00083,M00572	R04533,R04534,R04536,R04543,R04566,R04953,R04964,R07759,R07763,R10116,R10120,R11671	RC00029,RC00117	ko00000,ko00001,ko00002,ko01000,ko01004	-	-	-	adh_short_C2
BYD3_k127_6457754_1	1123248.KB893338_gene2316	2.705e-190	601.0	COG0129@1|root,COG0129@2|Bacteria,4NEKY@976|Bacteroidetes,1IQEN@117747|Sphingobacteriia	976|Bacteroidetes	EG	Belongs to the IlvD Edd family	-	-	-	-	-	-	-	-	-	-	-	-	ILVD_EDD
BYD3_k127_6464969_1	485917.Phep_2204	2.891e-193	610.0	COG4146@1|root,COG4146@2|Bacteria,4NE9S@976|Bacteroidetes,1IV50@117747|Sphingobacteriia	976|Bacteroidetes	S	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family	-	-	-	ko:K03307	-	-	-	-	ko00000	2.A.21	-	-	SSF
BYD3_k127_6464969_3	1279009.ADICEAN_00120	1.286e-136	437.0	COG0647@1|root,COG0647@2|Bacteria,4NG49@976|Bacteroidetes,47KF3@768503|Cytophagia	976|Bacteroidetes	G	Haloacid dehalogenase-like hydrolase	-	-	-	ko:K02566	-	-	-	-	ko00000	-	-	-	Hydrolase_6,Hydrolase_like
BYD3_k127_6464969_0	1270196.JCKI01000009_gene3262	3.447e-231	730.0	COG3534@1|root,COG3534@2|Bacteria,4NECK@976|Bacteroidetes,1IP52@117747|Sphingobacteriia	976|Bacteroidetes	G	Alpha-L-arabinofuranosidase domain protein	-	-	3.2.1.55	ko:K01209	ko00520,map00520	-	R01762	-	ko00000,ko00001,ko01000	-	GH51	-	Alpha-L-AF_C
BYD3_k127_6464969_2	1123248.KB893325_gene1170	5.734e-152	486.0	COG3622@1|root,COG3622@2|Bacteria,4NG0V@976|Bacteroidetes,1INUU@117747|Sphingobacteriia	976|Bacteroidetes	G	Hydroxypyruvate isomerase	-	-	5.3.1.22	ko:K01816	ko00630,ko01100,map00630,map01100	-	R01394	RC00511	ko00000,ko00001,ko01000	-	-	-	AP_endonuc_2
BYD3_k127_6464969_4	1392488.JHZY01000002_gene579	7.416e-44	166.0	COG4888@1|root,COG4888@2|Bacteria,4NEE8@976|Bacteroidetes,1HX4C@117743|Flavobacteriia,2XJ0R@283735|Leeuwenhoekiella	976|Bacteroidetes	S	ASPIC and UnbV	-	-	-	-	-	-	-	-	-	-	-	-	UnbV_ASPIC,VCBS
BYD3_k127_6479622_6	1121373.KB903620_gene2082	7.485e-82	280.0	COG3408@1|root,COG3408@2|Bacteria,4NF09@976|Bacteroidetes,47M96@768503|Cytophagia	976|Bacteroidetes	G	Glycogen debranching enzyme	-	-	-	-	-	-	-	-	-	-	-	-	GDE_C,GDE_N
BYD3_k127_6479622_0	1519464.HY22_05320	0.0	1297.0	COG2334@1|root,COG2334@2|Bacteria	2|Bacteria	S	homoserine kinase activity	-	-	2.7.1.39	ko:K02204	ko00260,ko01100,ko01110,ko01120,ko01230,map00260,map01100,map01110,map01120,map01230	M00018	R01771	RC00002,RC00017	ko00000,ko00001,ko00002,ko01000	-	-	-	APH,Glyco_hydro_63
BYD3_k127_6479622_4	118161.KB235922_gene2998	1.968e-114	374.0	COG1028@1|root,COG1028@2|Bacteria,1G0IE@1117|Cyanobacteria	1117|Cyanobacteria	IQ	PFAM short chain dehydrogenase	-	-	1.1.1.47	ko:K00034	ko00030,ko01120,ko01200,map00030,map01120,map01200	-	R01520,R01521	RC00066	ko00000,ko00001,ko01000	-	-	-	adh_short,adh_short_C2
BYD3_k127_6479622_8	313606.M23134_02467	4.349e-31	130.0	COG0664@1|root,COG0664@2|Bacteria,4NKW5@976|Bacteroidetes,47N83@768503|Cytophagia	976|Bacteroidetes	K	Crp-like helix-turn-helix domain	-	-	-	ko:K10914	ko02020,ko02024,ko02025,ko02026,ko05111,map02020,map02024,map02025,map02026,map05111	-	-	-	ko00000,ko00001,ko03000	-	-	-	HTH_Crp_2,cNMP_binding
BYD3_k127_6479622_10	313612.L8106_17652	2.284e-10	66.0	COG3118@1|root,COG3118@2|Bacteria,1G83H@1117|Cyanobacteria,1HCMA@1150|Oscillatoriales	1117|Cyanobacteria	O	Thioredoxin-like domain	-	-	-	ko:K03671	ko04621,ko05418,map04621,map05418	-	-	-	ko00000,ko00001,ko03110	-	-	-	Thioredoxin
BYD3_k127_6479622_2	1210884.HG799463_gene9619	2.066e-146	492.0	COG3829@1|root,COG3829@2|Bacteria	2|Bacteria	T	transcription factor binding	-	-	-	ko:K15836	-	-	-	-	ko00000,ko03000	-	-	-	GAF_2,HTH_8,PAS,PAS_4,PAS_9,Sigma54_activat
BYD3_k127_6479622_7	1237149.C900_04344	3.315e-48	180.0	COG0156@1|root,COG0156@2|Bacteria,4NFRY@976|Bacteroidetes,47KDV@768503|Cytophagia	976|Bacteroidetes	E	PFAM Aminotransferase class I and II	-	-	2.3.1.29	ko:K00639	ko00260,map00260	-	R00371	RC00004,RC00394	ko00000,ko00001,ko01000,ko01007	-	-	-	Aminotran_1_2
BYD3_k127_6479622_9	1121957.ATVL01000008_gene4045	1.142e-15	80.0	COG0156@1|root,COG0156@2|Bacteria,4NFRY@976|Bacteroidetes,47KDV@768503|Cytophagia	976|Bacteroidetes	E	PFAM Aminotransferase class I and II	-	-	2.3.1.29	ko:K00639	ko00260,map00260	-	R00371	RC00004,RC00394	ko00000,ko00001,ko01000,ko01007	-	-	-	Aminotran_1_2
BYD3_k127_6479622_3	1296415.JACC01000030_gene2778	1.672e-140	469.0	COG0457@1|root,COG2972@1|root,COG0457@2|Bacteria,COG2972@2|Bacteria,4NF45@976|Bacteroidetes,1HXAW@117743|Flavobacteriia,2YGNW@290174|Aquimarina	976|Bacteroidetes	T	Tetratricopeptide repeat	-	-	-	-	-	-	-	-	-	-	-	-	His_kinase,TPR_10,TPR_12,TPR_7,TPR_8
BYD3_k127_6479622_5	1296415.JACC01000030_gene2779	2.504e-84	287.0	COG3279@1|root,COG3279@2|Bacteria,4NFPV@976|Bacteroidetes,1I0QN@117743|Flavobacteriia,2YJJY@290174|Aquimarina	976|Bacteroidetes	T	LytTr DNA-binding domain	-	-	-	ko:K02477	-	-	-	-	ko00000,ko02022	-	-	-	LytTR,Response_reg
BYD3_k127_6479622_1	1121904.ARBP01000038_gene2554	1.946e-279	865.0	COG2382@1|root,COG2382@2|Bacteria,4NF50@976|Bacteroidetes,47KAW@768503|Cytophagia	976|Bacteroidetes	P	Putative esterase	-	-	-	ko:K07214	-	-	-	-	ko00000	-	-	-	Esterase,SASA
BYD3_k127_6491934_2	761193.Runsl_5945	2.665e-128	419.0	COG3696@1|root,COG3696@2|Bacteria,4P36A@976|Bacteroidetes,47N7N@768503|Cytophagia	976|Bacteroidetes	P	AcrB/AcrD/AcrF family	-	-	-	ko:K07787,ko:K15726	ko02020,map02020	-	-	-	ko00000,ko00001,ko02000	2.A.6.1.2,2.A.6.1.4	-	-	ACR_tran
BYD3_k127_6491934_0	1123248.KB893315_gene2979	2.165e-189	600.0	COG2132@1|root,COG2132@2|Bacteria,4NE3N@976|Bacteroidetes,1IWFY@117747|Sphingobacteriia	976|Bacteroidetes	Q	Multicopper oxidase	-	-	-	-	-	-	-	-	-	-	-	-	Cu-oxidase,Cu-oxidase_2,Cu-oxidase_3
BYD3_k127_6491934_9	926556.Echvi_3204	4.055e-55	201.0	COG4319@1|root,COG4319@2|Bacteria,4PKP4@976|Bacteroidetes,47YGA@768503|Cytophagia	976|Bacteroidetes	S	Protein of unknown function (DUF2911)	-	-	-	-	-	-	-	-	-	-	-	-	DUF2911
BYD3_k127_6491934_11	1198232.CYCME_1432	4.31e-46	174.0	COG2717@1|root,COG2717@2|Bacteria,1PUNJ@1224|Proteobacteria,1SUFV@1236|Gammaproteobacteria	1236|Gammaproteobacteria	C	Ferric reductase like transmembrane component	-	-	-	ko:K17247	-	-	-	-	ko00000	-	-	-	Ferric_reduct
BYD3_k127_6491934_4	385682.AFSL01000040_gene257	4.4e-98	334.0	COG0583@1|root,COG0583@2|Bacteria,4NGZ5@976|Bacteroidetes,2FNH6@200643|Bacteroidia,3XJM8@558415|Marinilabiliaceae	976|Bacteroidetes	K	Bacterial regulatory helix-turn-helix protein, lysR family	oxyR	-	-	ko:K04761	ko02026,map02026	-	-	-	ko00000,ko00001,ko03000	-	-	-	HTH_1,LysR_substrate
BYD3_k127_6491934_10	485918.Cpin_7088	1.236e-53	194.0	COG1510@1|root,COG1510@2|Bacteria,4NQPD@976|Bacteroidetes,1ISGU@117747|Sphingobacteriia	976|Bacteroidetes	K	Belongs to the GbsR family	-	-	-	-	-	-	-	-	-	-	-	-	HTH_5,MarR_2,TrmB
BYD3_k127_6491934_5	1121904.ARBP01000001_gene5783	5.532e-78	270.0	COG3011@1|root,COG3011@2|Bacteria,4NN81@976|Bacteroidetes,47XU9@768503|Cytophagia	976|Bacteroidetes	S	Protein conserved in bacteria	-	-	-	-	-	-	-	-	-	-	-	-	DUF393
BYD3_k127_6491934_3	1270196.JCKI01000001_gene3505	1.234e-111	368.0	COG1090@1|root,COG1090@2|Bacteria,4NH8J@976|Bacteroidetes,1IPH3@117747|Sphingobacteriia	976|Bacteroidetes	S	NAD dependent epimerase dehydratase	-	-	-	ko:K07071	-	-	-	-	ko00000	-	-	-	DUF1731,Epimerase
BYD3_k127_6491934_13	1300143.CCAV010000002_gene49	6.888e-45	168.0	COG4276@1|root,COG4276@2|Bacteria,4NQ3V@976|Bacteroidetes,1I398@117743|Flavobacteriia,3ZRYA@59732|Chryseobacterium	976|Bacteroidetes	S	Cell division protein	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_6491934_8	1237149.C900_05477	4.178e-63	221.0	COG1595@1|root,COG1595@2|Bacteria,4NMYQ@976|Bacteroidetes,47PII@768503|Cytophagia	976|Bacteroidetes	K	TIGRFAM RNA polymerase sigma factor, sigma-70 family	-	-	-	ko:K03088	-	-	-	-	ko00000,ko03021	-	-	-	Sigma70_r2,Sigma70_r4_2
BYD3_k127_6491934_14	1237149.C900_05478	6.048e-39	154.0	COG1413@1|root,COG1413@2|Bacteria,4NY24@976|Bacteroidetes	976|Bacteroidetes	C	lyase activity	-	-	-	-	-	-	-	-	-	-	-	-	HEAT_2
BYD3_k127_6491934_7	1233951.IO90_14015	2.691e-64	229.0	COG3595@1|root,COG3595@2|Bacteria,4NKSN@976|Bacteroidetes,1I2JR@117743|Flavobacteriia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	DUF4097
BYD3_k127_6491934_6	1233951.IO90_14010	5.593e-70	246.0	COG3595@1|root,COG3595@2|Bacteria,4NT4J@976|Bacteroidetes,1I4N5@117743|Flavobacteriia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_6491934_12	485918.Cpin_2027	4.321e-46	170.0	COG1959@1|root,COG1959@2|Bacteria,4NNN2@976|Bacteroidetes,1ISUE@117747|Sphingobacteriia	976|Bacteroidetes	K	transcriptional regulator	cymR	-	-	-	-	-	-	-	-	-	-	-	Rrf2
BYD3_k127_6491934_1	485917.Phep_2085	1.538e-179	572.0	COG2855@1|root,COG2855@2|Bacteria,4NES6@976|Bacteroidetes,1IQMA@117747|Sphingobacteriia	976|Bacteroidetes	S	PFAM Uncharacterised protein family UPF0324	-	-	-	-	-	-	-	-	-	-	-	-	Cons_hypoth698
BYD3_k127_6496957_3	153721.MYP_3666	2.74e-27	117.0	COG1538@1|root,COG1538@2|Bacteria,4NF4X@976|Bacteroidetes,47KE9@768503|Cytophagia	976|Bacteroidetes	MU	PFAM Outer membrane efflux protein	-	-	-	-	-	-	-	-	-	-	-	-	OEP
BYD3_k127_6496957_1	1237149.C900_01639	1.859e-73	252.0	COG1309@1|root,COG1309@2|Bacteria,4NQ99@976|Bacteroidetes,47QGN@768503|Cytophagia	976|Bacteroidetes	K	PFAM Bacterial regulatory proteins, tetR family	-	-	-	-	-	-	-	-	-	-	-	-	TetR_N
BYD3_k127_6496957_4	1121957.ATVL01000008_gene4638	5.47e-17	85.0	2E5Q2@1|root,330EP@2|Bacteria,4NUMS@976|Bacteroidetes,47SBQ@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_6496957_2	269798.CHU_1616	4.102e-62	219.0	COG1595@1|root,COG1595@2|Bacteria,4NN4K@976|Bacteroidetes,47QDX@768503|Cytophagia	976|Bacteroidetes	K	TIGRFAM RNA polymerase sigma factor, sigma-70 family	fecI	-	-	-	-	-	-	-	-	-	-	-	Sigma70_r2,Sigma70_r4,Sigma70_r4_2
BYD3_k127_6496957_0	1288963.ADIS_2103	1.152e-148	485.0	COG0471@1|root,COG0471@2|Bacteria,4NFDK@976|Bacteroidetes,47JJT@768503|Cytophagia	976|Bacteroidetes	P	PFAM Sodium sulfate symporter transmembrane region	-	-	-	ko:K14445	-	-	-	-	ko00000,ko02000	2.A.47.1	-	-	Na_sulph_symp
BYD3_k127_6496957_5	1408813.AYMG01000025_gene2702	5.757e-14	77.0	COG0642@1|root,COG0784@1|root,COG0784@2|Bacteria,COG2205@2|Bacteria,4NFEF@976|Bacteroidetes,1IQWZ@117747|Sphingobacteriia	976|Bacteroidetes	T	Histidine kinase	-	-	-	-	-	-	-	-	-	-	-	-	HATPase_c,HisKA,Hpt,Response_reg
BYD3_k127_6507647_4	525373.HMPREF0766_10895	9.605e-06	52.0	2ES5S@1|root,33JQJ@2|Bacteria,4NZ72@976|Bacteroidetes,1IY1Z@117747|Sphingobacteriia	976|Bacteroidetes	S	Domain of unknown function (DUF4359)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4359
BYD3_k127_6507647_5	1282876.BAOK01000001_gene1183	0.0001574	51.0	COG2717@1|root,COG2717@2|Bacteria,1R4CY@1224|Proteobacteria,2U37R@28211|Alphaproteobacteria	28211|Alphaproteobacteria	C	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. MsrQ provides electrons for reduction to the reductase catalytic subunit MsrP, using the quinone pool of the respiratory chain	-	-	-	-	-	-	-	-	-	-	-	-	Ferric_reduct
BYD3_k127_6507647_3	1034943.BN1094_02732	3.203e-118	391.0	COG2170@1|root,COG2170@2|Bacteria,1MX4N@1224|Proteobacteria,1RRZ1@1236|Gammaproteobacteria,1JCFE@118969|Legionellales	118969|Legionellales	H	ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity	-	-	-	ko:K06048	-	-	-	-	ko00000,ko01000	-	-	-	GCS2
BYD3_k127_6507647_0	1237149.C900_01149	4.047e-278	867.0	COG0367@1|root,COG0367@2|Bacteria,4NFQ3@976|Bacteroidetes,47JSF@768503|Cytophagia	976|Bacteroidetes	E	Asparagine synthase	asnB	-	6.3.5.4	ko:K01953	ko00250,ko01100,ko01110,map00250,map01100,map01110	-	R00578	RC00010	ko00000,ko00001,ko01000,ko01002	-	-	-	Asn_synthase,GATase_7
BYD3_k127_6507647_1	643867.Ftrac_2237	1.494e-275	854.0	COG1228@1|root,COG1228@2|Bacteria,4NG0U@976|Bacteroidetes,47NDK@768503|Cytophagia	976|Bacteroidetes	Q	Amidohydrolase family	-	-	-	-	-	-	-	-	-	-	-	-	Amidohydro_1
BYD3_k127_6507647_2	761193.Runsl_0593	4.016e-147	470.0	COG0004@1|root,COG0004@2|Bacteria,4NDV2@976|Bacteroidetes,47K09@768503|Cytophagia	976|Bacteroidetes	P	Ammonium Transporter	-	-	-	ko:K03320	-	-	-	-	ko00000,ko02000	1.A.11	-	-	Ammonium_transp
BYD3_k127_651122_2	926562.Oweho_1034	6.847e-107	354.0	COG4775@1|root,COG4775@2|Bacteria	2|Bacteria	M	membrane organization	-	-	-	-	-	-	-	-	-	-	-	-	Bac_surface_Ag
BYD3_k127_651122_4	1237149.C900_05257	4.863e-35	145.0	29N3N@1|root,33SHJ@2|Bacteria,4P1XQ@976|Bacteroidetes,47TMQ@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_651122_1	1450525.JATV01000001_gene2502	1.653e-107	360.0	COG0628@1|root,COG0628@2|Bacteria,4NN3B@976|Bacteroidetes,1HYEH@117743|Flavobacteriia,2NUR6@237|Flavobacterium	976|Bacteroidetes	S	AI-2E family transporter	-	-	-	-	-	-	-	-	-	-	-	-	AI-2E_transport
BYD3_k127_651122_0	1239962.C943_01001	1.057e-146	473.0	COG0845@1|root,COG0845@2|Bacteria,4NIDC@976|Bacteroidetes,47M9U@768503|Cytophagia	976|Bacteroidetes	M	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family	-	-	-	ko:K03585	ko01501,ko01503,map01501,map01503	M00646,M00647,M00699,M00718	-	-	ko00000,ko00001,ko00002,ko01504,ko02000,ko03036	2.A.6.2,8.A.1.6	-	-	HlyD_D23
BYD3_k127_6513824_0	1279009.ADICEAN_02505	1.535e-292	906.0	COG0465@1|root,COG0465@2|Bacteria,4NF0E@976|Bacteroidetes,47KKF@768503|Cytophagia	976|Bacteroidetes	O	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins	ftsH	-	-	ko:K03798	-	M00742	-	-	ko00000,ko00002,ko01000,ko01002,ko03110	-	-	-	AAA,FtsH_ext,Peptidase_M41
BYD3_k127_6513824_1	1237149.C900_05722	6.216e-123	398.0	COG2908@1|root,COG2908@2|Bacteria,4NEF1@976|Bacteroidetes,47JQJ@768503|Cytophagia	976|Bacteroidetes	S	Calcineurin-like phosphoesterase	lpxH	-	3.6.1.54	ko:K03269	ko00540,ko01100,map00540,map01100	M00060	R04549	RC00002	ko00000,ko00001,ko00002,ko01000,ko01005	-	-	-	Metallophos,Metallophos_2
BYD3_k127_6513824_3	1237149.C900_05723	3.407e-13	79.0	2CGN1@1|root,32S49@2|Bacteria,4NQPU@976|Bacteroidetes,47R8D@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_6513824_2	1237149.C900_05728	4.406e-33	132.0	COG2204@1|root,COG2204@2|Bacteria,4NE89@976|Bacteroidetes,47JF9@768503|Cytophagia	976|Bacteroidetes	T	two component, sigma54 specific, transcriptional regulator, Fis family	-	-	-	-	-	-	-	-	-	-	-	-	HTH_8,Response_reg,Sigma54_activat
BYD3_k127_655690_0	1121904.ARBP01000004_gene1108	8.076e-288	903.0	COG0577@1|root,COG0577@2|Bacteria,4NDUK@976|Bacteroidetes,47JJN@768503|Cytophagia	976|Bacteroidetes	V	FtsX-like permease family	-	-	-	-	-	-	-	-	-	-	-	-	FtsX,MacB_PCD
BYD3_k127_655690_15	745718.JADT01000008_gene3179	7.316e-07	63.0	COG1520@1|root,COG1520@2|Bacteria,4NMP7@976|Bacteroidetes,1I1N3@117743|Flavobacteriia	976|Bacteroidetes	S	PQQ-like domain	-	-	-	-	-	-	-	-	-	-	-	-	PQQ_2
BYD3_k127_655690_14	762903.Pedsa_0117	5.407e-22	100.0	COG0633@1|root,COG0633@2|Bacteria,4PJ1V@976|Bacteroidetes,1IZ8M@117747|Sphingobacteriia	976|Bacteroidetes	C	PFAM 2Fe-2S iron-sulfur cluster binding domain	-	-	-	ko:K04755	-	-	-	-	ko00000	-	-	-	Fer2
BYD3_k127_655690_5	1111730.ATTM01000002_gene1204	8.263e-76	261.0	COG2846@1|root,COG2846@2|Bacteria,4NE9M@976|Bacteroidetes,1HXS5@117743|Flavobacteriia,2NUSC@237|Flavobacterium	976|Bacteroidetes	D	Di-iron-containing protein involved in the repair of iron-sulfur clusters	ric	-	-	ko:K07322	-	-	-	-	ko00000	-	-	-	Hemerythrin,ScdA_N
BYD3_k127_655690_11	649349.Lbys_0337	1.111e-28	123.0	2E3RQ@1|root,32YPC@2|Bacteria,4NRGB@976|Bacteroidetes,47RQ7@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_655690_8	1550091.JROE01000026_gene3877	7.62e-54	192.0	COG2010@1|root,COG2010@2|Bacteria,4NQNG@976|Bacteroidetes,1IXSG@117747|Sphingobacteriia	976|Bacteroidetes	C	Cytochrome c	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_655690_13	762903.Pedsa_0122	8.308e-26	108.0	2E58U@1|root,33018@2|Bacteria,4NVWZ@976|Bacteroidetes,1IZ66@117747|Sphingobacteriia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_655690_4	1123248.KB893326_gene1362	9.028e-135	437.0	COG2010@1|root,COG2993@1|root,COG2010@2|Bacteria,COG2993@2|Bacteria,4NEM7@976|Bacteroidetes,1IW5F@117747|Sphingobacteriia	976|Bacteroidetes	C	PFAM cytochrome C oxidase mono-heme subunit FixO	-	-	-	ko:K00405	ko00190,ko01100,ko02020,map00190,map01100,map02020	M00156	-	-	ko00000,ko00001,ko00002	3.D.4.3	-	-	Cytochrom_C,Cytochrome_CBB3,FixO
BYD3_k127_655690_1	929713.NIASO_20615	2.094e-266	836.0	COG3278@1|root,COG3278@2|Bacteria,4NEGM@976|Bacteroidetes,1IPJV@117747|Sphingobacteriia	976|Bacteroidetes	C	PFAM cytochrome c oxidase subunit I	-	-	1.9.3.1	ko:K00404	ko00190,ko01100,ko02020,map00190,map01100,map02020	M00156	-	-	ko00000,ko00001,ko00002,ko01000	3.D.4.3	-	-	COX1
BYD3_k127_655690_7	700598.Niako_4174	7.65e-56	198.0	COG1959@1|root,COG1959@2|Bacteria,4NQGU@976|Bacteroidetes,1ISW6@117747|Sphingobacteriia	976|Bacteroidetes	K	transcriptional regulator	-	-	-	-	-	-	-	-	-	-	-	-	Rrf2
BYD3_k127_655690_12	204669.Acid345_2280	4.656e-28	118.0	COG0346@1|root,COG0346@2|Bacteria,3Y7U4@57723|Acidobacteria,2JN3V@204432|Acidobacteriia	204432|Acidobacteriia	E	lactoylglutathione lyase activity	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_655690_10	1121904.ARBP01000017_gene5134	6.632e-37	141.0	COG1695@1|root,COG1695@2|Bacteria,4P6G7@976|Bacteroidetes,47VZ7@768503|Cytophagia	976|Bacteroidetes	K	Transcriptional regulator PadR-like family	-	-	-	-	-	-	-	-	-	-	-	-	PadR
BYD3_k127_655690_2	1121904.ARBP01000008_gene3331	1.404e-186	615.0	COG0577@1|root,COG0577@2|Bacteria,4NDUK@976|Bacteroidetes,47JJN@768503|Cytophagia	976|Bacteroidetes	V	FtsX-like permease family	-	-	-	ko:K02004	-	M00258	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	FtsX,MacB_PCD
BYD3_k127_655690_3	153721.MYP_4380	3.753e-182	577.0	COG2141@1|root,COG2141@2|Bacteria,4NHGI@976|Bacteroidetes,47MJ4@768503|Cytophagia	976|Bacteroidetes	C	Luciferase-like monooxygenase	yhbW	-	-	-	-	-	-	-	-	-	-	-	Bac_luciferase
BYD3_k127_655690_6	118173.KB235911_gene112	1.479e-64	231.0	COG4430@1|root,COG4430@2|Bacteria,1G2ES@1117|Cyanobacteria,1HBP2@1150|Oscillatoriales	1117|Cyanobacteria	S	Bacteriocin-protection, YdeI or OmpD-Associated	-	-	-	-	-	-	-	-	-	-	-	-	OmdA
BYD3_k127_655690_9	1122176.KB903533_gene2268	1.733e-44	164.0	COG3000@1|root,COG3000@2|Bacteria,4PKP1@976|Bacteroidetes	976|Bacteroidetes	I	Protein of unknown function (DUF3703)	-	-	-	-	-	-	-	-	-	-	-	-	DUF3703
BYD3_k127_6563286_1	714943.Mucpa_6661	1.402e-145	467.0	COG0362@1|root,COG0362@2|Bacteria,4NG05@976|Bacteroidetes,1IPZC@117747|Sphingobacteriia	976|Bacteroidetes	G	Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH	gnd	-	1.1.1.343,1.1.1.44	ko:K00033	ko00030,ko00480,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map00480,map01100,map01110,map01120,map01130,map01200	M00004,M00006	R01528,R10221	RC00001,RC00539	ko00000,ko00001,ko00002,ko01000	-	-	-	6PGD,NAD_binding_2
BYD3_k127_6563286_0	714943.Mucpa_6662	3.791e-246	767.0	COG0364@1|root,COG0364@2|Bacteria,4NE59@976|Bacteroidetes,1IQZ7@117747|Sphingobacteriia	976|Bacteroidetes	G	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone	zwf	-	1.1.1.363,1.1.1.49	ko:K00036	ko00030,ko00480,ko01100,ko01110,ko01120,ko01130,ko01200,ko05230,map00030,map00480,map01100,map01110,map01120,map01130,map01200,map05230	M00004,M00006,M00008	R00835,R02736,R10907	RC00001,RC00066	ko00000,ko00001,ko00002,ko01000,ko04147	-	-	-	G6PD_C,G6PD_N
BYD3_k127_6563286_2	1121012.AUKX01000001_gene1320	6.669e-114	379.0	COG0793@1|root,COG0793@2|Bacteria,4NEK8@976|Bacteroidetes,1HYIK@117743|Flavobacteriia,23HP6@178469|Arenibacter	976|Bacteroidetes	M	Peptidase family S41	-	-	-	-	-	-	-	-	-	-	-	-	Peptidase_S41
BYD3_k127_6564058_0	1237149.C900_00949	8.39e-187	601.0	COG0616@1|root,COG0616@2|Bacteria,4NES1@976|Bacteroidetes,47KQH@768503|Cytophagia	976|Bacteroidetes	OU	signal peptide peptidase SppA, 36K type	sppA	-	-	ko:K04773	-	-	-	-	ko00000,ko01000,ko01002	-	-	-	Peptidase_S49
BYD3_k127_6564058_4	1123278.KB893389_gene4223	5.73e-48	183.0	COG0801@1|root,COG0801@2|Bacteria,4NGE8@976|Bacteroidetes,47QG8@768503|Cytophagia	976|Bacteroidetes	H	TIGRFAM 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase	folK	-	2.7.6.3	ko:K00950	ko00790,ko01100,map00790,map01100	M00126,M00841	R03503	RC00002,RC00017	ko00000,ko00001,ko00002,ko01000	-	-	-	HPPK,dNK
BYD3_k127_6564058_1	153721.MYP_1451	5.591e-144	462.0	COG0331@1|root,COG0331@2|Bacteria,4NE1D@976|Bacteroidetes,47JDE@768503|Cytophagia	976|Bacteroidetes	I	malonyl CoA-acyl carrier protein transacylase	fabD	-	2.3.1.39	ko:K00645	ko00061,ko00333,ko01100,ko01130,ko01212,map00061,map00333,map01100,map01130,map01212	M00082	R01626,R11671	RC00004,RC00039,RC02727	ko00000,ko00001,ko00002,ko01000,ko01004	-	-	-	Acyl_transf_1
BYD3_k127_6564058_5	376686.Fjoh_5041	3.945e-34	137.0	COG1670@1|root,COG1670@2|Bacteria,4NQEC@976|Bacteroidetes,1I3F6@117743|Flavobacteriia,2NU1Y@237|Flavobacterium	976|Bacteroidetes	J	GNAT family acetyltransferase	-	-	2.3.1.128	ko:K03790	-	-	-	-	ko00000,ko01000,ko03009	-	-	-	Acetyltransf_3
BYD3_k127_6564058_7	929556.Solca_2103	3.861e-11	64.0	COG1357@1|root,COG1357@2|Bacteria,4NQ3B@976|Bacteroidetes,1ISGY@117747|Sphingobacteriia	976|Bacteroidetes	S	PFAM Pentapeptide repeats (8 copies)	-	-	-	-	-	-	-	-	-	-	-	-	Pentapeptide,Pentapeptide_4
BYD3_k127_6564058_3	266748.HY04_02320	4.935e-58	205.0	COG1357@1|root,COG1357@2|Bacteria,4NQ3B@976|Bacteroidetes,1I2VH@117743|Flavobacteriia,3ZNRA@59732|Chryseobacterium	976|Bacteroidetes	S	Pentapeptide repeats (9 copies)	-	-	-	-	-	-	-	-	-	-	-	-	Pentapeptide,Pentapeptide_4
BYD3_k127_6564058_2	1123248.KB893359_gene2189	1.326e-118	388.0	COG0657@1|root,COG2755@1|root,COG0657@2|Bacteria,COG2755@2|Bacteria,4NHBT@976|Bacteroidetes,1ISWB@117747|Sphingobacteriia	976|Bacteroidetes	E	GDSL-like Lipase/Acylhydrolase	-	-	-	-	-	-	-	-	-	-	-	-	Lipase_GDSL_2
BYD3_k127_6564058_6	1122605.KB893648_gene3540	2.932e-19	94.0	COG4319@1|root,COG4319@2|Bacteria	2|Bacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	DUF4440,SnoaL_2
BYD3_k127_656940_16	1121904.ARBP01000009_gene4352	1.448e-09	60.0	COG3682@1|root,COG3682@2|Bacteria,4NT4V@976|Bacteroidetes,47R2Y@768503|Cytophagia	976|Bacteroidetes	K	Penicillinase repressor	-	-	-	-	-	-	-	-	-	-	-	-	Penicillinase_R
BYD3_k127_656940_11	1488328.JMCL01000101_gene3895	1.31e-33	133.0	2CBFC@1|root,32RYI@2|Bacteria,1N0T4@1224|Proteobacteria	1224|Proteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_656940_12	1121481.AUAS01000004_gene1369	1.72e-32	131.0	2CBAE@1|root,31814@2|Bacteria	2|Bacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_656940_15	1313301.AUGC01000001_gene1691	9.046e-22	103.0	COG3047@1|root,COG3047@2|Bacteria	2|Bacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	DUF3943,OMP_b-brl,OMP_b-brl_2
BYD3_k127_656940_4	1340493.JNIF01000003_gene1832	6.716e-118	389.0	COG0620@1|root,COG0620@2|Bacteria	2|Bacteria	E	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation	-	-	2.1.1.14	ko:K00549	ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230	M00017	R04405,R09365	RC00035,RC00113,RC01241	ko00000,ko00001,ko00002,ko01000	-	-	-	Meth_synt_2
BYD3_k127_656940_9	880071.Fleli_0987	2.613e-40	154.0	COG3205@1|root,COG3205@2|Bacteria,4NV6E@976|Bacteroidetes,47SXF@768503|Cytophagia	976|Bacteroidetes	S	Predicted membrane protein (DUF2061)	-	-	-	-	-	-	-	-	-	-	-	-	DUF2061
BYD3_k127_656940_0	1191523.MROS_0977	3.395e-144	470.0	COG4225@1|root,COG4225@2|Bacteria	2|Bacteria	S	unsaturated chondroitin disaccharide hydrolase activity	yteR	-	-	-	-	-	-	-	-	-	-	-	DUF4861,Glyco_hydro_88
BYD3_k127_656940_14	1288963.ADIS_0405	2.366e-29	120.0	COG2827@1|root,COG2827@2|Bacteria,4NUYX@976|Bacteroidetes,47RSS@768503|Cytophagia	976|Bacteroidetes	L	GIY-YIG catalytic domain	-	-	-	ko:K07461	-	-	-	-	ko00000	-	-	-	GIY-YIG
BYD3_k127_656940_6	1121904.ARBP01000012_gene1185	1.095e-65	237.0	28I9R@1|root,2Z8CE@2|Bacteria,4NNRK@976|Bacteroidetes,47XS5@768503|Cytophagia	976|Bacteroidetes	S	Lipid A 3-O-deacylase (PagL)	-	-	-	-	-	-	-	-	-	-	-	-	PagL
BYD3_k127_656940_3	1168034.FH5T_15345	9.772e-119	393.0	COG4299@1|root,COG4299@2|Bacteria,4NJZJ@976|Bacteroidetes,2FNJ9@200643|Bacteroidia	976|Bacteroidetes	S	Domain of unknown function (DUF5009)	-	-	-	-	-	-	-	-	-	-	-	-	DUF5009
BYD3_k127_656940_5	153721.MYP_3597	4.431e-97	327.0	COG0697@1|root,COG0697@2|Bacteria,4NM5K@976|Bacteroidetes,47TMU@768503|Cytophagia	976|Bacteroidetes	EG	EamA-like transporter family	-	-	-	-	-	-	-	-	-	-	-	-	EamA
BYD3_k127_656940_7	760192.Halhy_3575	1.11e-49	183.0	COG4993@1|root,COG4993@2|Bacteria,4NFK0@976|Bacteroidetes,1IQUR@117747|Sphingobacteriia	976|Bacteroidetes	C	Pyrrolo-quinoline quinone	-	-	1.1.5.2	ko:K00117	ko00030,ko01100,ko01110,ko01130,map00030,map01100,map01110,map01130	-	R06620	RC00066	ko00000,ko00001,ko01000	-	-	-	Cytochrome_CBB3,PQQ,PQQ_2
BYD3_k127_656940_2	1123276.KB893268_gene4856	2.514e-127	423.0	COG4993@1|root,COG4993@2|Bacteria,4NFK0@976|Bacteroidetes,47N4C@768503|Cytophagia	976|Bacteroidetes	C	PQQ-like domain	-	-	1.1.5.2	ko:K00117	ko00030,ko01100,ko01110,ko01130,map00030,map01100,map01110,map01130	-	R06620	RC00066	ko00000,ko00001,ko01000	-	-	-	Cytochrome_CBB3,PQQ,PQQ_2
BYD3_k127_656940_1	1046627.BZARG_408	6.945e-141	461.0	COG1696@1|root,COG1696@2|Bacteria,4NFK5@976|Bacteroidetes,1HWM1@117743|Flavobacteriia	976|Bacteroidetes	M	Membrane protein involved in D-alanine export	algI	-	-	ko:K19294	-	-	-	-	ko00000	-	-	-	MBOAT
BYD3_k127_656940_13	1121403.AUCV01000020_gene3101	4.745e-32	143.0	COG0457@1|root,COG0457@2|Bacteria,1RIYN@1224|Proteobacteria,42T31@68525|delta/epsilon subdivisions,2WPYY@28221|Deltaproteobacteria,2MKKV@213118|Desulfobacterales	28221|Deltaproteobacteria	S	SGNH hydrolase-like domain, acetyltransferase AlgX	-	-	-	-	-	-	-	-	-	-	-	-	ALGX
BYD3_k127_6574654_2	1123242.JH636434_gene3379	5.839e-16	82.0	COG1305@1|root,COG1305@2|Bacteria,2IYAD@203682|Planctomycetes	203682|Planctomycetes	E	transglutaminase-like	-	-	-	-	-	-	-	-	-	-	-	-	Bact_transglu_N,Transglut_core
BYD3_k127_6574654_1	929703.KE386492_gene4406	6.041e-232	744.0	COG2307@1|root,COG2308@1|root,COG2307@2|Bacteria,COG2308@2|Bacteria,4NEC4@976|Bacteroidetes,47M1P@768503|Cytophagia	976|Bacteroidetes	S	A predicted alpha-helical domain with a conserved ER motif.	-	-	-	-	-	-	-	-	-	-	-	-	Alpha-E,CP_ATPgrasp_2
BYD3_k127_6574654_0	153721.MYP_547	1.482e-256	799.0	COG1305@1|root,COG4196@1|root,COG1305@2|Bacteria,COG4196@2|Bacteria,4NIPS@976|Bacteroidetes,47M8S@768503|Cytophagia	976|Bacteroidetes	E	Putative amidoligase enzyme (DUF2126)	-	-	-	-	-	-	-	-	-	-	-	-	Bact_transglu_N,DUF2126,Transglut_core
BYD3_k127_6587467_1	1237149.C900_00798	4.128e-112	373.0	COG0770@1|root,COG0787@1|root,COG0770@2|Bacteria,COG0787@2|Bacteria,4NEXM@976|Bacteroidetes,47JKP@768503|Cytophagia	976|Bacteroidetes	M	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids	alr	-	5.1.1.1,6.3.2.10	ko:K01775,ko:K01929	ko00300,ko00473,ko00550,ko01100,ko01502,map00300,map00473,map00550,map01100,map01502	-	R00401,R04573,R04617	RC00064,RC00141,RC00285	ko00000,ko00001,ko01000,ko01011	-	-	-	Ala_racemase_C,Ala_racemase_N,Mur_ligase,Mur_ligase_M
BYD3_k127_6587467_2	1128421.JAGA01000003_gene3410	6.941e-43	159.0	COG0073@1|root,COG0073@2|Bacteria,2NPKM@2323|unclassified Bacteria	2|Bacteria	J	Putative tRNA binding domain	csaA	GO:0000049,GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0017101,GO:0017102,GO:0019538,GO:0019752,GO:0032991,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576	6.1.1.10,6.1.1.20,6.1.1.6	ko:K01874,ko:K01890,ko:K04566,ko:K06878	ko00450,ko00970,map00450,map00970	M00359,M00360	R03658,R03659,R03660,R04773	RC00055,RC00523	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	-	-	-	tRNA_bind
BYD3_k127_6587467_0	880070.Cycma_4549	4.034e-209	669.0	COG1629@1|root,COG4771@2|Bacteria,4NFQD@976|Bacteroidetes,47JHA@768503|Cytophagia	976|Bacteroidetes	P	TonB-dependent receptor	-	-	-	ko:K02014	-	-	-	-	ko00000,ko02000	1.B.14	-	-	CarbopepD_reg_2,Plug,TonB_dep_Rec
BYD3_k127_6587995_7	1408813.AYMG01000008_gene3934	7.607e-34	139.0	2E047@1|root,2ZJQK@2|Bacteria,4P6XA@976|Bacteroidetes	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_6587995_1	1346330.M472_13750	6.786e-187	589.0	COG0057@1|root,COG0057@2|Bacteria,4NEMF@976|Bacteroidetes,1IPZW@117747|Sphingobacteriia	976|Bacteroidetes	G	Belongs to the glyceraldehyde-3-phosphate dehydrogenase family	gap	-	1.2.1.12	ko:K00134	ko00010,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04066,ko05010,map00010,map00710,map01100,map01110,map01120,map01130,map01200,map01230,map04066,map05010	M00001,M00002,M00003,M00165,M00166,M00308,M00552	R01061	RC00149	ko00000,ko00001,ko00002,ko01000,ko04131,ko04147	-	-	-	Gp_dh_C,Gp_dh_N
BYD3_k127_6587995_3	1237149.C900_05163	1.859e-61	227.0	COG0484@1|root,COG4783@1|root,COG0484@2|Bacteria,COG4783@2|Bacteria	2|Bacteria	L	chaperone-mediated protein folding	-	-	-	ko:K21010	ko02025,map02025	-	-	-	ko00000,ko00001	-	-	-	DUF560,DnaJ,Dynamin_N,Peptidase_M48,TPR_19,TPR_8
BYD3_k127_6587995_4	1237149.C900_00590	7.234e-54	194.0	COG4319@1|root,COG4319@2|Bacteria,4NNSF@976|Bacteroidetes	976|Bacteroidetes	S	SnoaL-like domain	-	-	-	-	-	-	-	-	-	-	-	-	SnoaL_3
BYD3_k127_6587995_0	1237149.C900_00593	1.31e-189	598.0	COG4992@1|root,COG4992@2|Bacteria,4NFMC@976|Bacteroidetes,47JJU@768503|Cytophagia	976|Bacteroidetes	E	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family	argD	-	2.6.1.11,2.6.1.17	ko:K00821	ko00220,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00220,map00300,map01100,map01110,map01120,map01130,map01210,map01230	M00016,M00028,M00845	R02283,R04475	RC00006,RC00062	ko00000,ko00001,ko00002,ko01000,ko01007	-	-	-	Aminotran_3
BYD3_k127_6587995_2	1434325.AZQN01000005_gene3653	1.019e-63	233.0	COG0628@1|root,COG0628@2|Bacteria,4NFHZ@976|Bacteroidetes,47NU0@768503|Cytophagia	976|Bacteroidetes	S	AI-2E family transporter	-	-	-	-	-	-	-	-	-	-	-	-	AI-2E_transport
BYD3_k127_6587995_5	153721.MYP_4666	7.059e-41	151.0	COG5405@1|root,COG5405@2|Bacteria,4NHZ8@976|Bacteroidetes,47MJS@768503|Cytophagia	976|Bacteroidetes	O	Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery	hslV	-	3.4.25.2	ko:K01419	-	-	-	-	ko00000,ko01000,ko01002	-	-	-	Proteasome
BYD3_k127_6598969_2	1237149.C900_04442	9.119e-143	458.0	COG0653@1|root,COG0653@2|Bacteria,4NF7C@976|Bacteroidetes,47JTE@768503|Cytophagia	976|Bacteroidetes	U	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane	secA	GO:0000166,GO:0003674,GO:0003824,GO:0005215,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005887,GO:0006810,GO:0008104,GO:0008144,GO:0008150,GO:0008320,GO:0008565,GO:0015031,GO:0015399,GO:0015405,GO:0015440,GO:0015450,GO:0015462,GO:0015833,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0022804,GO:0022857,GO:0022884,GO:0030554,GO:0031224,GO:0031226,GO:0031522,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0033036,GO:0033220,GO:0035639,GO:0036094,GO:0042623,GO:0042626,GO:0042886,GO:0042887,GO:0043167,GO:0043168,GO:0043492,GO:0043952,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0045184,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071806,GO:0071944,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:1904680	-	ko:K03070	ko02024,ko03060,ko03070,map02024,map03060,map03070	M00335	-	-	ko00000,ko00001,ko00002,ko02044	3.A.5.1,3.A.5.10,3.A.5.2,3.A.5.4	-	-	Helicase_C,SEC-C,SecA_DEAD,SecA_PP_bind,SecA_SW
BYD3_k127_6598969_3	1237149.C900_04443	3.15e-31	128.0	2EJD3@1|root,33D44@2|Bacteria,4NP3M@976|Bacteroidetes,47PW7@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	SPOR
BYD3_k127_6598969_0	760192.Halhy_6229	6.722e-296	919.0	COG2133@1|root,COG4654@1|root,COG2133@2|Bacteria,COG4654@2|Bacteria,4NEMM@976|Bacteroidetes,1IR5I@117747|Sphingobacteriia	976|Bacteroidetes	C	PFAM Cytochrome c, class I	-	-	-	-	-	-	-	-	-	-	-	-	Cytochrom_C
BYD3_k127_6598969_1	760192.Halhy_6230	3.538e-164	530.0	COG2010@1|root,COG2133@1|root,COG2010@2|Bacteria,COG2133@2|Bacteria,4NEJ0@976|Bacteroidetes,1IS7J@117747|Sphingobacteriia	976|Bacteroidetes	CG	Domain of Unknown Function (DUF1080)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1080,PA14
BYD3_k127_6618397_2	1121373.KB903643_gene3543	2.844e-96	319.0	COG0846@1|root,COG0846@2|Bacteria,4NE9Q@976|Bacteroidetes,47KMH@768503|Cytophagia	976|Bacteroidetes	K	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form	cobB	-	-	ko:K12410	-	-	-	-	ko00000,ko01000	-	-	-	SIR2
BYD3_k127_6618397_1	945713.IALB_2577	4.925e-145	477.0	COG4935@1|root,COG4935@2|Bacteria	2|Bacteria	O	Belongs to the peptidase S8 family	-	-	-	-	-	-	-	-	-	-	-	-	CHB_HEX_C_1,CotH,HYR,LTD,P_proprotein
BYD3_k127_6618397_3	1185876.BN8_06593	1.012e-78	271.0	COG1521@1|root,COG1521@2|Bacteria,4NE9E@976|Bacteroidetes,47K5B@768503|Cytophagia	976|Bacteroidetes	H	Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis	coaX	-	2.7.1.33	ko:K03525	ko00770,ko01100,map00770,map01100	M00120	R02971,R03018,R04391	RC00002,RC00017	ko00000,ko00001,ko00002,ko01000	-	-	-	Pan_kinase
BYD3_k127_6618397_4	1237149.C900_00402	2.195e-53	199.0	COG0596@1|root,COG0596@2|Bacteria,4PNPN@976|Bacteroidetes,47XAU@768503|Cytophagia	976|Bacteroidetes	S	Ndr family	-	-	3.4.11.5	ko:K01259	ko00330,map00330	-	R00135	-	ko00000,ko00001,ko01000,ko01002	-	-	-	Abhydrolase_1
BYD3_k127_6618397_5	1121904.ARBP01000005_gene4813	1.656e-14	77.0	2E8WY@1|root,33373@2|Bacteria,4NV40@976|Bacteroidetes,47RXW@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_6618397_0	1121904.ARBP01000004_gene1024	1.628e-272	863.0	COG2366@1|root,COG2366@2|Bacteria,4NEIX@976|Bacteroidetes,47JRC@768503|Cytophagia	976|Bacteroidetes	S	PFAM peptidase S45 penicillin amidase	-	-	3.5.1.11	ko:K01434	ko00311,ko01130,map00311,map01130	-	R02170	RC00166,RC00328	ko00000,ko00001,ko01000,ko01002	-	-	-	Penicil_amidase
BYD3_k127_662021_2	1453505.JASY01000002_gene2949	3.575e-49	192.0	28J4T@1|root,2Z90P@2|Bacteria,4NHUC@976|Bacteroidetes,1HZE4@117743|Flavobacteriia,2NUFS@237|Flavobacterium	976|Bacteroidetes	S	Domain of unknown function (DUF4270)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4270
BYD3_k127_662021_5	525257.HMPREF0204_10650	4.901e-15	83.0	2E9C0@1|root,333JQ@2|Bacteria,4NVAR@976|Bacteroidetes,1I723@117743|Flavobacteriia,3ZSAX@59732|Chryseobacterium	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_662021_3	269798.CHU_1356	6.528e-35	138.0	COG0784@1|root,COG0784@2|Bacteria	2|Bacteria	T	Response regulator, receiver	cqsS	GO:0000155,GO:0000156,GO:0000160,GO:0003674,GO:0003824,GO:0004672,GO:0004673,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0007154,GO:0007165,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0016775,GO:0018106,GO:0018193,GO:0018202,GO:0019538,GO:0023014,GO:0023052,GO:0035556,GO:0036211,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0060089,GO:0065007,GO:0071704,GO:0140096,GO:1901564	2.7.13.3	ko:K03413,ko:K10916	ko02020,ko02024,ko02030,ko05111,map02020,map02024,map02030,map05111	M00506,M00513	-	-	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022,ko02035	-	-	-	HATPase_c,HisKA,Hpt,Response_reg
BYD3_k127_662021_0	269798.CHU_1355	1.302e-171	546.0	COG4251@1|root,COG4251@2|Bacteria,4NFC3@976|Bacteroidetes,47TF8@768503|Cytophagia	976|Bacteroidetes	T	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)	-	-	-	-	-	-	-	-	-	-	-	-	HATPase_c,HisKA,PAS_3,PAS_9
BYD3_k127_662021_1	929556.Solca_0266	8.019e-159	529.0	COG0577@1|root,COG0577@2|Bacteria,4NDUK@976|Bacteroidetes,1IW4Z@117747|Sphingobacteriia	976|Bacteroidetes	V	MacB-like periplasmic core domain	-	-	-	ko:K02004	-	M00258	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	FtsX,MacB_PCD
BYD3_k127_662021_4	1121904.ARBP01000010_gene2392	1.872e-29	123.0	COG0577@1|root,COG0577@2|Bacteria,4NDUK@976|Bacteroidetes,47JJN@768503|Cytophagia	976|Bacteroidetes	V	FtsX-like permease family	-	-	-	ko:K02004	-	M00258	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	FtsX,MacB_PCD
BYD3_k127_66216_0	1267535.KB906767_gene4768	1.273e-157	512.0	2DBP2@1|root,2ZA71@2|Bacteria	2|Bacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_66216_1	643867.Ftrac_0364	5.12e-125	412.0	COG0644@1|root,COG0644@2|Bacteria,4NKR8@976|Bacteroidetes,47SE4@768503|Cytophagia	976|Bacteroidetes	C	TIGRFAM geranylgeranyl reductase family	-	-	1.3.99.38	ko:K21401	-	-	-	-	ko00000,ko01000	-	-	-	FAD_binding_3,Trp_halogenase
BYD3_k127_66216_2	203275.BFO_3146	1.954e-36	143.0	COG1082@1|root,COG2133@1|root,COG1082@2|Bacteria,COG2133@2|Bacteria,4NFKF@976|Bacteroidetes,2FRR2@200643|Bacteroidia,22XIX@171551|Porphyromonadaceae	976|Bacteroidetes	G	Domain of Unknown Function (DUF1080)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1080
BYD3_k127_6639074_3	1121889.AUDM01000008_gene762	1.32e-05	49.0	2C852@1|root,32YB2@2|Bacteria,4NM63@976|Bacteroidetes,1I1C4@117743|Flavobacteriia,2NUR7@237|Flavobacterium	976|Bacteroidetes	S	Domain of unknown function (DUF4136)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4136
BYD3_k127_6639074_2	1492737.FEM08_31240	1.789e-33	139.0	2AECJ@1|root,31473@2|Bacteria,4NZDM@976|Bacteroidetes,1ICQ6@117743|Flavobacteriia,2NU6A@237|Flavobacterium	976|Bacteroidetes	S	Ion channel	-	-	-	-	-	-	-	-	-	-	-	-	Ion_trans_2
BYD3_k127_6639074_1	1121912.AUHD01000005_gene1843	2.371e-110	368.0	COG0729@1|root,COG0729@2|Bacteria,4PPA8@976|Bacteroidetes	976|Bacteroidetes	M	Surface antigen	-	-	-	-	-	-	-	-	-	-	-	-	Bac_surface_Ag
BYD3_k127_6639074_0	1239962.C943_01003	2.318e-179	569.0	COG1538@1|root,COG1538@2|Bacteria,4NDZK@976|Bacteroidetes,47KN4@768503|Cytophagia	976|Bacteroidetes	MU	TIGRFAM efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family	-	-	-	ko:K18139,ko:K18300	ko01501,ko02024,map01501,map02024	M00641,M00642,M00643,M00647,M00718,M00768,M00822	-	-	ko00000,ko00001,ko00002,ko01504,ko02000	1.B.17,2.A.6.2	-	-	OEP
BYD3_k127_6651133_6	1004149.AFOE01000038_gene956	1.402e-25	110.0	COG2318@1|root,COG2318@2|Bacteria,4NS3A@976|Bacteroidetes,1I2YI@117743|Flavobacteriia	976|Bacteroidetes	S	DinB family	-	-	-	-	-	-	-	-	-	-	-	-	DinB,DinB_2
BYD3_k127_6651133_7	760192.Halhy_2093	5.882e-19	88.0	2EMYX@1|root,33FM2@2|Bacteria,4NY90@976|Bacteroidetes,1IZI6@117747|Sphingobacteriia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_6651133_0	1189612.A33Q_1408	1.543e-234	751.0	COG0577@1|root,COG0577@2|Bacteria,4NDUK@976|Bacteroidetes,47JJN@768503|Cytophagia	976|Bacteroidetes	V	FtsX-like permease family	-	-	-	ko:K02004	-	M00258	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	FtsX,MacB_PCD
BYD3_k127_6651133_4	1233950.IW22_09075	3.33e-54	192.0	COG3602@1|root,COG3602@2|Bacteria,4NQ4T@976|Bacteroidetes,1I2YS@117743|Flavobacteriia,3ZS0W@59732|Chryseobacterium	976|Bacteroidetes	S	ACT domain	-	-	-	ko:K09964	-	-	-	-	ko00000	-	-	-	ACT_3,ACT_7
BYD3_k127_6651133_5	1123242.JH636434_gene4986	1.565e-42	171.0	COG3356@1|root,COG3356@2|Bacteria,2J2KA@203682|Planctomycetes	203682|Planctomycetes	S	PFAM Neutral alkaline nonlysosomal ceramidase	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_6651133_3	929562.Emtol_1586	1.418e-62	219.0	2DMP1@1|root,32SS8@2|Bacteria,4NQY9@976|Bacteroidetes,47QNE@768503|Cytophagia	976|Bacteroidetes	S	Protein of unknown function (DUF3237)	-	-	-	-	-	-	-	-	-	-	-	-	DUF3237
BYD3_k127_6651133_2	1341155.FSS13T_15520	3.4e-64	228.0	COG0730@1|root,COG0730@2|Bacteria,4NFWP@976|Bacteroidetes,1HWSW@117743|Flavobacteriia,2NSXA@237|Flavobacterium	976|Bacteroidetes	S	membrane transporter protein	-	-	-	ko:K07090	-	-	-	-	ko00000	-	-	-	TauE
BYD3_k127_6651133_1	1250232.JQNJ01000001_gene2672	2.412e-77	262.0	COG1416@1|root,COG1416@2|Bacteria,4NH85@976|Bacteroidetes	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_6660354_1	1048983.EL17_20455	4.086e-174	561.0	COG0249@1|root,COG0249@2|Bacteria,4NGEA@976|Bacteroidetes,47NI1@768503|Cytophagia	976|Bacteroidetes	L	ATPase domain of DNA mismatch repair MUTS family	-	-	-	ko:K03555	ko03430,map03430	-	-	-	ko00000,ko00001,ko03400	-	-	-	MutS_V
BYD3_k127_6660354_0	1123277.KB893206_gene3445	1.427e-290	908.0	COG3525@1|root,COG3525@2|Bacteria,4NH5U@976|Bacteroidetes	976|Bacteroidetes	G	domain, Protein	-	-	-	-	-	-	-	-	-	-	-	-	Glyco_hydro_20b
BYD3_k127_6660354_2	1123277.KB893174_gene5902	4.024e-48	174.0	COG1695@1|root,COG1695@2|Bacteria,4P3EW@976|Bacteroidetes,47V29@768503|Cytophagia	976|Bacteroidetes	K	PFAM transcriptional regulator PadR family protein	-	-	-	-	-	-	-	-	-	-	-	-	PadR
BYD3_k127_6660354_4	1123277.KB893174_gene5903	4.992e-11	67.0	COG0577@1|root,COG0577@2|Bacteria,4NDW7@976|Bacteroidetes,47N35@768503|Cytophagia	976|Bacteroidetes	V	FtsX-like permease family	-	-	-	-	-	-	-	-	-	-	-	-	FtsX,MacB_PCD
BYD3_k127_6670118_1	1121105.ATXL01000005_gene153	1.301e-16	80.0	COG0381@1|root,COG0381@2|Bacteria,1TQZT@1239|Firmicutes,4HBI3@91061|Bacilli,4AZEE@81852|Enterococcaceae	91061|Bacilli	G	UDP-N-acetylglucosamine 2-epimerase	mnaA	-	5.1.3.14	ko:K01791	ko00520,ko01100,ko05111,map00520,map01100,map05111	M00362	R00420	RC00290	ko00000,ko00001,ko00002,ko01000,ko01005	-	-	-	Epimerase_2
BYD3_k127_6670118_2	926554.KI912670_gene2045	3.833e-15	90.0	COG2199@1|root,COG3706@2|Bacteria	2|Bacteria	T	GGDEF domain	-	-	-	-	-	-	-	-	-	-	-	-	GGDEF,HisKA_7TM,PAS,PAS_4,PAS_8
BYD3_k127_6670118_3	765420.OSCT_2727	5.225e-06	60.0	COG1716@1|root,COG1716@2|Bacteria,2G9CS@200795|Chloroflexi,375YC@32061|Chloroflexia	32061|Chloroflexia	T	PFAM Forkhead-associated protein	-	-	-	-	-	-	-	-	-	-	-	-	FHA
BYD3_k127_6670118_0	292459.STH1677	3.549e-23	115.0	COG1215@1|root,COG1215@2|Bacteria,1UFC7@1239|Firmicutes,24AVF@186801|Clostridia	186801|Clostridia	M	Glycosyl transferase family group 2	-	-	-	-	-	-	-	-	-	-	-	-	Glyco_trans_2_3
BYD3_k127_6704129_4	746697.Aeqsu_2760	1.106e-07	62.0	2BTQM@1|root,32NXS@2|Bacteria,4PFK3@976|Bacteroidetes,1I7AQ@117743|Flavobacteriia	976|Bacteroidetes	S	TIR domain	-	-	-	-	-	-	-	-	-	-	-	-	TIR_2
BYD3_k127_6704129_0	1123508.JH636442_gene4074	2.267e-147	474.0	COG2055@1|root,COG2055@2|Bacteria,2J36Z@203682|Planctomycetes	203682|Planctomycetes	C	Malate/L-lactate dehydrogenase	-	-	-	-	-	-	-	-	-	-	-	-	Ldh_2
BYD3_k127_6704129_2	1121875.KB907549_gene1746	7.756e-68	234.0	COG0824@1|root,COG0824@2|Bacteria,4NU9K@976|Bacteroidetes,1I4S6@117743|Flavobacteriia	976|Bacteroidetes	S	Thioesterase-like superfamily	-	-	-	-	-	-	-	-	-	-	-	-	4HBT_2
BYD3_k127_6704129_1	649349.Lbys_2372	1.106e-90	303.0	COG0564@1|root,COG0564@2|Bacteria,4NFS8@976|Bacteroidetes,47KV5@768503|Cytophagia	976|Bacteroidetes	J	Pseudouridine synthase	rluC	-	5.4.99.23,5.4.99.28,5.4.99.29	ko:K06177,ko:K06180	-	-	-	-	ko00000,ko01000,ko03009,ko03016	-	-	-	PseudoU_synth_2
BYD3_k127_6704129_3	1120965.AUBV01000008_gene2070	2.584e-28	116.0	2CKAK@1|root,32SBZ@2|Bacteria,4NSJ2@976|Bacteroidetes,47R6B@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_6710788_3	485918.Cpin_6846	8.145e-93	321.0	COG0842@1|root,COG0842@2|Bacteria,4NGFA@976|Bacteroidetes,1ISKA@117747|Sphingobacteriia	976|Bacteroidetes	V	ABC-2 type transporter	-	-	-	ko:K01992	-	M00254	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	ABC2_membrane_3
BYD3_k127_6710788_4	485918.Cpin_6847	3.983e-81	277.0	COG1131@1|root,COG1131@2|Bacteria,4NFW9@976|Bacteroidetes,1IRV1@117747|Sphingobacteriia	976|Bacteroidetes	V	ATPases associated with a variety of cellular activities	-	-	-	ko:K01990	-	M00254	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	ABC_tran
BYD3_k127_6710788_2	485918.Cpin_6848	3.19e-125	409.0	COG4990@1|root,COG4990@2|Bacteria,4NFZX@976|Bacteroidetes,1IPPX@117747|Sphingobacteriia	976|Bacteroidetes	S	Domain of unknown function (DUF4872)	-	-	-	-	-	-	-	-	-	-	-	-	BtrH_N,DUF4872
BYD3_k127_6710788_6	485918.Cpin_6849	2.324e-35	139.0	2CE7N@1|root,30Q80@2|Bacteria,4NNKP@976|Bacteroidetes,1IT9G@117747|Sphingobacteriia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_6710788_0	485918.Cpin_6850	4.88e-140	454.0	COG0332@1|root,COG0332@2|Bacteria,4NE5Q@976|Bacteroidetes,1IPV9@117747|Sphingobacteriia	976|Bacteroidetes	I	PFAM 3-Oxoacyl- acyl-carrier-protein (ACP) synthase III	darB	-	2.3.1.180	ko:K00648	ko00061,ko01100,ko01212,map00061,map01100,map01212	M00082,M00083	R10707	RC00004,RC02729,RC02888	ko00000,ko00001,ko00002,ko01000,ko01004	-	-	-	ACP_syn_III_C,Thiolase_N,ketoacyl-synt
BYD3_k127_6710788_5	485918.Cpin_6851	3.193e-74	261.0	COG0716@1|root,COG0716@2|Bacteria,4NHTB@976|Bacteroidetes,1ISM3@117747|Sphingobacteriia	976|Bacteroidetes	C	Dialkylrecorsinol condensing enzyme DarA	darA	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_6710788_1	1237149.C900_03744	1.132e-136	447.0	COG0527@1|root,COG0527@2|Bacteria,4NF0M@976|Bacteroidetes,47JAD@768503|Cytophagia	976|Bacteroidetes	E	Belongs to the aspartokinase family	lysC	-	2.7.2.4	ko:K00928	ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01210,map01230	M00016,M00017,M00018,M00033,M00525,M00526,M00527	R00480	RC00002,RC00043	ko00000,ko00001,ko00002,ko01000	-	-	-	AA_kinase
BYD3_k127_6710788_7	1237149.C900_03745	9.048e-24	102.0	COG0158@1|root,COG0158@2|Bacteria,4NG06@976|Bacteroidetes,47KNQ@768503|Cytophagia	976|Bacteroidetes	G	D-fructose-1,6-bisphosphate 1-phosphohydrolase class 1	fbp	-	3.1.3.11	ko:K03841	ko00010,ko00030,ko00051,ko00680,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko04152,ko04910,map00010,map00030,map00051,map00680,map00710,map01100,map01110,map01120,map01130,map01200,map04152,map04910	M00003,M00165,M00167,M00344	R00762,R04780	RC00017	ko00000,ko00001,ko00002,ko01000,ko04147	-	-	-	FBPase
BYD3_k127_6728114_0	471854.Dfer_3705	1.343e-62	227.0	COG3712@1|root,COG3712@2|Bacteria,4NNI5@976|Bacteroidetes,47Q6H@768503|Cytophagia	976|Bacteroidetes	PT	PFAM FecR protein	-	-	-	-	-	-	-	-	-	-	-	-	DUF4974,FecR
BYD3_k127_6728114_1	1123277.KB893217_gene4616	3.42e-45	172.0	COG1629@1|root,COG1629@2|Bacteria,4NDXS@976|Bacteroidetes,47K5R@768503|Cytophagia	976|Bacteroidetes	P	TIGRFAM TonB-dependent outer membrane receptor, SusC RagA subfamily, signature region	-	-	-	-	-	-	-	-	-	-	-	-	CarbopepD_reg_2,Plug,TonB_dep_Rec
BYD3_k127_6742016_4	1189619.pgond44_14078	1.532e-111	366.0	COG4191@1|root,COG4191@2|Bacteria,4NEJX@976|Bacteroidetes,1I0JH@117743|Flavobacteriia	976|Bacteroidetes	T	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase	-	-	-	-	-	-	-	-	-	-	-	-	7TMR-DISMED2,7TMR-DISM_7TM,GAF_2,HATPase_c,HisKA
BYD3_k127_6742016_1	1454007.JAUG01000006_gene400	3.872e-145	469.0	COG1373@1|root,COG1373@2|Bacteria,4NE39@976|Bacteroidetes,1IV47@117747|Sphingobacteriia	976|Bacteroidetes	S	Domain of unknown function (DUF4143)	-	-	-	ko:K07133	-	-	-	-	ko00000	-	-	-	AAA_14,DUF4143
BYD3_k127_6742016_5	1121875.KB907550_gene639	1.669e-07	55.0	COG4191@1|root,COG4191@2|Bacteria,4NEJX@976|Bacteroidetes,1I0JH@117743|Flavobacteriia	976|Bacteroidetes	T	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase	-	-	-	-	-	-	-	-	-	-	-	-	7TMR-DISMED2,7TMR-DISM_7TM,HATPase_c,HisKA,SnoaL_3
BYD3_k127_6742016_3	1123248.KB893350_gene2907	2.664e-134	454.0	COG4191@1|root,COG4191@2|Bacteria,4NEJX@976|Bacteroidetes,1IVE0@117747|Sphingobacteriia	976|Bacteroidetes	T	His Kinase A (phosphoacceptor) domain	-	-	-	-	-	-	-	-	-	-	-	-	HATPase_c,HisKA,TPR_12,TPR_8
BYD3_k127_6742016_2	1123248.KB893326_gene1521	5.677e-145	482.0	COG4191@1|root,COG4191@2|Bacteria,4NEJX@976|Bacteroidetes,1IQBI@117747|Sphingobacteriia	976|Bacteroidetes	T	Signal transduction histidine kinase, subgroup 1, dimerisation phosphoacceptor	-	-	-	-	-	-	-	-	-	-	-	-	HATPase_c,HisKA,TPR_12
BYD3_k127_6742016_0	1123248.KB893350_gene2905	2.764e-153	507.0	COG4191@1|root,COG4191@2|Bacteria,4NEJX@976|Bacteroidetes	976|Bacteroidetes	T	Histidine kinase	-	-	-	-	-	-	-	-	-	-	-	-	HATPase_c,HisKA,TPR_12,TPR_8
BYD3_k127_6755597_4	1041139.KB902757_gene3629	2.096e-11	68.0	COG4638@1|root,COG4638@2|Bacteria,1MWXW@1224|Proteobacteria,2TSJ5@28211|Alphaproteobacteria,4B9CI@82115|Rhizobiaceae	28211|Alphaproteobacteria	P	Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit	antA	-	-	ko:K00479	-	-	-	-	ko00000	-	-	-	Rieske,Ring_hydroxyl_A
BYD3_k127_6755597_3	755732.Fluta_0463	4.49e-72	259.0	COG0642@1|root,COG0642@2|Bacteria,4NEW4@976|Bacteroidetes,1HZ62@117743|Flavobacteriia,2PAZJ@246874|Cryomorphaceae	976|Bacteroidetes	T	His Kinase A (phosphoacceptor) domain	-	-	-	-	-	-	-	-	-	-	-	-	HATPase_c,HisKA
BYD3_k127_6755597_2	1233950.IW22_04145	5.881e-85	290.0	COG0745@1|root,COG0745@2|Bacteria,4NGVV@976|Bacteroidetes,1HZVN@117743|Flavobacteriia,3ZU7K@59732|Chryseobacterium	976|Bacteroidetes	KT	Transcriptional regulatory protein, C terminal	-	-	-	-	-	-	-	-	-	-	-	-	Response_reg,Trans_reg_C
BYD3_k127_6755597_1	1205908.AKXW01000108_gene1200	6.155e-87	304.0	COG4784@1|root,COG4784@2|Bacteria,1QTT7@1224|Proteobacteria,1RSQ1@1236|Gammaproteobacteria,1XWGA@135623|Vibrionales	135623|Vibrionales	S	Peptidase family M48	-	-	-	-	-	-	-	-	-	-	-	-	Peptidase_M48
BYD3_k127_6755597_0	1270196.JCKI01000005_gene3020	2.321e-112	370.0	COG3781@1|root,COG3781@2|Bacteria,4NIC7@976|Bacteroidetes,1IPZA@117747|Sphingobacteriia	976|Bacteroidetes	S	membrane	-	-	-	ko:K08994	-	-	-	-	ko00000,ko02000	1.A.46.2	-	-	Bestrophin
BYD3_k127_6755597_5	1434325.AZQN01000006_gene3245	0.0003284	46.0	COG2827@1|root,COG2827@2|Bacteria,4NUW1@976|Bacteroidetes,47SQN@768503|Cytophagia	976|Bacteroidetes	L	GIY-YIG catalytic domain	-	-	-	ko:K07461	-	-	-	-	ko00000	-	-	-	GIY-YIG
BYD3_k127_6771507_3	1123276.KB893269_gene4778	5.225e-57	200.0	293T3@1|root,2ZR8H@2|Bacteria,4NMK3@976|Bacteroidetes,47PZ7@768503|Cytophagia	976|Bacteroidetes	S	Protein of unknown function (DUF2975)	-	-	-	-	-	-	-	-	-	-	-	-	DUF2975
BYD3_k127_6771507_7	485918.Cpin_5711	2.064e-35	135.0	COG3655@1|root,COG3655@2|Bacteria,4NUP7@976|Bacteroidetes,1IT96@117747|Sphingobacteriia	976|Bacteroidetes	K	Cro/C1-type HTH DNA-binding domain	-	-	-	ko:K07727	-	-	-	-	ko00000,ko03000	-	-	-	HTH_26
BYD3_k127_6771507_4	1131269.AQVV01000026_gene124	1.234e-50	184.0	COG2259@1|root,COG2259@2|Bacteria	2|Bacteria	S	methylamine metabolic process	-	-	-	ko:K15977	-	-	-	-	ko00000	-	-	-	DoxX
BYD3_k127_6771507_6	1121904.ARBP01000001_gene5953	1.044e-36	142.0	COG3631@1|root,COG3631@2|Bacteria,4NVNP@976|Bacteroidetes,47SCI@768503|Cytophagia	976|Bacteroidetes	S	Ketosteroid isomerase-related protein	-	-	-	-	-	-	-	-	-	-	-	-	SnoaL_2
BYD3_k127_6771507_2	1250232.JQNJ01000001_gene2678	3.692e-73	251.0	COG0664@1|root,COG0664@2|Bacteria,4NJRX@976|Bacteroidetes,1IIWQ@117743|Flavobacteriia	976|Bacteroidetes	T	Cyclic nucleotide-monophosphate binding domain	-	-	-	-	-	-	-	-	-	-	-	-	cNMP_binding
BYD3_k127_6771507_0	760192.Halhy_4972	3.86e-203	641.0	COG3119@1|root,COG3119@2|Bacteria,4NEPB@976|Bacteroidetes,1IPI2@117747|Sphingobacteriia	976|Bacteroidetes	P	PFAM sulfatase	-	-	-	-	-	-	-	-	-	-	-	-	Sulfatase
BYD3_k127_6771507_5	880070.Cycma_4214	1.131e-42	164.0	COG0457@1|root,COG0457@2|Bacteria,4NRIH@976|Bacteroidetes,47QEH@768503|Cytophagia	976|Bacteroidetes	S	Protein of unknown function (DUF2911)	-	-	-	-	-	-	-	-	-	-	-	-	DUF2911
BYD3_k127_6771507_8	1048983.EL17_02245	1.62e-21	104.0	COG0589@1|root,COG0589@2|Bacteria,4NHBB@976|Bacteroidetes,47R2C@768503|Cytophagia	976|Bacteroidetes	T	Universal stress protein	uspA	-	-	-	-	-	-	-	-	-	-	-	DUF2007,Usp
BYD3_k127_6771507_1	272134.KB731324_gene3214	8.536e-109	366.0	COG0823@1|root,COG1506@1|root,COG0823@2|Bacteria,COG1506@2|Bacteria,1G1Q1@1117|Cyanobacteria,1H8JB@1150|Oscillatoriales	1117|Cyanobacteria	E	PFAM Prolyl oligopeptidase family	-	-	-	-	-	-	-	-	-	-	-	-	DUF3471,PD40,Peptidase_S9,Peptidase_S9_N
BYD3_k127_678302_2	1237149.C900_00350	5.593e-106	359.0	COG2885@1|root,COG2885@2|Bacteria,4PIU2@976|Bacteroidetes,47SAQ@768503|Cytophagia	976|Bacteroidetes	M	Pfam:DUF3308	-	-	-	-	-	-	-	-	-	-	-	-	PorP_SprF
BYD3_k127_678302_5	927658.AJUM01000022_gene1003	3.53e-14	88.0	COG1361@1|root,COG2304@1|root,COG5184@1|root,COG1361@2|Bacteria,COG2304@2|Bacteria,COG5184@2|Bacteria,4NMB8@976|Bacteroidetes,2G13I@200643|Bacteroidia,3XJY5@558415|Marinilabiliaceae	976|Bacteroidetes	M	C-terminal domain of CHU protein family	-	-	-	-	-	-	-	-	-	-	-	-	CHU_C,DUF11
BYD3_k127_678302_0	865937.Gilli_1964	2.983e-173	592.0	COG3291@1|root,COG5295@1|root,COG3291@2|Bacteria,COG5295@2|Bacteria,4NF6Q@976|Bacteroidetes,1I12N@117743|Flavobacteriia,2P7RA@244698|Gillisia	976|Bacteroidetes	UW	candidate b-glycosidase, glycoside hydrolase family 8 protein	-	-	-	-	-	-	-	-	-	-	-	-	Beta_helix,Big_3_3,M60-like_N,NosD,Peptidase_M60
BYD3_k127_678302_4	63737.Npun_F1899	9.942e-48	190.0	COG3420@1|root,COG3420@2|Bacteria,1GK7Z@1117|Cyanobacteria,1HTFU@1161|Nostocales	1117|Cyanobacteria	P	alginic acid biosynthetic process	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_678302_1	1121904.ARBP01000012_gene1305	2.215e-144	467.0	COG0438@1|root,COG0438@2|Bacteria,4NIP2@976|Bacteroidetes,47MWD@768503|Cytophagia	976|Bacteroidetes	M	PFAM Glycosyl transferases group 1	-	-	-	-	-	-	-	-	-	-	-	-	Glyco_trans_4_4,Glyco_transf_4,Glycos_transf_1
BYD3_k127_678302_3	1237149.C900_02441	3.092e-75	263.0	COG0463@1|root,COG0463@2|Bacteria,4PPKA@976|Bacteroidetes,47YP2@768503|Cytophagia	976|Bacteroidetes	M	Glycosyltransferase like family 2	-	-	-	-	-	-	-	-	-	-	-	-	Glycos_transf_2
BYD3_k127_6801500_5	1121373.KB903624_gene2433	7.115e-24	102.0	COG0640@1|root,COG0640@2|Bacteria,4NSDX@976|Bacteroidetes,47R1P@768503|Cytophagia	976|Bacteroidetes	K	helix_turn_helix, Arsenical Resistance Operon Repressor	-	-	-	-	-	-	-	-	-	-	-	-	HTH_20,HTH_5
BYD3_k127_6801500_4	1237149.C900_05570	2.841e-46	173.0	COG3832@1|root,COG3832@2|Bacteria,4NST9@976|Bacteroidetes,47R8V@768503|Cytophagia	976|Bacteroidetes	S	Activator of Hsp90 ATPase homolog 1-like protein	-	-	-	-	-	-	-	-	-	-	-	-	AHSA1
BYD3_k127_6801500_6	714943.Mucpa_6548	9.939e-13	70.0	COG0500@1|root,COG0500@2|Bacteria,4NVGC@976|Bacteroidetes,1IU64@117747|Sphingobacteriia	976|Bacteroidetes	Q	methyltransferase	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_6801500_2	1123248.KB893317_gene4274	1.108e-58	206.0	COG3832@1|root,COG3832@2|Bacteria,4NST9@976|Bacteroidetes,1ISQV@117747|Sphingobacteriia	976|Bacteroidetes	S	PFAM Activator of Hsp90 ATPase	-	-	-	-	-	-	-	-	-	-	-	-	AHSA1
BYD3_k127_6801500_3	1177928.TH2_14687	1.431e-46	179.0	COG2040@1|root,COG2040@2|Bacteria,1MUXU@1224|Proteobacteria,2TURU@28211|Alphaproteobacteria,2JR3K@204441|Rhodospirillales	204441|Rhodospirillales	E	Homocysteine S-methyltransferase	-	-	-	-	-	-	-	-	-	-	-	-	S-methyl_trans
BYD3_k127_6801500_0	760192.Halhy_1749	8.263e-107	351.0	COG3000@1|root,COG3000@2|Bacteria,4NI62@976|Bacteroidetes,1IY9P@117747|Sphingobacteriia	976|Bacteroidetes	I	Fatty acid hydroxylase superfamily	-	-	-	-	-	-	-	-	-	-	-	-	FA_hydroxylase
BYD3_k127_6801500_1	1250232.JQNJ01000001_gene3217	1.946e-98	333.0	COG0457@1|root,COG5616@1|root,COG0457@2|Bacteria,COG5616@2|Bacteria	2|Bacteria	S	cAMP biosynthetic process	pelC	-	-	ko:K21008	ko02025,map02025	-	-	-	ko00000,ko00001	-	-	-	LpoB
BYD3_k127_6822642_2	761193.Runsl_2740	3.977e-211	670.0	COG0521@1|root,COG4198@1|root,COG0521@2|Bacteria,COG4198@2|Bacteria,4NEQC@976|Bacteroidetes,47N95@768503|Cytophagia	976|Bacteroidetes	H	Starch-binding associating with outer membrane	-	-	-	-	-	-	-	-	-	-	-	-	SusD-like_2
BYD3_k127_6822642_0	761193.Runsl_2739	0.0	1434.0	COG4206@1|root,COG4774@1|root,COG4206@2|Bacteria,COG4774@2|Bacteria,4NZWU@976|Bacteroidetes	976|Bacteroidetes	H	TonB-linked outer membrane protein, SusC RagA family	-	-	-	-	-	-	-	-	-	-	-	-	CarbopepD_reg_2,Plug,STN,TonB_dep_Rec
BYD3_k127_6822642_3	1288963.ADIS_1083	5.713e-103	341.0	COG1940@1|root,COG1940@2|Bacteria,4NJ71@976|Bacteroidetes,47MF1@768503|Cytophagia	976|Bacteroidetes	GK	PFAM ROK family	-	-	2.7.1.2	ko:K00845	ko00010,ko00052,ko00500,ko00520,ko00521,ko00524,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00052,map00500,map00520,map00521,map00524,map01100,map01110,map01120,map01130,map01200	M00001,M00549	R00299,R01600,R01786	RC00002,RC00017	ko00000,ko00001,ko00002,ko01000	-	-	-	ROK
BYD3_k127_6822642_1	504472.Slin_6586	8.423e-260	809.0	COG3525@1|root,COG3525@2|Bacteria,4NE08@976|Bacteroidetes,47JFD@768503|Cytophagia	976|Bacteroidetes	G	PFAM Glycoside hydrolase, family 20, catalytic core	-	-	3.2.1.52	ko:K12373	ko00511,ko00513,ko00520,ko00531,ko00603,ko00604,ko01100,ko04142,map00511,map00513,map00520,map00531,map00603,map00604,map01100,map04142	M00079	R00022,R06004,R11316	RC00049	ko00000,ko00001,ko00002,ko01000,ko03110	-	GH20	-	CHB_HEX,CHB_HEX_C,Glyco_hydro_20,Glyco_hydro_20b
BYD3_k127_68323_6	700598.Niako_1002	4.073e-31	123.0	COG3533@1|root,COG3533@2|Bacteria,4NFW3@976|Bacteroidetes,1IR7T@117747|Sphingobacteriia	976|Bacteroidetes	S	coagulation factor 5 8 type	-	-	-	ko:K09955	-	-	-	-	ko00000	-	-	-	Glyco_hydro_127
BYD3_k127_68323_3	1123248.KB893318_gene4225	4.274e-125	402.0	COG0235@1|root,COG0235@2|Bacteria,4NGMP@976|Bacteroidetes,1IPP5@117747|Sphingobacteriia	976|Bacteroidetes	G	PFAM Class II aldolase adducin	araD	-	5.1.3.4	ko:K03077	ko00040,ko00053,ko01100,ko01120,map00040,map00053,map01100,map01120	M00550	R05850	RC01479	ko00000,ko00001,ko00002,ko01000	-	-	-	Aldolase_II
