## Fri Dec 12 22:21:20 2025
## emapper-2.1.13
## /data/anaconda3/envs/eggnog-mapper/bin/emapper.py -i /data/result/bins/wyx/qs/new/BYD3_bin.40.fa -m mmseqs --itype genome -o BYD3_bin.40 --output_dir /data/result/bins/wyx/egg/BYD3_bin.40 --cpu 32
##
#query	seed_ortholog	evalue	score	eggNOG_OGs	max_annot_lvl	COG_category	Description	Preferred_name	GOs	EC	KEGG_ko	KEGG_Pathway	KEGG_Module	KEGG_Reaction	KEGG_rclass	BRITE	KEGG_TC	CAZy	BiGG_Reaction	PFAMs
BYD3_k127_1022811_4	82995.CR62_02200	1.017e-10	64.0	COG1349@1|root,COG1349@2|Bacteria,1MV49@1224|Proteobacteria,1RRR5@1236|Gammaproteobacteria,400UJ@613|Serratia	1236|Gammaproteobacteria	K	Transcriptional regulator	glpR_2	-	-	-	-	-	-	-	-	-	-	-	DeoRC,HTH_DeoR
BYD3_k127_1022811_0	485918.Cpin_1810	0.0	1026.0	COG3250@1|root,COG3250@2|Bacteria,4PHX1@976|Bacteroidetes,1IRK0@117747|Sphingobacteriia	976|Bacteroidetes	G	glycoside hydrolase family 2 sugar binding	-	-	-	-	-	-	-	-	-	-	-	-	DUF4982,Glyco_hydro_2,Glyco_hydro_2_C,Glyco_hydro_2_N
BYD3_k127_1022811_1	1408473.JHXO01000011_gene3201	3.914e-163	523.0	COG3579@1|root,COG3579@2|Bacteria,4NE02@976|Bacteroidetes	976|Bacteroidetes	E	Peptidase C1-like family	-	-	3.4.22.40	ko:K01372	-	-	-	-	ko00000,ko01000,ko01002	-	-	-	Peptidase_C1,Peptidase_C1_2
BYD3_k127_1022811_2	869213.JCM21142_385	2.663e-83	282.0	COG3298@1|root,COG3298@2|Bacteria,4NECH@976|Bacteroidetes,47Y3D@768503|Cytophagia	976|Bacteroidetes	L	Predicted 3'-5' exonuclease related to the exonuclease domain of PolB	-	-	-	ko:K07501	-	-	-	-	ko00000	-	-	-	DNA_pol_B_exo2
BYD3_k127_1022811_3	1408473.JHXO01000005_gene1519	9.521e-64	222.0	COG1482@1|root,COG1482@2|Bacteria,4NF9A@976|Bacteroidetes,2FN4I@200643|Bacteroidia	976|Bacteroidetes	G	mannose-6-phosphate isomerase	manA	-	5.3.1.8	ko:K01809	ko00051,ko00520,ko01100,ko01110,ko01130,map00051,map00520,map01100,map01110,map01130	M00114	R01819	RC00376	ko00000,ko00001,ko00002,ko01000	-	-	-	PMI_typeI
BYD3_k127_1063283_10	1461577.CCMH01000004_gene1173	7.489e-14	79.0	COG3468@1|root,COG3468@2|Bacteria,4NU7E@976|Bacteroidetes,1IKEV@117743|Flavobacteriia	976|Bacteroidetes	MU	COG NOG29365 non supervised orthologous group	-	-	-	-	-	-	-	-	-	-	-	-	OMP_b-brl
BYD3_k127_1063283_5	1408473.JHXO01000001_gene2179	4.065e-138	452.0	COG0738@1|root,COG0738@2|Bacteria,4NEYR@976|Bacteroidetes,2FQZY@200643|Bacteroidia	976|Bacteroidetes	G	Major Facilitator Superfamily	-	-	-	ko:K02429	-	-	-	-	ko00000,ko02000	2.A.1.7	-	-	MFS_1
BYD3_k127_1063283_8	1144275.COCOR_05004	1.187e-83	287.0	COG0685@1|root,COG0685@2|Bacteria,1MUC9@1224|Proteobacteria,42P5X@68525|delta/epsilon subdivisions,2WIQW@28221|Deltaproteobacteria	28221|Deltaproteobacteria	E	PFAM Methylenetetrahydrofolate reductase	metF	-	1.5.1.20	ko:K00297	ko00670,ko00720,ko01100,ko01120,ko01200,ko01523,map00670,map00720,map01100,map01120,map01200,map01523	M00377	R01224,R07168	RC00081	ko00000,ko00001,ko00002,ko01000	-	-	-	MTHFR
BYD3_k127_1063283_0	1168034.FH5T_06675	0.0	1586.0	COG0646@1|root,COG1410@1|root,COG0646@2|Bacteria,COG1410@2|Bacteria,4NFRF@976|Bacteroidetes,2FMI7@200643|Bacteroidia	976|Bacteroidetes	E	5-methyltetrahydrofolate--homocysteine methyltransferase	metH	-	2.1.1.13	ko:K00548	ko00270,ko00450,ko00670,ko01100,ko01110,ko01230,map00270,map00450,map00670,map01100,map01110,map01230	M00017	R00946,R09365	RC00035,RC00113,RC01241	ko00000,ko00001,ko00002,ko01000	-	-	-	B12-binding,B12-binding_2,Met_synt_B12,Pterin_bind,S-methyl_trans
BYD3_k127_1063283_1	1191523.MROS_0619	1.544e-259	813.0	COG1022@1|root,COG1022@2|Bacteria	2|Bacteria	I	Amp-dependent synthetase and ligase	-	-	6.2.1.3	ko:K01897	ko00061,ko00071,ko01100,ko01212,ko02024,ko03320,ko04146,ko04216,ko04714,ko04920,map00061,map00071,map01100,map01212,map02024,map03320,map04146,map04216,map04714,map04920	M00086	R01280	RC00004,RC00014	ko00000,ko00001,ko00002,ko01000,ko01004,ko04147	4.C.1.1	-	-	AMP-binding
BYD3_k127_1063283_9	1408473.JHXO01000009_gene3425	4.219e-27	115.0	COG5002@1|root,COG5002@2|Bacteria,4PKV1@976|Bacteroidetes,2G0ES@200643|Bacteroidia	976|Bacteroidetes	T	PAS fold	-	-	-	-	-	-	-	-	-	-	-	-	HATPase_c,HisKA,PAS,PAS_3,PAS_4,PAS_9,Response_reg
BYD3_k127_1063283_4	1408473.JHXO01000001_gene2526	1.287e-183	581.0	COG0626@1|root,COG0626@2|Bacteria,4PKE6@976|Bacteroidetes,2G3E3@200643|Bacteroidia	976|Bacteroidetes	E	Catalyzes the formation of methanethiol and 2-ocobutanoate from L-methionine	megL	-	4.4.1.11,4.4.1.8	ko:K01760,ko:K01761	ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230	M00017	R00654,R00782,R01286,R02408,R04770,R04941	RC00056,RC00069,RC00196,RC00348,RC00382,RC00488,RC00710,RC01209,RC01210,RC01245,RC02303	ko00000,ko00001,ko00002,ko01000	-	-	-	Cys_Met_Meta_PP
BYD3_k127_1063283_7	621372.ACIH01000143_gene208	1.757e-85	286.0	COG1225@1|root,COG1225@2|Bacteria,1V058@1239|Firmicutes,4HE2H@91061|Bacilli,26T9E@186822|Paenibacillaceae	91061|Bacilli	O	Redoxin	-	-	-	-	-	-	-	-	-	-	-	-	AhpC-TSA,Redoxin
BYD3_k127_1063283_6	869213.JCM21142_73065	3.967e-105	350.0	COG0167@1|root,COG0167@2|Bacteria,4NGSB@976|Bacteroidetes,47U8D@768503|Cytophagia	976|Bacteroidetes	F	Catalyzes the conversion of dihydroorotate to orotate	-	-	1.3.1.1,1.3.98.1	ko:K00226,ko:K17723	ko00240,ko00410,ko00770,ko01100,map00240,map00410,map00770,map01100	M00046,M00051	R00977,R01414,R01867,R11026	RC00051,RC00072,RC00123	ko00000,ko00001,ko00002,ko01000	-	-	-	DHO_dh,Fer4_21
BYD3_k127_1063283_11	688270.Celal_1527	6.446e-05	52.0	COG3087@1|root,COG3087@2|Bacteria,4NF9U@976|Bacteroidetes,1HYQM@117743|Flavobacteriia,1F8QQ@104264|Cellulophaga	976|Bacteroidetes	D	Sporulation related domain	-	-	-	-	-	-	-	-	-	-	-	-	SPOR
BYD3_k127_1063283_3	204669.Acid345_1623	8.851e-187	590.0	COG0205@1|root,COG0205@2|Bacteria,3Y4A9@57723|Acidobacteria,2JKQ8@204432|Acidobacteriia	204432|Acidobacteriia	G	Phosphofructokinase	-	-	2.7.1.11,2.7.1.90	ko:K21071	ko00010,ko00030,ko00051,ko00052,ko00680,ko01100,ko01110,ko01120,ko01130,map00010,map00030,map00051,map00052,map00680,map01100,map01110,map01120,map01130	-	R00756,R00764,R02073,R03236,R04779	RC00002,RC00017	ko00000,ko00001,ko01000	-	-	-	PFK
BYD3_k127_1063283_2	929713.NIASO_05310	4.588e-190	601.0	COG0205@1|root,COG0205@2|Bacteria,4NIKT@976|Bacteroidetes,1IUVG@117747|Sphingobacteriia	976|Bacteroidetes	G	Phosphofructokinase	pfp	-	2.7.1.11,2.7.1.90	ko:K00895,ko:K21071	ko00010,ko00030,ko00051,ko00052,ko00680,ko01100,ko01110,ko01120,ko01130,map00010,map00030,map00051,map00052,map00680,map01100,map01110,map01120,map01130	-	R00756,R00764,R02073,R03236,R04779	RC00002,RC00017	ko00000,ko00001,ko01000	-	-	-	PFK
BYD3_k127_1105111_2	886379.AEWI01000014_gene1472	7.675e-103	345.0	COG0142@1|root,COG0142@2|Bacteria,4NET2@976|Bacteroidetes,2FMMI@200643|Bacteroidia,3XJ8F@558415|Marinilabiliaceae	976|Bacteroidetes	H	Polyprenyl synthetase	ispB	-	2.5.1.90	ko:K02523	ko00900,ko01110,map00900,map01110	-	R09248	RC00279	ko00000,ko00001,ko01000,ko01006	-	-	-	polyprenyl_synt
BYD3_k127_1105111_1	385682.AFSL01000060_gene1802	3.65e-215	684.0	COG0322@1|root,COG0322@2|Bacteria,4NE61@976|Bacteroidetes,2FNW9@200643|Bacteroidia,3XJXG@558415|Marinilabiliaceae	976|Bacteroidetes	L	GIY-YIG type nucleases (URI domain)	uvrC	GO:0005575,GO:0005622,GO:0005623,GO:0006950,GO:0006974,GO:0008150,GO:0009380,GO:0009987,GO:0032991,GO:0033554,GO:0044424,GO:0044464,GO:0050896,GO:0051716,GO:1902494,GO:1905347,GO:1905348,GO:1990391	-	ko:K03703	ko03420,map03420	-	-	-	ko00000,ko00001,ko03400	-	-	-	GIY-YIG,HHH_2,HHH_5,UVR,UvrC_HhH_N
BYD3_k127_1105111_0	1185876.BN8_05981	1.711e-238	752.0	COG0445@1|root,COG0445@2|Bacteria,4NFNH@976|Bacteroidetes,47JCG@768503|Cytophagia	976|Bacteroidetes	D	NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34	gidA	GO:0000166,GO:0001510,GO:0002097,GO:0002098,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0048037,GO:0050660,GO:0050662,GO:0071704,GO:0090304,GO:0097159,GO:1901265,GO:1901360,GO:1901363	-	ko:K03495	-	-	R08701	RC00053,RC00209,RC00870	ko00000,ko03016,ko03036	-	-	-	GIDA,GIDA_assoc
BYD3_k127_1105111_3	869213.JCM21142_409	1.558e-18	87.0	COG0319@1|root,COG0319@2|Bacteria,4NS93@976|Bacteroidetes,47Q9Q@768503|Cytophagia	976|Bacteroidetes	S	Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA	ybeY	-	-	-	-	-	-	-	-	-	-	-	UPF0054
BYD3_k127_1114307_10	927658.AJUM01000037_gene2301	2.858e-37	151.0	COG3291@1|root,COG3291@2|Bacteria,4P5RR@976|Bacteroidetes,2G25G@200643|Bacteroidia,3XJXF@558415|Marinilabiliaceae	976|Bacteroidetes	S	C-terminal domain of CHU protein family	-	-	-	-	-	-	-	-	-	-	-	-	CHU_C
BYD3_k127_1114307_9	391603.FBALC1_10967	3.499e-44	173.0	COG3064@1|root,COG3064@2|Bacteria,4NEVD@976|Bacteroidetes,1HWKC@117743|Flavobacteriia	976|Bacteroidetes	M	membrane	-	-	-	-	-	-	-	-	-	-	-	-	PorP_SprF
BYD3_k127_1114307_8	869213.JCM21142_282	4.316e-93	323.0	COG0823@1|root,COG3291@1|root,COG0823@2|Bacteria,COG3291@2|Bacteria,4P0F7@976|Bacteroidetes	976|Bacteroidetes	U	Cell envelope biogenesis protein OmpA	-	-	-	-	-	-	-	-	-	-	-	-	PD40,TPR_19
BYD3_k127_1114307_5	869213.JCM21142_281	2.363e-116	384.0	COG3291@1|root,COG3291@2|Bacteria,4NHJJ@976|Bacteroidetes,47U4K@768503|Cytophagia	976|Bacteroidetes	S	Pkd domain containing protein	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_1114307_2	385682.AFSL01000024_gene2061	1.624e-186	621.0	COG2208@1|root,COG3292@1|root,COG2208@2|Bacteria,COG3292@2|Bacteria,4NKGA@976|Bacteroidetes,2G0DG@200643|Bacteroidia,3XJHT@558415|Marinilabiliaceae	976|Bacteroidetes	KT	Sigma factor PP2C-like phosphatases	-	-	-	-	-	-	-	-	-	-	-	-	HATPase_c,HisKA,Reg_prop,SpoIIE,Y_Y_Y
BYD3_k127_1114307_7	1122978.AUFP01000010_gene262	5.661e-106	349.0	COG1187@1|root,COG1187@2|Bacteria,4NEE1@976|Bacteroidetes,2FP7M@200643|Bacteroidia	976|Bacteroidetes	J	Belongs to the pseudouridine synthase RsuA family	rluB	-	5.4.99.22	ko:K06178	-	-	-	-	ko00000,ko01000,ko03009	-	-	-	PseudoU_synth_2,S4
BYD3_k127_1114307_0	1168289.AJKI01000056_gene3083	3.847e-191	606.0	COG1109@1|root,COG1109@2|Bacteria,4NG3H@976|Bacteroidetes,2FM6E@200643|Bacteroidia,3XJEW@558415|Marinilabiliaceae	976|Bacteroidetes	G	Phosphoglucomutase/phosphomannomutase, C-terminal domain	glmM	-	5.4.2.8	ko:K01840	ko00051,ko00520,ko01100,ko01110,ko01130,map00051,map00520,map01100,map01110,map01130	M00114	R01818	RC00408	ko00000,ko00001,ko00002,ko01000	-	-	-	PGM_PMM_I,PGM_PMM_II,PGM_PMM_III,PGM_PMM_IV
BYD3_k127_1114307_4	1121904.ARBP01000001_gene5529	1.871e-154	517.0	COG3203@1|root,COG3203@2|Bacteria,4PKUC@976|Bacteroidetes,47YNV@768503|Cytophagia	976|Bacteroidetes	M	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane	-	-	-	-	-	-	-	-	-	-	-	-	CarbopepD_reg_2
BYD3_k127_1114307_6	445970.ALIPUT_01772	4.175e-114	374.0	COG1159@1|root,COG1159@2|Bacteria,4NES2@976|Bacteroidetes,2FN64@200643|Bacteroidia,22U2W@171550|Rikenellaceae	976|Bacteroidetes	S	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism	era	-	-	ko:K03595	-	-	-	-	ko00000,ko03009,ko03029	-	-	-	KH_2,MMR_HSR1
BYD3_k127_1114307_11	444158.MmarC6_1768	1.081e-22	101.0	arCOG05108@1|root,arCOG05108@2157|Archaea,2Y05F@28890|Euryarchaeota,23RQW@183939|Methanococci	183939|Methanococci	S	PFAM Stress responsive alpha-beta barrel domain protein	-	-	-	-	-	-	-	-	-	-	-	-	Dabb
BYD3_k127_1114307_1	869213.JCM21142_102	1.187e-186	591.0	COG1160@1|root,COG1160@2|Bacteria,4NE2J@976|Bacteroidetes,47K6M@768503|Cytophagia	976|Bacteroidetes	S	GTPase that plays an essential role in the late steps of ribosome biogenesis	der	-	-	ko:K03977	-	-	-	-	ko00000,ko03009	-	-	-	KH_dom-like,MMR_HSR1
BYD3_k127_1114307_3	1408473.JHXO01000006_gene1037	4.416e-166	545.0	COG2885@1|root,COG2885@2|Bacteria,4NE6G@976|Bacteroidetes,2FPQX@200643|Bacteroidia	976|Bacteroidetes	MU	Belongs to the ompA family	-	-	-	ko:K03640	-	-	-	-	ko00000,ko02000	2.C.1.2	-	-	CarboxypepD_reg,OmpA,PD40
BYD3_k127_1123666_8	582515.KR51_00008170	4.188e-35	139.0	COG0156@1|root,COG0156@2|Bacteria,1G3P5@1117|Cyanobacteria	1117|Cyanobacteria	H	aminotransferase class I and II	-	-	-	-	-	-	-	-	-	-	-	-	AMP-binding,Aminotran_1_2,PP-binding
BYD3_k127_1123666_0	1408473.JHXO01000011_gene3043	1.11e-216	689.0	COG1022@1|root,COG1022@2|Bacteria,4NEA4@976|Bacteroidetes,2FNK9@200643|Bacteroidia	976|Bacteroidetes	I	AMP-binding enzyme	fadD	-	6.2.1.3	ko:K01897	ko00061,ko00071,ko01100,ko01212,ko02024,ko03320,ko04146,ko04216,ko04714,ko04920,map00061,map00071,map01100,map01212,map02024,map03320,map04146,map04216,map04714,map04920	M00086	R01280	RC00004,RC00014	ko00000,ko00001,ko00002,ko01000,ko01004,ko04147	4.C.1.1	-	-	AMP-binding
BYD3_k127_1123666_2	1121129.KB903367_gene2648	9.839e-128	415.0	COG0549@1|root,COG0549@2|Bacteria,4NITW@976|Bacteroidetes,2FNTV@200643|Bacteroidia,22ZFV@171551|Porphyromonadaceae	976|Bacteroidetes	E	Amino acid kinase family	-	-	2.7.2.2	ko:K00926	ko00220,ko00230,ko00910,ko01100,ko01120,ko01200,map00220,map00230,map00910,map01100,map01120,map01200	-	R00150,R01395	RC00002,RC00043,RC02803,RC02804	ko00000,ko00001,ko01000	-	-	-	AA_kinase
BYD3_k127_1123666_6	869213.JCM21142_73060	1.591e-84	291.0	COG1388@1|root,COG1705@1|root,COG1388@2|Bacteria,COG1705@2|Bacteria,4NEER@976|Bacteroidetes,47WJ6@768503|Cytophagia	976|Bacteroidetes	NU	Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase	lytG	-	3.2.1.96	ko:K01227	ko00511,map00511	-	-	-	ko00000,ko00001,ko01000	-	-	-	Glucosaminidase,LysM
BYD3_k127_1123666_4	411479.BACUNI_03291	6.475e-110	364.0	COG0223@1|root,COG0223@2|Bacteria,4NE8U@976|Bacteroidetes,2FN5I@200643|Bacteroidia,4AK9U@815|Bacteroidaceae	976|Bacteroidetes	J	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus	fmt	GO:0003674,GO:0003824,GO:0004479,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006412,GO:0006413,GO:0006464,GO:0006518,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016741,GO:0016742,GO:0019538,GO:0019988,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0036211,GO:0043043,GO:0043170,GO:0043412,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0046483,GO:0071704,GO:0071951,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576	2.1.2.9	ko:K00604	ko00670,ko00970,map00670,map00970	-	R03940	RC00026,RC00165	ko00000,ko00001,ko01000	-	-	-	Formyl_trans_C,Formyl_trans_N
BYD3_k127_1123666_1	385682.AFSL01000095_gene818	1.045e-192	610.0	COG0108@1|root,COG0807@1|root,COG0108@2|Bacteria,COG0807@2|Bacteria,4NF6I@976|Bacteroidetes,2FNS0@200643|Bacteroidia,3XJFZ@558415|Marinilabiliaceae	976|Bacteroidetes	H	GTP cyclohydrolase II	ribBA	-	3.5.4.25,4.1.99.12	ko:K14652	ko00740,ko00790,ko01100,ko01110,map00740,map00790,map01100,map01110	M00125,M00840	R00425,R07281	RC00293,RC01792,RC01815,RC02504	ko00000,ko00001,ko00002,ko01000	-	-	-	DHBP_synthase,GTP_cyclohydro2
BYD3_k127_1123666_3	1453505.JASY01000001_gene3281	3.069e-122	403.0	COG1215@1|root,COG1215@2|Bacteria,4NEG0@976|Bacteroidetes,1HXHU@117743|Flavobacteriia,2NYDJ@237|Flavobacterium	976|Bacteroidetes	M	Glycosyl transferase family 21	-	-	-	-	-	-	-	-	-	-	-	-	Glyco_tranf_2_3,Glycos_transf_2
BYD3_k127_1123666_5	1168034.FH5T_01205	6.169e-106	356.0	COG0438@1|root,COG0438@2|Bacteria,4NFD3@976|Bacteroidetes,2FQT6@200643|Bacteroidia	976|Bacteroidetes	M	Glycosyl transferases group 1	-	-	-	-	-	-	-	-	-	-	-	-	Glyco_trans_1_4,Glyco_transf_4
BYD3_k127_1123666_7	1235803.C825_02642	1.391e-39	159.0	COG0795@1|root,COG0795@2|Bacteria,4NE8B@976|Bacteroidetes,2FP6P@200643|Bacteroidia,22XC3@171551|Porphyromonadaceae	976|Bacteroidetes	S	Permease, YjgP YjgQ family	-	-	-	ko:K07091	ko02010,map02010	M00320	-	-	ko00000,ko00001,ko00002,ko02000	1.B.42.1	-	-	YjgP_YjgQ
BYD3_k127_1137538_0	742817.HMPREF9449_01589	3.498e-203	661.0	COG1452@1|root,COG1452@2|Bacteria,4NFWD@976|Bacteroidetes,2FM9F@200643|Bacteroidia,22W8Y@171551|Porphyromonadaceae	976|Bacteroidetes	M	Psort location OuterMembrane, score	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_1137538_2	1121481.AUAS01000001_gene4548	1.406e-38	151.0	COG1595@1|root,COG1595@2|Bacteria,4NNBY@976|Bacteroidetes,47PH5@768503|Cytophagia	976|Bacteroidetes	K	RNA polymerase sigma factor, sigma-70 family	-	-	-	ko:K03088	-	-	-	-	ko00000,ko03021	-	-	-	Sigma70_r2,Sigma70_r4_2
BYD3_k127_1137538_1	484018.BACPLE_00605	4.707e-40	162.0	COG3712@1|root,COG3712@2|Bacteria,4NKN5@976|Bacteroidetes,2FQIS@200643|Bacteroidia,4ANPA@815|Bacteroidaceae	976|Bacteroidetes	PT	Sigma factor regulatory protein, FecR PupR family	-	-	-	-	-	-	-	-	-	-	-	-	DUF4974,FecR
BYD3_k127_1175964_3	1123008.KB905694_gene1558	9.739e-43	157.0	2CHCP@1|root,32S5R@2|Bacteria,4NS9G@976|Bacteroidetes	976|Bacteroidetes	S	Domain of unknown function (DU1801)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1801
BYD3_k127_1175964_5	1168289.AJKI01000007_gene182	1.171e-26	113.0	COG2149@1|root,COG2149@2|Bacteria,4NSIV@976|Bacteroidetes,2FZ1Y@200643|Bacteroidia,3XKW6@558415|Marinilabiliaceae	976|Bacteroidetes	S	Domain of unknown function (DUF202)	-	-	-	ko:K00389	-	-	-	-	ko00000	-	-	-	DUF202