BYD3_k127_68323_1	714943.Mucpa_4122	9.829e-271	842.0	COG1069@1|root,COG1069@2|Bacteria,4NEFQ@976|Bacteroidetes,1IQ36@117747|Sphingobacteriia	976|Bacteroidetes	G	Belongs to the ribulokinase family	araB	-	2.7.1.16	ko:K00853	ko00040,ko01100,map00040,map01100	-	R01526,R02439	RC00002,RC00538	ko00000,ko00001,ko01000	-	-	-	FGGY_C,FGGY_N
BYD3_k127_68323_4	700598.Niako_6312	4.67e-91	305.0	COG0744@1|root,COG0744@2|Bacteria,4NF90@976|Bacteroidetes,1IRZ0@117747|Sphingobacteriia	976|Bacteroidetes	M	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors	mtgA	-	2.4.1.129	ko:K03814	ko00550,map00550	-	-	-	ko00000,ko00001,ko01000,ko01003,ko01011	-	GT51	-	Transgly
BYD3_k127_68323_0	1123248.KB893314_gene3542	2.048e-289	896.0	COG2303@1|root,COG2303@2|Bacteria,4NHJT@976|Bacteroidetes,1IRDW@117747|Sphingobacteriia	976|Bacteroidetes	E	FAD dependent oxidoreductase	-	-	-	-	-	-	-	-	-	-	-	-	GMC_oxred_C,GMC_oxred_N
BYD3_k127_68323_2	761193.Runsl_4130	1.87e-128	417.0	COG5285@1|root,COG5285@2|Bacteria,4NGMY@976|Bacteroidetes,47MFK@768503|Cytophagia	976|Bacteroidetes	Q	Phytanoyl-CoA dioxygenase (PhyH)	-	-	-	-	-	-	-	-	-	-	-	-	PhyH
BYD3_k127_68323_5	509635.N824_26605	2.525e-63	227.0	COG3823@1|root,COG3823@2|Bacteria,4P2CR@976|Bacteroidetes,1IXIA@117747|Sphingobacteriia	976|Bacteroidetes	O	Glutamine cyclotransferase	-	-	-	-	-	-	-	-	-	-	-	-	Glu_cyclase_2
BYD3_k127_68323_7	1122621.ATZA01000008_gene863	0.0002543	44.0	COG1502@1|root,COG1502@2|Bacteria,4NMXS@976|Bacteroidetes,1ISBY@117747|Sphingobacteriia	976|Bacteroidetes	I	ORF6N domain	-	-	-	-	-	-	-	-	-	-	-	-	ORF6N
BYD3_k127_6832438_5	1237149.C900_01610	5.071e-61	212.0	COG1331@1|root,COG1331@2|Bacteria,4PKPW@976|Bacteroidetes,47XYJ@768503|Cytophagia	976|Bacteroidetes	O	Protein of unknown function, DUF255	-	-	-	-	-	-	-	-	-	-	-	-	Thioredox_DsbH,Thioredoxin_2,Thioredoxin_7
BYD3_k127_6832438_4	1237149.C900_04853	1.359e-79	269.0	COG2316@1|root,COG2316@2|Bacteria,4NU4P@976|Bacteroidetes	976|Bacteroidetes	S	Metal dependent phosphohydrolases with conserved 'HD' motif.	-	-	-	-	-	-	-	-	-	-	-	-	HD
BYD3_k127_6832438_3	1237149.C900_04852	1.317e-83	291.0	COG0457@1|root,COG0457@2|Bacteria	1237149.C900_04852|-	S	peptidyl-tyrosine sulfation	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_6832438_6	1237149.C900_04851	1.024e-39	153.0	2CM2H@1|root,32SDI@2|Bacteria,4NSAF@976|Bacteroidetes,47R71@768503|Cytophagia	976|Bacteroidetes	S	Putative lumazine-binding	-	-	-	-	-	-	-	-	-	-	-	-	Lumazine_bd_2
BYD3_k127_6832438_8	1237149.C900_04850	1.437e-28	121.0	COG2062@1|root,COG2062@2|Bacteria,4PMDV@976|Bacteroidetes,47Y2D@768503|Cytophagia	976|Bacteroidetes	T	Phosphoglycerate mutase family	-	-	-	-	-	-	-	-	-	-	-	-	His_Phos_1
BYD3_k127_6832438_1	1237149.C900_05703	2.751e-156	499.0	COG1236@1|root,COG1236@2|Bacteria,4NFN7@976|Bacteroidetes,47JDM@768503|Cytophagia	976|Bacteroidetes	J	exonuclease of the beta-lactamase fold involved in RNA processing	-	-	-	ko:K07577	-	-	-	-	ko00000	-	-	-	Lactamase_B
BYD3_k127_6832438_0	1122179.KB890434_gene825	3.795e-219	692.0	COG1793@1|root,COG1793@2|Bacteria,4NEKP@976|Bacteroidetes,1IQCK@117747|Sphingobacteriia	976|Bacteroidetes	L	DNA ligase	lig	-	6.5.1.1,6.5.1.6,6.5.1.7	ko:K10747	ko03030,ko03410,ko03420,ko03430,map03030,map03410,map03420,map03430	-	R00381,R00382,R10822,R10823	RC00005	ko00000,ko00001,ko01000,ko03032,ko03400	-	-	-	DNA_ligase_A_C,DNA_ligase_A_M,DNA_ligase_A_N
BYD3_k127_6832438_7	313606.M23134_02861	1.538e-30	124.0	COG2885@1|root,COG2885@2|Bacteria,4P5MU@976|Bacteroidetes	976|Bacteroidetes	M	OmpA family	-	-	-	-	-	-	-	-	-	-	-	-	OmpA
BYD3_k127_6832438_11	880073.Calab_0598	3.183e-08	56.0	COG0399@1|root,COG0399@2|Bacteria,2NS1A@2323|unclassified Bacteria	2|Bacteria	M	23S rRNA-intervening sequence protein	-	-	2.6.1.102	ko:K13010	ko00520,map00520	-	R10460	RC00006,RC00781	ko00000,ko00001,ko01000,ko01005,ko01007	-	-	-	23S_rRNA_IVP,DegT_DnrJ_EryC1
BYD3_k127_6832438_9	1506583.JQJY01000007_gene4188	1.444e-11	67.0	COG0399@1|root,COG0399@2|Bacteria,4NVFZ@976|Bacteroidetes,1I3II@117743|Flavobacteriia,2NWDS@237|Flavobacterium	976|Bacteroidetes	M	23S rRNA-intervening sequence protein	-	-	-	-	-	-	-	-	-	-	-	-	23S_rRNA_IVP
BYD3_k127_6832438_2	1237149.C900_04080	1.189e-122	395.0	COG1136@1|root,COG1136@2|Bacteria,4NEC5@976|Bacteroidetes,47N33@768503|Cytophagia	976|Bacteroidetes	V	ABC transporter	-	-	-	-	-	-	-	-	-	-	-	-	ABC_tran
BYD3_k127_6832438_12	1123057.P872_15785	4.001e-06	54.0	COG1538@1|root,COG1538@2|Bacteria,4NU3A@976|Bacteroidetes,47P0C@768503|Cytophagia	976|Bacteroidetes	MU	Outer membrane efflux protein	-	-	-	-	-	-	-	-	-	-	-	-	OEP
BYD3_k127_6833126_1	1122605.KB893645_gene1092	1.077e-24	107.0	COG0460@1|root,COG0460@2|Bacteria,4NHRC@976|Bacteroidetes,1IPM4@117747|Sphingobacteriia	976|Bacteroidetes	E	homoserine dehydrogenase	hom	-	1.1.1.3	ko:K00003	ko00260,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00260,map00270,map00300,map01100,map01110,map01120,map01130,map01230	M00017,M00018	R01773,R01775	RC00087	ko00000,ko00001,ko00002,ko01000	-	-	-	Homoserine_dh,NAD_binding_3
BYD3_k127_6833126_0	1120965.AUBV01000003_gene308	1.558e-244	758.0	COG2871@1|root,COG2871@2|Bacteria,4NFKC@976|Bacteroidetes,47NPF@768503|Cytophagia	976|Bacteroidetes	C	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. The first step is catalyzed by NqrF, which accepts electrons from NADH and reduces ubiquinone-1 to ubisemiquinone by a one-electron transfer pathway	nqrF	-	1.6.5.8	ko:K00351	-	-	-	-	ko00000,ko01000	-	-	-	FAD_binding_6,Fer2,NAD_binding_1
BYD3_k127_6833126_2	1123277.KB893228_gene2147	2.979e-20	94.0	2CEJ5@1|root,2Z7RK@2|Bacteria,4NGWQ@976|Bacteroidetes,47N0C@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	Phenol_MetA_deg
BYD3_k127_6838958_1	1250232.JQNJ01000001_gene3864	2.463e-88	293.0	COG0673@1|root,COG0673@2|Bacteria,4NEJM@976|Bacteroidetes,1HZQQ@117743|Flavobacteriia	976|Bacteroidetes	S	Oxidoreductase family, NAD-binding Rossmann fold	-	-	-	-	-	-	-	-	-	-	-	-	GFO_IDH_MocA
BYD3_k127_6838958_0	509635.N824_05000	7.433e-177	559.0	COG1064@1|root,COG1064@2|Bacteria,4NFGP@976|Bacteroidetes,1IPFK@117747|Sphingobacteriia	976|Bacteroidetes	C	alcohol dehydrogenase	-	-	-	ko:K13979	-	-	-	-	ko00000,ko01000	-	-	-	ADH_N,ADH_zinc_N
BYD3_k127_6838958_4	1121101.HMPREF1532_01628	3.612e-09	61.0	COG0642@1|root,COG0745@1|root,COG3292@1|root,COG0745@2|Bacteria,COG2205@2|Bacteria,COG3292@2|Bacteria,4NDXU@976|Bacteroidetes,2FM2N@200643|Bacteroidia,4AMCC@815|Bacteroidaceae	976|Bacteroidetes	T	ATPase histidine kinase DNA gyrase B HSP90 domain protein	-	-	-	-	-	-	-	-	-	-	-	-	HATPase_c,HTH_18,HisKA,Reg_prop,Response_reg,Y_Y_Y
BYD3_k127_6838958_2	1185876.BN8_02241	4.346e-62	220.0	2AFGT@1|root,315H4@2|Bacteria,4P2U0@976|Bacteroidetes,47UT9@768503|Cytophagia	976|Bacteroidetes	S	Protein of unknown function (DUF3455)	-	-	-	-	-	-	-	-	-	-	-	-	DUF3455
BYD3_k127_6838958_3	509635.N824_00495	5.418e-12	66.0	COG1529@1|root,COG1529@2|Bacteria,4NFFU@976|Bacteroidetes,1IR1H@117747|Sphingobacteriia	976|Bacteroidetes	C	PFAM Aldehyde oxidase xanthine dehydrogenase, molybdopterin binding	-	-	1.3.99.16	ko:K07303	-	-	-	-	ko00000,ko01000	-	-	-	Ald_Xan_dh_C2
BYD3_k127_6846353_2	153721.MYP_3066	3.119e-45	164.0	28H95@1|root,2Z7KY@2|Bacteria,4NG37@976|Bacteroidetes,47KWH@768503|Cytophagia	976|Bacteroidetes	S	Protein of unknown function (DUF4256)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4256
BYD3_k127_6846353_1	1296416.JACB01000027_gene4076	2.731e-60	219.0	2BWKA@1|root,32QZQ@2|Bacteria,4P163@976|Bacteroidetes,1I86M@117743|Flavobacteriia	976|Bacteroidetes	S	Concanavalin A-like lectin/glucanases superfamily	-	-	-	-	-	-	-	-	-	-	-	-	Laminin_G_3
BYD3_k127_6846353_3	1239962.C943_00992	1.472e-31	130.0	2C852@1|root,32YB2@2|Bacteria,4NM63@976|Bacteroidetes,47S6T@768503|Cytophagia	976|Bacteroidetes	S	Domain of unknown function (DUF4136)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4136
BYD3_k127_6846353_0	1250232.JQNJ01000001_gene3003	5.474e-91	311.0	COG1680@1|root,COG1680@2|Bacteria,4NRU6@976|Bacteroidetes,1I317@117743|Flavobacteriia	976|Bacteroidetes	V	Beta-lactamase	-	-	-	-	-	-	-	-	-	-	-	-	Beta-lactamase
BYD3_k127_6862518_2	1499967.BAYZ01000005_gene5453	1.362e-15	82.0	2DTZ2@1|root,33N9Y@2|Bacteria	2|Bacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_6862518_0	1237149.C900_00364	2.275e-148	490.0	COG3829@1|root,COG4251@1|root,COG3829@2|Bacteria,COG4251@2|Bacteria,4NM7H@976|Bacteroidetes,47XEC@768503|Cytophagia	976|Bacteroidetes	T	PAS domain	-	-	-	-	-	-	-	-	-	-	-	-	HATPase_c,HisKA,PAS_3,PAS_4,PAS_9
BYD3_k127_6862518_1	1237149.C900_00365	2.351e-117	384.0	COG0454@1|root,COG0456@2|Bacteria,4NFWE@976|Bacteroidetes,47M7W@768503|Cytophagia	976|Bacteroidetes	K	Psort location Cytoplasmic, score 8.96	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_6878762_3	1123037.AUDE01000005_gene3083	4.404e-156	538.0	COG3292@1|root,COG4191@1|root,COG3292@2|Bacteria,COG4191@2|Bacteria,4NEJX@976|Bacteroidetes,1HXCA@117743|Flavobacteriia	976|Bacteroidetes	T	COG0642 Signal transduction histidine kinase	-	-	-	-	-	-	-	-	-	-	-	-	HATPase_c,HisKA,Reg_prop,Y_Y_Y
BYD3_k127_6878762_5	1166018.FAES_3716	1.235e-94	316.0	28IGY@1|root,2Z8I9@2|Bacteria,4NJJ3@976|Bacteroidetes,47UAF@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_6878762_4	1453498.LG45_09625	4.197e-138	446.0	COG3781@1|root,COG3781@2|Bacteria,4NGJ0@976|Bacteroidetes,1HYG9@117743|Flavobacteriia,2NVTB@237|Flavobacterium	976|Bacteroidetes	S	Bestrophin, RFP-TM, chloride channel	-	-	-	ko:K08994	-	-	-	-	ko00000,ko02000	1.A.46.2	-	-	Bestrophin
BYD3_k127_6878762_0	153721.MYP_3986	1.34e-208	663.0	COG0025@1|root,COG0025@2|Bacteria,4NFHG@976|Bacteroidetes,47KAJ@768503|Cytophagia	976|Bacteroidetes	P	NhaP-type Na H and K H	-	-	-	ko:K03316	-	-	-	-	ko00000	2.A.36	-	-	Na_H_Exchanger
BYD3_k127_6878762_1	1237149.C900_05889	1.405e-177	568.0	COG2265@1|root,COG2265@2|Bacteria,4NFP1@976|Bacteroidetes,47KB6@768503|Cytophagia	976|Bacteroidetes	J	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family	rumA	-	2.1.1.190	ko:K03215	-	-	-	-	ko00000,ko01000,ko03009	-	-	-	TRAM,tRNA_U5-meth_tr
BYD3_k127_6878762_2	1237149.C900_05890	4.707e-162	540.0	COG3291@1|root,COG3291@2|Bacteria,4NDU9@976|Bacteroidetes,47MS8@768503|Cytophagia	976|Bacteroidetes	M	C-terminal domain of CHU protein family	-	-	-	-	-	-	-	-	-	-	-	-	CHU_C,PKD
BYD3_k127_6904059_2	886293.Sinac_6095	1.042e-62	226.0	COG1073@1|root,COG1073@2|Bacteria,2IYEI@203682|Planctomycetes	203682|Planctomycetes	Q	alpha beta	-	-	-	-	-	-	-	-	-	-	-	-	DLH
BYD3_k127_6904059_0	880070.Cycma_1230	6.921e-208	670.0	COG0627@1|root,COG0627@2|Bacteria,4NPE4@976|Bacteroidetes,47UFC@768503|Cytophagia	976|Bacteroidetes	S	Putative esterase	-	-	-	-	-	-	-	-	-	-	-	-	Esterase
BYD3_k127_6904059_1	1134474.O59_001270	4.571e-105	349.0	COG1295@1|root,COG1295@2|Bacteria,1R9UY@1224|Proteobacteria,1S11F@1236|Gammaproteobacteria,1FI1D@10|Cellvibrio	1236|Gammaproteobacteria	S	Virulence factor BrkB	-	-	-	ko:K07058	-	-	-	-	ko00000	-	-	-	Virul_fac_BrkB
BYD3_k127_6904059_3	1380600.AUYN01000013_gene2180	9.723e-60	213.0	COG0449@1|root,COG0449@2|Bacteria,4PKBN@976|Bacteroidetes,1IJ6K@117743|Flavobacteriia	976|Bacteroidetes	M	ORF6N domain	-	-	-	-	-	-	-	-	-	-	-	-	ORF6N
BYD3_k127_6919490_1	1237149.C900_01529	2.199e-217	694.0	COG0577@1|root,COG0577@2|Bacteria,4NDUK@976|Bacteroidetes,47JJN@768503|Cytophagia	976|Bacteroidetes	V	FtsX-like permease family	-	-	-	-	-	-	-	-	-	-	-	-	FtsX,MacB_PCD
BYD3_k127_6919490_3	643867.Ftrac_3425	4.647e-163	541.0	COG0577@1|root,COG0577@2|Bacteria,4NDW7@976|Bacteroidetes,47N35@768503|Cytophagia	976|Bacteroidetes	V	FtsX-like permease family	-	-	-	-	-	-	-	-	-	-	-	-	FtsX,MacB_PCD
BYD3_k127_6919490_0	760192.Halhy_3918	8.875e-242	770.0	COG0577@1|root,COG0577@2|Bacteria,4NDUK@976|Bacteroidetes,1IW4Z@117747|Sphingobacteriia	976|Bacteroidetes	V	MacB-like periplasmic core domain	-	-	-	ko:K02004	-	M00258	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	FtsX,MacB_PCD
BYD3_k127_6919490_4	1288963.ADIS_3293	2.058e-153	493.0	28JXN@1|root,2Z9N3@2|Bacteria,4NJUA@976|Bacteroidetes,47NJF@768503|Cytophagia	976|Bacteroidetes	S	Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella	-	-	-	-	-	-	-	-	-	-	-	-	FG-GAP,VCBS
BYD3_k127_6919490_2	700598.Niako_0098	7.43e-197	619.0	COG0476@1|root,COG0607@1|root,COG0476@2|Bacteria,COG0607@2|Bacteria,4NFUD@976|Bacteroidetes,1IPBH@117747|Sphingobacteriia	976|Bacteroidetes	H	UBA THIF-type NAD FAD binding protein	moeZ	-	2.7.7.80,2.8.1.11	ko:K21029,ko:K21147	ko04122,map04122	-	R07459,R07461	RC00043	ko00000,ko00001,ko01000	-	-	-	Rhodanese,ThiF
BYD3_k127_6926854_4	1453505.JASY01000012_gene4220	1.597e-122	398.0	COG1912@1|root,COG1912@2|Bacteria,4NG9Y@976|Bacteroidetes,1IMWH@117743|Flavobacteriia,2NVNP@237|Flavobacterium	976|Bacteroidetes	S	S-adenosyl-l-methionine hydroxide adenosyltransferase	-	-	-	ko:K22205	-	-	-	-	ko00000,ko01000	-	-	-	SAM_adeno_trans
BYD3_k127_6926854_8	1185876.BN8_01450	2.424e-58	219.0	2C34F@1|root,2ZA5Y@2|Bacteria,4NGPA@976|Bacteroidetes,47MYC@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_6926854_7	153721.MYP_2285	7.335e-67	234.0	2DKU7@1|root,30BG5@2|Bacteria,4NNSQ@976|Bacteroidetes,47PSB@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	DUF1080
BYD3_k127_6926854_9	1280706.AUJE01000041_gene866	4.66e-48	183.0	COG1073@1|root,COG1073@2|Bacteria,1UKAH@1239|Firmicutes	1239|Firmicutes	S	Alpha/beta hydrolase family	-	-	-	-	-	-	-	-	-	-	-	-	Abhydrolase_1
BYD3_k127_6926854_5	41431.PCC8801_0005	4.222e-88	297.0	COG2020@1|root,COG2020@2|Bacteria,1G4HN@1117|Cyanobacteria,3KGIV@43988|Cyanothece	1117|Cyanobacteria	O	Isoprenylcysteine carboxyl methyltransferase (ICMT) family	-	-	2.1.1.334	ko:K21310	ko00920,map00920	-	R11546	RC02653	ko00000,ko00001,ko01000	-	-	-	NnrU,PEMT
BYD3_k127_6926854_2	234267.Acid_5969	6.234e-151	491.0	COG0076@1|root,COG0076@2|Bacteria,3Y365@57723|Acidobacteria	57723|Acidobacteria	E	Pyridoxal-dependent decarboxylase conserved domain	-	-	-	-	-	-	-	-	-	-	-	-	Pyridoxal_deC
BYD3_k127_6926854_1	404589.Anae109_4242	1.275e-152	504.0	COG3829@1|root,COG3829@2|Bacteria,1NU8B@1224|Proteobacteria,43BKG@68525|delta/epsilon subdivisions,2X6YU@28221|Deltaproteobacteria,2YYW6@29|Myxococcales	28221|Deltaproteobacteria	K	ATPase associated with various cellular activities, AAA_5	-	-	-	ko:K02584	ko02020,map02020	-	-	-	ko00000,ko00001,ko03000	-	-	-	GAF,GAF_2,HTH_8,PAS_9,Sigma54_activat
BYD3_k127_6926854_10	1237149.C900_00301	3.074e-43	166.0	COG1926@1|root,COG1926@2|Bacteria	2|Bacteria	Q	phosphoribosyltransferase	prsT	-	-	ko:K07100	-	-	-	-	ko00000	-	-	-	Pribosyltran
BYD3_k127_6926854_3	714943.Mucpa_4492	4.106e-135	437.0	COG0604@1|root,COG0604@2|Bacteria,4NEYW@976|Bacteroidetes,1IP5X@117747|Sphingobacteriia	976|Bacteroidetes	C	PFAM Alcohol dehydrogenase	-	-	1.6.5.5	ko:K00344	-	-	-	-	ko00000,ko01000	-	-	-	ADH_N,ADH_zinc_N,ADH_zinc_N_2
BYD3_k127_6926854_6	468059.AUHA01000002_gene847	7.501e-88	295.0	COG0225@1|root,COG0225@2|Bacteria,4NMAJ@976|Bacteroidetes,1IXDR@117747|Sphingobacteriia	976|Bacteroidetes	O	Peptide methionine sulfoxide reductase	msrA1	-	1.8.4.11	ko:K07304	-	-	-	-	ko00000,ko01000	-	-	-	PMSR
BYD3_k127_6926854_0	504472.Slin_4997	2.614e-176	561.0	COG0673@1|root,COG0673@2|Bacteria,4NGHJ@976|Bacteroidetes,47K7H@768503|Cytophagia	976|Bacteroidetes	S	Oxidoreductase family, NAD-binding Rossmann fold	-	-	-	-	-	-	-	-	-	-	-	-	GFO_IDH_MocA,GFO_IDH_MocA_C
BYD3_k127_6926854_11	1392498.JQLH01000001_gene2466	1.316e-28	118.0	COG2133@1|root,COG3291@1|root,COG3828@1|root,COG4654@1|root,COG2133@2|Bacteria,COG3291@2|Bacteria,COG3828@2|Bacteria,COG4654@2|Bacteria,4NDVK@976|Bacteroidetes,1HZM2@117743|Flavobacteriia,2PG6U@252356|Maribacter	976|Bacteroidetes	CG	Trehalose utilisation	-	-	-	ko:K09992	-	-	-	-	ko00000	-	-	-	Cytochrom_C,Cytochrome_CBB3,GSDH,PKD,ThuA
BYD3_k127_693803_5	1541065.JRFE01000012_gene2451	6.754e-10	70.0	COG4447@1|root,COG4447@2|Bacteria,1G2KP@1117|Cyanobacteria	1117|Cyanobacteria	G	PFAM BNR Asp-box repeat	-	-	-	-	-	-	-	-	-	-	-	-	BNR,PSII_BNR,Sortilin-Vps10
BYD3_k127_693803_3	926549.KI421517_gene1444	1.616e-39	154.0	COG2353@1|root,COG2353@2|Bacteria,4NMWH@976|Bacteroidetes,47PZ0@768503|Cytophagia	976|Bacteroidetes	S	Belongs to the UPF0312 family	-	-	-	-	-	-	-	-	-	-	-	-	YceI
BYD3_k127_693803_1	1237149.C900_04522	7.624e-84	294.0	COG5002@1|root,COG5002@2|Bacteria,4PKBV@976|Bacteroidetes,47M71@768503|Cytophagia	976|Bacteroidetes	T	Signal transduction histidine kinase	rprX	-	2.7.13.3	ko:K07636	ko02020,map02020	M00434	-	-	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	-	-	-	HATPase_c,HisKA
BYD3_k127_693803_2	385682.AFSL01000090_gene952	1.511e-70	245.0	COG0745@1|root,COG0745@2|Bacteria,4NF1I@976|Bacteroidetes,2FNZV@200643|Bacteroidia,3XJ08@558415|Marinilabiliaceae	976|Bacteroidetes	T	Transcriptional regulatory protein, C terminal	rprY	-	-	-	-	-	-	-	-	-	-	-	Response_reg,Trans_reg_C
BYD3_k127_693803_6	1121012.AUKX01000004_gene3576	0.0001665	53.0	28M3Z@1|root,30CAA@2|Bacteria,4NQ02@976|Bacteroidetes,1I2MI@117743|Flavobacteriia,23H9D@178469|Arenibacter	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_693803_4	313606.M23134_05108	1.229e-29	129.0	COG3712@1|root,COG3712@2|Bacteria,4NPJT@976|Bacteroidetes,47UMG@768503|Cytophagia	976|Bacteroidetes	PT	Domain of unknown function (DUF4974)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4974,FecR
BYD3_k127_693803_0	1121904.ARBP01000012_gene1354	3.202e-199	648.0	COG1629@1|root,COG4771@2|Bacteria,4NEBC@976|Bacteroidetes,47N17@768503|Cytophagia	976|Bacteroidetes	P	TonB-dependent Receptor Plug Domain	-	-	-	-	-	-	-	-	-	-	-	-	CarbopepD_reg_2,Plug,TonB_dep_Rec
BYD3_k127_693803_7	313596.RB2501_10055	0.0008264	43.0	COG3712@1|root,COG3712@2|Bacteria,4NH8I@976|Bacteroidetes,1HXP7@117743|Flavobacteriia	976|Bacteroidetes	PT	Fe2 -dicitrate sensor, membrane component	-	-	-	-	-	-	-	-	-	-	-	-	DUF4974,FecR
BYD3_k127_693881_1	1123277.KB893176_gene3718	6.633e-56	208.0	COG3712@1|root,COG3712@2|Bacteria,4NSEH@976|Bacteroidetes,47RNC@768503|Cytophagia	976|Bacteroidetes	PT	Domain of unknown function (DUF4974)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4974,FecR
BYD3_k127_693881_2	504472.Slin_4780	3.21e-38	150.0	COG1595@1|root,COG1595@2|Bacteria,4NSXH@976|Bacteroidetes,47RE2@768503|Cytophagia	976|Bacteroidetes	K	RNA polymerase sigma factor, sigma-70 family	-	-	-	ko:K03088	-	-	-	-	ko00000,ko03021	-	-	-	Sigma70_r2,Sigma70_r4_2
BYD3_k127_693881_0	1492737.FEM08_08440	2.776e-62	217.0	COG2731@1|root,COG2731@2|Bacteria,4NQU1@976|Bacteroidetes,1I4B9@117743|Flavobacteriia,2NVXW@237|Flavobacterium	976|Bacteroidetes	G	Domain of unknown function (DUF386)	-	-	-	-	-	-	-	-	-	-	-	-	DUF386
BYD3_k127_693881_4	643867.Ftrac_2093	1.543e-34	136.0	COG2207@1|root,COG2207@2|Bacteria,4NVDF@976|Bacteroidetes,47RUM@768503|Cytophagia	976|Bacteroidetes	K	Transcriptional regulator	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_693881_5	1121938.AUDY01000012_gene3673	1.835e-08	55.0	2A8J0@1|root,30XM8@2|Bacteria,1V5ZB@1239|Firmicutes,4HHFV@91061|Bacilli,3NEXA@45667|Halobacillus	91061|Bacilli	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_693881_3	1358423.N180_15205	7.935e-38	146.0	COG0475@1|root,COG0490@1|root,COG0475@2|Bacteria,COG0490@2|Bacteria,4NGF6@976|Bacteroidetes,1IQ4D@117747|Sphingobacteriia	976|Bacteroidetes	P	PFAM sodium hydrogen exchanger	nhaA	-	-	ko:K03455	-	-	-	-	ko00000	2.A.37	-	-	Na_H_Exchanger,TrkA_C
BYD3_k127_6944354_0	991.IW20_12955	2.712e-146	471.0	COG0842@1|root,COG0842@2|Bacteria,4NDU0@976|Bacteroidetes,1HX8Q@117743|Flavobacteriia,2NT6W@237|Flavobacterium	976|Bacteroidetes	U	ABC-2 type transporter	ybhS	-	-	ko:K01992	-	M00254	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	ABC2_membrane_3
BYD3_k127_6944354_3	471854.Dfer_5639	3.341e-131	422.0	COG1131@1|root,COG1131@2|Bacteria,4NFW9@976|Bacteroidetes,47MY4@768503|Cytophagia	976|Bacteroidetes	V	AAA domain, putative AbiEii toxin, Type IV TA system	-	-	-	ko:K01990	-	M00254	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	ABC_tran
BYD3_k127_6944354_1	153721.MYP_419	1.016e-144	463.0	COG1131@1|root,COG1131@2|Bacteria,4NFW9@976|Bacteroidetes,47MQX@768503|Cytophagia	976|Bacteroidetes	V	ATPases associated with a variety of cellular activities	-	-	-	ko:K01990	-	M00254	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	ABC_tran
BYD3_k127_6944354_5	1107311.Q767_09110	2.942e-107	355.0	COG1566@1|root,COG1566@2|Bacteria,4PKPZ@976|Bacteroidetes,1I071@117743|Flavobacteriia,2NVFX@237|Flavobacterium	976|Bacteroidetes	V	Barrel-sandwich domain of CusB or HlyD membrane-fusion	-	-	-	ko:K01993	-	-	-	-	ko00000	-	-	-	Biotin_lipoyl_2,HlyD_3,HlyD_D23
BYD3_k127_6944354_2	1107311.Q767_09105	2.159e-135	443.0	COG1538@1|root,COG1538@2|Bacteria,4NFSW@976|Bacteroidetes,1HXCD@117743|Flavobacteriia,2NSVK@237|Flavobacterium	976|Bacteroidetes	MU	Outer membrane efflux protein	-	-	-	-	-	-	-	-	-	-	-	-	OEP
BYD3_k127_6944354_8	471854.Dfer_5635	7.89e-65	228.0	COG1309@1|root,COG1309@2|Bacteria,4NIBT@976|Bacteroidetes,47RIM@768503|Cytophagia	976|Bacteroidetes	K	Bacterial regulatory proteins, tetR family	-	-	-	-	-	-	-	-	-	-	-	-	TetR_N
BYD3_k127_6944354_7	1123277.KB893223_gene5	2.182e-87	297.0	COG0596@1|root,COG0596@2|Bacteria	2|Bacteria	S	hydrolase activity, acting on ester bonds	yclE	GO:0003674,GO:0003824,GO:0016787	3.4.11.5	ko:K01259	ko00330,map00330	-	R00135	-	ko00000,ko00001,ko01000,ko01002	-	-	-	Abhydrolase_1
BYD3_k127_6944354_4	153721.MYP_2742	1.587e-127	413.0	COG2267@1|root,COG2267@2|Bacteria,4NGV3@976|Bacteroidetes,47KHP@768503|Cytophagia	976|Bacteroidetes	I	Alpha/beta hydrolase family	-	-	-	-	-	-	-	-	-	-	-	-	Abhydrolase_6
BYD3_k127_6944354_6	1270193.JARP01000001_gene2982	6.969e-91	301.0	COG0183@1|root,COG0183@2|Bacteria,4NJ25@976|Bacteroidetes,1HZ1B@117743|Flavobacteriia,2NSK2@237|Flavobacterium	976|Bacteroidetes	I	Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation	-	-	2.3.1.16,2.3.1.9	ko:K00626,ko:K00632	ko00071,ko00072,ko00280,ko00281,ko00310,ko00362,ko00380,ko00592,ko00620,ko00630,ko00640,ko00642,ko00650,ko00720,ko00900,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,ko02020,map00071,map00072,map00280,map00281,map00310,map00362,map00380,map00592,map00620,map00630,map00640,map00642,map00650,map00720,map00900,map01100,map01110,map01120,map01130,map01200,map01212,map02020	M00087,M00088,M00095,M00113,M00373,M00374,M00375	R00238,R00829,R00927,R01177,R03778,R03858,R03991,R04546,R04742,R04747,R05506,R05586,R07891,R07895,R07899,R08091,R08095	RC00004,RC00326,RC00405,RC01702,RC02728,RC02898,RC02955	ko00000,ko00001,ko00002,ko01000,ko04147	-	-	-	Thiolase_C,Thiolase_N
BYD3_k127_6959989_4	1305737.JAFX01000001_gene1481	3.671e-82	281.0	COG4805@1|root,COG4805@2|Bacteria,4NFAK@976|Bacteroidetes,47MIN@768503|Cytophagia	976|Bacteroidetes	S	Bacterial protein of unknown function (DUF885)	-	-	-	-	-	-	-	-	-	-	-	-	DUF885
BYD3_k127_6959989_2	1144319.PMI16_02524	2.988e-109	362.0	COG0598@1|root,COG0598@2|Bacteria,1MX09@1224|Proteobacteria,2VHCH@28216|Betaproteobacteria,472GC@75682|Oxalobacteraceae	28216|Betaproteobacteria	P	Mediates influx of magnesium ions	corA	-	-	ko:K03284	-	-	-	-	ko00000,ko02000	1.A.35.1,1.A.35.3	-	-	CorA
BYD3_k127_6959989_3	761193.Runsl_1185	4.811e-102	341.0	COG1413@1|root,COG2010@1|root,COG2133@1|root,COG1413@2|Bacteria,COG2010@2|Bacteria,COG2133@2|Bacteria,4NHMI@976|Bacteroidetes,47K6B@768503|Cytophagia	976|Bacteroidetes	CG	Membrane-bound dehydrogenase domain protein	-	-	-	-	-	-	-	-	-	-	-	-	Cytochrom_C,HEAT_2,PmoA
BYD3_k127_6959989_1	1121904.ARBP01000001_gene5684	8.537e-235	757.0	COG4993@1|root,COG4993@2|Bacteria,4NFK0@976|Bacteroidetes,47KDI@768503|Cytophagia	976|Bacteroidetes	G	Pyrrolo-quinoline quinone	-	-	1.1.5.2	ko:K00117	ko00030,ko01100,ko01110,ko01130,map00030,map01100,map01110,map01130	-	R06620	RC00066	ko00000,ko00001,ko01000	-	-	-	Cytochrome_CBB3,PQQ
BYD3_k127_6959989_0	234267.Acid_3236	1.693e-244	769.0	COG2010@1|root,COG4993@1|root,COG2010@2|Bacteria,COG4993@2|Bacteria	2|Bacteria	G	Dehydrogenase	-	-	1.1.5.2	ko:K00117	ko00030,ko01100,ko01110,ko01130,map00030,map01100,map01110,map01130	-	R06620	RC00066	ko00000,ko00001,ko01000	-	-	-	Cytochrome_CBB3,PQQ,PQQ_2
BYD3_k127_6975409_0	1211813.CAPH01000006_gene1393	2.485e-317	983.0	COG3408@1|root,COG3408@2|Bacteria,4NESP@976|Bacteroidetes,2FMGH@200643|Bacteroidia	976|Bacteroidetes	G	Alpha-L-rhamnosidase N-terminal domain protein	-	-	3.2.1.40	ko:K05989	-	-	-	-	ko00000,ko01000	-	-	-	Bac_rhamnosid,Bac_rhamnosid6H,Bac_rhamnosid_C,Bac_rhamnosid_N
BYD3_k127_6975409_3	172088.AUGA01000007_gene8285	1.38e-48	188.0	COG1680@1|root,COG1680@2|Bacteria,1NHIY@1224|Proteobacteria,2U0A3@28211|Alphaproteobacteria,3JT7A@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	V	Beta-lactamase	-	-	-	-	-	-	-	-	-	-	-	-	Beta-lactamase
BYD3_k127_6975409_1	1121904.ARBP01000021_gene3618	4.804e-98	327.0	COG0684@1|root,COG0684@2|Bacteria,4NF3M@976|Bacteroidetes,47W9V@768503|Cytophagia	976|Bacteroidetes	H	Pfam:Methyltransf_6	-	-	-	-	-	-	-	-	-	-	-	-	RraA-like
BYD3_k127_6975409_2	344747.PM8797T_06380	4.35e-88	301.0	COG0388@1|root,COG0388@2|Bacteria,2IXSE@203682|Planctomycetes	203682|Planctomycetes	S	Carbon-nitrogen hydrolase	-	-	-	-	-	-	-	-	-	-	-	-	CN_hydrolase
BYD3_k127_6989330_0	1237149.C900_02379	7.899e-252	782.0	COG0556@1|root,COG0556@2|Bacteria,4NE6E@976|Bacteroidetes,47KBV@768503|Cytophagia	976|Bacteroidetes	L	damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage	uvrB	-	-	ko:K03702	ko03420,map03420	-	-	-	ko00000,ko00001,ko03400	-	-	-	Helicase_C,ResIII,UVR,UvrB
BYD3_k127_6989330_1	1124780.ANNU01000021_gene2964	1.497e-224	728.0	COG3857@1|root,COG3857@2|Bacteria,4PKEH@976|Bacteroidetes,47YDH@768503|Cytophagia	976|Bacteroidetes	L	PD-(D/E)XK nuclease superfamily	-	-	-	-	-	-	-	-	-	-	-	-	Exonuc_V_gamma,PDDEXK_1
BYD3_k127_7018295_0	1121904.ARBP01000008_gene3401	2.553e-231	737.0	COG0577@1|root,COG0577@2|Bacteria,4NDUK@976|Bacteroidetes,47JJN@768503|Cytophagia	976|Bacteroidetes	V	FtsX-like permease family	-	-	-	-	-	-	-	-	-	-	-	-	FtsX,MacB_PCD
BYD3_k127_7018295_2	1121904.ARBP01000008_gene3400	1.135e-45	167.0	COG1695@1|root,COG1695@2|Bacteria,4NQJP@976|Bacteroidetes,47QWB@768503|Cytophagia	2|Bacteria	K	Transcriptional regulator PadR-like family	-	-	-	-	-	-	-	-	-	-	-	-	PadR
BYD3_k127_7018295_1	1123248.KB893386_gene1857	5.05e-66	236.0	COG3734@1|root,COG3734@2|Bacteria,4NIGZ@976|Bacteroidetes,1IWBG@117747|Sphingobacteriia	976|Bacteroidetes	G	2-keto-3-deoxy-galactonokinase	-	-	2.7.1.58	ko:K00883	ko00052,ko01100,map00052,map01100	M00552	R03387	RC00002,RC00017	ko00000,ko00001,ko00002,ko01000	-	-	-	DGOK
BYD3_k127_7065036_3	317936.Nos7107_2176	2.481e-06	59.0	COG0457@1|root,COG4995@1|root,COG0457@2|Bacteria,COG4995@2|Bacteria,1G135@1117|Cyanobacteria	1117|Cyanobacteria	U	tetratricopeptide repeat	-	-	-	-	-	-	-	-	-	-	-	-	CHAT,TPR_12,TPR_7,TPR_8
BYD3_k127_7065036_2	1317122.ATO12_08335	1.386e-13	80.0	COG0589@1|root,COG0589@2|Bacteria,4NE48@976|Bacteroidetes,1HXRC@117743|Flavobacteriia,2YHS0@290174|Aquimarina	976|Bacteroidetes	T	Universal stress protein family	-	-	-	-	-	-	-	-	-	-	-	-	Usp
BYD3_k127_7065036_1	1189619.pgond44_14053	3.751e-158	506.0	COG3287@1|root,COG3287@2|Bacteria,4NGTB@976|Bacteroidetes,1HX3X@117743|Flavobacteriia	976|Bacteroidetes	T	FIST N domain	-	-	-	-	-	-	-	-	-	-	-	-	FIST,FIST_C
BYD3_k127_7065036_0	1189612.A33Q_2380	3.667e-166	547.0	COG4191@1|root,COG4191@2|Bacteria,4NEJX@976|Bacteroidetes,47U6P@768503|Cytophagia	976|Bacteroidetes	T	SnoaL-like domain	-	-	-	-	-	-	-	-	-	-	-	-	HATPase_c,HisKA,SnoaL_3
BYD3_k127_7070847_9	32057.KB217478_gene1535	2.662e-05	48.0	COG0262@1|root,COG0262@2|Bacteria,1G4ME@1117|Cyanobacteria	1117|Cyanobacteria	H	PFAM RibD C-terminal domain	-	-	-	-	-	-	-	-	-	-	-	-	RibD_C
BYD3_k127_7070847_1	616991.JPOO01000003_gene73	3.478e-222	694.0	COG0673@1|root,COG0673@2|Bacteria,4NGTW@976|Bacteroidetes,1I164@117743|Flavobacteriia,23IAD@178469|Arenibacter	976|Bacteroidetes	S	Oxidoreductase family, NAD-binding Rossmann fold	-	-	-	-	-	-	-	-	-	-	-	-	GFO_IDH_MocA
BYD3_k127_7070847_6	1124780.ANNU01000017_gene1920	1.133e-35	139.0	COG1186@1|root,COG1186@2|Bacteria,4NQ41@976|Bacteroidetes,47R30@768503|Cytophagia	976|Bacteroidetes	J	RF-1 domain	arfB	-	-	ko:K15034	-	-	-	-	ko00000,ko03012	-	-	-	RF-1
BYD3_k127_7070847_4	1267211.KI669560_gene610	1.269e-86	295.0	COG1082@1|root,COG1082@2|Bacteria	2|Bacteria	G	myo-inosose-2 dehydratase activity	-	-	-	-	-	-	-	-	-	-	-	-	AP_endonuc_2
BYD3_k127_7070847_2	471854.Dfer_2569	6.279e-147	476.0	2CD20@1|root,2ZA3P@2|Bacteria,4NHWK@976|Bacteroidetes,47N3B@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_7070847_7	926549.KI421517_gene1208	1.634e-28	123.0	COG2867@1|root,COG2867@2|Bacteria,4NNHS@976|Bacteroidetes,47P7J@768503|Cytophagia	976|Bacteroidetes	I	START domain	-	-	-	-	-	-	-	-	-	-	-	-	START
BYD3_k127_7070847_0	1123248.KB893327_gene799	3.372e-294	910.0	COG2303@1|root,COG2303@2|Bacteria,4NHJT@976|Bacteroidetes,1IRDW@117747|Sphingobacteriia	976|Bacteroidetes	E	FAD dependent oxidoreductase	-	-	-	-	-	-	-	-	-	-	-	-	GMC_oxred_C,GMC_oxred_N
BYD3_k127_7070847_3	1120966.AUBU01000001_gene949	4.263e-131	426.0	COG2010@1|root,COG2010@2|Bacteria,4NHQV@976|Bacteroidetes,47N6X@768503|Cytophagia	976|Bacteroidetes	C	Cytochrome c	-	-	-	-	-	-	-	-	-	-	-	-	Cytochrom_C
BYD3_k127_7070847_5	1380600.AUYN01000010_gene883	4.116e-49	182.0	COG0457@1|root,COG0457@2|Bacteria,4NEYK@976|Bacteroidetes,1I0QJ@117743|Flavobacteriia	976|Bacteroidetes	S	Protein of unknown function (DUF2911)	-	-	-	-	-	-	-	-	-	-	-	-	DUF2911,TPR_2,TPR_8
BYD3_k127_7075090_7	525373.HMPREF0766_11971	1.774e-13	79.0	2C2QD@1|root,2ZW7X@2|Bacteria,4NPHF@976|Bacteroidetes,1ISNA@117747|Sphingobacteriia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_7075090_1	1237149.C900_03169	3.82e-178	564.0	COG2159@1|root,COG2159@2|Bacteria,4NG9U@976|Bacteroidetes,47MDV@768503|Cytophagia	976|Bacteroidetes	S	PFAM Amidohydrolase 2	-	-	-	-	-	-	-	-	-	-	-	-	Amidohydro_2
BYD3_k127_7075090_2	1237149.C900_03167	1.287e-130	426.0	COG0457@1|root,COG0457@2|Bacteria,4NGGZ@976|Bacteroidetes,47JWQ@768503|Cytophagia	976|Bacteroidetes	S	TPR repeat-containing protein	-	-	-	-	-	-	-	-	-	-	-	-	TPR_1,TPR_11,TPR_16,TPR_2,TPR_6,TPR_8
BYD3_k127_7075090_5	1121897.AUGO01000002_gene2273	1.85e-20	93.0	2EFW8@1|root,339NG@2|Bacteria,4NXQM@976|Bacteroidetes,1I6MX@117743|Flavobacteriia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_7075090_4	1237149.C900_03156	2.652e-32	132.0	COG2318@1|root,COG2318@2|Bacteria	1237149.C900_03156|-	S	DinB family	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_7075090_0	1237149.C900_03155	0.0	1039.0	COG2866@1|root,COG2866@2|Bacteria,4NEJA@976|Bacteroidetes,47KZ0@768503|Cytophagia	976|Bacteroidetes	E	PFAM Zinc carboxypeptidase	-	-	-	-	-	-	-	-	-	-	-	-	Peptidase_M14
BYD3_k127_7075090_3	1189612.A33Q_4025	2.57e-34	135.0	2E20X@1|root,32X8W@2|Bacteria,4P6A2@976|Bacteroidetes	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_7075090_6	376686.Fjoh_3583	1.158e-14	77.0	2E945@1|root,333D0@2|Bacteria,4NVPT@976|Bacteroidetes,1IBY3@117743|Flavobacteriia,2NXH3@237|Flavobacterium	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_7079918_2	1123248.KB893318_gene4093	7.69e-24	104.0	COG0671@1|root,COG0671@2|Bacteria,4NF9W@976|Bacteroidetes,1IRBB@117747|Sphingobacteriia	976|Bacteroidetes	I	SPTR Phosphoesterase, PA-phosphatase related	-	-	-	-	-	-	-	-	-	-	-	-	PAP2
BYD3_k127_7079918_0	1237149.C900_02562	0.0	1066.0	COG1554@1|root,COG1554@2|Bacteria,4NFG1@976|Bacteroidetes,47MTU@768503|Cytophagia	976|Bacteroidetes	G	Glycosyl hydrolase family 65, N-terminal domain	kojP	-	-	-	-	-	-	-	-	-	-	-	Glyco_hydro_65N,Glyco_hydro_65m
BYD3_k127_7079918_1	929562.Emtol_1627	6.322e-306	969.0	COG4888@1|root,COG4888@2|Bacteria,4NEE8@976|Bacteroidetes,47MGE@768503|Cytophagia	976|Bacteroidetes	S	ASPIC and UnbV	-	-	-	-	-	-	-	-	-	-	-	-	UnbV_ASPIC,VCBS
BYD3_k127_7087708_6	1392488.JHZY01000002_gene305	7.643e-16	78.0	COG3358@1|root,COG3358@2|Bacteria,4NNWJ@976|Bacteroidetes,1I20T@117743|Flavobacteriia,2XJWG@283735|Leeuwenhoekiella	976|Bacteroidetes	S	Protein of unknown function (DUF1684)	-	-	-	ko:K09164	-	-	-	-	ko00000	-	-	-	DUF1684
BYD3_k127_7087708_2	1237149.C900_05142	3.494e-108	356.0	COG0847@1|root,COG0847@2|Bacteria,4NE82@976|Bacteroidetes,47N5P@768503|Cytophagia	976|Bacteroidetes	L	DNA polymerase III	dnaQ	-	2.7.7.7	ko:K02342	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	M00260	R00375,R00376,R00377,R00378	RC02795	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	-	-	-	RNase_T
BYD3_k127_7087708_1	1237149.C900_05141	7.117e-179	571.0	COG0773@1|root,COG0773@2|Bacteria,4NF99@976|Bacteroidetes,47JEX@768503|Cytophagia	976|Bacteroidetes	M	Mur ligase middle domain	mpl	-	6.3.2.45,6.3.2.8	ko:K01924,ko:K02558	ko00471,ko00550,ko01100,map00471,map00550,map01100	-	R03193	RC00064,RC00141	ko00000,ko00001,ko01000,ko01011	-	-	-	Mur_ligase,Mur_ligase_C,Mur_ligase_M
BYD3_k127_7087708_0	1237149.C900_05140	3.74e-237	742.0	COG0305@1|root,COG0305@2|Bacteria,4NF8P@976|Bacteroidetes,47JB5@768503|Cytophagia	976|Bacteroidetes	L	Participates in initiation and elongation during chromosome replication	dnaB	-	3.6.4.12	ko:K02314	ko03030,ko04112,map03030,map04112	-	-	-	ko00000,ko00001,ko01000,ko03032	-	-	-	DnaB,DnaB_C
BYD3_k127_7087708_4	1279009.ADICEAN_02967	6.854e-43	168.0	COG2010@1|root,COG3291@1|root,COG2010@2|Bacteria,COG3291@2|Bacteria,4NV3K@976|Bacteroidetes,47W7K@768503|Cytophagia	976|Bacteroidetes	C	Pkd domain containing protein	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_7087708_5	926556.Echvi_2950	2.635e-22	102.0	COG3063@1|root,COG3063@2|Bacteria,4PKQM@976|Bacteroidetes,47XZ3@768503|Cytophagia	976|Bacteroidetes	NU	Type IV pilus biogenesis stability protein PilW	-	-	-	-	-	-	-	-	-	-	-	-	TPR_8
BYD3_k127_7087708_3	1120966.AUBU01000010_gene2759	6.45e-65	224.0	COG2086@1|root,COG2086@2|Bacteria,4NFWB@976|Bacteroidetes,47KZ2@768503|Cytophagia	976|Bacteroidetes	C	Electron transfer flavoprotein	etfB	-	-	ko:K03521	-	-	-	-	ko00000	-	-	-	ETF
BYD3_k127_708959_2	153721.MYP_3815	1.562e-180	577.0	COG1649@1|root,COG1649@2|Bacteria,4NJ45@976|Bacteroidetes,47JSI@768503|Cytophagia	976|Bacteroidetes	S	Carbohydrate esterase, sialic acid-specific acetylesterase	-	-	3.1.1.53	ko:K05970	-	-	-	-	ko00000,ko01000	-	-	-	SASA
BYD3_k127_708959_5	926549.KI421517_gene3347	4.471e-11	70.0	COG0662@1|root,COG0662@2|Bacteria	2|Bacteria	G	Cupin 2, conserved barrel domain protein	-	-	2.7.7.13,5.3.1.8	ko:K16011	ko00051,ko00520,ko01100,ko01110,ko01130,ko02025,map00051,map00520,map01100,map01110,map01130,map02025	M00114,M00362	R00885,R01819	RC00002,RC00376	ko00000,ko00001,ko00002,ko01000	-	-	-	Cupin_1,Cupin_2
BYD3_k127_708959_0	1123248.KB893386_gene1969	1.207e-215	676.0	COG1012@1|root,COG1012@2|Bacteria,4NEB7@976|Bacteroidetes,1IPQB@117747|Sphingobacteriia	976|Bacteroidetes	C	Belongs to the aldehyde dehydrogenase family	-	-	1.2.1.3	ko:K00128	ko00010,ko00053,ko00071,ko00280,ko00310,ko00330,ko00340,ko00380,ko00410,ko00561,ko00620,ko00625,ko00903,ko00981,ko01100,ko01110,ko01120,ko01130,map00010,map00053,map00071,map00280,map00310,map00330,map00340,map00380,map00410,map00561,map00620,map00625,map00903,map00981,map01100,map01110,map01120,map01130	M00135	R00264,R00631,R00710,R00904,R01752,R01986,R02549,R02678,R02940,R02957,R03283,R03869,R04065,R04506,R04903,R05050,R05237,R05238,R05286,R06366,R08146	RC00047,RC00071,RC00080,RC00186,RC00218,RC00242,RC00816,RC01500	ko00000,ko00001,ko00002,ko01000	-	-	-	Aldedh
BYD3_k127_708959_3	1408813.AYMG01000015_gene5019	5.912e-70	244.0	COG2071@1|root,COG2071@2|Bacteria,4NNEJ@976|Bacteroidetes,1IS4X@117747|Sphingobacteriia	976|Bacteroidetes	S	Peptidase C26	-	-	-	ko:K07010	-	-	-	-	ko00000,ko01002	-	-	-	Peptidase_C26
BYD3_k127_708959_1	1123248.KB893386_gene1971	2.382e-206	646.0	COG1454@1|root,COG1454@2|Bacteria,4NIU1@976|Bacteroidetes,1ISP5@117747|Sphingobacteriia	976|Bacteroidetes	C	Iron-containing alcohol dehydrogenase	fucO	-	1.1.1.77	ko:K00048	ko00630,ko00640,ko01120,map00630,map00640,map01120	-	R01781,R02257	RC00087,RC00099	ko00000,ko00001,ko01000	-	-	-	Fe-ADH
BYD3_k127_708959_4	1123248.KB893386_gene1972	6.594e-27	110.0	COG0174@1|root,COG0174@2|Bacteria,4NHET@976|Bacteroidetes,1IPJ3@117747|Sphingobacteriia	976|Bacteroidetes	E	Glutamine synthetase, catalytic domain	glnA	-	6.3.1.2	ko:K01915	ko00220,ko00250,ko00630,ko00910,ko01100,ko01120,ko01230,ko02020,ko04217,ko04724,ko04727,map00220,map00250,map00630,map00910,map01100,map01120,map01230,map02020,map04217,map04724,map04727	-	R00253	RC00010,RC02798	ko00000,ko00001,ko01000,ko04147	-	-	-	Gln-synt_C,Gln-synt_N
BYD3_k127_709432_5	592029.DDD_0809	3.862e-65	229.0	COG0218@1|root,COG0218@2|Bacteria,4NEA9@976|Bacteroidetes,1HXAB@117743|Flavobacteriia,3HJKG@363408|Nonlabens	976|Bacteroidetes	D	Necessary for normal cell division and for the maintenance of normal septation	engB	GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464	-	ko:K03978	-	-	-	-	ko00000,ko03036	-	-	-	MMR_HSR1
BYD3_k127_709432_0	1237149.C900_03749	6.074e-250	788.0	COG0823@1|root,COG2885@1|root,COG0823@2|Bacteria,COG2885@2|Bacteria,4NHCE@976|Bacteroidetes,47NZ4@768503|Cytophagia	976|Bacteroidetes	MU	OmpA family	-	-	-	-	-	-	-	-	-	-	-	-	OmpA,PD40
BYD3_k127_709432_3	1237149.C900_03750	6.271e-106	347.0	COG0500@1|root,COG2226@2|Bacteria,4NEDR@976|Bacteroidetes,47JXK@768503|Cytophagia	976|Bacteroidetes	H	Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2)	menG	-	2.1.1.163,2.1.1.201	ko:K03183	ko00130,ko01100,ko01110,map00130,map01100,map01110	M00116,M00117	R04990,R04993,R06859,R08774,R09736	RC00003,RC01253,RC01662	ko00000,ko00001,ko00002,ko01000	-	-	-	Ubie_methyltran
BYD3_k127_709432_4	1237149.C900_03751	5.785e-80	273.0	2C52N@1|root,2Z7U1@2|Bacteria,4NEZW@976|Bacteroidetes,47PC8@768503|Cytophagia	976|Bacteroidetes	S	Outer membrane protein beta-barrel domain	porT	-	-	-	-	-	-	-	-	-	-	-	OMP_b-brl_2
BYD3_k127_709432_2	1270193.JARP01000001_gene3540	3.499e-107	353.0	COG4221@1|root,COG4221@2|Bacteria,4NE1R@976|Bacteroidetes,1HY5P@117743|Flavobacteriia,2NSJY@237|Flavobacterium	976|Bacteroidetes	S	Belongs to the short-chain dehydrogenases reductases (SDR) family	ydfG	-	-	-	-	-	-	-	-	-	-	-	adh_short
BYD3_k127_709432_6	1237149.C900_03753	5.773e-64	225.0	COG0400@1|root,COG0400@2|Bacteria,4NHWT@976|Bacteroidetes,47QUH@768503|Cytophagia	976|Bacteroidetes	S	PFAM phospholipase Carboxylesterase	-	-	-	-	-	-	-	-	-	-	-	-	Abhydrolase_2,FSH1
BYD3_k127_709432_7	1237149.C900_03754	1.787e-54	194.0	2EFJ6@1|root,339BJ@2|Bacteria,4NUYU@976|Bacteroidetes,47VMH@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_709432_1	1237149.C900_03755	1.415e-135	437.0	29N3N@1|root,3091D@2|Bacteria,4NNZB@976|Bacteroidetes,47PVZ@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_709432_8	1237149.C900_03756	6.733e-54	196.0	COG0842@1|root,COG1131@1|root,COG0842@2|Bacteria,COG1131@2|Bacteria,4NHPD@976|Bacteroidetes,47KQD@768503|Cytophagia	976|Bacteroidetes	V	ABC-2 type transporter	-	-	-	ko:K21397	-	-	-	-	ko00000,ko02000	3.A.1	-	-	ABC2_membrane,ABC_tran,TerB
BYD3_k127_7119493_1	1279009.ADICEAN_00932	3.995e-106	348.0	COG0740@1|root,COG0740@2|Bacteria,4NK03@976|Bacteroidetes	976|Bacteroidetes	OU	Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins	-	-	3.4.21.92	ko:K01358	ko04112,ko04212,map04112,map04212	-	-	-	ko00000,ko00001,ko01000,ko01002	-	-	-	CLP_protease
BYD3_k127_7119493_3	760192.Halhy_1530	8.38e-56	203.0	COG1595@1|root,COG1595@2|Bacteria,4NQJE@976|Bacteroidetes,1ISX5@117747|Sphingobacteriia	976|Bacteroidetes	K	SPTR RNA polymerase, sigma-24 subunit, ECF subfamily	-	-	-	-	-	-	-	-	-	-	-	-	Sigma70_r2
BYD3_k127_7119493_2	760192.Halhy_4155	2.248e-92	322.0	COG0412@1|root,COG0412@2|Bacteria	2|Bacteria	Q	carboxymethylenebutenolidase activity	-	-	3.1.1.45	ko:K01061	ko00361,ko00364,ko00623,ko01100,ko01110,ko01120,ko01130,map00361,map00364,map00623,map01100,map01110,map01120,map01130	-	R03893,R05510,R05511,R06835,R06838,R08120,R08121,R09136,R09220,R09222	RC01018,RC01906,RC01907,RC02441,RC02467,RC02468,RC02674,RC02675,RC02686	ko00000,ko00001,ko01000	-	-	-	Asp_protease_2,BAAT_C,DLH
BYD3_k127_7119493_0	761193.Runsl_0251	1.051e-168	538.0	COG0738@1|root,COG0738@2|Bacteria,4NEYR@976|Bacteroidetes,47K7Q@768503|Cytophagia	976|Bacteroidetes	G	Major Facilitator Superfamily	fucP	-	-	ko:K02429	-	-	-	-	ko00000,ko02000	2.A.1.7	-	-	MFS_1
BYD3_k127_7119493_5	1123070.KB899247_gene1420	5.279e-05	54.0	COG0671@1|root,COG0671@2|Bacteria	2|Bacteria	I	phosphatidate phosphatase activity	-	GO:0003674,GO:0003824,GO:0005975,GO:0006629,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009605,GO:0009607,GO:0009987,GO:0016051,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0019637,GO:0042578,GO:0043207,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044403,GO:0044413,GO:0044415,GO:0044419,GO:0046467,GO:0046493,GO:0050896,GO:0051701,GO:0051704,GO:0051707,GO:0051832,GO:0051834,GO:0052173,GO:0052200,GO:0071704,GO:0075136,GO:0090407,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509	3.6.1.27	ko:K19302	ko00550,map00550	-	R05627	RC00002	ko00000,ko00001,ko01000,ko01011	-	-	-	LPG_synthase_TM,PAP2
BYD3_k127_7119493_4	926562.Oweho_1034	1.928e-20	94.0	COG4775@1|root,COG4775@2|Bacteria	2|Bacteria	M	membrane organization	-	-	-	-	-	-	-	-	-	-	-	-	Bac_surface_Ag
BYD3_k127_7124889_0	1123393.KB891326_gene42	0.0	2600.0	COG3459@1|root,COG3459@2|Bacteria,1MVNX@1224|Proteobacteria,2VKDG@28216|Betaproteobacteria,1KSRI@119069|Hydrogenophilales	119069|Hydrogenophilales	G	Glycosyl hydrolase 36 superfamily, catalytic domain	-	-	-	-	-	-	-	-	-	-	-	-	Glyco_hydro_36,Glyco_transf_36,Glycoamylase
BYD3_k127_7124889_11	700598.Niako_5826	1.354e-22	103.0	COG0745@1|root,COG0745@2|Bacteria	700598.Niako_5826|-	T	phosphorelay signal transduction system	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_7124889_2	869213.JCM21142_93455	4.087e-182	579.0	COG0027@1|root,COG0027@2|Bacteria,4PKAW@976|Bacteroidetes	976|Bacteroidetes	F	Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate	purT	-	2.1.2.2	ko:K08289	ko00230,ko00670,ko01100,ko01110,ko01130,map00230,map00670,map01100,map01110,map01130	M00048	R04325,R04326	RC00026,RC00197,RC01128	ko00000,ko00001,ko00002,ko01000	-	-	-	ATP-grasp,Epimerase
BYD3_k127_7124889_1	313606.M23134_05475	0.0	2175.0	COG2373@1|root,COG2373@2|Bacteria,4NED2@976|Bacteroidetes,47MEM@768503|Cytophagia	976|Bacteroidetes	S	Alpha-2-macroglobulin family	-	-	-	-	-	-	-	-	-	-	-	-	A2M,A2M_N,A2M_N_2,CarbopepD_reg_2,Plug
BYD3_k127_7124889_3	1237149.C900_00613	5.9e-161	511.0	COG3958@1|root,COG3958@2|Bacteria,4NEI8@976|Bacteroidetes,47JQN@768503|Cytophagia	976|Bacteroidetes	G	PFAM Transketolase, C-terminal domain	dxs	-	2.2.1.1	ko:K00615	ko00030,ko00710,ko01051,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00710,map01051,map01100,map01110,map01120,map01130,map01200,map01230	M00004,M00007,M00165,M00167	R01067,R01641,R01830,R06590	RC00032,RC00226,RC00571,RC01560	ko00000,ko00001,ko00002,ko01000	-	-	-	Transket_pyr,Transketolase_C
BYD3_k127_7124889_6	1237149.C900_00612	7.591e-136	446.0	COG2304@1|root,COG2304@2|Bacteria,4NJF1@976|Bacteroidetes,47MRQ@768503|Cytophagia	976|Bacteroidetes	S	PFAM von Willebrand factor type A domain	-	-	-	ko:K07114	-	-	-	-	ko00000,ko02000	1.A.13.2.2,1.A.13.2.3	-	-	VWA,VWA_2
BYD3_k127_7124889_5	643867.Ftrac_0981	1.037e-142	456.0	COG3959@1|root,COG3959@2|Bacteria,4NDWK@976|Bacteroidetes,47JJD@768503|Cytophagia	976|Bacteroidetes	G	PFAM Transketolase, thiamine diphosphate binding domain	-	-	2.2.1.1	ko:K00615	ko00030,ko00710,ko01051,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00710,map01051,map01100,map01110,map01120,map01130,map01200,map01230	M00004,M00007,M00165,M00167	R01067,R01641,R01830,R06590	RC00032,RC00226,RC00571,RC01560	ko00000,ko00001,ko00002,ko01000	-	-	-	Transketolase_N
BYD3_k127_7124889_8	1237149.C900_05652	1.657e-67	234.0	COG1225@1|root,COG1225@2|Bacteria,4NNGK@976|Bacteroidetes,47PUA@768503|Cytophagia	976|Bacteroidetes	O	PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen	bcp	-	1.11.1.15	ko:K03564	-	-	-	-	ko00000,ko01000	-	-	-	AhpC-TSA
BYD3_k127_7124889_4	1237149.C900_00938	1.077e-156	516.0	COG0739@1|root,COG0739@2|Bacteria,4NED7@976|Bacteroidetes,47JZB@768503|Cytophagia	976|Bacteroidetes	M	PFAM Peptidase family M23	-	-	-	-	-	-	-	-	-	-	-	-	Peptidase_M23
BYD3_k127_7124889_9	1122179.KB890418_gene3749	2.914e-62	220.0	COG0179@1|root,COG0179@2|Bacteria,4NGCT@976|Bacteroidetes,1INU6@117747|Sphingobacteriia	976|Bacteroidetes	Q	PFAM fumarylacetoacetate (FAA) hydrolase	fahA	-	-	-	-	-	-	-	-	-	-	-	FAA_hydrolase
BYD3_k127_7124889_7	1237149.C900_00936	3.087e-110	362.0	COG4783@1|root,COG4783@2|Bacteria,4PKN7@976|Bacteroidetes,47YC0@768503|Cytophagia	976|Bacteroidetes	S	Peptidase family M48	-	-	-	-	-	-	-	-	-	-	-	-	Peptidase_M48
BYD3_k127_7124889_10	402612.FP1747	5.717e-28	119.0	COG3358@1|root,COG3358@2|Bacteria,4NNWJ@976|Bacteroidetes,1I2RJ@117743|Flavobacteriia,2NUQ6@237|Flavobacterium	976|Bacteroidetes	S	Protein of unknown function (DUF1684)	-	-	-	ko:K09164	-	-	-	-	ko00000	-	-	-	DUF1684
BYD3_k127_7126452_3	1279009.ADICEAN_02289	7.628e-24	100.0	COG0488@1|root,COG0488@2|Bacteria,4NG1W@976|Bacteroidetes,47JG7@768503|Cytophagia	976|Bacteroidetes	S	COGs COG0488 ATPase components of ABC transporter with duplicated ATPase domains	-	-	-	ko:K06158	-	-	-	-	ko00000,ko03012	-	-	-	ABC_tran,ABC_tran_Xtn
BYD3_k127_7126452_0	1237149.C900_03907	5.15e-246	782.0	COG0577@1|root,COG0577@2|Bacteria,4NDUK@976|Bacteroidetes,47JJN@768503|Cytophagia	976|Bacteroidetes	V	FtsX-like permease family	-	-	-	-	-	-	-	-	-	-	-	-	FtsX,MacB_PCD
BYD3_k127_7126452_4	313606.M23134_03066	1.992e-13	77.0	COG0653@1|root,COG0653@2|Bacteria	2|Bacteria	U	protein targeting	secA	GO:0000166,GO:0003674,GO:0003824,GO:0005215,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005887,GO:0006810,GO:0008104,GO:0008144,GO:0008150,GO:0008320,GO:0008565,GO:0015031,GO:0015399,GO:0015405,GO:0015440,GO:0015450,GO:0015462,GO:0015833,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0022804,GO:0022857,GO:0022884,GO:0030554,GO:0031224,GO:0031226,GO:0031522,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0033036,GO:0033220,GO:0035639,GO:0036094,GO:0042623,GO:0042626,GO:0042886,GO:0042887,GO:0043167,GO:0043168,GO:0043492,GO:0043952,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0045184,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071806,GO:0071944,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:1904680	-	ko:K03070	ko02024,ko03060,ko03070,map02024,map03060,map03070	M00335	-	-	ko00000,ko00001,ko00002,ko02044	3.A.5.1,3.A.5.10,3.A.5.2,3.A.5.4	-	-	Helicase_C,SEC-C,SecA_DEAD,SecA_PP_bind,SecA_SW
BYD3_k127_7126452_1	1123248.KB893325_gene1223	1.198e-239	753.0	COG2010@1|root,COG2133@1|root,COG2010@2|Bacteria,COG2133@2|Bacteria,4NIKG@976|Bacteroidetes,1IWUH@117747|Sphingobacteriia	976|Bacteroidetes	C	Glucose / Sorbosone dehydrogenase	-	-	-	-	-	-	-	-	-	-	-	-	Cytochrom_C,GSDH
BYD3_k127_7126452_2	1207058.L53_10020	1.425e-28	117.0	COG0147@1|root,COG0147@2|Bacteria,1MVBJ@1224|Proteobacteria,2TRWB@28211|Alphaproteobacteria,43WQ8@69657|Hyphomonadaceae	28211|Alphaproteobacteria	E	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia	trpE	-	4.1.3.27	ko:K01657	ko00400,ko00405,ko01100,ko01110,ko01130,ko01230,ko02024,ko02025,map00400,map00405,map01100,map01110,map01130,map01230,map02024,map02025	M00023	R00985,R00986	RC00010,RC02148,RC02414	ko00000,ko00001,ko00002,ko01000	-	-	-	Anth_synt_I_N,Chorismate_bind
BYD3_k127_7131859_0	1121875.KB907551_gene970	1.944e-154	495.0	COG1649@1|root,COG1649@2|Bacteria	2|Bacteria	F	PFAM Uncharacterised BCR, COG1649	-	-	-	-	-	-	-	-	-	-	-	-	GHL10,Polysacc_deac_1
BYD3_k127_7131859_4	1233950.IW22_17905	2.389e-81	280.0	COG4783@1|root,COG4783@2|Bacteria,4NJ2X@976|Bacteroidetes,1I05N@117743|Flavobacteriia,3ZT3R@59732|Chryseobacterium	976|Bacteroidetes	S	Tetratricopeptide repeat	-	-	-	-	-	-	-	-	-	-	-	-	TPR_2,TPR_8
BYD3_k127_7131859_1	1121373.KB903643_gene3578	8.009e-116	379.0	COG3865@1|root,COG3865@2|Bacteria,4NE70@976|Bacteroidetes,47PVI@768503|Cytophagia	976|Bacteroidetes	S	3-demethylubiquinone-9 3-methyltransferase	-	-	-	-	-	-	-	-	-	-	-	-	3-dmu-9_3-mt
BYD3_k127_7131859_5	1121373.KB903643_gene3577	3.537e-80	274.0	COG2207@1|root,COG2207@2|Bacteria,4NHYH@976|Bacteroidetes,47PS3@768503|Cytophagia	976|Bacteroidetes	K	helix_turn_helix, arabinose operon control protein	-	-	-	-	-	-	-	-	-	-	-	-	HTH_18
BYD3_k127_7131859_3	1121957.ATVL01000012_gene848	2.663e-83	282.0	COG0363@1|root,COG0363@2|Bacteria,4NGB9@976|Bacteroidetes,47KK9@768503|Cytophagia	976|Bacteroidetes	G	Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase	pgl	-	3.1.1.31	ko:K01057	ko00030,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map01100,map01110,map01120,map01130,map01200	M00004,M00006,M00008	R02035	RC00537	ko00000,ko00001,ko00002,ko01000	-	-	-	Glucosamine_iso
BYD3_k127_7131859_2	1121287.AUMU01000011_gene665	1.413e-106	355.0	COG0793@1|root,COG0793@2|Bacteria,4NEK8@976|Bacteroidetes,1HYIK@117743|Flavobacteriia,3ZPH1@59732|Chryseobacterium	976|Bacteroidetes	M	Peptidase family S41	-	-	-	-	-	-	-	-	-	-	-	-	Peptidase_S41
BYD3_k127_7152779_1	1237149.C900_03868	1.835e-111	363.0	COG0542@1|root,COG0542@2|Bacteria,4NE1J@976|Bacteroidetes,47JFM@768503|Cytophagia	976|Bacteroidetes	O	Belongs to the ClpA ClpB family	clpC	-	-	ko:K03696	ko01100,map01100	-	-	-	ko00000,ko03110	-	-	-	AAA,AAA_2,ClpB_D2-small,Clp_N,UVR
BYD3_k127_7152779_7	1237149.C900_03869	4.638e-57	207.0	COG0224@1|root,COG0224@2|Bacteria,4NM5H@976|Bacteroidetes,47Q4T@768503|Cytophagia	976|Bacteroidetes	C	PFAM WbqC-like protein family	-	-	-	-	-	-	-	-	-	-	-	-	WbqC
BYD3_k127_7152779_5	1237149.C900_03870	4.946e-84	283.0	COG0009@1|root,COG0009@2|Bacteria,4NDZR@976|Bacteroidetes,47KWK@768503|Cytophagia	976|Bacteroidetes	J	Belongs to the SUA5 family	yciO	-	-	-	-	-	-	-	-	-	-	-	Sua5_yciO_yrdC
BYD3_k127_7152779_0	1237149.C900_03871	8.824e-135	437.0	COG1559@1|root,COG1559@2|Bacteria,4NG17@976|Bacteroidetes,47J93@768503|Cytophagia	976|Bacteroidetes	S	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation	mltG	-	-	ko:K07082	-	-	-	-	ko00000	-	-	-	YceG
BYD3_k127_7152779_8	641524.ADICYQ_0010	3.192e-50	182.0	COG0824@1|root,COG0824@2|Bacteria,4NQGW@976|Bacteroidetes,47Q99@768503|Cytophagia	976|Bacteroidetes	S	TIGRFAM acyl-CoA thioester hydrolase, YbgC YbaW family	ybgC	-	-	ko:K07107	-	-	-	-	ko00000,ko01000	-	-	-	4HBT,4HBT_2
BYD3_k127_7152779_2	1237149.C900_03873	6.559e-105	349.0	COG1295@1|root,COG1295@2|Bacteria,4NFY6@976|Bacteroidetes,47KA8@768503|Cytophagia	976|Bacteroidetes	S	TIGRFAM YihY family protein (not ribonuclease BN)	yfkH	-	-	ko:K07058	-	-	-	-	ko00000	-	-	-	Virul_fac_BrkB
BYD3_k127_7152779_9	1237149.C900_03174	2.906e-32	134.0	COG5608@1|root,COG5608@2|Bacteria,4NVQ5@976|Bacteroidetes	976|Bacteroidetes	S	Late embryogenesis abundant protein	-	-	-	-	-	-	-	-	-	-	-	-	LEA_2
BYD3_k127_7152779_6	1124780.ANNU01000043_gene339	6.466e-70	242.0	COG3751@1|root,COG3751@2|Bacteria,4NFPS@976|Bacteroidetes,47MBX@768503|Cytophagia	976|Bacteroidetes	O	Prolyl 4-hydroxylase alpha subunit homologues.	-	-	-	ko:K07394	-	-	-	-	ko00000	-	-	-	2OG-FeII_Oxy_3,2OG-FeII_Oxy_4
BYD3_k127_7152779_10	1237149.C900_00817	9.662e-32	130.0	COG2318@1|root,COG2318@2|Bacteria,4NSE5@976|Bacteroidetes,47S2U@768503|Cytophagia	976|Bacteroidetes	S	DinB family	-	-	-	-	-	-	-	-	-	-	-	-	DinB
BYD3_k127_7152779_4	714943.Mucpa_3681	1.129e-84	289.0	COG0412@1|root,COG0412@2|Bacteria,4NE8V@976|Bacteroidetes,1IS6I@117747|Sphingobacteriia	976|Bacteroidetes	Q	PFAM Dienelactone hydrolase family	-	-	3.1.1.45	ko:K01061	ko00361,ko00364,ko00623,ko01100,ko01110,ko01120,ko01130,map00361,map00364,map00623,map01100,map01110,map01120,map01130	-	R03893,R05510,R05511,R06835,R06838,R08120,R08121,R09136,R09220,R09222	RC01018,RC01906,RC01907,RC02441,RC02467,RC02468,RC02674,RC02675,RC02686	ko00000,ko00001,ko01000	-	-	-	DLH
BYD3_k127_7152779_3	1484460.JSWG01000011_gene1711	5.435e-95	317.0	COG1022@1|root,COG1022@2|Bacteria,4NEA4@976|Bacteroidetes,1I7ZI@117743|Flavobacteriia	976|Bacteroidetes	I	AMP-binding enzyme	-	-	-	-	-	-	-	-	-	-	-	-	AMP-binding
BYD3_k127_717383_3	1237149.C900_05665	7.467e-73	248.0	COG1522@1|root,COG1522@2|Bacteria,4NHG9@976|Bacteroidetes,47PXD@768503|Cytophagia	976|Bacteroidetes	K	helix_turn_helix ASNC type	asnC	-	-	ko:K03718	-	-	-	-	ko00000,ko03000	-	-	-	AsnC_trans_reg,HTH_24,HTH_AsnC-type
BYD3_k127_717383_0	1237149.C900_05664	5.995e-282	869.0	COG0719@1|root,COG0719@2|Bacteria,4NFXH@976|Bacteroidetes,47JZJ@768503|Cytophagia	976|Bacteroidetes	O	TIGRFAM FeS assembly protein SufB	sufB	-	-	ko:K09014	-	-	-	-	ko00000	-	-	-	UPF0051
BYD3_k127_717383_2	1121904.ARBP01000016_gene5254	1.208e-128	414.0	COG0396@1|root,COG0396@2|Bacteria,4NEMY@976|Bacteroidetes,47N88@768503|Cytophagia	976|Bacteroidetes	O	TIGRFAM FeS assembly ATPase SufC	sufC	-	-	ko:K09013	-	-	-	-	ko00000,ko02000	-	-	-	ABC_tran
BYD3_k127_717383_1	1237149.C900_05661	2.4e-144	469.0	COG0719@1|root,COG0719@2|Bacteria,4NFPG@976|Bacteroidetes,47K0R@768503|Cytophagia	976|Bacteroidetes	O	TIGRFAM FeS assembly protein SufD	sufD	-	-	ko:K09015	-	-	-	-	ko00000	-	-	-	UPF0051
BYD3_k127_717383_4	1237149.C900_05660	5.843e-41	154.0	COG0520@1|root,COG0520@2|Bacteria,4NDUB@976|Bacteroidetes,47JNS@768503|Cytophagia	976|Bacteroidetes	E	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine	sufS	-	2.8.1.7,4.4.1.16	ko:K11717	ko00450,ko01100,map00450,map01100	-	R03599,R11528	RC00961,RC01789,RC02313	ko00000,ko00001,ko01000	-	-	-	Aminotran_5
BYD3_k127_7178308_5	1189612.A33Q_0138	8.279e-16	88.0	COG1404@1|root,COG3227@1|root,COG1404@2|Bacteria,COG3227@2|Bacteria,4NF1M@976|Bacteroidetes,47NC9@768503|Cytophagia	976|Bacteroidetes	O	Subtilase family	-	-	-	-	-	-	-	-	-	-	-	-	Peptidase_S8,SPOR
BYD3_k127_7178308_1	1237149.C900_02858	9.626e-105	346.0	COG2227@1|root,COG2227@2|Bacteria,4NFHE@976|Bacteroidetes,47JIB@768503|Cytophagia	976|Bacteroidetes	H	Methionine biosynthesis protein MetW	-	-	-	-	-	-	-	-	-	-	-	-	Methyltransf_11
BYD3_k127_7178308_4	1237149.C900_02857	3.278e-57	214.0	28H6U@1|root,2Z7J5@2|Bacteria,4NHUU@976|Bacteroidetes,47JR6@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_7178308_3	1434325.AZQN01000002_gene1075	1.386e-96	320.0	COG0313@1|root,COG0313@2|Bacteria,4NFQM@976|Bacteroidetes,47JDW@768503|Cytophagia	976|Bacteroidetes	H	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA	rsmI	-	2.1.1.198	ko:K07056	-	-	-	-	ko00000,ko01000,ko03009	-	-	-	TP_methylase
BYD3_k127_7178308_6	1237149.C900_01732	1.029e-15	86.0	COG0815@1|root,COG0815@2|Bacteria	2|Bacteria	M	Transfers the fatty acyl group on membrane lipoproteins	lnt	-	-	ko:K03820	-	-	-	-	ko00000,ko01000	-	GT2	-	CN_hydrolase
BYD3_k127_7178308_2	1124780.ANNU01000005_gene2362	1e-98	330.0	COG0483@1|root,COG0483@2|Bacteria,4NI6D@976|Bacteroidetes,47K2K@768503|Cytophagia	976|Bacteroidetes	G	Inositol monophosphatase	suhB	-	3.1.3.25	ko:K01092	ko00521,ko00562,ko01100,ko04070,map00521,map00562,map01100,map04070	M00131	R01185,R01186,R01187	RC00078	ko00000,ko00001,ko00002,ko01000	-	-	-	Inositol_P
BYD3_k127_7178308_0	1267211.KI669560_gene2058	2.316e-182	582.0	COG0612@1|root,COG0612@2|Bacteria,4NFY0@976|Bacteroidetes,1IP4P@117747|Sphingobacteriia	976|Bacteroidetes	S	Peptidase M16	-	-	-	ko:K07263	-	-	-	-	ko00000,ko01000,ko01002	-	-	-	Peptidase_M16,Peptidase_M16_C
BYD3_k127_7190766_7	657309.BXY_32370	9.002e-20	95.0	COG4225@1|root,COG4225@2|Bacteria,4NH7G@976|Bacteroidetes,2FPR3@200643|Bacteroidia,4AMW4@815|Bacteroidaceae	976|Bacteroidetes	E	Glycosyl Hydrolase Family 88	yteR_9	-	-	-	-	-	-	-	-	-	-	-	Glyco_hydro_88
BYD3_k127_7190766_3	743722.Sph21_1288	1.121e-66	237.0	COG2819@1|root,COG2819@2|Bacteria,4NGNJ@976|Bacteroidetes,1IZNR@117747|Sphingobacteriia	976|Bacteroidetes	S	Putative esterase	-	-	-	ko:K07017	-	-	-	-	ko00000	-	-	-	Esterase
BYD3_k127_7190766_8	1469557.JSWF01000028_gene2786	1.623e-06	52.0	arCOG07533@1|root,2ZF5I@2|Bacteria,4NMWZ@976|Bacteroidetes,1II7Y@117743|Flavobacteriia	976|Bacteroidetes	S	Domain of unknown function (DUF4386)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4386
BYD3_k127_7190766_6	643867.Ftrac_2626	1.574e-52	212.0	COG4251@1|root,COG4372@1|root,COG4251@2|Bacteria,COG4372@2|Bacteria,4NP5A@976|Bacteroidetes,47PX4@768503|Cytophagia	976|Bacteroidetes	T	7TM diverse intracellular signalling	-	-	-	-	-	-	-	-	-	-	-	-	7TMR-DISMED2,7TMR-DISM_7TM,HATPase_c
BYD3_k127_7190766_2	1239962.C943_01643	4.094e-83	298.0	2C1SZ@1|root,349KI@2|Bacteria,4P55S@976|Bacteroidetes	976|Bacteroidetes	S	WG containing repeat	-	-	-	-	-	-	-	-	-	-	-	-	WG_beta_rep,YARHG
BYD3_k127_7190766_5	1239962.C943_01642	1.721e-54	198.0	COG5395@1|root,COG5395@2|Bacteria,4NMDY@976|Bacteroidetes,47RKE@768503|Cytophagia	976|Bacteroidetes	S	Predicted membrane protein (DUF2306)	-	-	-	-	-	-	-	-	-	-	-	-	DUF2306
BYD3_k127_7190766_0	1379270.AUXF01000001_gene1915	3.864e-222	700.0	COG1502@1|root,COG1502@2|Bacteria	2|Bacteria	I	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol	CP_0318	-	-	ko:K06131,ko:K06132	ko00564,ko01100,map00564,map01100	-	R07390,R11062	RC00017	ko00000,ko00001,ko01000	-	-	-	PLDc_2
BYD3_k127_7190766_4	471854.Dfer_1959	4.289e-57	203.0	COG2318@1|root,COG2318@2|Bacteria,4NNRD@976|Bacteroidetes,47PZE@768503|Cytophagia	976|Bacteroidetes	S	DinB family	-	-	-	-	-	-	-	-	-	-	-	-	DinB
BYD3_k127_7190766_1	1237149.C900_01904	2.799e-145	479.0	COG0642@1|root,COG2205@2|Bacteria,4NTSQ@976|Bacteroidetes	976|Bacteroidetes	T	His Kinase A (phosphoacceptor) domain	-	-	-	-	-	-	-	-	-	-	-	-	HATPase_c
BYD3_k127_7198231_0	1123276.KB893312_gene2977	4.822e-158	503.0	COG1063@1|root,COG1063@2|Bacteria,4NHCK@976|Bacteroidetes,47K5V@768503|Cytophagia	976|Bacteroidetes	E	alcohol dehydrogenase	-	-	-	-	-	-	-	-	-	-	-	-	ADH_N,ADH_zinc_N
BYD3_k127_7198231_3	1123278.KB893400_gene4065	3.679e-100	335.0	COG1082@1|root,COG1082@2|Bacteria,4NKFY@976|Bacteroidetes,47N9K@768503|Cytophagia	976|Bacteroidetes	G	Xylose isomerase domain protein TIM barrel	-	-	-	-	-	-	-	-	-	-	-	-	AP_endonuc_2
BYD3_k127_7198231_2	1123277.KB893172_gene703	5.28e-107	355.0	COG0327@1|root,COG0327@2|Bacteria,4NFJ3@976|Bacteroidetes,47NXF@768503|Cytophagia	976|Bacteroidetes	S	NIF3 (NGG1p interacting factor 3)	-	-	-	-	-	-	-	-	-	-	-	-	NIF3
BYD3_k127_7198231_1	761193.Runsl_2755	2.981e-138	444.0	COG0627@1|root,COG0627@2|Bacteria,4NGI8@976|Bacteroidetes,47M5Z@768503|Cytophagia	976|Bacteroidetes	S	Putative esterase	xynZ	-	-	-	-	-	-	-	-	-	-	-	Esterase
BYD3_k127_721000_0	1123277.KB893210_gene2872	1.053e-126	410.0	COG3394@1|root,COG3394@2|Bacteria,4PNAT@976|Bacteroidetes,47TGM@768503|Cytophagia	976|Bacteroidetes	G	YdjC-like protein	-	-	3.5.1.105	ko:K03478	-	-	-	-	ko00000,ko01000	-	-	-	YdjC
BYD3_k127_721000_2	925409.KI911562_gene176	4.028e-116	380.0	COG1028@1|root,COG1028@2|Bacteria,4NH1Y@976|Bacteroidetes,1ISQU@117747|Sphingobacteriia	976|Bacteroidetes	IQ	KR domain	-	-	1.1.1.47	ko:K00034	ko00030,ko01120,ko01200,map00030,map01120,map01200	-	R01520,R01521	RC00066	ko00000,ko00001,ko01000	-	-	-	adh_short_C2
BYD3_k127_721000_1	1519464.HY22_05320	4.086e-123	397.0	COG2334@1|root,COG2334@2|Bacteria	2|Bacteria	S	homoserine kinase activity	-	-	2.7.1.39	ko:K02204	ko00260,ko01100,ko01110,ko01120,ko01230,map00260,map01100,map01110,map01120,map01230	M00018	R01771	RC00002,RC00017	ko00000,ko00001,ko00002,ko01000	-	-	-	APH,Glyco_hydro_63
BYD3_k127_721077_5	1121904.ARBP01000008_gene3384	3.446e-14	78.0	COG0642@1|root,COG2203@1|root,COG2203@2|Bacteria,COG2205@2|Bacteria,4P2BP@976|Bacteroidetes	976|Bacteroidetes	T	signal transduction histidine kinase	-	-	-	-	-	-	-	-	-	-	-	-	HATPase_c,HisKA
BYD3_k127_721077_3	1550091.JROE01000002_gene1058	3.438e-45	171.0	COG2411@1|root,COG2411@2|Bacteria,4P3GU@976|Bacteroidetes	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_721077_1	153721.MYP_431	6.786e-129	417.0	COG2230@1|root,COG2230@2|Bacteria,4NHFT@976|Bacteroidetes,47MHX@768503|Cytophagia	976|Bacteroidetes	M	Mycolic acid cyclopropane synthetase	-	-	2.1.1.79	ko:K00574	-	-	-	-	ko00000,ko01000	-	-	-	CMAS
BYD3_k127_721077_6	468059.AUHA01000002_gene85	4.351e-08	60.0	2EC83@1|root,3366K@2|Bacteria,4NWPR@976|Bacteroidetes,1ITW7@117747|Sphingobacteriia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_721077_4	991.IW20_17020	1.38e-15	78.0	COG2152@1|root,COG2152@2|Bacteria,4NG76@976|Bacteroidetes,1HY5D@117743|Flavobacteriia,2NTQP@237|Flavobacterium	976|Bacteroidetes	G	glycosidase	-	-	-	-	-	-	-	-	-	-	-	-	Glyco_hydro_130
BYD3_k127_721077_0	742766.HMPREF9455_01487	1.596e-157	504.0	COG2152@1|root,COG2152@2|Bacteria,4NGI7@976|Bacteroidetes,2FMV9@200643|Bacteroidia,22X5I@171551|Porphyromonadaceae	976|Bacteroidetes	G	Pfam:DUF377	-	-	2.4.1.339,2.4.1.340	ko:K20885	-	-	R11397,R11398	RC00049,RC02748	ko00000,ko01000	-	GH130	-	Glyco_hydro_130
BYD3_k127_721077_2	1189612.A33Q_0841	9.833e-121	394.0	COG0568@1|root,COG0568@2|Bacteria,4NEBF@976|Bacteroidetes,47JZ7@768503|Cytophagia	976|Bacteroidetes	K	Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released	rpoD	-	-	ko:K03086	-	-	-	-	ko00000,ko03021	-	-	-	Sigma70_r1_2,Sigma70_r2,Sigma70_r3,Sigma70_r4
BYD3_k127_721077_8	1168034.FH5T_15540	1.183e-05	49.0	2DFUX@1|root,2ZT8Y@2|Bacteria,4P92B@976|Bacteroidetes	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_7227085_0	1122176.KB903576_gene4886	1.383e-186	587.0	COG1228@1|root,COG1228@2|Bacteria,4NISN@976|Bacteroidetes,1J19G@117747|Sphingobacteriia	976|Bacteroidetes	Q	Amidohydrolase family	-	-	-	-	-	-	-	-	-	-	-	-	Amidohydro_1
BYD3_k127_7227085_1	1121904.ARBP01000002_gene6731	7.9e-169	567.0	COG0642@1|root,COG0745@1|root,COG3292@1|root,COG0745@2|Bacteria,COG2205@2|Bacteria,COG3292@2|Bacteria,4NDXU@976|Bacteroidetes,47JBS@768503|Cytophagia	976|Bacteroidetes	T	Two component regulator propeller	-	-	-	-	-	-	-	-	-	-	-	-	HATPase_c,HTH_18,HisKA,Reg_prop,Response_reg,Y_Y_Y
BYD3_k127_7229415_2	1237149.C900_01986	5.974e-10	62.0	COG0489@1|root,COG3206@1|root,COG0489@2|Bacteria,COG3206@2|Bacteria,4NHKC@976|Bacteroidetes,47K54@768503|Cytophagia	976|Bacteroidetes	M	protein involved in exopolysaccharide biosynthesis	-	-	-	-	-	-	-	-	-	-	-	-	AAA_31,Wzz
BYD3_k127_7229415_0	1237149.C900_01985	1.676e-83	292.0	COG2885@1|root,COG2885@2|Bacteria,4NEND@976|Bacteroidetes,47KG7@768503|Cytophagia	976|Bacteroidetes	M	Belongs to the ompA family	-	-	-	-	-	-	-	-	-	-	-	-	OmpA,PD40
BYD3_k127_7229415_1	929556.Solca_0773	2.485e-34	145.0	COG3064@1|root,COG3064@2|Bacteria,4NM6Q@976|Bacteroidetes,1ISEP@117747|Sphingobacteriia	976|Bacteroidetes	M	Type IX secretion system membrane protein PorP/SprF	-	-	-	-	-	-	-	-	-	-	-	-	PorP_SprF
BYD3_k127_7229628_1	1237149.C900_03437	1.094e-111	378.0	COG1196@1|root,COG1196@2|Bacteria,4NF7P@976|Bacteroidetes,47NNE@768503|Cytophagia	976|Bacteroidetes	D	nuclear chromosome segregation	-	-	-	-	-	-	-	-	-	-	-	-	DUF4175
BYD3_k127_7229628_3	1237149.C900_03435	5.862e-60	208.0	29D8R@1|root,3006P@2|Bacteria,4NNGD@976|Bacteroidetes,47R44@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_7229628_4	1124780.ANNU01000015_gene1989	5.109e-47	171.0	COG0599@1|root,COG0599@2|Bacteria,4NNRB@976|Bacteroidetes,47QTE@768503|Cytophagia	976|Bacteroidetes	S	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity	-	-	-	-	-	-	-	-	-	-	-	-	CMD
BYD3_k127_7229628_2	926549.KI421517_gene1047	7.947e-69	241.0	COG1040@1|root,COG1040@2|Bacteria,4NNI1@976|Bacteroidetes,47PYN@768503|Cytophagia	976|Bacteroidetes	S	TIGRFAM comF family protein	comF	-	2.4.2.14	ko:K00764	ko00230,ko00250,ko01100,ko01110,ko01130,map00230,map00250,map01100,map01110,map01130	M00048	R01072	RC00010,RC02724,RC02752	ko00000,ko00001,ko00002,ko01000,ko01002	-	-	-	Pribosyltran
BYD3_k127_7229628_0	1237149.C900_00922	4.32e-226	706.0	COG1262@1|root,COG1262@2|Bacteria,4NE51@976|Bacteroidetes,47JSB@768503|Cytophagia	976|Bacteroidetes	S	TIGRFAM gliding motility-associated lipoprotein GldJ	gldJ	-	-	-	-	-	-	-	-	-	-	-	FGE-sulfatase
BYD3_k127_7247925_4	927658.AJUM01000040_gene927	7.97e-19	90.0	COG0707@1|root,COG0707@2|Bacteria,4NE6D@976|Bacteroidetes,2FMND@200643|Bacteroidia,3XJKT@558415|Marinilabiliaceae	976|Bacteroidetes	M	Glycosyltransferase family 28 N-terminal domain	murG	-	2.4.1.227	ko:K02563	ko00550,ko01100,ko01502,ko04112,map00550,map01100,map01502,map04112	-	R05032,R05662	RC00005,RC00049	ko00000,ko00001,ko01000,ko01011	-	GT28	-	Glyco_tran_28_C,Glyco_transf_28
BYD3_k127_7247925_1	1237149.C900_02230	1.077e-165	533.0	COG0773@1|root,COG0773@2|Bacteria,4NE1V@976|Bacteroidetes,47KY0@768503|Cytophagia	976|Bacteroidetes	M	Belongs to the MurCDEF family	murC	-	6.3.2.8	ko:K01924	ko00471,ko00550,ko01100,map00471,map00550,map01100	-	R03193	RC00064,RC00141	ko00000,ko00001,ko01000,ko01011	-	-	-	Mur_ligase,Mur_ligase_C,Mur_ligase_M
BYD3_k127_7247925_2	1237149.C900_02229	1.736e-79	272.0	COG1589@1|root,COG1589@2|Bacteria,4NGPN@976|Bacteroidetes,47PU4@768503|Cytophagia	976|Bacteroidetes	M	Cell division protein	ftsQ	-	-	ko:K03589	ko04112,map04112	-	-	-	ko00000,ko00001,ko03036	-	-	-	FtsQ
BYD3_k127_7247925_0	1237149.C900_02228	1.576e-224	701.0	COG0849@1|root,COG0849@2|Bacteria,4NE0V@976|Bacteroidetes,47K6I@768503|Cytophagia	976|Bacteroidetes	D	Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring	ftsA	-	-	ko:K03590	ko04112,map04112	-	-	-	ko00000,ko00001,ko03036,ko04812	-	-	-	FtsA,SHS2_FTSA
BYD3_k127_7247925_3	1268237.G114_05780	5.187e-70	243.0	COG0206@1|root,COG0206@2|Bacteria,1MV2X@1224|Proteobacteria,1RPZS@1236|Gammaproteobacteria,1Y3K1@135624|Aeromonadales	135624|Aeromonadales	D	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity	ftsZ	-	-	ko:K03531	ko04112,map04112	-	-	-	ko00000,ko00001,ko02048,ko03036,ko04812	-	-	-	FtsZ_C,Tubulin
BYD3_k127_7262056_5	1237149.C900_04598	1.869e-52	189.0	COG1664@1|root,COG1664@2|Bacteria,4NUZA@976|Bacteroidetes,47RT9@768503|Cytophagia	976|Bacteroidetes	M	Polymer-forming cytoskeletal	-	-	-	-	-	-	-	-	-	-	-	-	Bactofilin
BYD3_k127_7262056_3	643867.Ftrac_2563	3.647e-93	314.0	COG0739@1|root,COG0739@2|Bacteria,4NFZN@976|Bacteroidetes,47PPP@768503|Cytophagia	976|Bacteroidetes	M	PFAM Peptidase family M23	nlpD_1	-	-	-	-	-	-	-	-	-	-	-	Peptidase_M23
BYD3_k127_7262056_1	1237149.C900_04596	8.615e-250	797.0	COG0457@1|root,COG0457@2|Bacteria,4NDV9@976|Bacteroidetes,47K0V@768503|Cytophagia	976|Bacteroidetes	S	Tetratricopeptide repeats	sprE	-	-	-	-	-	-	-	-	-	-	-	TPR_16,TPR_6,TPR_8
BYD3_k127_7262056_0	1237149.C900_04595	0.0	1034.0	COG5009@1|root,COG5009@2|Bacteria,4NECJ@976|Bacteroidetes,47K6R@768503|Cytophagia	976|Bacteroidetes	M	Penicillin binding protein transpeptidase	pbpB	-	2.4.1.129,3.4.16.4	ko:K05366	ko00550,ko01100,ko01501,map00550,map01100,map01501	-	-	-	ko00000,ko00001,ko01000,ko01003,ko01011	-	GT51	-	Transgly,Transpeptidase
BYD3_k127_7262056_2	1237149.C900_04594	2.417e-239	752.0	COG0322@1|root,COG0322@2|Bacteria,4NE61@976|Bacteroidetes,47JXP@768503|Cytophagia	976|Bacteroidetes	L	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision	uvrC	GO:0005575,GO:0005622,GO:0005623,GO:0006950,GO:0006974,GO:0008150,GO:0009380,GO:0009987,GO:0032991,GO:0033554,GO:0044424,GO:0044464,GO:0050896,GO:0051716,GO:1902494,GO:1905347,GO:1905348,GO:1990391	-	ko:K03703	ko03420,map03420	-	-	-	ko00000,ko00001,ko03400	-	-	-	GIY-YIG,HHH_2,HHH_5,UVR,UvrC_HhH_N
BYD3_k127_7262056_4	1237149.C900_04593	6.908e-86	293.0	2C97B@1|root,2ZAEJ@2|Bacteria,4NEK0@976|Bacteroidetes,47MC2@768503|Cytophagia	976|Bacteroidetes	S	TIGRFAM gliding motility associated protien GldN	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_7262056_6	1237149.C900_04592	2.59e-44	167.0	28HG4@1|root,2Z7S0@2|Bacteria,4NE3G@976|Bacteroidetes,47JTS@768503|Cytophagia	976|Bacteroidetes	S	TIGRFAM Gliding motility-associated protein GldM	gldM	-	-	-	-	-	-	-	-	-	-	-	GldM_C,GldM_N
BYD3_k127_727756_1	1123248.KB893330_gene427	1.035e-120	394.0	2DUCG@1|root,33PYM@2|Bacteria	2|Bacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_727756_2	700598.Niako_4275	3.361e-113	369.0	COG1028@1|root,COG1028@2|Bacteria,4NF7M@976|Bacteroidetes	976|Bacteroidetes	IQ	short-chain dehydrogenase	-	-	-	-	-	-	-	-	-	-	-	-	adh_short_C2
BYD3_k127_727756_0	700598.Niako_4274	2.933e-132	428.0	COG1595@1|root,COG1595@2|Bacteria,4NMAE@976|Bacteroidetes,1IVH5@117747|Sphingobacteriia	976|Bacteroidetes	K	Helix-turn-helix domain	-	-	-	-	-	-	-	-	-	-	-	-	Sigma70_r2
BYD3_k127_727756_4	313595.P700755_004041	1.112e-80	282.0	COG2114@1|root,COG2114@2|Bacteria,4NG5A@976|Bacteroidetes,1HYY0@117743|Flavobacteriia	976|Bacteroidetes	T	Adenylate and Guanylate cyclase catalytic domain	-	-	4.6.1.1	ko:K01768	ko00230,ko02025,ko04113,ko04213,map00230,map02025,map04113,map04213	M00695	R00089,R00434	RC00295	ko00000,ko00001,ko00002,ko01000	-	-	-	Guanylate_cyc
BYD3_k127_727756_3	1123248.KB893381_gene981	4.67e-108	365.0	COG0726@1|root,COG2133@1|root,COG0726@2|Bacteria,COG2133@2|Bacteria,4PNNF@976|Bacteroidetes	976|Bacteroidetes	G	Neutral/alkaline non-lysosomal ceramidase, N-terminal	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_727756_5	1128427.KB904821_gene2031	8.82e-33	134.0	COG4421@1|root,COG4421@2|Bacteria,1G22H@1117|Cyanobacteria,1H8WY@1150|Oscillatoriales	1117|Cyanobacteria	G	TPR repeat	-	-	-	-	-	-	-	-	-	-	-	-	DUF563,TPR_1
BYD3_k127_7283387_1	471854.Dfer_0042	2.143e-157	507.0	COG1538@1|root,COG1538@2|Bacteria,4NF4X@976|Bacteroidetes,47JA0@768503|Cytophagia	976|Bacteroidetes	MU	Outer membrane efflux protein	-	-	-	-	-	-	-	-	-	-	-	-	OEP
BYD3_k127_7283387_2	1121481.AUAS01000022_gene5289	1.32e-126	416.0	COG0845@1|root,COG0845@2|Bacteria,4NIDC@976|Bacteroidetes,47M9U@768503|Cytophagia	976|Bacteroidetes	M	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family	-	-	-	ko:K03585	ko01501,ko01503,map01501,map01503	M00646,M00647,M00699,M00718	-	-	ko00000,ko00001,ko00002,ko01504,ko02000,ko03036	2.A.6.2,8.A.1.6	-	-	HlyD_D23
BYD3_k127_7283387_0	925409.KI911562_gene2351	0.0	1493.0	COG0841@1|root,COG0841@2|Bacteria,4NDZG@976|Bacteroidetes,1IPE6@117747|Sphingobacteriia	976|Bacteroidetes	V	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family	-	-	-	ko:K03296	-	-	-	-	ko00000	2.A.6.2	-	-	ACR_tran
BYD3_k127_7309404_1	743722.Sph21_4161	6.734e-58	205.0	COG1082@1|root,COG1082@2|Bacteria,4NJZQ@976|Bacteroidetes,1IVKX@117747|Sphingobacteriia	976|Bacteroidetes	G	Xylose isomerase-like TIM barrel	-	-	-	-	-	-	-	-	-	-	-	-	AP_endonuc_2
BYD3_k127_7309404_3	926559.JoomaDRAFT_2320	8.76e-37	142.0	COG0239@1|root,COG0239@2|Bacteria,4NV3N@976|Bacteroidetes,1I4DC@117743|Flavobacteriia	976|Bacteroidetes	D	Important for reducing fluoride concentration in the cell, thus reducing its toxicity	crcB	-	-	ko:K06199	-	-	-	-	ko00000,ko02000	1.A.43.1,1.A.43.2,1.A.43.3	-	-	CRCB
BYD3_k127_7309404_0	1123248.KB893338_gene2306	2.385e-137	466.0	COG0577@1|root,COG0577@2|Bacteria,4NDUK@976|Bacteroidetes,1IRGG@117747|Sphingobacteriia	976|Bacteroidetes	V	MacB-like periplasmic core domain	-	-	-	-	-	-	-	-	-	-	-	-	FtsX,MacB_PCD
BYD3_k127_7309404_2	929556.Solca_1500	5.648e-44	160.0	COG2207@1|root,COG4275@1|root,COG2207@2|Bacteria,COG4275@2|Bacteria,4NIZN@976|Bacteroidetes,1IQES@117747|Sphingobacteriia	976|Bacteroidetes	K	Chromate resistance exported protein	-	-	-	-	-	-	-	-	-	-	-	-	Chrome_Resist,HTH_18
BYD3_k127_7312686_5	509635.N824_23100	2.511e-11	64.0	COG2114@1|root,COG2114@2|Bacteria,4NG5A@976|Bacteroidetes,1IVY9@117747|Sphingobacteriia	976|Bacteroidetes	T	Adenylate and Guanylate cyclase catalytic domain	-	-	4.6.1.1	ko:K01768	ko00230,ko02025,ko04113,ko04213,map00230,map02025,map04113,map04213	M00695	R00089,R00434	RC00295	ko00000,ko00001,ko00002,ko01000	-	-	-	Guanylate_cyc
BYD3_k127_7312686_4	237368.SCABRO_03886	4.807e-29	120.0	2CCSR@1|root,32RWC@2|Bacteria,2J1M5@203682|Planctomycetes	203682|Planctomycetes	S	23S rRNA-intervening sequence protein	-	-	-	-	-	-	-	-	-	-	-	-	23S_rRNA_IVP
BYD3_k127_7312686_0	861299.J421_0563	0.0	1034.0	COG1472@1|root,COG1472@2|Bacteria	2|Bacteria	G	Belongs to the glycosyl hydrolase 3 family	-	-	3.2.1.21	ko:K05349	ko00460,ko00500,ko00940,ko01100,ko01110,map00460,map00500,map00940,map01100,map01110	-	R00026,R02558,R02887,R02985,R03527,R04949,R04998,R10035,R10039,R10040	RC00049,RC00059,RC00171,RC00262,RC00397,RC00451,RC00714,RC00746,RC01248	ko00000,ko00001,ko01000	-	GH3	-	Fn3-like,Glyco_hydro_3,Glyco_hydro_3_C,PA14
BYD3_k127_7312686_2	929562.Emtol_2157	5.122e-127	410.0	COG3828@1|root,COG3828@2|Bacteria,4NJ6A@976|Bacteroidetes,47PB3@768503|Cytophagia	976|Bacteroidetes	G	Trehalose utilisation	-	-	-	ko:K09992	-	-	-	-	ko00000	-	-	-	ThuA
BYD3_k127_7312686_3	700598.Niako_0425	1.891e-89	299.0	COG4122@1|root,COG4122@2|Bacteria,4NMF5@976|Bacteroidetes,1IWQE@117747|Sphingobacteriia	976|Bacteroidetes	S	O-methyltransferase	-	-	-	-	-	-	-	-	-	-	-	-	Methyltransf_3
BYD3_k127_7312686_1	926549.KI421517_gene2442	5.183e-192	604.0	COG0673@1|root,COG0673@2|Bacteria,4NE75@976|Bacteroidetes,47JGE@768503|Cytophagia	976|Bacteroidetes	S	Oxidoreductase domain protein	-	-	-	-	-	-	-	-	-	-	-	-	GFO_IDH_MocA,GFO_IDH_MocA_C
BYD3_k127_732818_3	1124780.ANNU01000042_gene653	3.603e-82	279.0	COG0770@1|root,COG0770@2|Bacteria,4NDWD@976|Bacteroidetes,47MCP@768503|Cytophagia	976|Bacteroidetes	M	Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein	murF	-	6.3.2.10	ko:K01929	ko00300,ko00550,ko01100,ko01502,map00300,map00550,map01100,map01502	-	R04573,R04617	RC00064,RC00141	ko00000,ko00001,ko01000,ko01011	-	-	-	Mur_ligase,Mur_ligase_C,Mur_ligase_M
BYD3_k127_732818_4	1121904.ARBP01000004_gene849	9.328e-59	211.0	COG5587@1|root,COG5587@2|Bacteria,4NNS3@976|Bacteroidetes,47J8W@768503|Cytophagia	976|Bacteroidetes	S	TIGRFAM TIGR02453 family protein	-	-	-	-	-	-	-	-	-	-	-	-	DUF2461
BYD3_k127_732818_0	1237149.C900_04608	3.434e-238	762.0	COG2982@1|root,COG2982@2|Bacteria,4NHD3@976|Bacteroidetes,47KTA@768503|Cytophagia	976|Bacteroidetes	M	AsmA-like C-terminal region	-	-	-	-	-	-	-	-	-	-	-	-	AsmA,AsmA_2,DUF3971
BYD3_k127_732818_2	1237149.C900_03457	2.345e-155	502.0	COG0624@1|root,COG0624@2|Bacteria,4NI66@976|Bacteroidetes,47NB9@768503|Cytophagia	976|Bacteroidetes	E	Peptidase dimerisation domain	-	-	3.4.17.11	ko:K01295	-	-	-	-	ko00000,ko01000,ko01002	-	-	-	M20_dimer,Peptidase_M20,Peptidase_M28
BYD3_k127_732818_1	1237149.C900_04595	7.692e-208	659.0	COG5009@1|root,COG5009@2|Bacteria,4NECJ@976|Bacteroidetes,47K6R@768503|Cytophagia	976|Bacteroidetes	M	Penicillin binding protein transpeptidase	pbpB	-	2.4.1.129,3.4.16.4	ko:K05366	ko00550,ko01100,ko01501,map00550,map01100,map01501	-	-	-	ko00000,ko00001,ko01000,ko01003,ko01011	-	GT51	-	Transgly,Transpeptidase
BYD3_k127_7333206_0	1185876.BN8_01964	0.0	1586.0	COG1413@1|root,COG2010@1|root,COG2133@1|root,COG1413@2|Bacteria,COG2010@2|Bacteria,COG2133@2|Bacteria,4NHMI@976|Bacteroidetes,47K6B@768503|Cytophagia	976|Bacteroidetes	CG	Membrane-bound dehydrogenase domain protein	-	-	-	-	-	-	-	-	-	-	-	-	Cytochrom_C,HEAT_2,PmoA
BYD3_k127_7333206_4	153721.MYP_3136	2.239e-48	179.0	COG0664@1|root,COG0664@2|Bacteria,4NM4K@976|Bacteroidetes,47PUR@768503|Cytophagia	976|Bacteroidetes	K	Cyclic nucleotide-monophosphate binding domain	-	-	-	-	-	-	-	-	-	-	-	-	Crp,cNMP_binding
BYD3_k127_7333206_5	1463885.KL578430_gene6947	4.659e-31	126.0	COG1670@1|root,COG1670@2|Bacteria,2HE22@201174|Actinobacteria	201174|Actinobacteria	J	SnoaL-like domain	-	-	-	-	-	-	-	-	-	-	-	-	SnoaL_2
BYD3_k127_7333206_3	643867.Ftrac_3447	2.154e-78	268.0	2EAH8@1|root,334KF@2|Bacteria,4NV1Y@976|Bacteroidetes	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_7333206_1	468059.AUHA01000002_gene867	0.0	1232.0	COG1629@1|root,COG4771@2|Bacteria,4NFJJ@976|Bacteroidetes,1IQQU@117747|Sphingobacteriia	976|Bacteroidetes	P	TonB-dependent receptor plug	-	-	-	ko:K02014	-	-	-	-	ko00000,ko02000	1.B.14	-	-	CarbopepD_reg_2,Plug,TonB_dep_Rec
BYD3_k127_7333206_2	1380600.AUYN01000003_gene15	1.99e-102	348.0	COG3503@1|root,COG3503@2|Bacteria,4NFAF@976|Bacteroidetes,1HX24@117743|Flavobacteriia	976|Bacteroidetes	S	Protein of unknown function (DUF1624)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1624
BYD3_k127_7388194_9	485918.Cpin_3744	1.537e-15	80.0	COG0745@1|root,COG0745@2|Bacteria,4NVAU@976|Bacteroidetes,1J0N5@117747|Sphingobacteriia	976|Bacteroidetes	T	cheY-homologous receiver domain	-	-	-	-	-	-	-	-	-	-	-	-	Response_reg
BYD3_k127_7388194_6	1237149.C900_05044	6.884e-62	216.0	COG1846@1|root,COG1846@2|Bacteria,4P8CE@976|Bacteroidetes	976|Bacteroidetes	K	helix_turn_helix multiple antibiotic resistance protein	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_7388194_0	1237149.C900_05043	0.0	1128.0	COG1033@1|root,COG1033@2|Bacteria,4NE0M@976|Bacteroidetes,47JQA@768503|Cytophagia	976|Bacteroidetes	S	COGs COG1033 exporter of the RND superfamily protein	-	-	-	-	-	-	-	-	-	-	-	-	MMPL
BYD3_k127_7388194_2	1237149.C900_05042	3.171e-129	418.0	COG2834@1|root,COG2834@2|Bacteria,4NERK@976|Bacteroidetes	976|Bacteroidetes	M	Outer membrane lipoprotein-sorting protein	-	-	-	-	-	-	-	-	-	-	-	-	LolA_like
BYD3_k127_7388194_1	1237149.C900_05041	2.343e-162	519.0	28I6N@1|root,2Z89J@2|Bacteria,4NKPT@976|Bacteroidetes	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_7388194_8	1288963.ADIS_3313	2.386e-27	118.0	COG2353@1|root,COG2353@2|Bacteria,4NT3W@976|Bacteroidetes,47R2B@768503|Cytophagia	976|Bacteroidetes	S	Belongs to the UPF0312 family	-	-	-	-	-	-	-	-	-	-	-	-	YceI
BYD3_k127_7388194_3	1123276.KB893245_gene1427	1.125e-123	413.0	COG1858@1|root,COG1858@2|Bacteria	2|Bacteria	C	electron transfer activity	-	-	-	-	-	-	-	-	-	-	-	-	DHOR
BYD3_k127_7388194_11	531844.FIC_00680	1.154e-07	63.0	COG2197@1|root,COG2197@2|Bacteria,4NMD4@976|Bacteroidetes,1I1W5@117743|Flavobacteriia	976|Bacteroidetes	K	LuxR family transcriptional regulator	-	-	-	-	-	-	-	-	-	-	-	-	GerE
BYD3_k127_7388194_10	755732.Fluta_3196	1.539e-14	78.0	2EDGF@1|root,337CN@2|Bacteria,4NXB6@976|Bacteroidetes	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_7388194_4	1232410.KI421412_gene30	1.023e-112	370.0	298RU@1|root,2ZVW4@2|Bacteria,1NYXC@1224|Proteobacteria	1224|Proteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_7388194_7	700598.Niako_2821	2.734e-57	203.0	COG3832@1|root,COG3832@2|Bacteria,4NRGI@976|Bacteroidetes,1ITIV@117747|Sphingobacteriia	976|Bacteroidetes	S	PFAM Activator of Hsp90 ATPase homolog 1-like protein	-	-	-	-	-	-	-	-	-	-	-	-	AHSA1
BYD3_k127_7388194_5	153721.MYP_2685	1.118e-69	239.0	COG3832@1|root,COG3832@2|Bacteria,4NNTR@976|Bacteroidetes,47X4F@768503|Cytophagia	976|Bacteroidetes	S	Pfam Activator of Hsp90 ATPase	-	-	-	-	-	-	-	-	-	-	-	-	AHSA1
BYD3_k127_7398361_2	880073.Calab_1099	9.214e-139	456.0	COG1007@1|root,COG1007@2|Bacteria,2NQBX@2323|unclassified Bacteria	2|Bacteria	C	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient	nuoN	GO:0003674,GO:0003824,GO:0003954,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006091,GO:0006119,GO:0006120,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008137,GO:0008150,GO:0008152,GO:0009060,GO:0009117,GO:0009123,GO:0009126,GO:0009141,GO:0009144,GO:0009150,GO:0009161,GO:0009167,GO:0009199,GO:0009205,GO:0009259,GO:0009987,GO:0015672,GO:0015980,GO:0015988,GO:0015990,GO:0016020,GO:0016021,GO:0016310,GO:0016491,GO:0016651,GO:0016655,GO:0017144,GO:0019637,GO:0019693,GO:0022900,GO:0022904,GO:0030964,GO:0031224,GO:0031226,GO:0032991,GO:0034220,GO:0034641,GO:0042773,GO:0042775,GO:0044237,GO:0044238,GO:0044281,GO:0044425,GO:0044459,GO:0044464,GO:0045271,GO:0045272,GO:0045333,GO:0046034,GO:0046483,GO:0050136,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0055114,GO:0070469,GO:0070470,GO:0071704,GO:0071944,GO:0072521,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0098797,GO:0098803,GO:1901135,GO:1901360,GO:1901564,GO:1902494,GO:1902600,GO:1990204	1.6.5.3	ko:K00343	ko00190,ko01100,map00190,map01100	M00144	R11945	RC00061	ko00000,ko00001,ko00002,ko01000	3.D.1	-	iEC042_1314.EC042_2517,iSbBS512_1146.SbBS512_E2652	Proton_antipo_M
BYD3_k127_7398361_1	1434325.AZQN01000003_gene2181	2.155e-196	625.0	COG1008@1|root,COG1008@2|Bacteria,4NEJ1@976|Bacteroidetes,47MKB@768503|Cytophagia	976|Bacteroidetes	C	TIGRFAM proton-translocating NADH-quinone oxidoreductase, chain M	-	-	1.6.5.3	ko:K00342	ko00190,ko01100,map00190,map01100	M00144	R11945	RC00061	ko00000,ko00001,ko00002,ko01000	3.D.1	-	-	Proton_antipo_M
BYD3_k127_7398361_0	880073.Calab_1097	3.947e-236	745.0	COG1009@1|root,COG1009@2|Bacteria,2NNU6@2323|unclassified Bacteria	2|Bacteria	CP	NADH ubiquinone oxidoreductase subunit 5 (chain L) Multisubunit Na H antiporter, MnhA subunit	nuoL	GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0015672,GO:0015988,GO:0015990,GO:0016020,GO:0016021,GO:0030964,GO:0031224,GO:0031226,GO:0032991,GO:0034220,GO:0044425,GO:0044459,GO:0044464,GO:0045271,GO:0045272,GO:0051179,GO:0051234,GO:0055085,GO:0070469,GO:0070470,GO:0071944,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0098797,GO:0098803,GO:1902494,GO:1902600,GO:1990204	1.6.5.3	ko:K00341	ko00190,ko01100,map00190,map01100	M00144	R11945	RC00061	ko00000,ko00001,ko00002,ko01000	3.D.1	-	e_coli_core.b2278,iAF1260.b2278,iBWG_1329.BWG_2052,iECDH10B_1368.ECDH10B_2440,iECDH1ME8569_1439.ECDH1ME8569_2215,iEcDH1_1363.EcDH1_1379,iJN746.PP_4129,iJO1366.b2278,iJR904.b2278,iY75_1357.Y75_RS11945	Proton_antipo_M,Proton_antipo_N
BYD3_k127_7398361_5	706587.Desti_4753	2.334e-34	136.0	COG0713@1|root,COG0713@2|Bacteria,1RH0S@1224|Proteobacteria,42VAT@68525|delta/epsilon subdivisions,2WRE5@28221|Deltaproteobacteria	28221|Deltaproteobacteria	C	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient	nuoK-2	GO:0003674,GO:0003824,GO:0003954,GO:0005575,GO:0005623,GO:0005886,GO:0008137,GO:0008150,GO:0008152,GO:0016020,GO:0016491,GO:0016651,GO:0016655,GO:0030964,GO:0032991,GO:0044425,GO:0044459,GO:0044464,GO:0045271,GO:0045272,GO:0050136,GO:0055114,GO:0070469,GO:0070470,GO:0071944,GO:0098796,GO:0098797,GO:0098803,GO:1902494,GO:1990204	1.6.5.3	ko:K00340	ko00190,ko01100,map00190,map01100	M00144	R11945	RC00061	ko00000,ko00001,ko00002,ko01000	3.D.1	-	-	Oxidored_q2
BYD3_k127_7398361_4	485918.Cpin_3817	2.136e-48	178.0	COG0839@1|root,COG0839@2|Bacteria,4NQM8@976|Bacteroidetes,1IXU9@117747|Sphingobacteriia	976|Bacteroidetes	C	PFAM NADH-ubiquinone plastoquinone oxidoreductase chain 6	-	-	1.6.5.3	ko:K00339	ko00190,ko01100,map00190,map01100	M00144	R11945	RC00061	ko00000,ko00001,ko00002,ko01000	3.D.1	-	-	Oxidored_q3
BYD3_k127_7398361_3	485918.Cpin_3818	3.115e-79	265.0	COG1143@1|root,COG1143@2|Bacteria,4NK9I@976|Bacteroidetes,1IV59@117747|Sphingobacteriia	976|Bacteroidetes	C	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient	-	-	1.6.5.3	ko:K00338	ko00190,ko01100,map00190,map01100	M00144	R11945	RC00061	ko00000,ko00001,ko00002,ko01000	3.D.1	-	-	Fer4,Fer4_4
BYD3_k127_7407054_0	1121481.AUAS01000001_gene4744	8.628e-180	570.0	COG1506@1|root,COG1506@2|Bacteria,4PKQ3@976|Bacteroidetes,47XYQ@768503|Cytophagia	976|Bacteroidetes	E	lipolytic protein G-D-S-L family	-	-	-	-	-	-	-	-	-	-	-	-	CBM9_1,Peptidase_S9
BYD3_k127_7407054_2	1237149.C900_02949	7.403e-28	113.0	COG0782@1|root,COG0782@2|Bacteria,4P5Y7@976|Bacteroidetes,47VW6@768503|Cytophagia	976|Bacteroidetes	J	Transcription elongation factor, GreA/GreB, C-term	-	-	-	-	-	-	-	-	-	-	-	-	GreA_GreB
BYD3_k127_7407054_4	1120968.AUBX01000010_gene1094	3.128e-11	64.0	COG0782@1|root,COG0782@2|Bacteria	2|Bacteria	K	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus	greB	GO:0006139,GO:0006351,GO:0006352,GO:0006355,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009889,GO:0009893,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010604,GO:0016070,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0031323,GO:0031325,GO:0031326,GO:0031437,GO:0031439,GO:0032774,GO:0032784,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0045935,GO:0046483,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0060255,GO:0065007,GO:0071704,GO:0080090,GO:0090304,GO:0097659,GO:1901360,GO:1901362,GO:1901576,GO:1903311,GO:1903313,GO:1903506,GO:2000112,GO:2001141	-	ko:K04760	-	-	-	-	ko00000,ko03021	-	-	-	GreA_GreB,GreA_GreB_N
BYD3_k127_7407054_3	587753.EY04_21635	1.318e-14	74.0	COG0782@1|root,COG0782@2|Bacteria,1RAP0@1224|Proteobacteria,1S40Q@1236|Gammaproteobacteria	1236|Gammaproteobacteria	K	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreB releases sequences of up to 9 nucleotides in length	greB	-	-	ko:K04760	-	-	-	-	ko00000,ko03021	-	-	-	GreA_GreB,GreA_GreB_N
BYD3_k127_7407054_1	1123278.KB893452_gene737	3.884e-149	509.0	COG0642@1|root,COG3292@1|root,COG0642@2|Bacteria,COG2205@2|Bacteria,COG3292@2|Bacteria,4NDXU@976|Bacteroidetes,47Y2E@768503|Cytophagia	976|Bacteroidetes	T	Two component regulator three Y domain protein	-	-	-	-	-	-	-	-	-	-	-	-	GAF,HATPase_c,HisKA,PAS_3,PAS_4,PAS_9,Reg_prop,Response_reg,Y_Y_Y
BYD3_k127_7414244_5	1121859.KB890755_gene1266	2.388e-48	177.0	COG3047@1|root,COG3047@2|Bacteria	2|Bacteria	-	-	-	-	-	ko:K07275	-	-	-	-	ko00000	-	-	-	OMP_b-brl,OmpW
BYD3_k127_7414244_2	1341181.FLJC2902T_14510	1.832e-83	284.0	COG3637@1|root,COG3637@2|Bacteria,4NPV9@976|Bacteroidetes,1I47X@117743|Flavobacteriia,2NSX3@237|Flavobacterium	976|Bacteroidetes	M	Outer membrane protein beta-barrel domain	-	-	-	-	-	-	-	-	-	-	-	-	OMP_b-brl_2
BYD3_k127_7414244_1	700598.Niako_2476	1.146e-90	312.0	COG0729@1|root,COG0729@2|Bacteria,4PMQ2@976|Bacteroidetes,1J0MU@117747|Sphingobacteriia	976|Bacteroidetes	M	Surface antigen	-	-	-	-	-	-	-	-	-	-	-	-	Bac_surface_Ag
BYD3_k127_7414244_6	1239962.C943_00137	3.688e-39	151.0	2CWBN@1|root,32SZD@2|Bacteria,4NU6S@976|Bacteroidetes	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_7414244_0	1120966.AUBU01000010_gene2778	4.53e-136	443.0	COG1262@1|root,COG1262@2|Bacteria,4NFR2@976|Bacteroidetes,47KU9@768503|Cytophagia	976|Bacteroidetes	S	Sulfatase-modifying factor enzyme 1	-	-	1.8.3.7	ko:K13444	ko04142,map04142	-	-	-	ko00000,ko00001,ko01000	-	-	-	FGE-sulfatase
BYD3_k127_7439771_2	1121904.ARBP01000002_gene7112	6.042e-131	427.0	COG1629@1|root,COG4771@2|Bacteria,4P1Z5@976|Bacteroidetes,47JHW@768503|Cytophagia	976|Bacteroidetes	P	PFAM TonB-dependent Receptor Plug	-	-	-	-	-	-	-	-	-	-	-	-	CarbopepD_reg_2,Plug,TonB_dep_Rec
BYD3_k127_7439771_1	1121904.ARBP01000002_gene7111	1.531e-187	604.0	COG0436@1|root,COG0436@2|Bacteria,4NEN3@976|Bacteroidetes,47MR5@768503|Cytophagia	976|Bacteroidetes	E	RagB SusD	-	-	-	ko:K21572	-	-	-	-	ko00000,ko02000	8.A.46.1,8.A.46.3	-	-	SusD-like_3,SusD_RagB
BYD3_k127_7439771_0	1250232.JQNJ01000001_gene1442	8.075e-219	688.0	COG2931@1|root,COG2931@2|Bacteria,4PKJU@976|Bacteroidetes,1IJB7@117743|Flavobacteriia	976|Bacteroidetes	Q	PAP2 superfamily	-	-	-	-	-	-	-	-	-	-	-	-	PAP2
BYD3_k127_7440526_3	1121481.AUAS01000001_gene4744	7.557e-119	386.0	COG1506@1|root,COG1506@2|Bacteria,4PKQ3@976|Bacteroidetes,47XYQ@768503|Cytophagia	976|Bacteroidetes	E	lipolytic protein G-D-S-L family	-	-	-	-	-	-	-	-	-	-	-	-	CBM9_1,Peptidase_S9
BYD3_k127_7440526_4	1237149.C900_02689	2.27e-24	104.0	COG1278@1|root,COG1278@2|Bacteria,4NURE@976|Bacteroidetes,47RX4@768503|Cytophagia	976|Bacteroidetes	K	Cold-shock protein	-	-	-	ko:K03704	-	-	-	-	ko00000,ko03000	-	-	-	CSD
BYD3_k127_7440526_5	880073.Calab_2885	1.844e-18	89.0	COG0724@1|root,COG0724@2|Bacteria,2NPT0@2323|unclassified Bacteria	2|Bacteria	S	RNA recognition motif	rpbA	-	-	-	-	-	-	-	-	-	-	-	RRM_1
BYD3_k127_7440526_1	714943.Mucpa_4082	3.889e-140	454.0	COG0332@1|root,COG0332@2|Bacteria,4NEZE@976|Bacteroidetes,1IPKV@117747|Sphingobacteriia	976|Bacteroidetes	I	PFAM 3-Oxoacyl- acyl-carrier-protein (ACP) synthase III	fabH	-	2.3.1.180	ko:K00648	ko00061,ko01100,ko01212,map00061,map01100,map01212	M00082,M00083	R10707	RC00004,RC02729,RC02888	ko00000,ko00001,ko00002,ko01000,ko01004	-	-	-	ACP_syn_III,ACP_syn_III_C
BYD3_k127_7440526_2	1279009.ADICEAN_00381	2.706e-126	409.0	COG0568@1|root,COG0568@2|Bacteria,4NEBF@976|Bacteroidetes,47JZ7@768503|Cytophagia	976|Bacteroidetes	K	Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released	rpoD	-	-	ko:K03086	-	-	-	-	ko00000,ko03021	-	-	-	Sigma70_r1_2,Sigma70_r2,Sigma70_r3,Sigma70_r4
BYD3_k127_7440526_0	760192.Halhy_0549	9.885e-228	711.0	28JP4@1|root,2Z9F6@2|Bacteria,4NDYM@976|Bacteroidetes,1IVSV@117747|Sphingobacteriia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_7444969_2	1237149.C900_03331	2.776e-55	199.0	COG0484@1|root,COG0484@2|Bacteria	2|Bacteria	O	heat shock protein binding	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_7444969_0	1237149.C900_03332	3.463e-177	560.0	COG2159@1|root,COG2159@2|Bacteria,4NIGJ@976|Bacteroidetes,47KJH@768503|Cytophagia	976|Bacteroidetes	S	Amidohydrolase	-	-	4.1.1.45	ko:K03392	ko00380,ko01100,map00380,map01100	M00038	R04323	RC00779	ko00000,ko00001,ko00002,ko01000	-	-	-	Amidohydro_2
BYD3_k127_7444969_1	1237149.C900_00608	1.258e-100	336.0	COG1629@1|root,COG4771@2|Bacteria,4NF4B@976|Bacteroidetes,47JN3@768503|Cytophagia	976|Bacteroidetes	P	TonB-dependent Receptor Plug	-	-	-	-	-	-	-	-	-	-	-	-	CarbopepD_reg_2,Plug,TonB_dep_Rec
BYD3_k127_7472550_2	760192.Halhy_3307	2.045e-178	576.0	COG3590@1|root,COG3590@2|Bacteria,4NKGB@976|Bacteroidetes,1IUS0@117747|Sphingobacteriia	976|Bacteroidetes	O	peptidase	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_7472550_4	760192.Halhy_3308	2.505e-52	203.0	COG2333@1|root,COG2333@2|Bacteria,4NN5Y@976|Bacteroidetes,1IV9P@117747|Sphingobacteriia	976|Bacteroidetes	S	competence protein COMEC	-	-	-	-	-	-	-	-	-	-	-	-	Lactamase_B
BYD3_k127_7472550_3	1358423.N180_14120	2.052e-72	252.0	COG4544@1|root,COG4544@2|Bacteria,4NN6K@976|Bacteroidetes,1IS0M@117747|Sphingobacteriia	976|Bacteroidetes	S	Component of the SOS system and an inhibitor of cell division. Accumulation of SulA causes rapid cessation of cell division and the appearance of long, non-septate filaments. In the presence of GTP, binds a polymerization-competent form of FtsZ in a 1 1 ratio, thus inhibiting FtsZ polymerization and therefore preventing it from participating in the assembly of the Z ring. This mechanism prevents the premature segregation of damaged DNA to daughter cells during cell division	-	-	-	ko:K14160	-	-	-	-	ko00000,ko03400	-	-	-	-
BYD3_k127_7472550_1	1123248.KB893359_gene2194	9.069e-210	664.0	COG0389@1|root,COG0389@2|Bacteria,4NII1@976|Bacteroidetes,1IQUQ@117747|Sphingobacteriia	976|Bacteroidetes	L	Nucleotidyltransferase DNA polymerase involved in DNA repair	-	-	-	ko:K14161	-	-	-	-	ko00000,ko03400	-	-	-	IMS
BYD3_k127_7472550_0	1123248.KB893359_gene2193	0.0	1283.0	COG0587@1|root,COG0587@2|Bacteria,4NGTT@976|Bacteroidetes,1IQQT@117747|Sphingobacteriia	976|Bacteroidetes	L	Belongs to the DNA polymerase type-C family. DnaE2 subfamily	-	-	2.7.7.7	ko:K14162	-	-	-	-	ko00000,ko01000,ko03400	-	-	-	DNA_pol3_alpha,HHH_6,PHP,tRNA_anti-codon
BYD3_k127_7474145_0	471854.Dfer_2410	3.468e-113	377.0	COG1228@1|root,COG1228@2|Bacteria,4NK17@976|Bacteroidetes,47XA9@768503|Cytophagia	976|Bacteroidetes	Q	Amidohydrolase family	-	-	-	-	-	-	-	-	-	-	-	-	Amidohydro_1
BYD3_k127_7474145_3	1007103.AFHW01000004_gene4499	3.511e-38	147.0	COG2259@1|root,31BQE@2|Bacteria,1VXQN@1239|Firmicutes,4HXCN@91061|Bacilli,26YSK@186822|Paenibacillaceae	91061|Bacilli	S	DoxX-like family	-	-	-	-	-	-	-	-	-	-	-	-	DoxX_2
BYD3_k127_7474145_2	1121898.Q766_08120	5.008e-39	150.0	COG3832@1|root,COG3832@2|Bacteria,4NPAB@976|Bacteroidetes,1I2GF@117743|Flavobacteriia,2NVZA@237|Flavobacterium	976|Bacteroidetes	J	glyoxalase III activity	-	-	-	-	-	-	-	-	-	-	-	-	AHSA1
BYD3_k127_7474145_1	307480.IW16_11590	3.583e-92	311.0	COG0596@1|root,COG0596@2|Bacteria,4NJJD@976|Bacteroidetes,1I5F1@117743|Flavobacteriia,3ZP4I@59732|Chryseobacterium	976|Bacteroidetes	S	Alpha/beta hydrolase family	-	-	-	-	-	-	-	-	-	-	-	-	Abhydrolase_1
BYD3_k127_7474145_4	313606.M23134_00275	2.62e-22	104.0	COG2207@1|root,COG2207@2|Bacteria	2|Bacteria	K	Transcriptional regulator	-	-	-	-	-	-	-	-	-	-	-	-	HTH_18
BYD3_k127_748664_7	558152.IQ37_00185	3.312e-06	54.0	2BY07@1|root,34125@2|Bacteria,4P3YD@976|Bacteroidetes,1I9QI@117743|Flavobacteriia,3ZS7J@59732|Chryseobacterium	976|Bacteroidetes	S	Transposase	-	-	-	-	-	-	-	-	-	-	-	-	HTH_7
BYD3_k127_748664_6	1392490.JHZX01000001_gene1039	2.204e-14	75.0	COG2827@1|root,COG2827@2|Bacteria	2|Bacteria	L	Endonuclease containing a URI domain	-	-	3.1.21.3	ko:K01154,ko:K07461	-	-	-	-	ko00000,ko01000,ko02048	-	-	-	GIY-YIG
BYD3_k127_748664_5	1223410.KN050846_gene101	9.66e-32	125.0	2E3T5@1|root,32YQK@2|Bacteria,4NWIR@976|Bacteroidetes	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_748664_2	468059.AUHA01000007_gene2705	1.168e-124	408.0	COG4447@1|root,COG4447@2|Bacteria,4NHFZ@976|Bacteroidetes,1IRR7@117747|Sphingobacteriia	976|Bacteroidetes	S	cellulose binding	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_748664_4	1047013.AQSP01000115_gene339	1.864e-46	172.0	295NE@1|root,2ZSZT@2|Bacteria	2|Bacteria	S	DoxX	-	-	1.8.5.2	ko:K16937	ko00920,ko01120,map00920,map01120	-	R07177	-	ko00000,ko00001,ko01000	3.D.4.9	-	-	DoxX
BYD3_k127_748664_1	1121904.ARBP01000006_gene4027	6.552e-246	769.0	COG0673@1|root,COG0673@2|Bacteria,4NF4Q@976|Bacteroidetes,47M9C@768503|Cytophagia	976|Bacteroidetes	S	Oxidoreductase domain protein	-	-	-	-	-	-	-	-	-	-	-	-	GFO_IDH_MocA,GFO_IDH_MocA_C
BYD3_k127_748664_3	991.IW20_13940	8.989e-71	244.0	COG1045@1|root,COG1045@2|Bacteria,4NUIU@976|Bacteroidetes,1I56E@117743|Flavobacteriia	976|Bacteroidetes	E	Bacterial transferase hexapeptide (six repeats)	-	-	-	-	-	-	-	-	-	-	-	-	Hexapep
BYD3_k127_748664_0	1304284.L21TH_1164	1.945e-266	829.0	COG0058@1|root,COG0058@2|Bacteria,1TQAJ@1239|Firmicutes,248E1@186801|Clostridia,36E5W@31979|Clostridiaceae	186801|Clostridia	G	Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties	glgP2	-	2.4.1.1	ko:K00688	ko00500,ko01100,ko01110,ko02026,ko04217,ko04910,ko04922,ko04931,map00500,map01100,map01110,map02026,map04217,map04910,map04922,map04931	-	R02111	-	ko00000,ko00001,ko01000	-	GT35	-	DUF3417,Glyco_transf_5,Phosphorylase
BYD3_k127_749431_0	1237149.C900_03765	4.506e-142	460.0	COG1748@1|root,COG1748@2|Bacteria,4NFM8@976|Bacteroidetes,47MT4@768503|Cytophagia	976|Bacteroidetes	E	Saccharopine dehydrogenase	-	-	1.5.1.10,1.5.1.7	ko:K00290,ko:K00293	ko00300,ko00310,ko01100,ko01110,ko01130,ko01230,map00300,map00310,map01100,map01110,map01130,map01230	M00030,M00032	R00715,R02315	RC00215,RC00217,RC00225,RC01532	ko00000,ko00001,ko00002,ko01000	-	-	-	Sacchrp_dh_C,Sacchrp_dh_NADP
BYD3_k127_749431_5	1121904.ARBP01000010_gene2401	9.573e-47	182.0	COG0204@1|root,COG0204@2|Bacteria,4NN7X@976|Bacteroidetes,47RSW@768503|Cytophagia	976|Bacteroidetes	I	Phosphate acyltransferases	-	-	-	-	-	-	-	-	-	-	-	-	Acyltransferase
BYD3_k127_749431_1	643867.Ftrac_1715	6.726e-79	273.0	COG0385@1|root,COG0385@2|Bacteria,4NEIM@976|Bacteroidetes,47PJM@768503|Cytophagia	976|Bacteroidetes	S	SBF-like CPA transporter family (DUF4137)	-	-	-	ko:K03453	-	-	-	-	ko00000	2.A.28	-	-	SBF
BYD3_k127_749431_3	1305737.JAFX01000001_gene3347	1.013e-70	241.0	COG0328@1|root,COG0328@2|Bacteria,4NNQX@976|Bacteroidetes,47PXE@768503|Cytophagia	976|Bacteroidetes	L	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids	rnhA	-	3.1.26.4	ko:K03469	ko03030,map03030	-	-	-	ko00000,ko00001,ko01000,ko03032	-	-	-	RNase_H
BYD3_k127_749431_4	1124780.ANNU01000049_gene2195	1.242e-68	239.0	COG2095@1|root,COG2095@2|Bacteria,4NG94@976|Bacteroidetes,47PA2@768503|Cytophagia	976|Bacteroidetes	U	PFAM MarC family integral membrane protein	marC	-	-	ko:K05595	-	-	-	-	ko00000,ko02000	2.A.95.1	-	-	MarC
BYD3_k127_749431_2	1434325.AZQN01000008_gene3030	1.001e-73	252.0	2BVKK@1|root,2Z8PC@2|Bacteria,4NF9X@976|Bacteroidetes,47KVJ@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	Porin_O_P
BYD3_k127_7496228_6	1434325.AZQN01000009_gene3994	1.027e-20	94.0	COG2962@1|root,COG2962@2|Bacteria,4NPB9@976|Bacteroidetes,47P6W@768503|Cytophagia	976|Bacteroidetes	S	EamA-like transporter family	yojE	-	-	ko:K05786	-	-	-	-	ko00000,ko02000	2.A.7.7	-	-	EamA
BYD3_k127_7496228_0	1408433.JHXV01000005_gene2538	1.308e-121	398.0	COG2070@1|root,COG2070@2|Bacteria,4NFIW@976|Bacteroidetes,1HY76@117743|Flavobacteriia,2PBER@246874|Cryomorphaceae	976|Bacteroidetes	S	Thiazole biosynthesis protein ThiG	-	-	1.13.12.16	ko:K00459	ko00910,map00910	-	R00025	RC02541,RC02759	ko00000,ko00001,ko01000	-	-	-	NMO
BYD3_k127_7496228_4	929556.Solca_4221	8.631e-46	170.0	2APQJ@1|root,31EUD@2|Bacteria,4NNU5@976|Bacteroidetes,1ITJ4@117747|Sphingobacteriia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_7496228_5	794903.OPIT5_11735	2.372e-42	164.0	COG0500@1|root,COG0500@2|Bacteria,46V7N@74201|Verrucomicrobia,3K8BC@414999|Opitutae	414999|Opitutae	Q	methyltransferase	-	-	-	-	-	-	-	-	-	-	-	-	Methyltransf_25
BYD3_k127_7496228_1	504472.Slin_5745	6.335e-68	236.0	COG0705@1|root,COG0705@2|Bacteria,4NECA@976|Bacteroidetes,47N8U@768503|Cytophagia	976|Bacteroidetes	S	PFAM Rhomboid family	-	-	-	-	-	-	-	-	-	-	-	-	Rhomboid
BYD3_k127_7496228_3	153721.MYP_2837	4.053e-54	193.0	COG3832@1|root,COG3832@2|Bacteria,4PKNU@976|Bacteroidetes,47QK4@768503|Cytophagia	976|Bacteroidetes	S	Activator of Hsp90 ATPase homolog 1-like protein	-	-	-	-	-	-	-	-	-	-	-	-	AHSA1
BYD3_k127_7496228_2	1144313.PMI10_00742	4.448e-60	233.0	COG2374@1|root,COG2374@2|Bacteria,4PKDU@976|Bacteroidetes,1IJ8H@117743|Flavobacteriia,2NV5C@237|Flavobacterium	976|Bacteroidetes	S	amine dehydrogenase activity	-	-	-	-	-	-	-	-	-	-	-	-	Exo_endo_phos,LTD
BYD3_k127_7496228_7	266748.HY04_12645	2.198e-15	79.0	2E4AP@1|root,32Z6C@2|Bacteria,4NWDP@976|Bacteroidetes,1I55P@117743|Flavobacteriia,3ZRMH@59732|Chryseobacterium	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_75178_1	1123278.KB893455_gene769	2.364e-70	248.0	COG4977@1|root,COG4977@2|Bacteria,4PKXD@976|Bacteroidetes,47Y72@768503|Cytophagia	976|Bacteroidetes	K	AraC-like ligand binding domain	-	-	-	-	-	-	-	-	-	-	-	-	AraC_binding,HTH_AraC
BYD3_k127_75178_2	1346330.M472_04270	1.285e-60	221.0	COG0329@1|root,COG0329@2|Bacteria,4NHBA@976|Bacteroidetes,1IR29@117747|Sphingobacteriia	976|Bacteroidetes	EM	Belongs to the DapA family	-	-	4.1.3.3,4.2.1.41,4.3.3.7	ko:K01639,ko:K01707,ko:K01714	ko00053,ko00261,ko00300,ko00520,ko01100,ko01110,ko01120,ko01130,ko01230,map00053,map00261,map00300,map00520,map01100,map01110,map01120,map01130,map01230	M00016,M00525,M00526,M00527	R01811,R02279,R10147	RC00159,RC00600,RC00678,RC03062,RC03063	ko00000,ko00001,ko00002,ko01000	-	-	-	DHDPS
BYD3_k127_75178_0	1123248.KB893385_gene4914	1.457e-123	399.0	COG1609@1|root,COG4977@1|root,COG1609@2|Bacteria,COG4977@2|Bacteria,4NGPU@976|Bacteroidetes,1IW5B@117747|Sphingobacteriia	976|Bacteroidetes	K	Periplasmic binding proteins and sugar binding domain of LacI family	-	-	-	ko:K02529	-	-	-	-	ko00000,ko03000	-	-	-	HTH_18,Peripla_BP_3
BYD3_k127_7519370_1	1048983.EL17_22580	1.792e-104	348.0	COG3420@1|root,COG3420@2|Bacteria,4NEGT@976|Bacteroidetes,47KEF@768503|Cytophagia	976|Bacteroidetes	P	Periplasmic copper-binding protein (NosD)	nosD	-	-	ko:K07218	-	-	-	-	ko00000	-	-	-	NosD
BYD3_k127_7519370_2	761193.Runsl_0112	1.28e-103	346.0	COG4314@1|root,COG4314@2|Bacteria,4NIPU@976|Bacteroidetes,47NSZ@768503|Cytophagia	976|Bacteroidetes	C	lipoprotein involved in nitrous oxide reduction	-	-	-	ko:K19342	-	-	-	-	ko00000	-	-	-	NosL
BYD3_k127_7519370_0	1089547.KB913013_gene4642	0.0	1064.0	COG4263@1|root,COG4263@2|Bacteria,4NFNE@976|Bacteroidetes,47KTB@768503|Cytophagia	976|Bacteroidetes	C	Nitrous oxide reductase	nosZ	-	1.7.2.4	ko:K00376	ko00910,ko01120,map00910,map01120	M00529	R02804	RC02861	ko00000,ko00001,ko00002,ko01000	-	-	-	-
BYD3_k127_7519370_8	1122176.KB903565_gene3242	1.29e-51	187.0	COG2010@1|root,COG2010@2|Bacteria,4NMD5@976|Bacteroidetes,1IY7U@117747|Sphingobacteriia	976|Bacteroidetes	C	Cytochrome c	-	-	-	-	-	-	-	-	-	-	-	-	Cytochrom_C
BYD3_k127_7519370_6	1121904.ARBP01000012_gene1220	1.715e-62	230.0	COG2010@1|root,COG2010@2|Bacteria,4NHY4@976|Bacteroidetes,47Q2U@768503|Cytophagia	976|Bacteroidetes	C	Cytochrome c	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_7519370_3	1237149.C900_02003	8.324e-79	276.0	COG4243@1|root,COG4243@2|Bacteria,4NJIE@976|Bacteroidetes,47NM4@768503|Cytophagia	976|Bacteroidetes	S	Vitamin k epoxide reductase	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_7519370_4	1173028.ANKO01000094_gene2611	2.887e-72	258.0	COG1680@1|root,COG1680@2|Bacteria,1G6GD@1117|Cyanobacteria,1HBFP@1150|Oscillatoriales	1117|Cyanobacteria	V	Beta-lactamase	-	-	3.4.16.4	ko:K01286	-	-	-	-	ko00000,ko01000	-	-	-	Beta-lactamase
BYD3_k127_7519370_5	1237149.C900_02958	5.439e-64	224.0	COG0664@1|root,COG0664@2|Bacteria,4NJ1H@976|Bacteroidetes,47PVN@768503|Cytophagia	976|Bacteroidetes	T	Cyclic nucleotide-binding domain	-	-	-	-	-	-	-	-	-	-	-	-	cNMP_binding
BYD3_k127_7519370_7	700598.Niako_3155	1.01e-59	211.0	COG4319@1|root,COG4319@2|Bacteria,4NS0P@976|Bacteroidetes,1IYSY@117747|Sphingobacteriia	976|Bacteroidetes	S	ketosteroid isomerase	-	-	-	-	-	-	-	-	-	-	-	-	DUF4440
BYD3_k127_7519370_9	307480.IW16_11365	1.883e-39	152.0	COG2513@1|root,COG2513@2|Bacteria,4NMEH@976|Bacteroidetes,1I2BJ@117743|Flavobacteriia,3ZPSK@59732|Chryseobacterium	976|Bacteroidetes	G	Carboxyvinyl-carboxyphosphonate phosphorylmutase	-	-	-	-	-	-	-	-	-	-	-	-	PEP_mutase
BYD3_k127_7529162_1	153721.MYP_3529	3.81e-103	345.0	2DBXV@1|root,2ZBR7@2|Bacteria,4NNEK@976|Bacteroidetes,47U2F@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_7529162_12	743722.Sph21_1505	7.722e-33	135.0	29AZZ@1|root,2ZXYX@2|Bacteria,4NP6M@976|Bacteroidetes,1ITA8@117747|Sphingobacteriia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_7529162_8	1237149.C900_00245	8.238e-43	163.0	COG0526@1|root,COG0526@2|Bacteria,4NSUU@976|Bacteroidetes,47R9W@768503|Cytophagia	976|Bacteroidetes	CO	AhpC/TSA family	-	-	-	-	-	-	-	-	-	-	-	-	AhpC-TSA,Redoxin
BYD3_k127_7529162_9	1237149.C900_00244	2.792e-40	158.0	COG2091@1|root,COG2091@2|Bacteria,4NSBI@976|Bacteroidetes,47RPQ@768503|Cytophagia	976|Bacteroidetes	H	Belongs to the P-Pant transferase superfamily	sfp	-	-	-	-	-	-	-	-	-	-	-	ACPS
BYD3_k127_7529162_0	1237149.C900_00243	4.159e-120	392.0	COG2319@1|root,COG2319@2|Bacteria,4NH20@976|Bacteroidetes,47JUN@768503|Cytophagia	976|Bacteroidetes	S	PFAM WD domain, G-beta repeat	-	-	-	-	-	-	-	-	-	-	-	-	WD40
BYD3_k127_7529162_6	1237149.C900_00242	1.863e-63	225.0	COG3599@1|root,COG3599@2|Bacteria,4NQDF@976|Bacteroidetes,47QRC@768503|Cytophagia	976|Bacteroidetes	D	TIGRFAM DivIVA domain	divIVA	-	-	ko:K04074	-	-	-	-	ko00000,ko03036	-	-	-	DivIVA
BYD3_k127_7529162_10	1237149.C900_00241	3.241e-35	137.0	COG1539@1|root,COG1539@2|Bacteria,4NQ53@976|Bacteroidetes,47QM5@768503|Cytophagia	976|Bacteroidetes	H	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin	folB	-	1.13.11.81,4.1.2.25,5.1.99.8	ko:K01633	ko00790,ko01100,map00790,map01100	M00126,M00840	R03504,R11037,R11073	RC00721,RC00943,RC01479,RC03333,RC03334	ko00000,ko00001,ko00002,ko01000	-	-	-	FolB
BYD3_k127_7529162_11	1124780.ANNU01000030_gene1165	4.233e-35	136.0	COG0316@1|root,COG0316@2|Bacteria,4NS6K@976|Bacteroidetes,47R1C@768503|Cytophagia	976|Bacteroidetes	S	Belongs to the HesB IscA family	iscA	-	-	ko:K13628	-	-	-	-	ko00000,ko03016	-	-	-	Fe-S_biosyn
BYD3_k127_7529162_7	1237149.C900_05758	2.377e-57	204.0	28NWP@1|root,2ZBUH@2|Bacteria,4NNPT@976|Bacteroidetes,47M02@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_7529162_13	1237149.C900_05757	3.426e-28	118.0	COG3339@1|root,COG3339@2|Bacteria,4NVFR@976|Bacteroidetes,47RD8@768503|Cytophagia	976|Bacteroidetes	S	Protein of unknown function (DUF1232)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1232
BYD3_k127_7529162_4	1237149.C900_05756	2.229e-67	236.0	COG0702@1|root,COG0702@2|Bacteria,4NG89@976|Bacteroidetes,47PTQ@768503|Cytophagia	976|Bacteroidetes	GM	epimerase	-	-	-	-	-	-	-	-	-	-	-	-	Epimerase,NAD_binding_10
BYD3_k127_7529162_5	1453498.LG45_01240	6.904e-65	224.0	COG1490@1|root,COG1490@2|Bacteria,4NNFF@976|Bacteroidetes,1I1XN@117743|Flavobacteriia,2NW14@237|Flavobacterium	976|Bacteroidetes	J	rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality	dtd	GO:0002161,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006399,GO:0006450,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016070,GO:0016787,GO:0016788,GO:0034641,GO:0034660,GO:0043170,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0051499,GO:0051500,GO:0052689,GO:0065007,GO:0065008,GO:0071704,GO:0090304,GO:0106074,GO:0140098,GO:0140101,GO:1901360	-	ko:K07560	-	-	-	-	ko00000,ko01000,ko03016	-	-	-	Tyr_Deacylase
BYD3_k127_7529162_3	1121324.CLIT_2c02600	5.169e-68	235.0	COG2110@1|root,COG2110@2|Bacteria,1TPCU@1239|Firmicutes,24ARG@186801|Clostridia	186801|Clostridia	T	domain protein	ymdB	-	-	-	-	-	-	-	-	-	-	-	Macro
BYD3_k127_7529162_2	485917.Phep_4285	2.137e-70	244.0	COG2173@1|root,COG2173@2|Bacteria,4NE2K@976|Bacteroidetes,1IS0X@117747|Sphingobacteriia	976|Bacteroidetes	M	Catalyzes hydrolysis of the D-alanyl-D-alanine dipeptide	vanX	-	3.4.13.22	ko:K08641	ko01502,ko02020,map01502,map02020	M00651	-	-	ko00000,ko00001,ko00002,ko01000,ko01002,ko01011,ko01504	-	-	-	Peptidase_M15
BYD3_k127_7530802_13	313606.M23134_03203	1.011e-56	201.0	COG1807@1|root,COG1807@2|Bacteria,4PKJX@976|Bacteroidetes,47KCA@768503|Cytophagia	976|Bacteroidetes	M	Protein of unknown function (DUF2723)	-	-	-	-	-	-	-	-	-	-	-	-	DUF2723
BYD3_k127_7530802_3	1356852.N008_03980	3.601e-124	409.0	COG0399@1|root,COG0399@2|Bacteria,4NEBI@976|Bacteroidetes,47J92@768503|Cytophagia	976|Bacteroidetes	E	Belongs to the DegT DnrJ EryC1 family	eryC	-	-	-	-	-	-	-	-	-	-	-	DegT_DnrJ_EryC1
BYD3_k127_7530802_8	1237149.C900_02862	1.078e-66	233.0	2C6AJ@1|root,304IU@2|Bacteria,4NPQW@976|Bacteroidetes,47Q1B@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_7530802_0	1237149.C900_02863	1.702e-156	504.0	COG0457@1|root,COG0457@2|Bacteria,4PM6F@976|Bacteroidetes,47Y4H@768503|Cytophagia	976|Bacteroidetes	S	Tetratricopeptide repeat	-	-	-	-	-	-	-	-	-	-	-	-	TPR_8
BYD3_k127_7530802_1	1237149.C900_02864	5.46e-135	443.0	28ICP@1|root,2Z8EZ@2|Bacteria,4NKKI@976|Bacteroidetes,47N2N@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_7530802_14	1288963.ADIS_0184	1.421e-50	193.0	COG0438@1|root,COG0438@2|Bacteria,4NJ6W@976|Bacteroidetes,47N47@768503|Cytophagia	976|Bacteroidetes	M	Glycosyl transferases group 1	-	-	-	-	-	-	-	-	-	-	-	-	Glyco_trans_1_4,Glycos_transf_1
BYD3_k127_7530802_6	153721.MYP_1007	2.68e-81	279.0	COG1682@1|root,COG1682@2|Bacteria,4NF36@976|Bacteroidetes,47NFE@768503|Cytophagia	976|Bacteroidetes	GM	PFAM ABC-2 type transporter	-	-	-	ko:K09690	ko02010,map02010	M00250	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.103	-	-	ABC2_membrane
BYD3_k127_7530802_2	643867.Ftrac_2214	3.12e-131	429.0	COG1134@1|root,COG1134@2|Bacteria,4NEDM@976|Bacteroidetes,47JN7@768503|Cytophagia	976|Bacteroidetes	GM	ABC-type polysaccharide polyol phosphate transport system ATPase component	-	-	-	ko:K09691	ko02010,map02010	M00250	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.103	-	-	ABC_tran,Wzt_C
BYD3_k127_7530802_9	313606.M23134_04362	9.718e-66	231.0	COG4122@1|root,COG4122@2|Bacteria,4NP2A@976|Bacteroidetes,47SZD@768503|Cytophagia	976|Bacteroidetes	S	Macrocin-O-methyltransferase (TylF)	-	-	-	-	-	-	-	-	-	-	-	-	TylF
BYD3_k127_7530802_10	762903.Pedsa_2316	5.637e-65	229.0	COG2227@1|root,COG2227@2|Bacteria,4PP3F@976|Bacteroidetes	976|Bacteroidetes	H	Methyltransferase domain	-	-	-	-	-	-	-	-	-	-	-	-	Methyltransf_23
BYD3_k127_7530802_11	762903.Pedsa_2317	2.7e-60	220.0	COG1215@1|root,COG1215@2|Bacteria,4PNCD@976|Bacteroidetes,1J0Y2@117747|Sphingobacteriia	976|Bacteroidetes	M	Glycosyltransferase like family 2	-	-	-	-	-	-	-	-	-	-	-	-	Glycos_transf_2
BYD3_k127_7530802_5	1469607.KK073768_gene3005	2.083e-82	281.0	COG2242@1|root,COG2242@2|Bacteria,1GA4I@1117|Cyanobacteria	1117|Cyanobacteria	HO	Methyltransferase FkbM domain	-	-	-	-	-	-	-	-	-	-	-	-	Methyltransf_21
BYD3_k127_7530802_16	714943.Mucpa_3482	4.951e-29	129.0	COG4421@1|root,COG4421@2|Bacteria,4NVD4@976|Bacteroidetes,1ITVP@117747|Sphingobacteriia	976|Bacteroidetes	G	Protein of unknown function (DUF563)	-	-	-	-	-	-	-	-	-	-	-	-	DUF563
BYD3_k127_7530802_15	203275.BFO_1749	3.543e-48	185.0	2E2T6@1|root,32XVF@2|Bacteria,4P40U@976|Bacteroidetes,2FY6Y@200643|Bacteroidia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_7530802_4	1128427.KB904821_gene2717	2.424e-108	361.0	28KU8@1|root,2ZCM9@2|Bacteria,1G5AX@1117|Cyanobacteria,1HAQ7@1150|Oscillatoriales	1117|Cyanobacteria	S	STELLO glycosyltransferases	-	-	-	-	-	-	-	-	-	-	-	-	STELLO
BYD3_k127_7530802_12	886379.AEWI01000019_gene1226	4.692e-60	220.0	28IIB@1|root,2Z8JE@2|Bacteria,4NT5A@976|Bacteroidetes,2FTQN@200643|Bacteroidia,3XKWB@558415|Marinilabiliaceae	976|Bacteroidetes	S	Glycosyltransferase family 10 (fucosyltransferase) C-term	-	-	-	-	-	-	-	-	-	-	-	-	Glyco_transf_10
BYD3_k127_7530802_7	1150600.ADIARSV_2163	4.556e-75	263.0	2DBCR@1|root,2Z8FA@2|Bacteria,4NH3U@976|Bacteroidetes,1IXF9@117747|Sphingobacteriia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_7530802_17	485917.Phep_3927	2.566e-09	59.0	COG0463@1|root,COG0463@2|Bacteria,4P0WQ@976|Bacteroidetes,1J0KD@117747|Sphingobacteriia	976|Bacteroidetes	M	Glycosyltransferase like family 2	-	-	2.4.1.293	ko:K17250	-	-	-	-	ko00000,ko01000,ko01003	-	GT2	-	Glycos_transf_2
BYD3_k127_7538777_0	143224.JQMD01000002_gene2503	2.893e-224	715.0	COG4888@1|root,COG4888@2|Bacteria,4NEE8@976|Bacteroidetes,1HX4C@117743|Flavobacteriia	976|Bacteroidetes	S	PFAM ASPIC and UnbV	-	-	-	-	-	-	-	-	-	-	-	-	UnbV_ASPIC,VCBS
BYD3_k127_7538777_1	1237149.C900_04045	4.034e-70	248.0	COG3595@1|root,COG3595@2|Bacteria,4NMHT@976|Bacteroidetes,47PEC@768503|Cytophagia	976|Bacteroidetes	S	Putative adhesin	-	-	-	-	-	-	-	-	-	-	-	-	DUF4097
BYD3_k127_7538777_2	1237149.C900_03140	3.926e-50	190.0	2ETG7@1|root,33M02@2|Bacteria,4NXSR@976|Bacteroidetes	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_754624_4	1123248.KB893326_gene1340	5.25e-55	200.0	2D42T@1|root,32TG5@2|Bacteria,4NT28@976|Bacteroidetes,1IT84@117747|Sphingobacteriia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_754624_2	743722.Sph21_0865	1.123e-69	240.0	COG0262@1|root,COG0262@2|Bacteria,4NR4N@976|Bacteroidetes,1IYRH@117747|Sphingobacteriia	976|Bacteroidetes	H	RibD C-terminal domain	-	-	-	-	-	-	-	-	-	-	-	-	RibD_C
BYD3_k127_754624_7	1122605.KB893638_gene3459	5.836e-18	88.0	2CAP7@1|root,33DEX@2|Bacteria,4NZ17@976|Bacteroidetes,1IZE5@117747|Sphingobacteriia	976|Bacteroidetes	S	Domain of unknown function (DUF1772)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1772
BYD3_k127_754624_3	1144313.PMI10_03065	2.257e-56	201.0	2CHCP@1|root,32S5R@2|Bacteria,4NS9G@976|Bacteroidetes,1I4BI@117743|Flavobacteriia,2NWBW@237|Flavobacterium	976|Bacteroidetes	S	Domain of unknown function (DU1801)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1801
BYD3_k127_754624_1	1250232.JQNJ01000001_gene1674	2.309e-79	267.0	COG2514@1|root,COG2514@2|Bacteria,4NMJC@976|Bacteroidetes,1I2B2@117743|Flavobacteriia	976|Bacteroidetes	S	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily	catE	-	1.13.11.2	ko:K07104	ko00361,ko00362,ko00622,ko00643,ko01100,ko01120,ko01220,map00361,map00362,map00622,map00643,map01100,map01120,map01220	M00569	R00816,R04089,R05295,R05404,R05406,R07795	RC00387,RC00643,RC01075,RC01364,RC01914	ko00000,ko00001,ko00002,ko01000	-	-	-	Glyoxalase
BYD3_k127_754624_8	269798.CHU_1082	6.231e-14	74.0	COG1765@1|root,COG1765@2|Bacteria,4NFWN@976|Bacteroidetes,47QVZ@768503|Cytophagia	976|Bacteroidetes	O	OsmC-like protein	-	-	-	ko:K06889,ko:K07397	-	-	-	-	ko00000	-	-	-	Fer4_19,Hydrolase_4,OsmC
BYD3_k127_754624_6	269798.CHU_1082	5.181e-24	102.0	COG1765@1|root,COG1765@2|Bacteria,4NFWN@976|Bacteroidetes,47QVZ@768503|Cytophagia	976|Bacteroidetes	O	OsmC-like protein	-	-	-	ko:K06889,ko:K07397	-	-	-	-	ko00000	-	-	-	Fer4_19,Hydrolase_4,OsmC
BYD3_k127_754624_5	1296416.JACB01000001_gene3375	6.486e-39	147.0	COG2207@1|root,COG2207@2|Bacteria,4NVDF@976|Bacteroidetes,1I3IW@117743|Flavobacteriia,2YKV7@290174|Aquimarina	976|Bacteroidetes	K	Transcriptional regulator	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_754624_0	1279009.ADICEAN_01512	1.037e-87	293.0	COG2217@1|root,COG2217@2|Bacteria,4NERS@976|Bacteroidetes,47M9X@768503|Cytophagia	976|Bacteroidetes	P	ATPase, P-type (transporting), HAD superfamily, subfamily IC	copB	-	3.6.3.4,3.6.3.54	ko:K01533,ko:K17686	ko01524,ko04016,map01524,map04016	-	R00086	RC00002	ko00000,ko00001,ko01000	3.A.3.5	-	-	E1-E2_ATPase,Hydrolase
BYD3_k127_755014_0	1237149.C900_01903	1.257e-143	475.0	COG0457@1|root,COG0457@2|Bacteria	1237149.C900_01903|-	S	peptidyl-tyrosine sulfation	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_755014_2	1237149.C900_01902	7.568e-90	305.0	COG0226@1|root,COG0226@2|Bacteria,4PKGM@976|Bacteroidetes	976|Bacteroidetes	P	Type IX secretion system membrane protein PorP/SprF	-	-	-	-	-	-	-	-	-	-	-	-	PorP_SprF
BYD3_k127_755014_1	1237149.C900_01901	1.155e-101	352.0	COG1520@1|root,COG4886@1|root,COG1520@2|Bacteria,COG4886@2|Bacteria,4PN7K@976|Bacteroidetes	976|Bacteroidetes	L	Leucine-rich repeat (LRR) protein	-	-	-	-	-	-	-	-	-	-	-	-	CHU_C,HYR
BYD3_k127_755014_3	153721.MYP_3970	1.698e-36	143.0	2FDT1@1|root,345TR@2|Bacteria,4P5ST@976|Bacteroidetes,47W7J@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_755014_4	926559.JoomaDRAFT_3615	1.134e-16	80.0	COG1680@1|root,COG1680@2|Bacteria,4NGZR@976|Bacteroidetes,1HXEI@117743|Flavobacteriia	976|Bacteroidetes	V	Beta-lactamase	-	-	-	-	-	-	-	-	-	-	-	-	Beta-lactamase