BYD3_k127_1175964_1	1123008.KB905694_gene1719	3.607e-99	332.0	COG0500@1|root,COG2226@2|Bacteria,4NEUC@976|Bacteroidetes,2FPEJ@200643|Bacteroidia,22YY7@171551|Porphyromonadaceae	976|Bacteroidetes	Q	Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT)	arsM	-	2.1.1.137,2.1.1.79	ko:K00574,ko:K07755	-	-	-	-	ko00000,ko01000	-	-	-	Methyltransf_11,Methyltransf_31
BYD3_k127_1175964_0	1122931.AUAE01000031_gene2866	6.419e-255	801.0	COG1653@1|root,COG1653@2|Bacteria,4NG6U@976|Bacteroidetes,2FRMG@200643|Bacteroidia,2310A@171551|Porphyromonadaceae	976|Bacteroidetes	G	Periplasmic copper-binding protein (NosD)	-	-	3.2.1.55	ko:K01209	ko00520,map00520	-	R01762	-	ko00000,ko00001,ko01000	-	GH51	-	Beta_helix,DUF1565
BYD3_k127_1175964_4	1341181.FLJC2902T_27410	1.055e-35	140.0	COG2350@1|root,COG2350@2|Bacteria,4NQAG@976|Bacteroidetes,1II5T@117743|Flavobacteriia,2NVXN@237|Flavobacterium	976|Bacteroidetes	S	YCII-related domain	-	-	-	-	-	-	-	-	-	-	-	-	YCII
BYD3_k127_1175964_2	1341181.FLJC2902T_22310	1.12e-60	214.0	COG0262@1|root,COG0262@2|Bacteria,4NQK0@976|Bacteroidetes,1I00Y@117743|Flavobacteriia,2NUNF@237|Flavobacterium	976|Bacteroidetes	H	Dihydrofolate reductase	-	-	1.5.1.3	ko:K00287	ko00670,ko00790,ko01100,ko01523,map00670,map00790,map01100,map01523	M00126,M00840	R00936,R00937,R00939,R00940,R02235,R02236,R11765	RC00109,RC00110,RC00158	ko00000,ko00001,ko00002,ko01000	-	-	-	RibD_C
BYD3_k127_1176183_3	1168289.AJKI01000011_gene376	3.666e-11	63.0	COG0275@1|root,COG0275@2|Bacteria,4NFQB@976|Bacteroidetes,2FMPT@200643|Bacteroidia,3XJGJ@558415|Marinilabiliaceae	976|Bacteroidetes	M	MraW methylase family	rsmH	GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016434,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0070475,GO:0071424,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360	2.1.1.199	ko:K03438	-	-	-	-	ko00000,ko01000,ko03009	-	-	-	Methyltransf_5
BYD3_k127_1176183_2	1121129.KB903359_gene2076	1.228e-13	76.0	2ACZI@1|root,312MC@2|Bacteria,4PHKN@976|Bacteroidetes,2G1IY@200643|Bacteroidia,22Z1T@171551|Porphyromonadaceae	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_1176183_0	1168289.AJKI01000011_gene374	1.319e-210	675.0	COG0768@1|root,COG0768@2|Bacteria,4NERV@976|Bacteroidetes,2FM0U@200643|Bacteroidia,3XIWA@558415|Marinilabiliaceae	976|Bacteroidetes	M	Penicillin-binding Protein dimerisation domain	ftsI	-	3.4.16.4	ko:K03587	ko00550,ko01501,map00550,map01501	-	-	-	ko00000,ko00001,ko01000,ko01011,ko03036	-	-	-	PASTA,PBP_dimer,Transpeptidase
BYD3_k127_1176183_1	742725.HMPREF9450_00331	2.133e-154	496.0	COG0769@1|root,COG0769@2|Bacteria,4NE9W@976|Bacteroidetes,2FM8E@200643|Bacteroidia,22UB2@171550|Rikenellaceae	976|Bacteroidetes	M	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan	murE	-	6.3.2.13	ko:K01928	ko00300,ko00550,map00300,map00550	-	R02788	RC00064,RC00090	ko00000,ko00001,ko01000,ko01011	-	-	-	Mur_ligase,Mur_ligase_C,Mur_ligase_M
BYD3_k127_1204163_0	1121012.AUKX01000033_gene605	1.136e-272	875.0	COG1629@1|root,COG4771@2|Bacteria,4P1Z5@976|Bacteroidetes,1IJ87@117743|Flavobacteriia,23HSU@178469|Arenibacter	976|Bacteroidetes	P	TonB dependent receptor	-	-	-	-	-	-	-	-	-	-	-	-	CarbopepD_reg_2,Plug,TonB_dep_Rec
BYD3_k127_1204163_1	1048983.EL17_08035	1.076e-46	175.0	COG3712@1|root,COG3712@2|Bacteria,4NJBJ@976|Bacteroidetes,47RQM@768503|Cytophagia	976|Bacteroidetes	PT	Domain of unknown function (DUF4974)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4974,FecR
BYD3_k127_1236372_0	1150600.ADIARSV_0897	1.105e-179	583.0	COG0651@1|root,COG0651@2|Bacteria	2|Bacteria	CP	ATP synthesis coupled electron transport	hyfB	GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944	-	ko:K12137,ko:K15828	-	-	-	-	ko00000,ko01000	-	-	iB21_1397.B21_02538,iECBD_1354.ECBD_1002,iECB_1328.ECB_02573,iECD_1391.ECD_02573,iECED1_1282.ECED1_3174,iECO111_1330.ECO111_3443,iECO26_1355.ECO26_3788,iECP_1309.ECP_2686,iEKO11_1354.EKO11_1252,iEcHS_1320.EcHS_A2859,iLF82_1304.LF82_1065,iNRG857_1313.NRG857_13330	Proton_antipo_M,Proton_antipo_N
BYD3_k127_1236372_1	1150600.ADIARSV_0897	3.536e-130	439.0	COG0651@1|root,COG0651@2|Bacteria	2|Bacteria	CP	ATP synthesis coupled electron transport	hyfB	GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944	-	ko:K12137,ko:K15828	-	-	-	-	ko00000,ko01000	-	-	iB21_1397.B21_02538,iECBD_1354.ECBD_1002,iECB_1328.ECB_02573,iECD_1391.ECD_02573,iECED1_1282.ECED1_3174,iECO111_1330.ECO111_3443,iECO26_1355.ECO26_3788,iECP_1309.ECP_2686,iEKO11_1354.EKO11_1252,iEcHS_1320.EcHS_A2859,iLF82_1304.LF82_1065,iNRG857_1313.NRG857_13330	Proton_antipo_M,Proton_antipo_N
BYD3_k127_1236372_2	1150600.ADIARSV_0898	1.226e-129	420.0	COG0650@1|root,COG0650@2|Bacteria,4P2YM@976|Bacteroidetes	976|Bacteroidetes	C	NADH dehydrogenase	-	-	-	-	-	-	-	-	-	-	-	-	NADHdh
BYD3_k127_1236372_3	1150600.ADIARSV_0899	9.787e-46	172.0	COG4237@1|root,COG4237@2|Bacteria,4P642@976|Bacteroidetes	976|Bacteroidetes	C	Hydrogenase 4 membrane	-	-	-	ko:K12140	-	-	-	-	ko00000,ko01000	-	-	-	-
BYD3_k127_1294514_1	382464.ABSI01000010_gene3809	3.462e-97	324.0	COG1073@1|root,COG1073@2|Bacteria	2|Bacteria	S	thiolester hydrolase activity	-	-	-	ko:K06889	-	-	-	-	ko00000	-	-	-	BAAT_C,Bile_Hydr_Trans
BYD3_k127_1294514_0	1122176.KB903619_gene5461	2.031e-250	791.0	COG1505@1|root,COG1505@2|Bacteria,4NFJS@976|Bacteroidetes,1IPCR@117747|Sphingobacteriia	976|Bacteroidetes	E	Prolyl oligopeptidase, N-terminal beta-propeller domain	-	-	3.4.21.26	ko:K01322	ko04614,map04614	-	-	-	ko00000,ko00001,ko01000,ko01002	-	-	-	Peptidase_S9,Peptidase_S9_N
BYD3_k127_1294514_2	1392488.JHZY01000002_gene557	4.749e-56	196.0	COG2076@1|root,COG2076@2|Bacteria,4NQ4U@976|Bacteroidetes,1I2X4@117743|Flavobacteriia,2XK9U@283735|Leeuwenhoekiella	976|Bacteroidetes	P	Small Multidrug Resistance protein	-	-	-	ko:K11741	-	-	-	-	ko00000,ko02000	2.A.7.1	-	-	Multi_Drug_Res
BYD3_k127_1294514_3	1131462.DCF50_p947	2.83e-32	131.0	COG0346@1|root,COG0346@2|Bacteria,1V204@1239|Firmicutes,25B5P@186801|Clostridia,262H2@186807|Peptococcaceae	186801|Clostridia	E	Glyoxalase-like domain	-	-	-	-	-	-	-	-	-	-	-	-	Glyoxalase_2
BYD3_k127_1305918_0	869213.JCM21142_104181	1.905e-153	501.0	COG0741@1|root,COG1388@1|root,COG0741@2|Bacteria,COG1388@2|Bacteria,4NEKW@976|Bacteroidetes,47KJK@768503|Cytophagia	976|Bacteroidetes	M	PFAM Transglycosylase SLT domain	mltD	-	-	ko:K08307	-	-	-	-	ko00000,ko01000,ko01011	-	-	-	LysM,SLT
BYD3_k127_1305918_1	1168034.FH5T_15130	9.262e-107	363.0	COG2755@1|root,COG2755@2|Bacteria,4NHT6@976|Bacteroidetes,2G37X@200643|Bacteroidia	976|Bacteroidetes	E	lipolytic protein G-D-S-L family	-	-	-	-	-	-	-	-	-	-	-	-	Lipase_GDSL,Lipase_GDSL_2
BYD3_k127_1305918_2	1121007.AUML01000015_gene3961	2.709e-89	312.0	COG2755@1|root,COG2755@2|Bacteria,4NGW6@976|Bacteroidetes,1I0ZE@117743|Flavobacteriia,2YGKA@290174|Aquimarina	976|Bacteroidetes	E	GDSL-like Lipase/Acylhydrolase family	-	-	-	-	-	-	-	-	-	-	-	-	Lipase_GDSL,Lipase_GDSL_2,LysM
BYD3_k127_1334053_2	1168034.FH5T_16605	6.467e-58	205.0	COG1148@1|root,COG2878@1|root,COG1148@2|Bacteria,COG2878@2|Bacteria,4NFEB@976|Bacteroidetes,2FMPN@200643|Bacteroidia	976|Bacteroidetes	C	electron transport complex, RnfABCDGE type, B subunit	rnfB	-	-	ko:K03616	-	-	-	-	ko00000	-	-	-	FeS,Fer4
BYD3_k127_1334053_4	1211813.CAPH01000006_gene1518	2.107e-15	81.0	COG3086@1|root,COG3086@2|Bacteria	2|Bacteria	T	response to oxidative stress	rseC	GO:0005575,GO:0005623,GO:0005886,GO:0006950,GO:0006979,GO:0008150,GO:0016020,GO:0044464,GO:0050896,GO:0071944	-	ko:K03803	-	-	-	-	ko00000,ko03021	-	-	-	RseC_MucC
BYD3_k127_1334053_0	1168289.AJKI01000007_gene186	3.32e-264	835.0	COG1674@1|root,COG1674@2|Bacteria,4NE86@976|Bacteroidetes,2FMX0@200643|Bacteroidia,3XJC7@558415|Marinilabiliaceae	976|Bacteroidetes	D	Ftsk_gamma	ftsK	-	-	ko:K03466	-	-	-	-	ko00000,ko03036	3.A.12	-	-	FtsK_4TM,FtsK_SpoIIIE,Ftsk_gamma
BYD3_k127_1334053_3	886379.AEWI01000013_gene2121	5.469e-42	162.0	COG2834@1|root,COG2834@2|Bacteria,4NFGN@976|Bacteroidetes,2FQ63@200643|Bacteroidia,3XJRT@558415|Marinilabiliaceae	976|Bacteroidetes	M	Outer membrane lipoprotein carrier protein LolA	lolA	-	-	ko:K03634	-	-	-	-	ko00000	-	-	-	LolA,LolA_2
BYD3_k127_1334053_1	869213.JCM21142_122	6.207e-192	610.0	COG2195@1|root,COG2195@2|Bacteria,4NG8I@976|Bacteroidetes	976|Bacteroidetes	E	Xaa-His dipeptidase	pepD_2	-	-	ko:K01270	ko00480,ko01100,map00480,map01100	-	R00899,R04951	RC00096,RC00141	ko00000,ko00001,ko01000,ko01002	-	-	-	M20_dimer,Peptidase_M20
BYD3_k127_1381585_3	1121129.KB903360_gene3567	8.267e-35	144.0	COG1538@1|root,COG1538@2|Bacteria,4NF4X@976|Bacteroidetes,2FN2J@200643|Bacteroidia,22WEM@171551|Porphyromonadaceae	976|Bacteroidetes	MU	outer membrane efflux protein	-	-	-	-	-	-	-	-	-	-	-	-	OEP
BYD3_k127_1381585_2	929556.Solca_1726	1.554e-91	314.0	COG0845@1|root,COG0845@2|Bacteria,4NERP@976|Bacteroidetes,1IP8S@117747|Sphingobacteriia	976|Bacteroidetes	M	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family	-	-	-	-	-	-	-	-	-	-	-	-	HlyD_D23
BYD3_k127_1381585_0	926549.KI421517_gene2177	0.0	1199.0	COG0841@1|root,COG0841@2|Bacteria,4NDZG@976|Bacteroidetes,47ME1@768503|Cytophagia	976|Bacteroidetes	V	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family	-	-	-	-	-	-	-	-	-	-	-	-	ACR_tran
BYD3_k127_1381585_1	1168034.FH5T_04105	2.946e-95	320.0	COG0697@1|root,COG0697@2|Bacteria,4NIBF@976|Bacteroidetes,2FR06@200643|Bacteroidia	976|Bacteroidetes	EG	EamA-like transporter family	-	-	-	-	-	-	-	-	-	-	-	-	EamA
BYD3_k127_1403161_1	1168034.FH5T_05590	0.0	1074.0	COG0013@1|root,COG0013@2|Bacteria,4NFHW@976|Bacteroidetes,2FN1R@200643|Bacteroidia	976|Bacteroidetes	J	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain	alaS	GO:0003674,GO:0003824,GO:0004812,GO:0004813,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006412,GO:0006418,GO:0006419,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016597,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0031406,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0036094,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043177,GO:0043412,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576	6.1.1.7	ko:K01872	ko00970,map00970	M00359,M00360	R03038	RC00055,RC00523	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	-	-	-	DHHA1,tRNA-synt_2c,tRNA_SAD
BYD3_k127_1403161_21	700598.Niako_7024	4.596e-42	164.0	COG2834@1|root,COG2834@2|Bacteria,4NHV3@976|Bacteroidetes,1IZ7F@117747|Sphingobacteriia	976|Bacteroidetes	M	Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane)	-	-	-	-	-	-	-	-	-	-	-	-	LolA_like
BYD3_k127_1403161_5	742725.HMPREF9450_01251	3.941e-199	629.0	COG1063@1|root,COG1063@2|Bacteria,4NKPX@976|Bacteroidetes,2FRTY@200643|Bacteroidia	976|Bacteroidetes	E	Alcohol dehydrogenase GroES-like domain	-	-	-	ko:K19956	ko00051,map00051	-	R03234	RC00089	ko00000,ko00001,ko01000	-	-	-	ADH_N,ADH_zinc_N
BYD3_k127_1403161_3	1211813.CAPH01000003_gene1376	2.068e-223	710.0	COG1028@1|root,COG3347@1|root,COG1028@2|Bacteria,COG3347@2|Bacteria,4NEM0@976|Bacteroidetes,2FWDE@200643|Bacteroidia	976|Bacteroidetes	IQ	Class II Aldolase and Adducin N-terminal domain	-	-	-	-	-	-	-	-	-	-	-	-	Aldolase_II,adh_short,adh_short_C2
BYD3_k127_1403161_12	1168034.FH5T_00995	1.662e-117	390.0	COG0613@1|root,COG0613@2|Bacteria,4NGUQ@976|Bacteroidetes,2FR3M@200643|Bacteroidia	976|Bacteroidetes	S	PHP domain protein	-	-	-	-	-	-	-	-	-	-	-	-	PHP
BYD3_k127_1403161_0	1168034.FH5T_01000	0.0	1265.0	COG0022@1|root,COG1071@1|root,COG0022@2|Bacteria,COG1071@2|Bacteria,4NE4N@976|Bacteroidetes,2FQUA@200643|Bacteroidia	976|Bacteroidetes	C	Dehydrogenase E1 component	-	-	1.2.4.4	ko:K11381	ko00280,ko00640,ko01100,ko01110,ko01130,map00280,map00640,map01100,map01110,map01130	M00036	R07599,R07600,R07601,R07602,R07603,R07604,R10996,R10997	RC00027,RC00627,RC02743,RC02883,RC02949,RC02953	br01601,ko00000,ko00001,ko00002,ko01000	-	-	-	E1_dh,Transket_pyr,Transketolase_C
BYD3_k127_1403161_9	1123008.KB905706_gene854	7.828e-133	434.0	COG0508@1|root,COG0508@2|Bacteria,4NFB9@976|Bacteroidetes,2G2WC@200643|Bacteroidia	976|Bacteroidetes	C	Psort location Cytoplasmic, score	pdhC	-	2.3.1.12	ko:K00627	ko00010,ko00020,ko00620,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00020,map00620,map01100,map01110,map01120,map01130,map01200	M00307	R00209,R02569	RC00004,RC02742,RC02857	br01601,ko00000,ko00001,ko00002,ko01000	-	-	-	2-oxoacid_dh,Biotin_lipoyl,E3_binding
BYD3_k127_1403161_16	385682.AFSL01000072_gene1343	1.01e-87	298.0	COG2188@1|root,COG2188@2|Bacteria,4NFVY@976|Bacteroidetes,2FXB6@200643|Bacteroidia	976|Bacteroidetes	K	UTRA	-	-	-	ko:K03710,ko:K10711	-	-	-	-	ko00000,ko03000	-	-	-	GntR,UTRA
BYD3_k127_1403161_8	1408433.JHXV01000021_gene1662	8.604e-142	465.0	COG1109@1|root,COG1109@2|Bacteria,4NG3H@976|Bacteroidetes,1HWVH@117743|Flavobacteriia,2PBCM@246874|Cryomorphaceae	976|Bacteroidetes	G	PFAM Phosphoglucomutase phosphomannomutase, alpha beta alpha domain II	-	-	5.4.2.2	ko:K01835	ko00010,ko00030,ko00052,ko00230,ko00500,ko00520,ko00521,ko01100,ko01110,ko01120,ko01130,map00010,map00030,map00052,map00230,map00500,map00520,map00521,map01100,map01110,map01120,map01130	M00549	R00959,R01057,R08639	RC00408	ko00000,ko00001,ko00002,ko01000	-	-	-	PGM_PMM_I,PGM_PMM_II,PGM_PMM_III,PGM_PMM_IV
BYD3_k127_1403161_14	1168289.AJKI01000022_gene1896	1.195e-103	348.0	COG1559@1|root,COG1559@2|Bacteria,4NG17@976|Bacteroidetes,2FMVX@200643|Bacteroidia,3XJQ3@558415|Marinilabiliaceae	976|Bacteroidetes	S	YceG-like family	mltG	-	-	ko:K07082	-	-	-	-	ko00000	-	-	-	YceG
BYD3_k127_1403161_6	869213.JCM21142_83121	1.101e-152	496.0	COG1030@1|root,COG1030@2|Bacteria,4NGGV@976|Bacteroidetes,47MQR@768503|Cytophagia	976|Bacteroidetes	O	Membrane-bound serine protease (ClpP class)	-	-	-	ko:K07403	-	-	-	-	ko00000	-	-	-	NfeD,Peptidase_S49,SDH_sah
BYD3_k127_1403161_4	1408473.JHXO01000011_gene3071	2.321e-204	644.0	COG0015@1|root,COG0015@2|Bacteria,4NFY8@976|Bacteroidetes,2FMYF@200643|Bacteroidia	976|Bacteroidetes	F	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily	purB	-	4.3.2.2	ko:K01756	ko00230,ko00250,ko01100,ko01110,ko01130,map00230,map00250,map01100,map01110,map01130	M00048,M00049	R01083,R04559	RC00379,RC00444,RC00445	ko00000,ko00001,ko00002,ko01000	-	-	-	ADSL_C,ASL_C,Lyase_1
BYD3_k127_1403161_22	1173021.ALWA01000016_gene2097	2.835e-33	146.0	28J0X@1|root,2Z8Y1@2|Bacteria,1G74Y@1117|Cyanobacteria	1117|Cyanobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_1403161_13	391615.ABSJ01000004_gene638	1.115e-112	372.0	COG1215@1|root,COG1215@2|Bacteria,1R8C3@1224|Proteobacteria,1RYY8@1236|Gammaproteobacteria	1236|Gammaproteobacteria	M	transferase activity, transferring glycosyl groups	-	-	-	-	-	-	-	-	-	-	-	-	Glyco_tranf_2_4
BYD3_k127_1403161_2	1408473.JHXO01000011_gene3072	3.841e-234	739.0	COG1132@1|root,COG1132@2|Bacteria,4NE2D@976|Bacteroidetes,2FMUK@200643|Bacteroidia	976|Bacteroidetes	V	ABC transporter, ATP-binding protein	msbA	-	-	ko:K06147,ko:K11085	ko02010,map02010	-	-	-	ko00000,ko00001,ko01000,ko02000	3.A.1.106,3.A.1.109,3.A.1.21	-	-	ABC_membrane,ABC_tran
BYD3_k127_1403161_11	1121481.AUAS01000011_gene5009	7.327e-119	404.0	COG1368@1|root,COG1368@2|Bacteria,4NFI9@976|Bacteroidetes,47K4G@768503|Cytophagia	976|Bacteroidetes	M	COGs COG1368 Phosphoglycerol transferase and related protein alkaline phosphatase superfamily	ltaS2	-	-	-	-	-	-	-	-	-	-	-	Sulfatase
BYD3_k127_1403161_15	1237149.C900_05645	5.608e-93	315.0	COG0530@1|root,COG0530@2|Bacteria,4NFBC@976|Bacteroidetes,47UAQ@768503|Cytophagia	976|Bacteroidetes	P	Sodium/calcium exchanger protein	yrbG	-	-	ko:K07301	-	-	-	-	ko00000,ko02000	2.A.19.5	-	-	Na_Ca_ex
BYD3_k127_1403161_19	1168034.FH5T_09880	1.174e-69	240.0	COG1057@1|root,COG1057@2|Bacteria,4NFQI@976|Bacteroidetes,2FTAA@200643|Bacteroidia	976|Bacteroidetes	H	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)	nadD	GO:0000309,GO:0003674,GO:0003824,GO:0004515,GO:0006082,GO:0006139,GO:0006520,GO:0006531,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009066,GO:0009108,GO:0009117,GO:0009165,GO:0009435,GO:0009987,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019355,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019637,GO:0019674,GO:0019752,GO:0034627,GO:0034628,GO:0034641,GO:0034654,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046483,GO:0046496,GO:0051186,GO:0051188,GO:0055086,GO:0070566,GO:0071704,GO:0072524,GO:0072525,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605	2.7.7.18	ko:K00969	ko00760,ko01100,map00760,map01100	M00115	R00137,R03005	RC00002	ko00000,ko00001,ko00002,ko01000	-	-	-	CTP_transf_like