BYD3_k127_7557443_1	1237149.C900_00531	4.946e-78	266.0	COG1999@1|root,COG1999@2|Bacteria,4NFH2@976|Bacteroidetes,47NK1@768503|Cytophagia	976|Bacteroidetes	S	protein SCO1 SenC PrrC involved in biogenesis of respiratory and photosynthetic systems	-	-	-	ko:K07152	-	-	-	-	ko00000,ko03029	-	-	-	SCO1-SenC
BYD3_k127_7557443_3	1237149.C900_00532	3.666e-38	152.0	COG2010@1|root,COG2010@2|Bacteria,4NTWV@976|Bacteroidetes,47REP@768503|Cytophagia	976|Bacteroidetes	C	Cytochrome c, class I	aniA	-	-	-	-	-	-	-	-	-	-	-	Cytochrom_C,Cytochrome_CBB3
BYD3_k127_7557443_4	983544.Lacal_1947	5.85e-24	106.0	COG4704@1|root,COG4704@2|Bacteria,4NUS8@976|Bacteroidetes,1I45Z@117743|Flavobacteriia	976|Bacteroidetes	S	protein conserved in bacteria	-	-	-	-	-	-	-	-	-	-	-	-	DUF2141
BYD3_k127_7557443_2	700598.Niako_0548	4.007e-73	249.0	COG2080@1|root,COG2080@2|Bacteria,4NMVV@976|Bacteroidetes,1IXEY@117747|Sphingobacteriia	976|Bacteroidetes	C	COGs COG2080 Aerobic-type carbon monoxide dehydrogenase small subunit CoxS CutS homologs	-	-	1.3.99.16	ko:K07302	-	-	-	-	ko00000,ko01000	-	-	-	Fer2,Fer2_2
BYD3_k127_7557443_0	509635.N824_00495	7.603e-108	354.0	COG1529@1|root,COG1529@2|Bacteria,4NFFU@976|Bacteroidetes,1IR1H@117747|Sphingobacteriia	976|Bacteroidetes	C	PFAM Aldehyde oxidase xanthine dehydrogenase, molybdopterin binding	-	-	1.3.99.16	ko:K07303	-	-	-	-	ko00000,ko01000	-	-	-	Ald_Xan_dh_C2
BYD3_k127_7560994_2	929556.Solca_4327	1.212e-74	260.0	COG4641@1|root,COG4641@2|Bacteria,4NVGE@976|Bacteroidetes,1IV3P@117747|Sphingobacteriia	976|Bacteroidetes	S	Protein conserved in bacteria	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_7560994_0	929556.Solca_4326	7.048e-167	531.0	COG0451@1|root,COG0451@2|Bacteria,4NIBV@976|Bacteroidetes,1IVR2@117747|Sphingobacteriia	976|Bacteroidetes	GM	Male sterility protein	-	-	5.1.3.25	ko:K17947	ko00523,ko01130,map00523,map01130	-	R10279	RC00289	ko00000,ko00001,ko01000	-	-	-	Epimerase
BYD3_k127_7560994_3	421072.IO89_17465	2.203e-08	57.0	COG1061@1|root,COG4951@1|root,COG1061@2|Bacteria,COG4951@2|Bacteria,4NI8N@976|Bacteroidetes,1HZ7Z@117743|Flavobacteriia	976|Bacteroidetes	L	Type III restriction enzyme, res subunit	-	-	-	-	-	-	-	-	-	-	-	-	Helicase_C,ResIII
BYD3_k127_7560994_1	1122621.ATZA01000037_gene3507	4.497e-152	488.0	COG3746@1|root,COG3746@2|Bacteria,4NG5Z@976|Bacteroidetes,1INUQ@117747|Sphingobacteriia	976|Bacteroidetes	P	Phosphate-selective porin O and P	-	-	-	-	-	-	-	-	-	-	-	-	Porin_O_P
BYD3_k127_7562737_6	1089547.KB913013_gene3589	2.222e-80	273.0	COG1171@1|root,COG1171@2|Bacteria,4NFR5@976|Bacteroidetes,47KB0@768503|Cytophagia	976|Bacteroidetes	E	Pyridoxal-phosphate dependent enzyme	-	-	-	-	-	-	-	-	-	-	-	-	PALP
BYD3_k127_7562737_0	1279009.ADICEAN_00229	1.913e-182	578.0	COG0126@1|root,COG0126@2|Bacteria,4NFW2@976|Bacteroidetes,47K8V@768503|Cytophagia	976|Bacteroidetes	G	Belongs to the phosphoglycerate kinase family	pgk	-	2.7.2.3	ko:K00927	ko00010,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00710,map01100,map01110,map01120,map01130,map01200,map01230	M00001,M00002,M00003,M00165,M00166,M00308,M00552	R01512	RC00002,RC00043	ko00000,ko00001,ko00002,ko01000,ko04147	-	-	-	PGK
BYD3_k127_7562737_9	717606.PaecuDRAFT_4369	1.07e-11	69.0	2E4VC@1|root,32ZPM@2|Bacteria	2|Bacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	DUF2019
BYD3_k127_7562737_8	1124780.ANNU01000044_gene507	4.365e-53	189.0	COG0537@1|root,COG0537@2|Bacteria,4NQ4X@976|Bacteroidetes,47Q95@768503|Cytophagia	976|Bacteroidetes	FG	HIT family hydrolase	hinT	-	-	ko:K02503	-	-	-	-	ko00000,ko04147	-	-	-	HIT
BYD3_k127_7562737_7	1237149.C900_00641	9.189e-67	230.0	COG0782@1|root,COG0782@2|Bacteria,4NNH6@976|Bacteroidetes,47P7N@768503|Cytophagia	976|Bacteroidetes	K	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides	greA	-	-	ko:K03624	-	-	-	-	ko00000,ko03021	-	-	-	GreA_GreB,GreA_GreB_N
BYD3_k127_7562737_2	1237149.C900_00640	2.205e-140	450.0	COG1357@1|root,COG1357@2|Bacteria,4NY1Q@976|Bacteroidetes,47WKP@768503|Cytophagia	976|Bacteroidetes	S	Pentapeptide repeats (9 copies)	-	-	-	-	-	-	-	-	-	-	-	-	Pentapeptide
BYD3_k127_7562737_4	1120965.AUBV01000001_gene3152	1.456e-103	346.0	COG0111@1|root,COG0111@2|Bacteria,4NEMQ@976|Bacteroidetes,47K6J@768503|Cytophagia	976|Bacteroidetes	EH	D-isomer specific 2-hydroxyacid dehydrogenase	serA	-	1.1.1.399,1.1.1.95	ko:K00058	ko00260,ko00680,ko01100,ko01120,ko01130,ko01200,ko01230,map00260,map00680,map01100,map01120,map01130,map01200,map01230	M00020	R01513	RC00031	ko00000,ko00001,ko00002,ko01000,ko04147	-	-	-	2-Hacid_dh,2-Hacid_dh_C
BYD3_k127_7562737_1	1237149.C900_00638	1.456e-179	572.0	COG2239@1|root,COG2239@2|Bacteria,4NGGN@976|Bacteroidetes,47JTX@768503|Cytophagia	976|Bacteroidetes	P	Acts as a magnesium transporter	mgtE	-	-	ko:K06213	-	-	-	-	ko00000,ko02000	1.A.26.1	-	-	CBS,MgtE,MgtE_N
BYD3_k127_7562737_5	1279009.ADICEAN_02131	1.715e-93	313.0	COG0030@1|root,COG0030@2|Bacteria,4NERB@976|Bacteroidetes,47KWT@768503|Cytophagia	976|Bacteroidetes	J	Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits	ksgA	-	2.1.1.182	ko:K02528	-	-	R10716	RC00003,RC03257	ko00000,ko01000,ko03009	-	-	-	RrnaAD
BYD3_k127_7562737_3	1237149.C900_00636	4.278e-136	440.0	COG1995@1|root,COG1995@2|Bacteria,4NEUR@976|Bacteroidetes,47MC9@768503|Cytophagia	976|Bacteroidetes	H	Belongs to the PdxA family	pdxA	-	1.1.1.262	ko:K00097	ko00750,ko01100,map00750,map01100	M00124	R05681,R05837,R07406	RC00089,RC00675,RC01475	ko00000,ko00001,ko00002,ko01000	-	-	-	PdxA
BYD3_k127_7576095_0	1089547.KB913013_gene967	5.165e-247	786.0	COG0642@1|root,COG0745@1|root,COG3292@1|root,COG0745@2|Bacteria,COG2205@2|Bacteria,COG3292@2|Bacteria,4NDXU@976|Bacteroidetes,47JBS@768503|Cytophagia	976|Bacteroidetes	T	Two component regulator propeller	-	-	-	-	-	-	-	-	-	-	-	-	HATPase_c,HTH_18,HisKA,Reg_prop,Response_reg,Y_Y_Y
BYD3_k127_7576095_1	1341181.FLJC2902T_22430	2.106e-55	196.0	COG0262@1|root,COG0262@2|Bacteria,4NMP3@976|Bacteroidetes,1I84M@117743|Flavobacteriia,2P0EY@237|Flavobacterium	976|Bacteroidetes	H	Dihydrofolate reductase	-	-	1.5.1.3	ko:K00287	ko00670,ko00790,ko01100,ko01523,map00670,map00790,map01100,map01523	M00126,M00840	R00936,R00937,R00939,R00940,R02235,R02236,R11765	RC00109,RC00110,RC00158	ko00000,ko00001,ko00002,ko01000	-	-	-	RibD_C
BYD3_k127_7580657_0	761193.Runsl_2750	1.532e-257	803.0	COG2133@1|root,COG4654@1|root,COG2133@2|Bacteria,COG4654@2|Bacteria,4NEMM@976|Bacteroidetes,47KXP@768503|Cytophagia	976|Bacteroidetes	CG	PFAM Cytochrome c, class I	-	-	-	ko:K08738	ko00920,ko01100,ko01120,ko01524,ko02020,ko04115,ko04210,ko04214,ko04215,ko04932,ko05010,ko05012,ko05014,ko05016,ko05134,ko05145,ko05152,ko05161,ko05164,ko05167,ko05168,ko05200,ko05210,ko05222,ko05416,map00920,map01100,map01120,map01524,map02020,map04115,map04210,map04214,map04215,map04932,map05010,map05012,map05014,map05016,map05134,map05145,map05152,map05161,map05164,map05167,map05168,map05200,map05210,map05222,map05416	M00595	R10151	RC03151,RC03152	ko00000,ko00001,ko00002	3.D.4.6	-	-	Cytochrom_C,DUF1080,PA14
BYD3_k127_7580657_1	504472.Slin_5368	6.998e-230	719.0	COG4948@1|root,COG4948@2|Bacteria,4NFH1@976|Bacteroidetes,47MTW@768503|Cytophagia	976|Bacteroidetes	M	Enolase C-terminal domain-like	-	-	-	-	-	-	-	-	-	-	-	-	MR_MLE_C
BYD3_k127_7580657_2	760192.Halhy_3559	4.675e-196	626.0	COG3119@1|root,COG3119@2|Bacteria,4NEZJ@976|Bacteroidetes,1IWFX@117747|Sphingobacteriia	976|Bacteroidetes	P	Sulfatase	-	-	-	-	-	-	-	-	-	-	-	-	Sulfatase
BYD3_k127_7580657_3	1086011.HJ01_00868	1.301e-29	121.0	COG3345@1|root,COG3345@2|Bacteria,4NHAT@976|Bacteroidetes,1I8DT@117743|Flavobacteriia,2NUNI@237|Flavobacterium	976|Bacteroidetes	G	Glycosyl hydrolase family 36 N-terminal domain	-	-	3.2.1.22	ko:K07407	ko00052,ko00561,ko00600,ko00603,map00052,map00561,map00600,map00603	-	R01101,R01103,R01104,R01194,R01329,R02926,R03634,R04019,R04470,R05549,R05961,R06091	RC00049,RC00059,RC00451	ko00000,ko00001,ko01000	-	-	-	Glyco_hydro_36C,Glyco_hydro_36N,Melibiase
BYD3_k127_7587543_0	1121373.KB903632_gene508	3.472e-108	376.0	COG1520@1|root,COG1520@2|Bacteria,4NNUN@976|Bacteroidetes,47Q36@768503|Cytophagia	976|Bacteroidetes	G	Belongs to the glycosyl hydrolase 8 (cellulase D) family	-	-	-	-	-	-	-	-	-	-	-	-	He_PIG,I-set,Ig_3,SBBP
BYD3_k127_7587543_2	1123073.KB899244_gene186	2.664e-56	225.0	COG1470@1|root,COG3209@1|root,COG5184@1|root,COG1470@2|Bacteria,COG3209@2|Bacteria,COG5184@2|Bacteria,1N55D@1224|Proteobacteria,1T481@1236|Gammaproteobacteria,1XD8U@135614|Xanthomonadales	135614|Xanthomonadales	DMZ	IPT/TIG domain	-	-	-	-	-	-	-	-	-	-	-	-	TIG
BYD3_k127_7587543_5	1349785.BAUG01000004_gene291	4.878e-11	73.0	2CHYB@1|root,2Z83B@2|Bacteria,4NGDM@976|Bacteroidetes,1HZIJ@117743|Flavobacteriia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_7587543_1	903818.KI912268_gene852	3.415e-71	249.0	COG2834@1|root,COG4249@1|root,COG2834@2|Bacteria,COG4249@2|Bacteria	2|Bacteria	S	B-1 B cell differentiation	lolA	-	-	ko:K03634,ko:K14166	-	-	-	-	ko00000,ko02000	-	-	-	Cadherin,LolA,PPC,Peptidase_C14
BYD3_k127_7587543_3	1237149.C900_01776	3.693e-53	188.0	COG0403@1|root,COG1003@1|root,COG0403@2|Bacteria,COG1003@2|Bacteria,4NEDE@976|Bacteroidetes,47K29@768503|Cytophagia	976|Bacteroidetes	E	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor	gcvP	-	1.4.4.2	ko:K00281,ko:K00283	ko00260,ko00630,ko01100,ko01110,ko01130,ko01200,map00260,map00630,map01100,map01110,map01130,map01200	M00532	R01221,R03425	RC00022,RC00929,RC02834,RC02880	ko00000,ko00001,ko00002,ko01000	-	-	-	Aminotran_5,GDC-P
BYD3_k127_7598658_6	1122918.KB907280_gene254	2.152e-83	299.0	COG3934@1|root,COG3934@2|Bacteria,1VUFZ@1239|Firmicutes	1239|Firmicutes	G	Domain of unknown function (DUF5060)	-	-	-	-	-	-	-	-	-	-	-	-	DUF5060
BYD3_k127_7598658_0	509635.N824_27135	1.205e-155	500.0	COG0738@1|root,COG0738@2|Bacteria,4NFHM@976|Bacteroidetes	976|Bacteroidetes	G	Major facilitator superfamily	-	-	-	-	-	-	-	-	-	-	-	-	MFS_1
BYD3_k127_7598658_1	1122605.KB893637_gene3057	1.095e-108	357.0	COG0384@1|root,COG0384@2|Bacteria,4NEWM@976|Bacteroidetes,1IP44@117747|Sphingobacteriia	976|Bacteroidetes	S	Phenazine biosynthesis-like protein	-	-	-	-	-	-	-	-	-	-	-	-	PhzC-PhzF
BYD3_k127_7598658_8	925409.KI911562_gene1288	4.804e-22	100.0	COG3794@1|root,COG3794@2|Bacteria,4NUWE@976|Bacteroidetes	976|Bacteroidetes	C	PFAM Copper binding proteins, plastocyanin azurin family	-	-	-	-	-	-	-	-	-	-	-	-	Copper-bind,Cupredoxin_1
BYD3_k127_7598658_7	1453498.LG45_16120	2.205e-58	208.0	COG3652@1|root,COG3652@2|Bacteria,4NP09@976|Bacteroidetes,1I2DD@117743|Flavobacteriia	976|Bacteroidetes	S	Domain of unknown function (DUF4142)	-	-	-	ko:K08995	-	-	-	-	ko00000	-	-	-	DUF4142
BYD3_k127_7598658_3	926559.JoomaDRAFT_2263	1.192e-90	304.0	COG0705@1|root,COG0705@2|Bacteria,4NIYR@976|Bacteroidetes,1HX94@117743|Flavobacteriia	976|Bacteroidetes	S	Rhomboid family	-	-	3.4.21.105	ko:K09650	-	-	-	-	ko00000,ko01000,ko01002,ko03029	-	-	-	Rhomboid
BYD3_k127_7598658_2	929562.Emtol_3346	5.2e-97	329.0	COG2935@1|root,COG2935@2|Bacteria,4NGKN@976|Bacteroidetes,47PCC@768503|Cytophagia	976|Bacteroidetes	O	Belongs to the R-transferase family	ate	-	2.3.2.29	ko:K21420	-	-	R11547,R11548	RC00064	ko00000,ko01000	-	-	-	ATE_C,ATE_N
BYD3_k127_7598658_5	1237149.C900_04562	5.211e-87	298.0	COG3250@1|root,COG3250@2|Bacteria,4NN59@976|Bacteroidetes	976|Bacteroidetes	G	beta-galactosidase activity	-	-	-	-	-	-	-	-	-	-	-	-	BetaGal_dom4_5
BYD3_k127_7598658_4	945713.IALB_2692	3.573e-90	309.0	COG3250@1|root,COG3250@2|Bacteria	2|Bacteria	G	beta-galactosidase activity	-	-	3.1.1.53	ko:K05970	-	-	-	-	ko00000,ko01000	-	-	-	BetaGal_dom4_5,F5_F8_type_C
BYD3_k127_7606678_2	388413.ALPR1_19733	4.573e-185	592.0	COG4206@1|root,COG4206@2|Bacteria,4P258@976|Bacteroidetes,47Y44@768503|Cytophagia	976|Bacteroidetes	P	PFAM TonB-dependent Receptor Plug	-	-	-	-	-	-	-	-	-	-	-	-	CarbopepD_reg_2,Plug,TonB_dep_Rec
BYD3_k127_7606678_4	1237149.C900_01381	2.649e-133	434.0	COG1609@1|root,COG1609@2|Bacteria,4NDW6@976|Bacteroidetes,47MGC@768503|Cytophagia	976|Bacteroidetes	K	PFAM Periplasmic binding protein LacI transcriptional regulator	cytR	-	-	ko:K02529,ko:K05499	-	-	-	-	ko00000,ko03000	-	-	-	LacI,Peripla_BP_1,Peripla_BP_3
BYD3_k127_7606678_0	1237149.C900_04352	0.0	1021.0	COG1501@1|root,COG1501@2|Bacteria,4NE1H@976|Bacteroidetes,47NQ6@768503|Cytophagia	976|Bacteroidetes	G	Belongs to the glycosyl hydrolase 31 family	-	-	3.2.1.20	ko:K01187	ko00052,ko00500,ko01100,map00052,map00500,map01100	-	R00028,R00801,R00802,R06087,R06088	RC00028,RC00049,RC00077	ko00000,ko00001,ko01000	-	GH31	-	DUF4968,DUF5110,Gal_mutarotas_2,Glyco_hydro_31
BYD3_k127_7606678_1	927658.AJUM01000024_gene2518	5.034e-197	623.0	COG2211@1|root,COG2211@2|Bacteria,4NE3F@976|Bacteroidetes,2FMUY@200643|Bacteroidia,3XIQI@558415|Marinilabiliaceae	976|Bacteroidetes	G	MFS/sugar transport protein	-	-	-	ko:K16211	-	-	-	-	ko00000,ko02000	2.A.2.6	-	-	MFS_1,MFS_2
BYD3_k127_7606678_3	1237149.C900_04349	4.415e-146	472.0	COG0457@1|root,COG0457@2|Bacteria,4PJN4@976|Bacteroidetes,47NZ0@768503|Cytophagia	976|Bacteroidetes	S	Tetratricopeptide repeat	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_7606678_5	945713.IALB_0205	1.154e-84	286.0	COG0225@1|root,COG0225@2|Bacteria	2|Bacteria	O	peptide-methionine (S)-S-oxide reductase activity	msrA	-	1.8.4.11	ko:K07304	-	-	-	-	ko00000,ko01000	-	-	-	PMSR
BYD3_k127_7606678_6	313606.M23134_04372	1.152e-58	208.0	COG1595@1|root,COG1595@2|Bacteria,4NMAK@976|Bacteroidetes,47P7T@768503|Cytophagia	976|Bacteroidetes	K	TIGRFAM RNA polymerase sigma factor, sigma-70 family	-	-	-	ko:K03088	-	-	-	-	ko00000,ko03021	-	-	-	Sigma70_r2,Sigma70_r4_2
BYD3_k127_7610044_7	234267.Acid_4777	1.415e-51	196.0	COG0642@1|root,COG0745@1|root,COG3292@1|root,COG0745@2|Bacteria,COG2205@2|Bacteria,COG3292@2|Bacteria,3Y2ZI@57723|Acidobacteria	57723|Acidobacteria	T	Two component regulator propeller	-	-	-	-	-	-	-	-	-	-	-	-	HATPase_c,HisKA_3,Reg_prop,Y_Y_Y
BYD3_k127_7610044_8	452637.Oter_4497	9.549e-05	48.0	COG2197@1|root,COG2197@2|Bacteria,46Y47@74201|Verrucomicrobia,3K8WR@414999|Opitutae	414999|Opitutae	K	helix_turn_helix, Lux Regulon	-	-	-	-	-	-	-	-	-	-	-	-	GerE,Response_reg
BYD3_k127_7610044_1	1189619.pgond44_14078	6.927e-152	505.0	COG4191@1|root,COG4191@2|Bacteria,4NEJX@976|Bacteroidetes,1I0JH@117743|Flavobacteriia	976|Bacteroidetes	T	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase	-	-	-	-	-	-	-	-	-	-	-	-	7TMR-DISMED2,7TMR-DISM_7TM,GAF_2,HATPase_c,HisKA
BYD3_k127_7610044_2	1123248.KB893326_gene1521	9.267e-142	475.0	COG4191@1|root,COG4191@2|Bacteria,4NEJX@976|Bacteroidetes,1IQBI@117747|Sphingobacteriia	976|Bacteroidetes	T	Signal transduction histidine kinase, subgroup 1, dimerisation phosphoacceptor	-	-	-	-	-	-	-	-	-	-	-	-	HATPase_c,HisKA,TPR_12
BYD3_k127_7610044_6	1123248.KB893350_gene2907	1.199e-125	427.0	COG4191@1|root,COG4191@2|Bacteria,4NEJX@976|Bacteroidetes,1IVE0@117747|Sphingobacteriia	976|Bacteroidetes	T	His Kinase A (phosphoacceptor) domain	-	-	-	-	-	-	-	-	-	-	-	-	HATPase_c,HisKA,TPR_12,TPR_8
BYD3_k127_7610044_4	1123248.KB893352_gene1783	5.034e-132	445.0	COG4191@1|root,COG4191@2|Bacteria,4NEJX@976|Bacteroidetes	976|Bacteroidetes	T	Histidine kinase	-	-	-	-	-	-	-	-	-	-	-	-	HATPase_c,HisKA,TPR_12,TPR_8
BYD3_k127_7610044_5	1123248.KB893350_gene2906	2.922e-128	434.0	COG4191@1|root,COG4191@2|Bacteria,4NEJX@976|Bacteroidetes	976|Bacteroidetes	T	Histidine kinase	-	-	-	-	-	-	-	-	-	-	-	-	HATPase_c,HisKA,TPR_12,TPR_8
BYD3_k127_7610044_0	1121875.KB907550_gene639	2.787e-253	824.0	COG4191@1|root,COG4191@2|Bacteria,4NEJX@976|Bacteroidetes,1I0JH@117743|Flavobacteriia	976|Bacteroidetes	T	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase	-	-	-	-	-	-	-	-	-	-	-	-	7TMR-DISMED2,7TMR-DISM_7TM,HATPase_c,HisKA,SnoaL_3
BYD3_k127_7610044_3	1123037.AUDE01000005_gene3088	8.476e-139	474.0	COG4191@1|root,COG4191@2|Bacteria,4NEJX@976|Bacteroidetes,1I0JH@117743|Flavobacteriia	976|Bacteroidetes	T	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase	-	-	-	-	-	-	-	-	-	-	-	-	7TMR-DISMED2,7TMR-DISM_7TM,HATPase_c,HisKA,SnoaL_3
BYD3_k127_7611129_1	760192.Halhy_0752	3.259e-92	304.0	COG0129@1|root,COG0129@2|Bacteria,4NEKY@976|Bacteroidetes,1IQEN@117747|Sphingobacteriia	976|Bacteroidetes	EG	Belongs to the IlvD Edd family	-	-	-	-	-	-	-	-	-	-	-	-	ILVD_EDD
BYD3_k127_7611129_0	509635.N824_23405	1.834e-99	334.0	COG0673@1|root,COG0673@2|Bacteria,4NFY3@976|Bacteroidetes,1IQ2G@117747|Sphingobacteriia	976|Bacteroidetes	S	Oxidoreductase family, C-terminal alpha beta domain	-	-	-	-	-	-	-	-	-	-	-	-	GFO_IDH_MocA,GFO_IDH_MocA_C
BYD3_k127_7611129_2	1123277.KB893172_gene829	8.666e-49	179.0	COG4430@1|root,COG4430@2|Bacteria,4NQAJ@976|Bacteroidetes,47QIH@768503|Cytophagia	976|Bacteroidetes	S	Bacteriocin-protection, YdeI or OmpD-Associated	-	-	-	-	-	-	-	-	-	-	-	-	OmdA
BYD3_k127_7611129_3	1123248.KB893315_gene2987	1.259e-46	173.0	COG4430@1|root,COG4430@2|Bacteria,4NR0U@976|Bacteroidetes,1IT28@117747|Sphingobacteriia	976|Bacteroidetes	S	Domain of unknown function (DUF1905)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1905,OmdA
BYD3_k127_7611129_5	1121859.KB890756_gene1478	1.751e-40	154.0	COG1846@1|root,COG1846@2|Bacteria,4NQ5T@976|Bacteroidetes,47QE6@768503|Cytophagia	976|Bacteroidetes	K	transcriptional regulator	-	-	-	-	-	-	-	-	-	-	-	-	MarR,MarR_2
BYD3_k127_7611129_4	1237149.C900_02591	1.694e-42	165.0	COG0577@1|root,COG0577@2|Bacteria,4NKYD@976|Bacteroidetes,47MU6@768503|Cytophagia	976|Bacteroidetes	V	MacB-like periplasmic core domain	-	-	-	-	-	-	-	-	-	-	-	-	FtsX,MacB_PCD
BYD3_k127_7612941_4	760192.Halhy_3107	1.901e-07	54.0	2AC8D@1|root,311T2@2|Bacteria,4NXA6@976|Bacteroidetes	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_7612941_1	1249997.JHZW01000003_gene3209	1.237e-143	497.0	COG3292@1|root,COG4191@1|root,COG3292@2|Bacteria,COG4191@2|Bacteria,4NEJX@976|Bacteroidetes,1I0JH@117743|Flavobacteriia	976|Bacteroidetes	T	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase	-	-	-	-	-	-	-	-	-	-	-	-	7TMR-DISMED2,7TMR-DISM_7TM,HATPase_c,HisKA,Reg_prop,Y_Y_Y
BYD3_k127_7612941_3	760192.Halhy_3107	3.65e-106	349.0	2AC8D@1|root,311T2@2|Bacteria,4NXA6@976|Bacteroidetes	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_7612941_2	760192.Halhy_4312	8.792e-115	377.0	COG2220@1|root,COG2220@2|Bacteria,4PBVG@976|Bacteroidetes,1IZA4@117747|Sphingobacteriia	976|Bacteroidetes	S	Beta-lactamase superfamily domain	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_7612941_0	760192.Halhy_4313	3.197e-166	525.0	COG0620@1|root,COG0620@2|Bacteria,4NF5S@976|Bacteroidetes,1IQYW@117747|Sphingobacteriia	976|Bacteroidetes	E	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation	metE	-	2.1.1.14	ko:K00549	ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230	M00017	R04405,R09365	RC00035,RC00113,RC01241	ko00000,ko00001,ko00002,ko01000	-	-	-	Meth_synt_1,Meth_synt_2
BYD3_k127_7618950_3	1120968.AUBX01000011_gene3217	9.44e-62	213.0	COG0472@1|root,COG0472@2|Bacteria,4NE0T@976|Bacteroidetes,47KEP@768503|Cytophagia	976|Bacteroidetes	M	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan	mraY	-	2.7.8.13	ko:K01000	ko00550,ko01100,ko01502,map00550,map01100,map01502	-	R05629,R05630	RC00002,RC02753	ko00000,ko00001,ko01000,ko01011	9.B.146	-	-	Glycos_transf_4,MraY_sig1
BYD3_k127_7618950_1	1237149.C900_02233	1.102e-165	533.0	COG0771@1|root,COG0771@2|Bacteria,4NEFF@976|Bacteroidetes,47KTX@768503|Cytophagia	976|Bacteroidetes	M	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)	murD	-	6.3.2.9	ko:K01925	ko00471,ko00550,ko01100,map00471,map00550,map01100	-	R02783	RC00064,RC00141	ko00000,ko00001,ko01000,ko01011	-	-	-	Mur_ligase_C,Mur_ligase_M
BYD3_k127_7618950_0	1237149.C900_02232	7.471e-183	578.0	COG0772@1|root,COG0772@2|Bacteria,4NFIM@976|Bacteroidetes,47K3R@768503|Cytophagia	976|Bacteroidetes	D	Belongs to the SEDS family	ftsW	-	-	ko:K03588	ko04112,map04112	-	-	-	ko00000,ko00001,ko02000,ko03036	2.A.103.1	-	-	FTSW_RODA_SPOVE
BYD3_k127_7618950_2	1237149.C900_02231	8.393e-122	396.0	COG0707@1|root,COG0707@2|Bacteria,4NE6D@976|Bacteroidetes,47JXF@768503|Cytophagia	976|Bacteroidetes	M	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)	murG	-	2.4.1.227	ko:K02563	ko00550,ko01100,ko01502,ko04112,map00550,map01100,map01502,map04112	-	R05032,R05662	RC00005,RC00049	ko00000,ko00001,ko01000,ko01011	-	GT28	-	Glyco_tran_28_C,Glyco_transf_28
BYD3_k127_7622514_3	1121904.ARBP01000014_gene19	1.551e-69	243.0	COG2159@1|root,COG2159@2|Bacteria,4NG9U@976|Bacteroidetes,47MDV@768503|Cytophagia	976|Bacteroidetes	S	PFAM Amidohydrolase 2	-	-	-	-	-	-	-	-	-	-	-	-	Amidohydro_2
BYD3_k127_7622514_0	929713.NIASO_00660	2.165e-155	499.0	COG4299@1|root,COG4299@2|Bacteria,4NH8T@976|Bacteroidetes,1INPE@117747|Sphingobacteriia	976|Bacteroidetes	S	COGs COG4299 conserved	-	-	-	-	-	-	-	-	-	-	-	-	DUF5009
BYD3_k127_7622514_1	616991.JPOO01000001_gene3119	5.212e-152	489.0	COG2159@1|root,COG2159@2|Bacteria,4NG9U@976|Bacteroidetes,1HYFP@117743|Flavobacteriia,23FZX@178469|Arenibacter	976|Bacteroidetes	S	Amidohydrolase	-	-	-	-	-	-	-	-	-	-	-	-	Amidohydro_2
BYD3_k127_7622514_2	1123248.KB893325_gene1155	1.495e-125	411.0	COG2334@1|root,COG2334@2|Bacteria,4NH00@976|Bacteroidetes,1INVB@117747|Sphingobacteriia	976|Bacteroidetes	S	PFAM Aminoglycoside phosphotransferase	mdsC	-	-	-	-	-	-	-	-	-	-	-	APH
BYD3_k127_7630963_0	1237149.C900_04427	1.366e-236	750.0	COG0577@1|root,COG0577@2|Bacteria,4NDUK@976|Bacteroidetes,47UBY@768503|Cytophagia	976|Bacteroidetes	V	MacB-like periplasmic core domain	-	-	-	ko:K02004	-	M00258	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	FtsX,MacB_PCD
BYD3_k127_7630963_4	1123277.KB893176_gene3732	3.278e-147	482.0	COG3653@1|root,COG3653@2|Bacteria,4NHDD@976|Bacteroidetes,47KC3@768503|Cytophagia	976|Bacteroidetes	Q	PFAM D-aminoacylase, C-terminal region	-	-	-	-	-	-	-	-	-	-	-	-	Amidohydro_1,Amidohydro_3
BYD3_k127_7630963_9	1123277.KB893176_gene3731	6.632e-27	126.0	COG3653@1|root,COG3653@2|Bacteria	2|Bacteria	Q	N-Acyl-D-aspartate D-glutamate deacylase	-	-	3.5.2.3	ko:K01465	ko00240,ko01100,map00240,map01100	M00051	R01993	RC00632	ko00000,ko00001,ko00002,ko01000	-	-	-	Amidohydro_1,Amidohydro_3
BYD3_k127_7630963_6	1123248.KB893324_gene1713	3.663e-95	317.0	COG1028@1|root,COG1028@2|Bacteria,4NI46@976|Bacteroidetes,1IVPM@117747|Sphingobacteriia	976|Bacteroidetes	IQ	KR domain	-	-	-	-	-	-	-	-	-	-	-	-	adh_short
BYD3_k127_7630963_2	331869.BAL199_19538	1.517e-170	541.0	COG0473@1|root,COG0473@2|Bacteria,1MUH4@1224|Proteobacteria,2TSBB@28211|Alphaproteobacteria,4BP9J@82117|unclassified Alphaproteobacteria	28211|Alphaproteobacteria	CE	Isocitrate isopropylmalate dehydrogenase	MA20_16515	-	1.1.1.83,1.1.1.93,4.1.1.73	ko:K07246	ko00630,ko00650,map00630,map00650	-	R00215,R01751,R02545,R06180	RC00084,RC00105,RC00594	ko00000,ko00001,ko01000	-	-	-	Iso_dh
BYD3_k127_7630963_3	1392498.JQLH01000001_gene3635	1.248e-163	527.0	COG0471@1|root,COG0471@2|Bacteria,4NFDK@976|Bacteroidetes,1HX3U@117743|Flavobacteriia,2PIED@252356|Maribacter	976|Bacteroidetes	P	Sodium:sulfate symporter transmembrane region	-	-	-	ko:K14445	-	-	-	-	ko00000,ko02000	2.A.47.1	-	-	Na_sulph_symp
BYD3_k127_7630963_7	1123277.KB893173_gene1829	1.555e-67	244.0	COG1312@1|root,COG1312@2|Bacteria,4NIMS@976|Bacteroidetes,47JVK@768503|Cytophagia	976|Bacteroidetes	G	D-mannonate dehydratase (UxuA)	-	-	4.2.1.8	ko:K01686	ko00040,ko01100,map00040,map01100	M00061	R05606	RC00543	ko00000,ko00001,ko00002,ko01000	-	-	-	UxuA
BYD3_k127_7630963_5	485917.Phep_0335	3.48e-110	367.0	COG4454@1|root,COG4454@2|Bacteria,4PN5Y@976|Bacteroidetes,1IVEJ@117747|Sphingobacteriia	976|Bacteroidetes	P	PFAM Copper binding proteins, plastocyanin azurin family	-	-	-	-	-	-	-	-	-	-	-	-	Copper-bind
BYD3_k127_7630963_1	485917.Phep_0336	5.296e-184	589.0	COG2133@1|root,COG2133@2|Bacteria,4NI97@976|Bacteroidetes,1IWTQ@117747|Sphingobacteriia	976|Bacteroidetes	G	pyrroloquinoline quinone binding	-	-	-	-	-	-	-	-	-	-	-	-	GSDH
BYD3_k127_7630963_8	1123248.KB893333_gene2824	4.026e-59	207.0	2AY99@1|root,31QBJ@2|Bacteria,4NNSA@976|Bacteroidetes	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	GIY-YIG
BYD3_k127_7640038_7	1313421.JHBV01000022_gene4696	1.575e-29	130.0	COG0642@1|root,COG2205@2|Bacteria,4NEFW@976|Bacteroidetes,1IS7E@117747|Sphingobacteriia	976|Bacteroidetes	T	Histidine kinase	-	-	2.7.13.3	ko:K07636	ko02020,map02020	M00434	-	-	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	-	-	-	HATPase_c,HisKA
BYD3_k127_7640038_9	1237149.C900_03902	6.946e-18	84.0	2EK5G@1|root,33DVX@2|Bacteria,4PA8R@976|Bacteroidetes,47SYN@768503|Cytophagia	976|Bacteroidetes	S	Domain of unknown function (DUF4405)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4405
BYD3_k127_7640038_1	1237149.C900_03902	1.444e-91	310.0	2EK5G@1|root,33DVX@2|Bacteria,4PA8R@976|Bacteroidetes,47SYN@768503|Cytophagia	976|Bacteroidetes	S	Domain of unknown function (DUF4405)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4405
BYD3_k127_7640038_4	714943.Mucpa_4075	2.805e-48	178.0	COG0431@1|root,COG0431@2|Bacteria,4NQ3Y@976|Bacteroidetes,1ISVG@117747|Sphingobacteriia	976|Bacteroidetes	S	PFAM NADPH-dependent FMN reductase	-	-	-	-	-	-	-	-	-	-	-	-	FMN_red
BYD3_k127_7640038_3	1202532.FF52_05725	3.418e-54	197.0	COG1595@1|root,COG1595@2|Bacteria,4NU6U@976|Bacteroidetes,1I42V@117743|Flavobacteriia,2NXKP@237|Flavobacterium	976|Bacteroidetes	K	Belongs to the sigma-70 factor family. ECF subfamily	-	-	-	ko:K03088	-	-	-	-	ko00000,ko03021	-	-	-	Sigma70_r2,Sigma70_r4_2
BYD3_k127_7640038_6	314270.RB2083_4031	2.271e-37	155.0	COG0477@1|root,COG2814@2|Bacteria,1MW1P@1224|Proteobacteria	1224|Proteobacteria	EGP	Major facilitator Superfamily	-	-	-	-	-	-	-	-	-	-	-	-	MFS_1
BYD3_k127_7640038_0	1443665.JACA01000034_gene2486	5.471e-179	570.0	COG0492@1|root,COG0492@2|Bacteria,4NJFI@976|Bacteroidetes,1IHGP@117743|Flavobacteriia,2YH76@290174|Aquimarina	976|Bacteroidetes	O	L-lysine 6-monooxygenase (NADPH-requiring)	-	-	-	-	-	-	-	-	-	-	-	-	Pyr_redox_3
BYD3_k127_7640038_2	926549.KI421517_gene1741	5.454e-63	222.0	COG2010@1|root,COG2010@2|Bacteria,4NQXA@976|Bacteroidetes,47QS4@768503|Cytophagia	976|Bacteroidetes	C	Cytochrome c	-	-	-	-	-	-	-	-	-	-	-	-	Cytochrom_C
BYD3_k127_7640038_5	1121904.ARBP01000009_gene4158	9.226e-42	163.0	COG3279@1|root,COG3279@2|Bacteria,4NKFH@976|Bacteroidetes,47V9N@768503|Cytophagia	976|Bacteroidetes	KT	LytTr DNA-binding domain	-	-	-	-	-	-	-	-	-	-	-	-	LytTR
BYD3_k127_7640897_4	483215.BACFIN_07837	3.711e-39	153.0	COG2843@1|root,COG2843@2|Bacteria,4NGD2@976|Bacteroidetes,2FQ0M@200643|Bacteroidia,4AMPS@815|Bacteroidaceae	976|Bacteroidetes	M	Bacterial capsule synthesis protein	-	-	-	ko:K07282	-	-	-	-	ko00000	-	-	-	PGA_cap
BYD3_k127_7640897_2	880072.Desac_2271	6.788e-118	390.0	COG0075@1|root,COG0075@2|Bacteria,1MWHJ@1224|Proteobacteria,42MBH@68525|delta/epsilon subdivisions,2WK6J@28221|Deltaproteobacteria,2MRKP@213462|Syntrophobacterales	28221|Deltaproteobacteria	H	Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. PhnW subfamily	phnW	-	2.6.1.37,2.6.1.44,2.6.1.45,2.6.1.51	ko:K00830,ko:K03430	ko00250,ko00260,ko00440,ko00630,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko04146,map00250,map00260,map00440,map00630,map00680,map01100,map01110,map01120,map01130,map01200,map04146	M00346,M00532	R00369,R00372,R00585,R00588,R04152	RC00006,RC00008,RC00018,RC00062	ko00000,ko00001,ko00002,ko01000,ko01007	-	-	-	Aminotran_5
BYD3_k127_7640897_5	754027.HMPREF9554_00612	5.606e-34	143.0	COG5050@1|root,COG5050@2|Bacteria,2J6FJ@203691|Spirochaetes	203691|Spirochaetes	I	Belongs to the CDP-alcohol phosphatidyltransferase class-I family	-	-	-	-	-	-	-	-	-	-	-	-	CDP-OH_P_transf
BYD3_k127_7640897_0	1295642.H839_06464	2.046e-241	756.0	COG1213@1|root,COG2513@1|root,COG1213@2|Bacteria,COG2513@2|Bacteria,1TQVY@1239|Firmicutes,4HCDV@91061|Bacilli,1WH75@129337|Geobacillus	91061|Bacilli	GM	Phosphoenolpyruvate phosphomutase	-	-	5.4.2.9	ko:K01841	ko00440,ko01100,ko01120,ko01130,map00440,map01100,map01120,map01130	-	R00661	RC02792	ko00000,ko00001,ko01000	-	-	-	NTP_transf_3,PEP_mutase
BYD3_k127_7640897_1	666686.B1NLA3E_03310	1.219e-149	481.0	COG0028@1|root,COG4032@1|root,COG0028@2|Bacteria,COG4032@2|Bacteria,1TSJZ@1239|Firmicutes,4HDPN@91061|Bacilli,1ZDUN@1386|Bacillus	91061|Bacilli	EH	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain	-	-	4.1.1.82	ko:K09459	ko00440,ko01100,ko01120,ko01130,map00440,map01100,map01120,map01130	-	R04053	RC00506	ko00000,ko00001,ko01000	-	-	-	TPP_enzyme_C,TPP_enzyme_N
BYD3_k127_7640897_6	349520.PPE_04393	1.251e-07	53.0	COG0075@1|root,COG1213@1|root,COG0075@2|Bacteria,COG1213@2|Bacteria,1TPS0@1239|Firmicutes,4HBFN@91061|Bacilli,275N0@186822|Paenibacillaceae	91061|Bacilli	E	Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. PhnW subfamily	-	-	2.6.1.37	ko:K03430	ko00440,ko01100,ko01120,map00440,map01100,map01120	-	R04152	RC00008,RC00062	ko00000,ko00001,ko01000,ko01007	-	-	-	Aminotran_5
BYD3_k127_7669771_9	485918.Cpin_2441	9.162e-13	72.0	COG1595@1|root,COG1595@2|Bacteria,4NKX6@976|Bacteroidetes,1J0AJ@117747|Sphingobacteriia	976|Bacteroidetes	K	Sigma-70, region 4	-	-	-	-	-	-	-	-	-	-	-	-	Sigma70_r2,Sigma70_r4_2
BYD3_k127_7669771_7	388413.ALPR1_17088	8.258e-74	261.0	COG3712@1|root,COG3712@2|Bacteria,4NREY@976|Bacteroidetes,47Q61@768503|Cytophagia	976|Bacteroidetes	PT	Domain of unknown function (DUF4974)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4974,FecR
BYD3_k127_7669771_0	388413.ALPR1_17083	0.0	1691.0	COG1629@1|root,COG4771@2|Bacteria,4NDU8@976|Bacteroidetes,47Y4V@768503|Cytophagia	976|Bacteroidetes	P	TonB dependent receptor	-	-	-	-	-	-	-	-	-	-	-	-	CarbopepD_reg_2,Plug,STN,TonB_dep_Rec
BYD3_k127_7669771_4	388413.ALPR1_17078	6.165e-224	703.0	COG4198@1|root,COG4198@2|Bacteria,4NEAX@976|Bacteroidetes,47Y4U@768503|Cytophagia	976|Bacteroidetes	S	Starch-binding associating with outer membrane	-	-	-	-	-	-	-	-	-	-	-	-	SusD-like_2
BYD3_k127_7669771_5	761193.Runsl_5406	5.276e-176	554.0	COG0684@1|root,COG0684@2|Bacteria,4NF3M@976|Bacteroidetes,47KRJ@768503|Cytophagia	976|Bacteroidetes	H	Aldolase/RraA	-	-	-	-	-	-	-	-	-	-	-	-	RraA-like
BYD3_k127_7669771_3	1185876.BN8_04116	2.175e-230	718.0	COG4948@1|root,COG4948@2|Bacteria,4NIIJ@976|Bacteroidetes,47K75@768503|Cytophagia	976|Bacteroidetes	M	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain	-	-	4.2.1.6	ko:K01684	ko00052,ko01100,ko01120,map00052,map01100,map01120	M00552	R03033	RC00543	ko00000,ko00001,ko00002,ko01000	-	-	-	MR_MLE_C,MR_MLE_N
BYD3_k127_7669771_2	1123278.KB893511_gene1460	2.415e-261	809.0	COG4948@1|root,COG4948@2|Bacteria,4NI24@976|Bacteroidetes,47N24@768503|Cytophagia	976|Bacteroidetes	M	mandelate racemase muconate lactonizing	-	-	4.2.1.8	ko:K08323	ko00040,ko01100,map00040,map01100	M00061	R05606	RC00543	ko00000,ko00001,ko00002,ko01000	-	-	-	MR_MLE_C,MR_MLE_N
BYD3_k127_7669771_6	388413.ALPR1_17063	1.436e-159	507.0	COG0684@1|root,COG0684@2|Bacteria,4NF3M@976|Bacteroidetes,47JU7@768503|Cytophagia	976|Bacteroidetes	H	Aldolase/RraA	-	-	-	-	-	-	-	-	-	-	-	-	RraA-like
BYD3_k127_7669771_1	388413.ALPR1_17058	9.4e-275	850.0	COG4948@1|root,COG4948@2|Bacteria,4NE9A@976|Bacteroidetes,47NDY@768503|Cytophagia	976|Bacteroidetes	M	Mandelate racemase / muconate lactonizing enzyme, N-terminal domain	-	-	-	-	-	-	-	-	-	-	-	-	MR_MLE_C,MR_MLE_N
BYD3_k127_7669771_8	1279009.ADICEAN_01345	2.407e-59	209.0	COG0462@1|root,COG0462@2|Bacteria,4NEVF@976|Bacteroidetes,47MGR@768503|Cytophagia	976|Bacteroidetes	EF	Ribose-phosphate pyrophosphokinase	-	-	2.7.6.1	ko:K00948	ko00030,ko00230,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00230,map01100,map01110,map01120,map01130,map01200,map01230	M00005	R01049	RC00002,RC00078	ko00000,ko00001,ko00002,ko01000	-	-	-	Pribosyl_synth,Pribosyltran_N
BYD3_k127_7672109_3	1237149.C900_01723	7.934e-102	346.0	COG2067@1|root,COG2067@2|Bacteria,4NEP1@976|Bacteroidetes,47N37@768503|Cytophagia	976|Bacteroidetes	I	membrane	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_7672109_5	1237149.C900_01722	3.505e-69	242.0	COG1521@1|root,COG1521@2|Bacteria,4NE9E@976|Bacteroidetes,47K36@768503|Cytophagia	976|Bacteroidetes	H	Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis	coaX	-	2.7.1.33	ko:K03525	ko00770,ko01100,map00770,map01100	M00120	R02971,R03018,R04391	RC00002,RC00017	ko00000,ko00001,ko00002,ko01000	-	-	-	Pan_kinase
BYD3_k127_7672109_4	1237149.C900_01721	2.16e-99	336.0	COG2377@1|root,COG2377@2|Bacteria,4NFZU@976|Bacteroidetes,47NI9@768503|Cytophagia	976|Bacteroidetes	O	Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling	anmK	-	2.7.1.170	ko:K09001	-	-	-	-	ko00000,ko01000	-	-	-	AnmK
BYD3_k127_7672109_1	929703.KE386491_gene2315	2.286e-158	512.0	COG1055@1|root,COG1055@2|Bacteria,4NGP4@976|Bacteroidetes,47JIU@768503|Cytophagia	976|Bacteroidetes	P	Na H antiporter NhaD and related arsenite	nhaD	-	-	-	-	-	-	-	-	-	-	-	CitMHS
BYD3_k127_7672109_0	761193.Runsl_0033	6.465e-164	526.0	COG1055@1|root,COG1055@2|Bacteria,4NGP4@976|Bacteroidetes,47JIU@768503|Cytophagia	976|Bacteroidetes	P	Na H antiporter NhaD and related arsenite	nhaD	-	-	-	-	-	-	-	-	-	-	-	CitMHS
BYD3_k127_7672109_2	1237149.C900_03255	2.73e-134	434.0	COG0527@1|root,COG0527@2|Bacteria,4NFWR@976|Bacteroidetes,47KM0@768503|Cytophagia	976|Bacteroidetes	E	Belongs to the aspartokinase family	lysC	-	2.7.2.4	ko:K00928	ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01210,map01230	M00016,M00017,M00018,M00033,M00525,M00526,M00527	R00480	RC00002,RC00043	ko00000,ko00001,ko00002,ko01000	-	-	-	AA_kinase
BYD3_k127_7692462_1	1237149.C900_05646	3.235e-218	691.0	COG1109@1|root,COG1109@2|Bacteria,4NFU7@976|Bacteroidetes,47KI8@768503|Cytophagia	976|Bacteroidetes	G	Phosphoglucomutase phosphomannomutase alpha beta alpha domain I	pgcA	-	5.4.2.2	ko:K01835	ko00010,ko00030,ko00052,ko00230,ko00500,ko00520,ko00521,ko01100,ko01110,ko01120,ko01130,map00010,map00030,map00052,map00230,map00500,map00520,map00521,map01100,map01110,map01120,map01130	M00549	R00959,R01057,R08639	RC00408	ko00000,ko00001,ko00002,ko01000	-	-	-	PGM_PMM_I,PGM_PMM_II,PGM_PMM_III,PGM_PMM_IV
BYD3_k127_7692462_2	700598.Niako_4660	4.172e-45	168.0	COG2318@1|root,COG2318@2|Bacteria,4NQEI@976|Bacteroidetes,1IXPF@117747|Sphingobacteriia	976|Bacteroidetes	S	Protein of unknown function (DUF1572)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1572
BYD3_k127_7692462_0	1237149.C900_03608	2.73e-225	704.0	COG0621@1|root,COG0621@2|Bacteria,4NE0R@976|Bacteroidetes,47MPX@768503|Cytophagia	976|Bacteroidetes	J	TIGRFAM MiaB-like tRNA modifying enzyme	yqeV	-	2.8.4.5	ko:K18707	-	-	R10649	RC00003,RC03221	ko00000,ko01000,ko03016	-	-	-	Radical_SAM,UPF0004
BYD3_k127_7692462_3	626522.GCWU000325_02450	3.029e-42	156.0	COG1136@1|root,COG1136@2|Bacteria,4NGDU@976|Bacteroidetes,2FKZC@200643|Bacteroidia,1WCT6@1283313|Alloprevotella	976|Bacteroidetes	V	Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner	lolD	-	-	ko:K09810	ko02010,map02010	M00255	-	-	ko00000,ko00001,ko00002,ko01000,ko02000	3.A.1.125	-	-	ABC_tran
BYD3_k127_7693445_0	1305737.JAFX01000001_gene2945	1.827e-239	756.0	COG0574@1|root,COG1080@1|root,COG0574@2|Bacteria,COG1080@2|Bacteria,4NEHE@976|Bacteroidetes,47JHD@768503|Cytophagia	976|Bacteroidetes	G	Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate	ppsA	-	2.7.9.2	ko:K01007	ko00620,ko00680,ko00720,ko01100,ko01120,ko01200,map00620,map00680,map00720,map01100,map01120,map01200	M00173,M00374	R00199	RC00002,RC00015	ko00000,ko00001,ko00002,ko01000	-	-	-	PEP-utilizers,PEP-utilizers_C,PPDK_N
BYD3_k127_7693445_1	1237149.C900_02142	8.325e-110	365.0	COG0628@1|root,COG0628@2|Bacteria,4NFHZ@976|Bacteroidetes,47NU0@768503|Cytophagia	976|Bacteroidetes	S	AI-2E family transporter	-	-	-	-	-	-	-	-	-	-	-	-	AI-2E_transport
BYD3_k127_7693445_5	1492737.FEM08_35000	9.82e-14	72.0	2AF0Z@1|root,314Z9@2|Bacteria,4P7CF@976|Bacteroidetes,1IAXW@117743|Flavobacteriia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_7693445_3	1237149.C900_02143	4.773e-61	214.0	COG1764@1|root,COG1764@2|Bacteria,4P9T2@976|Bacteroidetes,47S0N@768503|Cytophagia	976|Bacteroidetes	O	OsmC-like protein	-	-	-	-	-	-	-	-	-	-	-	-	OsmC
BYD3_k127_7693445_4	760192.Halhy_1783	9.621e-54	196.0	2DI69@1|root,30258@2|Bacteria,4PJ1K@976|Bacteroidetes,1IZ7W@117747|Sphingobacteriia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_7693445_2	485918.Cpin_6595	6.377e-62	235.0	COG2989@1|root,COG2989@2|Bacteria,4NH3J@976|Bacteroidetes,1IVIF@117747|Sphingobacteriia	976|Bacteroidetes	S	L,D-transpeptidase catalytic domain	-	-	-	ko:K21470	-	-	-	-	ko00000,ko01002,ko01011	-	-	-	PG_binding_1,YkuD
BYD3_k127_7700537_0	1121904.ARBP01000030_gene1964	9.191e-225	710.0	COG0577@1|root,COG0577@2|Bacteria,4NDUK@976|Bacteroidetes,47MYR@768503|Cytophagia	976|Bacteroidetes	V	MacB-like periplasmic core domain	-	-	-	-	-	-	-	-	-	-	-	-	FtsX,MacB_PCD
BYD3_k127_7700537_5	1249997.JHZW01000002_gene398	1.183e-37	150.0	COG1629@1|root,COG1629@2|Bacteria,4NV7C@976|Bacteroidetes,1I3PS@117743|Flavobacteriia,2PI19@252356|Maribacter	976|Bacteroidetes	P	Carboxypeptidase regulatory-like domain	-	-	-	-	-	-	-	-	-	-	-	-	CarbopepD_reg_2,Plug
BYD3_k127_7700537_2	926562.Oweho_1240	9.282e-76	266.0	COG5279@1|root,COG5279@2|Bacteria,4NKJ4@976|Bacteroidetes,1HZ5K@117743|Flavobacteriia,2PB8F@246874|Cryomorphaceae	976|Bacteroidetes	D	Transglutaminase-like superfamily	-	-	-	-	-	-	-	-	-	-	-	-	Transglut_core
BYD3_k127_7700537_4	1121481.AUAS01000004_gene1370	2.469e-46	174.0	COG1309@1|root,COG1309@2|Bacteria,4NWG5@976|Bacteroidetes,47SV5@768503|Cytophagia	976|Bacteroidetes	K	Bacterial transcriptional repressor	-	-	-	-	-	-	-	-	-	-	-	-	TetR,TetR_N
BYD3_k127_7700537_6	421072.IO89_09355	4.621e-28	120.0	2DTJJ@1|root,33KNE@2|Bacteria,4NYVC@976|Bacteroidetes,1I6I8@117743|Flavobacteriia,3HIFZ@358033|Chryseobacterium	976|Bacteroidetes	S	Domain of unknown function (DUF1772)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1772
BYD3_k127_7700537_3	1121481.AUAS01000004_gene1371	6.058e-58	208.0	COG0662@1|root,COG0662@2|Bacteria,4NPEE@976|Bacteroidetes,47Y5F@768503|Cytophagia	976|Bacteroidetes	G	Cupin domain	-	-	-	-	-	-	-	-	-	-	-	-	Cupin_2
BYD3_k127_7700537_1	1185876.BN8_01434	1.102e-182	599.0	COG0577@1|root,COG0577@2|Bacteria,4NJII@976|Bacteroidetes,47KJS@768503|Cytophagia	976|Bacteroidetes	V	MacB-like periplasmic core domain	-	-	-	ko:K02004	-	M00258	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	FtsX,MacB_PCD
BYD3_k127_7708067_1	1121904.ARBP01000004_gene1059	2.644e-119	396.0	COG0577@1|root,COG0577@2|Bacteria,4NDUK@976|Bacteroidetes,47NTJ@768503|Cytophagia	976|Bacteroidetes	V	MacB-like periplasmic core domain	-	-	-	ko:K02004	-	M00258	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	FtsX,MacB_PCD
BYD3_k127_7708067_3	1237149.C900_04428	3.101e-42	157.0	COG1695@1|root,COG1695@2|Bacteria,4P48E@976|Bacteroidetes,47V9J@768503|Cytophagia	976|Bacteroidetes	K	Transcriptional regulator PadR-like family	-	-	-	-	-	-	-	-	-	-	-	-	PadR
BYD3_k127_7708067_0	1192034.CAP_1547	1.03e-168	541.0	COG0624@1|root,COG0624@2|Bacteria,1MWJS@1224|Proteobacteria,42STW@68525|delta/epsilon subdivisions,2WPBB@28221|Deltaproteobacteria,2YUQE@29|Myxococcales	28221|Deltaproteobacteria	E	Peptidase dimerisation domain	-	-	3.5.1.18	ko:K01439,ko:K13049	ko00300,ko01100,ko01120,ko01230,map00300,map01100,map01120,map01230	M00016	R02734	RC00064,RC00090	ko00000,ko00001,ko00002,ko01000,ko01002	-	-	-	M20_dimer,Peptidase_M20,Peptidase_M28
BYD3_k127_7708067_2	700598.Niako_4337	1.486e-62	222.0	COG0535@1|root,COG0535@2|Bacteria	2|Bacteria	I	radical SAM domain protein	pqqC	-	1.3.3.11	ko:K06137,ko:K06138	-	-	-	-	ko00000,ko01000	-	-	-	Fer4_12,Fer4_14,PqqD,Radical_SAM,SPASM,TENA_THI-4
BYD3_k127_7716248_2	1237149.C900_05454	5.013e-42	159.0	COG4886@1|root,COG4886@2|Bacteria,4NKMV@976|Bacteroidetes,47XBF@768503|Cytophagia	976|Bacteroidetes	S	Leucine-rich repeat (LRR) protein	-	-	-	ko:K13730	ko05100,map05100	-	-	-	ko00000,ko00001	-	-	-	COR,LRR_4,Roc,TIR_2
BYD3_k127_7716248_3	398720.MED217_11479	1.584e-07	60.0	COG0811@1|root,COG0811@2|Bacteria,4NVQH@976|Bacteroidetes,1I40C@117743|Flavobacteriia,2XKFJ@283735|Leeuwenhoekiella	976|Bacteroidetes	U	MotA/TolQ/ExbB proton channel family	-	-	-	-	-	-	-	-	-	-	-	-	MotA_ExbB
BYD3_k127_7716248_0	313606.M23134_05437	6.298e-76	267.0	COG2972@1|root,COG2972@2|Bacteria,4NH1Q@976|Bacteroidetes,47QMN@768503|Cytophagia	976|Bacteroidetes	T	Histidine kinase	-	-	-	-	-	-	-	-	-	-	-	-	HATPase_c_5,His_kinase
BYD3_k127_7716248_1	1168034.FH5T_22015	2.4e-70	245.0	COG3279@1|root,COG3279@2|Bacteria,4NI3K@976|Bacteroidetes,2FMT1@200643|Bacteroidia	976|Bacteroidetes	KT	domain protein	-	-	-	-	-	-	-	-	-	-	-	-	LytTR,Response_reg
BYD3_k127_7717409_0	1237149.C900_03736	2.314e-115	378.0	COG1162@1|root,COG1162@2|Bacteria,4NE5H@976|Bacteroidetes,47JC5@768503|Cytophagia	976|Bacteroidetes	S	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit	rsgA	-	3.1.3.100	ko:K06949	ko00730,ko01100,map00730,map01100	-	R00615,R02135	RC00002,RC00017	ko00000,ko00001,ko01000,ko03009	-	-	-	RsgA_GTPase,RsgA_N
BYD3_k127_7717409_1	1121957.ATVL01000007_gene1683	2.01e-72	256.0	COG1216@1|root,COG1216@2|Bacteria,4NJQR@976|Bacteroidetes,47MWK@768503|Cytophagia	976|Bacteroidetes	S	PFAM Glycosyl transferase family 2	-	-	-	-	-	-	-	-	-	-	-	-	Glycos_transf_2
BYD3_k127_7717409_3	1121373.KB903643_gene3416	9.668e-16	88.0	COG5653@1|root,COG5653@2|Bacteria,4NKJS@976|Bacteroidetes	976|Bacteroidetes	M	Protein involved in cellulose biosynthesis	-	-	-	-	-	-	-	-	-	-	-	-	Acetyltransf_6,FemAB
BYD3_k127_7717409_2	1237149.C900_04059	4.758e-66	227.0	COG4539@1|root,COG4539@2|Bacteria,4NQIX@976|Bacteroidetes,47Q6B@768503|Cytophagia	976|Bacteroidetes	S	Protein of unknown function (DUF962)	-	-	-	-	-	-	-	-	-	-	-	-	DUF962
BYD3_k127_7753822_1	1237149.C900_04994	1.542e-255	795.0	COG1418@1|root,COG1418@2|Bacteria,4NE3V@976|Bacteroidetes,47KJE@768503|Cytophagia	976|Bacteroidetes	S	Endoribonuclease that initiates mRNA decay	rny	-	-	ko:K18682	ko03018,map03018	-	-	-	ko00000,ko00001,ko01000,ko03019	-	-	-	DUF3552,HD,KH_1
BYD3_k127_7753822_3	700598.Niako_6794	3.751e-31	132.0	2E4RS@1|root,32ZKA@2|Bacteria,4PK7M@976|Bacteroidetes,1IU75@117747|Sphingobacteriia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_7753822_0	1185876.BN8_00257	0.0	1188.0	COG1629@1|root,COG4771@2|Bacteria,4NF4B@976|Bacteroidetes,47K68@768503|Cytophagia	976|Bacteroidetes	P	PFAM TonB-dependent Receptor Plug	-	-	-	-	-	-	-	-	-	-	-	-	CarbopepD_reg_2,Plug,TonB_dep_Rec
BYD3_k127_7753822_2	1227739.Hsw_3291	5.721e-77	271.0	28I8D@1|root,2Z8B7@2|Bacteria,4NM23@976|Bacteroidetes,47NIB@768503|Cytophagia	976|Bacteroidetes	S	Domain of unknown function (DUF4249)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4249
BYD3_k127_7754012_0	761193.Runsl_0627	3.5e-322	999.0	COG2010@1|root,COG2133@1|root,COG2010@2|Bacteria,COG2133@2|Bacteria,4NH6W@976|Bacteroidetes,47K4F@768503|Cytophagia	976|Bacteroidetes	CG	Cytochrome c	-	-	-	-	-	-	-	-	-	-	-	-	Cytochrom_C
BYD3_k127_7754012_6	143224.JQMD01000002_gene1739	9.179e-110	361.0	COG2133@1|root,COG2133@2|Bacteria,4NFXB@976|Bacteroidetes,1I02S@117743|Flavobacteriia	976|Bacteroidetes	G	Domain of Unknown Function (DUF1080)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1080
BYD3_k127_7754012_4	504472.Slin_0967	1.313e-174	553.0	COG2017@1|root,COG2017@2|Bacteria,4NHQH@976|Bacteroidetes,47JMF@768503|Cytophagia	976|Bacteroidetes	G	Domain of unknown function (DUF4432)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4432
BYD3_k127_7754012_1	1185876.BN8_00376	6.277e-240	744.0	COG1482@1|root,COG1482@2|Bacteria,4NGGP@976|Bacteroidetes,47NZ6@768503|Cytophagia	976|Bacteroidetes	G	cell wall glycoprotein biosynthetic process	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_7754012_3	1123248.KB893359_gene2085	1.556e-202	632.0	COG1082@1|root,COG1082@2|Bacteria,4NFSP@976|Bacteroidetes,1IW7J@117747|Sphingobacteriia	976|Bacteroidetes	G	Xylose isomerase-like TIM barrel	-	-	-	-	-	-	-	-	-	-	-	-	AP_endonuc_2
BYD3_k127_7754012_2	1123248.KB893359_gene2084	1.172e-224	699.0	COG0673@1|root,COG0673@2|Bacteria,4NG5E@976|Bacteroidetes,1IUTT@117747|Sphingobacteriia	976|Bacteroidetes	S	Oxidoreductase family, C-terminal alpha/beta domain	-	-	-	-	-	-	-	-	-	-	-	-	GFO_IDH_MocA,GFO_IDH_MocA_C
BYD3_k127_7754012_5	1237149.C900_00838	3.862e-115	389.0	COG0577@1|root,COG0577@2|Bacteria,4NDUK@976|Bacteroidetes,47U5S@768503|Cytophagia	976|Bacteroidetes	V	MacB-like periplasmic core domain	-	-	-	ko:K02004	-	M00258	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	FtsX,MacB_PCD
BYD3_k127_7759326_2	1237149.C900_03442	4.79e-117	398.0	COG4704@1|root,COG4704@2|Bacteria,4NGPF@976|Bacteroidetes,47KXU@768503|Cytophagia	976|Bacteroidetes	S	Bacterial Ig-like domain	-	-	-	-	-	-	-	-	-	-	-	-	Big_5,fn3_3
BYD3_k127_7759326_3	1121011.AUCB01000026_gene2905	8.678e-77	269.0	COG2227@1|root,COG2227@2|Bacteria,4NGVF@976|Bacteroidetes,1HXGK@117743|Flavobacteriia,23H1Q@178469|Arenibacter	976|Bacteroidetes	H	Methyltransferase domain	-	-	-	-	-	-	-	-	-	-	-	-	Methyltransf_23
BYD3_k127_7759326_0	1124780.ANNU01000015_gene1981	1.244e-312	966.0	COG0445@1|root,COG0445@2|Bacteria,4NFNH@976|Bacteroidetes,47JCG@768503|Cytophagia	976|Bacteroidetes	D	NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34	gidA	GO:0000166,GO:0001510,GO:0002097,GO:0002098,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0048037,GO:0050660,GO:0050662,GO:0071704,GO:0090304,GO:0097159,GO:1901265,GO:1901360,GO:1901363	-	ko:K03495	-	-	R08701	RC00053,RC00209,RC00870	ko00000,ko03016,ko03036	-	-	-	GIDA,GIDA_assoc
BYD3_k127_7759326_5	760192.Halhy_2528	2.47e-38	147.0	COG0319@1|root,COG0319@2|Bacteria,4NS93@976|Bacteroidetes,1ISZQ@117747|Sphingobacteriia	976|Bacteroidetes	S	Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA	ybeY	-	-	-	-	-	-	-	-	-	-	-	UPF0054
BYD3_k127_7759326_4	1237149.C900_03438	8.826e-66	226.0	COG2172@1|root,COG2172@2|Bacteria,4NRAA@976|Bacteroidetes,47QUX@768503|Cytophagia	976|Bacteroidetes	T	PFAM Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase	rsbW	-	2.7.11.1	ko:K04757	-	-	-	-	ko00000,ko01000,ko01001,ko03021	-	-	-	HATPase_c_2
BYD3_k127_7759326_1	1237149.C900_03437	1.541e-166	544.0	COG1196@1|root,COG1196@2|Bacteria,4NF7P@976|Bacteroidetes,47NNE@768503|Cytophagia	976|Bacteroidetes	D	nuclear chromosome segregation	-	-	-	-	-	-	-	-	-	-	-	-	DUF4175
BYD3_k127_7794352_0	929556.Solca_1727	4.975e-267	837.0	COG0841@1|root,COG0841@2|Bacteria,4NDZG@976|Bacteroidetes,1IQYT@117747|Sphingobacteriia	976|Bacteroidetes	V	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family	-	-	-	-	-	-	-	-	-	-	-	-	ACR_tran
BYD3_k127_7794352_2	1237149.C900_01635	1.06e-98	329.0	COG1408@1|root,COG1408@2|Bacteria,4NFCH@976|Bacteroidetes,47KGU@768503|Cytophagia	976|Bacteroidetes	S	Calcineurin-like phosphoesterase superfamily domain	-	-	-	ko:K07098	-	-	-	-	ko00000	-	-	-	Metallophos
BYD3_k127_7794352_3	1237149.C900_01635	4.256e-72	244.0	COG1408@1|root,COG1408@2|Bacteria,4NFCH@976|Bacteroidetes,47KGU@768503|Cytophagia	976|Bacteroidetes	S	Calcineurin-like phosphoesterase superfamily domain	-	-	-	ko:K07098	-	-	-	-	ko00000	-	-	-	Metallophos
BYD3_k127_7794352_1	1150600.ADIARSV_1327	1.096e-159	518.0	COG1070@1|root,COG1070@2|Bacteria,4NFBG@976|Bacteroidetes,1IPCF@117747|Sphingobacteriia	976|Bacteroidetes	G	Belongs to the FGGY kinase family	-	-	2.7.1.12	ko:K00851	ko00030,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map01100,map01110,map01120,map01130,map01200	-	R01737	RC00002,RC00017	ko00000,ko00001,ko01000	-	-	-	FGGY_C,FGGY_N
BYD3_k127_7794352_4	1189612.A33Q_4532	1.839e-36	142.0	COG2259@1|root,COG2259@2|Bacteria,4NP94@976|Bacteroidetes,47QI2@768503|Cytophagia	976|Bacteroidetes	S	DoxX	-	-	-	-	-	-	-	-	-	-	-	-	DoxX
BYD3_k127_7815261_4	313606.M23134_04900	2.098e-128	415.0	COG0155@1|root,COG0155@2|Bacteria,4NENW@976|Bacteroidetes,47MYH@768503|Cytophagia	976|Bacteroidetes	C	Nitrite and sulphite reductase 4Fe-4S	sir	-	1.8.1.2,1.8.7.1	ko:K00381,ko:K00392	ko00920,ko01100,ko01120,map00920,map01100,map01120	M00176	R00858,R00859,R03600	RC00065	ko00000,ko00001,ko00002,ko01000	-	-	-	HEPN,NIR_SIR,NIR_SIR_ferr
BYD3_k127_7815261_13	1121904.ARBP01000002_gene6953	3.195e-37	144.0	2DMMQ@1|root,32SHK@2|Bacteria,4NSZY@976|Bacteroidetes,47R9F@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	DUF3052
BYD3_k127_7815261_11	1313301.AUGC01000001_gene1771	3.678e-60	213.0	2CC29@1|root,32RUM@2|Bacteria,4NS83@976|Bacteroidetes	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	LPP20
BYD3_k127_7815261_16	880073.Calab_3759	6.242e-22	103.0	2DMDZ@1|root,32QUA@2|Bacteria,2NRD6@2323|unclassified Bacteria	2|Bacteria	S	LPP20 lipoprotein	-	-	-	-	-	-	-	-	-	-	-	-	LPP20
BYD3_k127_7815261_17	880073.Calab_3759	4.866e-13	72.0	2DMDZ@1|root,32QUA@2|Bacteria,2NRD6@2323|unclassified Bacteria	2|Bacteria	S	LPP20 lipoprotein	-	-	-	-	-	-	-	-	-	-	-	-	LPP20
BYD3_k127_7815261_15	1313301.AUGC01000001_gene1794	5.03e-22	104.0	2DMDZ@1|root,32QUA@2|Bacteria,4NSIY@976|Bacteroidetes	976|Bacteroidetes	S	LPP20 lipoprotein	-	-	-	-	-	-	-	-	-	-	-	-	LPP20
BYD3_k127_7815261_14	1237149.C900_02495	8.493e-33	133.0	COG2032@1|root,COG2032@2|Bacteria,4NX0Y@976|Bacteroidetes,47SBX@768503|Cytophagia	976|Bacteroidetes	P	superoxide dismutase activity	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_7815261_3	1123057.P872_19260	1.126e-130	420.0	COG0479@1|root,COG0479@2|Bacteria,4NFR3@976|Bacteroidetes,47KHR@768503|Cytophagia	976|Bacteroidetes	C	TIGRFAM succinate dehydrogenase and fumarate reductase iron-sulfur protein	frdB	-	1.3.5.1,1.3.5.4	ko:K00240	ko00020,ko00190,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00190,map00650,map00720,map01100,map01110,map01120,map01130,map01200	M00009,M00011,M00149,M00173,M00374,M00376	R02164	RC00045	ko00000,ko00001,ko00002,ko01000	-	-	-	Fer2_3,Fer4_7,Fer4_8
BYD3_k127_7815261_1	1239962.C943_01478	0.0	1089.0	COG1053@1|root,COG1053@2|Bacteria,4NFDU@976|Bacteroidetes,47JE5@768503|Cytophagia	976|Bacteroidetes	C	TIGRFAM succinate dehydrogenase or fumarate reductase, flavoprotein subunit	sdhA	-	1.3.5.1,1.3.5.4	ko:K00239	ko00020,ko00190,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko05134,map00020,map00190,map00650,map00720,map01100,map01110,map01120,map01130,map01200,map05134	M00009,M00011,M00149,M00173,M00374,M00376	R02164	RC00045	ko00000,ko00001,ko00002,ko01000	-	-	-	FAD_binding_2,Succ_DH_flav_C
BYD3_k127_7815261_9	1237149.C900_04401	1.35e-80	274.0	2CAZH@1|root,2Z7RU@2|Bacteria,4NGM5@976|Bacteroidetes,47NEV@768503|Cytophagia	976|Bacteroidetes	S	TIGRFAM succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family	sdhC	-	-	ko:K00241	ko00020,ko00190,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00190,map00650,map00720,map01100,map01110,map01120,map01130,map01200	M00009,M00011,M00149,M00173,M00374,M00376	R02164	RC00045	ko00000,ko00001,ko00002	-	-	-	-
BYD3_k127_7815261_0	1120965.AUBV01000008_gene1927	0.0	1418.0	COG0587@1|root,COG0587@2|Bacteria,4NFA0@976|Bacteroidetes,47K9H@768503|Cytophagia	976|Bacteroidetes	L	DNA-directed DNA polymerase	dnaE	-	2.7.7.7	ko:K02337	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	M00260	R00375,R00376,R00377,R00378	RC02795	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	-	-	-	DNA_pol3_alpha,HHH_6,PHP,RNase_T,tRNA_anti-codon
BYD3_k127_7815261_7	1237149.C900_03657	3.397e-108	357.0	COG0587@1|root,COG0587@2|Bacteria,4NFA0@976|Bacteroidetes,47K9H@768503|Cytophagia	976|Bacteroidetes	L	DNA-directed DNA polymerase	dnaE	-	2.7.7.7	ko:K02337	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	M00260	R00375,R00376,R00377,R00378	RC02795	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	-	-	-	DNA_pol3_alpha,HHH_6,PHP,RNase_T,tRNA_anti-codon
BYD3_k127_7815261_12	1237149.C900_03646	1.226e-55	195.0	COG3118@1|root,COG3118@2|Bacteria,4NQ5B@976|Bacteroidetes,47QDT@768503|Cytophagia	976|Bacteroidetes	O	Belongs to the thioredoxin family	trxA	-	-	ko:K03671	ko04621,ko05418,map04621,map05418	-	-	-	ko00000,ko00001,ko03110	-	-	-	Thioredoxin
BYD3_k127_7815261_10	929703.KE386491_gene3958	1.648e-60	214.0	COG0727@1|root,COG0727@2|Bacteria,4NJH9@976|Bacteroidetes,47QHT@768503|Cytophagia	976|Bacteroidetes	S	Putative zinc- or iron-chelating domain	-	-	-	ko:K06940	-	-	-	-	ko00000	-	-	-	CxxCxxCC
BYD3_k127_7815261_6	925409.KI911562_gene1861	1.357e-109	367.0	COG3503@1|root,COG3503@2|Bacteria,4NFAF@976|Bacteroidetes	976|Bacteroidetes	S	Protein of unknown function (DUF1624)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1624
BYD3_k127_7815261_8	1185876.BN8_02974	3.443e-102	341.0	COG2378@1|root,COG2378@2|Bacteria,4NHIC@976|Bacteroidetes,47K9W@768503|Cytophagia	976|Bacteroidetes	K	transcriptional regulator	-	-	-	-	-	-	-	-	-	-	-	-	HTH_11,WYL
BYD3_k127_7815261_2	925409.KI911562_gene2328	5.178e-163	531.0	28K2T@1|root,2Z9S3@2|Bacteria,4NJHU@976|Bacteroidetes	976|Bacteroidetes	S	SusD family	-	-	-	-	-	-	-	-	-	-	-	-	SusD_RagB
BYD3_k127_7815261_5	925409.KI911562_gene2329	4.694e-122	397.0	COG1629@1|root,COG4206@1|root,COG4206@2|Bacteria,COG4771@2|Bacteria,4NH06@976|Bacteroidetes,1IUVW@117747|Sphingobacteriia	976|Bacteroidetes	HP	CarboxypepD_reg-like domain	-	-	-	-	-	-	-	-	-	-	-	-	CarbopepD_reg_2,Plug,TonB_dep_Rec
BYD3_k127_7825123_6	525257.HMPREF0204_15104	6.371e-12	69.0	28PY0@1|root,2ZCHU@2|Bacteria,4NR5X@976|Bacteroidetes,1I9RF@117743|Flavobacteriia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_7825123_3	1166018.FAES_0184	1.11e-43	162.0	COG1359@1|root,COG1359@2|Bacteria,4NTAS@976|Bacteroidetes,47RZE@768503|Cytophagia	976|Bacteroidetes	S	Antibiotic biosynthesis monooxygenase	-	-	-	-	-	-	-	-	-	-	-	-	ABM,Amidohydro_2,CMD
BYD3_k127_7825123_1	1121898.Q766_13620	3.95e-83	285.0	COG0637@1|root,COG0637@2|Bacteria,4NEEH@976|Bacteroidetes,1IIV7@117743|Flavobacteriia	976|Bacteroidetes	S	Haloacid dehalogenase-like hydrolase	pgmB	-	-	-	-	-	-	-	-	-	-	-	HAD_2
BYD3_k127_7825123_7	1434325.AZQN01000003_gene2075	2.354e-05	48.0	2A7GX@1|root,30WEH@2|Bacteria,4P9UT@976|Bacteroidetes,47S3Y@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_7825123_4	264462.Bd0085	2.3e-35	142.0	COG0590@1|root,COG0590@2|Bacteria,1RHM4@1224|Proteobacteria,42SH2@68525|delta/epsilon subdivisions,2MUI0@213481|Bdellovibrionales,2WQ49@28221|Deltaproteobacteria	213481|Bdellovibrionales	FJ	deaminase	-	-	-	-	-	-	-	-	-	-	-	-	MafB19-deam,dCMP_cyt_deam_1
BYD3_k127_7825123_5	138119.DSY4983	4.236e-22	103.0	COG0782@1|root,COG0782@2|Bacteria,1V74M@1239|Firmicutes,24KMH@186801|Clostridia,2620N@186807|Peptococcaceae	186801|Clostridia	J	PFAM transcription elongation factor GreA GreB	-	-	-	ko:K06140	-	-	-	-	ko00000,ko03000	-	-	-	GreA_GreB,Rnk_N
BYD3_k127_7825123_0	909663.KI867150_gene970	1.954e-87	301.0	COG4191@1|root,COG4191@2|Bacteria,1R89N@1224|Proteobacteria,42QDX@68525|delta/epsilon subdivisions,2WKNA@28221|Deltaproteobacteria,2MR83@213462|Syntrophobacterales	28221|Deltaproteobacteria	T	His Kinase A (phosphoacceptor) domain	-	-	-	-	-	-	-	-	-	-	-	-	HATPase_c,HisKA,PAS
BYD3_k127_7825123_2	909663.KI867150_gene971	4.351e-49	181.0	COG2204@1|root,COG2204@2|Bacteria,1MU0N@1224|Proteobacteria,42M03@68525|delta/epsilon subdivisions,2X1VS@28221|Deltaproteobacteria,2MRES@213462|Syntrophobacterales	28221|Deltaproteobacteria	T	Bacterial regulatory protein, Fis family	-	-	-	-	-	-	-	-	-	-	-	-	HTH_8,Response_reg,Sigma54_activat
BYD3_k127_7825509_3	1237149.C900_05690	1.346e-66	229.0	COG1201@1|root,COG1201@2|Bacteria,4NGQ0@976|Bacteroidetes,47NAU@768503|Cytophagia	976|Bacteroidetes	L	DEAD DEAH box helicase	lhr	-	-	ko:K03724	-	-	-	-	ko00000,ko01000,ko03400	-	-	-	DEAD,DEAD_assoc,Helicase_C
BYD3_k127_7825509_1	1336803.PHEL49_2496	2.705e-79	296.0	COG1361@1|root,COG2373@1|root,COG3209@1|root,COG3291@1|root,COG4932@1|root,COG1361@2|Bacteria,COG2373@2|Bacteria,COG3209@2|Bacteria,COG3291@2|Bacteria,COG4932@2|Bacteria	2|Bacteria	M	domain protein	inlJ	-	-	ko:K20276	ko02024,map02024	-	-	-	ko00000,ko00001	-	-	-	CHU_C,DUF11,DUF5011,FctA,Gram_pos_anchor,MucBP,VWA_2
BYD3_k127_7825509_0	926549.KI421517_gene1035	1.495e-179	574.0	COG0306@1|root,COG0306@2|Bacteria,4NE7J@976|Bacteroidetes,47KEG@768503|Cytophagia	976|Bacteroidetes	P	phosphate transporter	-	-	-	ko:K03306	-	-	-	-	ko00000	2.A.20	-	-	PHO4
BYD3_k127_7825509_2	1237149.C900_05677	5.402e-78	266.0	COG1407@1|root,COG1407@2|Bacteria,4NMCE@976|Bacteroidetes,47QVG@768503|Cytophagia	976|Bacteroidetes	S	Calcineurin-like phosphoesterase	-	-	-	-	-	-	-	-	-	-	-	-	Metallophos
BYD3_k127_7825509_4	997884.HMPREF1068_03249	1.045e-58	209.0	COG2843@1|root,COG2843@2|Bacteria,4NGD2@976|Bacteroidetes,2FQ0M@200643|Bacteroidia,4AMPS@815|Bacteroidaceae	976|Bacteroidetes	M	Bacterial capsule synthesis protein	-	-	-	ko:K07282	-	-	-	-	ko00000	-	-	-	PGA_cap
BYD3_k127_7849831_0	1237149.C900_04990	7.908e-227	714.0	COG0072@1|root,COG0073@1|root,COG0072@2|Bacteria,COG0073@2|Bacteria,4NF5B@976|Bacteroidetes,47JAK@768503|Cytophagia	976|Bacteroidetes	J	Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily	pheT	GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006432,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009328,GO:0009987,GO:0010467,GO:0016070,GO:0019538,GO:0019752,GO:0032991,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:1901360,GO:1901564,GO:1901566,GO:1901576,GO:1902494	6.1.1.20	ko:K01890	ko00970,map00970	M00359,M00360	R03660	RC00055,RC00523	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	-	-	-	B3_4,B5,FDX-ACB,tRNA_bind
BYD3_k127_7849831_3	1305737.JAFX01000001_gene72	6.773e-50	184.0	COG3358@1|root,COG3358@2|Bacteria,4NNWJ@976|Bacteroidetes,47Q5N@768503|Cytophagia	976|Bacteroidetes	S	Protein of unknown function (DUF1684)	-	-	-	ko:K09164	-	-	-	-	ko00000	-	-	-	DUF1684
BYD3_k127_7849831_1	760192.Halhy_0905	3.976e-99	338.0	COG1680@1|root,COG1680@2|Bacteria,4NFUI@976|Bacteroidetes,1INWP@117747|Sphingobacteriia	976|Bacteroidetes	V	COGs COG1680 Beta-lactamase class C and other penicillin binding protein	-	-	3.5.2.6	ko:K01467	ko01501,ko02020,map01501,map02020	M00628	R06363	RC01499	ko00000,ko00001,ko00002,ko01000	-	-	-	Beta-lactamase
BYD3_k127_7849831_2	929562.Emtol_2898	3.904e-75	257.0	COG2003@1|root,COG2003@2|Bacteria,4NFBF@976|Bacteroidetes,47KTY@768503|Cytophagia	976|Bacteroidetes	E	Belongs to the UPF0758 family	radC	-	-	ko:K03630	-	-	-	-	ko00000	-	-	-	RadC
BYD3_k127_7861690_2	1046627.BZARG_1026	1.998e-07	56.0	2EEIB@1|root,338C7@2|Bacteria,4NVC8@976|Bacteroidetes,1I54E@117743|Flavobacteriia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_7861690_0	485918.Cpin_2127	2.445e-137	445.0	COG2114@1|root,COG2114@2|Bacteria,4NKWT@976|Bacteroidetes,1IV7B@117747|Sphingobacteriia	976|Bacteroidetes	T	Protein of unknown function (DUF2652)	-	-	-	-	-	-	-	-	-	-	-	-	DUF2652
BYD3_k127_7861690_1	1122603.ATVI01000006_gene360	5.373e-24	108.0	COG3652@1|root,COG3652@2|Bacteria	2|Bacteria	S	Domain of unknown function (DUF4142)	-	-	-	ko:K08995	-	-	-	-	ko00000	-	-	-	DUF4142
BYD3_k127_7880769_3	926556.Echvi_1024	0.0003048	51.0	COG4912@1|root,COG4912@2|Bacteria,4NMNG@976|Bacteroidetes,47R1Q@768503|Cytophagia	976|Bacteroidetes	L	DNA alkylation repair enzyme	alkD	-	-	-	-	-	-	-	-	-	-	-	DNA_alkylation
BYD3_k127_7880769_2	1121373.KB903620_gene2064	5.234e-42	159.0	COG1873@1|root,COG1873@2|Bacteria,4PKPS@976|Bacteroidetes,47XYE@768503|Cytophagia	976|Bacteroidetes	S	PRC-barrel domain	-	-	-	-	-	-	-	-	-	-	-	-	PRC
BYD3_k127_7880769_1	714943.Mucpa_6984	1.964e-53	191.0	2C5VR@1|root,32CJG@2|Bacteria,4NQV8@976|Bacteroidetes,1ITMX@117747|Sphingobacteriia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_7880769_0	1086011.HJ01_00868	0.0	1048.0	COG3345@1|root,COG3345@2|Bacteria,4NHAT@976|Bacteroidetes,1I8DT@117743|Flavobacteriia,2NUNI@237|Flavobacterium	976|Bacteroidetes	G	Glycosyl hydrolase family 36 N-terminal domain	-	-	3.2.1.22	ko:K07407	ko00052,ko00561,ko00600,ko00603,map00052,map00561,map00600,map00603	-	R01101,R01103,R01104,R01194,R01329,R02926,R03634,R04019,R04470,R05549,R05961,R06091	RC00049,RC00059,RC00451	ko00000,ko00001,ko01000	-	-	-	Glyco_hydro_36C,Glyco_hydro_36N,Melibiase
BYD3_k127_789159_5	1237149.C900_03692	4.639e-41	154.0	COG0034@1|root,COG0034@2|Bacteria,4NFSM@976|Bacteroidetes,47JRN@768503|Cytophagia	976|Bacteroidetes	F	PFAM Glutamine amidotransferase, class-II	purF	-	2.4.2.14	ko:K00764	ko00230,ko00250,ko01100,ko01110,ko01130,map00230,map00250,map01100,map01110,map01130	M00048	R01072	RC00010,RC02724,RC02752	ko00000,ko00001,ko00002,ko01000,ko01002	-	-	-	GATase_6,GATase_7
BYD3_k127_789159_1	1237149.C900_03691	5.162e-121	405.0	COG1007@1|root,COG1007@2|Bacteria,4NF94@976|Bacteroidetes,47JHI@768503|Cytophagia	976|Bacteroidetes	C	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient	-	-	1.6.5.3	ko:K00343	ko00190,ko01100,map00190,map01100	M00144	R11945	RC00061	ko00000,ko00001,ko00002,ko01000	3.D.1	-	-	Proton_antipo_M
BYD3_k127_789159_2	880071.Fleli_1808	6.191e-119	400.0	COG1008@1|root,COG1008@2|Bacteria,4NEJ1@976|Bacteroidetes,47MKB@768503|Cytophagia	976|Bacteroidetes	C	TIGRFAM proton-translocating NADH-quinone oxidoreductase, chain M	-	-	1.6.5.3	ko:K00342	ko00190,ko01100,map00190,map01100	M00144	R11945	RC00061	ko00000,ko00001,ko00002,ko01000	3.D.1	-	-	Oxidored_q5_N,Proton_antipo_M
BYD3_k127_789159_0	1237149.C900_03689	8.647e-155	510.0	COG1009@1|root,COG1009@2|Bacteria,4NEBM@976|Bacteroidetes,47M8Q@768503|Cytophagia	976|Bacteroidetes	CP	NADH ubiquinone oxidoreductase subunit 5 (Chain L) multisubunit Na H antiporter, MnhA subunit	-	-	1.6.5.3	ko:K00341	ko00190,ko01100,map00190,map01100	M00144	R11945	RC00061	ko00000,ko00001,ko00002,ko01000	3.D.1	-	-	Proton_antipo_M,Proton_antipo_N
BYD3_k127_789159_7	1121904.ARBP01000015_gene223	7.778e-26	111.0	COG0713@1|root,COG0713@2|Bacteria,4NSR8@976|Bacteroidetes,47R5R@768503|Cytophagia	976|Bacteroidetes	C	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient	nuoK	-	1.6.5.3	ko:K00340	ko00190,ko01100,map00190,map01100	M00144	R11945	RC00061	ko00000,ko00001,ko00002,ko01000	3.D.1	-	-	Oxidored_q2
BYD3_k127_789159_6	1237149.C900_03687	2.789e-34	138.0	COG0839@1|root,COG0839@2|Bacteria,4NNMC@976|Bacteroidetes,47PS1@768503|Cytophagia	976|Bacteroidetes	C	PFAM NADH-ubiquinone plastoquinone oxidoreductase chain 6	nuoJ	-	1.6.5.3	ko:K00339	ko00190,ko01100,map00190,map01100	M00144	R11945	RC00061	ko00000,ko00001,ko00002,ko01000	3.D.1	-	-	Oxidored_q3
BYD3_k127_789159_4	1237149.C900_03686	2.25e-76	263.0	COG1143@1|root,COG1143@2|Bacteria,4NGWR@976|Bacteroidetes,47MDD@768503|Cytophagia	976|Bacteroidetes	C	4Fe-4S ferredoxin iron-sulfur binding domain protein	ndhI	-	1.6.5.3	ko:K00338	ko00190,ko01100,map00190,map01100	M00144	R11945	RC00061	ko00000,ko00001,ko00002,ko01000	3.D.1	-	-	Fer4,Fer4_7
BYD3_k127_789159_3	1237149.C900_03685	1.464e-108	362.0	COG5002@1|root,COG5002@2|Bacteria,4PKMH@976|Bacteroidetes,47XWJ@768503|Cytophagia	976|Bacteroidetes	T	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase	-	-	-	-	-	-	-	-	-	-	-	-	HATPase_c,HisKA,HisKA_7TM,PAS_4,PAS_9,TPR_12
BYD3_k127_7903758_3	929562.Emtol_3322	2.401e-19	101.0	28I8D@1|root,2ZBHJ@2|Bacteria,4NHI9@976|Bacteroidetes,47KUP@768503|Cytophagia	976|Bacteroidetes	S	Domain of unknown function (DUF4249)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4249
BYD3_k127_7903758_0	926549.KI421517_gene2060	3.716e-215	698.0	COG1629@1|root,COG4771@2|Bacteria,4NF4B@976|Bacteroidetes,47JN3@768503|Cytophagia	976|Bacteroidetes	P	TonB-dependent Receptor Plug	-	-	-	-	-	-	-	-	-	-	-	-	CarbopepD_reg_2,Plug,TonB_dep_Rec
BYD3_k127_7903758_2	240292.Ava_C0039	8.392e-39	148.0	COG0399@1|root,COG0399@2|Bacteria,1GDTU@1117|Cyanobacteria,1HSKF@1161|Nostocales	1117|Cyanobacteria	J	23S rRNA-intervening sequence protein	-	-	-	-	-	-	-	-	-	-	-	-	23S_rRNA_IVP
BYD3_k127_7903758_1	616991.JPOO01000003_gene2653	1.637e-130	424.0	COG1621@1|root,COG1621@2|Bacteria,4PNKI@976|Bacteroidetes	976|Bacteroidetes	G	beta-fructofuranosidase activity	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_7903758_4	1123248.KB893325_gene1149	2.315e-17	85.0	COG0412@1|root,COG0412@2|Bacteria,4NIXW@976|Bacteroidetes,1IXE7@117747|Sphingobacteriia	976|Bacteroidetes	Q	COG COG1073 Hydrolases of the alpha beta superfamily	-	-	-	-	-	-	-	-	-	-	-	-	Abhydrolase_7,Pec_lyase,Peptidase_S9
BYD3_k127_7911992_2	929562.Emtol_1647	9.926e-122	400.0	COG0179@1|root,COG0179@2|Bacteria,4NFMZ@976|Bacteroidetes,47N4F@768503|Cytophagia	976|Bacteroidetes	Q	PFAM fumarylacetoacetate (FAA) hydrolase	-	-	-	-	-	-	-	-	-	-	-	-	FAA_hydrolase
BYD3_k127_7911992_6	269798.CHU_2068	1.278e-68	237.0	COG4572@1|root,COG4572@2|Bacteria,4PM1W@976|Bacteroidetes,47XZW@768503|Cytophagia	976|Bacteroidetes	S	Cation transport regulator	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_7911992_5	743722.Sph21_3791	1.006e-69	246.0	COG0697@1|root,COG0697@2|Bacteria,4NGJR@976|Bacteroidetes,1ISX8@117747|Sphingobacteriia	976|Bacteroidetes	EG	metabolite transporter	-	-	-	-	-	-	-	-	-	-	-	-	EamA
BYD3_k127_7911992_10	929556.Solca_2555	9.769e-42	166.0	COG0454@1|root,COG0456@2|Bacteria,4NHRI@976|Bacteroidetes,1IXS2@117747|Sphingobacteriia	976|Bacteroidetes	K	Acetyltransferase (GNAT) domain	-	-	-	-	-	-	-	-	-	-	-	-	Acetyltransf_1
BYD3_k127_7911992_11	1453505.JASY01000010_gene3918	1.595e-38	157.0	COG0454@1|root,COG0456@2|Bacteria,4NP1E@976|Bacteroidetes,1I26T@117743|Flavobacteriia,2NW1A@237|Flavobacterium	976|Bacteroidetes	K	Acetyltransferase (GNAT) domain	-	-	2.3.1.57	ko:K22441	-	-	-	-	ko00000,ko01000	-	-	-	Acetyltransf_1
BYD3_k127_7911992_12	485918.Cpin_2467	3.986e-31	128.0	COG2318@1|root,COG2318@2|Bacteria,4NU20@976|Bacteroidetes	976|Bacteroidetes	S	DinB family	-	-	-	-	-	-	-	-	-	-	-	-	DinB_2
BYD3_k127_7911992_4	929556.Solca_0606	3.189e-72	248.0	COG2808@1|root,COG2808@2|Bacteria,4NINW@976|Bacteroidetes,1IYCA@117747|Sphingobacteriia	976|Bacteroidetes	K	Putative FMN-binding domain	paiB	-	-	ko:K07734	-	-	-	-	ko00000,ko03000	-	-	-	FMN_bind_2
BYD3_k127_7911992_0	536232.CLM_0291	5.022e-156	506.0	COG0076@1|root,COG0076@2|Bacteria,1TSK0@1239|Firmicutes,24A90@186801|Clostridia,36MN9@31979|Clostridiaceae	186801|Clostridia	E	Pyridoxal-dependent decarboxylase conserved domain	-	-	4.1.1.15	ko:K01580	ko00250,ko00410,ko00430,ko00650,ko01100,ko01110,ko01120,ko02024,ko04727,ko04940,map00250,map00410,map00430,map00650,map01100,map01110,map01120,map02024,map04727,map04940	M00027	R00261,R00489,R01682,R02466	RC00299	ko00000,ko00001,ko00002,ko01000	-	-	-	Pyridoxal_deC
BYD3_k127_7911992_1	700598.Niako_5818	7.519e-133	432.0	COG0115@1|root,COG0115@2|Bacteria,4NEJY@976|Bacteroidetes,1IP2X@117747|Sphingobacteriia	976|Bacteroidetes	EH	Branched-chain amino acid aminotransferase	ilvE	-	2.6.1.42	ko:K00826	ko00270,ko00280,ko00290,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00270,map00280,map00290,map00770,map01100,map01110,map01130,map01210,map01230	M00019,M00036,M00119,M00570	R01090,R01214,R02199,R10991	RC00006,RC00036	ko00000,ko00001,ko00002,ko01000,ko01007	-	-	-	Aminotran_4
BYD3_k127_7911992_3	1519464.HY22_00050	4.729e-101	340.0	COG0604@1|root,COG0604@2|Bacteria	2|Bacteria	C	NADPH:quinone reductase activity	-	-	-	-	-	-	-	-	-	-	-	-	ADH_N,ADH_zinc_N
BYD3_k127_7911992_9	1123508.JH636447_gene7979	6.698e-43	161.0	COG3153@1|root,COG3153@2|Bacteria,2IZSX@203682|Planctomycetes	203682|Planctomycetes	S	Acetyltransferase (GNAT) domain	-	-	-	-	-	-	-	-	-	-	-	-	Acetyltransf_10
BYD3_k127_7911992_7	1174528.JH992898_gene2447	1.303e-64	227.0	COG3467@1|root,COG3467@2|Bacteria,1G4RC@1117|Cyanobacteria,1JJWX@1189|Stigonemataceae	1117|Cyanobacteria	S	Pyridoxamine 5'-phosphate oxidase	-	-	-	ko:K07005	-	-	-	-	ko00000	-	-	-	Pyridox_ox_2
BYD3_k127_7911992_13	485918.Cpin_6952	2.08e-27	117.0	COG2318@1|root,COG2318@2|Bacteria,4NPSF@976|Bacteroidetes	976|Bacteroidetes	S	Pfam DinB family	-	-	-	-	-	-	-	-	-	-	-	-	DinB
BYD3_k127_7911992_8	1511.CLOST_1626	3.184e-50	181.0	COG0346@1|root,COG0346@2|Bacteria,1V4NM@1239|Firmicutes,24HFS@186801|Clostridia,25U2S@186804|Peptostreptococcaceae	186801|Clostridia	E	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily	-	-	4.4.1.5	ko:K01759	ko00620,map00620	-	R02530	RC00004,RC00740	ko00000,ko00001,ko01000	-	-	-	Glyoxalase,Glyoxalase_4
BYD3_k127_7924328_7	1123037.AUDE01000006_gene1154	2.82e-17	84.0	2E50X@1|root,32ZUB@2|Bacteria,4NW9R@976|Bacteroidetes,1I57F@117743|Flavobacteriia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_7924328_0	1124780.ANNU01000038_gene172	5.505e-240	764.0	COG0489@1|root,COG3206@1|root,COG0489@2|Bacteria,COG3206@2|Bacteria,4NEXU@976|Bacteroidetes,47JQC@768503|Cytophagia	976|Bacteroidetes	DM	TIGRFAM capsular exopolysaccharide family	-	-	-	-	-	-	-	-	-	-	-	-	AAA_31,CbiA,GNVR,Wzz
BYD3_k127_7924328_5	1237149.C900_03507	1.325e-40	151.0	COG1544@1|root,COG1544@2|Bacteria,4NUME@976|Bacteroidetes,47RC7@768503|Cytophagia	976|Bacteroidetes	J	PFAM Sigma 54 modulation protein S30EA ribosomal protein	raiA	-	-	ko:K05808	-	-	-	-	ko00000,ko03009	-	-	-	Ribosomal_S30AE
BYD3_k127_7924328_4	1237149.C900_03508	4.933e-111	367.0	COG4974@1|root,COG4974@2|Bacteria,4NGQW@976|Bacteroidetes,47JJY@768503|Cytophagia	976|Bacteroidetes	L	Belongs to the 'phage' integrase family	xerC	-	-	ko:K03733	-	-	-	-	ko00000,ko03036	-	-	-	Phage_int_SAM_1,Phage_integrase
BYD3_k127_7924328_6	1089547.KB913013_gene540	4.834e-22	96.0	COG0828@1|root,COG0828@2|Bacteria,4NUPV@976|Bacteroidetes,47RU4@768503|Cytophagia	976|Bacteroidetes	J	Belongs to the bacterial ribosomal protein bS21 family	rpsU	-	-	ko:K02970	ko03010,map03010	M00178	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_S21
BYD3_k127_7924328_2	1237149.C900_03511	9.545e-195	612.0	COG1960@1|root,COG1960@2|Bacteria,4NEHA@976|Bacteroidetes,47K4J@768503|Cytophagia	976|Bacteroidetes	I	acyl-CoA dehydrogenase	acdA	-	-	-	-	-	-	-	-	-	-	-	Acyl-CoA_dh_1,Acyl-CoA_dh_M,Acyl-CoA_dh_N
BYD3_k127_7924328_1	1124780.ANNU01000005_gene2370	7.467e-222	693.0	COG1004@1|root,COG1004@2|Bacteria,4NE00@976|Bacteroidetes,47KAG@768503|Cytophagia	976|Bacteroidetes	M	Belongs to the UDP-glucose GDP-mannose dehydrogenase family	tuaD	-	1.1.1.22	ko:K00012	ko00040,ko00053,ko00520,ko01100,map00040,map00053,map00520,map01100	M00014,M00129,M00361,M00362	R00286	RC00291	ko00000,ko00001,ko00002,ko01000	-	-	-	UDPG_MGDP_dh,UDPG_MGDP_dh_C,UDPG_MGDP_dh_N
BYD3_k127_7924328_3	929562.Emtol_1005	2.016e-185	582.0	COG0451@1|root,COG0451@2|Bacteria,4NEZX@976|Bacteroidetes,47JU8@768503|Cytophagia	976|Bacteroidetes	GM	PFAM NAD dependent epimerase dehydratase family	-	-	4.1.1.35,4.2.1.46	ko:K01710,ko:K08678	ko00520,ko00521,ko00523,ko00525,ko01055,ko01100,ko01130,map00520,map00521,map00523,map00525,map01055,map01100,map01130	M00361,M00793	R01384,R06513	RC00402,RC00508	ko00000,ko00001,ko00002,ko01000	-	-	-	GDP_Man_Dehyd
BYD3_k127_7945941_1	1121373.KB903665_gene3045	8.487e-77	260.0	COG0568@1|root,COG0568@2|Bacteria,4NEBF@976|Bacteroidetes,47JZ7@768503|Cytophagia	976|Bacteroidetes	K	Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released	rpoD	-	-	ko:K03086	-	-	-	-	ko00000,ko03021	-	-	-	Sigma70_r1_2,Sigma70_r2,Sigma70_r3,Sigma70_r4
BYD3_k127_7945941_5	929704.Myrod_3156	3.56e-23	100.0	COG1278@1|root,COG1278@2|Bacteria,4NURE@976|Bacteroidetes,1I50Z@117743|Flavobacteriia,47IIQ@76831|Myroides	976|Bacteroidetes	K	Cold shock protein domain	-	-	-	ko:K03704	-	-	-	-	ko00000,ko03000	-	-	-	CSD
BYD3_k127_7945941_4	1158345.JNLL01000001_gene737	5.902e-30	124.0	COG5502@1|root,COG5502@2|Bacteria,2G586@200783|Aquificae	200783|Aquificae	S	Uncharacterized conserved protein (DUF2267)	-	-	-	-	-	-	-	-	-	-	-	-	DUF2267
BYD3_k127_7945941_0	1048983.EL17_17160	1.261e-102	345.0	COG0517@1|root,COG1994@1|root,COG0517@2|Bacteria,COG1994@2|Bacteria,4NK8R@976|Bacteroidetes,47NFI@768503|Cytophagia	976|Bacteroidetes	S	Peptidase family M50	-	-	-	-	-	-	-	-	-	-	-	-	CBS,Peptidase_M50
BYD3_k127_7945941_2	1124780.ANNU01000030_gene1181	1.395e-52	194.0	COG0398@1|root,COG0398@2|Bacteria,4NFIC@976|Bacteroidetes,47PGM@768503|Cytophagia	976|Bacteroidetes	S	SNARE associated Golgi protein	-	-	-	-	-	-	-	-	-	-	-	-	SNARE_assoc
BYD3_k127_7945941_3	1237149.C900_03829	1.103e-32	139.0	COG0589@1|root,COG0589@2|Bacteria	2|Bacteria	T	AMP binding	uspA	-	-	-	-	-	-	-	-	-	-	-	DUF2007,Usp
BYD3_k127_7945941_6	866536.Belba_2664	2.489e-15	79.0	COG2353@1|root,COG2353@2|Bacteria,4NQKY@976|Bacteroidetes,47RR5@768503|Cytophagia	976|Bacteroidetes	S	Belongs to the UPF0312 family	-	-	-	-	-	-	-	-	-	-	-	-	YceI
BYD3_k127_7946838_1	1185876.BN8_06695	5.157e-130	423.0	COG3239@1|root,COG3239@2|Bacteria,4NHPQ@976|Bacteroidetes,47KXE@768503|Cytophagia	976|Bacteroidetes	I	Fatty acid desaturase	-	-	-	-	-	-	-	-	-	-	-	-	FA_desaturase
BYD3_k127_7946838_3	755732.Fluta_3082	1.672e-45	168.0	COG1917@1|root,COG1917@2|Bacteria,4NSB6@976|Bacteroidetes,1I4FM@117743|Flavobacteriia	976|Bacteroidetes	S	Cupin domain protein	-	-	-	-	-	-	-	-	-	-	-	-	Cupin_2
BYD3_k127_7946838_2	760192.Halhy_5684	1.483e-93	310.0	COG2207@1|root,COG2207@2|Bacteria,4NM5G@976|Bacteroidetes,1ISDK@117747|Sphingobacteriia	976|Bacteroidetes	K	PFAM Bacterial regulatory helix-turn-helix proteins, AraC family	-	-	-	-	-	-	-	-	-	-	-	-	HTH_18
BYD3_k127_7946838_5	1121899.Q764_12175	7.611e-06	51.0	COG3237@1|root,COG3237@2|Bacteria,4NUMZ@976|Bacteroidetes,1I57R@117743|Flavobacteriia,2NXG5@237|Flavobacterium	976|Bacteroidetes	S	Belongs to the UPF0337 (CsbD) family	-	-	-	-	-	-	-	-	-	-	-	-	CsbD
BYD3_k127_7946838_4	1168034.FH5T_15540	4.05e-08	56.0	2DFUX@1|root,2ZT8Y@2|Bacteria,4P92B@976|Bacteroidetes	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_7946838_0	323097.Nham_2980	1.519e-210	664.0	COG5361@1|root,COG5361@2|Bacteria,1NX2A@1224|Proteobacteria,2TTBA@28211|Alphaproteobacteria,3JX1U@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Protein of unknown function (DUF1214)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1214,DUF1254
BYD3_k127_795181_4	700598.Niako_4637	3.149e-05	46.0	2CYFR@1|root,32T44@2|Bacteria,4P6IN@976|Bacteroidetes,1IZDY@117747|Sphingobacteriia	976|Bacteroidetes	S	Protein of unknown function (DUF998)	-	-	-	-	-	-	-	-	-	-	-	-	DUF998
BYD3_k127_795181_2	880071.Fleli_1917	8.425e-67	241.0	COG4421@1|root,COG4421@2|Bacteria,4NVD4@976|Bacteroidetes,47R51@768503|Cytophagia	976|Bacteroidetes	G	Protein of unknown function (DUF563)	-	-	-	-	-	-	-	-	-	-	-	-	DUF563
BYD3_k127_795181_3	700598.Niako_4637	3.725e-08	57.0	2CYFR@1|root,32T44@2|Bacteria,4P6IN@976|Bacteroidetes,1IZDY@117747|Sphingobacteriia	976|Bacteroidetes	S	Protein of unknown function (DUF998)	-	-	-	-	-	-	-	-	-	-	-	-	DUF998
BYD3_k127_795181_0	118161.KB235922_gene2360	6.113e-98	338.0	COG1680@1|root,COG1680@2|Bacteria,1G5M7@1117|Cyanobacteria	1117|Cyanobacteria	V	Beta-lactamase class C	-	-	-	-	-	-	-	-	-	-	-	-	Beta-lactamase,DUF3471
BYD3_k127_795181_1	192952.MM_2650	2e-71	252.0	COG0596@1|root,arCOG01648@2157|Archaea,2Y06J@28890|Euryarchaeota,2N9YM@224756|Methanomicrobia	224756|Methanomicrobia	E	PFAM alpha beta hydrolase fold	-	-	-	-	-	-	-	-	-	-	-	-	Abhydrolase_1,Abhydrolase_4
BYD3_k127_7955562_19	760192.Halhy_2377	1.615e-43	164.0	COG1228@1|root,COG1228@2|Bacteria,4NHGA@976|Bacteroidetes,1IWA0@117747|Sphingobacteriia	976|Bacteroidetes	Q	Amidohydrolase family	-	-	-	-	-	-	-	-	-	-	-	-	Amidohydro_1
BYD3_k127_7955562_3	1237149.C900_01585	2.393e-212	667.0	COG1228@1|root,COG1228@2|Bacteria,4NF27@976|Bacteroidetes,47JC0@768503|Cytophagia	976|Bacteroidetes	Q	PFAM amidohydrolase	-	-	-	-	-	-	-	-	-	-	-	-	Amidohydro_1,Amidohydro_3
BYD3_k127_7955562_4	1237149.C900_01584	1.05e-181	580.0	COG1228@1|root,COG1228@2|Bacteria,4NE5U@976|Bacteroidetes,47M6X@768503|Cytophagia	976|Bacteroidetes	Q	PFAM Amidohydrolase family	-	-	-	-	-	-	-	-	-	-	-	-	Amidohydro_1
BYD3_k127_7955562_14	1237149.C900_00768	1.494e-74	258.0	COG3279@1|root,COG3279@2|Bacteria,4NNUY@976|Bacteroidetes	976|Bacteroidetes	K	COGs COG3279 Response regulator of the LytR AlgR family	-	-	-	-	-	-	-	-	-	-	-	-	LytTR,Response_reg
BYD3_k127_7955562_11	1237149.C900_00769	2.428e-110	366.0	COG2972@1|root,COG2972@2|Bacteria,4NMUF@976|Bacteroidetes	976|Bacteroidetes	T	Histidine kinase	-	-	-	-	-	-	-	-	-	-	-	-	His_kinase
BYD3_k127_7955562_20	880070.Cycma_0052	3.671e-41	156.0	29E7I@1|root,3015I@2|Bacteria,4NNFG@976|Bacteroidetes,47T83@768503|Cytophagia	976|Bacteroidetes	S	Protein of unknown function (DUF1761)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1761
BYD3_k127_7955562_10	1123057.P872_11575	9.407e-114	373.0	COG2321@1|root,COG2321@2|Bacteria,4NDTZ@976|Bacteroidetes,47KPT@768503|Cytophagia	976|Bacteroidetes	S	Putative neutral zinc metallopeptidase	ypfJ	-	-	ko:K07054	-	-	-	-	ko00000	-	-	-	Zn_peptidase
BYD3_k127_7955562_16	1237149.C900_03977	4.326e-59	209.0	COG0838@1|root,COG0838@2|Bacteria,4NQET@976|Bacteroidetes,47PRF@768503|Cytophagia	976|Bacteroidetes	C	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient	nuoA	-	1.6.5.3	ko:K00330	ko00190,ko01100,map00190,map01100	M00144	R11945	RC00061	ko00000,ko00001,ko00002,ko01000	3.D.1	-	-	Oxidored_q4
BYD3_k127_7955562_13	1237149.C900_03978	2.319e-101	331.0	COG0377@1|root,COG0377@2|Bacteria,4NHZ2@976|Bacteroidetes,47J9U@768503|Cytophagia	976|Bacteroidetes	C	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient	nuoB	-	1.6.5.3	ko:K00331	ko00190,ko01100,map00190,map01100	M00144	R11945	RC00061	ko00000,ko00001,ko00002,ko01000	3.D.1	-	-	Oxidored_q6
BYD3_k127_7955562_17	1237149.C900_03981	5.909e-58	205.0	COG0852@1|root,COG0852@2|Bacteria,4NPGA@976|Bacteroidetes,47PNZ@768503|Cytophagia	976|Bacteroidetes	C	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient	nuoC	-	1.6.5.3	ko:K00332	ko00190,ko01100,map00190,map01100	M00144	R11945	RC00061	ko00000,ko00001,ko00002,ko01000	3.D.1	-	-	Complex1_30kDa
BYD3_k127_7955562_1	1237149.C900_03982	1.659e-221	691.0	COG0649@1|root,COG0649@2|Bacteria,4NF02@976|Bacteroidetes,47JZW@768503|Cytophagia	976|Bacteroidetes	C	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient	nuoD	-	1.6.5.3	ko:K00333	ko00190,ko01100,map00190,map01100	M00144	R11945	RC00061	ko00000,ko00001,ko00002,ko01000	3.D.1	-	-	Complex1_49kDa
BYD3_k127_7955562_6	1237149.C900_03983	1.796e-157	511.0	COG0062@1|root,COG0063@1|root,COG0062@2|Bacteria,COG0063@2|Bacteria,4NG2F@976|Bacteroidetes,47JYX@768503|Cytophagia	976|Bacteroidetes	G	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration	nnrD	-	4.2.1.136,5.1.99.6	ko:K17758,ko:K17759	-	-	-	-	ko00000,ko01000	-	-	-	Carb_kinase,YjeF_N
BYD3_k127_7955562_8	635013.TherJR_2416	1.433e-125	411.0	COG2008@1|root,COG2008@2|Bacteria,1TPZI@1239|Firmicutes,248TR@186801|Clostridia,2621Y@186807|Peptococcaceae	186801|Clostridia	E	PFAM Beta-eliminating lyase	ltaE	-	4.1.2.48	ko:K01620	ko00260,ko01100,ko01110,ko01120,ko01130,ko01230,map00260,map01100,map01110,map01120,map01130,map01230	-	R00751,R06171	RC00312,RC00372	ko00000,ko00001,ko01000	-	-	-	Beta_elim_lyase
BYD3_k127_7955562_22	1406840.Q763_02140	1.766e-29	128.0	COG0589@1|root,COG0589@2|Bacteria,4NHXF@976|Bacteroidetes,1HY7W@117743|Flavobacteriia,2P08F@237|Flavobacterium	976|Bacteroidetes	T	Belongs to the universal stress protein A family	-	-	-	-	-	-	-	-	-	-	-	-	Usp
BYD3_k127_7955562_0	1239962.C943_02715	1.911e-222	698.0	COG0017@1|root,COG0017@2|Bacteria,4NDY4@976|Bacteroidetes,47JG8@768503|Cytophagia	976|Bacteroidetes	J	Asparaginyl-tRNA synthetase	asnS	-	6.1.1.22	ko:K01893	ko00970,map00970	M00359,M00360	R03648	RC00055,RC00523	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	-	-	-	tRNA-synt_2,tRNA_anti-codon
BYD3_k127_7955562_2	1237149.C900_03991	6.816e-220	691.0	COG1508@1|root,COG1508@2|Bacteria,4NE5B@976|Bacteroidetes,47KC2@768503|Cytophagia	976|Bacteroidetes	K	RNA polymerase, sigma-54 factor	rpoN	-	-	ko:K03092	ko02020,ko05111,map02020,map05111	-	-	-	ko00000,ko00001,ko03021	-	-	-	Sigma54_AID,Sigma54_CBD,Sigma54_DBD
BYD3_k127_7955562_23	866536.Belba_1916	7.85e-28	121.0	COG0671@1|root,COG0671@2|Bacteria,4NUPJ@976|Bacteroidetes,47PT7@768503|Cytophagia	976|Bacteroidetes	I	phosphoesterase, PA-phosphatase related	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_7955562_9	1237149.C900_03993	3.759e-122	396.0	COG1024@1|root,COG1024@2|Bacteria,4NHRF@976|Bacteroidetes,47JJ9@768503|Cytophagia	976|Bacteroidetes	I	enoyl-CoA hydratase isomerase family	-	-	5.3.3.18	ko:K15866	ko00360,ko01120,map00360,map01120	-	R09837,R09839	RC00004,RC00326,RC02689,RC03003	ko00000,ko00001,ko01000	-	-	-	ECH_1
BYD3_k127_7955562_25	1120968.AUBX01000011_gene3352	6.321e-09	63.0	2F8R9@1|root,3413H@2|Bacteria,4P4N0@976|Bacteroidetes	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_7955562_18	1121895.Q765_06635	1.044e-54	196.0	COG2128@1|root,COG2128@2|Bacteria,4NQI7@976|Bacteroidetes,1I92V@117743|Flavobacteriia,2P07D@237|Flavobacterium	976|Bacteroidetes	O	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity	-	-	-	-	-	-	-	-	-	-	-	-	CMD
BYD3_k127_7955562_15	485918.Cpin_2178	4.698e-68	236.0	COG0664@1|root,COG0664@2|Bacteria,4NNIZ@976|Bacteroidetes,1ISM0@117747|Sphingobacteriia	976|Bacteroidetes	T	- catabolite gene activator and regulatory subunit of cAMP-dependent protein	-	-	-	-	-	-	-	-	-	-	-	-	cNMP_binding
BYD3_k127_7955562_5	1237149.C900_04785	2.235e-175	557.0	COG2204@1|root,COG2204@2|Bacteria,4NE89@976|Bacteroidetes,47JKI@768503|Cytophagia	976|Bacteroidetes	T	CheY-like receiver AAA-type ATPase and DNA-binding domains	ntrX	-	-	-	-	-	-	-	-	-	-	-	HTH_8,Response_reg,Sigma54_activat
BYD3_k127_7955562_21	1237149.C900_04104	6.321e-35	137.0	2E6VI@1|root,331F4@2|Bacteria,4NWUI@976|Bacteroidetes,47T84@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_7955562_12	313606.M23134_00725	2.025e-105	349.0	COG5544@1|root,COG5544@2|Bacteria,4NGNB@976|Bacteroidetes,47JQY@768503|Cytophagia	976|Bacteroidetes	S	Predicted periplasmic lipoprotein (DUF2279)	-	-	-	-	-	-	-	-	-	-	-	-	DUF2279
BYD3_k127_7955562_7	1237149.C900_04102	1.506e-137	447.0	COG2911@1|root,COG2911@2|Bacteria,4NF7F@976|Bacteroidetes,47KQP@768503|Cytophagia	976|Bacteroidetes	S	PFAM Family of	-	-	-	-	-	-	-	-	-	-	-	-	TamB
BYD3_k127_7981076_2	1380384.JADN01000004_gene2134	2.607e-66	234.0	2DKFZ@1|root,309D6@2|Bacteria,4NEGR@976|Bacteroidetes,1HZN8@117743|Flavobacteriia	976|Bacteroidetes	S	Domain of unknown function (DUF4382)	-	-	-	-	-	-	-	-	-	-	-	-	CarboxypepD_reg,DUF4382
BYD3_k127_7981076_0	1121012.AUKX01000004_gene3551	1.026e-138	450.0	COG1680@1|root,COG1680@2|Bacteria,4NGZR@976|Bacteroidetes,1HXEI@117743|Flavobacteriia,23H58@178469|Arenibacter	976|Bacteroidetes	V	Beta-lactamase	-	-	-	-	-	-	-	-	-	-	-	-	Beta-lactamase
BYD3_k127_7993947_3	1123248.KB893370_gene5011	1.02e-128	415.0	COG4299@1|root,COG4299@2|Bacteria,4NGKU@976|Bacteroidetes,1IQII@117747|Sphingobacteriia	976|Bacteroidetes	S	COGs COG4299 conserved	-	-	-	-	-	-	-	-	-	-	-	-	DUF5009
BYD3_k127_7993947_0	1121011.AUCB01000005_gene2381	2.663e-297	950.0	COG1413@1|root,COG1413@2|Bacteria,4NEZ7@976|Bacteroidetes,1I7P3@117743|Flavobacteriia,23FQE@178469|Arenibacter	976|Bacteroidetes	C	Domain of Unknown Function (DUF1080)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1080,HEAT_2
BYD3_k127_7993947_2	760192.Halhy_5414	6.793e-254	785.0	COG0673@1|root,COG0673@2|Bacteria,4NGHJ@976|Bacteroidetes,1IRE0@117747|Sphingobacteriia	976|Bacteroidetes	S	Oxidoreductase	-	-	-	-	-	-	-	-	-	-	-	-	GFO_IDH_MocA,GFO_IDH_MocA_C
BYD3_k127_7993947_1	760192.Halhy_5136	1.843e-295	917.0	COG2133@1|root,COG3241@1|root,COG2133@2|Bacteria,COG3241@2|Bacteria,4NEMM@976|Bacteroidetes,1IUR8@117747|Sphingobacteriia	976|Bacteroidetes	CG	Copper binding proteins, plastocyanin/azurin family	-	-	-	-	-	-	-	-	-	-	-	-	Copper-bind
BYD3_k127_7997715_0	1123276.KB893245_gene1455	7.545e-98	350.0	COG0577@1|root,COG0577@2|Bacteria,4NDUK@976|Bacteroidetes,47NTJ@768503|Cytophagia	976|Bacteroidetes	V	MacB-like periplasmic core domain	-	-	-	ko:K02004	-	M00258	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	FtsX,MacB_PCD
BYD3_k127_7997715_2	760192.Halhy_2177	5.529e-23	105.0	COG0577@1|root,COG0577@2|Bacteria,4NDUK@976|Bacteroidetes,1IWSI@117747|Sphingobacteriia	976|Bacteroidetes	V	MacB-like periplasmic core domain	-	-	-	ko:K02004	-	M00258	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	FtsX,MacB_PCD
BYD3_k127_7997715_1	929556.Solca_0266	9.676e-89	322.0	COG0577@1|root,COG0577@2|Bacteria,4NDUK@976|Bacteroidetes,1IW4Z@117747|Sphingobacteriia	976|Bacteroidetes	V	MacB-like periplasmic core domain	-	-	-	ko:K02004	-	M00258	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	FtsX,MacB_PCD
BYD3_k127_8013748_10	1237149.C900_01773	5.606e-26	109.0	28MPU@1|root,2ZAYW@2|Bacteria,4NRQD@976|Bacteroidetes,47NJK@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_8013748_9	1237149.C900_01773	9.356e-48	174.0	28MPU@1|root,2ZAYW@2|Bacteria,4NRQD@976|Bacteroidetes,47NJK@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_8013748_6	1237149.C900_04701	5.943e-83	282.0	COG0810@1|root,COG0810@2|Bacteria,4NMG7@976|Bacteroidetes,47KAX@768503|Cytophagia	976|Bacteroidetes	U	Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins	-	-	-	ko:K03832	-	-	-	-	ko00000,ko02000	2.C.1.1	-	-	TonB_C
BYD3_k127_8013748_2	1124780.ANNU01000005_gene2393	1.686e-142	464.0	COG2059@1|root,COG2059@2|Bacteria,4NNZ1@976|Bacteroidetes,47JQS@768503|Cytophagia	976|Bacteroidetes	P	TIGRFAM chromate transporter, chromate ion transporter (CHR) family	-	-	-	ko:K07240	-	-	-	-	ko00000,ko02000	2.A.51.1	-	-	Chromate_transp
BYD3_k127_8013748_1	1239962.C943_03104	1.318e-159	507.0	COG3491@1|root,COG3491@2|Bacteria,4NED5@976|Bacteroidetes,47JDX@768503|Cytophagia	976|Bacteroidetes	C	Belongs to the iron ascorbate-dependent oxidoreductase family	-	-	-	-	-	-	-	-	-	-	-	-	2OG-FeII_Oxy,DIOX_N
BYD3_k127_8013748_3	485917.Phep_0814	5.118e-97	322.0	COG0605@1|root,COG0605@2|Bacteria,4NK61@976|Bacteroidetes,1IRYF@117747|Sphingobacteriia	976|Bacteroidetes	C	Destroys radicals which are normally produced within the cells and which are toxic to biological systems	-	-	1.15.1.1	ko:K04564	ko04013,ko04068,ko04146,ko04211,ko04212,ko04213,ko05016,map04013,map04068,map04146,map04211,map04212,map04213,map05016	-	-	-	ko00000,ko00001,ko01000	-	-	-	Sod_Fe_C,Sod_Fe_N
BYD3_k127_8013748_7	1237149.C900_01035	1.064e-63	225.0	COG1381@1|root,COG1381@2|Bacteria,4NIBQ@976|Bacteroidetes,47K9Z@768503|Cytophagia	976|Bacteroidetes	L	Involved in DNA repair and RecF pathway recombination	recO	-	-	ko:K03584	ko03440,map03440	-	-	-	ko00000,ko00001,ko03400	-	-	-	RecO_C,RecO_N
BYD3_k127_8013748_0	1237149.C900_01034	1.25e-167	553.0	COG3292@1|root,COG3292@2|Bacteria,4NDWE@976|Bacteroidetes,47M4V@768503|Cytophagia	976|Bacteroidetes	T	Two component regulator propeller	-	-	-	-	-	-	-	-	-	-	-	-	Reg_prop
BYD3_k127_8013748_5	1237149.C900_01033	4.562e-86	288.0	COG1435@1|root,COG1435@2|Bacteria,4NE5R@976|Bacteroidetes,47JA6@768503|Cytophagia	976|Bacteroidetes	F	thymidine kinase	tdk	GO:0003674,GO:0003824,GO:0004797,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006213,GO:0006259,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009120,GO:0009123,GO:0009124,GO:0009157,GO:0009162,GO:0009165,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0018130,GO:0019136,GO:0019205,GO:0019206,GO:0019438,GO:0019637,GO:0034641,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046104,GO:0046125,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0090304,GO:0090407,GO:1901135,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901576,GO:1901657	2.7.1.21	ko:K00857	ko00240,ko00983,ko01100,map00240,map00983,map01100	-	R01567,R02099,R08233	RC00002,RC00017	ko00000,ko00001,ko01000	-	-	-	TK
BYD3_k127_8013748_8	1237149.C900_01031	4.154e-57	212.0	COG3827@1|root,COG3827@2|Bacteria,4PMMQ@976|Bacteroidetes,47Y53@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_8013748_4	1237149.C900_01030	1.032e-96	318.0	COG0772@1|root,COG0772@2|Bacteria,4NDZD@976|Bacteroidetes,47JVQ@768503|Cytophagia	976|Bacteroidetes	D	Belongs to the SEDS family	rodA	-	-	ko:K05837	-	-	-	-	ko00000,ko03036	-	-	-	FTSW_RODA_SPOVE
BYD3_k127_8032290_3	468059.AUHA01000002_gene140	2.407e-59	209.0	COG2003@1|root,COG2003@2|Bacteria,4NRCM@976|Bacteroidetes,1ISFA@117747|Sphingobacteriia	976|Bacteroidetes	L	DNA repair	-	-	-	ko:K03630	-	-	-	-	ko00000	-	-	-	RadC
BYD3_k127_8032290_0	761193.Runsl_4932	0.0	1234.0	COG4946@1|root,COG4946@2|Bacteria,4NJFC@976|Bacteroidetes,47JWA@768503|Cytophagia	976|Bacteroidetes	M	Tricorn protease homolog	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_8032290_5	694427.Palpr_0068	1.815e-12	71.0	COG5520@1|root,COG5520@2|Bacteria,4NEG7@976|Bacteroidetes,2FMDC@200643|Bacteroidia,22WKT@171551|Porphyromonadaceae	976|Bacteroidetes	M	O-Glycosyl hydrolase family 30	-	-	-	-	-	-	-	-	-	-	-	-	Glyco_hydr_30_2,Glyco_hydro_30C
BYD3_k127_8032290_1	314278.NB231_13636	4.703e-181	584.0	2DUQG@1|root,33RR5@2|Bacteria	2|Bacteria	S	HCO3- transporter family	-	-	-	-	-	-	-	-	-	-	-	-	HCO3_cotransp
BYD3_k127_8032290_4	926550.CLDAP_21140	1.219e-38	150.0	COG1595@1|root,COG1595@2|Bacteria	2|Bacteria	K	DNA-templated transcription, initiation	sigE1	-	-	ko:K03088	-	-	-	-	ko00000,ko03021	-	-	-	Sigma70_r2,Sigma70_r4,Sigma70_r4_2
BYD3_k127_8032290_2	1237149.C900_01724	1.321e-92	315.0	COG0457@1|root,COG0457@2|Bacteria,4NF7U@976|Bacteroidetes,47MJ6@768503|Cytophagia	976|Bacteroidetes	S	Tetratricopeptide repeat protein	-	-	-	-	-	-	-	-	-	-	-	-	TPR_8
BYD3_k127_8049331_3	1237149.C900_04409	7.323e-50	183.0	COG2802@1|root,COG2802@2|Bacteria,4NEJU@976|Bacteroidetes	976|Bacteroidetes	S	Peptidase S16, lon domain protein	-	-	3.4.21.53	ko:K01338,ko:K07157	ko04112,map04112	-	-	-	ko00000,ko00001,ko01000,ko01002	-	-	-	LON_substr_bdg
BYD3_k127_8049331_2	1358423.N180_20785	1.863e-55	199.0	COG0503@1|root,COG0503@2|Bacteria,4NP7K@976|Bacteroidetes,1IS3F@117747|Sphingobacteriia	976|Bacteroidetes	F	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis	apt	-	2.4.2.7	ko:K00759	ko00230,ko01100,map00230,map01100	-	R00190,R01229,R04378	RC00063	ko00000,ko00001,ko01000,ko04147	-	-	-	Pribosyltran
BYD3_k127_8049331_4	1288963.ADIS_0972	2.387e-38	148.0	COG1765@1|root,COG1765@2|Bacteria,4NNTY@976|Bacteroidetes,47R4T@768503|Cytophagia	976|Bacteroidetes	O	OsmC-like protein	-	-	-	ko:K07397	-	-	-	-	ko00000	-	-	-	OsmC
BYD3_k127_8049331_0	1237149.C900_04413	3.426e-174	554.0	COG1228@1|root,COG1228@2|Bacteria,4NE6C@976|Bacteroidetes,47K5F@768503|Cytophagia	976|Bacteroidetes	Q	PFAM Amidohydrolase family	hutI	-	3.5.2.7	ko:K01468	ko00340,ko01100,map00340,map01100	M00045	R02288	RC00683	ko00000,ko00001,ko00002,ko01000	-	-	-	Amidohydro_1,Amidohydro_3
BYD3_k127_8062534_10	504472.Slin_6146	3.27e-93	308.0	COG3000@1|root,COG3000@2|Bacteria,4NISR@976|Bacteroidetes,47MCR@768503|Cytophagia	976|Bacteroidetes	I	PFAM Fatty acid hydroxylase	-	-	-	-	-	-	-	-	-	-	-	-	FA_hydroxylase
BYD3_k127_8062534_7	1239962.C943_00656	4.163e-147	499.0	COG1629@1|root,COG1629@2|Bacteria,4NMTD@976|Bacteroidetes,47PTS@768503|Cytophagia	976|Bacteroidetes	P	CarboxypepD_reg-like domain	-	-	-	-	-	-	-	-	-	-	-	-	CarbopepD_reg_2,Plug
BYD3_k127_8062534_18	313606.M23134_06156	5.87e-06	57.0	28M3Z@1|root,32ZEY@2|Bacteria,4NUZS@976|Bacteroidetes,47SGM@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_8062534_13	313606.M23134_07954	7.164e-59	231.0	COG3291@1|root,COG3386@1|root,COG3291@2|Bacteria,COG3386@2|Bacteria,4NDZQ@976|Bacteroidetes,47MGN@768503|Cytophagia	976|Bacteroidetes	M	C-terminal domain of CHU protein family	-	-	-	-	-	-	-	-	-	-	-	-	CHU_C,PKD
BYD3_k127_8062534_15	1192034.CAP_2122	3.531e-29	136.0	COG1520@1|root,COG2863@1|root,COG1520@2|Bacteria,COG2863@2|Bacteria,1P31B@1224|Proteobacteria,42VDF@68525|delta/epsilon subdivisions,2WRBJ@28221|Deltaproteobacteria	28221|Deltaproteobacteria	C	amine dehydrogenase activity	-	-	-	-	-	-	-	-	-	-	-	-	SBBP,fn3
BYD3_k127_8062534_5	1121904.ARBP01000011_gene1450	1.708e-159	509.0	COG1741@1|root,COG1741@2|Bacteria,4NFZD@976|Bacteroidetes,47NGE@768503|Cytophagia	976|Bacteroidetes	S	Pirin C-terminal cupin domain	-	-	-	ko:K06911	-	-	-	-	ko00000	-	-	-	Pirin,Pirin_C
BYD3_k127_8062534_6	880070.Cycma_0384	4.828e-152	488.0	COG4409@1|root,COG4409@2|Bacteria,4PKIP@976|Bacteroidetes,47YCP@768503|Cytophagia	976|Bacteroidetes	G	BNR repeat-like domain	-	-	-	-	-	-	-	-	-	-	-	-	BNR_2
BYD3_k127_8062534_8	1122621.ATZA01000005_gene580	4.449e-145	473.0	COG0823@1|root,COG0823@2|Bacteria,4NFRP@976|Bacteroidetes,1IPPY@117747|Sphingobacteriia	976|Bacteroidetes	U	Protein of unknown function (DUF3748)	-	-	-	-	-	-	-	-	-	-	-	-	DUF3748,PD40
BYD3_k127_8062534_0	471854.Dfer_3985	8.409e-233	730.0	COG0591@1|root,COG0591@2|Bacteria,4NEN8@976|Bacteroidetes,47KPI@768503|Cytophagia	976|Bacteroidetes	E	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family	-	-	-	ko:K03307	-	-	-	-	ko00000	2.A.21	-	-	SSF
BYD3_k127_8062534_4	641524.ADICYQ_5025	1.927e-176	561.0	COG0738@1|root,COG0738@2|Bacteria,4NEB2@976|Bacteroidetes,47KY1@768503|Cytophagia	976|Bacteroidetes	G	PFAM Major Facilitator Superfamily	-	-	-	-	-	-	-	-	-	-	-	-	MFS_1
BYD3_k127_8062534_12	1123278.KB893455_gene769	4.392e-61	221.0	COG4977@1|root,COG4977@2|Bacteria,4PKXD@976|Bacteroidetes,47Y72@768503|Cytophagia	976|Bacteroidetes	K	AraC-like ligand binding domain	-	-	-	-	-	-	-	-	-	-	-	-	AraC_binding,HTH_AraC
BYD3_k127_8062534_11	497964.CfE428DRAFT_3517	7.842e-62	225.0	COG0329@1|root,COG0329@2|Bacteria,46UHJ@74201|Verrucomicrobia	74201|Verrucomicrobia	EM	Dihydrodipicolinate synthetase family	-	-	4.1.3.3	ko:K01639	ko00520,map00520	-	R01811	RC00159,RC00600	ko00000,ko00001,ko01000	-	-	-	DHDPS
BYD3_k127_8062534_3	1123248.KB893385_gene4914	2.347e-189	597.0	COG1609@1|root,COG4977@1|root,COG1609@2|Bacteria,COG4977@2|Bacteria,4NGPU@976|Bacteroidetes,1IW5B@117747|Sphingobacteriia	976|Bacteroidetes	K	Periplasmic binding proteins and sugar binding domain of LacI family	-	-	-	ko:K02529	-	-	-	-	ko00000,ko03000	-	-	-	HTH_18,Peripla_BP_3
BYD3_k127_8062534_14	694427.Palpr_2300	1.591e-29	122.0	COG2852@1|root,COG2852@2|Bacteria,4NUSE@976|Bacteroidetes,2FUH5@200643|Bacteroidia	976|Bacteroidetes	S	Protein of unknown function (DUF559)	-	-	-	-	-	-	-	-	-	-	-	-	DUF559
BYD3_k127_8062534_16	1268240.ATFI01000001_gene3764	1.899e-22	104.0	2A388@1|root,30RPW@2|Bacteria,4PDY8@976|Bacteroidetes,2FW2K@200643|Bacteroidia,4ASNB@815|Bacteroidaceae	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_8062534_1	1121904.ARBP01000060_gene1915	5.193e-207	649.0	COG0399@1|root,COG0399@2|Bacteria,4NE4B@976|Bacteroidetes,47M1Z@768503|Cytophagia	976|Bacteroidetes	E	DegT/DnrJ/EryC1/StrS aminotransferase family	-	-	-	-	-	-	-	-	-	-	-	-	DegT_DnrJ_EryC1
BYD3_k127_8062534_9	761193.Runsl_2768	3.352e-134	439.0	28KPG@1|root,2ZA7K@2|Bacteria,4NFWJ@976|Bacteroidetes,47MDA@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_8062534_2	1121904.ARBP01000018_gene2704	8.177e-191	604.0	COG4409@1|root,COG4409@2|Bacteria,4NIJX@976|Bacteroidetes,47MH2@768503|Cytophagia	976|Bacteroidetes	G	BNR repeat-like domain	-	-	-	-	-	-	-	-	-	-	-	-	BNR_2
BYD3_k127_8062534_17	504472.Slin_6604	5.841e-22	100.0	COG0584@1|root,COG0584@2|Bacteria,4NW6B@976|Bacteroidetes,47XAH@768503|Cytophagia	976|Bacteroidetes	C	Glycerophosphoryl diester phosphodiesterase family	-	-	3.1.4.46	ko:K01126	ko00564,map00564	-	R01030,R01470	RC00017,RC00425	ko00000,ko00001,ko01000	-	-	-	GDPD
BYD3_k127_8063589_2	760192.Halhy_4416	9.246e-51	185.0	COG2311@1|root,COG2311@2|Bacteria	2|Bacteria	S	Protein of unknown function (DUF418)	-	-	-	ko:K07148	-	-	-	-	ko00000	-	-	-	DUF418
BYD3_k127_8063589_1	163908.KB235896_gene2479	3.518e-130	441.0	COG3733@1|root,COG3733@2|Bacteria,1G2YB@1117|Cyanobacteria,1HMBG@1161|Nostocales	1117|Cyanobacteria	Q	PFAM Copper amine oxidase, N2 domain	-	-	1.4.3.21	ko:K00276	ko00260,ko00350,ko00360,ko00410,ko00950,ko00960,ko01100,ko01110,map00260,map00350,map00360,map00410,map00950,map00960,map01100,map01110	-	R02382,R02529,R02613,R03139,R04027,R04300,R06154,R06740	RC00062,RC00189,RC00676,RC01052	ko00000,ko00001,ko01000	-	-	-	Cu_amine_oxid,Cu_amine_oxidN2,Cu_amine_oxidN3
BYD3_k127_8063589_0	269798.CHU_1586	3.958e-175	557.0	COG0304@1|root,COG0304@2|Bacteria,4NDVU@976|Bacteroidetes,47K25@768503|Cytophagia	976|Bacteroidetes	I	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP	-	-	2.3.1.179	ko:K09458	ko00061,ko00780,ko01100,ko01212,map00061,map00780,map01100,map01212	M00083,M00572	R04355,R04726,R04952,R04957,R04960,R04963,R04968,R07762,R10115,R10119	RC00039,RC02728,RC02729,RC02888	ko00000,ko00001,ko00002,ko01000,ko01004	-	-	-	Ketoacyl-synt_C,ketoacyl-synt
BYD3_k127_8063589_3	714943.Mucpa_4137	5.283e-21	98.0	COG1309@1|root,COG1309@2|Bacteria,4NNK5@976|Bacteroidetes,1ISU5@117747|Sphingobacteriia	976|Bacteroidetes	K	Regulatory protein tetr	-	-	-	-	-	-	-	-	-	-	-	-	TetR_C_13,TetR_N
BYD3_k127_8080197_2	1123278.KB893422_gene1620	1.942e-118	385.0	COG1231@1|root,COG1231@2|Bacteria,4PMAQ@976|Bacteroidetes,47N7X@768503|Cytophagia	976|Bacteroidetes	E	Protein of unknown function (DUF1593)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1593
BYD3_k127_8080197_0	1121904.ARBP01000015_gene179	3.386e-123	424.0	COG0577@1|root,COG0577@2|Bacteria,4NDUK@976|Bacteroidetes,47NTJ@768503|Cytophagia	976|Bacteroidetes	V	MacB-like periplasmic core domain	-	-	-	ko:K02004	-	M00258	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	FtsX,MacB_PCD
BYD3_k127_8080197_5	696747.NIES39_R01220	1.1e-06	61.0	COG0457@1|root,COG1196@1|root,COG0457@2|Bacteria,COG1196@2|Bacteria,1G1U5@1117|Cyanobacteria,1H8FU@1150|Oscillatoriales	1117|Cyanobacteria	L	Tetratricopeptide repeat	-	-	-	-	-	-	-	-	-	-	-	-	TPR_1,TPR_11,TPR_16,TPR_2,TPR_8
BYD3_k127_8080197_4	536227.CcarbDRAFT_2229	2.191e-08	66.0	COG0657@1|root,COG0657@2|Bacteria,1UFB9@1239|Firmicutes,24DFS@186801|Clostridia,36HTV@31979|Clostridiaceae	186801|Clostridia	I	Dienelactone hydrolase family	-	-	-	-	-	-	-	-	-	-	-	-	DLH
BYD3_k127_8080197_6	1227739.Hsw_3291	0.0003507	45.0	28I8D@1|root,2Z8B7@2|Bacteria,4NM23@976|Bacteroidetes,47NIB@768503|Cytophagia	976|Bacteroidetes	S	Domain of unknown function (DUF4249)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4249
BYD3_k127_8080197_1	109760.SPPG_04804T0	3.72e-122	402.0	COG1063@1|root,KOG0024@2759|Eukaryota,38I2Z@33154|Opisthokonta,3NXYU@4751|Fungi	4751|Fungi	Q	Dehydrogenase	-	-	-	-	-	-	-	-	-	-	-	-	ADH_N,ADH_zinc_N
BYD3_k127_8080197_3	929556.Solca_3818	2.032e-35	137.0	COG0457@1|root,COG2114@1|root,COG5616@1|root,COG0457@2|Bacteria,COG2114@2|Bacteria,COG5616@2|Bacteria,4NFW7@976|Bacteroidetes,1IR3J@117747|Sphingobacteriia	976|Bacteroidetes	K	Tetratricopeptide repeat	-	-	-	-	-	-	-	-	-	-	-	-	Guanylate_cyc,HTH_18,TPR_16,TPR_2,TPR_8
BYD3_k127_809904_6	1304284.L21TH_1164	8.932e-34	132.0	COG0058@1|root,COG0058@2|Bacteria,1TQAJ@1239|Firmicutes,248E1@186801|Clostridia,36E5W@31979|Clostridiaceae	186801|Clostridia	G	Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties	glgP2	-	2.4.1.1	ko:K00688	ko00500,ko01100,ko01110,ko02026,ko04217,ko04910,ko04922,ko04931,map00500,map01100,map01110,map02026,map04217,map04910,map04922,map04931	-	R02111	-	ko00000,ko00001,ko01000	-	GT35	-	DUF3417,Glyco_transf_5,Phosphorylase
BYD3_k127_809904_0	1185876.BN8_00704	8.465e-269	835.0	COG3507@1|root,COG3507@2|Bacteria,4NEVJ@976|Bacteroidetes,47JBZ@768503|Cytophagia	976|Bacteroidetes	G	Belongs to the glycosyl hydrolase 43 family	-	-	-	-	-	-	-	-	-	-	-	-	CBM9_1,CBM_6,Glyco_hydro_43
BYD3_k127_809904_1	1408473.JHXO01000005_gene1541	6.239e-226	709.0	COG3534@1|root,COG3534@2|Bacteria,4NHR5@976|Bacteroidetes,2G2XU@200643|Bacteroidia	976|Bacteroidetes	G	Alpha-L-arabinofuranosidase C-terminal domain	-	-	3.2.1.55	ko:K01209	ko00520,map00520	-	R01762	-	ko00000,ko00001,ko01000	-	GH51	-	Alpha-L-AF_C
BYD3_k127_809904_2	1185876.BN8_00711	3.15e-187	591.0	COG2382@1|root,COG2382@2|Bacteria,4NHSA@976|Bacteroidetes,47MHN@768503|Cytophagia	976|Bacteroidetes	P	Putative esterase	-	-	-	ko:K07214	-	-	-	-	ko00000	-	-	-	CBM_48,Esterase
BYD3_k127_809904_3	504472.Slin_1412	2.516e-135	434.0	COG2382@1|root,COG2382@2|Bacteria,4NFVV@976|Bacteroidetes,47JT1@768503|Cytophagia	976|Bacteroidetes	P	Carbohydrate-binding module 48 (Isoamylase N-terminal domain)	-	-	-	ko:K07214	-	-	-	-	ko00000	-	-	-	CBM_48,Esterase
BYD3_k127_809904_4	760192.Halhy_0496	7.976e-52	184.0	COG2382@1|root,COG2382@2|Bacteria,4NFVV@976|Bacteroidetes,1IXM3@117747|Sphingobacteriia	976|Bacteroidetes	P	PFAM Carbohydrate-binding module 48 (Isoamylase N-terminal domain)	-	-	-	ko:K07214	-	-	-	-	ko00000	-	-	-	CBM_48,Esterase
BYD3_k127_809904_7	1123277.KB893206_gene3420	2.171e-32	134.0	COG1595@1|root,COG1595@2|Bacteria,4NVCP@976|Bacteroidetes,47RQU@768503|Cytophagia	976|Bacteroidetes	K	Sigma-70, region 4	-	-	-	-	-	-	-	-	-	-	-	-	Sigma70_r2,Sigma70_r4_2
BYD3_k127_809904_5	1286632.P278_18210	2.585e-41	166.0	COG3712@1|root,COG3712@2|Bacteria,4NICU@976|Bacteroidetes,1HZXH@117743|Flavobacteriia	976|Bacteroidetes	PT	Domain of unknown function (DUF4974)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4974,FecR
BYD3_k127_8112053_3	929556.Solca_3751	5.449e-53	195.0	COG1597@1|root,COG1597@2|Bacteria,4NJWB@976|Bacteroidetes,1IQ8Q@117747|Sphingobacteriia	976|Bacteroidetes	I	Diacylglycerol kinase	-	-	-	-	-	-	-	-	-	-	-	-	DAGK_cat
BYD3_k127_8112053_1	204669.Acid345_4433	4.443e-142	460.0	COG0457@1|root,COG0457@2|Bacteria,3Y4T0@57723|Acidobacteria,2JNAK@204432|Acidobacteriia	204432|Acidobacteriia	S	Protein of unknown function (DUF2911)	-	-	-	-	-	-	-	-	-	-	-	-	DUF2911
BYD3_k127_8112053_2	388413.ALPR1_14294	2.234e-102	357.0	COG0457@1|root,COG0642@1|root,COG0457@2|Bacteria,COG2205@2|Bacteria,4NI29@976|Bacteroidetes,47KZN@768503|Cytophagia	976|Bacteroidetes	T	PFAM Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase	-	-	-	-	-	-	-	-	-	-	-	-	HATPase_c,TPR_10,TPR_12,TPR_7,TPR_8
BYD3_k127_8112053_0	1237149.C900_02054	0.0	1133.0	COG5549@1|root,COG5549@2|Bacteria,4NEA0@976|Bacteroidetes,47YDB@768503|Cytophagia	976|Bacteroidetes	O	Domain of unknown function (DUF5117)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4953,DUF5117,DUF5118
BYD3_k127_8112053_4	1305737.JAFX01000001_gene1249	3.163e-49	183.0	COG4772@1|root,COG4772@2|Bacteria,4PPHE@976|Bacteroidetes,47YN9@768503|Cytophagia	976|Bacteroidetes	P	Carboxypeptidase regulatory-like domain	-	-	-	-	-	-	-	-	-	-	-	-	CarbopepD_reg_2
BYD3_k127_8127887_4	1267535.KB906767_gene2167	9.124e-15	75.0	COG2080@1|root,COG2080@2|Bacteria,3Y5EJ@57723|Acidobacteria,2JN23@204432|Acidobacteriia	204432|Acidobacteriia	C	[2Fe-2S] binding domain	-	-	-	-	-	-	-	-	-	-	-	-	Fer2,Fer2_2
BYD3_k127_8127887_2	1121904.ARBP01000054_gene503	9.49e-57	203.0	2AYX9@1|root,31R2Z@2|Bacteria,4NNS4@976|Bacteroidetes,47RDY@768503|Cytophagia	976|Bacteroidetes	S	DinB superfamily	-	-	-	-	-	-	-	-	-	-	-	-	DinB_2
BYD3_k127_8127887_0	926549.KI421517_gene3452	1.918e-136	445.0	COG4850@1|root,COG4850@2|Bacteria,4NFZ6@976|Bacteroidetes,47K82@768503|Cytophagia	976|Bacteroidetes	S	Uncharacterized conserved protein (DUF2183)	-	-	-	-	-	-	-	-	-	-	-	-	DUF2183
BYD3_k127_8127887_1	1296416.JACB01000001_gene3301	1.512e-110	380.0	COG0457@1|root,COG2207@1|root,COG5616@1|root,COG0457@2|Bacteria,COG2207@2|Bacteria,COG5616@2|Bacteria,4NFW7@976|Bacteroidetes,1HZQR@117743|Flavobacteriia	976|Bacteroidetes	K	COGs COG5616 integral membrane protein	-	-	-	-	-	-	-	-	-	-	-	-	ANAPC3,Guanylate_cyc,HTH_18,TPR_8
BYD3_k127_8127887_3	1434325.AZQN01000004_gene1536	6.265e-27	115.0	COG1629@1|root,COG1629@2|Bacteria,4P4MW@976|Bacteroidetes,47JAS@768503|Cytophagia	976|Bacteroidetes	P	TonB-dependent receptor	-	-	-	-	-	-	-	-	-	-	-	-	CarbopepD_reg_2,CarboxypepD_reg,OMP_b-brl_3,Plug
BYD3_k127_8129967_4	760192.Halhy_4846	6.005e-10	64.0	COG1595@1|root,COG1595@2|Bacteria,4PIXB@976|Bacteroidetes,1IZ59@117747|Sphingobacteriia	976|Bacteroidetes	K	COGs COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog	-	-	-	ko:K03088	-	-	-	-	ko00000,ko03021	-	-	-	Sigma70_r2,Sigma70_r4_2
BYD3_k127_8129967_2	1124780.ANNU01000008_gene2664	2.559e-98	333.0	COG1609@1|root,COG1609@2|Bacteria,4NDW6@976|Bacteroidetes,47ME3@768503|Cytophagia	976|Bacteroidetes	K	PFAM Periplasmic binding protein LacI transcriptional regulator	-	-	-	ko:K02529,ko:K05499	-	-	-	-	ko00000,ko03000	-	-	-	LacI,Peripla_BP_1,Peripla_BP_3
BYD3_k127_8129967_0	925409.KI911562_gene1384	8.058e-216	677.0	COG1082@1|root,COG2152@1|root,COG1082@2|Bacteria,COG2152@2|Bacteria,4NGDZ@976|Bacteroidetes,1IQ4Y@117747|Sphingobacteriia	976|Bacteroidetes	G	Domain of Unknown Function (DUF1080)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1080
BYD3_k127_8129967_3	1237149.C900_01601	3.041e-53	194.0	COG1051@1|root,COG1051@2|Bacteria,4NNJ5@976|Bacteroidetes,47PUZ@768503|Cytophagia	976|Bacteroidetes	F	pfam nudix	-	-	-	-	-	-	-	-	-	-	-	-	NUDIX
BYD3_k127_8129967_1	866536.Belba_0374	9.003e-103	340.0	COG0009@1|root,COG0009@2|Bacteria,4NF5U@976|Bacteroidetes,47KX9@768503|Cytophagia	976|Bacteroidetes	J	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine	sua5	-	2.7.7.87	ko:K07566	-	-	R10463	RC00745	ko00000,ko01000,ko03009,ko03016	-	-	-	SUA5,Sua5_yciO_yrdC
BYD3_k127_8134522_2	586413.CCDL010000001_gene1218	2.277e-84	289.0	COG1680@1|root,COG1680@2|Bacteria,1V3KP@1239|Firmicutes,4IDK5@91061|Bacilli,23KW4@182709|Oceanobacillus	91061|Bacilli	V	Beta-lactamase	-	-	-	-	-	-	-	-	-	-	-	-	Beta-lactamase
BYD3_k127_8134522_10	1234364.AMSF01000037_gene207	1.235e-18	91.0	COG1846@1|root,COG1846@2|Bacteria,1NJH3@1224|Proteobacteria	1224|Proteobacteria	K	Regulatory protein MarR	-	-	-	-	-	-	-	-	-	-	-	-	HTH_27,MarR_2
BYD3_k127_8134522_8	700598.Niako_1061	8.251e-27	115.0	COG1917@1|root,COG1917@2|Bacteria,4NEZV@976|Bacteroidetes	976|Bacteroidetes	S	Cupin 2, conserved barrel	-	-	-	-	-	-	-	-	-	-	-	-	Cupin_2
BYD3_k127_8134522_5	296591.Bpro_1275	9.809e-60	207.0	COG4274@1|root,COG4274@2|Bacteria,1RKGA@1224|Proteobacteria	1224|Proteobacteria	S	GYD domain	-	-	-	-	-	-	-	-	-	-	-	-	GYD
BYD3_k127_8134522_6	296591.Bpro_1275	1.472e-51	187.0	COG4274@1|root,COG4274@2|Bacteria,1RKGA@1224|Proteobacteria	1224|Proteobacteria	S	GYD domain	-	-	-	-	-	-	-	-	-	-	-	-	GYD
BYD3_k127_8134522_9	1282362.AEAC466_19875	1.248e-26	117.0	2AKFV@1|root,31B7K@2|Bacteria,1Q6ZJ@1224|Proteobacteria,2USNP@28211|Alphaproteobacteria,2KIR0@204458|Caulobacterales	204458|Caulobacterales	S	Protein of unknown function (DUF998)	-	-	-	-	-	-	-	-	-	-	-	-	DUF998
BYD3_k127_8134522_4	760192.Halhy_6805	2.369e-77	276.0	COG2931@1|root,COG2931@2|Bacteria,4NTNT@976|Bacteroidetes,1ITUP@117747|Sphingobacteriia	976|Bacteroidetes	Q	SPTR Hemolysin-type calcium-binding region	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_8134522_3	471854.Dfer_1756	6.51e-79	286.0	COG1749@1|root,COG3386@1|root,COG1749@2|Bacteria,COG3386@2|Bacteria,4NTUT@976|Bacteroidetes	976|Bacteroidetes	N	Domain of unknown function (DUF4082)	-	-	-	-	-	-	-	-	-	-	-	-	Cu-binding_MopE,DUF4082
BYD3_k127_8134522_0	686340.Metal_2450	1.876e-143	487.0	COG0613@1|root,COG4409@1|root,COG0613@2|Bacteria,COG4409@2|Bacteria	2|Bacteria	G	exo-alpha-(2->6)-sialidase activity	nanA	GO:0001573,GO:0003674,GO:0003824,GO:0004308,GO:0004553,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005975,GO:0006629,GO:0006643,GO:0006664,GO:0006665,GO:0006672,GO:0006687,GO:0006689,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009311,GO:0009313,GO:0009987,GO:0016020,GO:0016042,GO:0016052,GO:0016787,GO:0016798,GO:0016997,GO:0019377,GO:0030149,GO:0034641,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043603,GO:0044237,GO:0044238,GO:0044242,GO:0044248,GO:0044255,GO:0044424,GO:0044464,GO:0046466,GO:0046479,GO:0046514,GO:0071704,GO:1901135,GO:1901136,GO:1901564,GO:1901565,GO:1901575,GO:1903509	3.2.1.18	ko:K01186	ko00511,ko00600,ko04142,map00511,map00600,map04142	-	R04018	RC00028,RC00077	ko00000,ko00001,ko01000,ko02042	-	GH33	-	BNR_2,CarboxypepD_reg,Gram_pos_anchor,Sialidase,YSIRK_signal
BYD3_k127_8134522_7	324602.Caur_1639	3.502e-43	182.0	COG5520@1|root,COG5520@2|Bacteria	2|Bacteria	M	Belongs to the glycosyl hydrolase 30 family	-	-	-	-	-	-	-	-	-	-	-	-	Glyco_hydr_30_2,Glyco_hydro_30C
BYD3_k127_8134522_1	1123248.KB893330_gene427	7.19e-125	403.0	2DUCG@1|root,33PYM@2|Bacteria	2|Bacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_8136332_2	991.IW20_12095	4.305e-44	164.0	COG3708@1|root,COG3708@2|Bacteria,4NQ46@976|Bacteroidetes,1I45F@117743|Flavobacteriia,2NW6B@237|Flavobacterium	976|Bacteroidetes	K	transcription activator, effector binding	-	-	-	ko:K13653	-	-	-	-	ko00000,ko03000	-	-	-	Cass2,GyrI-like
BYD3_k127_8136332_3	925409.KI911562_gene2231	2.458e-34	134.0	2FCGD@1|root,344JU@2|Bacteria,4P6KV@976|Bacteroidetes,1IZ55@117747|Sphingobacteriia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_8136332_4	1123277.KB893173_gene1755	3.256e-08	57.0	2BZQ6@1|root,339SI@2|Bacteria,4NXJG@976|Bacteroidetes,47SN2@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_8136332_0	1313301.AUGC01000001_gene1748	4.742e-76	261.0	COG0755@1|root,COG0755@2|Bacteria,4NFUS@976|Bacteroidetes	976|Bacteroidetes	O	PFAM Cytochrome c assembly protein	ccmC	-	-	ko:K02195	ko02010,map02010	M00259	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.107	-	-	Cytochrom_C_asm
BYD3_k127_8136332_1	1227739.Hsw_PA0002	2.156e-45	169.0	COG0726@1|root,COG0726@2|Bacteria,4NJK7@976|Bacteroidetes,47MUF@768503|Cytophagia	976|Bacteroidetes	G	Polysaccharide deacetylase	-	-	-	-	-	-	-	-	-	-	-	-	Polysacc_deac_1
BYD3_k127_8142793_0	1237149.C900_05507	0.0	1510.0	COG1061@1|root,COG1112@1|root,COG1061@2|Bacteria,COG1112@2|Bacteria,4NF2S@976|Bacteroidetes,47KY5@768503|Cytophagia	976|Bacteroidetes	L	Superfamily I DNA and RNA	-	-	-	-	-	-	-	-	-	-	-	-	AAA_11,AAA_12,DUF4011
BYD3_k127_8142793_7	1237149.C900_05506	1.157e-54	205.0	COG1555@1|root,COG1555@2|Bacteria,4NK4K@976|Bacteroidetes,47KXV@768503|Cytophagia	976|Bacteroidetes	L	Helix-hairpin-helix motif	comEA	-	-	-	-	-	-	-	-	-	-	-	HHH_3
BYD3_k127_8142793_2	1237149.C900_05504	2.213e-157	506.0	COG0373@1|root,COG0373@2|Bacteria,4NFTY@976|Bacteroidetes,47JF5@768503|Cytophagia	976|Bacteroidetes	H	Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA)	hemA	-	1.2.1.70	ko:K02492	ko00860,ko01100,ko01110,ko01120,map00860,map01100,map01110,map01120	M00121	R04109	RC00055,RC00149	ko00000,ko00001,ko00002,ko01000	-	-	-	GlutR_N,GlutR_dimer,Shikimate_DH
BYD3_k127_8142793_9	471854.Dfer_1197	4.564e-47	183.0	COG2207@1|root,COG2207@2|Bacteria,4NEEQ@976|Bacteroidetes,47RA1@768503|Cytophagia	976|Bacteroidetes	K	helix_turn_helix, arabinose operon control protein	pchR	-	-	-	-	-	-	-	-	-	-	-	HTH_18
BYD3_k127_8142793_4	926549.KI421517_gene1458	2.976e-88	300.0	COG2010@1|root,COG2010@2|Bacteria,4NHQV@976|Bacteroidetes,47PEN@768503|Cytophagia	976|Bacteroidetes	C	Cytochrome c	-	-	-	-	-	-	-	-	-	-	-	-	Cytochrom_C,Cytochrome_CBB3
BYD3_k127_8142793_10	1338011.BD94_3358	4.987e-47	174.0	COG1595@1|root,COG1595@2|Bacteria,4NETF@976|Bacteroidetes,1HXWP@117743|Flavobacteriia,34QDV@308865|Elizabethkingia	976|Bacteroidetes	K	Belongs to the sigma-70 factor family. ECF subfamily	sigG	-	-	ko:K03088	-	-	-	-	ko00000,ko03021	-	-	-	Sigma70_r2,Sigma70_r4_2
BYD3_k127_8142793_11	929703.KE386491_gene3664	4.98e-09	65.0	2EJIX@1|root,33D9U@2|Bacteria,4NXKW@976|Bacteroidetes,47SWM@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_8142793_8	313606.M23134_07537	4.503e-48	183.0	COG3735@1|root,COG3735@2|Bacteria,4NN4U@976|Bacteroidetes,47QPY@768503|Cytophagia	976|Bacteroidetes	S	TraB family	-	-	-	ko:K09973	-	-	-	-	ko00000	-	-	-	TraB
BYD3_k127_8142793_6	1237149.C900_03856	1.193e-60	216.0	COG3931@1|root,COG3931@2|Bacteria,4NMA3@976|Bacteroidetes	976|Bacteroidetes	E	N-formylglutamate amidohydrolase	-	-	-	-	-	-	-	-	-	-	-	-	FGase
BYD3_k127_8142793_3	1237149.C900_03855	4.561e-149	482.0	COG2170@1|root,COG2170@2|Bacteria,4NGA3@976|Bacteroidetes	976|Bacteroidetes	S	Glutamate-cysteine ligase family 2(GCS2)	-	-	-	ko:K06048	-	-	-	-	ko00000,ko01000	-	-	-	GCS2
BYD3_k127_8142793_1	1237149.C900_03854	1.196e-173	557.0	COG0189@1|root,COG0189@2|Bacteria,4NF2R@976|Bacteroidetes,47P1C@768503|Cytophagia	976|Bacteroidetes	HJ	RimK-like ATPgrasp N-terminal domain	-	-	-	-	-	-	-	-	-	-	-	-	Acetyltransf_1,Dala_Dala_lig_C,RLAN,RimK
BYD3_k127_8142793_5	1121440.AUMA01000020_gene1968	2.25e-80	274.0	COG3271@1|root,COG3271@2|Bacteria,1RAD5@1224|Proteobacteria,42QWA@68525|delta/epsilon subdivisions,2WMVM@28221|Deltaproteobacteria,2M8RA@213115|Desulfovibrionales	28221|Deltaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	Peptidase_C39,Peptidase_C39_2
BYD3_k127_8146093_4	401526.TcarDRAFT_2289	9.984e-29	123.0	2AV93@1|root,31M00@2|Bacteria,1V94N@1239|Firmicutes,4H7KF@909932|Negativicutes	909932|Negativicutes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_8146093_1	1191523.MROS_2634	4.755e-122	402.0	2B7NJ@1|root,32VIJ@2|Bacteria	2|Bacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_8146093_3	485918.Cpin_6983	1.725e-31	128.0	COG2149@1|root,COG2149@2|Bacteria,4NSIV@976|Bacteroidetes,1IYG8@117747|Sphingobacteriia	976|Bacteroidetes	S	Domain of unknown function (DUF202)	-	-	-	ko:K00389	-	-	-	-	ko00000	-	-	-	DUF202
BYD3_k127_8146093_0	305900.GV64_24125	1.662e-253	798.0	COG1472@1|root,COG1472@2|Bacteria,1N0Q4@1224|Proteobacteria,1RNK6@1236|Gammaproteobacteria,1XNYF@135619|Oceanospirillales	135619|Oceanospirillales	G	Glycosyl hydrolase family 3 C-terminal domain	-	-	3.2.1.21	ko:K05349	ko00460,ko00500,ko00940,ko01100,ko01110,map00460,map00500,map00940,map01100,map01110	-	R00026,R02558,R02887,R02985,R03527,R04949,R04998,R10035,R10039,R10040	RC00049,RC00059,RC00171,RC00262,RC00397,RC00451,RC00714,RC00746,RC01248	ko00000,ko00001,ko01000	-	GH3	-	Glyco_hydro_3,Glyco_hydro_3_C