BYD3_k127_1403161_20	1380600.AUYN01000006_gene788	4.039e-65	227.0	COG0194@1|root,COG0194@2|Bacteria,4NEDG@976|Bacteroidetes,1HXN2@117743|Flavobacteriia	976|Bacteroidetes	F	Essential for recycling GMP and indirectly, cGMP	gmk	GO:0003674,GO:0003824,GO:0004385,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009126,GO:0009132,GO:0009135,GO:0009150,GO:0009161,GO:0009165,GO:0009167,GO:0009179,GO:0009185,GO:0009259,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0042278,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046037,GO:0046128,GO:0046483,GO:0046710,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0072521,GO:0090407,GO:1901068,GO:1901135,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901576,GO:1901657	2.7.4.8	ko:K00942	ko00230,ko01100,map00230,map01100	M00050	R00332,R02090	RC00002	ko00000,ko00001,ko00002,ko01000	-	-	-	Guanylate_kin
BYD3_k127_1403161_17	869213.JCM21142_83269	2.153e-84	288.0	COG1561@1|root,COG1561@2|Bacteria,4NEU4@976|Bacteroidetes,47JXA@768503|Cytophagia	976|Bacteroidetes	S	PFAM YicC-like family, N-terminal region	-	-	-	-	-	-	-	-	-	-	-	-	DUF1732,YicC_N
BYD3_k127_1403161_18	886379.AEWI01000033_gene2741	2.586e-81	274.0	COG0179@1|root,COG0179@2|Bacteria,4NGCT@976|Bacteroidetes,2FPPX@200643|Bacteroidia,3XIWC@558415|Marinilabiliaceae	976|Bacteroidetes	Q	Fumarylacetoacetate (FAA) hydrolase family	fahA	-	-	-	-	-	-	-	-	-	-	-	FAA_hydrolase
BYD3_k127_1403161_10	435591.BDI_0695	8.017e-121	392.0	COG0847@1|root,COG0847@2|Bacteria,4NE82@976|Bacteroidetes,2FMQF@200643|Bacteroidia,22WYR@171551|Porphyromonadaceae	976|Bacteroidetes	L	DNA polymerase III subunit epsilon	dnaQ	-	2.7.7.7	ko:K02342	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	M00260	R00375,R00376,R00377,R00378	RC02795	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	-	-	-	RNase_T
BYD3_k127_1403161_7	1168034.FH5T_03005	1.24e-151	487.0	COG0592@1|root,COG0592@2|Bacteria,4NESB@976|Bacteroidetes,2FMPF@200643|Bacteroidia	976|Bacteroidetes	L	Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria	dnaN	-	2.7.7.7	ko:K02338	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	M00260	R00375,R00376,R00377,R00378	RC02795	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	-	-	-	DNA_pol3_beta,DNA_pol3_beta_2,DNA_pol3_beta_3
BYD3_k127_1424949_4	1499967.BAYZ01000190_gene3841	7.789e-63	224.0	COG1349@1|root,COG1349@2|Bacteria,2NPT7@2323|unclassified Bacteria	2|Bacteria	K	DeoR C terminal sensor domain	yciT	GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006351,GO:0006355,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009889,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0016070,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0031323,GO:0031326,GO:0032774,GO:0033554,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051252,GO:0051716,GO:0060255,GO:0065007,GO:0071704,GO:0080090,GO:0090304,GO:0097659,GO:1901360,GO:1901362,GO:1901576,GO:1903506,GO:2000112,GO:2001141	-	-	-	-	-	-	-	-	-	-	DeoRC,HTH_DeoR
BYD3_k127_1424949_2	1499967.BAYZ01000190_gene3840	1.69e-101	340.0	COG1940@1|root,COG1940@2|Bacteria	2|Bacteria	GK	ROK family	glkA	-	2.7.1.2	ko:K00845	ko00010,ko00052,ko00500,ko00520,ko00521,ko00524,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00052,map00500,map00520,map00521,map00524,map01100,map01110,map01120,map01130,map01200	M00001,M00549	R00299,R01600,R01786	RC00002,RC00017	ko00000,ko00001,ko00002,ko01000	-	-	-	ROK
BYD3_k127_1424949_0	1499967.BAYZ01000190_gene3814	0.0	1140.0	COG1882@1|root,COG1882@2|Bacteria	2|Bacteria	C	formate C-acetyltransferase activity	ybiW	GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464	2.3.1.54	ko:K00656	ko00620,ko00640,ko00650,ko01100,ko01120,map00620,map00640,map00650,map01100,map01120	-	R00212,R06987	RC00004,RC01181,RC02742,RC02833	ko00000,ko00001,ko01000	-	-	-	Gly_radical,PFL-like
BYD3_k127_1424949_3	1499967.BAYZ01000190_gene3813	2.405e-80	277.0	COG1180@1|root,COG1180@2|Bacteria	2|Bacteria	C	glycyl-radical enzyme activating activity	ybiY	-	1.97.1.4	ko:K04069	-	-	R04710	-	ko00000,ko01000	-	-	-	Fer4_12,Radical_SAM
BYD3_k127_1424949_5	565033.GACE_0672	2.549e-28	119.0	COG2703@1|root,arCOG06577@2157|Archaea,2XX8P@28890|Euryarchaeota	28890|Euryarchaeota	P	Hemerythrin HHE cation binding domain	-	-	-	ko:K07216	-	-	-	-	ko00000	-	-	-	AMP-binding,Hemerythrin
BYD3_k127_1424949_1	1227739.Hsw_1827	2.336e-172	553.0	COG5520@1|root,COG5520@2|Bacteria,4NF4C@976|Bacteroidetes,47UI1@768503|Cytophagia	976|Bacteroidetes	G	Glycosyl hydrolase family 30 beta sandwich domain	-	-	3.2.1.45	ko:K01201	ko00511,ko00600,ko01100,ko04142,map00511,map00600,map01100,map04142	-	R01498	RC00059,RC00451	ko00000,ko00001,ko01000	-	GH30	-	Glyco_hydro_30,Glyco_hydro_30C
BYD3_k127_1425804_0	1121904.ARBP01000006_gene3720	1.468e-194	617.0	COG0076@1|root,COG0076@2|Bacteria,4NFUP@976|Bacteroidetes,47MZ0@768503|Cytophagia	976|Bacteroidetes	E	Pyridoxal-dependent decarboxylase conserved domain	-	-	4.1.1.105,4.1.1.28	ko:K01593	ko00350,ko00360,ko00380,ko00901,ko00950,ko00965,ko01100,ko01110,ko04726,ko04728,ko05030,ko05031,ko05034,map00350,map00360,map00380,map00901,map00950,map00965,map01100,map01110,map04726,map04728,map05030,map05031,map05034	M00037,M00042	R00685,R00699,R00736,R02080,R02701,R04909	RC00299	ko00000,ko00001,ko00002,ko01000,ko04147	-	-	-	Pyridoxal_deC
BYD3_k127_1425804_1	880073.Calab_1713	5.051e-139	456.0	COG1660@1|root,COG3178@1|root,COG1660@2|Bacteria,COG3178@2|Bacteria,2NP9G@2323|unclassified Bacteria	2|Bacteria	S	P-loop ATPase protein family	-	GO:0000166,GO:0000270,GO:0003674,GO:0003824,GO:0005488,GO:0005524,GO:0005975,GO:0006022,GO:0006040,GO:0006082,GO:0006793,GO:0006796,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009254,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0017076,GO:0019200,GO:0019752,GO:0030203,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0043436,GO:0044237,GO:0044238,GO:0044262,GO:0044281,GO:0046835,GO:0071704,GO:0097159,GO:0097172,GO:0097367,GO:1901135,GO:1901265,GO:1901363,GO:1901564	2.7.1.221	ko:K06958,ko:K07102	ko00520,ko01100,map00520,map01100	-	R08968,R11024	RC00002,RC00078	ko00000,ko00001,ko01000,ko03019	-	-	-	APH,ATP_bind_2
BYD3_k127_1425804_2	517418.Ctha_0879	1.47e-32	128.0	COG1208@1|root,COG1208@2|Bacteria,1FDKD@1090|Chlorobi	1090|Chlorobi	M	PFAM Nucleotidyl transferase	-	-	2.7.7.13	ko:K00966	ko00051,ko00520,ko01100,ko01110,map00051,map00520,map01100,map01110	M00114,M00361,M00362	R00885	RC00002	ko00000,ko00001,ko00002,ko01000	-	-	-	NTP_transferase
BYD3_k127_1447126_3	1123248.KB893332_gene2259	4.246e-33	131.0	COG4206@1|root,COG4206@2|Bacteria,4P258@976|Bacteroidetes	976|Bacteroidetes	H	TonB-linked outer membrane protein, SusC RagA family	-	-	-	-	-	-	-	-	-	-	-	-	CarbopepD_reg_2,Plug,TonB_dep_Rec
BYD3_k127_1447126_0	118173.KB235914_gene3423	1.661e-88	306.0	COG2159@1|root,COG2159@2|Bacteria	2|Bacteria	E	amidohydrolase	-	-	-	-	-	-	-	-	-	-	-	-	Amidohydro_2
BYD3_k127_1447126_2	1519464.HY22_07390	1.374e-44	164.0	COG0346@1|root,COG0346@2|Bacteria	2|Bacteria	E	lactoylglutathione lyase activity	ble	-	-	-	-	-	-	-	-	-	-	-	Glyoxalase,Glyoxalase_2
BYD3_k127_1447126_1	1380600.AUYN01000009_gene1077	5.047e-66	241.0	COG2133@1|root,COG2133@2|Bacteria,4NF61@976|Bacteroidetes	976|Bacteroidetes	G	Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella	-	-	-	-	-	-	-	-	-	-	-	-	VCBS
BYD3_k127_1447126_4	251229.Chro_4812	8.566e-10	63.0	COG2372@1|root,COG2372@2|Bacteria	2|Bacteria	C	response to copper ion	-	-	-	-	-	-	-	-	-	-	-	-	Big_5,DUF4082,SASA,SLH
BYD3_k127_146458_0	1123057.P872_16125	2.832e-263	847.0	COG4888@1|root,COG4888@2|Bacteria,4NEE8@976|Bacteroidetes,47JJ5@768503|Cytophagia	976|Bacteroidetes	S	ASPIC and UnbV	-	-	-	-	-	-	-	-	-	-	-	-	UnbV_ASPIC,VCBS
BYD3_k127_146458_1	1048983.EL17_06385	3.517e-75	260.0	COG1395@1|root,COG1395@2|Bacteria,4PMSD@976|Bacteroidetes,47Y95@768503|Cytophagia	976|Bacteroidetes	K	SusD family	-	-	-	ko:K21572	-	-	-	-	ko00000,ko02000	8.A.46.1,8.A.46.3	-	-	SusD-like_3,SusD_RagB
BYD3_k127_1494884_1	1313421.JHBV01000029_gene1950	1.531e-13	85.0	COG1404@1|root,COG3291@1|root,COG1404@2|Bacteria,COG3291@2|Bacteria	2|Bacteria	S	metallopeptidase activity	-	-	-	-	-	-	-	-	-	-	-	-	CHU_C,PKD,SprB
BYD3_k127_1494884_2	319236.JCM19294_702	1.358e-06	62.0	COG3291@1|root,COG3291@2|Bacteria,4NDZQ@976|Bacteroidetes,1HX5A@117743|Flavobacteriia,3HKWA@363408|Nonlabens	976|Bacteroidetes	S	C-terminal domain of CHU protein family	-	-	-	-	-	-	-	-	-	-	-	-	CHU_C,HYR,PKD,SprB
BYD3_k127_1494884_0	1408473.JHXO01000010_gene3611	9.852e-171	589.0	COG3291@1|root,COG3291@2|Bacteria,4PHVT@976|Bacteroidetes,2FUHU@200643|Bacteroidia	976|Bacteroidetes	S	Repeats in polycystic kidney disease 1 (PKD1) and other proteins	-	-	-	-	-	-	-	-	-	-	-	-	CHU_C,PKD
BYD3_k127_1505802_8	709991.Odosp_3527	1.76e-19	95.0	COG0545@1|root,COG0545@2|Bacteria,4NJKK@976|Bacteroidetes,2G31X@200643|Bacteroidia,2304T@171551|Porphyromonadaceae	976|Bacteroidetes	M	Domain amino terminal to FKBP-type peptidyl-prolyl isomerase	fkpB	-	5.2.1.8	ko:K03772,ko:K03773	-	-	-	-	ko00000,ko01000,ko03110	-	-	-	FKBP_C,FKBP_N
BYD3_k127_1505802_5	755732.Fluta_3173	2.23e-42	177.0	COG0419@1|root,COG1196@1|root,COG3391@1|root,COG0419@2|Bacteria,COG1196@2|Bacteria,COG3391@2|Bacteria,4PP0U@976|Bacteroidetes,1ICPT@117743|Flavobacteriia,2PBJT@246874|Cryomorphaceae	976|Bacteroidetes	DL	nuclear chromosome segregation	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_1505802_7	1168034.FH5T_13780	3.249e-27	113.0	COG2127@1|root,COG2127@2|Bacteria,4NS8R@976|Bacteroidetes,2FZYN@200643|Bacteroidia	976|Bacteroidetes	S	ATP-dependent Clp protease adaptor protein ClpS	clpS	-	-	ko:K06891	-	-	-	-	ko00000	-	-	-	ClpS
BYD3_k127_1505802_6	1168034.FH5T_13775	7.584e-30	124.0	COG1030@1|root,COG1030@2|Bacteria,4NW09@976|Bacteroidetes,2FRYF@200643|Bacteroidia	976|Bacteroidetes	O	Psort location CytoplasmicMembrane, score	-	-	-	-	-	-	-	-	-	-	-	-	NfeD
BYD3_k127_1505802_2	742725.HMPREF9450_02134	1.587e-144	464.0	COG4864@1|root,COG4864@2|Bacteria,4NGG6@976|Bacteroidetes,2FPNC@200643|Bacteroidia	976|Bacteroidetes	S	UPF0365 protein	-	-	-	-	-	-	-	-	-	-	-	-	YdfA_immunity
BYD3_k127_1505802_4	869213.JCM21142_31192	5.535e-55	201.0	COG1011@1|root,COG1011@2|Bacteria,4NM66@976|Bacteroidetes,47UY7@768503|Cytophagia	976|Bacteroidetes	S	HAD-hyrolase-like	yjjG	-	-	ko:K07025	-	-	-	-	ko00000	-	-	-	HAD_2
BYD3_k127_1505802_0	385682.AFSL01000009_gene2472	3.648e-265	840.0	COG0770@1|root,COG0787@1|root,COG0770@2|Bacteria,COG0787@2|Bacteria,4NEXM@976|Bacteroidetes,2FMM3@200643|Bacteroidia,3XIPV@558415|Marinilabiliaceae	976|Bacteroidetes	M	Alanine racemase, C-terminal domain	alr	-	5.1.1.1,6.3.2.10	ko:K01775,ko:K01929	ko00300,ko00473,ko00550,ko01100,ko01502,map00300,map00473,map00550,map01100,map01502	-	R00401,R04573,R04617	RC00064,RC00141,RC00285	ko00000,ko00001,ko01000,ko01011	-	-	-	Ala_racemase_C,Ala_racemase_N,Mur_ligase,Mur_ligase_M
BYD3_k127_1505802_3	1499967.BAYZ01000095_gene4257	4.667e-96	326.0	COG0438@1|root,COG0438@2|Bacteria	2|Bacteria	M	transferase activity, transferring glycosyl groups	-	-	-	ko:K00754	-	-	-	-	ko00000,ko01000	-	GT4	-	Glyco_trans_4_2,Glyco_transf_4,Glycos_transf_1
BYD3_k127_1505802_1	1408473.JHXO01000001_gene2178	2.174e-176	562.0	COG2252@1|root,COG2252@2|Bacteria,4NGCG@976|Bacteroidetes,2FNYM@200643|Bacteroidia	976|Bacteroidetes	S	Permease	yieG	-	-	ko:K06901	-	-	-	-	ko00000,ko02000	2.A.1.40	-	-	Xan_ur_permease
BYD3_k127_1505802_9	742725.HMPREF9450_01157	2.233e-09	64.0	COG2815@1|root,COG2815@2|Bacteria,4NSUI@976|Bacteroidetes,2FPS4@200643|Bacteroidia,22UHM@171550|Rikenellaceae	976|Bacteroidetes	S	PASTA domain	spk1	-	2.7.11.1,6.3.2.4	ko:K01921,ko:K08884,ko:K12132	ko00473,ko00550,ko01100,ko01502,map00473,map00550,map01100,map01502	-	R01150	RC00064,RC00141	ko00000,ko00001,ko01000,ko01001,ko01011	-	-	-	PASTA
BYD3_k127_1523450_1	153721.MYP_4061	1.342e-40	160.0	COG0419@1|root,COG0419@2|Bacteria,4NGQP@976|Bacteroidetes,47MNH@768503|Cytophagia	976|Bacteroidetes	L	chitinase	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_1523450_0	1237149.C900_05269	8.172e-138	463.0	COG4733@1|root,COG4733@2|Bacteria,4NF53@976|Bacteroidetes,47MWJ@768503|Cytophagia	976|Bacteroidetes	S	SPTR Fibronectin type III domain protein	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_1523450_2	1229487.AMYW01000006_gene527	2.94e-07	63.0	COG2911@1|root,COG2911@2|Bacteria,4PKAY@976|Bacteroidetes,1IJ62@117743|Flavobacteriia,2P0JD@237|Flavobacterium	976|Bacteroidetes	S	C-terminal domain of CHU protein family	-	-	-	-	-	-	-	-	-	-	-	-	CHU_C,DUF11,SprB
BYD3_k127_153012_3	1408473.JHXO01000001_gene2077	3.168e-136	440.0	COG0258@1|root,COG0749@1|root,COG0258@2|Bacteria,COG0749@2|Bacteria,4NDVA@976|Bacteroidetes,2FM8X@200643|Bacteroidia	976|Bacteroidetes	L	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity	polA	-	2.7.7.7	ko:K02335	ko00230,ko00240,ko01100,ko03030,ko03410,ko03420,ko03440,map00230,map00240,map01100,map03030,map03410,map03420,map03440	-	R00375,R00376,R00377,R00378	RC02795	ko00000,ko00001,ko01000,ko03032,ko03400	-	-	-	5_3_exonuc,5_3_exonuc_N,DNA_pol_A,DNA_pol_A_exo1
BYD3_k127_153012_7	886379.AEWI01000208_gene2444	2.094e-38	153.0	2B5KV@1|root,31YFX@2|Bacteria,4NQRP@976|Bacteroidetes,2FY4M@200643|Bacteroidia,3XJRV@558415|Marinilabiliaceae	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_153012_4	869213.JCM21142_1685	6.065e-136	467.0	COG5002@1|root,COG5002@2|Bacteria,4PKV1@976|Bacteroidetes	976|Bacteroidetes	T	Histidine kinase	-	-	-	-	-	-	-	-	-	-	-	-	HATPase_c,HisKA,Hpt,PAS_3,PAS_4,PAS_8,Response_reg
BYD3_k127_153012_5	927658.AJUM01000037_gene1842	5.164e-111	366.0	COG1162@1|root,COG1162@2|Bacteria,4NE5H@976|Bacteroidetes,2FNY9@200643|Bacteroidia,3XIJX@558415|Marinilabiliaceae	976|Bacteroidetes	S	RsgA N-terminal domain	rsgA	-	3.1.3.100	ko:K06949	ko00730,ko01100,map00730,map01100	-	R00615,R02135	RC00002,RC00017	ko00000,ko00001,ko01000,ko03009	-	-	-	RsgA_GTPase,RsgA_N
BYD3_k127_153012_6	929556.Solca_1744	7.396e-44	163.0	COG5580@1|root,COG5580@2|Bacteria,4NQ7U@976|Bacteroidetes,1ISR1@117747|Sphingobacteriia	976|Bacteroidetes	O	PFAM Activator of Hsp90 ATPase	-	-	-	-	-	-	-	-	-	-	-	-	AHSA1
BYD3_k127_153012_1	886379.AEWI01000014_gene1416	1.648e-178	567.0	COG0826@1|root,COG0826@2|Bacteria,4NERN@976|Bacteroidetes,2FN1E@200643|Bacteroidia,3XJCU@558415|Marinilabiliaceae	976|Bacteroidetes	O	Peptidase family U32	prtC	-	-	ko:K08303	ko05120,map05120	-	-	-	ko00000,ko00001,ko01000,ko01002	-	-	-	Peptidase_U32
BYD3_k127_153012_0	153721.MYP_924	0.0	1707.0	COG2373@1|root,COG2373@2|Bacteria,4NEW9@976|Bacteroidetes,47MDC@768503|Cytophagia	976|Bacteroidetes	S	Alpha-2-Macroglobulin	-	-	-	ko:K06894	-	-	-	-	ko00000	-	-	-	A2M,A2M_N,A2M_N_2,MG1,Thiol-ester_cl
BYD3_k127_153012_2	385682.AFSL01000040_gene193	2.03e-163	521.0	COG0505@1|root,COG0505@2|Bacteria,4NEQI@976|Bacteroidetes,2FMSR@200643|Bacteroidia,3XIIH@558415|Marinilabiliaceae	976|Bacteroidetes	EF	Carbamoyl-phosphate synthase small chain, CPSase domain	carA	-	6.3.5.5	ko:K01956	ko00240,ko00250,ko01100,map00240,map00250,map01100	M00051	R00256,R00575,R01395,R10948,R10949	RC00002,RC00010,RC00043,RC02750,RC02798,RC03314	ko00000,ko00001,ko00002,ko01000	-	-	-	CPSase_sm_chain,GATase
BYD3_k127_153012_8	1168289.AJKI01000015_gene2209	3.996e-27	114.0	COG0526@1|root,COG0526@2|Bacteria,4NHEC@976|Bacteroidetes,2G2X9@200643|Bacteroidia,3XJH3@558415|Marinilabiliaceae	976|Bacteroidetes	CO	Domain of unknown function (DUF4369)	-	-	-	-	-	-	-	-	-	-	-	-	AhpC-TSA,DUF4369,DUF5106,Thioredoxin_8
BYD3_k127_1562976_7	1150600.ADIARSV_3730	4.423e-90	302.0	COG0329@1|root,COG0329@2|Bacteria,4NFP9@976|Bacteroidetes,1INT7@117747|Sphingobacteriia	976|Bacteroidetes	E	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)	dapA	-	4.3.3.7	ko:K01714	ko00261,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00261,map00300,map01100,map01110,map01120,map01130,map01230	M00016,M00525,M00526,M00527	R10147	RC03062,RC03063	ko00000,ko00001,ko00002,ko01000	-	-	-	DHDPS
BYD3_k127_1562976_9	869213.JCM21142_73017	1.161e-18	94.0	2ENX1@1|root,33GHZ@2|Bacteria,4NXFU@976|Bacteroidetes	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_1562976_2	1168034.FH5T_00665	1.692e-129	429.0	COG1538@1|root,COG1538@2|Bacteria,4NEEN@976|Bacteroidetes,2FM5G@200643|Bacteroidia	976|Bacteroidetes	MU	outer membrane efflux protein	-	-	-	ko:K12340	ko01501,ko01503,ko02020,ko03070,ko04626,ko05133,map01501,map01503,map02020,map03070,map04626,map05133	M00325,M00326,M00339,M00571,M00575,M00646,M00647,M00696,M00697,M00709,M00720,M00821	-	-	ko00000,ko00001,ko00002,ko01504,ko02000,ko02044	1.B.17,2.A.6.2	-	-	OEP
BYD3_k127_1562976_3	1408473.JHXO01000007_gene769	1.29e-117	392.0	COG0845@1|root,COG0845@2|Bacteria,4NFT4@976|Bacteroidetes,2FN2G@200643|Bacteroidia	976|Bacteroidetes	M	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family	-	-	-	ko:K02005	-	-	-	-	ko00000	-	-	-	HlyD_D23
BYD3_k127_1562976_4	1408473.JHXO01000007_gene770	1.275e-116	379.0	COG1136@1|root,COG1136@2|Bacteria,4NE5N@976|Bacteroidetes,2FPB3@200643|Bacteroidia	976|Bacteroidetes	V	ABC transporter, ATP-binding protein	-	-	-	ko:K02003	-	M00258	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	ABC_tran