BYD3_k127_8146093_2	935836.JAEL01000104_gene1332	2.22e-76	262.0	COG0003@1|root,COG0003@2|Bacteria,1TQZP@1239|Firmicutes,4HBKG@91061|Bacilli,1ZBGF@1386|Bacillus	91061|Bacilli	D	Anion-transporting ATPase	arsA	-	3.6.3.16	ko:K01551	-	-	-	-	ko00000,ko01000,ko02000	3.A.19.1,3.A.21.1,3.A.4.1	-	-	ArsA_ATPase
BYD3_k127_8182250_1	760192.Halhy_2281	2.358e-100	335.0	COG1082@1|root,COG1082@2|Bacteria,4NGKX@976|Bacteroidetes,1IQY9@117747|Sphingobacteriia	976|Bacteroidetes	G	Xylose isomerase domain protein TIM barrel	-	-	-	-	-	-	-	-	-	-	-	-	AP_endonuc_2
BYD3_k127_8182250_0	1185876.BN8_06039	0.0	1119.0	COG1413@1|root,COG2010@1|root,COG2133@1|root,COG1413@2|Bacteria,COG2010@2|Bacteria,COG2133@2|Bacteria,4NHPU@976|Bacteroidetes,47KZ1@768503|Cytophagia	976|Bacteroidetes	C	Cytochrome c	-	-	-	-	-	-	-	-	-	-	-	-	Cytochrom_C,HEAT_2
BYD3_k127_8182250_2	926549.KI421517_gene2980	6.769e-18	85.0	COG2120@1|root,COG2120@2|Bacteria,4NE9K@976|Bacteroidetes,47KXK@768503|Cytophagia	976|Bacteroidetes	G	PFAM GlcNAc-PI de-N-acetylase	-	-	-	-	-	-	-	-	-	-	-	-	PIG-L
BYD3_k127_8195577_5	1121898.Q766_05705	2.395e-172	551.0	COG3534@1|root,COG3534@2|Bacteria,4NGKW@976|Bacteroidetes,1HZE9@117743|Flavobacteriia,2NV03@237|Flavobacterium	976|Bacteroidetes	G	Alpha-L-arabinofuranosidase	-	-	3.2.1.55	ko:K01209	ko00520,map00520	-	R01762	-	ko00000,ko00001,ko01000	-	GH51	-	Alpha-L-AF_C,CBM_4_9
BYD3_k127_8195577_1	1121481.AUAS01000002_gene3227	0.0	1136.0	COG1554@1|root,COG1554@2|Bacteria,4NEWW@976|Bacteroidetes,47JFT@768503|Cytophagia	976|Bacteroidetes	G	Glycosyl hydrolase family 65, N-terminal domain	-	-	3.2.1.51	ko:K15923	ko00511,map00511	-	-	-	ko00000,ko00001,ko01000	-	GH95	-	Glyco_hyd_65N_2
BYD3_k127_8195577_0	1267533.KB906737_gene1782	0.0	1172.0	COG3119@1|root,COG3119@2|Bacteria,3Y3PF@57723|Acidobacteria	57723|Acidobacteria	P	PFAM Sulfatase	-	-	3.1.6.1	ko:K01130	ko00140,ko00600,map00140,map00600	-	R03980,R04856	RC00128,RC00231	ko00000,ko00001,ko01000	-	-	-	Sulfatase
BYD3_k127_8195577_4	153721.MYP_2739	2.642e-184	584.0	COG2133@1|root,COG2133@2|Bacteria,4NDV1@976|Bacteroidetes,47JGM@768503|Cytophagia	976|Bacteroidetes	G	COGs COG2133 Glucose sorbosone dehydrogenase	-	-	-	-	-	-	-	-	-	-	-	-	GSDH
BYD3_k127_8195577_8	1123278.KB893400_gene4118	1.54e-32	130.0	COG2010@1|root,COG2010@2|Bacteria,4NEXP@976|Bacteroidetes,47RM9@768503|Cytophagia	976|Bacteroidetes	C	Cytochrome C oxidase, cbb3-type, subunit III	-	-	1.7.2.1	ko:K00368,ko:K00405	ko00190,ko00910,ko01100,ko01120,ko02020,map00190,map00910,map01100,map01120,map02020	M00156,M00529	R00783,R00785	RC00086	ko00000,ko00001,ko00002,ko01000	3.D.4.3	-	-	Cytochrom_C,Cytochrome_CBB3
BYD3_k127_8195577_2	1185876.BN8_00281	2.352e-209	657.0	COG2851@1|root,COG2851@2|Bacteria,4NHKQ@976|Bacteroidetes,47MP2@768503|Cytophagia	976|Bacteroidetes	C	Na+/H+ antiporter family	-	-	-	ko:K03300	-	-	-	-	ko00000	2.A.11	-	-	CitMHS
BYD3_k127_8195577_3	760192.Halhy_4369	1.078e-191	607.0	COG3185@1|root,COG3185@2|Bacteria,4NGFD@976|Bacteroidetes,1IVVA@117747|Sphingobacteriia	976|Bacteroidetes	E	Pfam:DUF1446	-	-	-	-	-	-	-	-	-	-	-	-	AtuA
BYD3_k127_8195577_7	760192.Halhy_4370	1.834e-44	163.0	2CIU6@1|root,32S8H@2|Bacteria,4NSPK@976|Bacteroidetes,1IYC0@117747|Sphingobacteriia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_8195577_9	1250232.JQNJ01000001_gene3010	1.625e-12	69.0	2DPKQ@1|root,332JC@2|Bacteria,4NVYB@976|Bacteroidetes,1I5E3@117743|Flavobacteriia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_8195577_6	313606.M23134_00208	1.528e-50	192.0	COG3595@1|root,COG3595@2|Bacteria,4NJCC@976|Bacteroidetes,47MIA@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	DUF4097
BYD3_k127_8207350_0	1237149.C900_02195	5.812e-262	813.0	COG0318@1|root,COG0318@2|Bacteria,4PKQG@976|Bacteroidetes,47K42@768503|Cytophagia	976|Bacteroidetes	IQ	GH3 auxin-responsive promoter	-	-	-	-	-	-	-	-	-	-	-	-	GH3
BYD3_k127_8207350_5	1237149.C900_02194	3.681e-46	174.0	COG1280@1|root,COG1280@2|Bacteria,4NH3F@976|Bacteroidetes,47NRD@768503|Cytophagia	976|Bacteroidetes	E	PFAM Lysine exporter protein (LYSE YGGA)	-	-	-	-	-	-	-	-	-	-	-	-	LysE
BYD3_k127_8207350_2	1237149.C900_02193	9.686e-151	483.0	COG2304@1|root,COG2304@2|Bacteria,4NDUC@976|Bacteroidetes,47JUP@768503|Cytophagia	976|Bacteroidetes	S	PFAM von Willebrand factor type A	batA	-	-	ko:K07114	-	-	-	-	ko00000,ko02000	1.A.13.2.2,1.A.13.2.3	-	-	VWA
BYD3_k127_8207350_4	1237149.C900_02192	7.924e-67	239.0	2BPYJ@1|root,32ISF@2|Bacteria,4NRVJ@976|Bacteroidetes,47QN3@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_8207350_3	1237149.C900_02191	2.788e-136	439.0	COG1721@1|root,COG1721@2|Bacteria,4NE2N@976|Bacteroidetes,47JXB@768503|Cytophagia	976|Bacteroidetes	S	protein (some members contain a von Willebrand factor type A (vWA) domain)	-	-	-	-	-	-	-	-	-	-	-	-	DUF58
BYD3_k127_8207350_1	1237149.C900_02189	9.573e-236	752.0	COG1193@1|root,COG1193@2|Bacteria,4NFE6@976|Bacteroidetes,47KJ6@768503|Cytophagia	976|Bacteroidetes	L	Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity	mutS2	-	-	ko:K07456	ko03430,map03430	-	-	-	ko00000,ko00001,ko03400	-	-	-	MutS_V,Smr
BYD3_k127_8211857_6	1185876.BN8_00115	1.978e-71	249.0	COG4313@1|root,COG4313@2|Bacteria,4PPSZ@976|Bacteroidetes,47YRZ@768503|Cytophagia	976|Bacteroidetes	C	Protein involved in meta-pathway of phenol degradation	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_8211857_1	643867.Ftrac_0441	4.079e-181	583.0	COG3447@1|root,COG4251@1|root,COG3447@2|Bacteria,COG4251@2|Bacteria,4NI5R@976|Bacteroidetes	976|Bacteroidetes	T	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase	-	-	-	-	-	-	-	-	-	-	-	-	HATPase_c,HisKA,MASE1
BYD3_k127_8211857_2	1237149.C900_01796	2.591e-180	571.0	COG0010@1|root,COG0010@2|Bacteria,4NE5W@976|Bacteroidetes,47JES@768503|Cytophagia	976|Bacteroidetes	E	Belongs to the arginase family	-	-	3.5.3.8	ko:K01479	ko00340,ko01100,map00340,map01100	M00045	R02285	RC00221,RC00681	ko00000,ko00001,ko00002,ko01000	-	-	-	Arginase
BYD3_k127_8211857_5	504472.Slin_0733	1.948e-89	313.0	COG1914@1|root,COG1914@2|Bacteria,4NENE@976|Bacteroidetes,47MUM@768503|Cytophagia	976|Bacteroidetes	P	PFAM natural resistance-associated macrophage protein	mntH	-	-	-	-	-	-	-	-	-	-	-	Nramp
BYD3_k127_8211857_3	1237149.C900_01808	4.467e-96	322.0	COG1561@1|root,COG1561@2|Bacteria,4NEU4@976|Bacteroidetes,47JXA@768503|Cytophagia	976|Bacteroidetes	S	PFAM YicC-like family, N-terminal region	-	-	-	-	-	-	-	-	-	-	-	-	DUF1732,YicC_N
BYD3_k127_8211857_0	1237149.C900_01809	0.0	1191.0	COG0823@1|root,COG0823@2|Bacteria,4PNV1@976|Bacteroidetes,47YIP@768503|Cytophagia	976|Bacteroidetes	U	Involved in the tonB-independent uptake of proteins	-	-	-	-	-	-	-	-	-	-	-	-	PD40
BYD3_k127_8211857_4	1279009.ADICEAN_00311	3.164e-91	312.0	COG0665@1|root,COG0665@2|Bacteria,4NFCD@976|Bacteroidetes,47JI9@768503|Cytophagia	976|Bacteroidetes	E	PFAM FAD dependent oxidoreductase	thiO	-	-	-	-	-	-	-	-	-	-	-	DAO
BYD3_k127_8231227_0	1237149.C900_01647	0.0	1377.0	COG0046@1|root,COG0047@1|root,COG0046@2|Bacteria,COG0047@2|Bacteria,4NETY@976|Bacteroidetes,47NAM@768503|Cytophagia	976|Bacteroidetes	F	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL	purL	-	6.3.5.3	ko:K01952	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	M00048	R04463	RC00010,RC01160	ko00000,ko00001,ko00002,ko01000	-	-	-	AIRS_C,GATase_5
BYD3_k127_8253098_1	1185876.BN8_03448	2.053e-142	461.0	COG2114@1|root,COG2114@2|Bacteria,4NG5A@976|Bacteroidetes,47QPA@768503|Cytophagia	976|Bacteroidetes	T	Adenylate and Guanylate cyclase catalytic domain	-	-	4.6.1.1	ko:K01768	ko00230,ko02025,ko04113,ko04213,map00230,map02025,map04113,map04213	M00695	R00089,R00434	RC00295	ko00000,ko00001,ko00002,ko01000	-	-	-	Guanylate_cyc
BYD3_k127_8253098_3	1279009.ADICEAN_04005	4.623e-16	93.0	COG5184@1|root,COG5184@2|Bacteria	2|Bacteria	DZ	guanyl-nucleotide exchange factor activity	-	-	-	-	-	-	-	-	-	-	-	-	Cadherin-like,Cu-binding_MopE,RCC1,RCC1_2
BYD3_k127_8253098_5	761193.Runsl_2876	2.328e-11	77.0	COG2133@1|root,COG3291@1|root,COG2133@2|Bacteria,COG3291@2|Bacteria,4NF7B@976|Bacteroidetes,47MQS@768503|Cytophagia	976|Bacteroidetes	G	PKD domain	-	-	-	-	-	-	-	-	-	-	-	-	GSDH,PKD
BYD3_k127_8253098_6	1463885.KL578367_gene1253	1.803e-08	68.0	COG2340@1|root,COG2340@2|Bacteria,2GM57@201174|Actinobacteria	201174|Actinobacteria	T	protein with SCP PR1 domains	-	-	-	-	-	-	-	-	-	-	-	-	CAP
BYD3_k127_8253098_4	1237149.C900_02265	1.777e-12	77.0	COG2197@1|root,COG2197@2|Bacteria,4NUWM@976|Bacteroidetes	976|Bacteroidetes	K	helix_turn_helix, Lux Regulon	-	-	-	-	-	-	-	-	-	-	-	-	GerE
BYD3_k127_8253098_0	929703.KE386491_gene1532	1.323e-160	512.0	COG1028@1|root,COG1028@2|Bacteria,4NHSE@976|Bacteroidetes,47N8M@768503|Cytophagia	976|Bacteroidetes	IQ	Enoyl-(Acyl carrier protein) reductase	-	-	-	-	-	-	-	-	-	-	-	-	adh_short
BYD3_k127_8253098_2	700598.Niako_4265	3.649e-93	309.0	COG2207@1|root,COG2207@2|Bacteria,4NGWC@976|Bacteroidetes,1IR95@117747|Sphingobacteriia	976|Bacteroidetes	K	SMART helix-turn-helix- domain containing protein AraC type	-	-	-	-	-	-	-	-	-	-	-	-	HTH_18
BYD3_k127_8277809_3	697303.Thewi_1548	1.064e-95	326.0	COG1929@1|root,COG1929@2|Bacteria,1TPSI@1239|Firmicutes,249SH@186801|Clostridia,42EMH@68295|Thermoanaerobacterales	186801|Clostridia	G	Belongs to the glycerate kinase type-1 family	glxK	-	2.7.1.165	ko:K00865	ko00260,ko00561,ko00630,ko01100,ko01120,ko01130,map00260,map00561,map00630,map01100,map01120,map01130	-	R08572	RC00002,RC00428	ko00000,ko00001,ko01000	-	-	-	Gly_kinase
BYD3_k127_8277809_0	1237149.C900_04390	7.017e-240	746.0	COG0541@1|root,COG0541@2|Bacteria,4NDZ2@976|Bacteroidetes,47MYD@768503|Cytophagia	976|Bacteroidetes	U	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY	ffh	-	3.6.5.4	ko:K03106	ko02024,ko03060,ko03070,map02024,map03060,map03070	M00335	-	-	ko00000,ko00001,ko00002,ko01000,ko02044	3.A.5.1,3.A.5.2,3.A.5.7,3.A.5.8,3.A.5.9	-	-	SRP54,SRP54_N,SRP_SPB
BYD3_k127_8277809_4	1237149.C900_04901	8.318e-55	196.0	COG0457@1|root,COG0457@2|Bacteria,4NQR8@976|Bacteroidetes,47YIZ@768503|Cytophagia	976|Bacteroidetes	S	Protein of unknown function (DUF2911)	-	-	-	-	-	-	-	-	-	-	-	-	DUF2911
BYD3_k127_8277809_5	1237149.C900_04900	9.122e-42	158.0	COG4067@1|root,COG4067@2|Bacteria,4NS86@976|Bacteroidetes,47RH0@768503|Cytophagia	976|Bacteroidetes	O	Putative ATP-dependant zinc protease	-	-	-	-	-	-	-	-	-	-	-	-	Zn_protease
BYD3_k127_8277809_1	1124780.ANNU01000073_gene711	1.398e-134	434.0	COG0189@1|root,COG0189@2|Bacteria,4NED4@976|Bacteroidetes,47KJX@768503|Cytophagia	976|Bacteroidetes	HJ	Belongs to the RimK family	rimK	-	-	ko:K05844	-	-	-	-	ko00000,ko01000,ko03009	-	-	-	RimK
BYD3_k127_8277809_2	1121904.ARBP01000002_gene7256	7.908e-128	415.0	COG3608@1|root,COG3608@2|Bacteria,4NE8S@976|Bacteroidetes,47KAM@768503|Cytophagia	976|Bacteroidetes	S	PFAM Succinylglutamate desuccinylase Aspartoacylase family	-	-	-	ko:K06987	-	-	-	-	ko00000	-	-	-	AstE_AspA
BYD3_k127_8277809_6	1237149.C900_02720	1.78e-40	156.0	COG2825@1|root,COG2825@2|Bacteria,4NQHJ@976|Bacteroidetes,47QWE@768503|Cytophagia	976|Bacteroidetes	M	PFAM Outer membrane protein (OmpH-like)	ompH	-	-	ko:K06142	-	-	-	-	ko00000	-	-	-	OmpH
BYD3_k127_8277809_7	1408306.JHXX01000009_gene3362	0.0008668	42.0	COG1502@1|root,COG1502@2|Bacteria,1TRJE@1239|Firmicutes,248ZE@186801|Clostridia,4BWMY@830|Butyrivibrio	186801|Clostridia	I	ORF6N domain	-	-	-	-	-	-	-	-	-	-	-	-	ORF6N
BYD3_k127_8310373_6	714943.Mucpa_2163	5.644e-34	132.0	COG1136@1|root,COG1136@2|Bacteria,4NFCG@976|Bacteroidetes,1IQRF@117747|Sphingobacteriia	976|Bacteroidetes	V	Part of the ABC transporter complex LolCDE involved in the translocation of	-	-	-	ko:K09810	ko02010,map02010	M00255	-	-	ko00000,ko00001,ko00002,ko01000,ko02000	3.A.1.125	-	-	ABC_tran
BYD3_k127_8310373_2	1123277.KB893193_gene3928	1.81e-116	387.0	COG0654@1|root,COG0654@2|Bacteria,4NGIU@976|Bacteroidetes,47NYU@768503|Cytophagia	976|Bacteroidetes	CH	FAD binding domain	-	-	-	-	-	-	-	-	-	-	-	-	FAD_binding_3
BYD3_k127_8310373_3	929562.Emtol_1339	1.752e-73	259.0	COG2972@1|root,COG2972@2|Bacteria,4NFDP@976|Bacteroidetes,47PD7@768503|Cytophagia	976|Bacteroidetes	T	Histidine kinase	-	-	-	-	-	-	-	-	-	-	-	-	His_kinase
BYD3_k127_8310373_5	761193.Runsl_5368	9.475e-48	176.0	COG0454@1|root,COG0456@2|Bacteria,4NTK3@976|Bacteroidetes,47R0F@768503|Cytophagia	976|Bacteroidetes	K	FR47-like protein	-	-	-	ko:K03825	-	-	-	-	ko00000,ko01000	-	-	-	Acetyltransf_1,Acetyltransf_7
BYD3_k127_8310373_4	1185876.BN8_01500	1.274e-63	229.0	COG3279@1|root,COG3279@2|Bacteria,4NHDT@976|Bacteroidetes,47N4S@768503|Cytophagia	976|Bacteroidetes	T	LytTr DNA-binding domain	-	-	-	-	-	-	-	-	-	-	-	-	LytTR,Response_reg
BYD3_k127_8310373_0	925409.KI911562_gene550	6.816e-186	589.0	COG1171@1|root,COG1171@2|Bacteria,4NEY2@976|Bacteroidetes,1INNU@117747|Sphingobacteriia	976|Bacteroidetes	E	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA	ilvA	-	4.3.1.19	ko:K01754	ko00260,ko00290,ko01100,ko01110,ko01130,ko01200,ko01230,map00260,map00290,map01100,map01110,map01130,map01200,map01230	M00570	R00220,R00996	RC00418,RC02600	ko00000,ko00001,ko00002,ko01000	-	-	-	PALP,Thr_dehydrat_C
BYD3_k127_8310373_1	485918.Cpin_1923	1.037e-179	566.0	COG0059@1|root,COG0059@2|Bacteria,4NFYV@976|Bacteroidetes,1IQ69@117747|Sphingobacteriia	976|Bacteroidetes	EH	Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate	ilvC	-	1.1.1.86	ko:K00053	ko00290,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00290,map00770,map01100,map01110,map01130,map01210,map01230	M00019,M00570	R03051,R04439,R04440,R05068,R05069,R05071	RC00726,RC00836,RC00837,RC01726	ko00000,ko00001,ko00002,ko01000	-	-	-	IlvC,IlvN
BYD3_k127_8358102_2	929562.Emtol_3167	1.623e-87	292.0	COG0627@1|root,COG0627@2|Bacteria,4NE7D@976|Bacteroidetes,47KC0@768503|Cytophagia	976|Bacteroidetes	S	esterase	-	-	-	-	-	-	-	-	-	-	-	-	Esterase
BYD3_k127_8358102_1	929562.Emtol_2213	2.724e-115	376.0	COG1028@1|root,COG1028@2|Bacteria,4P0CC@976|Bacteroidetes,47TG3@768503|Cytophagia	976|Bacteroidetes	IQ	KR domain	-	-	-	-	-	-	-	-	-	-	-	-	adh_short_C2
BYD3_k127_8358102_4	575590.HMPREF0156_00422	3.826e-19	90.0	2EM8I@1|root,33EXM@2|Bacteria,4P60J@976|Bacteroidetes	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_8358102_0	929562.Emtol_3627	3.655e-120	394.0	COG1171@1|root,COG1171@2|Bacteria,4NEY2@976|Bacteroidetes,47KNZ@768503|Cytophagia	976|Bacteroidetes	E	Pyridoxal-phosphate dependent enzyme	ilvA	-	4.3.1.19	ko:K01754	ko00260,ko00290,ko01100,ko01110,ko01130,ko01200,ko01230,map00260,map00290,map01100,map01110,map01130,map01200,map01230	M00570	R00220,R00996	RC00418,RC02600	ko00000,ko00001,ko00002,ko01000	-	-	-	PALP
BYD3_k127_8358102_3	1237149.C900_01531	1.044e-64	224.0	COG2849@1|root,COG2849@2|Bacteria,4NK1X@976|Bacteroidetes,47NFY@768503|Cytophagia	976|Bacteroidetes	S	repeat protein	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_8394463_1	700598.Niako_3938	1.945e-193	608.0	COG0405@1|root,COG0405@2|Bacteria,4NG3X@976|Bacteroidetes,1IPXR@117747|Sphingobacteriia	976|Bacteroidetes	E	Gamma-glutamyltranspeptidase	-	-	2.3.2.2,3.4.19.13	ko:K00681	ko00430,ko00460,ko00480,ko01100,map00430,map00460,map00480,map01100	-	R00494,R01262,R01687,R03867,R03916,R03970,R03971,R04935	RC00064,RC00090,RC00096	ko00000,ko00001,ko01000,ko01002	-	-	-	G_glu_transpept
BYD3_k127_8394463_3	1123057.P872_05890	6.436e-83	280.0	28NN4@1|root,2ZBNJ@2|Bacteria,4NMVI@976|Bacteroidetes,47PGF@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_8394463_4	1123073.KB899241_gene3088	1.103e-60	214.0	2DPQD@1|root,332Z4@2|Bacteria,1R3FS@1224|Proteobacteria,1T67D@1236|Gammaproteobacteria,1X7FX@135614|Xanthomonadales	1224|Proteobacteria	S	Gluconate 2-dehydrogenase subunit 3	-	-	-	-	-	-	-	-	-	-	-	-	Gluconate_2-dh3
BYD3_k127_8394463_0	1123073.KB899242_gene1193	2.545e-284	882.0	COG2303@1|root,COG2303@2|Bacteria,1MU3F@1224|Proteobacteria,1RPBQ@1236|Gammaproteobacteria,1X4F1@135614|Xanthomonadales	135614|Xanthomonadales	E	GMC oxidoreductase	-	-	-	-	-	-	-	-	-	-	-	-	GMC_oxred_C,GMC_oxred_N
BYD3_k127_8394463_2	269798.CHU_1453	1.196e-118	383.0	COG1432@1|root,COG1432@2|Bacteria,4NGF1@976|Bacteroidetes,47KWJ@768503|Cytophagia	976|Bacteroidetes	S	OST-HTH/LOTUS domain	-	-	-	-	-	-	-	-	-	-	-	-	NYN,OST-HTH
BYD3_k127_8399865_10	649349.Lbys_0416	0.0003157	46.0	2CMJR@1|root,32SF0@2|Bacteria,4P2TE@976|Bacteroidetes	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_8399865_8	1237149.C900_05315	3.453e-58	210.0	2C9AB@1|root,2ZB91@2|Bacteria,4NKQ3@976|Bacteroidetes,47M3Q@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_8399865_1	1237149.C900_05314	5.427e-224	716.0	COG4206@1|root,COG4206@2|Bacteria,4NGBJ@976|Bacteroidetes,47J8T@768503|Cytophagia	976|Bacteroidetes	H	TonB-dependent Receptor Plug Domain	-	-	-	-	-	-	-	-	-	-	-	-	CarbopepD_reg_2,Plug,TonB_dep_Rec
BYD3_k127_8399865_0	485918.Cpin_1254	0.0	1307.0	COG0495@1|root,COG0495@2|Bacteria,4NE5K@976|Bacteroidetes,1IP89@117747|Sphingobacteriia	976|Bacteroidetes	J	Belongs to the class-I aminoacyl-tRNA synthetase family	leuS	GO:0003674,GO:0003824,GO:0004812,GO:0004823,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006429,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576	6.1.1.4	ko:K01869	ko00970,map00970	M00359,M00360	R03657	RC00055,RC00523	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029	-	-	-	Anticodon_1,DUF559,tRNA-synt_1,tRNA-synt_1_2
BYD3_k127_8399865_4	1237149.C900_05642	2.873e-177	559.0	COG0332@1|root,COG0332@2|Bacteria,4NFIN@976|Bacteroidetes,47JAR@768503|Cytophagia	976|Bacteroidetes	I	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids	fabH	-	2.3.1.180	ko:K00648	ko00061,ko01100,ko01212,map00061,map01100,map01212	M00082,M00083	R10707	RC00004,RC02729,RC02888	ko00000,ko00001,ko00002,ko01000,ko01004	-	-	-	ACP_syn_III,ACP_syn_III_C
BYD3_k127_8399865_5	700598.Niako_7264	9.703e-164	527.0	COG2610@1|root,COG2610@2|Bacteria,4NFBD@976|Bacteroidetes,1IPQN@117747|Sphingobacteriia	976|Bacteroidetes	EG	COGs COG2610 H gluconate symporter and related permease	gntT	-	-	ko:K06155	-	-	-	-	ko00000,ko02000	2.A.8.1.4	-	-	GntP_permease
BYD3_k127_8399865_7	1270196.JCKI01000002_gene586	1.246e-74	253.0	COG0251@1|root,COG0251@2|Bacteria,4NMAM@976|Bacteroidetes,1IS1P@117747|Sphingobacteriia	976|Bacteroidetes	J	PFAM Endoribonuclease L-PSP	-	-	-	-	-	-	-	-	-	-	-	-	YjgF_endoribonc
BYD3_k127_8399865_6	1123248.KB893315_gene3085	2.58e-128	419.0	COG3616@1|root,COG3616@2|Bacteria,4NF5K@976|Bacteroidetes,1IPIR@117747|Sphingobacteriia	976|Bacteroidetes	E	PFAM Alanine racemase, N-terminal	-	-	-	-	-	-	-	-	-	-	-	-	Ala_racemase_N,D-ser_dehydrat
BYD3_k127_8399865_3	929703.KE386491_gene3868	5.321e-191	600.0	COG2355@1|root,COG2355@2|Bacteria,4NDYZ@976|Bacteroidetes,47JHU@768503|Cytophagia	976|Bacteroidetes	E	PFAM Peptidase M19, renal dipeptidase	-	-	3.4.13.19	ko:K01273	-	-	-	-	ko00000,ko00537,ko01000,ko01002,ko04147	-	-	-	Peptidase_M19
BYD3_k127_8399865_2	1237149.C900_02674	3.607e-212	672.0	COG0793@1|root,COG0793@2|Bacteria,4NDWU@976|Bacteroidetes,47JTG@768503|Cytophagia	976|Bacteroidetes	M	Belongs to the peptidase S41A family	prc	-	3.4.21.102	ko:K03797	-	-	-	-	ko00000,ko01000,ko01002	-	-	-	PDZ_2,Peptidase_S41
BYD3_k127_8400194_1	1237149.C900_04328	1.723e-143	459.0	COG0207@1|root,COG0207@2|Bacteria,4NEC2@976|Bacteroidetes,47KE8@768503|Cytophagia	976|Bacteroidetes	F	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis	thyA	-	2.1.1.45	ko:K00560	ko00240,ko00670,ko01100,ko01523,map00240,map00670,map01100,map01523	M00053	R02101	RC00219,RC00332	ko00000,ko00001,ko00002,ko01000	-	-	-	Thymidylat_synt
BYD3_k127_8400194_7	1279009.ADICEAN_01481	7.008e-40	159.0	28M3Z@1|root,32ZEY@2|Bacteria,4NUZS@976|Bacteroidetes,47SGM@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_8400194_3	1237149.C900_00456	1.139e-108	355.0	COG1657@1|root,COG1657@2|Bacteria,4NFMT@976|Bacteroidetes,47KEV@768503|Cytophagia	976|Bacteroidetes	I	Domain of unknown function (DUF4159)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4159
BYD3_k127_8400194_2	1185876.BN8_00223	1.161e-115	389.0	COG4636@1|root,COG4636@2|Bacteria,4NFKR@976|Bacteroidetes,47K44@768503|Cytophagia	976|Bacteroidetes	S	Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella	-	-	-	-	-	-	-	-	-	-	-	-	VCBS
BYD3_k127_8400194_6	1237149.C900_04357	1.986e-50	181.0	COG3682@1|root,COG3682@2|Bacteria,4NNVM@976|Bacteroidetes,47Q5Z@768503|Cytophagia	976|Bacteroidetes	K	PFAM Penicillinase repressor	-	-	-	-	-	-	-	-	-	-	-	-	Penicillinase_R
BYD3_k127_8400194_5	1237149.C900_04356	8.604e-62	234.0	COG0810@1|root,COG4219@1|root,COG0810@2|Bacteria,COG4219@2|Bacteria,4NDWS@976|Bacteroidetes,47M7Q@768503|Cytophagia	976|Bacteroidetes	KMT	PFAM BlaR1 peptidase M56	-	-	-	-	-	-	-	-	-	-	-	-	CarbopepD_reg_2,Peptidase_M56,Plug,TonB_C
BYD3_k127_8400194_9	1123400.KB904747_gene458	8.471e-32	134.0	COG0726@1|root,COG0726@2|Bacteria,1NHC2@1224|Proteobacteria	1224|Proteobacteria	G	Protein of unknown function (DUF3298)	yjeA	-	-	-	-	-	-	-	-	-	-	-	DUF3298,DUF4163
BYD3_k127_8400194_4	1237149.C900_01420	8.184e-105	353.0	COG0526@1|root,COG0526@2|Bacteria,4NEX3@976|Bacteroidetes,47JZP@768503|Cytophagia	976|Bacteroidetes	O	PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen	ccmG	-	-	-	-	-	-	-	-	-	-	-	AhpC-TSA,DUF4369
BYD3_k127_8400194_0	153721.MYP_2222	1.142e-221	696.0	COG0064@1|root,COG0064@2|Bacteria,4NF3B@976|Bacteroidetes,47K7E@768503|Cytophagia	976|Bacteroidetes	J	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)	gatB	-	6.3.5.6,6.3.5.7	ko:K02434	ko00970,ko01100,map00970,map01100	-	R03905,R04212	RC00010	ko00000,ko00001,ko01000,ko03029	-	-	-	GatB_N,GatB_Yqey
BYD3_k127_8400194_8	1124780.ANNU01000032_gene1250	3.624e-34	133.0	COG0013@1|root,COG0013@2|Bacteria,4NFHW@976|Bacteroidetes,47KKH@768503|Cytophagia	976|Bacteroidetes	J	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain	alaS	GO:0003674,GO:0003824,GO:0004812,GO:0004813,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006412,GO:0006418,GO:0006419,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016597,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0031406,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0036094,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043177,GO:0043412,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576	6.1.1.7	ko:K01872	ko00970,map00970	M00359,M00360	R03038	RC00055,RC00523	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	-	-	-	DHHA1,tRNA-synt_2c,tRNA_SAD
BYD3_k127_840119_6	1163617.SCD_n02878	9.096e-18	85.0	COG4976@1|root,COG4976@2|Bacteria,1QWSE@1224|Proteobacteria,2VWGK@28216|Betaproteobacteria	28216|Betaproteobacteria	S	Methyltransferase domain	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_840119_0	1454007.JAUG01000019_gene1129	8.531e-173	549.0	COG0399@1|root,COG0399@2|Bacteria,4NEIU@976|Bacteroidetes,1J17Y@117747|Sphingobacteriia	976|Bacteroidetes	M	DegT/DnrJ/EryC1/StrS aminotransferase family	wecE	-	2.6.1.59	ko:K02805	-	-	-	-	ko00000,ko01000,ko01007	-	-	-	DegT_DnrJ_EryC1
BYD3_k127_840119_2	1408813.AYMG01000017_gene5471	1.522e-68	248.0	COG0438@1|root,COG0438@2|Bacteria,4NTDI@976|Bacteroidetes	976|Bacteroidetes	M	Glycosyl transferases group 1	-	-	-	-	-	-	-	-	-	-	-	-	Glycos_transf_1
BYD3_k127_840119_4	1288494.EBAPG3_29610	3.263e-35	143.0	COG2242@1|root,COG2242@2|Bacteria,1RI7P@1224|Proteobacteria,2WC8P@28216|Betaproteobacteria,374GB@32003|Nitrosomonadales	28216|Betaproteobacteria	H	Methyltransferase FkbM domain	-	-	-	-	-	-	-	-	-	-	-	-	Methyltransf_21
BYD3_k127_840119_1	1278307.KB907037_gene649	2.674e-90	307.0	COG1216@1|root,COG1216@2|Bacteria,1N3SS@1224|Proteobacteria,1SZ3P@1236|Gammaproteobacteria	1236|Gammaproteobacteria	S	Glycosyltransferase like family 2	-	-	-	-	-	-	-	-	-	-	-	-	Glycos_transf_2
BYD3_k127_840119_5	1278307.KB907037_gene648	6.731e-25	111.0	COG4122@1|root,COG4122@2|Bacteria,1N96U@1224|Proteobacteria	1224|Proteobacteria	S	Methyltransferase domain	-	-	-	-	-	-	-	-	-	-	-	-	Methyltransf_24
BYD3_k127_840119_3	1278307.KB907037_gene647	1.003e-50	188.0	2E649@1|root,330T6@2|Bacteria,1P1EZ@1224|Proteobacteria,1SST2@1236|Gammaproteobacteria	1236|Gammaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_8415025_1	1107311.Q767_15090	2.306e-77	263.0	COG0560@1|root,COG0560@2|Bacteria,4NIF2@976|Bacteroidetes,1HZ6P@117743|Flavobacteriia,2NT55@237|Flavobacterium	976|Bacteroidetes	E	haloacid dehalogenase-like hydrolase	-	-	-	-	-	-	-	-	-	-	-	-	HAD
BYD3_k127_8415025_0	391596.PBAL39_14189	1.782e-139	459.0	COG1680@1|root,COG1729@1|root,COG1680@2|Bacteria,COG1729@2|Bacteria,4NGKK@976|Bacteroidetes,1IRV5@117747|Sphingobacteriia	976|Bacteroidetes	V	COG1680 Beta-lactamase class C and other penicillin binding	-	-	-	-	-	-	-	-	-	-	-	-	Beta-lactamase,DUF3471,TPR_2
BYD3_k127_8415025_2	1267211.KI669560_gene1979	0.0001048	55.0	COG0457@1|root,COG0457@2|Bacteria	1267211.KI669560_gene1979|-	S	peptidyl-tyrosine sulfation	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_8420009_1	1123057.P872_02175	5.804e-134	429.0	COG0823@1|root,COG0823@2|Bacteria,4NG4S@976|Bacteroidetes,47KMG@768503|Cytophagia	976|Bacteroidetes	U	WD40-like Beta Propeller Repeat	-	-	-	-	-	-	-	-	-	-	-	-	PD40
BYD3_k127_8420009_2	742766.HMPREF9455_00929	1.796e-68	250.0	COG1119@1|root,COG1119@2|Bacteria,4NEWY@976|Bacteroidetes,2FMN3@200643|Bacteroidia,22X6F@171551|Porphyromonadaceae	976|Bacteroidetes	P	ATPases associated with a variety of cellular activities	modF	-	-	ko:K05776	ko02010,map02010	M00189	-	-	ko00000,ko00001,ko00002,ko02000	-	-	-	ABC_tran
BYD3_k127_8420009_0	1123248.KB893326_gene1394	0.0	1178.0	COG1629@1|root,COG4771@2|Bacteria,4NEIG@976|Bacteroidetes,1IPTQ@117747|Sphingobacteriia	976|Bacteroidetes	P	Outer membrane protein beta-barrel family	-	-	-	-	-	-	-	-	-	-	-	-	CarbopepD_reg_2,CarboxypepD_reg,OMP_b-brl_3,Plug
BYD3_k127_8420009_3	1348583.ATLH01000029_gene1380	6.706e-54	191.0	COG2010@1|root,COG2010@2|Bacteria,4NN91@976|Bacteroidetes,1I17I@117743|Flavobacteriia,1F9I9@104264|Cellulophaga	976|Bacteroidetes	C	Haem-binding domain	-	-	-	-	-	-	-	-	-	-	-	-	Haem_bd
BYD3_k127_8423826_1	1121481.AUAS01000001_gene4586	0.0007678	48.0	COG1404@1|root,COG1404@2|Bacteria,4NX4G@976|Bacteroidetes,47W3K@768503|Cytophagia	976|Bacteroidetes	O	Belongs to the peptidase S8 family	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_8423826_0	1237149.C900_00494	3.695e-255	807.0	COG4206@1|root,COG4206@2|Bacteria,4PKCR@976|Bacteroidetes,47Y24@768503|Cytophagia	976|Bacteroidetes	H	TonB dependent receptor	-	-	-	-	-	-	-	-	-	-	-	-	CarbopepD_reg_2,Plug,TonB_dep_Rec
BYD3_k127_8429487_6	929562.Emtol_1095	1.324e-66	230.0	COG2755@1|root,COG2755@2|Bacteria,4NHV1@976|Bacteroidetes,47KAU@768503|Cytophagia	976|Bacteroidetes	E	GDSL-like Lipase/Acylhydrolase	-	-	-	-	-	-	-	-	-	-	-	-	Lipase_GDSL_2
BYD3_k127_8429487_0	1237149.C900_05943	9.104e-136	441.0	COG0681@1|root,COG0681@2|Bacteria,4NFTP@976|Bacteroidetes,47JH7@768503|Cytophagia	976|Bacteroidetes	U	Belongs to the peptidase S26 family	lepB	-	3.4.21.89	ko:K03100	ko02024,ko03060,map02024,map03060	-	-	-	ko00000,ko00001,ko01000,ko01002	-	-	-	Peptidase_S24,Peptidase_S26
BYD3_k127_8429487_4	1279009.ADICEAN_00515	2.02e-93	329.0	COG1305@1|root,COG1305@2|Bacteria,4NEKT@976|Bacteroidetes,47NCY@768503|Cytophagia	976|Bacteroidetes	E	Domain of Unknown Function with PDB structure (DUF3857)	-	-	-	-	-	-	-	-	-	-	-	-	DUF3857,DUF3858,Transglut_core
BYD3_k127_8429487_5	760192.Halhy_5983	1.007e-89	300.0	COG3525@1|root,COG3525@2|Bacteria,4NE08@976|Bacteroidetes,1IPND@117747|Sphingobacteriia	976|Bacteroidetes	G	Glycosyl hydrolase family 20, catalytic domain	-	-	3.2.1.52	ko:K12373	ko00511,ko00513,ko00520,ko00531,ko00603,ko00604,ko01100,ko04142,map00511,map00513,map00520,map00531,map00603,map00604,map01100,map04142	M00079	R00022,R06004,R11316	RC00049	ko00000,ko00001,ko00002,ko01000,ko03110	-	GH20	-	CHB_HEX_C_1,Glyco_hydro_20,Glyco_hydro_20b
BYD3_k127_8429487_1	760192.Halhy_5983	3.295e-121	396.0	COG3525@1|root,COG3525@2|Bacteria,4NE08@976|Bacteroidetes,1IPND@117747|Sphingobacteriia	976|Bacteroidetes	G	Glycosyl hydrolase family 20, catalytic domain	-	-	3.2.1.52	ko:K12373	ko00511,ko00513,ko00520,ko00531,ko00603,ko00604,ko01100,ko04142,map00511,map00513,map00520,map00531,map00603,map00604,map01100,map04142	M00079	R00022,R06004,R11316	RC00049	ko00000,ko00001,ko00002,ko01000,ko03110	-	GH20	-	CHB_HEX_C_1,Glyco_hydro_20,Glyco_hydro_20b
BYD3_k127_8429487_3	1189612.A33Q_1390	2.645e-99	329.0	COG4221@1|root,COG4221@2|Bacteria,4NFSY@976|Bacteroidetes,47KFB@768503|Cytophagia	976|Bacteroidetes	S	Belongs to the short-chain dehydrogenases reductases (SDR) family	-	-	-	-	-	-	-	-	-	-	-	-	adh_short
BYD3_k127_8429487_8	313606.M23134_07170	5.925e-59	220.0	COG0457@1|root,COG4249@1|root,COG0457@2|Bacteria,COG4249@2|Bacteria,4NN66@976|Bacteroidetes,47Q5A@768503|Cytophagia	976|Bacteroidetes	S	Caspase domain	-	-	-	-	-	-	-	-	-	-	-	-	Peptidase_C14
BYD3_k127_8429487_7	946077.W5A_08142	1.163e-62	220.0	COG1670@1|root,COG1670@2|Bacteria,4NNE4@976|Bacteroidetes,1I1AJ@117743|Flavobacteriia	976|Bacteroidetes	J	COGs COG1670 Acetyltransferase including N-acetylase of ribosomal protein	-	-	-	-	-	-	-	-	-	-	-	-	Acetyltransf_3
BYD3_k127_8429487_9	1348583.ATLH01000031_gene1875	3.137e-34	138.0	COG0454@1|root,COG0456@2|Bacteria,4NSKZ@976|Bacteroidetes,1I3XC@117743|Flavobacteriia	976|Bacteroidetes	K	Acetyltransferase (GNAT) domain	-	-	2.3.1.57	ko:K22441	-	-	-	-	ko00000,ko01000	-	-	-	Acetyltransf_1,Acetyltransf_10
BYD3_k127_8429487_2	509635.N824_03795	5.684e-105	346.0	COG0666@1|root,COG0666@2|Bacteria,4NJN4@976|Bacteroidetes,1IRR6@117747|Sphingobacteriia	976|Bacteroidetes	S	ankyrin repeats	-	-	-	-	-	-	-	-	-	-	-	-	Ank
BYD3_k127_844692_0	761193.Runsl_0493	2.944e-184	581.0	COG0627@1|root,COG0627@2|Bacteria,4NIU8@976|Bacteroidetes,47NUH@768503|Cytophagia	976|Bacteroidetes	E	Putative esterase	-	-	-	-	-	-	-	-	-	-	-	-	Esterase
BYD3_k127_844692_1	1121904.ARBP01000003_gene6353	4.771e-183	579.0	COG1312@1|root,COG1312@2|Bacteria,4NIMS@976|Bacteroidetes,47JVK@768503|Cytophagia	976|Bacteroidetes	G	D-mannonate dehydratase (UxuA)	-	-	4.2.1.8	ko:K01686	ko00040,ko01100,map00040,map01100	M00061	R05606	RC00543	ko00000,ko00001,ko00002,ko01000	-	-	-	UxuA
BYD3_k127_844692_2	509635.N824_28480	2.16e-83	282.0	COG1272@1|root,COG1272@2|Bacteria,4NM95@976|Bacteroidetes,1IU9Q@117747|Sphingobacteriia	976|Bacteroidetes	S	Haemolysin-III related	hly-III	-	-	ko:K11068	-	-	-	-	ko00000,ko02042	-	-	-	HlyIII
BYD3_k127_844692_3	1380384.JADN01000003_gene337	1.584e-06	57.0	COG5563@1|root,COG5563@2|Bacteria,4NMV9@976|Bacteroidetes,1I1RQ@117743|Flavobacteriia	976|Bacteroidetes	N	domain, Protein	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_8455048_9	643867.Ftrac_2359	2.748e-28	124.0	COG0526@1|root,COG0526@2|Bacteria,4P4VR@976|Bacteroidetes,47VN1@768503|Cytophagia	976|Bacteroidetes	O	Thioredoxin-like	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_8455048_3	1288963.ADIS_2559	6.865e-107	352.0	COG5285@1|root,COG5285@2|Bacteria,4NFFH@976|Bacteroidetes,47NG3@768503|Cytophagia	976|Bacteroidetes	Q	Phytanoyl-CoA dioxygenase (PhyH)	-	-	-	-	-	-	-	-	-	-	-	-	PhyH
BYD3_k127_8455048_2	1185876.BN8_02272	1.744e-235	743.0	COG4225@1|root,COG4225@2|Bacteria,4NF1N@976|Bacteroidetes,47K76@768503|Cytophagia	976|Bacteroidetes	S	Heparinase II/III-like protein	-	-	-	-	-	-	-	-	-	-	-	-	DUF4962,Hepar_II_III
BYD3_k127_8455048_4	1506583.JQJY01000002_gene1570	1.737e-94	316.0	2EIJH@1|root,33CAU@2|Bacteria,4PD0M@976|Bacteroidetes,1IDIN@117743|Flavobacteriia,2NYIG@237|Flavobacterium	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_8455048_1	1453505.JASY01000005_gene1438	2.489e-249	782.0	COG4805@1|root,COG4805@2|Bacteria,4NFAK@976|Bacteroidetes,1HXAT@117743|Flavobacteriia,2NUPC@237|Flavobacterium	976|Bacteroidetes	S	Bacterial protein of unknown function (DUF885)	-	-	-	-	-	-	-	-	-	-	-	-	DUF885
BYD3_k127_8455048_7	1121481.AUAS01000005_gene2087	4.498e-78	266.0	COG0500@1|root,COG2226@2|Bacteria,4NNUK@976|Bacteroidetes	976|Bacteroidetes	Q	Nodulation protein S (NodS)	-	-	-	-	-	-	-	-	-	-	-	-	Methyltransf_11,Methyltransf_23,Methyltransf_25
BYD3_k127_8455048_0	1239962.C943_00789	1.112e-297	927.0	COG0823@1|root,COG1506@1|root,COG0823@2|Bacteria,COG1506@2|Bacteria,4NHS5@976|Bacteroidetes,47MWY@768503|Cytophagia	976|Bacteroidetes	EU	Peptidase S9 prolyl oligopeptidase active site domain protein	-	-	-	-	-	-	-	-	-	-	-	-	FGE-sulfatase,PD40,Peptidase_S9
BYD3_k127_8455048_8	1202532.FF52_04520	6.706e-41	154.0	COG0764@1|root,COG0764@2|Bacteria,4NUEU@976|Bacteroidetes,1IMZN@117743|Flavobacteriia,2NWQ7@237|Flavobacterium	976|Bacteroidetes	I	dehydratase	-	-	4.2.1.59	ko:K02372	ko00061,ko00780,ko01100,ko01212,map00061,map00780,map01100,map01212	M00083,M00572	R04428,R04535,R04537,R04544,R04568,R04954,R04965,R07764,R10117,R10121	RC00831,RC01095	ko00000,ko00001,ko00002,ko01000,ko01004	-	-	-	FabA
BYD3_k127_8455048_5	1202532.FF52_15627	1.214e-87	297.0	COG2207@1|root,COG2207@2|Bacteria,4NHYH@976|Bacteroidetes,1I1HG@117743|Flavobacteriia	976|Bacteroidetes	K	transcriptional regulator	-	-	-	-	-	-	-	-	-	-	-	-	HTH_18
BYD3_k127_8455048_6	1202532.FF52_15622	1.249e-85	289.0	COG0702@1|root,COG0702@2|Bacteria,4NR4S@976|Bacteroidetes,1IJ1C@117743|Flavobacteriia,2NVJ5@237|Flavobacterium	2|Bacteria	GM	NmrA-like family	-	-	-	-	-	-	-	-	-	-	-	-	NAD_binding_10
BYD3_k127_8455048_10	1298867.AUES01000022_gene2855	4.167e-24	108.0	COG1512@1|root,COG1512@2|Bacteria,1PB41@1224|Proteobacteria,2TUVD@28211|Alphaproteobacteria,3JSS7@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	TPM domain	-	-	-	ko:K06872	-	-	-	-	ko00000	-	-	-	TPM_phosphatase
BYD3_k127_8455048_11	760192.Halhy_1632	4.098e-05	46.0	2CFT1@1|root,32S2F@2|Bacteria,4NTM5@976|Bacteroidetes,1IYHT@117747|Sphingobacteriia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_8456720_3	1089547.KB913013_gene2169	1.733e-45	169.0	28HQ3@1|root,2Z7XW@2|Bacteria,4NF9H@976|Bacteroidetes,47KPJ@768503|Cytophagia	976|Bacteroidetes	S	Protein of unknown function (DUF2851)	-	-	-	-	-	-	-	-	-	-	-	-	DUF2851
BYD3_k127_8456720_4	694427.Palpr_2300	3.286e-30	124.0	COG2852@1|root,COG2852@2|Bacteria,4NUSE@976|Bacteroidetes,2FUH5@200643|Bacteroidia	976|Bacteroidetes	S	Protein of unknown function (DUF559)	-	-	-	-	-	-	-	-	-	-	-	-	DUF559
BYD3_k127_8456720_1	1237149.C900_03781	8.287e-114	376.0	COG0284@1|root,COG0284@2|Bacteria,4NE12@976|Bacteroidetes,47JHC@768503|Cytophagia	976|Bacteroidetes	F	Orotidine 5''-phosphate decarboxylase	pyrF	GO:0003674,GO:0003824,GO:0004590,GO:0006139,GO:0006206,GO:0006207,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009112,GO:0009987,GO:0016829,GO:0016830,GO:0016831,GO:0018130,GO:0019856,GO:0034641,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046112,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576	4.1.1.23	ko:K01591	ko00240,ko01100,map00240,map01100	M00051	R00965	RC00409	ko00000,ko00001,ko00002,ko01000	-	-	-	OMPdecase
BYD3_k127_8456720_2	1237149.C900_03780	1.765e-68	239.0	COG2834@1|root,COG2834@2|Bacteria,4NFGN@976|Bacteroidetes,47PRT@768503|Cytophagia	976|Bacteroidetes	M	PFAM Outer membrane lipoprotein carrier protein LolA	lolA	-	-	ko:K03634	-	-	-	-	ko00000	-	-	-	LolA,LolA_2
BYD3_k127_8456720_0	1279009.ADICEAN_03339	3.162e-311	973.0	COG1674@1|root,COG1674@2|Bacteria,4NE86@976|Bacteroidetes,47JI0@768503|Cytophagia	976|Bacteroidetes	D	DNA segregation ATPase FtsK SpoIIIE	ftsK	-	-	ko:K03466	-	-	-	-	ko00000,ko03036	3.A.12	-	-	FtsK_4TM,FtsK_SpoIIIE,Ftsk_gamma
BYD3_k127_850046_0	643867.Ftrac_2129	1.424e-224	726.0	COG1807@1|root,COG1807@2|Bacteria,4PKJX@976|Bacteroidetes,47KCA@768503|Cytophagia	976|Bacteroidetes	M	Protein of unknown function (DUF2723)	-	-	-	-	-	-	-	-	-	-	-	-	DUF2723
BYD3_k127_850046_1	649349.Lbys_3178	2.349e-50	189.0	COG5002@1|root,COG5002@2|Bacteria,4PKBV@976|Bacteroidetes,47M71@768503|Cytophagia	976|Bacteroidetes	T	Signal transduction histidine kinase	rprX	-	2.7.13.3	ko:K07636	ko02020,map02020	M00434	-	-	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	-	-	-	HATPase_c,HisKA
BYD3_k127_8525110_1	1121904.ARBP01000012_gene1271	3.697e-229	722.0	COG0438@1|root,COG0438@2|Bacteria,4PKQN@976|Bacteroidetes,47K56@768503|Cytophagia	976|Bacteroidetes	M	PFAM glycogen synthase	-	-	2.4.1.11	ko:K00693	ko00500,ko01100,ko04151,ko04152,ko04910,ko04922,ko04931,map00500,map01100,map04151,map04152,map04910,map04922,map04931	-	R00292	RC00005	ko00000,ko00001,ko01000,ko01003	-	GT3	-	Glycogen_syn
BYD3_k127_8525110_2	929562.Emtol_0722	1.764e-140	451.0	COG1082@1|root,COG1082@2|Bacteria,4NJ3Z@976|Bacteroidetes,47NJ6@768503|Cytophagia	976|Bacteroidetes	G	Xylose isomerase domain protein TIM barrel	-	-	-	-	-	-	-	-	-	-	-	-	AP_endonuc_2,TAT_signal
BYD3_k127_8525110_6	929562.Emtol_2089	1.409e-48	177.0	COG2755@1|root,COG2755@2|Bacteria,4NQAK@976|Bacteroidetes,47QQ7@768503|Cytophagia	976|Bacteroidetes	E	Stress responsive A/B Barrel Domain	-	-	-	-	-	-	-	-	-	-	-	-	Dabb
BYD3_k127_8525110_0	1122176.KB903536_gene1741	0.0	1510.0	COG0823@1|root,COG1228@1|root,COG0823@2|Bacteria,COG1228@2|Bacteria,4PM8I@976|Bacteroidetes,1IVI6@117747|Sphingobacteriia	976|Bacteroidetes	QU	Amidohydrolase family	-	-	-	-	-	-	-	-	-	-	-	-	Amidohydro_1,PD40
BYD3_k127_8525110_3	509635.N824_14525	1.78e-110	364.0	COG0101@1|root,COG0101@2|Bacteria,4NKT7@976|Bacteroidetes,1IRQ8@117747|Sphingobacteriia	976|Bacteroidetes	J	Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs	-	-	5.4.99.12	ko:K06173	-	-	-	-	ko00000,ko01000,ko03016	-	-	-	PseudoU_synth_1
BYD3_k127_8525110_4	713586.KB900536_gene1119	2.352e-62	220.0	COG0500@1|root,COG0500@2|Bacteria,1QYGH@1224|Proteobacteria	1224|Proteobacteria	Q	Methyltransferase domain	-	-	-	-	-	-	-	-	-	-	-	-	Methyltransf_25
BYD3_k127_8525110_5	616991.JPOO01000001_gene3360	1.215e-60	214.0	COG2207@1|root,COG2207@2|Bacteria,4PI6R@976|Bacteroidetes,1IG3A@117743|Flavobacteriia,23IGX@178469|Arenibacter	976|Bacteroidetes	K	helix_turn_helix, arabinose operon control protein	-	-	-	-	-	-	-	-	-	-	-	-	HTH_18
BYD3_k127_8525127_1	402777.KB235898_gene5158	3.013e-127	420.0	COG0438@1|root,COG0438@2|Bacteria,1G4NH@1117|Cyanobacteria,1H7W9@1150|Oscillatoriales	1117|Cyanobacteria	M	Glycosyl transferases group 1	-	-	-	-	-	-	-	-	-	-	-	-	Glyco_trans_1_4
BYD3_k127_8525127_0	760192.Halhy_4103	1.839e-221	698.0	COG0577@1|root,COG0577@2|Bacteria,4NDUK@976|Bacteroidetes,1INWS@117747|Sphingobacteriia	976|Bacteroidetes	V	InterPro IPR003838	-	-	-	-	-	-	-	-	-	-	-	-	FtsX,MacB_PCD
BYD3_k127_8530120_6	247156.NFA_49630	3.017e-09	59.0	COG0642@1|root,COG2205@2|Bacteria,2GM17@201174|Actinobacteria,4FUS5@85025|Nocardiaceae	201174|Actinobacteria	T	His Kinase A (phosphoacceptor) domain	mprB	GO:0000160,GO:0003674,GO:0003824,GO:0004721,GO:0005575,GO:0005576,GO:0005623,GO:0005886,GO:0006464,GO:0006468,GO:0006470,GO:0006793,GO:0006796,GO:0006807,GO:0007154,GO:0007165,GO:0008150,GO:0008152,GO:0009987,GO:0016020,GO:0016301,GO:0016310,GO:0016311,GO:0016740,GO:0016772,GO:0016787,GO:0016788,GO:0016791,GO:0018106,GO:0018193,GO:0018202,GO:0019538,GO:0023052,GO:0035556,GO:0036211,GO:0040007,GO:0042578,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044464,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0065007,GO:0071704,GO:0071944,GO:0140096,GO:1901564	2.7.13.3	ko:K07653	ko02020,map02020	M00460	-	-	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	-	-	-	HAMP,HATPase_c,HisKA
BYD3_k127_8530120_1	313606.M23134_01094	5.804e-73	252.0	COG0745@1|root,COG0745@2|Bacteria,4NH5Q@976|Bacteroidetes,47UTX@768503|Cytophagia	976|Bacteroidetes	K	Transcriptional regulatory protein, C terminal	-	-	-	-	-	-	-	-	-	-	-	-	Response_reg,Trans_reg_C
BYD3_k127_8530120_5	1296416.JACB01000026_gene3986	1.891e-31	129.0	COG1595@1|root,COG1595@2|Bacteria,4NM7R@976|Bacteroidetes,1IIVY@117743|Flavobacteriia	976|Bacteroidetes	K	Sigma-70, region 4	-	-	-	ko:K03088	-	-	-	-	ko00000,ko03021	-	-	-	Sigma70_r2,Sigma70_r4_2
BYD3_k127_8530120_2	1237149.C900_00665	7.357e-51	185.0	COG1247@1|root,COG1247@2|Bacteria,4NNGH@976|Bacteroidetes,47Q9R@768503|Cytophagia	976|Bacteroidetes	M	PFAM GCN5-related N-acetyltransferase	-	-	2.3.1.183	ko:K03823	ko00440,ko01130,map00440,map01130	-	R08871,R08938	RC00004,RC00064	ko00000,ko00001,ko01000	-	-	-	Acetyltransf_1,Acetyltransf_4
BYD3_k127_8530120_0	1124780.ANNU01000025_gene3384	1.102e-130	426.0	COG2072@1|root,COG2072@2|Bacteria,4NGC0@976|Bacteroidetes,47N3G@768503|Cytophagia	976|Bacteroidetes	P	Flavin-binding monooxygenase-like	-	-	-	-	-	-	-	-	-	-	-	-	Pyr_redox_3
BYD3_k127_8530120_4	1500281.JQKZ01000008_gene2480	6.653e-36	141.0	COG2318@1|root,COG2318@2|Bacteria,4NQEI@976|Bacteroidetes,1I2T3@117743|Flavobacteriia,3ZS40@59732|Chryseobacterium	976|Bacteroidetes	S	Protein of unknown function (DUF1572)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1572
BYD3_k127_8530120_3	717774.Marme_0760	4.657e-37	143.0	COG1028@1|root,COG1028@2|Bacteria,1MXNY@1224|Proteobacteria,1RY5U@1236|Gammaproteobacteria,1XNU0@135619|Oceanospirillales	135619|Oceanospirillales	IQ	KR domain	-	-	-	-	-	-	-	-	-	-	-	-	adh_short_C2
BYD3_k127_8532101_2	1267211.KI669560_gene521	2.858e-30	121.0	COG3000@1|root,COG3000@2|Bacteria,4NMKR@976|Bacteroidetes,1ISPG@117747|Sphingobacteriia	976|Bacteroidetes	I	Fatty acid hydroxylase superfamily	-	-	-	-	-	-	-	-	-	-	-	-	FA_hydroxylase
BYD3_k127_8532101_0	1237149.C900_02668	0.0	1092.0	COG3968@1|root,COG3968@2|Bacteria,4NG2B@976|Bacteroidetes,47KK6@768503|Cytophagia	976|Bacteroidetes	S	glutamine synthetase	glnA	-	6.3.1.2	ko:K01915	ko00220,ko00250,ko00630,ko00910,ko01100,ko01120,ko01230,ko02020,ko04217,ko04724,ko04727,map00220,map00250,map00630,map00910,map01100,map01120,map01230,map02020,map04217,map04724,map04727	-	R00253	RC00010,RC02798	ko00000,ko00001,ko01000,ko04147	-	-	-	GSIII_N,Gln-synt_C
BYD3_k127_8532101_1	1123276.KB893245_gene1636	2.626e-113	381.0	COG2234@1|root,COG2234@2|Bacteria,4NEHY@976|Bacteroidetes,47NK2@768503|Cytophagia	976|Bacteroidetes	S	Peptidase, M28	-	-	-	-	-	-	-	-	-	-	-	-	PA,Peptidase_M28
BYD3_k127_8546496_4	1408813.AYMG01000028_gene2577	6.169e-37	141.0	COG3549@1|root,COG3549@2|Bacteria,4NSZ2@976|Bacteroidetes,1J14E@117747|Sphingobacteriia	976|Bacteroidetes	S	COG3549 Plasmid maintenance system killer protein	-	-	-	ko:K07334	-	-	-	-	ko00000,ko02048	-	-	-	HigB-like_toxin
BYD3_k127_8546496_3	324925.Ppha_1377	1.023e-41	155.0	COG3093@1|root,COG3093@2|Bacteria	2|Bacteria	K	addiction module antidote protein HigA	higA	-	-	ko:K21498	-	-	-	-	ko00000,ko02048	-	-	-	HTH_3,HTH_31
BYD3_k127_8546496_2	1107311.Q767_08845	3.882e-89	299.0	COG2518@1|root,COG2518@2|Bacteria,4NMTP@976|Bacteroidetes,1I1EU@117743|Flavobacteriia,2NYPM@237|Flavobacterium	976|Bacteroidetes	J	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins	-	-	2.1.1.77	ko:K00573	-	-	-	-	ko00000,ko01000	-	-	-	PCMT
BYD3_k127_8546496_0	1341181.FLJC2902T_25260	1.398e-238	762.0	COG0421@1|root,COG0421@2|Bacteria,4NTHI@976|Bacteroidetes,1IDKX@117743|Flavobacteriia,2NYQ7@237|Flavobacterium	976|Bacteroidetes	E	Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_8546496_1	1122605.KB893648_gene3542	1.066e-117	384.0	2ECG8@1|root,336EJ@2|Bacteria,4NW0Y@976|Bacteroidetes	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_8547353_0	347834.RHE_CH01027	8.202e-165	530.0	COG1858@1|root,COG1858@2|Bacteria,1N4E1@1224|Proteobacteria,2V011@28211|Alphaproteobacteria,4BFYR@82115|Rhizobiaceae	28211|Alphaproteobacteria	P	Cytochrome c	-	-	-	-	-	-	-	-	-	-	-	-	Cytochrom_C
BYD3_k127_8547353_4	1121939.L861_17310	6.409e-64	228.0	COG3865@1|root,COG3865@2|Bacteria,1N7IY@1224|Proteobacteria,1S25M@1236|Gammaproteobacteria,1XNFA@135619|Oceanospirillales	135619|Oceanospirillales	S	3-demethylubiquinone-9 3-methyltransferase	-	-	-	-	-	-	-	-	-	-	-	-	3-dmu-9_3-mt
BYD3_k127_8547353_5	1237149.C900_00006	2.849e-31	130.0	COG3637@1|root,COG3637@2|Bacteria,4NR9K@976|Bacteroidetes,47QK5@768503|Cytophagia	976|Bacteroidetes	M	Outer membrane protein beta-barrel domain	-	-	-	-	-	-	-	-	-	-	-	-	OMP_b-brl,OMP_b-brl_2
BYD3_k127_8547353_6	700598.Niako_1135	1.428e-26	114.0	2E5XB@1|root,330M9@2|Bacteria,4NW0P@976|Bacteroidetes,1IYTT@117747|Sphingobacteriia	976|Bacteroidetes	S	Domain of unknown function (DUF4251)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4251
BYD3_k127_8547353_2	1237149.C900_00263	1.403e-105	359.0	COG1404@1|root,COG3291@1|root,COG1404@2|Bacteria,COG3291@2|Bacteria,4NGRJ@976|Bacteroidetes,47JD6@768503|Cytophagia	976|Bacteroidetes	O	PFAM Pregnancy-associated plasma protein-A	fpp2	-	-	-	-	-	-	-	-	-	-	-	Peptidase_M43
BYD3_k127_8547353_3	1237149.C900_00350	9.465e-68	241.0	COG2885@1|root,COG2885@2|Bacteria,4PIU2@976|Bacteroidetes,47SAQ@768503|Cytophagia	976|Bacteroidetes	M	Pfam:DUF3308	-	-	-	-	-	-	-	-	-	-	-	-	PorP_SprF
BYD3_k127_8547353_1	1123277.KB893200_gene6384	1.408e-123	400.0	COG4225@1|root,COG4225@2|Bacteria,4NG6C@976|Bacteroidetes,47J9H@768503|Cytophagia	976|Bacteroidetes	S	Heparinase II/III-like protein	-	-	-	-	-	-	-	-	-	-	-	-	Hepar_II_III
BYD3_k127_8549734_2	352165.HMPREF7215_1007	1.33e-22	98.0	COG1449@1|root,COG1449@2|Bacteria	2|Bacteria	G	Belongs to the glycosyl hydrolase 57 family	amyA	-	3.2.1.1	ko:K07405	ko00500,ko01100,map00500,map01100	-	R02108,R02112,R11262	-	ko00000,ko00001,ko01000	-	GH57	-	Glyco_hydro_57
BYD3_k127_8549734_1	1121373.KB903662_gene233	4.607e-114	381.0	COG0297@1|root,COG0297@2|Bacteria,4PKP8@976|Bacteroidetes,47SEI@768503|Cytophagia	976|Bacteroidetes	G	Glycosyl transferase 4-like domain	-	-	-	-	-	-	-	-	-	-	-	-	Glyco_transf_4,Glyco_transf_5,Glycos_transf_1
BYD3_k127_8549734_3	1216967.L100_01453	2.584e-20	98.0	COG0662@1|root,COG1396@1|root,COG0662@2|Bacteria,COG1396@2|Bacteria,4NN23@976|Bacteroidetes,1I1NN@117743|Flavobacteriia,34QWD@308865|Elizabethkingia	976|Bacteroidetes	K	Cupin domain	-	-	-	-	-	-	-	-	-	-	-	-	Cupin_2,HTH_19,HTH_3
BYD3_k127_8549734_0	929556.Solca_0964	0.0	1304.0	COG4206@1|root,COG4206@2|Bacteria,4PNAG@976|Bacteroidetes,1J0YU@117747|Sphingobacteriia	976|Bacteroidetes	H	Carboxypeptidase regulatory-like domain	-	-	-	-	-	-	-	-	-	-	-	-	CarbopepD_reg_2,Plug,TonB_dep_Rec
BYD3_k127_8550261_2	1279009.ADICEAN_02878	5.273e-105	353.0	COG1538@1|root,COG1538@2|Bacteria,4NE4S@976|Bacteroidetes,47KIE@768503|Cytophagia	976|Bacteroidetes	MU	PFAM Outer membrane efflux protein	-	-	-	-	-	-	-	-	-	-	-	-	OEP
BYD3_k127_8550261_4	1279009.ADICEAN_02877	1.364e-59	213.0	COG1309@1|root,COG1309@2|Bacteria,4NMR8@976|Bacteroidetes,47PFA@768503|Cytophagia	976|Bacteroidetes	K	WHG domain	-	-	-	-	-	-	-	-	-	-	-	-	TetR_N,WHG
BYD3_k127_8550261_6	111781.Lepto7376_2306	2.94e-06	52.0	2E14K@1|root,32WJQ@2|Bacteria,1G825@1117|Cyanobacteria,1HGGM@1150|Oscillatoriales	1117|Cyanobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_8550261_1	504472.Slin_2526	5.877e-133	432.0	COG2146@1|root,COG2717@1|root,COG2146@2|Bacteria,COG2717@2|Bacteria,4NJUW@976|Bacteroidetes,47TAG@768503|Cytophagia	976|Bacteroidetes	P	Ferric reductase like transmembrane component	-	-	-	-	-	-	-	-	-	-	-	-	Ferric_reduct,Rieske
BYD3_k127_8550261_5	504472.Slin_2527	8.44e-49	184.0	29EN4@1|root,301K2@2|Bacteria,4NRU9@976|Bacteroidetes,47TPC@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_8550261_3	1519464.HY22_09275	2.264e-68	239.0	COG1028@1|root,COG1028@2|Bacteria	1519464.HY22_09275|-	IQ	oxidoreductase activity, acting on CH-OH group of donors	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_8550261_0	1121904.ARBP01000002_gene6936	1.442e-200	648.0	COG0577@1|root,COG0577@2|Bacteria,4NM3D@976|Bacteroidetes,47JF6@768503|Cytophagia	976|Bacteroidetes	V	MacB-like periplasmic core domain	-	-	-	ko:K02004	-	M00258	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	FtsX,MacB_PCD
BYD3_k127_8558400_2	1288963.ADIS_4665	1.897e-15	76.0	COG2273@1|root,COG2273@2|Bacteria,4P1QX@976|Bacteroidetes	976|Bacteroidetes	G	Glycosyl hydrolases family 16	-	-	-	-	-	-	-	-	-	-	-	-	Glyco_hydro_16
BYD3_k127_8558400_1	1123276.KB893245_gene1455	1.463e-95	343.0	COG0577@1|root,COG0577@2|Bacteria,4NDUK@976|Bacteroidetes,47NTJ@768503|Cytophagia	976|Bacteroidetes	V	MacB-like periplasmic core domain	-	-	-	ko:K02004	-	M00258	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	FtsX,MacB_PCD
BYD3_k127_8558400_0	485918.Cpin_2127	9.442e-142	458.0	COG2114@1|root,COG2114@2|Bacteria,4NKWT@976|Bacteroidetes,1IV7B@117747|Sphingobacteriia	976|Bacteroidetes	T	Protein of unknown function (DUF2652)	-	-	-	-	-	-	-	-	-	-	-	-	DUF2652
BYD3_k127_8560894_1	313606.M23134_07170	6.873e-58	220.0	COG0457@1|root,COG4249@1|root,COG0457@2|Bacteria,COG4249@2|Bacteria,4NN66@976|Bacteroidetes,47Q5A@768503|Cytophagia	976|Bacteroidetes	S	Caspase domain	-	-	-	-	-	-	-	-	-	-	-	-	Peptidase_C14
BYD3_k127_8560894_3	1286632.P278_02100	8.808e-07	61.0	COG0457@1|root,COG1729@1|root,COG0457@2|Bacteria,COG1729@2|Bacteria,4NE4W@976|Bacteroidetes,1HX2D@117743|Flavobacteriia	976|Bacteroidetes	K	tetratricopeptide repeat	-	-	-	-	-	-	-	-	-	-	-	-	TPR_16,TPR_2,TPR_21,TPR_6,TPR_8
BYD3_k127_8560894_0	903818.KI912268_gene852	2.678e-62	232.0	COG2834@1|root,COG4249@1|root,COG2834@2|Bacteria,COG4249@2|Bacteria	2|Bacteria	S	B-1 B cell differentiation	lolA	-	-	ko:K03634,ko:K14166	-	-	-	-	ko00000,ko02000	-	-	-	Cadherin,LolA,PPC,Peptidase_C14
BYD3_k127_8560894_2	1237149.C900_01977	2.577e-33	132.0	COG1309@1|root,COG1309@2|Bacteria	2|Bacteria	K	transcriptional regulator	-	-	-	-	-	-	-	-	-	-	-	-	TetR_N
BYD3_k127_856243_2	1237149.C900_02035	3.328e-37	148.0	2E3RG@1|root,32YP4@2|Bacteria,4NUUF@976|Bacteroidetes,47SX9@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_856243_1	509635.N824_01120	1.179e-71	250.0	COG2207@1|root,COG2207@2|Bacteria,4NHA5@976|Bacteroidetes,1IWNM@117747|Sphingobacteriia	976|Bacteroidetes	K	helix_turn_helix, arabinose operon control protein	-	-	-	-	-	-	-	-	-	-	-	-	HTH_18
BYD3_k127_856243_0	1237149.C900_02981	8.282e-122	399.0	COG1690@1|root,COG1690@2|Bacteria,4NG8T@976|Bacteroidetes,47N9X@768503|Cytophagia	976|Bacteroidetes	S	tRNA-splicing ligase RtcB	-	-	6.5.1.3	ko:K14415	-	-	-	-	ko00000,ko01000,ko03016	-	-	-	RtcB
BYD3_k127_8603983_3	1120966.AUBU01000008_gene2529	6.119e-39	148.0	COG1629@1|root,COG4771@2|Bacteria,4NF4B@976|Bacteroidetes,47K68@768503|Cytophagia	976|Bacteroidetes	P	PFAM TonB-dependent Receptor Plug	-	-	-	-	-	-	-	-	-	-	-	-	CarbopepD_reg_2,Plug,TonB_dep_Rec
BYD3_k127_8603983_1	1120966.AUBU01000008_gene2530	2.147e-51	196.0	28I8D@1|root,32Q7B@2|Bacteria,4PBP6@976|Bacteroidetes,47W40@768503|Cytophagia	976|Bacteroidetes	S	Domain of unknown function (DUF4249)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4249
BYD3_k127_8603983_2	1305737.JAFX01000001_gene2269	2.847e-47	185.0	28I8D@1|root,32Q7B@2|Bacteria,4PBP6@976|Bacteroidetes,47W40@768503|Cytophagia	976|Bacteroidetes	S	Domain of unknown function (DUF4249)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4249
BYD3_k127_8603983_0	1123248.KB893318_gene4093	1.636e-153	491.0	COG0671@1|root,COG0671@2|Bacteria,4NF9W@976|Bacteroidetes,1IRBB@117747|Sphingobacteriia	976|Bacteroidetes	I	SPTR Phosphoesterase, PA-phosphatase related	-	-	-	-	-	-	-	-	-	-	-	-	PAP2
BYD3_k127_8606378_6	1121904.ARBP01000032_gene1994	2.011e-11	68.0	2EAD7@1|root,334H1@2|Bacteria,4PN3I@976|Bacteroidetes,47Y8Q@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_8606378_5	643867.Ftrac_3062	4.108e-24	104.0	COG2919@1|root,COG2919@2|Bacteria,4P9WW@976|Bacteroidetes,47S83@768503|Cytophagia	976|Bacteroidetes	D	Septum formation initiator	-	-	-	-	-	-	-	-	-	-	-	-	DivIC
BYD3_k127_8606378_0	1237149.C900_01066	1.501e-229	715.0	COG0148@1|root,COG0148@2|Bacteria,4NF5M@976|Bacteroidetes,47MI4@768503|Cytophagia	976|Bacteroidetes	G	Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis	eno	-	4.2.1.11	ko:K01689	ko00010,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko03018,ko04066,map00010,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map03018,map04066	M00001,M00002,M00003,M00346,M00394	R00658	RC00349	ko00000,ko00001,ko00002,ko01000,ko03019,ko04147	-	-	-	Enolase_C,Enolase_N
BYD3_k127_8606378_2	1237149.C900_01065	2.599e-175	555.0	COG0505@1|root,COG0505@2|Bacteria,4NEQI@976|Bacteroidetes,47KT4@768503|Cytophagia	976|Bacteroidetes	F	Belongs to the CarA family	carA	-	6.3.5.5	ko:K01956	ko00240,ko00250,ko01100,map00240,map00250,map01100	M00051	R00256,R00575,R01395,R10948,R10949	RC00002,RC00010,RC00043,RC02750,RC02798,RC03314	ko00000,ko00001,ko00002,ko01000	-	-	-	CPSase_sm_chain,GATase
BYD3_k127_8606378_3	929556.Solca_2999	2.182e-59	210.0	COG0203@1|root,COG0203@2|Bacteria,4NNW0@976|Bacteroidetes,1IRYB@117747|Sphingobacteriia	976|Bacteroidetes	J	Ribosomal protein L17	rplQ	GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904	-	ko:K02879	ko03010,map03010	M00178	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_L17
BYD3_k127_8606378_1	1237149.C900_01063	4.349e-184	579.0	COG0202@1|root,COG0202@2|Bacteria,4NE8W@976|Bacteroidetes,47JD5@768503|Cytophagia	976|Bacteroidetes	K	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates	rpoA	GO:0003674,GO:0003824,GO:0003899,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006351,GO:0006354,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0032774,GO:0034062,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0097659,GO:0097747,GO:0140098,GO:1901360,GO:1901362,GO:1901576	2.7.7.6	ko:K03040	ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020	M00183	R00435,R00441,R00442,R00443	RC02795	br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400	-	-	-	RNA_pol_A_CTD,RNA_pol_A_bac,RNA_pol_L
BYD3_k127_8606378_4	1237149.C900_01062	5.13e-30	119.0	COG0522@1|root,COG0522@2|Bacteria,4NEMZ@976|Bacteroidetes,47K3X@768503|Cytophagia	976|Bacteroidetes	J	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit	rpsD	GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006417,GO:0006450,GO:0008150,GO:0009889,GO:0009891,GO:0009893,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010608,GO:0010628,GO:0015935,GO:0019222,GO:0019843,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0032268,GO:0032270,GO:0032991,GO:0034248,GO:0034250,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0045727,GO:0045903,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051171,GO:0051173,GO:0051246,GO:0051247,GO:0060255,GO:0065007,GO:0065008,GO:0080090,GO:0097159,GO:1901363,GO:1990904,GO:2000112	-	ko:K02986	ko03010,map03010	M00178,M00179	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_S4,S4
BYD3_k127_8632192_4	1237149.C900_03938	1.043e-118	406.0	COG1729@1|root,COG1729@2|Bacteria,4PP99@976|Bacteroidetes,47VYS@768503|Cytophagia	976|Bacteroidetes	S	Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division	-	-	-	-	-	-	-	-	-	-	-	-	WG_beta_rep
BYD3_k127_8632192_1	1237149.C900_03939	1.79e-170	551.0	COG1524@1|root,COG1524@2|Bacteria,4NE94@976|Bacteroidetes,47JP2@768503|Cytophagia	976|Bacteroidetes	P	type I phosphodiesterase nucleotide pyrophosphatase	pafA	-	-	-	-	-	-	-	-	-	-	-	Phosphodiest
BYD3_k127_8632192_0	714943.Mucpa_1472	2.855e-226	709.0	COG0531@1|root,COG0531@2|Bacteria,4NH7J@976|Bacteroidetes,1IPWD@117747|Sphingobacteriia	976|Bacteroidetes	E	Amino acid permease	-	-	-	ko:K03294	-	-	-	-	ko00000	2.A.3.2	-	-	AA_permease_2
BYD3_k127_8632192_5	1237149.C900_03957	1.441e-108	359.0	COG1091@1|root,COG1091@2|Bacteria,4NE3K@976|Bacteroidetes,47MQV@768503|Cytophagia	976|Bacteroidetes	M	Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose	rfbD	-	1.1.1.133	ko:K00067	ko00521,ko00523,ko01130,map00521,map00523,map01130	M00793	R02777	RC00182	ko00000,ko00001,ko00002,ko01000	-	-	-	RmlD_sub_bind
BYD3_k127_8632192_7	1237149.C900_03958	2.666e-92	311.0	COG0652@1|root,COG0652@2|Bacteria,4NGT6@976|Bacteroidetes,47MY6@768503|Cytophagia	976|Bacteroidetes	O	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides	-	-	5.2.1.8	ko:K03768	-	-	-	-	ko00000,ko01000,ko03110	-	-	-	Pro_isomerase
BYD3_k127_8632192_6	313606.M23134_02149	8.426e-104	346.0	COG0181@1|root,COG0181@2|Bacteria,4NHH4@976|Bacteroidetes,47M9Y@768503|Cytophagia	976|Bacteroidetes	H	Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps	hemC	-	2.5.1.61	ko:K01749	ko00860,ko01100,ko01110,ko01120,map00860,map01100,map01110,map01120	M00121	R00084	RC02317	ko00000,ko00001,ko00002,ko01000	-	-	-	HEM4,Porphobil_deam,Porphobil_deamC
BYD3_k127_8632192_3	1237149.C900_03960	8.723e-127	416.0	COG0470@1|root,COG0470@2|Bacteria,4NEYF@976|Bacteroidetes,47XWD@768503|Cytophagia	976|Bacteroidetes	L	DNA polymerase III, delta' subunit	holB	-	2.7.7.7	ko:K02341	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	M00260	R00375,R00376,R00377,R00378	RC02795	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	-	-	-	DNA_pol3_delta2