BYD3_k127_1562976_0	1408473.JHXO01000007_gene771	5.596e-157	504.0	COG0577@1|root,COG0577@2|Bacteria,4NEBD@976|Bacteroidetes,2FM6F@200643|Bacteroidia	976|Bacteroidetes	V	ABC transporter, permease protein	-	-	-	ko:K02004	-	M00258	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	FtsX,MacB_PCD
BYD3_k127_1562976_6	1168034.FH5T_00685	8.482e-99	334.0	COG2972@1|root,COG2972@2|Bacteria,4NGQZ@976|Bacteroidetes,2FMGN@200643|Bacteroidia	976|Bacteroidetes	T	Histidine kinase	cheA	-	-	-	-	-	-	-	-	-	-	-	HATPase_c_5,His_kinase
BYD3_k127_1562976_5	1168034.FH5T_00690	8.079e-110	359.0	COG3279@1|root,COG3279@2|Bacteria,4NI3K@976|Bacteroidetes,2FMT1@200643|Bacteroidia	976|Bacteroidetes	KT	domain protein	-	-	-	-	-	-	-	-	-	-	-	-	LytTR,Response_reg
BYD3_k127_1562976_1	1191523.MROS_0467	2.463e-149	479.0	COG1085@1|root,COG1085@2|Bacteria	2|Bacteria	C	galactose-1-phosphate uridylyltransferase	galT	GO:0003674,GO:0003824,GO:0004335,GO:0005488,GO:0005506,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006012,GO:0006793,GO:0006796,GO:0008108,GO:0008150,GO:0008152,GO:0008198,GO:0008270,GO:0009056,GO:0009987,GO:0016052,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0016779,GO:0019200,GO:0019318,GO:0019320,GO:0019388,GO:0033499,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044262,GO:0044281,GO:0044282,GO:0044424,GO:0044444,GO:0044464,GO:0046365,GO:0046835,GO:0046872,GO:0046914,GO:0070569,GO:0071704,GO:1901575	2.7.7.12	ko:K00965	ko00052,ko00520,ko01100,ko04917,map00052,map00520,map01100,map04917	M00362,M00554,M00632	R00955	RC00002	ko00000,ko00001,ko00002,ko01000	-	-	iECUMN_1333.ECUMN_0842,iYL1228.KPN_00772	GalP_UDP_tr_C,GalP_UDP_transf
BYD3_k127_1562976_8	1168034.FH5T_14425	1.903e-49	186.0	COG1506@1|root,COG1506@2|Bacteria,4NGW1@976|Bacteroidetes,2FV5N@200643|Bacteroidia	976|Bacteroidetes	E	Secretory lipase	-	-	-	-	-	-	-	-	-	-	-	-	LIP,Peptidase_S9
BYD3_k127_1562976_10	1168034.FH5T_14425	1.09e-14	79.0	COG1506@1|root,COG1506@2|Bacteria,4NGW1@976|Bacteroidetes,2FV5N@200643|Bacteroidia	976|Bacteroidetes	E	Secretory lipase	-	-	-	-	-	-	-	-	-	-	-	-	LIP,Peptidase_S9
BYD3_k127_1593254_3	509635.N824_17210	3.835e-07	57.0	COG3408@1|root,COG3408@2|Bacteria,4NFMY@976|Bacteroidetes	976|Bacteroidetes	G	Glycogen debranching enzyme	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_1593254_0	1121875.KB907551_gene1032	1.943e-208	661.0	COG2730@1|root,COG2730@2|Bacteria,4NJM9@976|Bacteroidetes	976|Bacteroidetes	G	Domain of unknown function (DUF5060)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4038,DUF5060
BYD3_k127_1593254_2	1121920.AUAU01000005_gene976	1.573e-32	129.0	2E31H@1|root,32Y1W@2|Bacteria	2|Bacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_1593254_1	1121895.Q765_10160	5.136e-113	371.0	2DBQG@1|root,2ZADX@2|Bacteria,4PKKS@976|Bacteroidetes,1I1VX@117743|Flavobacteriia,2P0E2@237|Flavobacterium	976|Bacteroidetes	S	Domain of Unknown Function (DUF1080)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1080
BYD3_k127_1680358_32	869213.JCM21142_1645	1.372e-24	105.0	COG0060@1|root,COG0060@2|Bacteria,4NEYT@976|Bacteroidetes,47JWU@768503|Cytophagia	976|Bacteroidetes	J	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)	ileS	GO:0003674,GO:0003824,GO:0004812,GO:0004822,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006428,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576	6.1.1.5	ko:K01870	ko00970,map00970	M00359,M00360	R03656	RC00055,RC00523	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	-	-	-	Anticodon_1,tRNA-synt_1
BYD3_k127_1680358_26	886379.AEWI01000119_gene593	1.898e-57	203.0	COG1734@1|root,COG1734@2|Bacteria,4NNID@976|Bacteroidetes,2FSI2@200643|Bacteroidia,3XJZ7@558415|Marinilabiliaceae	976|Bacteroidetes	T	Prokaryotic dksA/traR C4-type zinc finger	yocK	-	-	-	-	-	-	-	-	-	-	-	zf-dskA_traR
BYD3_k127_1680358_21	1168289.AJKI01000027_gene1367	5.732e-73	253.0	COG0597@1|root,COG0597@2|Bacteria,4NEZN@976|Bacteroidetes,2FS30@200643|Bacteroidia,3XJD6@558415|Marinilabiliaceae	976|Bacteroidetes	MU	Signal peptidase (SPase) II	lspA	-	3.4.23.36	ko:K03101	ko03060,map03060	-	-	-	ko00000,ko00001,ko01000,ko01002	-	-	-	Peptidase_A8
BYD3_k127_1680358_31	1337936.IJ00_06745	1.316e-25	110.0	COG2827@1|root,COG2827@2|Bacteria,1GK2X@1117|Cyanobacteria,1HT5P@1161|Nostocales	1117|Cyanobacteria	L	GIY-YIG catalytic domain	-	-	-	ko:K07461	-	-	-	-	ko00000	-	-	-	GIY-YIG
BYD3_k127_1680358_28	679937.Bcop_0664	2.683e-30	123.0	COG0792@1|root,COG0792@2|Bacteria,4NS7E@976|Bacteroidetes,2FSN9@200643|Bacteroidia,4ARBT@815|Bacteroidaceae	976|Bacteroidetes	L	Belongs to the UPF0102 family	-	-	-	ko:K07460	-	-	-	-	ko00000	-	-	-	UPF0102
BYD3_k127_1680358_1	742726.HMPREF9448_02770	0.0	1038.0	COG0073@1|root,COG0143@1|root,COG0073@2|Bacteria,COG0143@2|Bacteria,4NECB@976|Bacteroidetes,2FNV6@200643|Bacteroidia,22WAM@171551|Porphyromonadaceae	976|Bacteroidetes	J	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation	metG	GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:1901360,GO:1901564,GO:1901566,GO:1901576	6.1.1.10	ko:K01874	ko00450,ko00970,map00450,map00970	M00359,M00360	R03659,R04773	RC00055,RC00523	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	-	-	-	Anticodon_1,tRNA-synt_1g,tRNA_bind
BYD3_k127_1680358_18	1229487.AMYW01000001_gene3883	1.743e-85	293.0	COG1619@1|root,COG1619@2|Bacteria,4NF5Q@976|Bacteroidetes,1HXC6@117743|Flavobacteriia,2NUA0@237|Flavobacterium	976|Bacteroidetes	V	Peptidase S66	ykfA	-	3.4.17.13	ko:K01297	-	-	-	-	ko00000,ko01000,ko01002,ko01011	-	-	-	Peptidase_S66
BYD3_k127_1680358_29	1346330.M472_19230	3.874e-30	123.0	COG0399@1|root,COG0399@2|Bacteria,4PKRF@976|Bacteroidetes,1IU6R@117747|Sphingobacteriia	976|Bacteroidetes	J	23S rRNA-intervening sequence protein	-	-	-	-	-	-	-	-	-	-	-	-	23S_rRNA_IVP
BYD3_k127_1680358_14	385682.AFSL01000006_gene2310	1.193e-106	359.0	COG0741@1|root,COG0741@2|Bacteria,4NEKW@976|Bacteroidetes,2FM5V@200643|Bacteroidia,3XJ7I@558415|Marinilabiliaceae	976|Bacteroidetes	M	Lysin motif	mltD	-	-	ko:K08307	-	-	-	-	ko00000,ko01000,ko01011	-	-	-	LysM,SLT
BYD3_k127_1680358_36	1042376.AFPK01000036_gene1900	9.018e-13	70.0	COG1826@1|root,COG1826@2|Bacteria,4NUNH@976|Bacteroidetes,1I54R@117743|Flavobacteriia,406M9@61432|unclassified Flavobacteriaceae	976|Bacteroidetes	U	mttA/Hcf106 family	tatA	-	-	ko:K03116	ko03060,ko03070,map03060,map03070	M00336	-	-	ko00000,ko00001,ko00002,ko02044	2.A.64	-	-	MttA_Hcf106
BYD3_k127_1680358_8	1137281.D778_01957	2.344e-148	482.0	COG0750@1|root,COG0750@2|Bacteria,4NEAR@976|Bacteroidetes,1HXEV@117743|Flavobacteriia	976|Bacteroidetes	M	zinc metalloprotease	rseP	-	-	ko:K11749	ko02024,ko04112,map02024,map04112	-	-	-	ko00000,ko00001,ko01000,ko01002	-	-	-	PDZ,PDZ_2,Peptidase_M50
BYD3_k127_1680358_7	886379.AEWI01000037_gene2957	3.644e-152	489.0	COG0743@1|root,COG0743@2|Bacteria,4NG0S@976|Bacteroidetes,2FN5M@200643|Bacteroidia,3XJCF@558415|Marinilabiliaceae	976|Bacteroidetes	I	1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal	dxr	GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0006081,GO:0006082,GO:0006090,GO:0006629,GO:0006644,GO:0006720,GO:0006721,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0008654,GO:0009058,GO:0009240,GO:0009987,GO:0016114,GO:0016491,GO:0016614,GO:0016616,GO:0019288,GO:0019637,GO:0019682,GO:0019752,GO:0030145,GO:0030604,GO:0032787,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0046490,GO:0046872,GO:0046914,GO:0048037,GO:0050661,GO:0050662,GO:0051483,GO:0051484,GO:0055114,GO:0070402,GO:0071704,GO:0090407,GO:0097159,GO:1901135,GO:1901265,GO:1901363,GO:1901576	1.1.1.267	ko:K00099	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	M00096	R05688	RC01452	ko00000,ko00001,ko00002,ko01000	-	-	-	DXPR_C,DXP_redisom_C,DXP_reductoisom
BYD3_k127_1680358_20	1168289.AJKI01000063_gene3488	3.992e-80	276.0	COG0739@1|root,COG0739@2|Bacteria,4NFZN@976|Bacteroidetes,2FMIQ@200643|Bacteroidia,3XJWX@558415|Marinilabiliaceae	976|Bacteroidetes	M	Peptidase family M23	nlpD_1	-	-	-	-	-	-	-	-	-	-	-	Peptidase_M23
BYD3_k127_1680358_2	1168289.AJKI01000011_gene382	3.786e-273	853.0	COG0034@1|root,COG0034@2|Bacteria,4NFSM@976|Bacteroidetes,2FM3Y@200643|Bacteroidia,3XIMJ@558415|Marinilabiliaceae	976|Bacteroidetes	F	Class II glutamine amidotransferase	purF	-	2.4.2.14	ko:K00764	ko00230,ko00250,ko01100,ko01110,ko01130,map00230,map00250,map01100,map01110,map01130	M00048	R01072	RC00010,RC02724,RC02752	ko00000,ko00001,ko00002,ko01000,ko01002	-	-	-	GATase_7
BYD3_k127_1680358_33	927658.AJUM01000040_gene913	2.44e-18	91.0	2E2TU@1|root,32XVZ@2|Bacteria,4NVA0@976|Bacteroidetes,2FUX1@200643|Bacteroidia,3XK32@558415|Marinilabiliaceae	976|Bacteroidetes	S	Sporulation related domain	-	-	-	-	-	-	-	-	-	-	-	-	SPOR
BYD3_k127_1680358_11	929556.Solca_4009	2.15e-123	425.0	COG1629@1|root,COG1629@2|Bacteria,4PM9F@976|Bacteroidetes,1J0IR@117747|Sphingobacteriia	976|Bacteroidetes	P	transport	-	-	-	-	-	-	-	-	-	-	-	-	CarboxypepD_reg,Plug
BYD3_k127_1680358_15	886379.AEWI01000018_gene1281	1.347e-100	333.0	COG0217@1|root,COG0217@2|Bacteria,4NE8Y@976|Bacteroidetes,2FW6T@200643|Bacteroidia,3XJEZ@558415|Marinilabiliaceae	976|Bacteroidetes	K	Transcriptional regulator	-	-	-	-	-	-	-	-	-	-	-	-	Transcrip_reg
BYD3_k127_1680358_35	1121094.KB894665_gene2806	4.449e-13	68.0	COG0119@1|root,COG0119@2|Bacteria,4NEIT@976|Bacteroidetes,2FNX8@200643|Bacteroidia,4AKES@815|Bacteroidaceae	976|Bacteroidetes	E	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)	leuA	-	2.3.3.13	ko:K01649	ko00290,ko00620,ko01100,ko01110,ko01210,ko01230,map00290,map00620,map01100,map01110,map01210,map01230	M00432	R01213	RC00004,RC00470,RC02754	br01601,ko00000,ko00001,ko00002,ko01000	-	-	-	HMGL-like,LeuA_dimer
BYD3_k127_1680358_5	1408473.JHXO01000004_gene214	5.193e-222	695.0	COG0119@1|root,COG0119@2|Bacteria,4NEIT@976|Bacteroidetes,2FNX8@200643|Bacteroidia	976|Bacteroidetes	E	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)	leuA	-	2.3.3.13	ko:K01649	ko00290,ko00620,ko01100,ko01110,ko01210,ko01230,map00290,map00620,map01100,map01110,map01210,map01230	M00432	R01213	RC00004,RC00470,RC02754	br01601,ko00000,ko00001,ko00002,ko01000	-	-	-	HMGL-like,LeuA_dimer
BYD3_k127_1680358_3	927658.AJUM01000037_gene2160	8.597e-237	738.0	COG0065@1|root,COG0065@2|Bacteria,4NG7E@976|Bacteroidetes,2FMCX@200643|Bacteroidia,3XISS@558415|Marinilabiliaceae	976|Bacteroidetes	E	Aconitase family (aconitate hydratase)	leuC	-	4.2.1.33,4.2.1.35	ko:K01703	ko00290,ko00660,ko00966,ko01100,ko01110,ko01210,ko01230,map00290,map00660,map00966,map01100,map01110,map01210,map01230	M00432,M00535	R03896,R03898,R03968,R04001,R08620,R08624,R08628,R08634,R08641,R08645,R10170	RC00497,RC00976,RC00977,RC01041,RC01046,RC03072	br01601,ko00000,ko00001,ko00002,ko01000	-	-	-	Aconitase
BYD3_k127_1680358_17	886379.AEWI01000023_gene36	8.292e-88	293.0	COG0066@1|root,COG0066@2|Bacteria,4NDVY@976|Bacteroidetes,2FNIN@200643|Bacteroidia,3XJ85@558415|Marinilabiliaceae	976|Bacteroidetes	E	Aconitase C-terminal domain	leuD	-	4.2.1.33,4.2.1.35	ko:K01704	ko00290,ko00660,ko01100,ko01110,ko01210,ko01230,map00290,map00660,map01100,map01110,map01210,map01230	M00432,M00535	R03896,R03898,R03968,R04001,R10170	RC00976,RC00977,RC01041,RC01046,RC03072	br01601,ko00000,ko00001,ko00002,ko01000	-	-	-	Aconitase_C
BYD3_k127_1680358_30	1168034.FH5T_02850	4.994e-26	111.0	2DNS7@1|root,32YWC@2|Bacteria,4NSJ6@976|Bacteroidetes,2G3HH@200643|Bacteroidia	976|Bacteroidetes	J	ribosomal protein	-	-	-	-	-	-	-	-	-	-	-	-	23S_rRNA_IVP
BYD3_k127_1680358_4	1408473.JHXO01000004_gene211	6.083e-223	700.0	COG0119@1|root,COG0119@2|Bacteria,4NF3N@976|Bacteroidetes,2FKYJ@200643|Bacteroidia	976|Bacteroidetes	E	Belongs to the alpha-IPM synthase homocitrate synthase family	leuA_1	-	2.3.1.182	ko:K09011	ko00290,ko00660,ko01100,ko01210,ko01230,map00290,map00660,map01100,map01210,map01230	M00535	R07399	RC00004,RC01205	br01601,ko00000,ko00001,ko00002,ko01000	-	-	-	HMGL-like,LeuA_dimer
BYD3_k127_1680358_6	1313304.CALK_2071	9.813e-173	546.0	COG0473@1|root,COG0473@2|Bacteria	2|Bacteria	CE	3-isopropylmalate dehydrogenase activity	leuB	GO:0003674,GO:0003824,GO:0003862,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008150,GO:0008152,GO:0016491,GO:0016614,GO:0016616,GO:0040007,GO:0044424,GO:0044464,GO:0055114	1.1.1.85	ko:K00052	ko00290,ko00660,ko01100,ko01110,ko01210,ko01230,map00290,map00660,map01100,map01110,map01210,map01230	M00432,M00535	R00994,R04426,R10052	RC00084,RC00417,RC03036	br01601,ko00000,ko00001,ko00002,ko01000	-	-	-	Iso_dh
BYD3_k127_1680358_38	1121904.ARBP01000004_gene985	1.922e-05	55.0	COG5608@1|root,COG5608@2|Bacteria	2|Bacteria	S	Late embryogenesis abundant protein	-	-	-	-	-	-	-	-	-	-	-	-	LEA_2
BYD3_k127_1680358_19	439235.Dalk_0815	4.644e-85	287.0	COG2518@1|root,COG2518@2|Bacteria,1MXQC@1224|Proteobacteria,42QXM@68525|delta/epsilon subdivisions,2WMZI@28221|Deltaproteobacteria,2MNC9@213118|Desulfobacterales	28221|Deltaproteobacteria	O	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins	pcm	-	2.1.1.77	ko:K00573	-	-	-	-	ko00000,ko01000	-	-	-	PCMT
BYD3_k127_1680358_22	153721.MYP_244	1.121e-68	259.0	COG0457@1|root,COG0823@1|root,COG2885@1|root,COG0457@2|Bacteria,COG0823@2|Bacteria,COG2885@2|Bacteria,4NHCE@976|Bacteroidetes,47NZ4@768503|Cytophagia	976|Bacteroidetes	MU	OmpA family	-	-	-	-	-	-	-	-	-	-	-	-	OmpA,PD40
BYD3_k127_1680358_39	886379.AEWI01000013_gene2210	0.0001779	55.0	2BWF5@1|root,33WNE@2|Bacteria,4P2ZX@976|Bacteroidetes,2G1MX@200643|Bacteroidia,3XJZA@558415|Marinilabiliaceae	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	SPOR
BYD3_k127_1680358_23	999419.HMPREF1077_01860	2.939e-66	233.0	COG2755@1|root,COG2755@2|Bacteria,4NFN6@976|Bacteroidetes,2FKZ2@200643|Bacteroidia,22W3N@171551|Porphyromonadaceae	976|Bacteroidetes	E	GSCFA family	-	-	-	-	-	-	-	-	-	-	-	-	GSCFA
BYD3_k127_1680358_34	1235813.JCM10003_3682	1.1e-16	82.0	COG2755@1|root,COG2755@2|Bacteria,4NFN6@976|Bacteroidetes,2FKZ2@200643|Bacteroidia,4AKGA@815|Bacteroidaceae	976|Bacteroidetes	E	GSCFA family	-	-	-	-	-	-	-	-	-	-	-	-	GSCFA
BYD3_k127_1680358_25	1121346.KB899821_gene2676	2.595e-59	215.0	COG2267@1|root,COG2267@2|Bacteria,1UZ5S@1239|Firmicutes,4HEHP@91061|Bacilli,275E1@186822|Paenibacillaceae	91061|Bacilli	I	Serine aminopeptidase, S33	-	-	3.1.1.5	ko:K01048	ko00564,map00564	-	-	-	ko00000,ko00001,ko01000	-	-	-	Hydrolase_4
BYD3_k127_1680358_12	1121129.KB903359_gene1394	2.834e-122	400.0	COG3176@1|root,COG3176@2|Bacteria,4PKEK@976|Bacteroidetes,2FKZ3@200643|Bacteroidia,22W0V@171551|Porphyromonadaceae	976|Bacteroidetes	S	Hemolysin	-	-	-	-	-	-	-	-	-	-	-	-	Acetyltransf_5
BYD3_k127_1680358_27	1168034.FH5T_07050	4.336e-51	183.0	COG0509@1|root,COG0509@2|Bacteria,4NQ35@976|Bacteroidetes,2FT3J@200643|Bacteroidia	976|Bacteroidetes	E	The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein	gcvH	-	-	ko:K02437	ko00260,ko00630,ko01100,ko01110,ko01130,ko01200,map00260,map00630,map01100,map01110,map01130,map01200	M00532	R01221	RC00022,RC02834	ko00000,ko00001,ko00002	-	-	-	GCV_H
BYD3_k127_1680358_0	1408473.JHXO01000001_gene2295	0.0	2150.0	COG4797@1|root,COG4797@2|Bacteria,4PKQS@976|Bacteroidetes,2FP69@200643|Bacteroidia	976|Bacteroidetes	S	Motility related/secretion protein	sprA	-	-	-	-	-	-	-	-	-	-	-	SprA_N
BYD3_k127_1680358_24	869213.JCM21142_93719	2.744e-62	219.0	COG0632@1|root,COG0632@2|Bacteria,4NF4E@976|Bacteroidetes,47N8D@768503|Cytophagia	976|Bacteroidetes	L	The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB	ruvA	-	3.6.4.12	ko:K03550	ko03440,map03440	-	-	-	ko00000,ko00001,ko01000,ko03400	-	-	-	HHH_5,RuvA_C,RuvA_N
BYD3_k127_1680358_9	1408473.JHXO01000001_gene2293	1.641e-145	468.0	COG1995@1|root,COG1995@2|Bacteria,4NEUR@976|Bacteroidetes,2FN0X@200643|Bacteroidia	976|Bacteroidetes	C	Belongs to the PdxA family	pdxA	-	1.1.1.262	ko:K00097	ko00750,ko01100,map00750,map01100	M00124	R05681,R05837,R07406	RC00089,RC00675,RC01475	ko00000,ko00001,ko00002,ko01000	-	-	-	PdxA
BYD3_k127_1680358_37	927658.AJUM01000037_gene1916	1.217e-05	53.0	2EHT5@1|root,33BIV@2|Bacteria,4NXXG@976|Bacteroidetes,2G296@200643|Bacteroidia,3XKEF@558415|Marinilabiliaceae	976|Bacteroidetes	S	Domain of unknown function (DUF4834)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4834
BYD3_k127_1680358_13	445970.ALIPUT_01337	1.145e-108	357.0	COG1127@1|root,COG1127@2|Bacteria,4NETG@976|Bacteroidetes,2FM5W@200643|Bacteroidia,22U53@171550|Rikenellaceae	976|Bacteroidetes	Q	ABC transporter	metN	-	-	ko:K02065	ko02010,map02010	M00210,M00669,M00670	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.27	-	-	ABC_tran
BYD3_k127_1680358_16	1168289.AJKI01000044_gene106	6.274e-90	302.0	COG0767@1|root,COG0767@2|Bacteria,4NEZ8@976|Bacteroidetes,2FNVR@200643|Bacteroidia,3XIZS@558415|Marinilabiliaceae	976|Bacteroidetes	Q	Permease MlaE	mlaE	-	-	ko:K02066	ko02010,map02010	M00210,M00669,M00670	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.27	-	-	MlaE