BYD3_k127_8632192_2	1279009.ADICEAN_00602	2.628e-139	451.0	COG1207@1|root,COG1207@2|Bacteria,4NDZP@976|Bacteroidetes,47XWC@768503|Cytophagia	976|Bacteroidetes	M	Sugar nucleotidyl transferase	glmU	-	-	-	-	-	-	-	-	-	-	-	NTP_transf_4
BYD3_k127_8648112_3	1089547.KB913013_gene1185	2.508e-113	372.0	2BZ6M@1|root,2Z7HW@2|Bacteria,4NDZE@976|Bacteroidetes,47M8V@768503|Cytophagia	976|Bacteroidetes	S	Domain of Unknown Function (DUF1080)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1080
BYD3_k127_8648112_8	1121904.ARBP01000048_gene4124	2.225e-05	51.0	2E4BN@1|root,32Z79@2|Bacteria,4NXNH@976|Bacteroidetes,47VXU@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_8648112_5	483215.BACFIN_05887	8.875e-71	244.0	COG0204@1|root,COG0204@2|Bacteria,4PD5H@976|Bacteroidetes,2FPX0@200643|Bacteroidia,4AQEN@815|Bacteroidaceae	976|Bacteroidetes	I	Acyl-transferase	-	-	-	-	-	-	-	-	-	-	-	-	Acyltransferase
BYD3_k127_8648112_1	657309.BXY_35730	1.837e-145	466.0	COG4589@1|root,COG4589@2|Bacteria,4NRIQ@976|Bacteroidetes,2FR5X@200643|Bacteroidia,4AM93@815|Bacteroidaceae	976|Bacteroidetes	M	Belongs to the CDS family	-	-	2.7.7.41	ko:K00981	ko00564,ko01100,ko01110,ko04070,map00564,map01100,map01110,map04070	M00093	R01799	RC00002	ko00000,ko00001,ko00002,ko01000	-	-	-	CTP_transf_1
BYD3_k127_8648112_6	1122165.AUHS01000005_gene1699	1.725e-47	178.0	COG0558@1|root,COG0558@2|Bacteria,1RHFC@1224|Proteobacteria,1S6C6@1236|Gammaproteobacteria	1236|Gammaproteobacteria	I	Phosphatidylglycerophosphate synthase	-	-	-	-	-	-	-	-	-	-	-	-	CDP-OH_P_transf
BYD3_k127_8648112_7	1237149.C900_01572	1.156e-41	161.0	COG0526@1|root,COG0526@2|Bacteria,4NI00@976|Bacteroidetes,47QR6@768503|Cytophagia	976|Bacteroidetes	CO	Thioredoxin-like	-	-	-	-	-	-	-	-	-	-	-	-	AhpC-TSA,Redoxin
BYD3_k127_8648112_4	1237149.C900_01575	8.253e-82	273.0	2C4H4@1|root,32CX0@2|Bacteria,4NRZ7@976|Bacteroidetes,47SG5@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_8648112_0	1237149.C900_01576	1.806e-168	537.0	COG0700@1|root,COG2715@1|root,COG0700@2|Bacteria,COG2715@2|Bacteria,4NFUN@976|Bacteroidetes,47JSE@768503|Cytophagia	976|Bacteroidetes	S	PFAM Nucleoside recognition	spmA	-	-	ko:K06373	-	-	-	-	ko00000	-	-	-	Gate
BYD3_k127_865917_5	929703.KE386491_gene3655	4.605e-14	73.0	COG4980@1|root,COG4980@2|Bacteria,4NVHP@976|Bacteroidetes,47RXK@768503|Cytophagia	976|Bacteroidetes	S	YtxH-like protein	-	-	-	-	-	-	-	-	-	-	-	-	YtxH
BYD3_k127_865917_1	1237149.C900_03471	3.154e-61	216.0	2CG1Y@1|root,31EK1@2|Bacteria,4NUTU@976|Bacteroidetes,47XYM@768503|Cytophagia	976|Bacteroidetes	S	Protein of unknown function (DUF1573)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1573
BYD3_k127_865917_4	153721.MYP_4133	3.713e-28	116.0	COG1862@1|root,COG1862@2|Bacteria,4NUT4@976|Bacteroidetes,47R3A@768503|Cytophagia	976|Bacteroidetes	U	TIGRFAM preprotein translocase, YajC subunit	yajC	-	-	ko:K03210	ko02024,ko03060,ko03070,map02024,map03060,map03070	M00335	-	-	ko00000,ko00001,ko00002,ko02044	3.A.5.1,3.A.5.2	-	-	YajC
BYD3_k127_865917_3	643867.Ftrac_1918	6.841e-52	195.0	COG4856@1|root,COG4856@2|Bacteria,4NK5K@976|Bacteroidetes,47K4N@768503|Cytophagia	976|Bacteroidetes	S	YbbR-like protein	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_865917_2	1279009.ADICEAN_02626	1.558e-60	214.0	COG0237@1|root,COG0237@2|Bacteria,4NQKS@976|Bacteroidetes,47P6S@768503|Cytophagia	976|Bacteroidetes	H	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A	coaE	GO:0003674,GO:0003824,GO:0004140,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006732,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0015936,GO:0015937,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0033865,GO:0033866,GO:0033875,GO:0034030,GO:0034032,GO:0034033,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046390,GO:0046483,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576	2.7.1.24	ko:K00859	ko00770,ko01100,map00770,map01100	M00120	R00130	RC00002,RC00078	ko00000,ko00001,ko00002,ko01000	-	-	-	CoaE
BYD3_k127_865917_0	700598.Niako_2567	2.887e-78	269.0	COG0845@1|root,COG0845@2|Bacteria,4NERP@976|Bacteroidetes,1IQN0@117747|Sphingobacteriia	976|Bacteroidetes	M	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family	-	-	-	ko:K03585	ko01501,ko01503,map01501,map01503	M00646,M00647,M00699,M00718	-	-	ko00000,ko00001,ko00002,ko01504,ko02000,ko03036	2.A.6.2,8.A.1.6	-	-	HlyD_D23
BYD3_k127_866061_3	761193.Runsl_1646	2.189e-166	527.0	COG0667@1|root,COG0667@2|Bacteria,4NHA1@976|Bacteroidetes,47NMZ@768503|Cytophagia	976|Bacteroidetes	C	aldo keto reductase	-	-	-	-	-	-	-	-	-	-	-	-	Aldo_ket_red
BYD3_k127_866061_0	1237149.C900_03253	0.0	1038.0	COG0443@1|root,COG0443@2|Bacteria,4NERF@976|Bacteroidetes,47JCZ@768503|Cytophagia	976|Bacteroidetes	O	Heat shock 70 kDa protein	dnaK	-	-	ko:K04043	ko03018,ko04212,ko05152,map03018,map04212,map05152	-	-	-	ko00000,ko00001,ko03019,ko03029,ko03110,ko04147	1.A.33.1	-	-	HSP70
BYD3_k127_866061_1	504472.Slin_6131	1.338e-241	766.0	COG0823@1|root,COG1506@1|root,COG0823@2|Bacteria,COG1506@2|Bacteria,4NHS5@976|Bacteroidetes,47MWY@768503|Cytophagia	976|Bacteroidetes	EU	Peptidase S9 prolyl oligopeptidase active site domain protein	-	-	-	-	-	-	-	-	-	-	-	-	PD40,Peptidase_S9
BYD3_k127_866061_2	1237149.C900_04086	5.685e-210	678.0	COG0577@1|root,COG0577@2|Bacteria,4NDUK@976|Bacteroidetes,47JYF@768503|Cytophagia	976|Bacteroidetes	V	MacB-like periplasmic core domain	-	-	-	-	-	-	-	-	-	-	-	-	FtsX,MacB_PCD
BYD3_k127_866061_5	1150600.ADIARSV_3688	1.596e-09	60.0	2EK7X@1|root,33DY9@2|Bacteria,4NYAQ@976|Bacteroidetes,1IUER@117747|Sphingobacteriia	976|Bacteroidetes	S	Virus attachment protein p12 family	-	-	-	-	-	-	-	-	-	-	-	-	P12
BYD3_k127_866061_4	1121904.ARBP01000001_gene5817	1.98e-64	222.0	COG0535@1|root,COG0535@2|Bacteria,4NGWY@976|Bacteroidetes,47K59@768503|Cytophagia	976|Bacteroidetes	C	Radical SAM	-	-	-	-	-	-	-	-	-	-	-	-	Fer4_12,Radical_SAM,SPASM
BYD3_k127_8666642_2	471854.Dfer_3237	4.158e-143	479.0	COG0642@1|root,COG0745@1|root,COG0745@2|Bacteria,COG2205@2|Bacteria,4NFEF@976|Bacteroidetes,47N4D@768503|Cytophagia	976|Bacteroidetes	T	His Kinase A (phosphoacceptor) domain	-	-	-	-	-	-	-	-	-	-	-	-	HATPase_c,HisKA,Hpt,Response_reg
BYD3_k127_8666642_1	762903.Pedsa_3419	4.674e-159	513.0	COG2204@1|root,COG2204@2|Bacteria,4NE89@976|Bacteroidetes,1INN4@117747|Sphingobacteriia	976|Bacteroidetes	T	COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains	zraR	-	-	ko:K07713	ko02020,map02020	M00499	-	-	ko00000,ko00001,ko00002,ko02022	-	-	-	HTH_8,Response_reg,Sigma54_activat
BYD3_k127_8666642_5	1123248.KB893315_gene3216	1.22e-09	63.0	2EQES@1|root,33I0R@2|Bacteria,4NY5D@976|Bacteroidetes,1IZVC@117747|Sphingobacteriia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_8666642_4	1237149.C900_04012	1.047e-30	124.0	2DQ9W@1|root,335IW@2|Bacteria,4NX9R@976|Bacteroidetes,47SCH@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_8666642_3	1237149.C900_04011	1.613e-57	205.0	COG1595@1|root,COG1595@2|Bacteria,4NSVA@976|Bacteroidetes,47QAU@768503|Cytophagia	976|Bacteroidetes	K	TIGRFAM RNA polymerase sigma factor, sigma-70 family	-	-	-	ko:K03088	-	-	-	-	ko00000,ko03021	-	-	-	Sigma70_r2,Sigma70_r4_2
BYD3_k127_8666642_0	926549.KI421517_gene307	2.458e-238	742.0	COG0499@1|root,COG0499@2|Bacteria,4NEKE@976|Bacteroidetes,47KGI@768503|Cytophagia	976|Bacteroidetes	H	May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine	ahcY	GO:0000096,GO:0003674,GO:0003824,GO:0004013,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006520,GO:0006534,GO:0006555,GO:0006575,GO:0006725,GO:0006732,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009066,GO:0009069,GO:0009116,GO:0009119,GO:0009987,GO:0016787,GO:0016801,GO:0016802,GO:0017144,GO:0019752,GO:0033353,GO:0034641,GO:0042278,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046128,GO:0046439,GO:0046483,GO:0046498,GO:0046500,GO:0051186,GO:0055086,GO:0071704,GO:0072521,GO:1901135,GO:1901360,GO:1901564,GO:1901605,GO:1901657	3.3.1.1	ko:K01251	ko00270,ko01100,map00270,map01100	M00035	R00192,R04936	RC00056,RC00069,RC01161,RC01243	ko00000,ko00001,ko00002,ko01000,ko01009,ko04147	-	-	-	AdoHcyase,AdoHcyase_NAD
BYD3_k127_8691092_2	694427.Palpr_0110	2.079e-67	234.0	COG0617@1|root,COG0617@2|Bacteria,4NF1S@976|Bacteroidetes,2FNMZ@200643|Bacteroidia,22X29@171551|Porphyromonadaceae	976|Bacteroidetes	J	tRNA nucleotidyltransferase	cca	-	2.7.7.19,2.7.7.72	ko:K00970,ko:K00974	ko03013,ko03018,map03013,map03018	-	R09382,R09383,R09384,R09386	RC00078	ko00000,ko00001,ko01000,ko03016,ko03019	-	-	-	HD,PolyA_pol,PolyA_pol_RNAbd
BYD3_k127_8691092_0	1237149.C900_05933	1.531e-146	471.0	COG4772@1|root,COG4772@2|Bacteria,4NG13@976|Bacteroidetes,47MUX@768503|Cytophagia	976|Bacteroidetes	P	TIGRFAM Bacteroidetes-specific	-	-	-	-	-	-	-	-	-	-	-	-	PorP_SprF
BYD3_k127_8691092_1	1237149.C900_05934	1.966e-142	476.0	COG3209@1|root,COG3291@1|root,COG3405@1|root,COG3209@2|Bacteria,COG3291@2|Bacteria,COG3405@2|Bacteria,4NDZC@976|Bacteroidetes,47MNQ@768503|Cytophagia	976|Bacteroidetes	O	SprB repeat	-	-	-	-	-	-	-	-	-	-	-	-	CHU_C,PKD,SprB
BYD3_k127_8691108_1	1121904.ARBP01000004_gene1108	1.607e-161	520.0	COG0577@1|root,COG0577@2|Bacteria,4NDUK@976|Bacteroidetes,47JJN@768503|Cytophagia	976|Bacteroidetes	V	FtsX-like permease family	-	-	-	-	-	-	-	-	-	-	-	-	FtsX,MacB_PCD
BYD3_k127_8691108_0	1237149.C900_04037	9.041e-173	553.0	COG2204@1|root,COG2204@2|Bacteria,4NE89@976|Bacteroidetes,47JF9@768503|Cytophagia	976|Bacteroidetes	T	two component, sigma54 specific, transcriptional regulator, Fis family	-	-	-	-	-	-	-	-	-	-	-	-	HTH_8,Response_reg,Sigma54_activat
BYD3_k127_8691108_2	1237149.C900_04036	2.474e-119	397.0	COG5000@1|root,COG5000@2|Bacteria,4NEWF@976|Bacteroidetes,47JZG@768503|Cytophagia	976|Bacteroidetes	T	Histidine kinase	-	-	-	-	-	-	-	-	-	-	-	-	HATPase_c,PAS_8
BYD3_k127_8691108_3	1519464.HY22_14065	3.76e-20	96.0	2DDRS@1|root,2ZJ0Y@2|Bacteria	2|Bacteria	S	Protein of unknown function (DUF4230)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4230
BYD3_k127_8691546_5	991.IW20_22820	5.976e-13	77.0	COG5571@1|root,COG5571@2|Bacteria,4NMBF@976|Bacteroidetes,1I4SE@117743|Flavobacteriia,2NYG4@237|Flavobacterium	976|Bacteroidetes	N	Domain of unknown function (DUF4421)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4421
BYD3_k127_8691546_2	153721.MYP_2522	6.631e-220	690.0	COG1220@1|root,COG1220@2|Bacteria,4NFI2@976|Bacteroidetes,47JSG@768503|Cytophagia	976|Bacteroidetes	O	this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis	hslU	-	-	ko:K03667	-	-	-	-	ko00000,ko03110	-	-	-	AAA_2,ClpB_D2-small
BYD3_k127_8691546_3	1237149.C900_01123	1.107e-102	344.0	COG2067@1|root,COG2067@2|Bacteria,4NHNC@976|Bacteroidetes,47KDM@768503|Cytophagia	976|Bacteroidetes	I	penicillin-binding protein	porQ	-	-	-	-	-	-	-	-	-	-	-	PorP_SprF
BYD3_k127_8691546_0	1237149.C900_01122	0.0	1256.0	COG0466@1|root,COG0466@2|Bacteria,4NE1G@976|Bacteroidetes,47M84@768503|Cytophagia	976|Bacteroidetes	O	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner	lon	-	3.4.21.53	ko:K01338	ko04112,map04112	-	-	-	ko00000,ko00001,ko01000,ko01002	-	-	-	AAA,LON_substr_bdg,Lon_C
BYD3_k127_8691546_1	1237149.C900_01121	6.755e-256	805.0	COG2885@1|root,COG2885@2|Bacteria,4NHWF@976|Bacteroidetes,47MMG@768503|Cytophagia	976|Bacteroidetes	M	OmpA family	-	-	-	-	-	-	-	-	-	-	-	-	OmpA,PD40
BYD3_k127_8691546_6	1237149.C900_00390	8.019e-13	68.0	COG3595@1|root,COG3595@2|Bacteria,4NGRU@976|Bacteroidetes,47MSM@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	DUF4097
BYD3_k127_8697219_1	468059.AUHA01000007_gene2687	1.184e-157	503.0	COG0474@1|root,COG0474@2|Bacteria,4NERM@976|Bacteroidetes,1IR88@117747|Sphingobacteriia	976|Bacteroidetes	P	TIGRFAM ATPase, P-type, K Mg Cd Cu Zn Na Ca Na H-transporter	-	-	3.6.3.8	ko:K01537	-	-	-	-	ko00000,ko01000	3.A.3.2	-	-	Cation_ATPase_C,Cation_ATPase_N,E1-E2_ATPase,Hydrolase,Hydrolase_3
BYD3_k127_8697219_4	1237149.C900_02150	1.825e-47	176.0	COG0071@1|root,COG0071@2|Bacteria,4NQXY@976|Bacteroidetes,47R7Q@768503|Cytophagia	976|Bacteroidetes	O	Belongs to the small heat shock protein (HSP20) family	-	-	-	ko:K13993	ko04141,map04141	-	-	-	ko00000,ko00001,ko03110	-	-	-	HSP20
BYD3_k127_8697219_6	1237149.C900_03825	3.094e-27	117.0	COG3685@1|root,COG3685@2|Bacteria	2|Bacteria	S	cellular response to DNA damage stimulus	yciF	GO:0006950,GO:0006974,GO:0008150,GO:0009987,GO:0033554,GO:0050896,GO:0051716	-	-	-	-	-	-	-	-	-	-	DUF892
BYD3_k127_8697219_5	1237149.C900_03826	4.447e-42	158.0	COG3467@1|root,COG3467@2|Bacteria,4NQFR@976|Bacteroidetes,47QC8@768503|Cytophagia	976|Bacteroidetes	S	Pyridoxamine 5'-phosphate oxidase	-	-	-	ko:K07005	-	-	-	-	ko00000	-	-	-	Pyridox_ox_2
BYD3_k127_8697219_2	485918.Cpin_6595	1.969e-70	256.0	COG2989@1|root,COG2989@2|Bacteria,4NH3J@976|Bacteroidetes,1IVIF@117747|Sphingobacteriia	976|Bacteroidetes	S	L,D-transpeptidase catalytic domain	-	-	-	ko:K21470	-	-	-	-	ko00000,ko01002,ko01011	-	-	-	PG_binding_1,YkuD
BYD3_k127_8697219_3	929562.Emtol_0584	2.284e-57	203.0	COG1764@1|root,COG1764@2|Bacteria,4P9T2@976|Bacteroidetes,47S0N@768503|Cytophagia	976|Bacteroidetes	O	OsmC-like protein	-	-	-	-	-	-	-	-	-	-	-	-	OsmC
BYD3_k127_8697219_7	886377.Murru_2233	9.447e-10	65.0	2CYW5@1|root,32T50@2|Bacteria,4NS73@976|Bacteroidetes,1I3WS@117743|Flavobacteriia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_8697219_0	1288963.ADIS_4628	4.625e-283	882.0	COG0574@1|root,COG1080@1|root,COG0574@2|Bacteria,COG1080@2|Bacteria,4NEHE@976|Bacteroidetes,47JHD@768503|Cytophagia	976|Bacteroidetes	G	Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate	ppsA	-	2.7.9.2	ko:K01007	ko00620,ko00680,ko00720,ko01100,ko01120,ko01200,map00620,map00680,map00720,map01100,map01120,map01200	M00173,M00374	R00199	RC00002,RC00015	ko00000,ko00001,ko00002,ko01000	-	-	-	PEP-utilizers,PEP-utilizers_C,PPDK_N
BYD3_k127_8699073_8	66875.JODY01000017_gene500	8.529e-05	48.0	COG0152@1|root,COG0152@2|Bacteria,2GK3H@201174|Actinobacteria	201174|Actinobacteria	F	Belongs to the SAICAR synthetase family	purC	GO:0003674,GO:0003824,GO:0004639,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006163,GO:0006164,GO:0006188,GO:0006189,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0016881,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0040007,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046040,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576	6.3.2.6,6.3.4.13	ko:K01923,ko:K01945	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	M00048	R04144,R04591	RC00064,RC00090,RC00162,RC00166	ko00000,ko00001,ko00002,ko01000	-	-	-	SAICAR_synt
BYD3_k127_8699073_5	1237149.C900_01118	5.755e-161	518.0	COG0750@1|root,COG0750@2|Bacteria,4NEAR@976|Bacteroidetes,47JDH@768503|Cytophagia	976|Bacteroidetes	M	zinc metalloprotease	rseP	-	-	ko:K11749	ko02024,ko04112,map02024,map04112	-	-	-	ko00000,ko00001,ko01000,ko01002	-	-	-	PDZ,PDZ_2,Peptidase_M50
BYD3_k127_8699073_4	1237149.C900_01117	2.593e-195	614.0	COG0743@1|root,COG0743@2|Bacteria,4NG0S@976|Bacteroidetes,47K0A@768503|Cytophagia	976|Bacteroidetes	I	Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP)	dxr	GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0006081,GO:0006082,GO:0006090,GO:0006629,GO:0006644,GO:0006720,GO:0006721,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0008654,GO:0009058,GO:0009240,GO:0009987,GO:0016114,GO:0016491,GO:0016614,GO:0016616,GO:0019288,GO:0019637,GO:0019682,GO:0019752,GO:0030145,GO:0030604,GO:0032787,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0046490,GO:0046872,GO:0046914,GO:0048037,GO:0050661,GO:0050662,GO:0051483,GO:0051484,GO:0055114,GO:0070402,GO:0071704,GO:0090407,GO:0097159,GO:1901135,GO:1901265,GO:1901363,GO:1901576	1.1.1.267	ko:K00099	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	M00096	R05688	RC01452	ko00000,ko00001,ko00002,ko01000	-	-	-	DXPR_C,DXP_redisom_C,DXP_reductoisom
BYD3_k127_8699073_2	643867.Ftrac_2873	1.403e-242	758.0	COG0318@1|root,COG0318@2|Bacteria,4NDYR@976|Bacteroidetes,47JUW@768503|Cytophagia	976|Bacteroidetes	IQ	PFAM GH3 auxin-responsive promoter	-	-	-	-	-	-	-	-	-	-	-	-	GH3
BYD3_k127_8699073_6	1237149.C900_01113	2.829e-133	441.0	COG0265@1|root,COG0265@2|Bacteria	2|Bacteria	O	serine-type endopeptidase activity	degQ	-	3.4.21.107	ko:K04771	ko01503,ko02020,map01503,map02020	M00728	-	-	ko00000,ko00001,ko00002,ko01000,ko01002,ko03110	-	-	-	PDZ_2,Trypsin_2
BYD3_k127_8699073_3	1237149.C900_00732	1.114e-203	644.0	COG0593@1|root,COG0593@2|Bacteria,4NE6Q@976|Bacteroidetes,47KR6@768503|Cytophagia	976|Bacteroidetes	L	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids	dnaA	GO:0003674,GO:0003676,GO:0003677,GO:0003688,GO:0003690,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006270,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0016020,GO:0034641,GO:0034645,GO:0043170,GO:0043565,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0071944,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901576,GO:1990837	-	ko:K02313	ko02020,ko04112,map02020,map04112	-	-	-	ko00000,ko00001,ko03032,ko03036	-	-	-	Bac_DnaA,Bac_DnaA_C,DnaA_N
BYD3_k127_8699073_7	1237149.C900_00733	2.302e-57	214.0	COG1884@1|root,COG1884@2|Bacteria,4NDVE@976|Bacteroidetes,47JP5@768503|Cytophagia	976|Bacteroidetes	I	Methylmalonyl-CoA mutase N-terminal domain subunit	mutA	-	5.4.99.2	ko:K01847	ko00280,ko00630,ko00640,ko00720,ko01100,ko01120,ko01200,map00280,map00630,map00640,map00720,map01100,map01120,map01200	M00373,M00376,M00741	R00833	RC00395	ko00000,ko00001,ko00002,ko01000	-	-	-	MM_CoA_mutase
BYD3_k127_8699073_0	1237149.C900_00734	0.0	1067.0	COG2185@1|root,COG2185@2|Bacteria,4NFS0@976|Bacteroidetes,47JW5@768503|Cytophagia	976|Bacteroidetes	I	Methylmalonyl-CoA mutase	mutB	-	5.4.99.2	ko:K01847	ko00280,ko00630,ko00640,ko00720,ko01100,ko01120,ko01200,map00280,map00630,map00640,map00720,map01100,map01120,map01200	M00373,M00376,M00741	R00833	RC00395	ko00000,ko00001,ko00002,ko01000	-	-	-	B12-binding,MM_CoA_mutase
BYD3_k127_8699073_1	1237149.C900_00735	7.639e-307	972.0	COG0457@1|root,COG4995@1|root,COG0457@2|Bacteria,COG4995@2|Bacteria,4NKPZ@976|Bacteroidetes,47N11@768503|Cytophagia	976|Bacteroidetes	S	CHAT domain	-	-	-	-	-	-	-	-	-	-	-	-	CHAT,TPR_10,TPR_12
BYD3_k127_8700721_5	1237149.C900_00306	3.73e-16	80.0	COG4980@1|root,COG4980@2|Bacteria,4NXMW@976|Bacteroidetes,47SQV@768503|Cytophagia	976|Bacteroidetes	S	YtxH-like protein	-	-	-	-	-	-	-	-	-	-	-	-	YtxH
BYD3_k127_8700721_2	1048983.EL17_09875	4.873e-97	327.0	COG2187@1|root,COG2187@2|Bacteria,4NKD3@976|Bacteroidetes,47PG2@768503|Cytophagia	976|Bacteroidetes	S	Protein conserved in bacteria	-	-	-	ko:K07028	-	-	-	-	ko00000	-	-	-	AAA_33
BYD3_k127_8700721_3	1123057.P872_13630	3.554e-36	143.0	COG0645@1|root,COG0645@2|Bacteria,4NSKU@976|Bacteroidetes,47RG0@768503|Cytophagia	976|Bacteroidetes	S	Chromatin associated protein KTI12	-	-	-	-	-	-	-	-	-	-	-	-	AAA_33
BYD3_k127_8700721_4	1237149.C900_01974	3.295e-22	102.0	2A813@1|root,30X1F@2|Bacteria,4NP0A@976|Bacteroidetes	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_8700721_1	1237149.C900_00304	5.775e-294	914.0	COG0465@1|root,COG0465@2|Bacteria,4NF0E@976|Bacteroidetes,47KKF@768503|Cytophagia	976|Bacteroidetes	O	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins	ftsH	-	-	ko:K03798	-	M00742	-	-	ko00000,ko00002,ko01000,ko01002,ko03110	-	-	-	AAA,FtsH_ext,Peptidase_M41
BYD3_k127_8700721_7	485917.Phep_1451	6.928e-06	55.0	COG0782@1|root,COG0782@2|Bacteria,4NQAD@976|Bacteroidetes,1ITI1@117747|Sphingobacteriia	976|Bacteroidetes	K	Transcription elongation factor	-	-	-	-	-	-	-	-	-	-	-	-	GreA_GreB
BYD3_k127_8700721_0	1237149.C900_00302	9.539e-299	923.0	COG0366@1|root,COG0366@2|Bacteria,4NEXF@976|Bacteroidetes,47K6X@768503|Cytophagia	976|Bacteroidetes	G	Alpha amylase, catalytic domain	-	-	3.2.1.1	ko:K01176	ko00500,ko01100,ko04973,map00500,map01100,map04973	-	R02108,R02112,R11262	-	ko00000,ko00001,ko01000	-	GH13	-	Alpha-amylase,CBM26
BYD3_k127_8700721_6	1123248.KB893386_gene1935	1.132e-08	58.0	2C852@1|root,32YB2@2|Bacteria,4NM63@976|Bacteroidetes,1IX0W@117747|Sphingobacteriia	976|Bacteroidetes	S	Domain of unknown function (DUF4136)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4136
BYD3_k127_8709533_2	1233951.IO90_13550	2.538e-12	68.0	2E2E1@1|root,32XIR@2|Bacteria,4NUDT@976|Bacteroidetes,1IAY1@117743|Flavobacteriia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_8709533_0	641524.ADICYQ_5458	7.018e-140	451.0	COG3622@1|root,COG3622@2|Bacteria,4NG74@976|Bacteroidetes,47K7Z@768503|Cytophagia	976|Bacteroidetes	G	PFAM Xylose isomerase-like TIM barrel	-	-	5.3.1.22	ko:K01816	ko00630,ko01100,map00630,map01100	-	R01394	RC00511	ko00000,ko00001,ko01000	-	-	-	AP_endonuc_2
BYD3_k127_8709533_1	1123248.KB893381_gene962	7.469e-134	447.0	COG1413@1|root,COG2010@1|root,COG2133@1|root,COG1413@2|Bacteria,COG2010@2|Bacteria,COG2133@2|Bacteria,4P2AE@976|Bacteroidetes	976|Bacteroidetes	C	E-Z type HEAT repeats	-	-	-	-	-	-	-	-	-	-	-	-	Cytochrom_C,HEAT_2
BYD3_k127_8710993_0	485918.Cpin_0637	3.028e-318	1000.0	COG0308@1|root,COG0308@2|Bacteria,4NGUB@976|Bacteroidetes,1IQZU@117747|Sphingobacteriia	976|Bacteroidetes	E	Peptidase M1	-	-	-	-	-	-	-	-	-	-	-	-	CarbopepD_reg_2,Peptidase_M1
BYD3_k127_8710993_1	1123277.KB893178_gene2682	1.368e-44	176.0	COG2207@1|root,COG2207@2|Bacteria,4NJQX@976|Bacteroidetes,47JZV@768503|Cytophagia	976|Bacteroidetes	K	helix_turn_helix, arabinose operon control protein	-	-	-	-	-	-	-	-	-	-	-	-	HTH_18
BYD3_k127_8725409_2	1107311.Q767_09070	2.742e-58	205.0	COG0346@1|root,COG0346@2|Bacteria,4P53A@976|Bacteroidetes	976|Bacteroidetes	E	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily	-	-	-	-	-	-	-	-	-	-	-	-	Glyoxalase
BYD3_k127_8725409_3	204669.Acid345_4007	1.792e-25	109.0	2CK96@1|root,3346F@2|Bacteria,3Y5N2@57723|Acidobacteria,2JJZD@204432|Acidobacteriia	204432|Acidobacteriia	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_8725409_0	504472.Slin_5085	0.0	1258.0	COG0376@1|root,COG0376@2|Bacteria,4NG30@976|Bacteroidetes,47KR2@768503|Cytophagia	976|Bacteroidetes	P	Bifunctional enzyme with both catalase and broad- spectrum peroxidase activity	katG	-	1.11.1.21	ko:K03782	ko00360,ko00380,ko00940,ko00983,ko01100,ko01110,map00360,map00380,map00940,map00983,map01100,map01110	-	R00602,R00698,R02596,R02670,R03919,R04007,R07443,R11906	RC00034,RC00213,RC00767,RC02141	ko00000,ko00001,ko01000	-	-	-	peroxidase
BYD3_k127_8725409_1	929562.Emtol_1590	6.854e-142	461.0	COG0477@1|root,COG2814@2|Bacteria,4NI75@976|Bacteroidetes,47T95@768503|Cytophagia	976|Bacteroidetes	EGP	Uncharacterised MFS-type transporter YbfB	-	-	-	-	-	-	-	-	-	-	-	-	MFS_1,MFS_4
BYD3_k127_8736263_2	929703.KE386492_gene4269	9.411e-112	368.0	COG0657@1|root,COG0657@2|Bacteria,4NIQ0@976|Bacteroidetes,47JK6@768503|Cytophagia	976|Bacteroidetes	I	alpha/beta hydrolase fold	-	-	-	-	-	-	-	-	-	-	-	-	Abhydrolase_3,Peptidase_S9
BYD3_k127_8736263_3	1239962.C943_03723	2.732e-105	347.0	COG0668@1|root,COG0668@2|Bacteria,4NEPW@976|Bacteroidetes,47MG7@768503|Cytophagia	976|Bacteroidetes	M	PFAM Mechanosensitive ion channel	-	-	-	ko:K03442,ko:K16052	-	-	-	-	ko00000,ko02000	1.A.23.2,1.A.23.4	-	-	MS_channel,TM_helix
BYD3_k127_8736263_1	1123248.KB893359_gene2154	1.777e-118	385.0	COG0726@1|root,COG0726@2|Bacteria,4NJK7@976|Bacteroidetes	976|Bacteroidetes	G	PFAM Polysaccharide deacetylase	-	-	-	-	-	-	-	-	-	-	-	-	Polysacc_deac_1
BYD3_k127_8736263_0	1123248.KB893359_gene2156	0.0	1230.0	COG1413@1|root,COG2133@1|root,COG3474@1|root,COG1413@2|Bacteria,COG2133@2|Bacteria,COG3474@2|Bacteria,4NGAU@976|Bacteroidetes,1IWXQ@117747|Sphingobacteriia	976|Bacteroidetes	CG	Membrane-bound dehydrogenase domain	-	-	-	-	-	-	-	-	-	-	-	-	Cytochrom_C
BYD3_k127_8736263_4	1040983.AXAE01000004_gene736	1.168e-44	180.0	COG2730@1|root,COG2730@2|Bacteria,1R544@1224|Proteobacteria,2U1MT@28211|Alphaproteobacteria,43NR5@69277|Phyllobacteriaceae	28211|Alphaproteobacteria	G	Protein of unknown function (DUF4038)	-	-	-	-	-	-	-	-	-	-	-	-	Collagen_bind_2,DUF4038
BYD3_k127_8739139_3	1121481.AUAS01000008_gene3003	2.118e-81	280.0	COG3525@1|root,COG3525@2|Bacteria,4NE08@976|Bacteroidetes,47JFD@768503|Cytophagia	976|Bacteroidetes	G	PFAM Glycoside hydrolase, family 20, catalytic core	-	-	3.2.1.52	ko:K12373	ko00511,ko00513,ko00520,ko00531,ko00603,ko00604,ko01100,ko04142,map00511,map00513,map00520,map00531,map00603,map00604,map01100,map04142	M00079	R00022,R06004,R11316	RC00049	ko00000,ko00001,ko00002,ko01000,ko03110	-	GH20	-	CHB_HEX,CHB_HEX_C,Glyco_hydro_20,Glyco_hydro_20b
BYD3_k127_8739139_2	1121904.ARBP01000043_gene2122	1.091e-169	539.0	COG4299@1|root,COG4299@2|Bacteria,4NDZF@976|Bacteroidetes,47JVV@768503|Cytophagia	976|Bacteroidetes	S	Protein of unknown function (DUF1624)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1624,DUF5009
BYD3_k127_8739139_1	616991.JPOO01000003_gene805	9.118e-313	973.0	COG3292@1|root,COG3292@2|Bacteria,4NE4U@976|Bacteroidetes,1HZAU@117743|Flavobacteriia,23G4T@178469|Arenibacter	976|Bacteroidetes	T	Two component regulator propeller	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_8739139_0	504472.Slin_6608	1.032e-319	994.0	COG3292@1|root,COG3292@2|Bacteria,4NF9I@976|Bacteroidetes,47MWU@768503|Cytophagia	976|Bacteroidetes	T	Two component regulator propeller	-	-	-	-	-	-	-	-	-	-	-	-	Reg_prop
BYD3_k127_8739139_5	1121481.AUAS01000005_gene1896	6.376e-28	115.0	COG2388@1|root,COG2388@2|Bacteria,4NWXW@976|Bacteroidetes,47T23@768503|Cytophagia	976|Bacteroidetes	S	GCN5-related N-acetyl-transferase	-	-	-	ko:K06975	-	-	-	-	ko00000	-	-	-	Acetyltransf_CG
BYD3_k127_8739139_7	153721.MYP_3314	3.421e-24	118.0	COG3291@1|root,COG5492@1|root,COG3291@2|Bacteria,COG5492@2|Bacteria,4NGEP@976|Bacteroidetes,47NK0@768503|Cytophagia	976|Bacteroidetes	M	C-terminal domain of CHU protein family	-	-	-	-	-	-	-	-	-	-	-	-	CHU_C
BYD3_k127_8739139_6	926562.Oweho_2322	1.949e-25	122.0	COG1409@1|root,COG1524@1|root,COG3291@1|root,COG1409@2|Bacteria,COG1524@2|Bacteria,COG3291@2|Bacteria,4PI18@976|Bacteroidetes,1IGEB@117743|Flavobacteriia,2PBHZ@246874|Cryomorphaceae	976|Bacteroidetes	N	Concanavalin A-like lectin/glucanases superfamily	-	-	-	-	-	-	-	-	-	-	-	-	Laminin_G_3
BYD3_k127_8739139_4	661478.OP10G_2523	5.572e-29	124.0	COG2203@1|root,COG4251@1|root,COG5002@1|root,COG2203@2|Bacteria,COG4251@2|Bacteria,COG5002@2|Bacteria	2|Bacteria	T	protein histidine kinase activity	-	-	2.7.13.1	ko:K05962	-	-	-	-	ko00000,ko01000	-	-	-	CHASE3,GAF_2,HATPase_c,HisKA,PAS,PAS_3,PAS_4,PAS_9,SpoIIE
BYD3_k127_8739803_0	1237149.C900_05611	2.753e-218	685.0	COG1164@1|root,COG1164@2|Bacteria,4NFYH@976|Bacteroidetes,47JSX@768503|Cytophagia	976|Bacteroidetes	E	PFAM peptidase M3A and M3B thimet oligopeptidase F	pepF	-	-	ko:K08602	-	-	-	-	ko00000,ko01000,ko01002	-	-	-	Peptidase_M3,Peptidase_M3_N
BYD3_k127_8739803_7	153721.MYP_3695	5.092e-10	67.0	COG4103@1|root,COG4103@2|Bacteria,4NUAN@976|Bacteroidetes,47R5X@768503|Cytophagia	976|Bacteroidetes	S	Tellurite resistance protein TerB	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_8739803_6	926549.KI421517_gene783	2.238e-11	65.0	COG2133@1|root,COG2133@2|Bacteria,4NDV1@976|Bacteroidetes,47MB2@768503|Cytophagia	976|Bacteroidetes	G	Glucose / Sorbosone dehydrogenase	-	-	-	-	-	-	-	-	-	-	-	-	GSDH
BYD3_k127_8739803_8	1120951.AUBG01000001_gene811	1.996e-08	57.0	COG2133@1|root,COG2133@2|Bacteria,4NDV1@976|Bacteroidetes,1I8ID@117743|Flavobacteriia	976|Bacteroidetes	G	Glucose / Sorbosone dehydrogenase	-	-	-	-	-	-	-	-	-	-	-	-	GSDH
BYD3_k127_8739803_3	1121904.ARBP01000011_gene1467	5.882e-61	222.0	COG4977@1|root,COG4977@2|Bacteria,4PMD8@976|Bacteroidetes,47Q18@768503|Cytophagia	976|Bacteroidetes	K	helix_turn_helix, arabinose operon control protein	-	-	-	ko:K07506	-	-	-	-	ko00000,ko03000	-	-	-	HTH_18
BYD3_k127_8739803_1	1123248.KB893348_gene332	7.795e-165	526.0	COG0116@1|root,COG0116@2|Bacteria,4NFJM@976|Bacteroidetes,1IQEJ@117747|Sphingobacteriia	976|Bacteroidetes	L	Belongs to the methyltransferase superfamily	ypsC	-	-	ko:K07444	-	-	-	-	ko00000,ko01000	-	-	-	THUMP,UPF0020
BYD3_k127_8739803_2	1237149.C900_05719	1.129e-64	229.0	COG0340@1|root,COG0340@2|Bacteria,4NHCH@976|Bacteroidetes,47MUP@768503|Cytophagia	976|Bacteroidetes	H	PFAM Biotin lipoate A B protein ligase	birA	-	6.3.4.15	ko:K03524	ko00780,ko01100,map00780,map01100	-	R01074,R05145	RC00043,RC00070,RC00096,RC02896	ko00000,ko00001,ko01000,ko03000	-	-	-	BPL_LplA_LipB
BYD3_k127_8739803_4	1237149.C900_05720	4.368e-52	186.0	COG0799@1|root,COG0799@2|Bacteria,4NSKK@976|Bacteroidetes,47Q9C@768503|Cytophagia	976|Bacteroidetes	S	Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation	rsfS	-	-	ko:K09710	-	-	-	-	ko00000,ko03009	-	-	-	RsfS
BYD3_k127_8739803_5	1237149.C900_05721	4.369e-20	92.0	COG0465@1|root,COG0465@2|Bacteria,4NF0E@976|Bacteroidetes,47KKF@768503|Cytophagia	976|Bacteroidetes	O	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins	ftsH	-	-	ko:K03798	-	M00742	-	-	ko00000,ko00002,ko01000,ko01002,ko03110	-	-	-	AAA,FtsH_ext,Peptidase_M41
BYD3_k127_874496_1	929556.Solca_2910	8.39e-91	304.0	COG3279@1|root,COG3279@2|Bacteria,4NI3K@976|Bacteroidetes,1J04E@117747|Sphingobacteriia	976|Bacteroidetes	K	Response regulator of the LytR AlgR family	-	-	-	-	-	-	-	-	-	-	-	-	LytTR,Response_reg
BYD3_k127_874496_2	925409.KI911562_gene968	2.659e-78	274.0	COG2972@1|root,COG2972@2|Bacteria,4NHM5@976|Bacteroidetes,1IRRM@117747|Sphingobacteriia	976|Bacteroidetes	T	PFAM histidine kinase	-	-	-	-	-	-	-	-	-	-	-	-	HATPase_c_5,His_kinase
BYD3_k127_874496_0	1121890.AUDO01000008_gene2705	1.176e-100	339.0	COG3055@1|root,COG3055@2|Bacteria,4NG50@976|Bacteroidetes,1HY2Q@117743|Flavobacteriia,2NTYA@237|Flavobacterium	976|Bacteroidetes	S	Galactose oxidase, central domain	nanM	-	-	-	-	-	-	-	-	-	-	-	Kelch_1,Kelch_3,Kelch_4,Kelch_6
BYD3_k127_8759126_1	1237149.C900_03672	8.492e-93	307.0	COG1595@1|root,COG1595@2|Bacteria,4NIRG@976|Bacteroidetes,47JCE@768503|Cytophagia	976|Bacteroidetes	K	Belongs to the sigma-70 factor family. ECF subfamily	-	-	-	ko:K03088	-	-	-	-	ko00000,ko03021	-	-	-	Sigma70_r2,Sigma70_r4_2
BYD3_k127_8759126_0	504472.Slin_3512	1.18e-146	473.0	COG1680@1|root,COG1680@2|Bacteria,4NI1Z@976|Bacteroidetes,47NWH@768503|Cytophagia	976|Bacteroidetes	V	Beta-lactamase	pbpE	-	-	-	-	-	-	-	-	-	-	-	Beta-lactamase,DUF3471
BYD3_k127_8759126_2	1279009.ADICEAN_01691	3.47e-85	286.0	COG0357@1|root,COG0357@2|Bacteria,4NEJG@976|Bacteroidetes,47KEA@768503|Cytophagia	976|Bacteroidetes	J	Specifically methylates the N7 position of a guanine in 16S rRNA	rsmG	GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016435,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0036265,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0070043,GO:0070475,GO:0070476,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360	2.1.1.170	ko:K03501	-	-	-	-	ko00000,ko01000,ko03009,ko03036	-	-	-	GidB
BYD3_k127_8759126_3	643867.Ftrac_3621	1.908e-20	94.0	28K2C@1|root,2Z9RQ@2|Bacteria,4NJP3@976|Bacteroidetes,47N7B@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	Phenol_MetA_deg
BYD3_k127_8760901_2	1123277.KB893228_gene2047	7.265e-78	266.0	COG3279@1|root,COG3279@2|Bacteria,4NIXU@976|Bacteroidetes,47KNT@768503|Cytophagia	976|Bacteroidetes	KT	LytTr DNA-binding domain	-	-	-	-	-	-	-	-	-	-	-	-	LytTR,Response_reg
BYD3_k127_8760901_3	1317122.ATO12_02640	3.204e-73	260.0	COG2972@1|root,COG2972@2|Bacteria,4NMDQ@976|Bacteroidetes,1I1GC@117743|Flavobacteriia	976|Bacteroidetes	T	Histidine kinase	-	-	-	-	-	-	-	-	-	-	-	-	His_kinase
BYD3_k127_8760901_1	1434325.AZQN01000001_gene14	4.123e-124	407.0	COG3669@1|root,COG3669@2|Bacteria,4NEDX@976|Bacteroidetes,47JNA@768503|Cytophagia	976|Bacteroidetes	G	Coagulation factor 5 8 type domain protein	-	-	3.2.1.51	ko:K01206	ko00511,map00511	-	-	-	ko00000,ko00001,ko01000,ko04147	-	GH29	-	Alpha_L_fucos,F5_F8_type_C
BYD3_k127_8760901_5	1279009.ADICEAN_00477	1.346e-65	238.0	COG3063@1|root,COG3063@2|Bacteria	2|Bacteria	NU	photosynthesis	-	-	-	ko:K20543	-	-	-	-	ko00000,ko02000	1.B.55.3	-	-	BCSC_C,DUF560,TPR_16,TPR_19,TPR_8
BYD3_k127_8760901_8	1123248.KB893370_gene5153	1.837e-41	154.0	COG1359@1|root,COG1359@2|Bacteria,4P3Z8@976|Bacteroidetes	976|Bacteroidetes	S	(4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase activity	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_8760901_7	1237149.C900_01969	3.022e-45	174.0	COG3291@1|root,COG3291@2|Bacteria,4NV3K@976|Bacteroidetes,47W7K@768503|Cytophagia	976|Bacteroidetes	C	Pkd domain containing protein	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_8760901_0	1286632.P278_16540	6.511e-182	583.0	COG2032@1|root,COG2032@2|Bacteria,4NGGW@976|Bacteroidetes,1HY8P@117743|Flavobacteriia	976|Bacteroidetes	P	superoxide dismutase activity	-	-	-	-	-	-	-	-	-	-	-	-	CHRD
BYD3_k127_8760901_9	1185876.BN8_06573	6.952e-29	132.0	COG3266@1|root,COG3266@2|Bacteria,4NKN6@976|Bacteroidetes,47NWQ@768503|Cytophagia	976|Bacteroidetes	S	domain, Protein	-	-	-	-	-	-	-	-	-	-	-	-	OMP_b-brl,OMP_b-brl_2
BYD3_k127_8760901_6	471854.Dfer_4134	4.156e-56	201.0	COG1595@1|root,COG1595@2|Bacteria,4NKHT@976|Bacteroidetes,47P68@768503|Cytophagia	976|Bacteroidetes	K	TIGRFAM RNA polymerase sigma factor, sigma-70 family	-	-	-	ko:K03088	-	-	-	-	ko00000,ko03021	-	-	-	Sigma70_r2,Sigma70_r4_2
BYD3_k127_8760901_4	700598.Niako_4003	2.835e-68	234.0	COG2329@1|root,COG2329@2|Bacteria,4NQGS@976|Bacteroidetes,1IYGS@117747|Sphingobacteriia	976|Bacteroidetes	S	Domain of unknown function (DUF3291)	-	-	-	-	-	-	-	-	-	-	-	-	DUF3291
BYD3_k127_8764598_3	700598.Niako_4381	8.039e-127	410.0	COG2957@1|root,COG2957@2|Bacteria,4NGF8@976|Bacteroidetes,1IP6F@117747|Sphingobacteriia	976|Bacteroidetes	E	Belongs to the agmatine deiminase family	aguA	-	3.5.3.12	ko:K10536	ko00330,ko01100,map00330,map01100	-	R01416	RC00177	ko00000,ko00001,ko01000	-	-	-	PAD_porph
BYD3_k127_8764598_2	485918.Cpin_3938	5.732e-166	524.0	COG0388@1|root,COG0388@2|Bacteria,4NEME@976|Bacteroidetes,1IPIY@117747|Sphingobacteriia	976|Bacteroidetes	S	PFAM Nitrilase cyanide hydratase and apolipoprotein N-acyltransferase	pabB	-	3.5.1.53,3.5.1.6	ko:K01431,ko:K12251	ko00240,ko00330,ko00410,ko00770,ko00983,ko01100,map00240,map00330,map00410,map00770,map00983,map01100	M00046	R00905,R01152,R04666,R08228	RC00096	ko00000,ko00001,ko00002,ko01000	-	-	-	CN_hydrolase
BYD3_k127_8764598_1	1237149.C900_01764	4.042e-217	683.0	COG0493@1|root,COG0493@2|Bacteria,4NG9R@976|Bacteroidetes,47M2V@768503|Cytophagia	976|Bacteroidetes	E	TIGRFAM glutamate synthases, NADH NADPH, small subunit	gltD	-	1.4.1.13,1.4.1.14	ko:K00266	ko00250,ko00910,ko01100,ko01110,ko01120,ko01130,ko01230,map00250,map00910,map01100,map01110,map01120,map01130,map01230	-	R00093,R00114,R00248	RC00006,RC00010,RC02799	ko00000,ko00001,ko01000	-	-	-	Fer4_20,Pyr_redox_2
BYD3_k127_8764598_0	1237149.C900_01765	0.0	2008.0	COG0067@1|root,COG0069@1|root,COG0070@1|root,COG0067@2|Bacteria,COG0069@2|Bacteria,COG0070@2|Bacteria,4NFKH@976|Bacteroidetes,47JB7@768503|Cytophagia	976|Bacteroidetes	E	glutamate synthase	gltB	-	1.4.1.13,1.4.1.14,1.4.7.1	ko:K00265,ko:K00284	ko00250,ko00630,ko00910,ko01100,ko01110,ko01120,ko01130,ko01230,map00250,map00630,map00910,map01100,map01110,map01120,map01130,map01230	-	R00021,R00093,R00114,R00248,R10086	RC00006,RC00010,RC02799	ko00000,ko00001,ko01000	-	-	-	GATase_2,GXGXG,Glu_syn_central,Glu_synthase
BYD3_k127_8778293_8	1396418.BATQ01000154_gene1020	1.693e-52	194.0	COG0398@1|root,COG0398@2|Bacteria,46Z4H@74201|Verrucomicrobia,2IUX8@203494|Verrucomicrobiae	203494|Verrucomicrobiae	S	SNARE associated Golgi protein	-	-	-	-	-	-	-	-	-	-	-	-	SNARE_assoc
BYD3_k127_8778293_0	1232410.KI421426_gene1503	0.0	1550.0	COG3408@1|root,COG3408@2|Bacteria,1QUN2@1224|Proteobacteria,42PYS@68525|delta/epsilon subdivisions,2WMEG@28221|Deltaproteobacteria,43UGD@69541|Desulfuromonadales	28221|Deltaproteobacteria	G	Glycogen debranching enzyme	-	-	-	-	-	-	-	-	-	-	-	-	Glyco_hydro_63
BYD3_k127_8778293_5	1403819.BATR01000007_gene229	4.152e-60	211.0	COG3871@1|root,COG3871@2|Bacteria,46VIW@74201|Verrucomicrobia,2IVPR@203494|Verrucomicrobiae	203494|Verrucomicrobiae	S	Pyridoxamine 5'-phosphate oxidase like	-	-	-	-	-	-	-	-	-	-	-	-	Pyrid_ox_like
BYD3_k127_8778293_1	762903.Pedsa_1933	4.393e-200	636.0	COG0531@1|root,COG0531@2|Bacteria,4NDU2@976|Bacteroidetes,1IPK3@117747|Sphingobacteriia	976|Bacteroidetes	E	amino acid	-	-	-	ko:K03294	-	-	-	-	ko00000	2.A.3.2	-	-	AA_permease_2
BYD3_k127_8778293_2	760192.Halhy_0330	2.153e-95	321.0	COG0811@1|root,COG0811@2|Bacteria,4NE8M@976|Bacteroidetes,1INP5@117747|Sphingobacteriia	976|Bacteroidetes	U	PFAM MotA TolQ ExbB proton channel	exbB	-	-	ko:K03561	-	-	-	-	ko00000,ko02000	1.A.30.2.1	-	-	MotA_ExbB
BYD3_k127_8778293_4	926549.KI421517_gene377	4.671e-62	219.0	COG0848@1|root,COG0848@2|Bacteria,4NMT4@976|Bacteroidetes,47NTX@768503|Cytophagia	976|Bacteroidetes	U	PFAM Biopolymer transport protein ExbD TolR	exbD1	-	-	-	-	-	-	-	-	-	-	-	ExbD
BYD3_k127_8778293_9	926549.KI421517_gene378	3.413e-49	180.0	COG0848@1|root,COG0848@2|Bacteria,4NMQ8@976|Bacteroidetes,47Q1Y@768503|Cytophagia	976|Bacteroidetes	U	PFAM Biopolymer transport protein ExbD TolR	exbD2	-	-	-	-	-	-	-	-	-	-	-	ExbD
BYD3_k127_8778293_6	929556.Solca_3744	9.37e-57	207.0	COG0810@1|root,COG0810@2|Bacteria,4NFH6@976|Bacteroidetes,1ISCX@117747|Sphingobacteriia	976|Bacteroidetes	U	Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins	tonB2	-	-	ko:K03832	-	-	-	-	ko00000,ko02000	2.C.1.1	-	-	TonB_C
BYD3_k127_8778293_3	929556.Solca_3742	1.236e-72	256.0	COG0226@1|root,COG0226@2|Bacteria,4NH1N@976|Bacteroidetes,1IRT8@117747|Sphingobacteriia	976|Bacteroidetes	P	ABC-type phosphate transport system periplasmic	-	-	-	ko:K02040	ko02010,ko02020,ko05152,map02010,map02020,map05152	M00222	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.7	-	-	PBP_like_2
BYD3_k127_8778293_7	509635.N824_12855	1.704e-55	211.0	COG0457@1|root,COG3063@1|root,COG0457@2|Bacteria,COG3063@2|Bacteria,4NIEU@976|Bacteroidetes,1IUS1@117747|Sphingobacteriia	976|Bacteroidetes	NU	Tetratricopeptide repeats	-	-	-	-	-	-	-	-	-	-	-	-	TPR_16,TPR_19,TPR_2,TPR_8
BYD3_k127_8782463_4	929704.Myrod_3214	0.0001363	53.0	2ABZD@1|root,311GW@2|Bacteria,4PGAH@976|Bacteroidetes,1I6UK@117743|Flavobacteriia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_8782463_1	344747.PM8797T_31038	4.704e-92	310.0	COG0657@1|root,COG0657@2|Bacteria	2|Bacteria	I	acetylesterase activity	-	-	-	-	-	-	-	-	-	-	-	-	Abhydrolase_3,F5_F8_type_C
BYD3_k127_8782463_2	1122176.KB903540_gene33	2.327e-71	247.0	2ABP6@1|root,31153@2|Bacteria,4NQ16@976|Bacteroidetes	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_8782463_3	1202532.FF52_19875	7.303e-24	105.0	COG0745@1|root,COG0745@2|Bacteria,4NXE8@976|Bacteroidetes,1IIY7@117743|Flavobacteriia,2NWJG@237|Flavobacterium	976|Bacteroidetes	T	cheY-homologous receiver domain	-	-	-	-	-	-	-	-	-	-	-	-	Response_reg
BYD3_k127_8782463_0	1121011.AUCB01000011_gene1780	2.967e-109	364.0	COG3829@1|root,COG4251@1|root,COG3829@2|Bacteria,COG4251@2|Bacteria,4NE3J@976|Bacteroidetes,1HXNX@117743|Flavobacteriia,23G9Z@178469|Arenibacter	976|Bacteroidetes	T	PAS domain	-	-	-	-	-	-	-	-	-	-	-	-	HATPase_c,HisKA,PAS_3,PAS_4,PAS_9
BYD3_k127_8800510_0	1121904.ARBP01000004_gene1108	4.18e-168	539.0	COG0577@1|root,COG0577@2|Bacteria,4NDUK@976|Bacteroidetes,47JJN@768503|Cytophagia	976|Bacteroidetes	V	FtsX-like permease family	-	-	-	-	-	-	-	-	-	-	-	-	FtsX,MacB_PCD
BYD3_k127_8800510_4	391587.KAOT1_02276	3.046e-05	49.0	COG1961@1|root,COG1961@2|Bacteria,4NFJA@976|Bacteroidetes,1HZSJ@117743|Flavobacteriia	976|Bacteroidetes	L	COG1961 Site-specific recombinases, DNA invertase Pin homologs	-	-	-	-	-	-	-	-	-	-	-	-	Recombinase,Resolvase
BYD3_k127_8800510_1	471854.Dfer_1275	1.073e-111	370.0	COG3781@1|root,COG3781@2|Bacteria,4NGJ0@976|Bacteroidetes,47M3V@768503|Cytophagia	976|Bacteroidetes	S	Bestrophin, RFP-TM, chloride channel	-	-	-	ko:K08994	-	-	-	-	ko00000,ko02000	1.A.46.2	-	-	Bestrophin
BYD3_k127_8800510_2	485917.Phep_1339	4.22e-92	310.0	COG1028@1|root,COG1028@2|Bacteria,4NHDB@976|Bacteroidetes,1INQP@117747|Sphingobacteriia	976|Bacteroidetes	IQ	Short-chain dehydrogenase reductase SDR	-	-	-	-	-	-	-	-	-	-	-	-	adh_short_C2
BYD3_k127_8800510_3	1449065.JMLL01000010_gene27	3.341e-21	97.0	2DGV1@1|root,2ZXD8@2|Bacteria,1QI77@1224|Proteobacteria,2UZSN@28211|Alphaproteobacteria,43QDQ@69277|Phyllobacteriaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_880990_3	616991.JPOO01000003_gene1433	7.799e-38	153.0	COG3712@1|root,COG3712@2|Bacteria,4NH8I@976|Bacteroidetes,1HXP7@117743|Flavobacteriia,23GZA@178469|Arenibacter	976|Bacteroidetes	PT	FecR protein	-	-	-	-	-	-	-	-	-	-	-	-	DUF4974,FecR
BYD3_k127_880990_2	1121904.ARBP01000012_gene1353	2.195e-40	157.0	COG1595@1|root,COG1595@2|Bacteria,4PIX2@976|Bacteroidetes,47W42@768503|Cytophagia	976|Bacteroidetes	K	ECF sigma factor	-	-	-	-	-	-	-	-	-	-	-	-	Sigma70_r4_2
BYD3_k127_880990_0	1237149.C900_04937	1.296e-117	385.0	COG0584@1|root,COG0584@2|Bacteria,4NGI1@976|Bacteroidetes,47MFN@768503|Cytophagia	976|Bacteroidetes	C	PFAM Glycerophosphoryl diester phosphodiesterase	glpQ	-	3.1.4.46	ko:K01126	ko00564,map00564	-	R01030,R01470	RC00017,RC00425	ko00000,ko00001,ko01000	-	-	-	GDPD,Phytase-like
BYD3_k127_880990_1	1237149.C900_04938	2.033e-91	308.0	COG0524@1|root,COG0524@2|Bacteria,4NIHI@976|Bacteroidetes,47NUW@768503|Cytophagia	976|Bacteroidetes	G	Belongs to the carbohydrate kinase PfkB family	-	-	-	-	-	-	-	-	-	-	-	-	PfkB
BYD3_k127_8814039_5	504472.Slin_4628	5.857e-12	70.0	COG0577@1|root,COG0577@2|Bacteria,4NDUK@976|Bacteroidetes,47NS5@768503|Cytophagia	976|Bacteroidetes	V	MacB-like periplasmic core domain	-	-	-	ko:K02004	-	M00258	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	FtsX,MacB_PCD
BYD3_k127_8814039_2	504472.Slin_1944	2.367e-299	925.0	COG2272@1|root,COG2272@2|Bacteria,4NG5B@976|Bacteroidetes,47UCC@768503|Cytophagia	976|Bacteroidetes	I	Carboxylesterase family	-	-	-	ko:K03929	-	-	-	-	ko00000,ko01000	-	CE10	-	COesterase
BYD3_k127_8814039_1	1123276.KB893247_gene199	0.0	1229.0	COG3408@1|root,COG3408@2|Bacteria,4NHHR@976|Bacteroidetes,47MK4@768503|Cytophagia	976|Bacteroidetes	G	Bacterial alpha-L-rhamnosidase C-terminal domain	-	-	-	-	-	-	-	-	-	-	-	-	Bac_rhamnosid,Bac_rhamnosid6H,Bac_rhamnosid_C,Bac_rhamnosid_N
BYD3_k127_8814039_4	1408813.AYMG01000031_gene1495	3.133e-169	547.0	COG0702@1|root,COG0702@2|Bacteria,4NEDB@976|Bacteroidetes	976|Bacteroidetes	GM	PFAM RagB SusD	-	-	-	ko:K21572	-	-	-	-	ko00000,ko02000	8.A.46.1,8.A.46.3	-	-	SusD-like_3,SusD_RagB
BYD3_k127_8814039_0	313596.RB2501_00906	0.0	1263.0	COG1629@1|root,COG4771@2|Bacteria,4P1Z5@976|Bacteroidetes,1I04A@117743|Flavobacteriia	976|Bacteroidetes	P	Outer membrane receptor	-	-	-	-	-	-	-	-	-	-	-	-	CarbopepD_reg_2,Plug,STN,TonB_dep_Rec
BYD3_k127_8814039_3	1123248.KB893315_gene2947	2.793e-253	794.0	COG3250@1|root,COG3250@2|Bacteria,4NFE8@976|Bacteroidetes,1IPWK@117747|Sphingobacteriia	976|Bacteroidetes	G	Glycoside hydrolase, family 2	-	-	-	-	-	-	-	-	-	-	-	-	F5_F8_type_C,Glyco_hydro_106,Glyco_hydro_2_N
BYD3_k127_8832763_0	1121904.ARBP01000013_gene426	4.104e-310	972.0	COG0577@1|root,COG0577@2|Bacteria,4NDUK@976|Bacteroidetes,47NE2@768503|Cytophagia	976|Bacteroidetes	V	MacB-like periplasmic core domain	-	-	-	-	-	-	-	-	-	-	-	-	FtsX,MacB_PCD
BYD3_k127_8832763_1	1121904.ARBP01000030_gene1963	1.282e-43	160.0	COG1695@1|root,COG1695@2|Bacteria,4NUDG@976|Bacteroidetes	976|Bacteroidetes	K	Transcriptional regulator PadR-like family	-	-	-	-	-	-	-	-	-	-	-	-	PadR
BYD3_k127_8861962_10	1150600.ADIARSV_1422	8.065e-13	78.0	2DQVC@1|root,338X2@2|Bacteria,4NW3I@976|Bacteroidetes,1IU51@117747|Sphingobacteriia	976|Bacteroidetes	S	CHAD domain	-	-	-	-	-	-	-	-	-	-	-	-	CHAD
BYD3_k127_8861962_11	485918.Cpin_2572	5.384e-06	49.0	COG1961@1|root,COG1961@2|Bacteria,4NFJA@976|Bacteroidetes,1IW8Y@117747|Sphingobacteriia	976|Bacteroidetes	L	resolvase domain protein	-	-	-	-	-	-	-	-	-	-	-	-	Recombinase,Resolvase,Zn_ribbon_recom
BYD3_k127_8861962_3	1122179.KB890491_gene4476	7.224e-103	342.0	COG3637@1|root,COG3637@2|Bacteria,4NE33@976|Bacteroidetes,1IR93@117747|Sphingobacteriia	976|Bacteroidetes	M	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_8861962_7	1121904.ARBP01000011_gene1424	2.339e-51	187.0	COG2353@1|root,COG2353@2|Bacteria,4NSJH@976|Bacteroidetes,47QHY@768503|Cytophagia	976|Bacteroidetes	S	Belongs to the UPF0312 family	-	-	-	-	-	-	-	-	-	-	-	-	YceI
BYD3_k127_8861962_9	1279009.ADICEAN_02967	1.432e-44	172.0	COG2010@1|root,COG3291@1|root,COG2010@2|Bacteria,COG3291@2|Bacteria,4NV3K@976|Bacteroidetes,47W7K@768503|Cytophagia	976|Bacteroidetes	C	Pkd domain containing protein	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_8861962_6	456442.Mboo_1505	2.9e-60	218.0	COG4315@1|root,arCOG08235@2157|Archaea,2Y0R7@28890|Euryarchaeota	28890|Euryarchaeota	C	Secreted repeat of unknown function	-	-	-	-	-	-	-	-	-	-	-	-	Lipoprotein_15
BYD3_k127_8861962_1	1237149.C900_00281	1.983e-151	497.0	COG0457@1|root,COG0457@2|Bacteria,4NGS0@976|Bacteroidetes,47MD8@768503|Cytophagia	976|Bacteroidetes	K	Tetratricopeptide repeat	-	-	-	-	-	-	-	-	-	-	-	-	TPR_12,TPR_8
BYD3_k127_8861962_8	643867.Ftrac_3659	5.756e-51	184.0	COG1959@1|root,COG1959@2|Bacteria,4NNN2@976|Bacteroidetes,47P8M@768503|Cytophagia	976|Bacteroidetes	K	TIGRFAM Transcriptional regulator, Rrf2	cymR	-	-	-	-	-	-	-	-	-	-	-	Rrf2
BYD3_k127_8861962_2	1124780.ANNU01000033_gene1296	1.503e-110	360.0	COG0450@1|root,COG0450@2|Bacteria,4NEZZ@976|Bacteroidetes,47KEE@768503|Cytophagia	976|Bacteroidetes	O	PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen	-	-	1.11.1.15	ko:K03386	ko04214,map04214	-	-	-	ko00000,ko00001,ko01000,ko04147	-	-	-	1-cysPrx_C,AhpC-TSA
BYD3_k127_8861962_4	761193.Runsl_1632	8.768e-81	282.0	COG0845@1|root,COG0845@2|Bacteria,4NITE@976|Bacteroidetes,47MHD@768503|Cytophagia	976|Bacteroidetes	M	Efflux transporter, RND family, MFP subunit	-	-	-	-	-	-	-	-	-	-	-	-	Biotin_lipoyl_2,HlyD_3,HlyD_D23
BYD3_k127_8861962_0	1239962.C943_01435	7.338e-171	545.0	COG4591@1|root,COG4591@2|Bacteria,4NHBR@976|Bacteroidetes,47MB4@768503|Cytophagia	976|Bacteroidetes	M	COGs COG4591 ABC-type transport system involved in lipoprotein release permease component	lolC	-	-	ko:K09808	ko02010,map02010	M00255	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.125	-	-	FtsX,MacB_PCD
BYD3_k127_8861962_5	1185876.BN8_01502	8.936e-61	213.0	COG1136@1|root,COG1136@2|Bacteria,4NFCG@976|Bacteroidetes,47KXC@768503|Cytophagia	976|Bacteroidetes	V	Part of the ABC transporter complex LolCDE involved in the translocation of	-	-	-	ko:K09810	ko02010,map02010	M00255	-	-	ko00000,ko00001,ko00002,ko01000,ko02000	3.A.1.125	-	-	ABC_tran
BYD3_k127_8883306_1	1279009.ADICEAN_02148	1.47e-44	169.0	COG3047@1|root,COG3047@2|Bacteria,4NSNH@976|Bacteroidetes,47R79@768503|Cytophagia	976|Bacteroidetes	M	Outer membrane protein beta-barrel domain	-	-	-	-	-	-	-	-	-	-	-	-	OMP_b-brl,OMP_b-brl_2
BYD3_k127_8883306_2	1270193.JARP01000007_gene320	9.154e-31	124.0	2A9IE@1|root,30YQS@2|Bacteria,4PCMJ@976|Bacteroidetes,1IBV6@117743|Flavobacteriia,2NXI3@237|Flavobacterium	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_8883306_0	1123248.KB893370_gene5050	6.061e-199	629.0	COG2010@1|root,COG2133@1|root,COG2010@2|Bacteria,COG2133@2|Bacteria,4NEZC@976|Bacteroidetes,1IPYV@117747|Sphingobacteriia	976|Bacteroidetes	G	Glucose / Sorbosone dehydrogenase	-	-	-	ko:K21430	-	-	-	-	ko00000,ko01000	-	-	-	Cytochrome_CBB3,GSDH
BYD3_k127_8883306_3	1121904.ARBP01000002_gene7268	6.202e-25	110.0	2BZCX@1|root,33XUD@2|Bacteria,4P3BB@976|Bacteroidetes,47V4G@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_8884732_2	485918.Cpin_6871	4.869e-29	119.0	COG0389@1|root,COG0389@2|Bacteria,4NE9N@976|Bacteroidetes,1INW1@117747|Sphingobacteriia	976|Bacteroidetes	L	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII	dinB	-	2.7.7.7	ko:K02346	-	-	-	-	ko00000,ko01000,ko03400	-	-	-	IMS,IMS_C,IMS_HHH
BYD3_k127_8884732_5	1121898.Q766_19895	2.025e-09	65.0	COG1514@1|root,COG1514@2|Bacteria,4PCEA@976|Bacteroidetes,1ID8T@117743|Flavobacteriia,2NXR1@237|Flavobacterium	976|Bacteroidetes	J	2'-5' RNA ligase superfamily	-	-	-	-	-	-	-	-	-	-	-	-	2_5_RNA_ligase2
BYD3_k127_8884732_1	489825.LYNGBM3L_55820	1.557e-156	520.0	COG0514@1|root,COG0514@2|Bacteria,1G1Y1@1117|Cyanobacteria,1H7RZ@1150|Oscillatoriales	1117|Cyanobacteria	L	DNA helicase	recQ	-	3.6.4.12	ko:K03654	ko03018,map03018	-	-	-	ko00000,ko00001,ko01000,ko03400	-	-	-	DEAD,HRDC,HTH_40,Helicase_C,RQC,RecQ_Zn_bind
BYD3_k127_8884732_0	385682.AFSL01000009_gene2441	3.668e-318	1003.0	COG0587@1|root,COG0587@2|Bacteria,4NE2R@976|Bacteroidetes,2FW95@200643|Bacteroidia,3XIXS@558415|Marinilabiliaceae	976|Bacteroidetes	L	DNA polymerase alpha chain like domain	-	-	2.7.7.7	ko:K02337	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	M00260	R00375,R00376,R00377,R00378	RC02795	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	-	-	-	DNA_pol3_alpha,HHH_6,PHP
BYD3_k127_8884732_3	1237149.C900_02649	6.593e-13	71.0	COG1277@1|root,COG1277@2|Bacteria,4NEES@976|Bacteroidetes,47WZW@768503|Cytophagia	976|Bacteroidetes	S	Excinuclease ABC subunit B	-	-	-	-	-	-	-	-	-	-	-	-	ABC2_membrane_2,ABC2_membrane_4
BYD3_k127_8891984_2	376686.Fjoh_2319	5.365e-20	91.0	COG3237@1|root,COG3237@2|Bacteria,4NUMZ@976|Bacteroidetes,1I57R@117743|Flavobacteriia,2NXG5@237|Flavobacterium	976|Bacteroidetes	S	Belongs to the UPF0337 (CsbD) family	-	-	-	-	-	-	-	-	-	-	-	-	CsbD
BYD3_k127_8891984_0	929562.Emtol_1427	3.215e-296	930.0	COG0474@1|root,COG0474@2|Bacteria,4NERM@976|Bacteroidetes,47JYI@768503|Cytophagia	976|Bacteroidetes	P	ATPase, P-type (transporting), HAD superfamily, subfamily IC	-	-	3.6.3.8	ko:K01537	-	-	-	-	ko00000,ko01000	3.A.3.2	-	-	Cation_ATPase_C,Cation_ATPase_N,E1-E2_ATPase,Hydrolase
BYD3_k127_8891984_1	1237149.C900_02152	1.643e-148	481.0	COG0524@1|root,COG0524@2|Bacteria,4NV59@976|Bacteroidetes,47VXK@768503|Cytophagia	976|Bacteroidetes	G	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_8891984_3	1237149.C900_02153	2.409e-17	86.0	COG1544@1|root,COG1544@2|Bacteria	2|Bacteria	J	regulation of translation	hpf	-	-	ko:K03733,ko:K05808,ko:K05809	-	-	-	-	ko00000,ko03009,ko03036	-	-	-	Ribosom_S30AE_C,Ribosomal_S30AE
BYD3_k127_8891984_4	1305737.JAFX01000001_gene166	6.616e-17	87.0	COG0782@1|root,COG0782@2|Bacteria,4NQVP@976|Bacteroidetes	976|Bacteroidetes	K	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus	-	-	-	-	-	-	-	-	-	-	-	-	GreA_GreB
BYD3_k127_8894240_1	1237149.C900_04427	6.908e-70	243.0	COG0577@1|root,COG0577@2|Bacteria,4NDUK@976|Bacteroidetes,47UBY@768503|Cytophagia	976|Bacteroidetes	V	MacB-like periplasmic core domain	-	-	-	ko:K02004	-	M00258	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	FtsX,MacB_PCD
BYD3_k127_8894240_0	471854.Dfer_0140	2.005e-206	665.0	COG0577@1|root,COG0577@2|Bacteria,4NDUK@976|Bacteroidetes,47NTJ@768503|Cytophagia	976|Bacteroidetes	V	MacB-like periplasmic core domain	-	-	-	ko:K02004	-	M00258	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	FtsX,MacB_PCD
BYD3_k127_8908559_3	1158294.JOMI01000007_gene291	7.044e-43	160.0	COG1629@1|root,COG1629@2|Bacteria,4NDXS@976|Bacteroidetes,2FM2D@200643|Bacteroidia	976|Bacteroidetes	P	TonB-linked outer membrane protein, SusC RagA family	-	-	-	-	-	-	-	-	-	-	-	-	CarbopepD_reg_2,Plug,TonB_dep_Rec
BYD3_k127_8908559_2	1123248.KB893348_gene178	3.657e-208	662.0	COG1435@1|root,COG1435@2|Bacteria,4NE0A@976|Bacteroidetes,1IQAB@117747|Sphingobacteriia	976|Bacteroidetes	F	PFAM RagB SusD	-	-	-	ko:K21572	-	-	-	-	ko00000,ko02000	8.A.46.1,8.A.46.3	-	-	SusD-like_3,SusD_RagB
BYD3_k127_8908559_0	1189612.A33Q_3407	0.0	1257.0	COG4888@1|root,COG4888@2|Bacteria,4NEE8@976|Bacteroidetes,47JJ5@768503|Cytophagia	976|Bacteroidetes	S	ASPIC and UnbV	-	-	-	-	-	-	-	-	-	-	-	-	UnbV_ASPIC,VCBS
BYD3_k127_8908559_1	1392488.JHZY01000002_gene579	0.0	1069.0	COG4888@1|root,COG4888@2|Bacteria,4NEE8@976|Bacteroidetes,1HX4C@117743|Flavobacteriia,2XJ0R@283735|Leeuwenhoekiella	976|Bacteroidetes	S	ASPIC and UnbV	-	-	-	-	-	-	-	-	-	-	-	-	UnbV_ASPIC,VCBS
BYD3_k127_8915844_3	1237149.C900_03182	7.799e-46	171.0	COG1472@1|root,COG1472@2|Bacteria,4NET8@976|Bacteroidetes,47P5P@768503|Cytophagia	976|Bacteroidetes	G	Glycosyl hydrolase family 3 N terminal domain	-	-	3.2.1.52	ko:K01207	ko00520,ko00531,ko01100,ko01501,map00520,map00531,map01100,map01501	M00628	R00022,R05963,R07809,R07810,R10831	RC00049	ko00000,ko00001,ko00002,ko01000	-	-	-	Glyco_hydro_3
BYD3_k127_8915844_0	929562.Emtol_2314	2.458e-120	400.0	COG2027@1|root,COG2027@2|Bacteria,4NGIQ@976|Bacteroidetes,47JKB@768503|Cytophagia	976|Bacteroidetes	M	PFAM D-Ala-D-Ala carboxypeptidase 3 (S13) family	dacB	-	3.4.16.4	ko:K07259	ko00550,map00550	-	-	-	ko00000,ko00001,ko01000,ko01002,ko01011	-	-	-	Peptidase_S13
BYD3_k127_8915844_2	1237149.C900_03184	2.189e-58	207.0	COG2318@1|root,COG2318@2|Bacteria,4NQBY@976|Bacteroidetes,47PR7@768503|Cytophagia	976|Bacteroidetes	S	DinB superfamily	-	-	-	-	-	-	-	-	-	-	-	-	DinB_2
BYD3_k127_8915844_4	1237149.C900_00757	6.646e-29	120.0	COG2202@1|root,COG4251@1|root,COG2202@2|Bacteria,COG4251@2|Bacteria	2|Bacteria	T	photoreceptor activity	-	-	-	-	-	-	-	-	-	-	-	-	HATPase_c,HisKA,PAS,PAS_3,PAS_4,PAS_9,Response_reg,Y_Y_Y
BYD3_k127_8915844_1	1237149.C900_01523	7.916e-83	284.0	28IIU@1|root,2Z8JV@2|Bacteria,4NEFH@976|Bacteroidetes,47JU3@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_8915844_5	1237149.C900_01522	2.947e-12	69.0	COG3292@1|root,COG3292@2|Bacteria,4NNTX@976|Bacteroidetes,47U09@768503|Cytophagia	976|Bacteroidetes	T	Y_Y_Y domain	-	-	-	-	-	-	-	-	-	-	-	-	Y_Y_Y
BYD3_k127_8924807_7	1121904.ARBP01000009_gene4328	2.38e-46	187.0	COG4219@1|root,COG4219@2|Bacteria,4NKKC@976|Bacteroidetes,47JQV@768503|Cytophagia	976|Bacteroidetes	KT	PFAM Peptidase M56, BlaR1	-	-	-	-	-	-	-	-	-	-	-	-	Peptidase_M56
BYD3_k127_8924807_1	1237149.C900_05679	5.149e-139	450.0	COG4948@1|root,COG4948@2|Bacteria,4NEBX@976|Bacteroidetes,47N8Q@768503|Cytophagia	976|Bacteroidetes	M	mandelate racemase muconate lactonizing	-	-	-	-	-	-	-	-	-	-	-	-	MR_MLE_C,MR_MLE_N
BYD3_k127_8924807_2	1121904.ARBP01000007_gene3097	3.325e-129	422.0	COG3367@1|root,COG3367@2|Bacteria,4NGXN@976|Bacteroidetes,47NP1@768503|Cytophagia	976|Bacteroidetes	S	Domain of unknown function (DUF1611_N) Rossmann-like domain	-	-	-	-	-	-	-	-	-	-	-	-	DUF1611,DUF1611_N
BYD3_k127_8924807_0	1239962.C943_00368	4.225e-174	551.0	COG0820@1|root,COG0820@2|Bacteria,4NFH5@976|Bacteroidetes,47KHN@768503|Cytophagia	976|Bacteroidetes	J	Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs	rlmN	GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0006139,GO:0006364,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016740,GO:0016741,GO:0022613,GO:0030488,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0070475,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140101,GO:0140102,GO:1901360	2.1.1.192	ko:K06941	-	-	-	-	ko00000,ko01000,ko03009	-	-	-	Fer4_14,Radical_SAM
BYD3_k127_8924807_8	743722.Sph21_4543	0.0003849	51.0	COG1629@1|root,COG4771@2|Bacteria,4NDU8@976|Bacteroidetes,1IQWB@117747|Sphingobacteriia	976|Bacteroidetes	P	TonB-dependent receptor plug	-	-	-	-	-	-	-	-	-	-	-	-	CarbopepD_reg_2,Plug,TonB_dep_Rec
BYD3_k127_8924807_5	1124780.ANNU01000061_gene910	1.026e-75	263.0	COG0596@1|root,COG0596@2|Bacteria,4NFBJ@976|Bacteroidetes,47P83@768503|Cytophagia	976|Bacteroidetes	S	Alpha/beta hydrolase family	-	-	3.8.1.5	ko:K01563,ko:K22318	ko00361,ko00625,ko01100,ko01120,map00361,map00625,map01100,map01120	-	R05284,R05367,R05368,R05369,R05370,R07669,R07670	RC01317,RC01340,RC01341,RC02013	ko00000,ko00001,ko01000	-	-	-	Abhydrolase_1
BYD3_k127_8924807_3	1237149.C900_00704	7.577e-112	368.0	COG0705@1|root,COG0705@2|Bacteria,4NGVJ@976|Bacteroidetes,47JAM@768503|Cytophagia	976|Bacteroidetes	S	PFAM Rhomboid family	-	-	-	-	-	-	-	-	-	-	-	-	Rhomboid
BYD3_k127_8924807_6	1237149.C900_00705	9.121e-52	189.0	COG0705@1|root,COG0705@2|Bacteria,4NIYR@976|Bacteroidetes,47PBZ@768503|Cytophagia	976|Bacteroidetes	S	PFAM Rhomboid family	-	-	3.4.21.105	ko:K09650	-	-	-	-	ko00000,ko01000,ko01002,ko03029	-	-	-	Rhomboid
BYD3_k127_8924807_4	1237149.C900_00706	9.248e-108	357.0	COG0323@1|root,COG0323@2|Bacteria,4NDWJ@976|Bacteroidetes,47KZU@768503|Cytophagia	976|Bacteroidetes	L	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex	mutL	GO:0003674,GO:0003676,GO:0003677,GO:0003697,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0032300,GO:0032991,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1990391	-	ko:K03572	ko03430,map03430	-	-	-	ko00000,ko00001,ko03400	-	-	-	DNA_mis_repair,HATPase_c_3,MutL_C