BYD3_k127_1680358_10	997884.HMPREF1068_04167	7.735e-144	464.0	COG0836@1|root,COG0836@2|Bacteria,4NE1Y@976|Bacteroidetes,2FNHF@200643|Bacteroidia,4AK7A@815|Bacteroidaceae	976|Bacteroidetes	M	mannose-1-phosphate guanylyltransferase	manC	-	2.7.7.13	ko:K00971	ko00051,ko00520,ko01100,ko01110,map00051,map00520,map01100,map01110	M00114,M00361,M00362	R00885	RC00002	ko00000,ko00001,ko00002,ko01000	-	-	-	NTP_transferase
BYD3_k127_1734671_0	1237149.C900_03649	3.523e-105	379.0	COG2203@1|root,COG3292@1|root,COG4191@1|root,COG2203@2|Bacteria,COG3292@2|Bacteria,COG4191@2|Bacteria,4NK8Q@976|Bacteroidetes,47M6U@768503|Cytophagia	976|Bacteroidetes	KT	PFAM Y_Y_Y domain	-	-	-	-	-	-	-	-	-	-	-	-	GAF_2,HATPase_c,HTH_18,HisKA,HisKA_2,Reg_prop,Response_reg,SpoIIE,Y_Y_Y
BYD3_k127_1767362_2	643867.Ftrac_1238	1.17e-08	63.0	COG3064@1|root,COG3064@2|Bacteria,4NEVD@976|Bacteroidetes,47KE6@768503|Cytophagia	976|Bacteroidetes	M	TIGRFAM Bacteroidetes-specific	-	-	-	-	-	-	-	-	-	-	-	-	PorP_SprF
BYD3_k127_1767362_0	1123248.KB893338_gene2320	5.126e-58	226.0	COG3405@1|root,COG3405@2|Bacteria	2|Bacteria	G	Belongs to the glycosyl hydrolase 8 (cellulase D) family	-	-	-	-	-	-	-	-	-	-	-	-	ASH,CBM_15,DUF1573
BYD3_k127_1767362_1	1313421.JHBV01000050_gene127	4.337e-15	89.0	COG3209@1|root,COG3291@1|root,COG3209@2|Bacteria,COG3291@2|Bacteria,4NDZC@976|Bacteroidetes,1IV4S@117747|Sphingobacteriia	976|Bacteroidetes	M	Immunoglobulin	-	-	-	-	-	-	-	-	-	-	-	-	CHU_C,SprB
BYD3_k127_1790149_3	1519464.HY22_01480	3.998e-177	569.0	COG0841@1|root,COG0841@2|Bacteria	2|Bacteria	V	transmembrane transporter activity	-	-	-	-	-	-	-	-	-	-	-	-	ACR_tran
BYD3_k127_1790149_7	1121904.ARBP01000017_gene5150	8.61e-76	266.0	COG0845@1|root,COG0845@2|Bacteria,4NF23@976|Bacteroidetes,47MIB@768503|Cytophagia	976|Bacteroidetes	M	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family	-	-	-	-	-	-	-	-	-	-	-	-	Biotin_lipoyl_2,HlyD_3,HlyD_D23
BYD3_k127_1790149_6	1121904.ARBP01000010_gene2417	1.83e-81	288.0	COG1538@1|root,COG1538@2|Bacteria,4NE4S@976|Bacteroidetes,47KIE@768503|Cytophagia	976|Bacteroidetes	MU	PFAM Outer membrane efflux protein	-	-	-	-	-	-	-	-	-	-	-	-	OEP
BYD3_k127_1790149_8	456442.Mboo_0396	1.225e-15	82.0	COG1846@1|root,arCOG03182@2157|Archaea	2157|Archaea	K	Regulatory protein MarR	-	-	-	-	-	-	-	-	-	-	-	-	MarR,MarR_2
BYD3_k127_1790149_5	1121875.KB907546_gene2375	8.506e-110	369.0	COG2942@1|root,COG2942@2|Bacteria,4NEH7@976|Bacteroidetes,1HY0E@117743|Flavobacteriia	976|Bacteroidetes	G	Catalyzes the reversible epimerization of cellobiose to 4-O-beta-D-glucopyranosyl-D-mannose (Glc-Man)	-	-	5.1.3.11	ko:K16213	-	-	R01445,R10810	RC00289	ko00000,ko01000	-	-	-	GlcNAc_2-epim
BYD3_k127_1790149_2	1408473.JHXO01000012_gene331	9.574e-193	610.0	COG1748@1|root,COG1748@2|Bacteria,4NFM8@976|Bacteroidetes	976|Bacteroidetes	E	Saccharopine dehydrogenase	-	-	1.5.1.10,1.5.1.7	ko:K00290,ko:K00293	ko00300,ko00310,ko01100,ko01110,ko01130,ko01230,map00300,map00310,map01100,map01110,map01130,map01230	M00030,M00032	R00715,R02315	RC00215,RC00217,RC00225,RC01532	ko00000,ko00001,ko00002,ko01000	-	-	-	Sacchrp_dh_C,Sacchrp_dh_NADP
BYD3_k127_1790149_4	1408473.JHXO01000012_gene332	7.826e-128	420.0	COG0686@1|root,COG0686@2|Bacteria,4NF46@976|Bacteroidetes,2FW97@200643|Bacteroidia	976|Bacteroidetes	E	Alanine dehydrogenase/PNT, N-terminal domain	-	-	-	-	-	-	-	-	-	-	-	-	AlaDh_PNT_C,AlaDh_PNT_N
BYD3_k127_1790149_0	1408473.JHXO01000012_gene333	1.847e-251	784.0	COG1012@1|root,COG1012@2|Bacteria,4NFTW@976|Bacteroidetes,2FQQ7@200643|Bacteroidia	976|Bacteroidetes	C	Belongs to the aldehyde dehydrogenase family	-	-	1.2.1.3,1.2.1.88,1.5.5.2	ko:K00128,ko:K13821	ko00010,ko00053,ko00071,ko00250,ko00280,ko00310,ko00330,ko00340,ko00380,ko00410,ko00561,ko00620,ko00625,ko00903,ko00981,ko01100,ko01110,ko01120,ko01130,map00010,map00053,map00071,map00250,map00280,map00310,map00330,map00340,map00380,map00410,map00561,map00620,map00625,map00903,map00981,map01100,map01110,map01120,map01130	M00135	R00245,R00264,R00631,R00707,R00708,R00710,R00904,R01253,R01752,R01986,R02549,R02678,R02940,R02957,R03283,R03869,R04065,R04444,R04445,R04506,R04903,R05050,R05051,R05237,R05238,R05286,R06366,R08146	RC00047,RC00071,RC00080,RC00083,RC00186,RC00216,RC00218,RC00242,RC00255,RC00816,RC01500	ko00000,ko00001,ko00002,ko01000,ko03000	-	-	-	Aldedh,Pro_dh
BYD3_k127_1790149_1	1408473.JHXO01000001_gene2330	3.048e-213	674.0	COG0008@1|root,COG0008@2|Bacteria,4NEED@976|Bacteroidetes,2FN2D@200643|Bacteroidia	976|Bacteroidetes	J	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)	gltX	-	6.1.1.17	ko:K01885	ko00860,ko00970,ko01100,ko01110,ko01120,map00860,map00970,map01100,map01110,map01120	M00121,M00359,M00360	R05578	RC00055,RC00523	ko00000,ko00001,ko00002,ko01000,ko01007,ko02048,ko03016	-	-	-	tRNA-synt_1c
BYD3_k127_1790149_9	1121877.JQKF01000028_gene2127	3.153e-05	47.0	COG0500@1|root,COG2226@2|Bacteria,2GKFZ@201174|Actinobacteria,4CN6D@84992|Acidimicrobiia	84992|Acidimicrobiia	H	Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2)	menG	-	2.1.1.163,2.1.1.201	ko:K03183	ko00130,ko01100,ko01110,map00130,map01100,map01110	M00116,M00117	R04990,R04993,R06859,R08774,R09736	RC00003,RC01253,RC01662	ko00000,ko00001,ko00002,ko01000	-	-	-	Ubie_methyltran
BYD3_k127_1802490_0	1168034.FH5T_09380	2.72e-178	568.0	COG2204@1|root,COG2204@2|Bacteria,4NE89@976|Bacteroidetes,2FWYQ@200643|Bacteroidia	976|Bacteroidetes	T	Sigma-54 interaction domain	-	-	-	-	-	-	-	-	-	-	-	-	Response_reg,Sigma54_activat
BYD3_k127_1802490_2	1237149.C900_05462	6.679e-100	356.0	COG4251@1|root,COG4251@2|Bacteria,4PM7A@976|Bacteroidetes	976|Bacteroidetes	T	His Kinase A (phosphoacceptor) domain	-	-	-	-	-	-	-	-	-	-	-	-	GAF,HATPase_c,HNOBA,HisKA,PAS_3,PAS_9,Response_reg
BYD3_k127_1802490_3	694427.Palpr_1243	2.25e-92	311.0	COG1968@1|root,COG1968@2|Bacteria,4NGIZ@976|Bacteroidetes,2FMST@200643|Bacteroidia,22X3R@171551|Porphyromonadaceae	976|Bacteroidetes	V	Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin	uppP	-	3.6.1.27	ko:K06153	ko00550,map00550	-	R05627	RC00002	ko00000,ko00001,ko01000,ko01011	-	-	-	BacA
BYD3_k127_1802490_1	1121012.AUKX01000053_gene2558	4.712e-100	332.0	COG0708@1|root,COG0708@2|Bacteria,4NEY3@976|Bacteroidetes,1HYMY@117743|Flavobacteriia,23G5I@178469|Arenibacter	976|Bacteroidetes	L	Endonuclease/Exonuclease/phosphatase family	xth	-	3.1.11.2	ko:K01142	ko03410,map03410	-	-	-	ko00000,ko00001,ko01000,ko03400	-	-	-	Exo_endo_phos
BYD3_k127_1802490_5	1038869.AXAN01000005_gene5504	8.864e-11	68.0	COG0782@1|root,COG0782@2|Bacteria,1MZNY@1224|Proteobacteria,2VVRV@28216|Betaproteobacteria,1K8FR@119060|Burkholderiaceae	28216|Betaproteobacteria	K	Elongation factor	rnk	-	-	ko:K06140	-	-	-	-	ko00000,ko03000	-	-	-	GreA_GreB,Rnk_N
BYD3_k127_1802490_4	1499967.BAYZ01000163_gene6587	1.447e-32	132.0	COG0782@1|root,COG0782@2|Bacteria	2|Bacteria	K	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus	rnk	-	-	ko:K03624,ko:K06140	-	-	-	-	ko00000,ko03000,ko03021	-	-	-	Acetyltransf_3,GreA_GreB,Rnk_N
BYD3_k127_1828731_3	1123008.KB905694_gene1487	3.9e-33	141.0	COG0810@1|root,COG4219@1|root,COG0810@2|Bacteria,COG4219@2|Bacteria,4NDWS@976|Bacteroidetes,2FNCU@200643|Bacteroidia,22X60@171551|Porphyromonadaceae	976|Bacteroidetes	KMT	Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins	-	-	-	-	-	-	-	-	-	-	-	-	CarbopepD_reg_2,Peptidase_M56,TonB_C
BYD3_k127_1828731_2	1168034.FH5T_18880	4.646e-34	134.0	COG3682@1|root,COG3682@2|Bacteria,4NNVM@976|Bacteroidetes,2FTZK@200643|Bacteroidia	976|Bacteroidetes	K	transcriptional regulator	-	-	-	-	-	-	-	-	-	-	-	-	Penicillinase_R
BYD3_k127_1828731_1	1211813.CAPH01000018_gene1083	8.89e-98	324.0	COG0299@1|root,COG3340@1|root,COG0299@2|Bacteria,COG3340@2|Bacteria,4NEXW@976|Bacteroidetes,2FQTC@200643|Bacteroidia,22U8N@171550|Rikenellaceae	976|Bacteroidetes	E	Belongs to the peptidase S51 family	pepE	-	3.4.13.21	ko:K05995	-	-	-	-	ko00000,ko01000,ko01002	-	-	-	Peptidase_S51
BYD3_k127_1828731_0	449673.BACSTE_03215	4.128e-112	373.0	COG2017@1|root,COG2017@2|Bacteria,4NF5G@976|Bacteroidetes,2FQAK@200643|Bacteroidia,4AKSA@815|Bacteroidaceae	976|Bacteroidetes	G	Converts alpha-aldose to the beta-anomer	-	-	5.1.3.3	ko:K01785	ko00010,ko00052,ko01100,ko01110,ko01120,ko01130,map00010,map00052,map01100,map01110,map01120,map01130	M00632	R01602,R10619	RC00563	ko00000,ko00001,ko00002,ko01000	-	-	-	Aldose_epim
BYD3_k127_1879228_4	1121100.JCM6294_3301	6.964e-08	54.0	COG0574@1|root,COG0574@2|Bacteria,4NGSQ@976|Bacteroidetes,2FS98@200643|Bacteroidia,4AT35@815|Bacteroidaceae	976|Bacteroidetes	G	Pyruvate phosphate dikinase, PEP pyruvate binding domain	ppsA	-	-	-	-	-	-	-	-	-	-	-	PPDK_N,Response_reg
BYD3_k127_1879228_3	886379.AEWI01000008_gene681	2.661e-58	213.0	COG0589@1|root,COG0589@2|Bacteria,4NHBB@976|Bacteroidetes,2FPV4@200643|Bacteroidia,3XITD@558415|Marinilabiliaceae	976|Bacteroidetes	T	Putative prokaryotic signal transducing protein	uspA	-	-	-	-	-	-	-	-	-	-	-	DUF2007,Usp
BYD3_k127_1879228_0	694427.Palpr_0130	1.413e-175	564.0	COG1233@1|root,COG1233@2|Bacteria,4NF7K@976|Bacteroidetes,2FRUW@200643|Bacteroidia,22Y1X@171551|Porphyromonadaceae	976|Bacteroidetes	Q	Flavin containing amine oxidoreductase	-	-	1.3.99.26,1.3.99.28,1.3.99.29,1.3.99.31	ko:K10027	ko00906,ko01100,ko01110,map00906,map01100,map01110	-	R04787,R04798,R04800,R09691,R09692	RC01214,RC02088,RC02605	ko00000,ko00001,ko01000	-	-	-	Amino_oxidase
BYD3_k127_1879228_1	694427.Palpr_0129	8.652e-114	377.0	COG1562@1|root,COG1562@2|Bacteria	2|Bacteria	I	ergosterol biosynthetic process	-	-	2.5.1.32,2.5.1.99	ko:K02291	ko00906,ko01062,ko01100,ko01110,map00906,map01062,map01100,map01110	M00097	R02065,R04218,R07270,R10177	RC00362,RC01101,RC02869	ko00000,ko00001,ko00002,ko01000,ko01006	-	-	-	SQS_PSY
BYD3_k127_1879228_2	929556.Solca_0004	8.885e-72	248.0	COG1704@1|root,COG1704@2|Bacteria,4NMD3@976|Bacteroidetes,1IS2G@117747|Sphingobacteriia	976|Bacteroidetes	S	LemA family	lemA	-	-	ko:K03744	-	-	-	-	ko00000	-	-	-	LemA
BYD3_k127_1925369_1	1168034.FH5T_12530	8.485e-164	525.0	COG0305@1|root,COG0305@2|Bacteria,4NF8P@976|Bacteroidetes,2FNG7@200643|Bacteroidia	976|Bacteroidetes	L	Participates in initiation and elongation during chromosome replication	dnaB	-	3.6.4.12	ko:K02314	ko03030,ko04112,map03030,map04112	-	-	-	ko00000,ko00001,ko01000,ko03032	-	-	-	DnaB,DnaB_C
BYD3_k127_1925369_0	1158294.JOMI01000009_gene809	2.686e-250	789.0	COG3023@1|root,COG3023@2|Bacteria,4PKIH@976|Bacteroidetes,2G0QV@200643|Bacteroidia	976|Bacteroidetes	V	Glycosyl-hydrolase 97 C-terminal, oligomerisation	-	-	3.2.1.20	ko:K01187	ko00052,ko00500,ko01100,map00052,map00500,map01100	-	R00028,R00801,R00802,R06087,R06088	RC00028,RC00049,RC00077	ko00000,ko00001,ko01000	-	GH31	-	GH97_C,GH97_N,Glyco_hydro_97
BYD3_k127_1925369_2	1124780.ANNU01000016_gene1839	8.67e-27	113.0	COG1572@1|root,COG1572@2|Bacteria,4PP87@976|Bacteroidetes	976|Bacteroidetes	NU	bacterial-type flagellum-dependent cell motility	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_1932703_11	999419.HMPREF1077_00485	1.197e-37	144.0	COG1022@1|root,COG1022@2|Bacteria,4NGFQ@976|Bacteroidetes,2FN1X@200643|Bacteroidia,22W8F@171551|Porphyromonadaceae	976|Bacteroidetes	I	Long-chain fatty acid--CoA ligase	-	-	6.2.1.3	ko:K01897	ko00061,ko00071,ko01100,ko01212,ko02024,ko03320,ko04146,ko04216,ko04714,ko04920,map00061,map00071,map01100,map01212,map02024,map03320,map04146,map04216,map04714,map04920	M00086	R01280	RC00004,RC00014	ko00000,ko00001,ko00002,ko01000,ko01004,ko04147	4.C.1.1	-	-	AMP-binding
BYD3_k127_1932703_4	742766.HMPREF9455_01452	8.767e-214	683.0	COG3250@1|root,COG3250@2|Bacteria,4NEDP@976|Bacteroidetes,2G05U@200643|Bacteroidia,22W8D@171551|Porphyromonadaceae	976|Bacteroidetes	G	Pfam:DUF303	-	-	3.1.1.53	ko:K05970	-	-	-	-	ko00000,ko01000	-	-	-	BetaGal_dom4_5,Glyco_hydro_2_N,SASA
BYD3_k127_1932703_7	203119.Cthe_0732	6.723e-75	269.0	COG0082@1|root,COG0082@2|Bacteria,1TQ40@1239|Firmicutes,24998@186801|Clostridia,3WG94@541000|Ruminococcaceae	186801|Clostridia	E	Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system	aroC	-	4.2.3.5	ko:K01736	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	M00022	R01714	RC00586	ko00000,ko00001,ko00002,ko01000	-	-	-	Chorismate_synt
BYD3_k127_1932703_5	720554.Clocl_3296	5.463e-127	419.0	COG0128@1|root,COG0128@2|Bacteria,1TPIH@1239|Firmicutes,2488G@186801|Clostridia,3WG99@541000|Ruminococcaceae	186801|Clostridia	E	Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate	aroA	-	2.5.1.19	ko:K00800	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	M00022	R03460	RC00350	ko00000,ko00001,ko00002,ko01000	-	-	-	EPSP_synthase
BYD3_k127_1932703_0	886379.AEWI01000007_gene813	0.0	1127.0	COG0188@1|root,COG0188@2|Bacteria,4NERI@976|Bacteroidetes,2FPAU@200643|Bacteroidia,3XJ07@558415|Marinilabiliaceae	976|Bacteroidetes	L	DNA Topoisomerase IV	parC	-	-	ko:K02621	-	-	-	-	ko00000,ko01000,ko02048,ko03032,ko03036	-	-	-	DNA_topoisoIV
BYD3_k127_1932703_1	927658.AJUM01000037_gene2250	1.56e-291	905.0	COG0187@1|root,COG0187@2|Bacteria,4NF18@976|Bacteroidetes,2FMMD@200643|Bacteroidia,3XJF2@558415|Marinilabiliaceae	976|Bacteroidetes	L	TopoisomeraseII	parE	-	-	ko:K02622	-	-	-	-	ko00000,ko01000,ko02048,ko03032,ko03036	-	-	-	DNA_gyraseB,DNA_gyraseB_C,HATPase_c,Toprim
BYD3_k127_1932703_2	1408473.JHXO01000011_gene2976	8.279e-273	849.0	COG1190@1|root,COG1190@2|Bacteria,4NDZN@976|Bacteroidetes,2FMXC@200643|Bacteroidia	976|Bacteroidetes	J	Belongs to the class-II aminoacyl-tRNA synthetase family	lysS	-	6.1.1.6	ko:K04567	ko00970,map00970	M00359,M00360	R03658	RC00055,RC00523	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	-	-	-	DUF4332,tRNA-synt_2,tRNA_anti-codon
BYD3_k127_1932703_13	1168034.FH5T_10875	6.826e-34	136.0	COG0703@1|root,COG0703@2|Bacteria,4NQ73@976|Bacteroidetes,2FM3K@200643|Bacteroidia	976|Bacteroidetes	F	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate	aroK	GO:0000287,GO:0003674,GO:0003824,GO:0004765,GO:0005488,GO:0006082,GO:0006520,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009987,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019438,GO:0019632,GO:0019752,GO:0032787,GO:0043167,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046872,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901615	2.7.1.71	ko:K00891	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	M00022	R02412	RC00002,RC00078	ko00000,ko00001,ko00002,ko01000	-	-	-	SKI
BYD3_k127_1932703_12	153721.MYP_3833	2.161e-37	143.0	COG0629@1|root,COG0629@2|Bacteria,4NT9M@976|Bacteroidetes,47XYD@768503|Cytophagia	976|Bacteroidetes	L	Domain of unknown function (DUF3127)	-	-	-	-	-	-	-	-	-	-	-	-	DUF3127
BYD3_k127_1932703_8	643867.Ftrac_2197	4.732e-72	276.0	COG1413@1|root,COG1413@2|Bacteria,4PKPI@976|Bacteroidetes,47NQS@768503|Cytophagia	976|Bacteroidetes	C	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein	-	-	-	-	-	-	-	-	-	-	-	-	cNMP_binding
BYD3_k127_1932703_10	313606.M23134_02457	5.818e-47	187.0	28KMN@1|root,2ZA61@2|Bacteria,4NJ9P@976|Bacteroidetes,47P0N@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	DUF4062
BYD3_k127_1932703_3	1237149.C900_05107	8.909e-254	816.0	COG2319@1|root,COG3064@1|root,COG2319@2|Bacteria,COG3064@2|Bacteria,4NEYQ@976|Bacteroidetes,47NKP@768503|Cytophagia	976|Bacteroidetes	M	WD40 repeats	-	-	-	-	-	-	-	-	-	-	-	-	WD40
BYD3_k127_1932703_9	1121373.KB903632_gene414	3.608e-48	186.0	2E0MA@1|root,32W6I@2|Bacteria,4NNWD@976|Bacteroidetes,47Q2K@768503|Cytophagia	976|Bacteroidetes	S	Outer membrane protein beta-barrel domain	-	-	-	-	-	-	-	-	-	-	-	-	OMP_b-brl_2
BYD3_k127_1932703_14	1121373.KB903632_gene413	2.889e-14	85.0	COG1520@1|root,COG1520@2|Bacteria,4NEVC@976|Bacteroidetes,47KRP@768503|Cytophagia	976|Bacteroidetes	S	Endonuclease Exonuclease Phosphatase	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_1932703_6	880073.Calab_0825	4.036e-91	323.0	COG1404@1|root,COG3637@1|root,COG1404@2|Bacteria,COG3637@2|Bacteria,2NPDC@2323|unclassified Bacteria	2|Bacteria	O	Peptidase S8	-	-	3.4.21.66	ko:K08651	-	-	-	-	ko00000,ko01000,ko01002,ko03110	-	-	-	DUF3138,Peptidase_S8
BYD3_k127_1957384_4	1227739.Hsw_2202	3.067e-65	242.0	COG2989@1|root,COG2989@2|Bacteria,4NI7M@976|Bacteroidetes,47X8Z@768503|Cytophagia	976|Bacteroidetes	S	L,D-transpeptidase catalytic domain	-	-	-	ko:K21470	-	-	-	-	ko00000,ko01002,ko01011	-	-	-	YkuD
BYD3_k127_1957384_5	1550091.JROE01000002_gene1014	1.002e-50	188.0	COG1376@1|root,COG1376@2|Bacteria,4NNX7@976|Bacteroidetes,1IT01@117747|Sphingobacteriia	976|Bacteroidetes	S	L,D-transpeptidase catalytic domain	-	-	-	-	-	-	-	-	-	-	-	-	YkuD_2
BYD3_k127_1957384_6	1279009.ADICEAN_00515	4.094e-49	194.0	COG1305@1|root,COG1305@2|Bacteria,4NEKT@976|Bacteroidetes,47NCY@768503|Cytophagia	976|Bacteroidetes	E	Domain of Unknown Function with PDB structure (DUF3857)	-	-	-	-	-	-	-	-	-	-	-	-	DUF3857,DUF3858,Transglut_core
BYD3_k127_1957384_8	926556.Echvi_0208	5.383e-36	145.0	COG3119@1|root,COG3119@2|Bacteria	2|Bacteria	P	arylsulfatase activity	-	-	-	-	-	-	-	-	-	-	-	-	Sulfatase
BYD3_k127_1957384_0	1168289.AJKI01000015_gene2180	1.426e-234	734.0	COG3303@1|root,COG3303@2|Bacteria,4NG0P@976|Bacteroidetes,2FP37@200643|Bacteroidia,3XKSC@558415|Marinilabiliaceae	976|Bacteroidetes	P	Cytochrome c552	nrfA	GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005623,GO:0006091,GO:0008150,GO:0008152,GO:0009061,GO:0009987,GO:0015980,GO:0016491,GO:0016661,GO:0016662,GO:0019645,GO:0020037,GO:0022900,GO:0022904,GO:0030288,GO:0030313,GO:0031975,GO:0042279,GO:0042597,GO:0044237,GO:0044464,GO:0045333,GO:0046906,GO:0048037,GO:0055114,GO:0097159,GO:0098809,GO:1901363	1.7.2.2	ko:K03385	ko00910,ko01120,ko05132,map00910,map01120,map05132	M00530	R05712	RC00176	ko00000,ko00001,ko00002,ko01000	-	-	-	Cytochrom_C552
BYD3_k127_1957384_3	869213.JCM21142_136	1.793e-80	272.0	COG3005@1|root,COG3005@2|Bacteria,4NK7R@976|Bacteroidetes,47M7M@768503|Cytophagia	976|Bacteroidetes	C	PFAM NapC NirT cytochrome c family, N-terminal region	nrfH	-	-	ko:K15876	ko00910,ko01120,map00910,map01120	M00530	R05712	RC00176	ko00000,ko00001,ko00002	-	-	-	Cytochrom_NNT
BYD3_k127_1957384_1	1349822.NSB1T_00420	9.066e-182	577.0	COG0151@1|root,COG0151@2|Bacteria,4NEUN@976|Bacteroidetes,2FN59@200643|Bacteroidia,22WGM@171551|Porphyromonadaceae	976|Bacteroidetes	F	Belongs to the GARS family	purD	-	6.3.4.13	ko:K01945	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	M00048	R04144	RC00090,RC00166	ko00000,ko00001,ko00002,ko01000	-	-	-	GARS_A,GARS_C,GARS_N
BYD3_k127_1957384_7	1121373.KB903625_gene3191	9.788e-49	186.0	COG3064@1|root,COG3064@2|Bacteria,4NM6Q@976|Bacteroidetes,47P6I@768503|Cytophagia	976|Bacteroidetes	M	Type IX secretion system membrane protein PorP/SprF	-	-	-	-	-	-	-	-	-	-	-	-	PorP_SprF
BYD3_k127_1957384_2	929556.Solca_2664	1.377e-106	385.0	COG2374@1|root,COG3209@1|root,COG3210@1|root,COG3391@1|root,COG4886@1|root,COG4932@1|root,COG5492@1|root,COG2374@2|Bacteria,COG3209@2|Bacteria,COG3210@2|Bacteria,COG3391@2|Bacteria,COG4886@2|Bacteria,COG4932@2|Bacteria,COG5492@2|Bacteria,4PKBQ@976|Bacteroidetes,1IQYI@117747|Sphingobacteriia	976|Bacteroidetes	M	SprB repeat	-	-	-	-	-	-	-	-	-	-	-	-	CHU_C,SdrD_B,SprB
BYD3_k127_1957384_9	1237149.C900_05803	3.019e-09	71.0	COG1520@1|root,COG3209@1|root,COG4733@1|root,COG1520@2|Bacteria,COG3209@2|Bacteria,COG4733@2|Bacteria,4NNUN@976|Bacteroidetes,47Q36@768503|Cytophagia	976|Bacteroidetes	G	Belongs to the glycosyl hydrolase 8 (cellulase D) family	-	-	-	-	-	-	-	-	-	-	-	-	SBBP
BYD3_k127_1980025_4	742727.HMPREF9447_03434	7.815e-06	54.0	COG5434@1|root,COG5434@2|Bacteria,4NID5@976|Bacteroidetes,2FMZR@200643|Bacteroidia,4AMUM@815|Bacteroidaceae	976|Bacteroidetes	M	Belongs to the glycosyl hydrolase 28 family	-	-	-	-	-	-	-	-	-	-	-	-	Glyco_hydro_28
BYD3_k127_1980025_2	1123234.AUKI01000016_gene3078	8.521e-125	406.0	COG0702@1|root,COG0702@2|Bacteria,4NH6G@976|Bacteroidetes,1HY8T@117743|Flavobacteriia	976|Bacteroidetes	GM	NmrA family transcriptional regulator	-	-	-	-	-	-	-	-	-	-	-	-	NAD_binding_10,NmrA
BYD3_k127_1980025_3	1288963.ADIS_0065	2.069e-44	164.0	COG1426@1|root,COG1426@2|Bacteria,4PM8V@976|Bacteroidetes	976|Bacteroidetes	K	Helix-turn-helix XRE-family like proteins	-	-	-	-	-	-	-	-	-	-	-	-	HTH_3
BYD3_k127_1980025_0	1288963.ADIS_0064	3.67e-247	768.0	COG3550@1|root,COG3550@2|Bacteria,4NFYY@976|Bacteroidetes,47MNZ@768503|Cytophagia	976|Bacteroidetes	S	Pfam:HipA_N	-	-	2.7.11.1	ko:K07154	-	-	-	-	ko00000,ko01000,ko01001,ko02048	-	-	-	Couple_hipA,HipA_C
BYD3_k127_1980025_1	632518.Calow_0325	5.181e-183	585.0	COG5512@1|root,COG5512@2|Bacteria,1TR27@1239|Firmicutes,247Z8@186801|Clostridia,42HVD@68295|Thermoanaerobacterales	186801|Clostridia	S	Protein of unknown function (DUF4038)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4038,DUF5060
BYD3_k127_1980440_4	56780.SYN_00716	3.875e-103	345.0	COG2816@1|root,COG2816@2|Bacteria,1QGCX@1224|Proteobacteria,42R10@68525|delta/epsilon subdivisions,2WN3Z@28221|Deltaproteobacteria,2MQIY@213462|Syntrophobacterales	28221|Deltaproteobacteria	L	NADH pyrophosphatase zinc ribbon domain	nudC	-	3.6.1.22	ko:K03426	ko00760,ko01100,ko04146,map00760,map01100,map04146	-	R00103,R03004,R11104	RC00002	ko00000,ko00001,ko01000	-	-	-	NUDIX,NUDIX-like,zf-NADH-PPase
BYD3_k127_1980440_2	234267.Acid_5969	1.44e-153	498.0	COG0076@1|root,COG0076@2|Bacteria,3Y365@57723|Acidobacteria	57723|Acidobacteria	E	Pyridoxal-dependent decarboxylase conserved domain	-	-	-	-	-	-	-	-	-	-	-	-	Pyridoxal_deC
BYD3_k127_1980440_6	1297742.A176_02282	1.674e-08	63.0	2ESNI@1|root,33K73@2|Bacteria,1Q2MV@1224|Proteobacteria,4388I@68525|delta/epsilon subdivisions,2X3I7@28221|Deltaproteobacteria,2YW7A@29|Myxococcales	28221|Deltaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	DUF2378
BYD3_k127_1980440_1	925409.KI911562_gene790	3.295e-278	872.0	COG2010@1|root,COG4993@1|root,COG2010@2|Bacteria,COG4993@2|Bacteria,4NFK0@976|Bacteroidetes,1IQUR@117747|Sphingobacteriia	976|Bacteroidetes	C	Pyrrolo-quinoline quinone	-	-	1.1.5.2	ko:K00117	ko00030,ko01100,ko01110,ko01130,map00030,map01100,map01110,map01130	-	R06620	RC00066	ko00000,ko00001,ko01000	-	-	-	Cytochrome_CBB3,PQQ,PQQ_2
BYD3_k127_1980440_5	411476.BACOVA_04627	7.845e-61	213.0	COG0317@1|root,COG4502@1|root,COG0317@2|Bacteria,COG4502@2|Bacteria,4NTF5@976|Bacteroidetes,2G3D0@200643|Bacteroidia,4AWDR@815|Bacteroidaceae	976|Bacteroidetes	KT	5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C)	-	-	-	-	-	-	-	-	-	-	-	-	NT5C
BYD3_k127_1980440_0	1189612.A33Q_0644	0.0	1218.0	COG1048@1|root,COG1048@2|Bacteria,4NDZT@976|Bacteroidetes,47NMT@768503|Cytophagia	976|Bacteroidetes	C	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate	acnA	-	4.2.1.3	ko:K01681	ko00020,ko00630,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01210,ko01230,map00020,map00630,map00720,map01100,map01110,map01120,map01130,map01200,map01210,map01230	M00009,M00010,M00012,M00173,M00740	R01324,R01325,R01900	RC00497,RC00498,RC00618	br01601,ko00000,ko00001,ko00002,ko01000	-	-	-	Aconitase,Aconitase_C
BYD3_k127_1980440_3	925409.KI911562_gene1594	8.185e-129	422.0	COG1472@1|root,COG1472@2|Bacteria,4NE90@976|Bacteroidetes,1IVNE@117747|Sphingobacteriia	976|Bacteroidetes	G	Glycosyl hydrolase family 3 C-terminal domain	-	-	3.2.1.21	ko:K05349	ko00460,ko00500,ko00940,ko01100,ko01110,map00460,map00500,map00940,map01100,map01110	-	R00026,R02558,R02887,R02985,R03527,R04949,R04998,R10035,R10039,R10040	RC00049,RC00059,RC00171,RC00262,RC00397,RC00451,RC00714,RC00746,RC01248	ko00000,ko00001,ko01000	-	GH3	-	F5_F8_type_C,Glyco_hydro_3,Glyco_hydro_3_C,fn3
BYD3_k127_1981745_8	869213.JCM21142_83239	2.439e-47	171.0	COG2133@1|root,COG2133@2|Bacteria,4NEZC@976|Bacteroidetes,47KSC@768503|Cytophagia	976|Bacteroidetes	G	PFAM Glucose Sorbosone dehydrogenase	-	-	-	ko:K21430	-	-	-	-	ko00000,ko01000	-	-	-	Cytochrome_CBB3,GSDH
BYD3_k127_1981745_3	1168289.AJKI01000001_gene3622	2.859e-123	419.0	COG1629@1|root,COG4771@2|Bacteria,4PM07@976|Bacteroidetes,2FYI1@200643|Bacteroidia	976|Bacteroidetes	P	TonB dependent receptor	-	-	-	ko:K02014	-	-	-	-	ko00000,ko02000	1.B.14	-	-	CarbopepD_reg_2,Plug,TonB_dep_Rec
BYD3_k127_1981745_0	1158294.JOMI01000009_gene1238	2.994e-249	781.0	COG3387@1|root,COG3387@2|Bacteria,4NEE6@976|Bacteroidetes,2FPZR@200643|Bacteroidia	976|Bacteroidetes	G	Glycosyl hydrolase, family 15	-	-	3.2.1.3	ko:K01178	ko00500,ko01100,map00500,map01100	-	R01790,R01791,R06199	-	ko00000,ko00001,ko01000	-	GH15	-	Glyco_hydro_15
BYD3_k127_1981745_7	1273538.G159_08330	5.761e-48	180.0	COG0702@1|root,COG0702@2|Bacteria,1V112@1239|Firmicutes,4HEVN@91061|Bacilli,26F8G@186818|Planococcaceae	91061|Bacilli	GM	Nucleoside-diphosphate-sugar epimerases	M1-688	-	-	-	-	-	-	-	-	-	-	-	Epimerase,HIM1,NAD_binding_10
BYD3_k127_1981745_9	290512.Paes_0204	9.524e-45	171.0	COG1262@1|root,COG1680@1|root,COG1262@2|Bacteria,COG1680@2|Bacteria	2|Bacteria	V	peptidase activity	-	-	-	ko:K20333	ko02024,map02024	-	-	-	ko00000,ko00001	-	-	-	FGE-sulfatase,Fib_succ_major,TIR_2
BYD3_k127_1981745_4	742817.HMPREF9449_02267	2.651e-86	304.0	COG0642@1|root,COG0784@1|root,COG0784@2|Bacteria,COG2205@2|Bacteria,4NFEF@976|Bacteroidetes,2FNF0@200643|Bacteroidia,22WR8@171551|Porphyromonadaceae	976|Bacteroidetes	T	His Kinase A (phosphoacceptor) domain	-	-	-	-	-	-	-	-	-	-	-	-	HATPase_c,HisKA,Hpt,Response_reg
BYD3_k127_1981745_10	742817.HMPREF9449_02267	2.42e-41	164.0	COG0642@1|root,COG0784@1|root,COG0784@2|Bacteria,COG2205@2|Bacteria,4NFEF@976|Bacteroidetes,2FNF0@200643|Bacteroidia,22WR8@171551|Porphyromonadaceae	976|Bacteroidetes	T	His Kinase A (phosphoacceptor) domain	-	-	-	-	-	-	-	-	-	-	-	-	HATPase_c,HisKA,Hpt,Response_reg
BYD3_k127_1981745_2	1123234.AUKI01000016_gene2924	4.788e-149	483.0	COG2204@1|root,COG2204@2|Bacteria,4NE89@976|Bacteroidetes,1HWWK@117743|Flavobacteriia	976|Bacteroidetes	T	COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains	zraR	-	-	ko:K07713	ko02020,map02020	M00499	-	-	ko00000,ko00001,ko00002,ko02022	-	-	-	HTH_8,Response_reg,Sigma54_activat
BYD3_k127_1981745_12	1453505.JASY01000004_gene1786	0.0001721	50.0	2E33P@1|root,32Y3T@2|Bacteria,4NUQK@976|Bacteroidetes,1I5HV@117743|Flavobacteriia,2NX23@237|Flavobacterium	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_1981745_6	1408433.JHXV01000006_gene2768	1.388e-77	270.0	COG3137@1|root,COG3137@2|Bacteria,4NGB2@976|Bacteroidetes,1HY5S@117743|Flavobacteriia,2PAT9@246874|Cryomorphaceae	976|Bacteroidetes	M	Protein of unknown function (DUF3078)	-	-	-	-	-	-	-	-	-	-	-	-	DUF3078
BYD3_k127_1981745_5	929556.Solca_3664	1.199e-82	281.0	COG1801@1|root,COG1801@2|Bacteria,4NQ30@976|Bacteroidetes,1J07Y@117747|Sphingobacteriia	976|Bacteroidetes	S	Protein of unknown function DUF72	-	-	-	-	-	-	-	-	-	-	-	-	DUF72
BYD3_k127_1981745_11	269798.CHU_1505	2.407e-10	64.0	COG0845@1|root,COG0845@2|Bacteria,4PM1U@976|Bacteroidetes,47WF5@768503|Cytophagia	976|Bacteroidetes	M	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_1981745_1	926562.Oweho_1274	7.514e-154	506.0	COG5009@1|root,COG5009@2|Bacteria,4NECJ@976|Bacteroidetes,1HXWX@117743|Flavobacteriia,2PAGV@246874|Cryomorphaceae	976|Bacteroidetes	M	PFAM Penicillin binding protein transpeptidase domain	-	-	2.4.1.129,3.4.16.4	ko:K05366	ko00550,ko01100,ko01501,map00550,map01100,map01501	-	-	-	ko00000,ko00001,ko01000,ko01003,ko01011	-	GT51	-	Transgly,Transpeptidase
BYD3_k127_1984841_0	1121904.ARBP01000002_gene7293	3.712e-223	716.0	COG0577@1|root,COG0577@2|Bacteria,4NDUK@976|Bacteroidetes,47JJN@768503|Cytophagia	976|Bacteroidetes	V	FtsX-like permease family	-	-	-	ko:K02004	-	M00258	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	FtsX,MacB_PCD
BYD3_k127_1984841_3	620914.JH621271_gene1723	1.03e-56	199.0	COG0251@1|root,COG0251@2|Bacteria,4NPT7@976|Bacteroidetes,1I2BQ@117743|Flavobacteriia	976|Bacteroidetes	J	Endoribonuclease L-PSP	-	-	-	-	-	-	-	-	-	-	-	-	Ribonuc_L-PSP
BYD3_k127_1984841_4	1403313.AXBR01000009_gene842	9.879e-56	203.0	COG0454@1|root,COG0456@2|Bacteria,1V37I@1239|Firmicutes,4HGJH@91061|Bacilli,1ZIKD@1386|Bacillus	91061|Bacilli	K	FR47-like protein	-	-	-	-	-	-	-	-	-	-	-	-	Acetyltransf_1
BYD3_k127_1984841_1	457424.BFAG_03551	7.951e-73	252.0	COG0546@1|root,COG1051@1|root,COG0546@2|Bacteria,COG1051@2|Bacteria,4NK6B@976|Bacteroidetes,2FPVU@200643|Bacteroidia,4APTD@815|Bacteroidaceae	976|Bacteroidetes	F	COG COG1051 ADP-ribose pyrophosphatase	-	-	-	-	-	-	-	-	-	-	-	-	HAD_2,NUDIX,Nudix_N
BYD3_k127_2013896_13	1168034.FH5T_08900	4.723e-20	91.0	COG0224@1|root,COG0224@2|Bacteria,4NECM@976|Bacteroidetes,2FP5N@200643|Bacteroidia	976|Bacteroidetes	C	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex	atpG	-	-	ko:K02115	ko00190,ko00195,ko01100,map00190,map00195,map01100	M00157	-	-	ko00000,ko00001,ko00002,ko00194	3.A.2.1	-	-	ATP-synt
BYD3_k127_2013896_0	1453500.AT05_03545	5.069e-262	814.0	COG0056@1|root,COG0056@2|Bacteria,4NFZW@976|Bacteroidetes,1HXGV@117743|Flavobacteriia	976|Bacteroidetes	C	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit	atpA	-	3.6.3.14	ko:K02111	ko00190,ko00195,ko01100,map00190,map00195,map01100	M00157	-	-	ko00000,ko00001,ko00002,ko00194,ko01000	3.A.2.1	-	-	ATP-synt_ab,ATP-synt_ab_C,ATP-synt_ab_N
BYD3_k127_2013896_7	1168034.FH5T_08910	2.358e-32	132.0	COG0712@1|root,COG0712@2|Bacteria,4NSNF@976|Bacteroidetes,2FQZ5@200643|Bacteroidia	976|Bacteroidetes	C	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation	atpH	-	-	ko:K02113	ko00190,ko00195,ko01100,map00190,map00195,map01100	M00157	-	-	ko00000,ko00001,ko00002,ko00194	3.A.2.1	-	-	OSCP
BYD3_k127_2013896_5	743722.Sph21_5234	6.321e-40	153.0	COG0711@1|root,COG0711@2|Bacteria,4NQKA@976|Bacteroidetes,1ISAN@117747|Sphingobacteriia	976|Bacteroidetes	C	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)	atpF	-	-	ko:K02109	ko00190,ko00195,ko01100,map00190,map00195,map01100	M00157	-	-	ko00000,ko00001,ko00002,ko00194	3.A.2.1	-	-	ATP-synt_B
BYD3_k127_2013896_9	1168034.FH5T_08920	8.835e-23	100.0	COG0636@1|root,COG0636@2|Bacteria,4NURW@976|Bacteroidetes,2FTSZ@200643|Bacteroidia	976|Bacteroidetes	C	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation	atpE	GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0008324,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015399,GO:0015405,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016462,GO:0016469,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0032991,GO:0033177,GO:0034220,GO:0034641,GO:0034654,GO:0042623,GO:0042625,GO:0042626,GO:0043492,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044464,GO:0044769,GO:0045259,GO:0045263,GO:0046034,GO:0046390,GO:0046483,GO:0046933,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0099131,GO:0099132,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600	-	ko:K02110	ko00190,ko00195,ko01100,map00190,map00195,map01100	M00157	-	-	ko00000,ko00001,ko00002,ko00194	3.A.2.1	-	-	ATP-synt_C
BYD3_k127_2013896_3	1168034.FH5T_08925	2.577e-118	392.0	COG0356@1|root,COG0356@2|Bacteria,4NEPK@976|Bacteroidetes,2FNAB@200643|Bacteroidia	976|Bacteroidetes	C	it plays a direct role in the translocation of protons across the membrane	atpB	-	-	ko:K02108	ko00190,ko00195,ko01100,map00190,map00195,map01100	M00157	-	-	ko00000,ko00001,ko00002,ko00194,ko03110	3.A.2.1	-	-	ATP-synt_A
BYD3_k127_2013896_15	216432.CA2559_03030	1.995e-11	68.0	2DHEX@1|root,2ZZHF@2|Bacteria,4PFIC@976|Bacteroidetes,1I6WF@117743|Flavobacteriia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	ATPase_gene1
BYD3_k127_2013896_8	886379.AEWI01000022_gene108	2.417e-31	127.0	COG1664@1|root,COG1664@2|Bacteria,4NUZA@976|Bacteroidetes,2FUPU@200643|Bacteroidia,3XK7D@558415|Marinilabiliaceae	976|Bacteroidetes	M	Polymer-forming cytoskeletal	-	-	-	-	-	-	-	-	-	-	-	-	Bactofilin
BYD3_k127_2013896_2	1168034.FH5T_08945	1.136e-152	488.0	COG0332@1|root,COG0332@2|Bacteria,4NEYH@976|Bacteroidetes,2FM5X@200643|Bacteroidia	976|Bacteroidetes	I	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids	fabH	GO:0003674,GO:0003824,GO:0006082,GO:0006629,GO:0006631,GO:0008150,GO:0008152,GO:0009987,GO:0016740,GO:0016746,GO:0016747,GO:0019752,GO:0032787,GO:0033818,GO:0043436,GO:0044237,GO:0044238,GO:0044255,GO:0044281,GO:0071704	2.3.1.180	ko:K00648	ko00061,ko01100,ko01212,map00061,map01100,map01212	M00082,M00083	R10707	RC00004,RC02729,RC02888	ko00000,ko00001,ko00002,ko01000,ko01004	-	-	-	ACP_syn_III,ACP_syn_III_C
BYD3_k127_2013896_4	525373.HMPREF0766_12288	3.759e-109	361.0	COG0416@1|root,COG0416@2|Bacteria,4NHEX@976|Bacteroidetes,1IPMW@117747|Sphingobacteriia	976|Bacteroidetes	I	Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA	plsX	-	2.3.1.15	ko:K03621	ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110	M00089	R00851,R09380	RC00004,RC00039,RC00041	ko00000,ko00001,ko00002,ko01000,ko01004	-	-	-	FA_synthesis
BYD3_k127_2013896_12	445970.ALIPUT_01341	1.3e-20	92.0	COG0333@1|root,COG0333@2|Bacteria,4NUXU@976|Bacteroidetes,2FUZD@200643|Bacteroidia,22UKC@171550|Rikenellaceae	976|Bacteroidetes	J	Ribosomal L32p protein family	rpmF	-	-	ko:K02911	ko03010,map03010	M00178	-	-	br01610,ko00000,ko00001,ko00002,ko03011,ko03029	-	-	-	Ribosomal_L32p
BYD3_k127_2013896_6	1211813.CAPH01000009_gene69	1.118e-38	149.0	COG1399@1|root,COG1399@2|Bacteria,4NMQT@976|Bacteroidetes,2FPCJ@200643|Bacteroidia	976|Bacteroidetes	S	Psort location Cytoplasmic, score 8.96	-	-	-	-	-	-	-	-	-	-	-	-	DUF177
BYD3_k127_2013896_14	313594.PI23P_08475	3.157e-15	80.0	COG0745@1|root,COG2207@1|root,COG0745@2|Bacteria,COG2207@2|Bacteria,4NM5G@976|Bacteroidetes,1I18C@117743|Flavobacteriia,3VX8I@52959|Polaribacter	976|Bacteroidetes	K	helix_turn_helix, arabinose operon control protein	-	-	-	-	-	-	-	-	-	-	-	-	HTH_18