BYD3_k127_8931601_1	1237149.C900_02617	9.224e-191	601.0	COG0626@1|root,COG0626@2|Bacteria,4NF0Q@976|Bacteroidetes,47JY2@768503|Cytophagia	976|Bacteroidetes	E	PFAM Cys Met metabolism PLP-dependent enzyme	metC	-	2.5.1.48,4.4.1.1,4.4.1.8	ko:K01739,ko:K01758,ko:K01760	ko00260,ko00270,ko00450,ko00920,ko01100,ko01110,ko01130,ko01230,map00260,map00270,map00450,map00920,map01100,map01110,map01130,map01230	M00017,M00338	R00782,R00999,R01001,R01286,R01288,R02408,R02508,R03217,R03260,R04770,R04930,R04941,R04944,R04945,R04946,R09366	RC00020,RC00056,RC00069,RC00348,RC00382,RC00420,RC00488,RC00710,RC01209,RC01210,RC01245,RC02303,RC02848,RC02866	ko00000,ko00001,ko00002,ko01000,ko04147	-	-	-	Cys_Met_Meta_PP
BYD3_k127_8931601_6	869213.JCM21142_41883	1.538e-45	174.0	COG0666@1|root,COG4704@1|root,COG0666@2|Bacteria,COG4704@2|Bacteria,4NUMP@976|Bacteroidetes,47SYD@768503|Cytophagia	976|Bacteroidetes	S	Fibrobacter succinogenes major domain (Fib_succ_major)	-	-	-	-	-	-	-	-	-	-	-	-	BACON,Fib_succ_major
BYD3_k127_8931601_0	1237149.C900_04816	5.376e-240	790.0	COG0745@1|root,COG3292@1|root,COG5002@1|root,COG0745@2|Bacteria,COG3292@2|Bacteria,COG5002@2|Bacteria,4P0IA@976|Bacteroidetes,47TR0@768503|Cytophagia	976|Bacteroidetes	T	Y_Y_Y domain	-	-	-	-	-	-	-	-	-	-	-	-	HATPase_c,HTH_18,HisKA,Response_reg,Y_Y_Y
BYD3_k127_8931601_2	926549.KI421517_gene109	5.311e-166	531.0	COG0477@1|root,COG2814@2|Bacteria,4NEQU@976|Bacteroidetes,47KKT@768503|Cytophagia	976|Bacteroidetes	EGP	Major facilitator superfamily MFS_1	-	-	-	-	-	-	-	-	-	-	-	-	MFS_1
BYD3_k127_8931601_3	1237149.C900_02616	1.683e-150	499.0	COG0457@1|root,COG0642@1|root,COG0457@2|Bacteria,COG2205@2|Bacteria,4NQHU@976|Bacteroidetes,47R06@768503|Cytophagia	976|Bacteroidetes	T	His Kinase A (phosphoacceptor) domain	-	-	-	-	-	-	-	-	-	-	-	-	HATPase_c,HisKA,TPR_12,TPR_8
BYD3_k127_8931601_7	671143.DAMO_0166	1.845e-13	74.0	2EIBB@1|root,33C2R@2|Bacteria	2|Bacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_8931601_8	1236959.BAMT01000009_gene3378	2.32e-07	53.0	2EGMT@1|root,31BJK@2|Bacteria,1Q7EI@1224|Proteobacteria,2VZ0N@28216|Betaproteobacteria,2KN8J@206350|Nitrosomonadales	206350|Nitrosomonadales	S	Phospholipase_D-nuclease N-terminal	-	-	-	-	-	-	-	-	-	-	-	-	PLDc_N
BYD3_k127_8931601_5	1237149.C900_02612	1.174e-105	351.0	COG1360@1|root,COG1360@2|Bacteria,4NGHP@976|Bacteroidetes,47NTZ@768503|Cytophagia	976|Bacteroidetes	N	OmpA family	-	-	-	ko:K02557	ko02030,ko02040,map02030,map02040	-	-	-	ko00000,ko00001,ko02000,ko02035	1.A.30.1	-	-	MotB_plug,OmpA
BYD3_k127_8931601_4	1237149.C900_02611	5.8e-149	475.0	COG1028@1|root,COG1028@2|Bacteria,4NE45@976|Bacteroidetes,47JX5@768503|Cytophagia	976|Bacteroidetes	IQ	Short-chain dehydrogenase reductase SDR	ykuF	-	-	ko:K13774	ko00281,map00281	-	R08087,R08096,R10125,R10126	RC00080,RC00087	ko00000,ko00001	-	-	-	adh_short_C2
BYD3_k127_8931601_9	1237149.C900_03388	3.319e-06	56.0	COG0457@1|root,COG0642@1|root,COG0457@2|Bacteria,COG2205@2|Bacteria,4NQHU@976|Bacteroidetes,47R06@768503|Cytophagia	1237149.C900_03388|-	T	His Kinase A (phosphoacceptor) domain	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_8939311_5	1313421.JHBV01000042_gene3338	1.511e-31	143.0	COG2885@1|root,COG5010@1|root,COG2885@2|Bacteria,COG5010@2|Bacteria,4NE6G@976|Bacteroidetes,1IS3H@117747|Sphingobacteriia	976|Bacteroidetes	M	Belongs to the ompA family	-	-	-	-	-	-	-	-	-	-	-	-	CarboxypepD_reg,OmpA,PD40,TPR_8
BYD3_k127_8939311_6	760192.Halhy_6259	1.048e-28	124.0	COG2856@1|root,COG2856@2|Bacteria	2|Bacteria	E	Zn peptidase	-	-	-	-	-	-	-	-	-	-	-	-	Fic,Peptidase_M78
BYD3_k127_8939311_1	1121007.AUML01000005_gene2250	2.756e-74	259.0	COG1396@1|root,COG1396@2|Bacteria,4NN87@976|Bacteroidetes,1I1CB@117743|Flavobacteriia,2YI3Z@290174|Aquimarina	976|Bacteroidetes	K	Helix-turn-helix domain	-	-	-	-	-	-	-	-	-	-	-	-	HTH_3
BYD3_k127_8939311_0	1237149.C900_00991	2.652e-278	881.0	COG0474@1|root,COG0474@2|Bacteria,4NERM@976|Bacteroidetes,47JYI@768503|Cytophagia	976|Bacteroidetes	P	ATPase, P-type (transporting), HAD superfamily, subfamily IC	pacL	-	3.6.3.8	ko:K01537	-	-	-	-	ko00000,ko01000	3.A.3.2	-	-	Cation_ATPase,Cation_ATPase_C,Cation_ATPase_N,E1-E2_ATPase,Hydrolase,Hydrolase_3
BYD3_k127_8939311_7	1270193.JARP01000001_gene2903	6.153e-13	68.0	2DS2Y@1|root,33E9X@2|Bacteria,4NY47@976|Bacteroidetes,1IN5B@117743|Flavobacteriia,2NXVX@237|Flavobacterium	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_8939311_4	452637.Oter_3033	3.603e-42	160.0	COG3631@1|root,COG3631@2|Bacteria	2|Bacteria	S	light absorption	-	-	-	ko:K06893	-	-	-	-	ko00000	-	-	-	DUF2358,SnoaL_2
BYD3_k127_8939311_3	1341181.FLJC2902T_00880	6.295e-61	220.0	2C3WA@1|root,2Z8P1@2|Bacteria,4NW8R@976|Bacteroidetes,1IAW1@117743|Flavobacteriia,2NWKD@237|Flavobacterium	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_8939311_2	1249975.JQLP01000001_gene2994	1.72e-70	248.0	COG0861@1|root,COG0861@2|Bacteria,4NFFD@976|Bacteroidetes,1HXRT@117743|Flavobacteriia,2P64W@244698|Gillisia	976|Bacteroidetes	P	Integral membrane protein TerC family	terC	-	-	-	-	-	-	-	-	-	-	-	TerC
BYD3_k127_8940940_6	504472.Slin_3399	5.566e-59	209.0	COG0521@1|root,COG0521@2|Bacteria,4NG3I@976|Bacteroidetes,47JEA@768503|Cytophagia	976|Bacteroidetes	H	Starch-binding associating with outer membrane	-	-	-	-	-	-	-	-	-	-	-	-	SusD-like_2
BYD3_k127_8940940_3	694427.Palpr_0233	6.391e-125	410.0	COG1524@1|root,COG1524@2|Bacteria,4PKSD@976|Bacteroidetes,2FVX7@200643|Bacteroidia	976|Bacteroidetes	S	Type I phosphodiesterase / nucleotide pyrophosphatase	-	-	-	-	-	-	-	-	-	-	-	-	Metalloenzyme,Phosphodiest
BYD3_k127_8940940_8	1124780.ANNU01000028_gene1007	3.69e-45	172.0	COG0810@1|root,COG0810@2|Bacteria,4NMG7@976|Bacteroidetes,47KAX@768503|Cytophagia	976|Bacteroidetes	U	Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins	-	-	-	ko:K03832	-	-	-	-	ko00000,ko02000	2.C.1.1	-	-	TonB_C
BYD3_k127_8940940_5	1121875.KB907550_gene624	2.331e-105	357.0	COG1680@1|root,COG1680@2|Bacteria,4NI1Z@976|Bacteroidetes,1HYQF@117743|Flavobacteriia	976|Bacteroidetes	V	COG1680 Beta-lactamase class C and other penicillin binding proteins	-	-	-	-	-	-	-	-	-	-	-	-	Beta-lactamase,DUF3471
BYD3_k127_8940940_2	1288963.ADIS_0344	7.758e-179	568.0	COG3616@1|root,COG3616@2|Bacteria	2|Bacteria	E	Alanine racemase, N-terminal domain	dhaa	-	4.1.2.42,4.1.3.41	ko:K18425,ko:K19967	-	-	-	-	ko00000,ko01000	-	-	-	Ala_racemase_N,D-ser_dehydrat
BYD3_k127_8940940_7	926549.KI421517_gene521	1.324e-56	201.0	COG0346@1|root,COG0346@2|Bacteria,4NSC9@976|Bacteroidetes,47RDB@768503|Cytophagia	976|Bacteroidetes	E	Glyoxalase-like domain	-	-	4.4.1.5	ko:K01759	ko00620,map00620	-	R02530	RC00004,RC00740	ko00000,ko00001,ko01000	-	-	-	Glyoxalase
BYD3_k127_8940940_4	1121957.ATVL01000008_gene4412	2.18e-106	353.0	COG0657@1|root,COG0657@2|Bacteria,4NH62@976|Bacteroidetes,47JUA@768503|Cytophagia	976|Bacteroidetes	I	alpha/beta hydrolase fold	-	-	-	-	-	-	-	-	-	-	-	-	Abhydrolase_3,Peptidase_S9
BYD3_k127_8940940_1	1123248.KB893326_gene1500	3.628e-294	912.0	COG3250@1|root,COG3250@2|Bacteria,4NFPC@976|Bacteroidetes,1IQJ2@117747|Sphingobacteriia	976|Bacteroidetes	G	Belongs to the glycosyl hydrolase 2 family	-	-	-	-	-	-	-	-	-	-	-	-	Glyco_hydro_2,Glyco_hydro_2_C,Glyco_hydro_2_N
BYD3_k127_8940940_0	1121904.ARBP01000049_gene4417	0.0	1011.0	COG3533@1|root,COG3533@2|Bacteria,4NG7T@976|Bacteroidetes,47NSK@768503|Cytophagia	976|Bacteroidetes	S	Beta-L-arabinofuranosidase, GH127	-	-	-	-	-	-	-	-	-	-	-	-	Glyco_hydro_127
BYD3_k127_8949204_3	643867.Ftrac_1423	9.52e-95	314.0	COG2518@1|root,COG2518@2|Bacteria,4NFCU@976|Bacteroidetes,47P7V@768503|Cytophagia	976|Bacteroidetes	J	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins	pcm	-	2.1.1.77	ko:K00573	-	-	-	-	ko00000,ko01000	-	-	-	PCMT
BYD3_k127_8949204_1	153721.MYP_1181	1.768e-166	534.0	COG0498@1|root,COG0498@2|Bacteria,4NEAA@976|Bacteroidetes,47KUN@768503|Cytophagia	976|Bacteroidetes	E	Threonine synthase	thrC	-	4.2.3.1	ko:K01733	ko00260,ko00750,ko01100,ko01110,ko01120,ko01230,map00260,map00750,map01100,map01110,map01120,map01230	M00018	R01466,R05086	RC00017,RC00526	ko00000,ko00001,ko00002,ko01000	-	-	-	PALP,Thr_synth_N
BYD3_k127_8949204_2	153721.MYP_1180	1.163e-125	409.0	COG0083@1|root,COG0083@2|Bacteria,4NE2M@976|Bacteroidetes,47KGY@768503|Cytophagia	976|Bacteroidetes	E	Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate	thrB	-	2.7.1.39	ko:K00872	ko00260,ko01100,ko01110,ko01120,ko01230,map00260,map01100,map01110,map01120,map01230	M00018	R01771	RC00002,RC00017	ko00000,ko00001,ko00002,ko01000	-	-	-	GHMP_kinases_C,GHMP_kinases_N
BYD3_k127_8949204_0	1120965.AUBV01000008_gene1993	1.653e-310	972.0	COG0460@1|root,COG0527@1|root,COG0460@2|Bacteria,COG0527@2|Bacteria,4NFGR@976|Bacteroidetes,47KEQ@768503|Cytophagia	976|Bacteroidetes	E	TIGRFAM Aspartate kinase	thrA	-	1.1.1.3,2.7.2.4	ko:K12524	ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01230	M00016,M00017,M00018,M00526,M00527	R00480,R01773,R01775	RC00002,RC00043,RC00087	ko00000,ko00001,ko00002,ko01000	-	-	-	AA_kinase,ACT,ACT_7,Homoserine_dh,NAD_binding_3
BYD3_k127_8949204_4	1279009.ADICEAN_03480	5.509e-60	209.0	COG1607@1|root,COG1607@2|Bacteria,4NERA@976|Bacteroidetes,47P9H@768503|Cytophagia	976|Bacteroidetes	I	PFAM thioesterase superfamily	-	-	-	-	-	-	-	-	-	-	-	-	4HBT
BYD3_k127_8949809_5	925409.KI911562_gene683	8.443e-93	313.0	COG1181@1|root,COG1181@2|Bacteria,4P8F6@976|Bacteroidetes	2|Bacteria	M	Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain	-	-	6.3.2.4	ko:K01921	ko00473,ko00550,ko01100,ko01502,map00473,map00550,map01100,map01502	-	R01150	RC00064,RC00141	ko00000,ko00001,ko01000,ko01011	-	-	-	Dala_Dala_lig_C,Dala_Dala_lig_N
BYD3_k127_8949809_10	3055.EDP08998	3.308e-38	149.0	2BD1A@1|root,2S11B@2759|Eukaryota	2759|Eukaryota	-	-	-	-	-	-	-	-	-	-	-	-	-	-	SET
BYD3_k127_8949809_1	926549.KI421517_gene1091	1.855e-173	548.0	COG2730@1|root,COG2730@2|Bacteria,4NIBG@976|Bacteroidetes,47P3X@768503|Cytophagia	976|Bacteroidetes	G	Cellulase (glycosyl hydrolase family 5)	-	-	3.2.1.4	ko:K01179	ko00500,ko01100,map00500,map01100	-	R06200,R11307,R11308	-	ko00000,ko00001,ko01000	-	GH5,GH9	-	CBM_6,Cellulase
BYD3_k127_8949809_3	861299.J421_5737	3.673e-129	426.0	COG2133@1|root,COG2133@2|Bacteria	2|Bacteria	G	pyrroloquinoline quinone binding	-	-	-	-	-	-	-	-	-	-	-	-	Cytochrom_C,GSDH,Laminin_G_3
BYD3_k127_8949809_11	1379270.AUXF01000001_gene2079	4.075e-27	116.0	COG4319@1|root,COG4319@2|Bacteria	2|Bacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	ABM,DUF3225,DUF4440,SnoaL_2,SnoaL_3
BYD3_k127_8949809_9	1392498.JQLH01000001_gene1343	1.484e-59	213.0	COG4339@1|root,COG4339@2|Bacteria,4NP5E@976|Bacteroidetes,1I2GP@117743|Flavobacteriia	976|Bacteroidetes	S	protein conserved in bacteria	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_8949809_2	616991.JPOO01000003_gene2015	6.846e-141	453.0	COG2010@1|root,COG2010@2|Bacteria,4PMA9@976|Bacteroidetes,1HXRI@117743|Flavobacteriia,23GCK@178469|Arenibacter	976|Bacteroidetes	C	Domain of Unknown Function (DUF1080)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1080
BYD3_k127_8949809_0	1434325.AZQN01000003_gene2370	1.259e-249	786.0	COG1082@1|root,COG1082@2|Bacteria,4NEWC@976|Bacteroidetes,47JIF@768503|Cytophagia	976|Bacteroidetes	G	Glycoside hydrolase 97	-	-	3.2.1.20	ko:K01187	ko00052,ko00500,ko01100,map00052,map00500,map01100	-	R00028,R00801,R00802,R06087,R06088	RC00028,RC00049,RC00077	ko00000,ko00001,ko01000	-	GH31	-	GH97_C,GH97_N,Glyco_hydro_97
BYD3_k127_8949809_4	761193.Runsl_2277	1.216e-93	317.0	COG3325@1|root,COG3325@2|Bacteria,4NNUM@976|Bacteroidetes,47PUW@768503|Cytophagia	976|Bacteroidetes	G	Glycoside hydrolase family	-	-	3.2.1.14	ko:K01183	ko00520,ko01100,map00520,map01100	-	R01206,R02334	RC00467	ko00000,ko00001,ko01000	-	GH18	-	Glyco_hydro_18
BYD3_k127_8949809_6	929562.Emtol_0946	7.159e-91	305.0	COG5507@1|root,COG5507@2|Bacteria,4NJE8@976|Bacteroidetes,47NID@768503|Cytophagia	976|Bacteroidetes	S	NIPSNAP	-	-	-	-	-	-	-	-	-	-	-	-	NIPSNAP
BYD3_k127_8949809_8	1121324.CLIT_2c03230	1.253e-63	226.0	COG2998@1|root,COG2998@2|Bacteria,1V9V8@1239|Firmicutes,25H3U@186801|Clostridia	186801|Clostridia	H	Copper amine oxidase N-terminal domain	-	-	-	-	-	-	-	-	-	-	-	-	Cu_amine_oxidN1
BYD3_k127_8949809_7	1237149.C900_00102	9.687e-68	235.0	COG1595@1|root,COG1595@2|Bacteria,4NKHT@976|Bacteroidetes,47P68@768503|Cytophagia	976|Bacteroidetes	K	TIGRFAM RNA polymerase sigma factor, sigma-70 family	-	-	-	ko:K03088	-	-	-	-	ko00000,ko03021	-	-	-	Sigma70_r2,Sigma70_r4_2
BYD3_k127_8963278_4	926561.KB900617_gene1547	1.849e-29	132.0	COG1520@1|root,COG1520@2|Bacteria,1VACB@1239|Firmicutes,24N2Q@186801|Clostridia	186801|Clostridia	S	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_8963278_2	1205680.CAKO01000010_gene3904	1.763e-81	282.0	COG1878@1|root,COG1878@2|Bacteria,1MVWU@1224|Proteobacteria,2TUQ1@28211|Alphaproteobacteria,2JPSS@204441|Rhodospirillales	204441|Rhodospirillales	S	Putative cyclase	-	-	-	-	-	-	-	-	-	-	-	-	Cyclase
BYD3_k127_8963278_0	861299.J421_0317	4.188e-269	839.0	28JZZ@1|root,2Z9PZ@2|Bacteria	2|Bacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_8963278_3	861299.J421_0317	2.058e-80	268.0	28JZZ@1|root,2Z9PZ@2|Bacteria	2|Bacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_8963278_1	1123278.KB893568_gene2095	1.741e-100	355.0	COG2234@1|root,COG2234@2|Bacteria,4PJF4@976|Bacteroidetes,47N5T@768503|Cytophagia	976|Bacteroidetes	EG	Peptidase family M28	-	-	-	-	-	-	-	-	-	-	-	-	Peptidase_M28
BYD3_k127_8964795_0	945713.IALB_0592	0.0	1036.0	COG3808@1|root,COG3808@2|Bacteria	2|Bacteria	C	hydrogen-translocating pyrophosphatase activity	hppA	-	3.6.1.1	ko:K15987	ko00190,map00190	-	-	-	ko00000,ko00001,ko01000	3.A.10.1	-	-	H_PPase,OmpA
BYD3_k127_8964795_1	1121904.ARBP01000006_gene3975	1.689e-22	97.0	COG1607@1|root,COG1607@2|Bacteria,4NERA@976|Bacteroidetes,47P9H@768503|Cytophagia	976|Bacteroidetes	I	PFAM thioesterase superfamily	-	-	-	-	-	-	-	-	-	-	-	-	4HBT
BYD3_k127_897531_1	1237149.C900_03756	0.0	1241.0	COG0842@1|root,COG1131@1|root,COG0842@2|Bacteria,COG1131@2|Bacteria,4NHPD@976|Bacteroidetes,47KQD@768503|Cytophagia	976|Bacteroidetes	V	ABC-2 type transporter	-	-	-	ko:K21397	-	-	-	-	ko00000,ko02000	3.A.1	-	-	ABC2_membrane,ABC_tran,TerB
BYD3_k127_897531_5	1237149.C900_03757	1.157e-63	219.0	2CEYK@1|root,31W5M@2|Bacteria,4NQEQ@976|Bacteroidetes,47R7M@768503|Cytophagia	976|Bacteroidetes	S	Domain of unknown function (DUF1987)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1987
BYD3_k127_897531_4	1237149.C900_03758	6.846e-70	241.0	2AAU0@1|root,3106Q@2|Bacteria,4NNSV@976|Bacteroidetes,47Q0I@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_897531_0	1237149.C900_03759	0.0	1380.0	COG2202@1|root,COG2203@1|root,COG2208@1|root,COG2202@2|Bacteria,COG2203@2|Bacteria,COG2208@2|Bacteria,4NIXZ@976|Bacteroidetes,47MCW@768503|Cytophagia	976|Bacteroidetes	T	Sigma factor PP2C-like phosphatases	-	-	-	-	-	-	-	-	-	-	-	-	GAF_2,HAMP,PAS,PAS_4,PAS_9,SpoIIE
BYD3_k127_897531_6	1237149.C900_03760	4.205e-43	167.0	COG3605@1|root,COG3605@2|Bacteria,4P41N@976|Bacteroidetes,47VIK@768503|Cytophagia	976|Bacteroidetes	T	GAF domain	-	-	-	-	-	-	-	-	-	-	-	-	GAF_2
BYD3_k127_897531_3	1124780.ANNU01000049_gene2202	1.93e-94	312.0	COG2201@1|root,COG2201@2|Bacteria,4NNR3@976|Bacteroidetes,47PAB@768503|Cytophagia	976|Bacteroidetes	NT	CheB methylesterase	-	-	3.1.1.61,3.5.1.44	ko:K03412	ko02020,ko02030,map02020,map02030	M00506	-	-	ko00000,ko00001,ko00002,ko01000,ko02022,ko02035	-	-	-	CheB_methylest
BYD3_k127_897531_2	1237149.C900_03762	1.32e-132	427.0	COG1352@1|root,COG1352@2|Bacteria,4NFDS@976|Bacteroidetes,47JV5@768503|Cytophagia	976|Bacteroidetes	NT	PFAM MCP methyltransferase CheR-type	-	-	2.1.1.80	ko:K00575	ko02020,ko02030,map02020,map02030	-	-	-	ko00000,ko00001,ko01000,ko02035	-	-	-	CheR,CheR_N
BYD3_k127_898949_2	509635.N824_08915	6.396e-100	332.0	COG4102@1|root,COG4102@2|Bacteria,4NFFC@976|Bacteroidetes,1IR10@117747|Sphingobacteriia	976|Bacteroidetes	S	Protein of unknown function (DUF1501)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1501
BYD3_k127_898949_0	1150600.ADIARSV_1760	1.188e-188	606.0	COG5267@1|root,COG5267@2|Bacteria,4NHSB@976|Bacteroidetes,1IP4C@117747|Sphingobacteriia	976|Bacteroidetes	S	Protein of unknown function (DUF1800)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1800
BYD3_k127_898949_3	278963.ATWD01000001_gene1891	5.159e-13	70.0	2EQUD@1|root,33IE5@2|Bacteria,3Y5Y4@57723|Acidobacteria,2JNQ7@204432|Acidobacteriia	204432|Acidobacteriia	S	YXWGXW repeat (2 copies)	-	-	-	-	-	-	-	-	-	-	-	-	YXWGXW
BYD3_k127_898949_1	760192.Halhy_4420	1.751e-120	394.0	COG2311@1|root,COG2311@2|Bacteria,4NG01@976|Bacteroidetes	976|Bacteroidetes	S	membrane	-	-	-	ko:K07148	-	-	-	-	ko00000	-	-	-	DUF418
BYD3_k127_9003258_0	1121481.AUAS01000001_gene4320	1.694e-210	689.0	COG1629@1|root,COG1629@2|Bacteria,COG4771@2|Bacteria,4NDXS@976|Bacteroidetes,47KCF@768503|Cytophagia	976|Bacteroidetes	P	PFAM TonB-dependent Receptor Plug	-	-	-	-	-	-	-	-	-	-	-	-	CarbopepD_reg_2,Plug,TonB_dep_Rec
BYD3_k127_9003258_1	1123248.KB893332_gene2260	5.415e-162	528.0	COG0446@1|root,COG0446@2|Bacteria,4NE3A@976|Bacteroidetes,1IQVI@117747|Sphingobacteriia	976|Bacteroidetes	P	PFAM RagB SusD	-	-	-	ko:K21572	-	-	-	-	ko00000,ko02000	8.A.46.1,8.A.46.3	-	-	SusD-like_3,SusD_RagB
BYD3_k127_9003258_2	1499967.BAYZ01000164_gene6657	4.857e-29	134.0	COG0642@1|root,COG3292@1|root,COG2205@2|Bacteria,COG3292@2|Bacteria,2NNZT@2323|unclassified Bacteria	2|Bacteria	T	Two component regulator propeller	-	-	-	-	-	-	-	-	-	-	-	-	EAL,GGDEF,HATPase_c,HisKA,Reg_prop,Response_reg,Y_Y_Y
BYD3_k127_900714_1	1124780.ANNU01000025_gene3330	2.272e-230	730.0	COG5009@1|root,COG5009@2|Bacteria,4NECJ@976|Bacteroidetes,47MZQ@768503|Cytophagia	976|Bacteroidetes	M	Transglycosylase	-	-	2.4.1.129,3.4.16.4	ko:K05366	ko00550,ko01100,ko01501,map00550,map01100,map01501	-	-	-	ko00000,ko00001,ko01000,ko01003,ko01011	-	GT51	-	Transgly,Transpeptidase
BYD3_k127_900714_3	153721.MYP_3024	3.832e-68	238.0	COG3571@1|root,COG3571@2|Bacteria,4NEGG@976|Bacteroidetes,47UR6@768503|Cytophagia	976|Bacteroidetes	S	Dienelactone hydrolase family	-	-	-	ko:K07020	-	-	-	-	ko00000	-	-	-	Abhydrolase_5
BYD3_k127_900714_4	869213.JCM21142_41546	1.911e-23	102.0	COG1278@1|root,COG1278@2|Bacteria,4NURE@976|Bacteroidetes,47RX4@768503|Cytophagia	976|Bacteroidetes	K	Cold-shock protein	-	-	-	ko:K03704	-	-	-	-	ko00000,ko03000	-	-	-	CSD
BYD3_k127_900714_6	1223410.KN050846_gene1254	1.513e-19	96.0	28JMC@1|root,2Z9DW@2|Bacteria,4NIFI@976|Bacteroidetes,1HXDM@117743|Flavobacteriia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	Laminin_G_3
BYD3_k127_900714_5	1322246.BN4_11652	2.077e-20	95.0	COG4895@1|root,COG4895@2|Bacteria,1N7TD@1224|Proteobacteria,42V1D@68525|delta/epsilon subdivisions,2WRFN@28221|Deltaproteobacteria,2MDHS@213115|Desulfovibrionales	28221|Deltaproteobacteria	S	Uncharacterized conserved protein (DUF2196)	-	-	-	-	-	-	-	-	-	-	-	-	DUF2196
BYD3_k127_900714_2	929703.KE386491_gene3305	2.241e-115	384.0	COG1524@1|root,COG1524@2|Bacteria,4NFFG@976|Bacteroidetes,47MMJ@768503|Cytophagia	976|Bacteroidetes	S	PFAM type I phosphodiesterase nucleotide pyrophosphatase	-	-	3.1.3.1	ko:K01113	ko00790,ko01100,ko02020,map00790,map01100,map02020	M00126	R04620	RC00017	ko00000,ko00001,ko00002,ko01000	-	-	-	Phosphodiest
BYD3_k127_900714_0	929556.Solca_3818	7.673e-242	756.0	COG0457@1|root,COG2114@1|root,COG5616@1|root,COG0457@2|Bacteria,COG2114@2|Bacteria,COG5616@2|Bacteria,4NFW7@976|Bacteroidetes,1IR3J@117747|Sphingobacteriia	976|Bacteroidetes	K	Tetratricopeptide repeat	-	-	-	-	-	-	-	-	-	-	-	-	Guanylate_cyc,HTH_18,TPR_16,TPR_2,TPR_8
BYD3_k127_9021781_4	1189612.A33Q_2679	4.244e-06	53.0	COG1564@1|root,COG1564@2|Bacteria,4NGJH@976|Bacteroidetes,47MV1@768503|Cytophagia	976|Bacteroidetes	H	thiamine pyrophosphokinase	-	-	2.7.6.2	ko:K00949	ko00730,ko01100,map00730,map01100	-	R00619	RC00002,RC00017	ko00000,ko00001,ko01000	-	-	-	TPK_B1_binding,TPK_catalytic
BYD3_k127_9021781_2	1048983.EL17_18910	1.749e-59	212.0	COG1595@1|root,COG1595@2|Bacteria,4NNBY@976|Bacteroidetes,47PH5@768503|Cytophagia	976|Bacteroidetes	K	RNA polymerase sigma factor, sigma-70 family	-	-	-	ko:K03088	-	-	-	-	ko00000,ko03021	-	-	-	Sigma70_r2,Sigma70_r4_2
BYD3_k127_9021781_1	1189612.A33Q_1645	1.923e-60	222.0	COG3712@1|root,COG3712@2|Bacteria,4NMA2@976|Bacteroidetes,47PEK@768503|Cytophagia	976|Bacteroidetes	PT	Domain of unknown function (DUF4974)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4974,FecR
BYD3_k127_9021781_0	1048983.EL17_18920	2.027e-136	455.0	COG3078@1|root,COG3078@2|Bacteria,4NIGK@976|Bacteroidetes,47K8U@768503|Cytophagia	976|Bacteroidetes	P	GTPase activator activity	-	-	-	-	-	-	-	-	-	-	-	-	CarbopepD_reg_2
BYD3_k127_9021781_3	1239962.C943_04256	4.941e-20	90.0	COG3239@1|root,COG3239@2|Bacteria,4NERD@976|Bacteroidetes,47JP1@768503|Cytophagia	976|Bacteroidetes	I	fatty acid desaturase	-	-	1.14.19.3	ko:K00508	ko00591,ko01100,map00591,map01100	-	R07063	RC00917	ko00000,ko00001,ko01000,ko01004	-	-	-	FA_desaturase
BYD3_k127_903034_1	620914.JH621246_gene2770	6.966e-31	137.0	2DU2T@1|root,32UWG@2|Bacteria,4NSF5@976|Bacteroidetes,1I873@117743|Flavobacteriia,2YKXI@290174|Aquimarina	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_903034_0	620914.JH621246_gene2769	7.258e-181	577.0	COG3497@1|root,COG3497@2|Bacteria,4NEKK@976|Bacteroidetes,1HZQA@117743|Flavobacteriia,2YITF@290174|Aquimarina	976|Bacteroidetes	S	Phage tail sheath C-terminal domain	-	-	-	ko:K06907	-	-	-	-	ko00000	-	-	-	Phage_sheath_1,Phage_sheath_1C
BYD3_k127_9051643_2	1123057.P872_19585	1.013e-130	424.0	COG3263@1|root,COG3263@2|Bacteria,4NFNS@976|Bacteroidetes,47P2K@768503|Cytophagia	976|Bacteroidetes	P	TrkA-C domain	cvrA	-	-	ko:K11105	-	-	-	-	ko00000,ko02000	2.A.36.6	-	-	Na_H_Exchanger,TrkA_C
BYD3_k127_9051643_8	1237149.C900_00447	1.173e-47	177.0	COG0783@1|root,COG0783@2|Bacteria,4NQD2@976|Bacteroidetes,47XQU@768503|Cytophagia	976|Bacteroidetes	P	Belongs to the Dps family	-	-	-	ko:K04047	-	-	-	-	ko00000,ko03036	-	-	-	Ferritin
BYD3_k127_9051643_6	880070.Cycma_4909	2.974e-67	237.0	COG2755@1|root,COG2755@2|Bacteria,4NMGQ@976|Bacteroidetes,47QU7@768503|Cytophagia	976|Bacteroidetes	E	GDSL-like Lipase/Acylhydrolase family	-	-	-	-	-	-	-	-	-	-	-	-	Lipase_GDSL_2
BYD3_k127_9051643_9	324057.Pjdr2_2693	3.944e-41	156.0	COG0454@1|root,COG0456@2|Bacteria,1VBAE@1239|Firmicutes	1239|Firmicutes	K	PFAM Acetyltransferase (GNAT) family	-	-	-	-	-	-	-	-	-	-	-	-	Acetyltransf_1,Acetyltransf_7
BYD3_k127_9051643_1	1305737.JAFX01000001_gene3414	1.474e-146	468.0	COG0031@1|root,COG0031@2|Bacteria,4NF7E@976|Bacteroidetes,47J9D@768503|Cytophagia	976|Bacteroidetes	E	Belongs to the cysteine synthase cystathionine beta- synthase family	cysM	-	2.5.1.47	ko:K12339	ko00270,ko00920,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00270,map00920,map01100,map01110,map01120,map01130,map01200,map01230	M00021	R00897,R03132,R03601,R04859	RC00020,RC02814,RC02821,RC02876	ko00000,ko00001,ko00002,ko01000	-	-	-	PALP
BYD3_k127_9051643_3	1237149.C900_04081	1.638e-109	360.0	COG1045@1|root,COG1045@2|Bacteria,4NGZ7@976|Bacteroidetes,47JAY@768503|Cytophagia	976|Bacteroidetes	E	serine acetyltransferase	cysE	-	2.3.1.30	ko:K00640	ko00270,ko00920,ko01100,ko01110,ko01120,ko01200,ko01230,ko05111,map00270,map00920,map01100,map01110,map01120,map01200,map01230,map05111	M00021	R00586	RC00004,RC00041	ko00000,ko00001,ko00002,ko01000	-	-	-	Hexapep,SATase_N
BYD3_k127_9051643_5	493475.GARC_4526	8.262e-86	290.0	COG0730@1|root,COG0730@2|Bacteria,1MVY3@1224|Proteobacteria,1S21M@1236|Gammaproteobacteria,467A8@72275|Alteromonadaceae	1236|Gammaproteobacteria	S	Sulfite exporter TauE/SafE	-	-	-	ko:K07090	-	-	-	-	ko00000	-	-	-	TauE
BYD3_k127_9051643_4	761193.Runsl_4834	3.663e-98	327.0	COG2755@1|root,COG2755@2|Bacteria,4NHWJ@976|Bacteroidetes,47NGU@768503|Cytophagia	976|Bacteroidetes	E	lipolytic protein G-D-S-L family	-	-	-	-	-	-	-	-	-	-	-	-	Lipase_GDSL_2
BYD3_k127_9051643_7	1121481.AUAS01000002_gene3264	4.659e-61	217.0	28PRQ@1|root,2ZCDG@2|Bacteria,4NWY7@976|Bacteroidetes,47SAI@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_9051643_0	1408473.JHXO01000009_gene3309	1.125e-163	527.0	COG0612@1|root,COG0612@2|Bacteria,4NIQM@976|Bacteroidetes	976|Bacteroidetes	S	Insulinase (Peptidase family M16)	-	-	-	-	-	-	-	-	-	-	-	-	Peptidase_M16,Peptidase_M16_C
BYD3_k127_9051643_10	714943.Mucpa_4436	9.285e-13	72.0	COG0612@1|root,COG0612@2|Bacteria,4NHQP@976|Bacteroidetes,1IVW0@117747|Sphingobacteriia	976|Bacteroidetes	S	Insulinase (Peptidase family M16)	-	-	-	-	-	-	-	-	-	-	-	-	Peptidase_M16,Peptidase_M16_C
BYD3_k127_906735_2	153721.MYP_2591	2.002e-43	159.0	COG0492@1|root,COG0492@2|Bacteria,4NEQM@976|Bacteroidetes,47KZW@768503|Cytophagia	976|Bacteroidetes	C	Ferredoxin--NADP reductase	trxB2	-	1.8.1.9	ko:K00384	ko00450,map00450	-	R02016,R03596,R09372	RC00013,RC02518,RC02873	ko00000,ko00001,ko01000	-	-	-	Pyr_redox_2
BYD3_k127_906735_1	1124780.ANNU01000025_gene3372	6.472e-62	215.0	COG1846@1|root,COG1846@2|Bacteria,4NP8N@976|Bacteroidetes,47PSY@768503|Cytophagia	976|Bacteroidetes	K	transcriptional regulator	-	-	-	-	-	-	-	-	-	-	-	-	MarR,MarR_2
BYD3_k127_906735_4	362418.IW19_15945	2.254e-28	117.0	COG3801@1|root,COG3801@2|Bacteria,4NSK5@976|Bacteroidetes,1IAE8@117743|Flavobacteriia,2NWR1@237|Flavobacterium	976|Bacteroidetes	S	YjbR	-	-	-	-	-	-	-	-	-	-	-	-	YjbR
BYD3_k127_906735_6	886379.AEWI01000211_gene2505	3.011e-17	93.0	29130@1|root,2ZNQI@2|Bacteria,4P7H5@976|Bacteroidetes,2G24B@200643|Bacteroidia,3XJP7@558415|Marinilabiliaceae	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_906735_5	1121097.JCM15093_1412	4.359e-21	94.0	COG3344@1|root,COG3344@2|Bacteria,4NHMS@976|Bacteroidetes,2FQ3X@200643|Bacteroidia,4AVKC@815|Bacteroidaceae	976|Bacteroidetes	L	COG COG3344 Retron-type reverse transcriptase	-	-	-	-	-	-	-	-	-	-	-	-	GIIM,RVT_1
BYD3_k127_906735_0	485917.Phep_2386	1.076e-89	297.0	COG0262@1|root,COG0262@2|Bacteria,4NPM3@976|Bacteroidetes,1IT7M@117747|Sphingobacteriia	976|Bacteroidetes	H	RibD C-terminal domain	-	-	1.5.1.3	ko:K00287	ko00670,ko00790,ko01100,ko01523,map00670,map00790,map01100,map01523	M00126,M00840	R00936,R00937,R00939,R00940,R02235,R02236,R11765	RC00109,RC00110,RC00158	ko00000,ko00001,ko00002,ko01000	-	-	-	RibD_C
BYD3_k127_906735_3	566466.NOR53_3278	3.135e-29	127.0	COG0577@1|root,COG0577@2|Bacteria,1NREW@1224|Proteobacteria,1RVN1@1236|Gammaproteobacteria,1J78V@118884|unclassified Gammaproteobacteria	1236|Gammaproteobacteria	V	COG0577 ABC-type antimicrobial peptide transport system, permease component	-	-	-	ko:K02004	-	M00258	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	FtsX,MacB_PCD
BYD3_k127_9072440_2	1237149.C900_00375	1.07e-259	807.0	COG0423@1|root,COG0423@2|Bacteria,4NE1C@976|Bacteroidetes,47MCS@768503|Cytophagia	976|Bacteroidetes	J	Belongs to the class-II aminoacyl-tRNA synthetase family	glyQS	-	6.1.1.14	ko:K01880	ko00970,map00970	M00359,M00360	R03654	RC00055,RC00523	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029	-	-	-	HGTP_anticodon,tRNA-synt_2b
BYD3_k127_9072440_8	1124780.ANNU01000006_gene2896	8.457e-73	254.0	COG3228@1|root,COG3228@2|Bacteria,4NMII@976|Bacteroidetes,47QA7@768503|Cytophagia	976|Bacteroidetes	S	Glucose-regulated metallo-peptidase M90	-	-	-	ko:K09933	-	-	-	-	ko00000,ko01002	-	-	-	Peptidase_M90
BYD3_k127_9072440_3	1237149.C900_03148	5.039e-168	539.0	COG0232@1|root,COG0232@2|Bacteria,4NENM@976|Bacteroidetes,47KD3@768503|Cytophagia	976|Bacteroidetes	F	Deoxyguanosinetriphosphate triphosphohydrolase-like protein	dgt	-	3.1.5.1	ko:K01129	ko00230,map00230	-	R01856	RC00017	ko00000,ko00001,ko01000	-	-	-	HD,HD_assoc
BYD3_k127_9072440_1	1237149.C900_03147	1.049e-280	884.0	COG1033@1|root,COG1033@2|Bacteria,4NE0M@976|Bacteroidetes,47JQA@768503|Cytophagia	976|Bacteroidetes	S	COGs COG1033 exporter of the RND superfamily protein	-	-	-	ko:K07003	-	-	-	-	ko00000	-	-	-	MMPL
BYD3_k127_9072440_0	1120965.AUBV01000004_gene835	0.0	1559.0	COG0060@1|root,COG0060@2|Bacteria,4NEYT@976|Bacteroidetes,47JWU@768503|Cytophagia	976|Bacteroidetes	J	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)	ileS	GO:0003674,GO:0003824,GO:0004812,GO:0004822,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006428,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576	6.1.1.5	ko:K01870	ko00970,map00970	M00359,M00360	R03656	RC00055,RC00523	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	-	-	-	Anticodon_1,tRNA-synt_1
BYD3_k127_9072440_7	1237149.C900_03145	3.245e-85	288.0	COG0597@1|root,COG0597@2|Bacteria,4NEZN@976|Bacteroidetes,47MEJ@768503|Cytophagia	976|Bacteroidetes	M	This protein specifically catalyzes the removal of signal peptides from prolipoproteins	lspA	-	3.4.23.36	ko:K03101	ko03060,map03060	-	-	-	ko00000,ko00001,ko01000,ko01002	-	-	-	Peptidase_A8
BYD3_k127_9072440_9	925409.KI911562_gene60	4.22e-59	207.0	COG0531@1|root,COG0531@2|Bacteria,4NDU2@976|Bacteroidetes,1IPK3@117747|Sphingobacteriia	976|Bacteroidetes	E	amino acid	-	-	-	ko:K03294	-	-	-	-	ko00000	2.A.3.2	-	-	AA_permease,AA_permease_2
BYD3_k127_9072440_4	925409.KI911562_gene60	3.296e-161	513.0	COG0531@1|root,COG0531@2|Bacteria,4NDU2@976|Bacteroidetes,1IPK3@117747|Sphingobacteriia	976|Bacteroidetes	E	amino acid	-	-	-	ko:K03294	-	-	-	-	ko00000	2.A.3.2	-	-	AA_permease,AA_permease_2
BYD3_k127_9072440_6	1237149.C900_04521	7.861e-87	292.0	COG0745@1|root,COG0745@2|Bacteria,4NM5Q@976|Bacteroidetes,47PED@768503|Cytophagia	976|Bacteroidetes	K	Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain	-	-	-	-	-	-	-	-	-	-	-	-	Response_reg,Trans_reg_C
BYD3_k127_9072440_5	1237149.C900_04522	4.829e-155	499.0	COG5002@1|root,COG5002@2|Bacteria,4PKBV@976|Bacteroidetes,47M71@768503|Cytophagia	976|Bacteroidetes	T	Signal transduction histidine kinase	rprX	-	2.7.13.3	ko:K07636	ko02020,map02020	M00434	-	-	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	-	-	-	HATPase_c,HisKA
BYD3_k127_9072440_10	313606.M23134_07853	2.343e-26	113.0	2CG1Y@1|root,333IH@2|Bacteria,4NVMK@976|Bacteroidetes,47RKN@768503|Cytophagia	976|Bacteroidetes	S	Protein of unknown function (DUF1573)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1573
BYD3_k127_9072440_12	1048983.EL17_08550	6.282e-12	67.0	COG2352@1|root,COG2352@2|Bacteria,4NFC0@976|Bacteroidetes,47NF0@768503|Cytophagia	976|Bacteroidetes	C	Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle	ppc	-	4.1.1.31	ko:K01595	ko00620,ko00680,ko00710,ko00720,ko01100,ko01120,ko01200,map00620,map00680,map00710,map00720,map01100,map01120,map01200	M00168,M00170,M00171,M00172,M00173,M00346,M00374	R00345	RC02741	ko00000,ko00001,ko00002,ko01000	-	-	-	PEPcase
BYD3_k127_9078316_5	1089547.KB913013_gene2267	1.309e-08	67.0	2C9G6@1|root,330W3@2|Bacteria,4NVA7@976|Bacteroidetes,47RZD@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_9078316_1	929703.KE386491_gene2154	6.708e-47	174.0	COG1595@1|root,COG1595@2|Bacteria,4NQC9@976|Bacteroidetes,47QM4@768503|Cytophagia	976|Bacteroidetes	K	TIGRFAM RNA polymerase sigma factor, sigma-70 family	-	-	-	ko:K03088	-	-	-	-	ko00000,ko03021	-	-	-	Sigma70_r2,Sigma70_r4_2
BYD3_k127_9078316_2	1185876.BN8_05535	8.426e-21	104.0	COG4254@1|root,COG4254@2|Bacteria,4PPMS@976|Bacteroidetes,47RYS@768503|Cytophagia	976|Bacteroidetes	S	PFAM FecR protein	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_9078316_4	1541065.JRFE01000012_gene2450	2.452e-10	73.0	COG4447@1|root,COG4447@2|Bacteria,1G2KP@1117|Cyanobacteria	1117|Cyanobacteria	G	PFAM BNR Asp-box repeat	-	-	-	-	-	-	-	-	-	-	-	-	BNR,PSII_BNR,Sortilin-Vps10
BYD3_k127_9078316_3	1122225.AULQ01000011_gene10	2.693e-11	76.0	COG4447@1|root,COG4447@2|Bacteria,4NRP7@976|Bacteroidetes,1HYN2@117743|Flavobacteriia	976|Bacteroidetes	S	Photosynthesis system II assembly factor YCF48	-	-	-	-	-	-	-	-	-	-	-	-	BNR,PSII_BNR
BYD3_k127_9078316_0	1121481.AUAS01000017_gene2498	8.892e-156	520.0	COG0577@1|root,COG0577@2|Bacteria,4NDUK@976|Bacteroidetes,47JJN@768503|Cytophagia	976|Bacteroidetes	V	FtsX-like permease family	-	-	-	ko:K02004	-	M00258	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	FtsX,MacB_PCD
BYD3_k127_9087190_0	929562.Emtol_0851	4.61e-235	748.0	COG2091@1|root,COG2091@2|Bacteria,4NFQ6@976|Bacteroidetes,47MUU@768503|Cytophagia	976|Bacteroidetes	H	Carbohydrate family 9 binding domain-like	-	-	-	-	-	-	-	-	-	-	-	-	CBM9_1
BYD3_k127_9087190_6	1041138.KB890221_gene1623	1.918e-13	73.0	2DRQB@1|root,33CKR@2|Bacteria,1MZI3@1224|Proteobacteria,2UDVN@28211|Alphaproteobacteria,4BFEI@82115|Rhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_9087190_3	1121895.Q765_07535	1.871e-40	152.0	COG0596@1|root,COG0596@2|Bacteria,4NJQ8@976|Bacteroidetes,1I8JH@117743|Flavobacteriia,2NUPE@237|Flavobacterium	976|Bacteroidetes	S	Alpha/beta hydrolase family	-	-	-	-	-	-	-	-	-	-	-	-	Abhydrolase_6
BYD3_k127_9087190_1	929703.KE386491_gene1118	2.282e-153	486.0	COG2267@1|root,COG2267@2|Bacteria,4NFDA@976|Bacteroidetes,47NH1@768503|Cytophagia	976|Bacteroidetes	I	Serine aminopeptidase, S33	-	-	1.11.1.10,3.4.11.5	ko:K00433,ko:K01259	ko00330,map00330	-	R00135	-	ko00000,ko00001,ko01000,ko01002	-	-	-	Abhydrolase_1,Hydrolase_4
BYD3_k127_9087190_2	264462.Bd2335	1.449e-49	197.0	COG0784@1|root,COG5002@1|root,COG0784@2|Bacteria,COG5002@2|Bacteria,1NC9X@1224|Proteobacteria,43BU6@68525|delta/epsilon subdivisions,2X756@28221|Deltaproteobacteria	28221|Deltaproteobacteria	T	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase	-	-	-	-	-	-	-	-	-	-	-	-	HATPase_c,HisKA,Hpt,MASE1,PAS_9,Response_reg
BYD3_k127_9087190_5	471870.BACINT_04208	4.642e-23	114.0	COG0642@1|root,COG0745@1|root,COG3292@1|root,COG0745@2|Bacteria,COG2205@2|Bacteria,COG3292@2|Bacteria,4NDXU@976|Bacteroidetes,2FM2N@200643|Bacteroidia,4AMCC@815|Bacteroidaceae	976|Bacteroidetes	T	ATPase histidine kinase DNA gyrase B HSP90 domain protein	-	-	-	-	-	-	-	-	-	-	-	-	HATPase_c,HTH_18,HisKA,Reg_prop,Response_reg,Y_Y_Y
BYD3_k127_9087190_4	1121904.ARBP01000045_gene1842	8.301e-31	139.0	COG0457@1|root,COG0642@1|root,COG0745@1|root,COG0457@2|Bacteria,COG0745@2|Bacteria,COG2205@2|Bacteria,4NDXU@976|Bacteroidetes,47TVA@768503|Cytophagia	976|Bacteroidetes	T	helix_turn_helix, arabinose operon control protein	-	-	-	-	-	-	-	-	-	-	-	-	HATPase_c,HTH_18,HisKA,Reg_prop,Response_reg,TPR_12,TPR_8,Y_Y_Y
BYD3_k127_9087305_3	509635.N824_24005	1.51e-170	542.0	COG0842@1|root,COG0842@2|Bacteria,4NFM0@976|Bacteroidetes,1IPNI@117747|Sphingobacteriia	976|Bacteroidetes	V	ABC-2 type transporter	-	-	-	ko:K01992	-	M00254	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	ABC2_membrane_3
BYD3_k127_9087305_4	945713.IALB_2920	4.13e-62	230.0	COG2114@1|root,COG2114@2|Bacteria	2|Bacteria	T	Pfam Adenylate and Guanylate cyclase catalytic domain	-	-	4.6.1.1	ko:K01768	ko00230,ko02025,ko04113,ko04213,map00230,map02025,map04113,map04213	M00695	R00089,R00434	RC00295	ko00000,ko00001,ko00002,ko01000	-	-	-	Guanylate_cyc
BYD3_k127_9087305_5	398525.KB900701_gene2436	1.045e-29	123.0	COG0824@1|root,COG0824@2|Bacteria,1N8J9@1224|Proteobacteria,2UHEA@28211|Alphaproteobacteria,3JY8Z@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Thioesterase-like superfamily	-	-	-	ko:K07107	-	-	-	-	ko00000,ko01000	-	-	-	4HBT,4HBT_2
BYD3_k127_9087305_0	1123277.KB893176_gene3687	1.018e-320	992.0	COG2225@1|root,COG2225@2|Bacteria,4NF5H@976|Bacteroidetes,47JKU@768503|Cytophagia	976|Bacteroidetes	C	Malate synthase	-	-	2.3.3.9	ko:K01638	ko00620,ko00630,ko01100,ko01110,ko01120,ko01200,map00620,map00630,map01100,map01110,map01120,map01200	M00012	R00472	RC00004,RC00308,RC02747	ko00000,ko00001,ko00002,ko01000	-	-	-	Malate_synthase
BYD3_k127_9087305_1	1123278.KB893574_gene6159	1.663e-270	842.0	COG1620@1|root,COG1620@2|Bacteria,4NHVH@976|Bacteroidetes,47Q1C@768503|Cytophagia	976|Bacteroidetes	C	L-lactate permease	lctP	-	-	ko:K03303	-	-	-	-	ko00000,ko02000	2.A.14	-	-	Lactate_perm
BYD3_k127_9087305_2	1288963.ADIS_1943	3.069e-234	733.0	COG0247@1|root,COG0277@1|root,COG0247@2|Bacteria,COG0277@2|Bacteria,4NEK3@976|Bacteroidetes,47JNC@768503|Cytophagia	976|Bacteroidetes	C	FAD linked oxidases, C-terminal domain	-	-	-	-	-	-	-	-	-	-	-	-	CCG,FAD-oxidase_C,FAD_binding_4,Fer4_17,Fer4_8
BYD3_k127_924205_2	1237149.C900_05130	4.698e-245	764.0	COG1866@1|root,COG1866@2|Bacteria,4NEGI@976|Bacteroidetes,47JC3@768503|Cytophagia	976|Bacteroidetes	H	Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA	pckA	-	4.1.1.49	ko:K01610	ko00010,ko00020,ko00620,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00020,map00620,map00710,map01100,map01110,map01120,map01130,map01200	M00003,M00170	R00341	RC00002,RC02741	ko00000,ko00001,ko00002,ko01000	-	-	-	PEPCK_ATP
BYD3_k127_924205_3	1191523.MROS_2252	1.637e-86	301.0	COG3104@1|root,COG3104@2|Bacteria	2|Bacteria	E	oligopeptide transport	-	-	-	ko:K03305	-	-	-	-	ko00000	2.A.17	-	-	MFS_1,PTR2
BYD3_k127_924205_0	1150600.ADIARSV_2574	2.415e-296	922.0	COG1297@1|root,COG1297@2|Bacteria,4NEIY@976|Bacteroidetes,1IP8J@117747|Sphingobacteriia	976|Bacteroidetes	S	OPT oligopeptide transporter protein	-	-	-	-	-	-	-	-	-	-	-	-	OPT
BYD3_k127_924205_1	1237149.C900_05125	4.587e-275	854.0	COG0459@1|root,COG0459@2|Bacteria,4NDZM@976|Bacteroidetes,47JYW@768503|Cytophagia	976|Bacteroidetes	O	Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions	groL	GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006457,GO:0006458,GO:0008150,GO:0009987,GO:0016465,GO:0032991,GO:0044183,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0051082,GO:0061077,GO:0101031,GO:1990220	-	ko:K04077	ko03018,ko04212,ko04940,ko05134,ko05152,map03018,map04212,map04940,map05134,map05152	-	-	-	ko00000,ko00001,ko03019,ko03029,ko03110,ko04147	-	-	-	Cpn60_TCP1
BYD3_k127_924205_6	643867.Ftrac_0860	1.961e-40	151.0	COG0234@1|root,COG0234@2|Bacteria,4NS7D@976|Bacteroidetes,47QCW@768503|Cytophagia	976|Bacteroidetes	O	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter	groS	GO:0003674,GO:0005488,GO:0005515,GO:0006457,GO:0006458,GO:0006950,GO:0006986,GO:0008150,GO:0009987,GO:0010033,GO:0035966,GO:0042221,GO:0043167,GO:0043169,GO:0046872,GO:0050896,GO:0051082,GO:0051084,GO:0051085,GO:0051087,GO:0061077	-	ko:K04078	-	-	-	-	ko00000,ko03029,ko03110	-	-	-	Cpn10
BYD3_k127_924205_4	1237149.C900_05123	3.927e-79	271.0	28KKN@1|root,2ZA5E@2|Bacteria,4NMKH@976|Bacteroidetes,47PT5@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_924205_9	1237149.C900_05122	4.452e-27	113.0	COG1314@1|root,COG1314@2|Bacteria,4NUYQ@976|Bacteroidetes,47SC6@768503|Cytophagia	976|Bacteroidetes	U	PFAM Preprotein translocase SecG subunit	secG	-	-	ko:K03075	ko02024,ko03060,ko03070,map02024,map03060,map03070	M00335	-	-	ko00000,ko00001,ko00002,ko02044	3.A.5.1,3.A.5.2	-	-	SecG
BYD3_k127_924205_8	1237149.C900_05121	2.085e-29	130.0	2ECXC@1|root,336UI@2|Bacteria,4NV8T@976|Bacteroidetes,47RWP@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_924205_7	643867.Ftrac_0759	2.872e-37	146.0	2CADI@1|root,32RR7@2|Bacteria,4NP51@976|Bacteroidetes,47P8C@768503|Cytophagia	976|Bacteroidetes	S	Lipopolysaccharide-assembly	lptE	-	-	-	-	-	-	-	-	-	-	-	LptE
BYD3_k127_924205_5	1237149.C900_05119	6.075e-57	203.0	COG2204@1|root,COG2204@2|Bacteria,4NDWI@976|Bacteroidetes,47JXW@768503|Cytophagia	976|Bacteroidetes	K	sigma54 specific, transcriptional regulator, Fis family	fhlA	-	-	-	-	-	-	-	-	-	-	-	HTH_8,Sigma54_activat
BYD3_k127_925071_6	1237149.C900_01024	4.497e-45	166.0	COG0299@1|root,COG0299@2|Bacteria,4NNZP@976|Bacteroidetes,47KTP@768503|Cytophagia	976|Bacteroidetes	F	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate	purN	-	2.1.2.2	ko:K11175	ko00230,ko00670,ko01100,ko01110,ko01130,map00230,map00670,map01100,map01110,map01130	M00048	R04325,R04326	RC00026,RC00197,RC01128	ko00000,ko00001,ko00002,ko01000	-	-	-	Formyl_trans_N
BYD3_k127_925071_7	1123248.KB893326_gene1415	3.503e-42	159.0	COG0824@1|root,COG0824@2|Bacteria,4NS45@976|Bacteroidetes,1ITZC@117747|Sphingobacteriia	976|Bacteroidetes	S	Thioesterase-like superfamily	-	-	-	ko:K07107	-	-	-	-	ko00000,ko01000	-	-	-	4HBT_2
BYD3_k127_925071_1	1189612.A33Q_0564	9.694e-202	635.0	COG3508@1|root,COG3508@2|Bacteria,4NEYZ@976|Bacteroidetes,47JCV@768503|Cytophagia	976|Bacteroidetes	Q	Homogentisate 12-dioxygenase	-	-	1.13.11.5	ko:K00451	ko00350,ko00643,ko01100,ko01120,map00350,map00643,map01100,map01120	M00044	R02519	RC00737	ko00000,ko00001,ko00002,ko01000	-	-	-	HgmA
BYD3_k127_925071_0	1237149.C900_01742	3.732e-239	749.0	COG0793@1|root,COG0793@2|Bacteria,4NEGV@976|Bacteroidetes,47JP7@768503|Cytophagia	976|Bacteroidetes	M	Belongs to the peptidase S41A family	ctp	-	3.4.21.102	ko:K03797	-	-	-	-	ko00000,ko01000,ko01002	-	-	-	PDZ_2,Peptidase_S41
BYD3_k127_925071_2	1237149.C900_01741	1.364e-89	302.0	COG2846@1|root,COG2846@2|Bacteria,4NPQ7@976|Bacteroidetes,47PY2@768503|Cytophagia	976|Bacteroidetes	D	Di-iron-containing protein involved in the repair of iron-sulfur clusters	-	-	-	ko:K07322	-	-	-	-	ko00000	-	-	-	Hemerythrin
BYD3_k127_925071_8	509635.N824_23945	3.758e-42	160.0	COG0262@1|root,COG0262@2|Bacteria,4NJIQ@976|Bacteroidetes	976|Bacteroidetes	H	bifunctional deaminase-reductase domain protein	-	-	1.5.1.3	ko:K00287	ko00670,ko00790,ko01100,ko01523,map00670,map00790,map01100,map01523	M00126,M00840	R00936,R00937,R00939,R00940,R02235,R02236,R11765	RC00109,RC00110,RC00158	ko00000,ko00001,ko00002,ko01000	-	-	-	RibD_C
BYD3_k127_925071_5	761193.Runsl_0806	4.966e-47	172.0	COG0816@1|root,COG0816@2|Bacteria,4NQ8B@976|Bacteroidetes,47QCM@768503|Cytophagia	976|Bacteroidetes	L	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA	ruvX	GO:0000966,GO:0000967,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0022613,GO:0034470,GO:0034471,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:1901360	-	ko:K07447	-	-	-	-	ko00000,ko01000	-	-	-	RuvX
BYD3_k127_925071_3	1237149.C900_01739	6.141e-75	255.0	COG0242@1|root,COG0242@2|Bacteria,4NFB4@976|Bacteroidetes,47JIG@768503|Cytophagia	976|Bacteroidetes	J	Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions	def	-	3.5.1.88	ko:K01462	-	-	-	-	ko00000,ko01000	-	-	-	Pep_deformylase
BYD3_k127_925071_4	1237149.C900_01738	2.779e-70	241.0	COG0436@1|root,COG0436@2|Bacteria,4NES3@976|Bacteroidetes,47MBR@768503|Cytophagia	976|Bacteroidetes	E	PFAM Aminotransferase class I and II	ybdL	-	2.6.1.88	ko:K14287	-	-	R08618	RC00006,RC00025	ko00000,ko01000,ko01007	-	-	-	Aminotran_1_2
BYD3_k127_933487_6	1120965.AUBV01000018_gene198	4.364e-34	153.0	COG1629@1|root,COG1629@2|Bacteria,4NMTD@976|Bacteroidetes,47PTS@768503|Cytophagia	976|Bacteroidetes	P	CarboxypepD_reg-like domain	-	-	-	-	-	-	-	-	-	-	-	-	CarbopepD_reg_2,Plug
BYD3_k127_933487_4	1120968.AUBX01000011_gene3056	8.376e-64	251.0	COG1629@1|root,COG1629@2|Bacteria,4NMTD@976|Bacteroidetes,47PTS@768503|Cytophagia	976|Bacteroidetes	P	CarboxypepD_reg-like domain	-	-	-	-	-	-	-	-	-	-	-	-	CarbopepD_reg_2,Plug
BYD3_k127_933487_5	376686.Fjoh_0125	4.301e-34	139.0	COG3637@1|root,COG3637@2|Bacteria,4NR9K@976|Bacteroidetes,1I34P@117743|Flavobacteriia,2NWCZ@237|Flavobacterium	976|Bacteroidetes	M	Outer membrane protein beta-barrel domain	-	-	-	-	-	-	-	-	-	-	-	-	OMP_b-brl_2
BYD3_k127_933487_3	1379698.RBG1_1C00001G0607	3.797e-67	243.0	COG0457@1|root,COG0515@1|root,COG0457@2|Bacteria,COG0515@2|Bacteria,2NQNE@2323|unclassified Bacteria	2|Bacteria	T	Serine threonine protein kinase	-	-	2.7.11.1	ko:K12132	-	-	-	-	ko00000,ko01000,ko01001	-	-	-	PASTA,Pkinase,TPR_2,TPR_8
BYD3_k127_933487_2	880070.Cycma_3864	1.164e-71	250.0	COG0457@1|root,COG2114@1|root,COG2207@1|root,COG5616@1|root,COG0457@2|Bacteria,COG2114@2|Bacteria,COG2207@2|Bacteria,COG5616@2|Bacteria,4NFW7@976|Bacteroidetes,47N72@768503|Cytophagia	976|Bacteroidetes	K	helix_turn_helix, arabinose operon control protein	-	-	-	-	-	-	-	-	-	-	-	-	ANAPC3,Guanylate_cyc,HTH_18,TPR_19,TPR_8
BYD3_k127_933487_1	226186.BT_2529	3.805e-97	331.0	COG0613@1|root,COG0613@2|Bacteria,4NHZ5@976|Bacteroidetes,2FQW5@200643|Bacteroidia,4AN9D@815|Bacteroidaceae	976|Bacteroidetes	S	Domain of unknown function	-	-	3.1.3.97	ko:K07053	-	-	R00188,R11188	RC00078	ko00000,ko01000	-	-	-	DUF5001
BYD3_k127_933487_7	306281.AJLK01000131_gene1433	8.872e-24	107.0	COG3652@1|root,COG3652@2|Bacteria,1G8AC@1117|Cyanobacteria,1JMW9@1189|Stigonemataceae	1117|Cyanobacteria	S	Domain of unknown function (DUF4142)	-	-	-	ko:K08995	-	-	-	-	ko00000	-	-	-	DUF4142
BYD3_k127_933487_0	714943.Mucpa_2156	1.77e-133	446.0	COG0577@1|root,COG0577@2|Bacteria,4NDUK@976|Bacteroidetes,1IPB0@117747|Sphingobacteriia	976|Bacteroidetes	V	ABC-type antimicrobial peptide transport system, permease component	-	-	-	ko:K02004	-	M00258	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	FtsX,MacB_PCD
BYD3_k127_944619_6	1120968.AUBX01000009_gene432	2.36e-73	251.0	COG0726@1|root,COG0726@2|Bacteria,4NMJP@976|Bacteroidetes,47PNJ@768503|Cytophagia	976|Bacteroidetes	G	Polysaccharide deacetylase	-	-	-	-	-	-	-	-	-	-	-	-	Polysacc_deac_1
BYD3_k127_944619_0	1122176.KB903532_gene2580	8.97e-151	488.0	COG0531@1|root,COG0531@2|Bacteria,4NIZB@976|Bacteroidetes,1IP7H@117747|Sphingobacteriia	976|Bacteroidetes	E	PFAM Amino acid	-	-	-	ko:K03294,ko:K03758	-	-	-	-	ko00000,ko02000	2.A.3.2	-	-	AA_permease_2
BYD3_k127_944619_3	391603.FBALC1_01942	7.429e-124	403.0	COG1834@1|root,COG1834@2|Bacteria,4NGKJ@976|Bacteroidetes,1I0NU@117743|Flavobacteriia	976|Bacteroidetes	E	Amidinotransferase	-	-	-	-	-	-	-	-	-	-	-	-	Amidinotransf
BYD3_k127_944619_1	1347086.CCBA010000009_gene1321	8.4e-149	479.0	COG0329@1|root,COG0329@2|Bacteria,1UNIU@1239|Firmicutes,4HAWE@91061|Bacilli,1ZFAE@1386|Bacillus	91061|Bacilli	EM	Dihydrodipicolinate synthetase family	-	-	-	-	-	-	-	-	-	-	-	-	DHDPS
BYD3_k127_944619_2	485917.Phep_1690	2.186e-131	430.0	COG0451@1|root,COG0451@2|Bacteria,4NGEH@976|Bacteroidetes,1IRSH@117747|Sphingobacteriia	976|Bacteroidetes	GM	ADP-glyceromanno-heptose 6-epimerase activity	-	-	-	-	-	-	-	-	-	-	-	-	Epimerase
BYD3_k127_944619_4	926556.Echvi_1915	1.813e-87	300.0	COG0561@1|root,COG0561@2|Bacteria,4NICE@976|Bacteroidetes,47P96@768503|Cytophagia	976|Bacteroidetes	S	TIGRFAM Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily	-	-	-	-	-	-	-	-	-	-	-	-	Hydrolase_3
BYD3_k127_944619_5	1408473.JHXO01000009_gene3310	3.23e-76	271.0	COG0612@1|root,COG0612@2|Bacteria,4NHQP@976|Bacteroidetes	976|Bacteroidetes	S	Peptidase M16 inactive domain	-	-	-	-	-	-	-	-	-	-	-	-	Peptidase_M16,Peptidase_M16_C
BYD3_k127_953608_0	1124780.ANNU01000050_gene2104	3.248e-264	825.0	COG2274@1|root,COG2274@2|Bacteria,4NE19@976|Bacteroidetes,47JYM@768503|Cytophagia	976|Bacteroidetes	V	ABC transporter transmembrane region	-	-	-	ko:K20344	ko02010,ko02024,map02010,map02024	-	-	-	ko00000,ko00001,ko02000	3.A.1.112	-	-	ABC_membrane,ABC_tran,Peptidase_C39
BYD3_k127_953608_1	1124780.ANNU01000050_gene2103	3.161e-82	287.0	COG0845@1|root,COG0845@2|Bacteria,4NI1E@976|Bacteroidetes,47K6P@768503|Cytophagia	976|Bacteroidetes	M	Barrel-sandwich domain of CusB or HlyD membrane-fusion	-	-	-	ko:K20345	ko02024,map02024	-	-	-	ko00000,ko00001,ko02000	3.A.1.112,8.A.1	-	-	Biotin_lipoyl_2,HlyD_3
BYD3_k127_953608_5	925409.KI911562_gene402	1.107e-10	68.0	2EQFM@1|root,33I1M@2|Bacteria,4NZD7@976|Bacteroidetes	976|Bacteroidetes	S	CAAX protease self-immunity	-	-	-	-	-	-	-	-	-	-	-	-	Abi
BYD3_k127_953608_3	1095769.CAHF01000006_gene1947	3.975e-13	76.0	COG5528@1|root,COG5528@2|Bacteria,1RF9N@1224|Proteobacteria	1224|Proteobacteria	S	Predicted integral membrane protein (DUF2269)	mchD	-	-	-	-	-	-	-	-	-	-	-	DUF2269
BYD3_k127_953608_2	479433.Caci_5799	3.206e-17	93.0	COG0793@1|root,COG0793@2|Bacteria,2GN4H@201174|Actinobacteria	201174|Actinobacteria	M	Peptidase family S41	-	-	-	-	-	-	-	-	-	-	-	-	Peptidase_S41,Tricorn_C1
BYD3_k127_970082_3	211165.AJLN01000104_gene6547	8.362e-43	164.0	COG3437@1|root,COG3829@1|root,COG5002@1|root,COG3437@2|Bacteria,COG3829@2|Bacteria,COG5002@2|Bacteria,1FZYQ@1117|Cyanobacteria,1JHAP@1189|Stigonemataceae	1117|Cyanobacteria	T	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)	-	-	-	-	-	-	-	-	-	-	-	-	CHASE,GAF,GAF_2,HATPase_c,HisKA,PAS,PAS_3,PAS_8,PAS_9,Response_reg
BYD3_k127_970082_2	1158294.JOMI01000009_gene886	1.57e-85	290.0	COG0566@1|root,COG0566@2|Bacteria,4NEFJ@976|Bacteroidetes,2FRCP@200643|Bacteroidia	976|Bacteroidetes	J	SpoU rRNA Methylase family	spoU	-	-	ko:K03437	-	-	-	-	ko00000,ko03016	-	-	-	SpoU_methylase,SpoU_sub_bind
BYD3_k127_970082_1	1279009.ADICEAN_04205	1.571e-112	370.0	COG1092@1|root,COG1092@2|Bacteria,4NGJX@976|Bacteroidetes,47MFA@768503|Cytophagia	976|Bacteroidetes	J	S-adenosylmethionine-dependent methyltransferase	-	-	2.1.1.191	ko:K06969	-	-	-	-	ko00000,ko01000,ko03009	-	-	-	Methyltrans_SAM
BYD3_k127_970082_4	714943.Mucpa_3906	7.155e-34	137.0	COG4636@1|root,COG4636@2|Bacteria,4NV5A@976|Bacteroidetes,1J0EP@117747|Sphingobacteriia	976|Bacteroidetes	S	InterPro IPR008538	-	-	-	-	-	-	-	-	-	-	-	-	Uma2
BYD3_k127_970082_0	1094466.KQS_09625	4.754e-298	923.0	COG1217@1|root,COG1217@2|Bacteria,4NDVM@976|Bacteroidetes,1HY43@117743|Flavobacteriia,2NS79@237|Flavobacterium	976|Bacteroidetes	T	GTP-binding protein TypA	typA	-	-	ko:K06207	-	-	-	-	ko00000	-	-	-	EFG_C,GTP_EFTU,GTP_EFTU_D2
BYD3_k127_970409_7	760192.Halhy_1401	1.708e-09	69.0	28J4T@1|root,2Z90P@2|Bacteria,4NHUC@976|Bacteroidetes	976|Bacteroidetes	S	Domain of unknown function (DUF4270)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4270
BYD3_k127_970409_0	1237149.C900_04466	5.031e-142	454.0	COG0297@1|root,COG0297@2|Bacteria,4NFP8@976|Bacteroidetes,47KUD@768503|Cytophagia	976|Bacteroidetes	G	PFAM Starch synthase catalytic domain	glgA	-	2.4.1.21	ko:K00703	ko00500,ko01100,ko01110,ko02026,map00500,map01100,map01110,map02026	M00565	R02421	RC00005	ko00000,ko00001,ko00002,ko01000,ko01003	-	GT5	-	Glyco_transf_5
BYD3_k127_970409_1	1313301.AUGC01000001_gene1621	1.919e-90	306.0	COG0414@1|root,COG0414@2|Bacteria,4NFT9@976|Bacteroidetes	976|Bacteroidetes	H	Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate	panC	GO:0003674,GO:0003824,GO:0004592,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006573,GO:0006575,GO:0006732,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009081,GO:0009108,GO:0009110,GO:0009987,GO:0015939,GO:0015940,GO:0016053,GO:0016874,GO:0016879,GO:0016881,GO:0019752,GO:0032787,GO:0033317,GO:0034641,GO:0042364,GO:0042398,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0051186,GO:0051188,GO:0071704,GO:0072330,GO:1901564,GO:1901566,GO:1901576,GO:1901605	6.3.2.1	ko:K01918	ko00410,ko00770,ko01100,ko01110,map00410,map00770,map01100,map01110	M00119	R02473	RC00096,RC00141	ko00000,ko00001,ko00002,ko01000	-	-	-	Pantoate_ligase
BYD3_k127_970409_4	1237149.C900_04464	2.092e-57	201.0	COG0853@1|root,COG0853@2|Bacteria,4NQ42@976|Bacteroidetes,47QA8@768503|Cytophagia	976|Bacteroidetes	H	Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine	panD	-	4.1.1.11	ko:K01579	ko00410,ko00770,ko01100,ko01110,map00410,map00770,map01100,map01110	M00119	R00489	RC00299	ko00000,ko00001,ko00002,ko01000	-	-	-	Asp_decarbox
BYD3_k127_970409_2	1237149.C900_04463	1.826e-86	297.0	COG0392@1|root,COG0392@2|Bacteria,4NGPD@976|Bacteroidetes,47JZY@768503|Cytophagia	976|Bacteroidetes	S	PFAM Uncharacterised protein family (UPF0104)	-	-	-	ko:K07027	-	-	-	-	ko00000,ko02000	4.D.2	-	-	LPG_synthase_TM
BYD3_k127_970409_5	388413.ALPR1_00065	1.509e-21	105.0	28M3Z@1|root,32ZEY@2|Bacteria,4NUZS@976|Bacteroidetes,47SGM@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_970409_3	1237149.C900_01023	4.82e-81	278.0	COG0382@1|root,COG0382@2|Bacteria,4NGNA@976|Bacteroidetes,47MCK@768503|Cytophagia	976|Bacteroidetes	H	PFAM UbiA prenyltransferase	ubiA	-	2.5.1.39	ko:K03179	ko00130,ko01100,ko01110,map00130,map01100,map01110	M00117	R05000,R05615	RC00209,RC02895	ko00000,ko00001,ko00002,ko01000,ko01006	-	-	-	UbiA
BYD3_k127_970409_6	509635.N824_06620	1.093e-14	80.0	COG0299@1|root,COG0299@2|Bacteria,4NNZP@976|Bacteroidetes,1IVNS@117747|Sphingobacteriia	976|Bacteroidetes	F	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate	purN	-	2.1.2.2	ko:K11175	ko00230,ko00670,ko01100,ko01110,ko01130,map00230,map00670,map01100,map01110,map01130	M00048	R04325,R04326	RC00026,RC00197,RC01128	ko00000,ko00001,ko00002,ko01000	-	-	-	Formyl_trans_N
BYD3_k127_988791_2	1123277.KB893195_gene5653	5.083e-74	252.0	COG1904@1|root,COG1904@2|Bacteria,4NFHS@976|Bacteroidetes,47KAP@768503|Cytophagia	976|Bacteroidetes	G	Glucuronate isomerase	uxaC	-	5.3.1.12	ko:K01812	ko00040,ko01100,map00040,map01100	M00061,M00631	R01482,R01983	RC00376	ko00000,ko00001,ko00002,ko01000	-	-	-	UxaC
BYD3_k127_988791_0	926549.KI421517_gene3709	1.062e-230	721.0	COG0673@1|root,COG0673@2|Bacteria,4NHDS@976|Bacteroidetes,47K92@768503|Cytophagia	976|Bacteroidetes	S	Oxidoreductase family, NAD-binding Rossmann fold	-	-	-	-	-	-	-	-	-	-	-	-	GFO_IDH_MocA,GFO_IDH_MocA_C
BYD3_k127_988791_1	925409.KI911562_gene1384	7.546e-185	585.0	COG1082@1|root,COG2152@1|root,COG1082@2|Bacteria,COG2152@2|Bacteria,4NGDZ@976|Bacteroidetes,1IQ4Y@117747|Sphingobacteriia	976|Bacteroidetes	G	Domain of Unknown Function (DUF1080)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1080
BYD3_k127_99583_6	929556.Solca_2785	3.954e-19	95.0	2C7HJ@1|root,31BFZ@2|Bacteria,4NRGQ@976|Bacteroidetes,1IXYY@117747|Sphingobacteriia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	OMP_b-brl
BYD3_k127_99583_4	926549.KI421517_gene948	2.229e-64	237.0	COG0628@1|root,COG0628@2|Bacteria,4NFB2@976|Bacteroidetes,47N6Y@768503|Cytophagia	976|Bacteroidetes	S	AI-2E family transporter	-	-	-	-	-	-	-	-	-	-	-	-	AI-2E_transport
BYD3_k127_99583_1	531844.FIC_01707	6.229e-118	391.0	COG0189@1|root,COG0189@2|Bacteria,4NH4U@976|Bacteroidetes,1HZ4Y@117743|Flavobacteriia	976|Bacteroidetes	HJ	ligase activity	-	-	-	-	-	-	-	-	-	-	-	-	RimK
BYD3_k127_99583_3	926549.KI421517_gene1069	5.1e-74	255.0	COG3403@1|root,COG3403@2|Bacteria,4NH39@976|Bacteroidetes,47QY8@768503|Cytophagia	976|Bacteroidetes	S	YqcI/YcgG family	-	-	-	ko:K09190	-	-	-	-	ko00000	-	-	-	YqcI_YcgG
BYD3_k127_99583_2	1121287.AUMU01000013_gene555	2.399e-91	304.0	COG3665@1|root,COG3665@2|Bacteria,4NGIF@976|Bacteroidetes,1HYFG@117743|Flavobacteriia,3ZS3S@59732|Chryseobacterium	976|Bacteroidetes	S	Domain of unknown function (DUF1989)	-	-	-	ko:K09967	-	-	-	-	ko00000	-	-	-	DUF1989
BYD3_k127_99583_0	1270193.JARP01000002_gene697	9.588e-229	722.0	COG4805@1|root,COG4805@2|Bacteria,4NFAK@976|Bacteroidetes,1HXAT@117743|Flavobacteriia,2NV5I@237|Flavobacterium	976|Bacteroidetes	S	Bacterial protein of unknown function (DUF885)	-	-	-	-	-	-	-	-	-	-	-	-	DUF885
BYD3_k127_99583_7	1038862.KB893805_gene4026	5.234e-06	54.0	COG4319@1|root,COG4319@2|Bacteria,1RF3Q@1224|Proteobacteria,2U78H@28211|Alphaproteobacteria,3JZ1D@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	SnoaL-like domain	-	-	-	-	-	-	-	-	-	-	-	-	DUF4440
BYD3_k127_99583_5	1123057.P872_24425	5.788e-38	146.0	COG1621@1|root,COG1621@2|Bacteria,4NEYI@976|Bacteroidetes,47KIP@768503|Cytophagia	976|Bacteroidetes	G	Belongs to the glycosyl hydrolase 32 family	-	-	3.2.1.80	ko:K03332	ko00051,map00051	-	R00879	-	ko00000,ko00001,ko01000	-	-	-	Glyco_hydro_32C,Glyco_hydro_32N
BYD3_k127_999954_4	761193.Runsl_0059	1.446e-59	211.0	COG0738@1|root,COG0738@2|Bacteria,4NFHM@976|Bacteroidetes,47JNK@768503|Cytophagia	976|Bacteroidetes	G	PFAM Major Facilitator Superfamily	-	-	-	-	-	-	-	-	-	-	-	-	MFS_1
BYD3_k127_999954_7	1492737.FEM08_31030	5.62e-12	77.0	COG0457@1|root,COG0457@2|Bacteria,4NGN5@976|Bacteroidetes	976|Bacteroidetes	S	tetratricopeptide repeat	-	-	-	-	-	-	-	-	-	-	-	-	TPR_16,TPR_17,TPR_2,TPR_8,gag-asp_proteas
BYD3_k127_999954_3	1237149.C900_01882	7.552e-75	266.0	COG2885@1|root,COG2885@2|Bacteria	2|Bacteria	M	chlorophyll binding	-	-	-	-	-	-	-	-	-	-	-	-	OmpA
BYD3_k127_999954_2	1124780.ANNU01000021_gene3030	2.393e-106	353.0	COG1215@1|root,COG1215@2|Bacteria,4PKBU@976|Bacteroidetes,47MX1@768503|Cytophagia	976|Bacteroidetes	M	PFAM Glycosyl transferase family 2	-	-	-	-	-	-	-	-	-	-	-	-	Glyco_trans_2_3,Glycos_transf_2
BYD3_k127_999954_1	1237149.C900_05601	7.196e-147	471.0	COG1215@1|root,COG1215@2|Bacteria,4PKF3@976|Bacteroidetes,47XY0@768503|Cytophagia	976|Bacteroidetes	M	glycosyl transferase family 2	-	-	-	-	-	-	-	-	-	-	-	-	Glycos_transf_2
BYD3_k127_999954_5	1237149.C900_05600	4.189e-33	134.0	2DM6B@1|root,31WK9@2|Bacteria,4NQK1@976|Bacteroidetes,47QS1@768503|Cytophagia	976|Bacteroidetes	S	Protein of unknown function (DUF4199)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4199
BYD3_k127_999954_0	1237149.C900_05598	1.729e-162	521.0	COG0044@1|root,COG0044@2|Bacteria,4NDUZ@976|Bacteroidetes,47KKP@768503|Cytophagia	976|Bacteroidetes	F	TIGRFAM dihydroorotase, multifunctional complex type	pyrC	-	3.5.2.3	ko:K01465	ko00240,ko01100,map00240,map01100	M00051	R01993	RC00632	ko00000,ko00001,ko00002,ko01000	-	-	-	Amidohydro_1
## 4911 queries scanned
## Total time (seconds): 7.710677146911621
## Rate: 636.91 q/s