BYD3_k127_2013896_10	1122931.AUAE01000017_gene4288	6.809e-22	103.0	COG3637@1|root,COG3637@2|Bacteria,4NV08@976|Bacteroidetes,2FYJ1@200643|Bacteroidia,230YU@171551|Porphyromonadaceae	976|Bacteroidetes	M	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety	-	-	-	-	-	-	-	-	-	-	-	-	OMP_b-brl
BYD3_k127_2013896_1	714943.Mucpa_4488	2.969e-253	788.0	COG0055@1|root,COG0055@2|Bacteria,4NF1Q@976|Bacteroidetes,1IPG7@117747|Sphingobacteriia	976|Bacteroidetes	C	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits	atpD	-	3.6.3.14	ko:K02112	ko00190,ko00195,ko01100,map00190,map00195,map01100	M00157	-	-	ko00000,ko00001,ko00002,ko00194,ko01000	3.A.2.1	-	-	ATP-synt_ab,ATP-synt_ab_N
BYD3_k127_2013896_11	1168034.FH5T_06905	8.39e-21	93.0	COG0355@1|root,COG0355@2|Bacteria,4NUYG@976|Bacteroidetes,2FUIM@200643|Bacteroidia	976|Bacteroidetes	C	ATP synthase, delta epsilon subunit, beta-sandwich domain protein	atpC	-	-	ko:K02114	ko00190,ko00195,ko01100,map00190,map00195,map01100	M00157	-	-	ko00000,ko00001,ko00002,ko00194	3.A.2.1	-	-	ATP-synt_DE_N
BYD3_k127_2014667_9	1168034.FH5T_17590	9.943e-94	323.0	COG0265@1|root,COG2234@1|root,COG0265@2|Bacteria,COG2234@2|Bacteria,4NFZR@976|Bacteroidetes,2G2QE@200643|Bacteroidia	976|Bacteroidetes	O	Psort location Extracellular, score	-	-	-	-	-	-	-	-	-	-	-	-	PD40,PDZ_2,Peptidase_M28
BYD3_k127_2014667_16	385682.AFSL01000082_gene1165	1.651e-27	117.0	2FDYT@1|root,345Z4@2|Bacteria,4P5XT@976|Bacteroidetes,2FYXH@200643|Bacteroidia,3XKAA@558415|Marinilabiliaceae	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_2014667_3	742767.HMPREF9456_00988	7.835e-198	626.0	COG0527@1|root,COG0527@2|Bacteria,4NHWC@976|Bacteroidetes,2FQZS@200643|Bacteroidia,22ZC1@171551|Porphyromonadaceae	976|Bacteroidetes	E	Amino acid kinase family	-	-	2.7.2.4	ko:K00928	ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01210,map01230	M00016,M00017,M00018,M00033,M00525,M00526,M00527	R00480	RC00002,RC00043	ko00000,ko00001,ko00002,ko01000	-	-	-	AA_kinase
BYD3_k127_2014667_2	945713.IALB_2697	3.284e-271	857.0	COG0204@1|root,COG1022@1|root,COG0204@2|Bacteria,COG1022@2|Bacteria	2|Bacteria	I	Amp-dependent synthetase and ligase	fadD	-	2.3.1.51,6.2.1.3	ko:K00655,ko:K01897	ko00061,ko00071,ko00561,ko00564,ko01100,ko01110,ko01212,ko02024,ko03320,ko04146,ko04216,ko04714,ko04920,map00061,map00071,map00561,map00564,map01100,map01110,map01212,map02024,map03320,map04146,map04216,map04714,map04920	M00086,M00089	R01280,R02241,R09381	RC00004,RC00014,RC00037,RC00039	ko00000,ko00001,ko00002,ko01000,ko01004,ko04147	4.C.1.1	-	-	AMP-binding,AMP-binding_C,Acyltransferase,PP-binding
BYD3_k127_2014667_20	1121904.ARBP01000009_gene4232	5.662e-15	77.0	2EQZ1@1|root,33IIQ@2|Bacteria,4NXHA@976|Bacteroidetes,47T71@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_2014667_17	1408473.JHXO01000004_gene136	5.509e-27	119.0	COG3637@1|root,COG3637@2|Bacteria,4NQBX@976|Bacteroidetes,2G3BC@200643|Bacteroidia	976|Bacteroidetes	M	Outer membrane protein beta-barrel domain	-	-	-	-	-	-	-	-	-	-	-	-	OMP_b-brl_2
BYD3_k127_2014667_5	1185876.BN8_06261	2.212e-143	466.0	COG0527@1|root,COG0527@2|Bacteria,4NF0M@976|Bacteroidetes,47JAD@768503|Cytophagia	976|Bacteroidetes	E	Belongs to the aspartokinase family	lysC	-	2.7.2.4	ko:K00928	ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01210,map01230	M00016,M00017,M00018,M00033,M00525,M00526,M00527	R00480	RC00002,RC00043	ko00000,ko00001,ko00002,ko01000	-	-	-	AA_kinase
BYD3_k127_2014667_1	1121098.HMPREF1534_00387	0.0	1199.0	COG1197@1|root,COG1197@2|Bacteria,4NEPA@976|Bacteroidetes,2FP1Q@200643|Bacteroidia,4AMR1@815|Bacteroidaceae	976|Bacteroidetes	L	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site	mfd	-	-	ko:K03723	ko03420,map03420	-	-	-	ko00000,ko00001,ko01000,ko03400	-	-	-	CarD_CdnL_TRCF,DEAD,Helicase_C,TRCF
BYD3_k127_2014667_4	471854.Dfer_4732	3.127e-160	519.0	COG0306@1|root,COG0306@2|Bacteria,4NE7J@976|Bacteroidetes,47KEG@768503|Cytophagia	976|Bacteroidetes	P	phosphate transporter	-	-	-	ko:K03306	-	-	-	-	ko00000	2.A.20	-	-	PHO4
BYD3_k127_2014667_6	435591.BDI_3329	1.199e-110	372.0	COG1538@1|root,COG1538@2|Bacteria,4NEMI@976|Bacteroidetes,2FMRJ@200643|Bacteroidia,22W2E@171551|Porphyromonadaceae	976|Bacteroidetes	MU	Outer membrane efflux protein	tolC	-	-	-	-	-	-	-	-	-	-	-	OEP
BYD3_k127_2014667_0	471870.BACINT_04626	0.0	1323.0	COG0841@1|root,COG0841@2|Bacteria,4NDZG@976|Bacteroidetes,2FM3B@200643|Bacteroidia,4AMAT@815|Bacteroidaceae	976|Bacteroidetes	V	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family	bepE_4	-	-	ko:K03296,ko:K18138	ko01501,ko01503,map01501,map01503	M00647,M00699,M00718	-	-	ko00000,ko00001,ko00002,ko01504,ko02000	2.A.6.2	-	-	ACR_tran
BYD3_k127_2014667_7	1211813.CAPH01000003_gene1291	6.196e-109	363.0	COG0845@1|root,COG0845@2|Bacteria,4NERP@976|Bacteroidetes,2FMFG@200643|Bacteroidia,22UE3@171550|Rikenellaceae	976|Bacteroidetes	M	Biotin-lipoyl like	-	-	-	ko:K03585	ko01501,ko01503,map01501,map01503	M00646,M00647,M00699,M00718	-	-	ko00000,ko00001,ko00002,ko01504,ko02000,ko03036	2.A.6.2,8.A.1.6	-	-	HlyD_D23
BYD3_k127_2014667_19	1168034.FH5T_14775	5.351e-20	94.0	2EFWM@1|root,339NX@2|Bacteria	2|Bacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_2014667_18	1122605.KB893637_gene3098	4.041e-26	115.0	2BKB1@1|root,32ERD@2|Bacteria,4NQKR@976|Bacteroidetes,1ITA9@117747|Sphingobacteriia	976|Bacteroidetes	S	Outer membrane protein beta-barrel domain	-	-	-	-	-	-	-	-	-	-	-	-	OMP_b-brl_2
BYD3_k127_2014667_12	700598.Niako_0121	6.715e-64	226.0	COG3637@1|root,COG3637@2|Bacteria,4NWBY@976|Bacteroidetes,1J0D4@117747|Sphingobacteriia	976|Bacteroidetes	M	Outer membrane protein beta-barrel domain	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_2014667_11	927658.AJUM01000037_gene2447	5.237e-78	267.0	COG2885@1|root,COG2885@2|Bacteria,4NEGF@976|Bacteroidetes,2FNU2@200643|Bacteroidia	976|Bacteroidetes	M	Belongs to the ompA family	yiaD	-	-	-	-	-	-	-	-	-	-	-	Gly-zipper_Omp,OmpA
BYD3_k127_2014667_15	1121904.ARBP01000006_gene3867	7.624e-41	158.0	COG1595@1|root,COG1595@2|Bacteria,4NT79@976|Bacteroidetes	976|Bacteroidetes	K	RNA polymerase, sigma factor	-	-	-	ko:K03088	-	-	-	-	ko00000,ko03021	-	-	-	Sigma70_r2,Sigma70_r4_2
BYD3_k127_2014667_13	153721.MYP_3831	1.882e-57	207.0	COG0545@1|root,COG0545@2|Bacteria,4NDW4@976|Bacteroidetes,47K8M@768503|Cytophagia	976|Bacteroidetes	O	Domain amino terminal to FKBP-type peptidyl-prolyl isomerase	fklB	-	5.2.1.8	ko:K03772,ko:K03773	-	-	-	-	ko00000,ko01000,ko03110	-	-	-	FKBP_C,FKBP_N
BYD3_k127_2014667_8	1168034.FH5T_11865	6.491e-97	325.0	COG0204@1|root,COG0204@2|Bacteria,4NF25@976|Bacteroidetes,2FNJQ@200643|Bacteroidia	976|Bacteroidetes	I	Acyl-transferase	-	-	-	-	-	-	-	-	-	-	-	-	Acyltransferase
BYD3_k127_2014667_14	927658.AJUM01000040_gene919	5.124e-43	162.0	COG2001@1|root,COG2001@2|Bacteria,4NM4X@976|Bacteroidetes,2FUA3@200643|Bacteroidia,3XK4Z@558415|Marinilabiliaceae	976|Bacteroidetes	K	MraZ protein, putative antitoxin-like	mraZ	GO:0000976,GO:0001067,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0006355,GO:0008150,GO:0009889,GO:0009890,GO:0009892,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0019219,GO:0019222,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031333,GO:0043254,GO:0043565,GO:0044087,GO:0044212,GO:0045892,GO:0045934,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051128,GO:0051129,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:0140110,GO:1901363,GO:1902679,GO:1903506,GO:1903507,GO:1990837,GO:2000112,GO:2000113,GO:2000142,GO:2000143,GO:2001141	-	ko:K03925	-	-	-	-	ko00000	-	-	-	MraZ
BYD3_k127_2014667_10	862515.HMPREF0658_1843	6.663e-87	293.0	COG0275@1|root,COG0275@2|Bacteria,4NFQB@976|Bacteroidetes,2FMPT@200643|Bacteroidia	976|Bacteroidetes	J	Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA	rsmH	GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016434,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0070475,GO:0071424,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360	2.1.1.199	ko:K03438	-	-	-	-	ko00000,ko01000,ko03009	-	-	-	Methyltransf_5
BYD3_k127_2019825_2	869213.JCM21142_93697	1.75e-21	94.0	COG3875@1|root,COG3875@2|Bacteria,4NI4Z@976|Bacteroidetes	976|Bacteroidetes	S	Domain of unknown function (DUF2088)	-	-	-	-	-	-	-	-	-	-	-	-	DUF2088
BYD3_k127_2019825_1	1109445.AGSX01000013_gene2013	8.483e-45	166.0	COG3169@1|root,COG3169@2|Bacteria,1RHBQ@1224|Proteobacteria,1S7UR@1236|Gammaproteobacteria,1Z2ZI@136846|Pseudomonas stutzeri group	1236|Gammaproteobacteria	S	protein conserved in bacteria	-	-	-	ko:K09922	-	-	-	-	ko00000	-	-	-	DMT_6
BYD3_k127_2019825_4	743722.Sph21_3119	3.232e-11	72.0	COG3637@1|root,COG3637@2|Bacteria,4NV8Z@976|Bacteroidetes,1IUHA@117747|Sphingobacteriia	976|Bacteroidetes	M	Outer membrane protein beta-barrel domain	-	-	-	-	-	-	-	-	-	-	-	-	OMP_b-brl
BYD3_k127_2019825_0	485918.Cpin_1962	2.463e-147	476.0	COG0460@1|root,COG0460@2|Bacteria,4NHRC@976|Bacteroidetes,1IPM4@117747|Sphingobacteriia	976|Bacteroidetes	E	homoserine dehydrogenase	hom	-	1.1.1.3	ko:K00003	ko00260,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00260,map00270,map00300,map01100,map01110,map01120,map01130,map01230	M00017,M00018	R01773,R01775	RC00087	ko00000,ko00001,ko00002,ko01000	-	-	-	Homoserine_dh,NAD_binding_3
BYD3_k127_2041230_16	869213.JCM21142_52201	5.914e-52	188.0	COG0793@1|root,COG0793@2|Bacteria,4NDWU@976|Bacteroidetes,47JTG@768503|Cytophagia	976|Bacteroidetes	M	Belongs to the peptidase S41A family	prc	-	3.4.21.102	ko:K03797	-	-	-	-	ko00000,ko01000,ko01002	-	-	-	PDZ,PDZ_2,Peptidase_S41
BYD3_k127_2041230_8	927658.AJUM01000037_gene1909	3.48e-106	349.0	COG1587@1|root,COG1587@2|Bacteria,4NEQ3@976|Bacteroidetes,2FMX9@200643|Bacteroidia,3XIXK@558415|Marinilabiliaceae	976|Bacteroidetes	H	Uroporphyrinogen-III synthase HemD	hemD	-	4.2.1.75	ko:K01719	ko00860,ko01100,ko01110,ko01120,map00860,map01100,map01110,map01120	M00121	R03165	RC01861	ko00000,ko00001,ko00002,ko01000	-	-	-	HEM4
BYD3_k127_2041230_21	743722.Sph21_1381	3.372e-42	157.0	COG1694@1|root,COG1694@2|Bacteria,4NQ3H@976|Bacteroidetes,1ISAQ@117747|Sphingobacteriia	976|Bacteroidetes	S	MazG nucleotide pyrophosphohydrolase	ypjD	-	-	-	-	-	-	-	-	-	-	-	MazG
BYD3_k127_2041230_15	1408473.JHXO01000001_gene2082	4.144e-62	216.0	COG1490@1|root,COG1490@2|Bacteria,4NNFF@976|Bacteroidetes,2FNMW@200643|Bacteroidia	976|Bacteroidetes	J	rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality	dtd	GO:0002161,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006399,GO:0006450,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016070,GO:0016787,GO:0016788,GO:0034641,GO:0034660,GO:0043170,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0051499,GO:0051500,GO:0052689,GO:0065007,GO:0065008,GO:0071704,GO:0090304,GO:0106074,GO:0140098,GO:0140101,GO:1901360	-	ko:K07560	-	-	-	-	ko00000,ko01000,ko03016	-	-	-	Tyr_Deacylase
BYD3_k127_2041230_17	869213.JCM21142_41477	1.358e-51	189.0	COG1983@1|root,COG1983@2|Bacteria,4NG3T@976|Bacteroidetes,47M43@768503|Cytophagia	976|Bacteroidetes	KT	PFAM PspC domain	-	-	-	ko:K03973	-	-	-	-	ko00000,ko02048,ko03000	-	-	-	DUF2807,PspC
BYD3_k127_2041230_19	927658.AJUM01000034_gene538	6.349e-45	165.0	COG1695@1|root,COG1695@2|Bacteria,4NSI4@976|Bacteroidetes,2FTF6@200643|Bacteroidia,3XK3G@558415|Marinilabiliaceae	976|Bacteroidetes	K	Transcriptional regulator PadR-like family	-	-	-	ko:K10947	-	-	-	-	ko00000,ko03000	-	-	-	PadR
BYD3_k127_2041230_14	1168034.FH5T_08455	5.492e-65	242.0	COG1983@1|root,COG1983@2|Bacteria,4NG3T@976|Bacteroidetes,2FPZX@200643|Bacteroidia	976|Bacteroidetes	KT	PspC domain protein	-	-	-	ko:K03973	-	-	-	-	ko00000,ko02048,ko03000	-	-	-	DUF2807,PspC
BYD3_k127_2041230_22	1185876.BN8_03619	5.048e-40	153.0	COG1765@1|root,COG1765@2|Bacteria,4P49G@976|Bacteroidetes,47VJ5@768503|Cytophagia	976|Bacteroidetes	O	OsmC-like protein	-	-	-	-	-	-	-	-	-	-	-	-	OsmC
BYD3_k127_2041230_10	886379.AEWI01000012_gene1079	6.202e-95	321.0	COG0524@1|root,COG0524@2|Bacteria,4NIHI@976|Bacteroidetes,2FPRJ@200643|Bacteroidia,3XIRP@558415|Marinilabiliaceae	976|Bacteroidetes	G	pfkB family carbohydrate kinase	-	-	-	-	-	-	-	-	-	-	-	-	PfkB
BYD3_k127_2041230_9	1168034.FH5T_03570	6.752e-99	325.0	COG1428@1|root,COG1428@2|Bacteria,4NFA8@976|Bacteroidetes,2FSWC@200643|Bacteroidia	976|Bacteroidetes	F	Deoxynucleoside kinase	dck	-	-	-	-	-	-	-	-	-	-	-	dNK
BYD3_k127_2041230_2	1408473.JHXO01000010_gene3719	8.143e-217	683.0	COG0318@1|root,COG0318@2|Bacteria,4PKJY@976|Bacteroidetes,2G0EN@200643|Bacteroidia	976|Bacteroidetes	IQ	GH3 auxin-responsive promoter	-	-	-	-	-	-	-	-	-	-	-	-	GH3
BYD3_k127_2041230_12	1168034.FH5T_16450	2.2e-78	272.0	COG0697@1|root,COG0697@2|Bacteria	2|Bacteria	EG	spore germination	yhbE	GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944	-	-	-	-	-	-	-	-	-	-	EamA
BYD3_k127_2041230_3	385682.AFSL01000040_gene202	4.636e-213	671.0	COG0493@1|root,COG0493@2|Bacteria,4NG9R@976|Bacteroidetes,2FN6R@200643|Bacteroidia,3XJBN@558415|Marinilabiliaceae	976|Bacteroidetes	E	Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster	gltD	-	1.4.1.13,1.4.1.14	ko:K00266	ko00250,ko00910,ko01100,ko01110,ko01120,ko01130,ko01230,map00250,map00910,map01100,map01110,map01120,map01130,map01230	-	R00093,R00114,R00248	RC00006,RC00010,RC02799	ko00000,ko00001,ko01000	-	-	-	Fer4_20,Pyr_redox_2
BYD3_k127_2041230_0	927658.AJUM01000034_gene102	0.0	2139.0	COG0067@1|root,COG0069@1|root,COG0067@2|Bacteria,COG0069@2|Bacteria,4NFKH@976|Bacteroidetes,2FNH9@200643|Bacteroidia,3XJ8U@558415|Marinilabiliaceae	976|Bacteroidetes	E	GXGXG motif	gltB	-	1.4.1.13,1.4.1.14,1.4.7.1	ko:K00265,ko:K00284	ko00250,ko00630,ko00910,ko01100,ko01110,ko01120,ko01130,ko01230,map00250,map00630,map00910,map01100,map01110,map01120,map01130,map01230	-	R00021,R00093,R00114,R00248,R10086	RC00006,RC00010,RC02799	ko00000,ko00001,ko01000	-	-	-	GATase_2,GXGXG,Glu_syn_central,Glu_synthase
BYD3_k127_2041230_5	385682.AFSL01000040_gene192	4.875e-194	614.0	COG0372@1|root,COG0372@2|Bacteria,4NFXK@976|Bacteroidetes,2FPF3@200643|Bacteroidia,3XJB7@558415|Marinilabiliaceae	976|Bacteroidetes	C	Citrate synthase, C-terminal domain	prpC	-	2.3.3.1,2.3.3.5	ko:K01647,ko:K01659	ko00020,ko00630,ko00640,ko01100,ko01110,ko01120,ko01130,ko01200,ko01210,ko01230,map00020,map00630,map00640,map01100,map01110,map01120,map01130,map01200,map01210,map01230	M00009,M00010,M00012,M00740	R00351,R00931	RC00004,RC00067,RC00406,RC02827	br01601,ko00000,ko00001,ko00002,ko01000	-	-	-	Citrate_synt
BYD3_k127_2041230_7	935948.KE386495_gene2152	1.285e-138	452.0	COG0014@1|root,COG0014@2|Bacteria,1TQ9V@1239|Firmicutes,248NX@186801|Clostridia,42FGQ@68295|Thermoanaerobacterales	186801|Clostridia	E	Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate	proA	-	1.2.1.41	ko:K00147	ko00330,ko00332,ko01100,ko01110,ko01130,ko01230,map00330,map00332,map01100,map01110,map01130,map01230	M00015	R03313	RC00684	ko00000,ko00001,ko00002,ko01000	-	-	-	Aldedh
BYD3_k127_2041230_11	1128398.Curi_c11860	2.49e-92	310.0	COG0263@1|root,COG0263@2|Bacteria,1TPG6@1239|Firmicutes,2486P@186801|Clostridia,268GC@186813|unclassified Clostridiales	186801|Clostridia	E	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate	proB	-	2.7.2.11	ko:K00931	ko00330,ko00332,ko01100,ko01130,ko01230,map00330,map00332,map01100,map01130,map01230	M00015	R00239	RC00002,RC00043	ko00000,ko00001,ko00002,ko01000	-	-	-	AA_kinase,PUA
BYD3_k127_2041230_18	642492.Clole_2383	2.823e-45	172.0	COG0263@1|root,COG0263@2|Bacteria,1TPG6@1239|Firmicutes,2486P@186801|Clostridia	186801|Clostridia	E	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate	proB	-	2.7.2.11	ko:K00931	ko00330,ko00332,ko01100,ko01130,ko01230,map00330,map00332,map01100,map01130,map01230	M00015	R00239	RC00002,RC00043	ko00000,ko00001,ko00002,ko01000	-	-	-	AA_kinase,PUA
BYD3_k127_2041230_6	470145.BACCOP_02694	3.113e-190	603.0	COG0165@1|root,COG0165@2|Bacteria,4NFCY@976|Bacteroidetes,2FPNB@200643|Bacteroidia,4ANCW@815|Bacteroidaceae	976|Bacteroidetes	E	Psort location Cytoplasmic, score	argH	GO:0003674,GO:0003824,GO:0004056,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006591,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016829,GO:0016840,GO:0016842,GO:0019752,GO:0042450,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607	4.3.2.1	ko:K01755	ko00220,ko00250,ko01100,ko01110,ko01130,ko01230,map00220,map00250,map01100,map01110,map01130,map01230	M00029,M00844,M00845	R01086	RC00445,RC00447	ko00000,ko00001,ko00002,ko01000,ko04147	-	-	-	Lyase_1
BYD3_k127_2041230_4	1499967.BAYZ01000029_gene1212	2.814e-199	627.0	COG0137@1|root,COG0137@2|Bacteria,2NP01@2323|unclassified Bacteria	2|Bacteria	E	Arginosuccinate synthase	argG	GO:0000050,GO:0000053,GO:0003674,GO:0003824,GO:0004055,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006575,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016874,GO:0016879,GO:0019627,GO:0019752,GO:0034641,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:0071941,GO:0072350,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607	6.3.4.5	ko:K01940	ko00220,ko00250,ko01100,ko01110,ko01130,ko01230,ko05418,map00220,map00250,map01100,map01110,map01130,map01230,map05418	M00029,M00844,M00845	R01954	RC00380,RC00629	ko00000,ko00001,ko00002,ko01000,ko04147	-	-	iJN678.argG,iSB619.SA_RS04675	Arginosuc_synth
BYD3_k127_2041230_20	1408473.JHXO01000006_gene1223	9.152e-45	167.0	COG1438@1|root,COG1438@2|Bacteria,4NSSS@976|Bacteroidetes,2FR3Q@200643|Bacteroidia	976|Bacteroidetes	K	Regulates arginine biosynthesis genes	argR	-	-	ko:K03402	-	-	-	-	ko00000,ko03000	-	-	-	Arg_repressor,Arg_repressor_C
BYD3_k127_2041230_1	1168289.AJKI01000011_gene597	0.0	1661.0	COG0458@1|root,COG0458@2|Bacteria,4NEQ0@976|Bacteroidetes,2FMKD@200643|Bacteroidia,3XIQ0@558415|Marinilabiliaceae	976|Bacteroidetes	EF	Carbamoyl-phosphate synthetase large chain, oligomerisation domain	carB	-	6.3.5.5	ko:K01955	ko00240,ko00250,ko01100,map00240,map00250,map01100	M00051	R00256,R00575,R01395,R10948,R10949	RC00002,RC00010,RC00043,RC02750,RC02798,RC03314	ko00000,ko00001,ko00002,ko01000	-	-	-	CPSase_L_D2,CPSase_L_D3,MGS
BYD3_k127_2041230_13	1280390.CBQR020000102_gene2565	2.636e-73	252.0	COG1051@1|root,COG1051@2|Bacteria,1U7WX@1239|Firmicutes,4HHQT@91061|Bacilli,26RN6@186822|Paenibacillaceae	91061|Bacilli	F	AdP-ribose pyrophosphatase	yjhB	-	3.6.1.13	ko:K01515	ko00230,map00230	-	R01054	RC00002	ko00000,ko00001,ko01000	-	-	-	NUDIX,Nudix_N
BYD3_k127_2041230_23	1122991.BAIZ01000013_gene1201	2.92e-27	117.0	COG1381@1|root,COG1381@2|Bacteria,4NIBQ@976|Bacteroidetes,2FPGE@200643|Bacteroidia	976|Bacteroidetes	L	Involved in DNA repair and RecF pathway recombination	recO	-	-	ko:K03584	ko03440,map03440	-	-	-	ko00000,ko00001,ko03400	-	-	-	RecO_C,RecO_N
BYD3_k127_2063324_0	1047013.AQSP01000105_gene1439	2.604e-153	494.0	COG0531@1|root,COG0531@2|Bacteria	2|Bacteria	E	amino acid	MA20_31530	-	-	ko:K03294	-	-	-	-	ko00000	2.A.3.2	-	-	AA_permease_2
BYD3_k127_2063324_4	1121875.KB907549_gene2073	4.442e-76	260.0	COG4122@1|root,COG4122@2|Bacteria,4NM4M@976|Bacteroidetes,1I5WV@117743|Flavobacteriia	976|Bacteroidetes	S	O-methyltransferase	-	-	-	-	-	-	-	-	-	-	-	-	Methyltransf_3
BYD3_k127_2063324_3	869213.JCM21142_93472	1.941e-82	280.0	COG5012@1|root,COG5012@2|Bacteria,4P0JY@976|Bacteroidetes	976|Bacteroidetes	S	B12 binding domain	-	-	-	-	-	-	-	-	-	-	-	-	B12-binding,B12-binding_2
BYD3_k127_2063324_1	1121904.ARBP01000021_gene3618	1.713e-98	328.0	COG0684@1|root,COG0684@2|Bacteria,4NF3M@976|Bacteroidetes,47W9V@768503|Cytophagia	976|Bacteroidetes	H	Pfam:Methyltransf_6	-	-	-	-	-	-	-	-	-	-	-	-	RraA-like
BYD3_k127_2063324_2	1168034.FH5T_14690	2.065e-98	342.0	COG0577@1|root,COG0577@2|Bacteria,4NDUK@976|Bacteroidetes	976|Bacteroidetes	V	permease	-	-	-	ko:K02004	-	M00258	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	FtsX,MacB_PCD
BYD3_k127_2069574_0	471870.BACINT_04556	8.007e-185	587.0	COG1541@1|root,COG1541@2|Bacteria,4NGRR@976|Bacteroidetes,2FQ3U@200643|Bacteroidia,4ANVE@815|Bacteroidaceae	976|Bacteroidetes	H	AMP-binding enzyme	paaK	-	6.2.1.30	ko:K01912	ko00360,ko01120,ko05111,map00360,map01120,map05111	-	R02539	RC00004,RC00014	ko00000,ko00001,ko01000	-	-	-	AMP-binding,AMP-binding_C_2
BYD3_k127_2069574_1	485918.Cpin_1875	1.845e-164	534.0	COG3049@1|root,COG3049@2|Bacteria,4PKMY@976|Bacteroidetes,1J0M9@117747|Sphingobacteriia	976|Bacteroidetes	M	Acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase	-	-	-	-	-	-	-	-	-	-	-	-	AAT
BYD3_k127_2069574_2	153721.MYP_4273	1.066e-139	459.0	COG1233@1|root,COG1233@2|Bacteria,4NG5Y@976|Bacteroidetes,47K5X@768503|Cytophagia	976|Bacteroidetes	Q	Flavin containing amine oxidoreductase	-	-	1.3.99.23	ko:K09516	ko00830,map00830	-	R07163	RC01835	ko00000,ko00001,ko01000	-	-	-	Amino_oxidase,NAD_binding_8
BYD3_k127_2082008_3	391603.FBALC1_02687	1.032e-34	137.0	COG4888@1|root,COG4888@2|Bacteria,4NEE8@976|Bacteroidetes,1HX4C@117743|Flavobacteriia	976|Bacteroidetes	S	PFAM ASPIC and UnbV	-	-	-	-	-	-	-	-	-	-	-	-	FG-GAP,UnbV_ASPIC,VCBS
BYD3_k127_2082008_1	143224.JQMD01000002_gene369	3.153e-148	486.0	COG0702@1|root,COG0702@2|Bacteria,4PKHQ@976|Bacteroidetes,1IJ9C@117743|Flavobacteriia	976|Bacteroidetes	GM	SusD family	-	-	-	ko:K21572	-	-	-	-	ko00000,ko02000	8.A.46.1,8.A.46.3	-	-	SusD-like_3,SusD_RagB
BYD3_k127_2082008_0	1392489.JPOL01000002_gene696	0.0	1128.0	COG4206@1|root,COG4206@2|Bacteria,4P258@976|Bacteroidetes,1IJ92@117743|Flavobacteriia	976|Bacteroidetes	H	Outer membrane receptor	-	-	-	-	-	-	-	-	-	-	-	-	CarbopepD_reg_2,Plug,TonB_dep_Rec
BYD3_k127_2082008_2	742766.HMPREF9455_00271	2.007e-46	182.0	COG3712@1|root,COG3712@2|Bacteria,4NNTM@976|Bacteroidetes,2FQW4@200643|Bacteroidia,22Y0G@171551|Porphyromonadaceae	976|Bacteroidetes	PT	Domain of unknown function (DUF4974)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4974,FecR
BYD3_k127_2082008_4	411901.BACCAC_01363	3.573e-28	121.0	COG1595@1|root,COG1595@2|Bacteria,4NRYG@976|Bacteroidetes,2FSMX@200643|Bacteroidia,4ARX9@815|Bacteroidaceae	976|Bacteroidetes	K	RNA polymerase sigma-70 factor, ECF subfamily	-	-	-	ko:K03088	-	-	-	-	ko00000,ko03021	-	-	-	Sigma70_r2,Sigma70_r4_2
BYD3_k127_2082008_5	1304874.JAFY01000002_gene968	5.639e-21	94.0	COG0864@1|root,COG0864@2|Bacteria,3TCI4@508458|Synergistetes	508458|Synergistetes	K	Transcriptional regulator	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_2082008_6	886379.AEWI01000010_gene616	3.698e-15	77.0	COG0502@1|root,COG0502@2|Bacteria,4NEI7@976|Bacteroidetes,2FM8N@200643|Bacteroidia,3XIP7@558415|Marinilabiliaceae	976|Bacteroidetes	H	Biotin and Thiamin Synthesis associated domain	hydG	-	4.1.99.19	ko:K03150	ko00730,ko01100,map00730,map01100	-	R10246	RC01434,RC03095	ko00000,ko00001,ko01000	-	-	-	BATS,Radical_SAM
BYD3_k127_2123511_4	517418.Ctha_1807	1.986e-47	176.0	COG1864@1|root,COG1864@2|Bacteria,1FFIK@1090|Chlorobi	1090|Chlorobi	F	DNA/RNA non-specific endonuclease	-	-	-	ko:K01173	ko04210,map04210	-	-	-	ko00000,ko00001,ko03029	-	-	-	Endonuclease_NS
BYD3_k127_2123511_8	1289135.A966_02213	9.198e-16	85.0	COG0840@1|root,COG0840@2|Bacteria,2J5BF@203691|Spirochaetes	203691|Spirochaetes	NT	methyl-accepting chemotaxis protein	mcp2	-	-	ko:K03406	ko02020,ko02030,map02020,map02030	-	-	-	ko00000,ko00001,ko02035	-	-	-	HAMP,MCPsignal,dCache_1
BYD3_k127_2123511_2	762903.Pedsa_2429	4.549e-146	467.0	COG0074@1|root,COG0074@2|Bacteria,4NE6B@976|Bacteroidetes,1INZ1@117747|Sphingobacteriia	976|Bacteroidetes	C	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit	sucD	-	6.2.1.5	ko:K01902	ko00020,ko00640,ko00660,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00640,map00660,map00720,map01100,map01110,map01120,map01130,map01200	M00009,M00011,M00173,M00374,M00620	R00405,R02404	RC00004,RC00014	ko00000,ko00001,ko00002,ko01000	-	-	-	CoA_binding,Ligase_CoA,Succ_CoA_lig
BYD3_k127_2123511_5	592010.GCWU000182_000686	6.189e-20	99.0	COG1277@1|root,COG1277@2|Bacteria,1V1P1@1239|Firmicutes,4HCZ3@91061|Bacilli	91061|Bacilli	S	COG1277 ABC-type transport system involved in multi-copper enzyme maturation, permease component	-	-	-	ko:K01992	-	M00254	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	ABC2_membrane_2
BYD3_k127_2123511_3	1131730.BAVI_16332	2.116e-94	319.0	COG1131@1|root,COG1131@2|Bacteria,1TQHS@1239|Firmicutes,4HC34@91061|Bacilli,1ZCRG@1386|Bacillus	91061|Bacilli	V	COG1131 ABC-type multidrug transport system, ATPase component	-	-	-	ko:K01990	-	M00254	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	ABC_tran,DUF4162
BYD3_k127_2123511_1	1121129.KB903359_gene1698	2.654e-157	509.0	COG0486@1|root,COG0486@2|Bacteria,4NECT@976|Bacteroidetes,2FMER@200643|Bacteroidia,22WKU@171551|Porphyromonadaceae	976|Bacteroidetes	S	Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34	mnmE	-	-	ko:K03650	-	-	R08701	RC00053,RC00209,RC00870	ko00000,ko01000,ko03016	-	-	-	MMR_HSR1,MnmE_helical,TrmE_N
BYD3_k127_2123511_6	1417296.U879_13885	3.73e-16	80.0	COG2181@1|root,COG2181@2|Bacteria,1MXGZ@1224|Proteobacteria,2TTDB@28211|Alphaproteobacteria	28211|Alphaproteobacteria	C	nitrate reductase, gamma subunit	narI	-	1.7.5.1	ko:K00374	ko00910,ko01120,ko02020,map00910,map01120,map02020	M00529,M00530	R00798,R01106,R09497	RC02812	ko00000,ko00001,ko00002,ko01000	5.A.3.1	-	-	Nitrate_red_gam
BYD3_k127_2123511_9	643867.Ftrac_1217	9.533e-07	56.0	2A8WT@1|root,30Y07@2|Bacteria,4PBNK@976|Bacteroidetes,47W3D@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_2123511_0	886379.AEWI01000022_gene197	0.0	1073.0	COG3696@1|root,COG3696@2|Bacteria,4P36A@976|Bacteroidetes,2FMH3@200643|Bacteroidia,3XITX@558415|Marinilabiliaceae	976|Bacteroidetes	P	AcrB/AcrD/AcrF family	-	-	-	ko:K15726	-	-	-	-	ko00000,ko02000	2.A.6.1.2	-	-	ACR_tran,OEP
BYD3_k127_2136476_6	1121405.dsmv_0802	1.512e-05	48.0	COG0399@1|root,COG0399@2|Bacteria,1N0QW@1224|Proteobacteria,42W70@68525|delta/epsilon subdivisions,2WRUT@28221|Deltaproteobacteria,2MNXP@213118|Desulfobacterales	28221|Deltaproteobacteria	J	23S rRNA-intervening sequence protein	-	-	-	-	-	-	-	-	-	-	-	-	23S_rRNA_IVP
BYD3_k127_2136476_1	1408473.JHXO01000005_gene1744	1.034e-139	457.0	COG5000@1|root,COG5000@2|Bacteria,4NEWF@976|Bacteroidetes,2FP7E@200643|Bacteroidia	976|Bacteroidetes	T	ATPase histidine kinase DNA gyrase B HSP90 domain protein	-	-	-	-	-	-	-	-	-	-	-	-	HATPase_c
BYD3_k127_2136476_0	886379.AEWI01000206_gene2404	1.036e-202	640.0	COG2204@1|root,COG2204@2|Bacteria,4NE89@976|Bacteroidetes,2FMTU@200643|Bacteroidia,3XIW0@558415|Marinilabiliaceae	976|Bacteroidetes	T	Bacterial regulatory protein, Fis family	-	-	-	-	-	-	-	-	-	-	-	-	HTH_8,Response_reg,Sigma54_activat
BYD3_k127_2136476_2	1121887.AUDK01000006_gene2935	8.255e-133	436.0	COG0845@1|root,COG0845@2|Bacteria,4NDUH@976|Bacteroidetes,1HZFG@117743|Flavobacteriia,2NTP8@237|Flavobacterium	976|Bacteroidetes	M	RND transporter	macA_2	-	-	ko:K02005	-	-	-	-	ko00000	-	-	-	Biotin_lipoyl_2,HlyD_3,HlyD_D23
BYD3_k127_2136476_3	643867.Ftrac_3424	6.603e-107	350.0	COG1136@1|root,COG1136@2|Bacteria,4NFDW@976|Bacteroidetes,47KMI@768503|Cytophagia	976|Bacteroidetes	V	ABC transporter	-	-	-	ko:K02003	-	M00258	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	ABC_tran
BYD3_k127_2136476_7	761193.Runsl_1941	2.28e-05	50.0	2E1JK@1|root,32WX8@2|Bacteria,4NTME@976|Bacteroidetes,47RMM@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_2136476_4	1168034.FH5T_10710	1.367e-78	279.0	COG1538@1|root,COG1538@2|Bacteria,4NEEN@976|Bacteroidetes,2FM98@200643|Bacteroidia	976|Bacteroidetes	MU	Outer membrane efflux protein	-	-	-	ko:K12340	ko01501,ko01503,ko02020,ko03070,ko04626,ko05133,map01501,map01503,map02020,map03070,map04626,map05133	M00325,M00326,M00339,M00571,M00575,M00646,M00647,M00696,M00697,M00709,M00720,M00821	-	-	ko00000,ko00001,ko00002,ko01504,ko02000,ko02044	1.B.17,2.A.6.2	-	-	OEP
BYD3_k127_2136476_5	485917.Phep_3044	3.29e-59	215.0	COG2610@1|root,COG2610@2|Bacteria,4NFQH@976|Bacteroidetes,1IQKX@117747|Sphingobacteriia	976|Bacteroidetes	EG	COGs COG2610 H gluconate symporter and related permease	-	-	-	ko:K03299	-	-	-	-	ko00000,ko02000	2.A.8	-	-	GntP_permease
BYD3_k127_2152116_4	927658.AJUM01000037_gene2265	2.388e-106	347.0	COG0740@1|root,COG0740@2|Bacteria,4NE20@976|Bacteroidetes,2FN8E@200643|Bacteroidia,3XJUH@558415|Marinilabiliaceae	976|Bacteroidetes	OU	Clp protease	clpP	-	3.4.21.92	ko:K01358	ko04112,ko04212,map04112,map04212	-	-	-	ko00000,ko00001,ko01000,ko01002	-	-	-	CLP_protease
BYD3_k127_2152116_1	411901.BACCAC_03379	3.24e-195	615.0	COG1219@1|root,COG1219@2|Bacteria,4NE1B@976|Bacteroidetes,2FMQV@200643|Bacteroidia,4ANSV@815|Bacteroidaceae	976|Bacteroidetes	O	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP	clpX	GO:0000166,GO:0003674,GO:0003824,GO:0004176,GO:0005488,GO:0005524,GO:0006508,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008233,GO:0009056,GO:0009057,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0019538,GO:0030163,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0042623,GO:0043167,GO:0043168,GO:0043170,GO:0044238,GO:0051301,GO:0070011,GO:0071704,GO:0097159,GO:0097367,GO:0140096,GO:1901265,GO:1901363,GO:1901564,GO:1901565,GO:1901575	-	ko:K03544	ko04112,map04112	-	-	-	ko00000,ko00001,ko03110	-	-	-	AAA_2,ClpB_D2-small,zf-C4_ClpX
BYD3_k127_2152116_2	1408473.JHXO01000001_gene2311	2.97e-189	602.0	COG0147@1|root,COG0147@2|Bacteria,4NFQ5@976|Bacteroidetes,2FN6I@200643|Bacteroidia	976|Bacteroidetes	EH	Anthranilate synthase component I	trpE	-	4.1.3.27	ko:K01657	ko00400,ko00405,ko01100,ko01110,ko01130,ko01230,ko02024,ko02025,map00400,map00405,map01100,map01110,map01130,map01230,map02024,map02025	M00023	R00985,R00986	RC00010,RC02148,RC02414	ko00000,ko00001,ko00002,ko01000	-	-	-	Anth_synt_I_N,Chorismate_bind
BYD3_k127_2152116_7	509635.N824_12190	5.522e-80	270.0	COG0512@1|root,COG0512@2|Bacteria,4NE4I@976|Bacteroidetes,1ISHY@117747|Sphingobacteriia	976|Bacteroidetes	EH	TIGRFAM glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase	trpG	-	4.1.3.27	ko:K01658	ko00400,ko00405,ko01100,ko01110,ko01130,ko01230,ko02024,ko02025,map00400,map00405,map01100,map01110,map01130,map01230,map02024,map02025	M00023	R00985,R00986	RC00010,RC02148,RC02414	ko00000,ko00001,ko00002,ko01000	-	-	-	GATase
BYD3_k127_2152116_3	1408473.JHXO01000001_gene2309	6.492e-123	402.0	COG0547@1|root,COG0547@2|Bacteria,4NH2J@976|Bacteroidetes,2FPE1@200643|Bacteroidia	976|Bacteroidetes	E	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)	trpD	GO:0000162,GO:0003674,GO:0003824,GO:0004048,GO:0006082,GO:0006520,GO:0006568,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009308,GO:0009309,GO:0009987,GO:0016053,GO:0016740,GO:0016757,GO:0016763,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0042401,GO:0042430,GO:0042435,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046219,GO:0046394,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607	2.4.2.18,4.1.3.27	ko:K00766,ko:K13497	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	M00023	R00985,R00986,R01073	RC00010,RC00440,RC02148,RC02414	ko00000,ko00001,ko00002,ko01000	-	-	-	Glycos_trans_3N,Glycos_transf_3
BYD3_k127_2152116_6	762903.Pedsa_2854	1.11e-80	277.0	COG0134@1|root,COG0134@2|Bacteria,4NFJT@976|Bacteroidetes,1IVUG@117747|Sphingobacteriia	976|Bacteroidetes	E	Belongs to the TrpC family	trpC	GO:0003674,GO:0003824,GO:0004425,GO:0016829,GO:0016830,GO:0016831	4.1.1.48	ko:K01609	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	M00023	R03508	RC00944	ko00000,ko00001,ko00002,ko01000	-	-	-	IGPS
BYD3_k127_2152116_8	926562.Oweho_3105	9.663e-62	219.0	COG0133@1|root,COG0135@1|root,COG0133@2|Bacteria,COG0135@2|Bacteria,4NDWP@976|Bacteroidetes,1HXYK@117743|Flavobacteriia	976|Bacteroidetes	E	The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine	trpB	GO:0000162,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006568,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009308,GO:0009309,GO:0009987,GO:0016053,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0042401,GO:0042430,GO:0042435,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046219,GO:0046394,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607	4.2.1.20,5.3.1.24	ko:K01696,ko:K01817	ko00260,ko00400,ko01100,ko01110,ko01130,ko01230,map00260,map00400,map01100,map01110,map01130,map01230	M00023	R00674,R02340,R02722,R03509	RC00209,RC00210,RC00700,RC00701,RC00945,RC02868	ko00000,ko00001,ko00002,ko01000	-	-	-	PALP
BYD3_k127_2152116_0	1484460.JSWG01000008_gene1948	1.928e-197	621.0	COG0133@1|root,COG0133@2|Bacteria,4NDWP@976|Bacteroidetes,1HXYK@117743|Flavobacteriia	976|Bacteroidetes	E	The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine	trpB	-	4.2.1.20,5.3.1.24	ko:K01696,ko:K01817	ko00260,ko00400,ko01100,ko01110,ko01130,ko01230,map00260,map00400,map01100,map01110,map01130,map01230	M00023	R00674,R02340,R02722,R03509	RC00209,RC00210,RC00700,RC00701,RC00945,RC02868	ko00000,ko00001,ko00002,ko01000	-	-	-	PALP
BYD3_k127_2152116_5	926559.JoomaDRAFT_2740	2.877e-97	325.0	COG0159@1|root,COG0159@2|Bacteria,4NE21@976|Bacteroidetes,1HYYA@117743|Flavobacteriia	976|Bacteroidetes	E	The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate	trpA	-	4.2.1.20	ko:K01695	ko00260,ko00400,ko01100,ko01110,ko01130,ko01230,map00260,map00400,map01100,map01110,map01130,map01230	M00023	R00674,R02340,R02722	RC00209,RC00210,RC00700,RC00701,RC02868	ko00000,ko00001,ko00002,ko01000	-	-	-	Trp_syntA
BYD3_k127_215792_3	1121904.ARBP01000003_gene6544	2.287e-05	46.0	COG3291@1|root,COG5184@1|root,COG3291@2|Bacteria,COG5184@2|Bacteria,4PPKF@976|Bacteroidetes,47VK5@768503|Cytophagia	976|Bacteroidetes	DZ	Pkd domain containing protein	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_215792_1	1408433.JHXV01000028_gene2134	2.045e-44	173.0	COG3064@1|root,COG3064@2|Bacteria,4PKYH@976|Bacteroidetes,1IJHH@117743|Flavobacteriia	976|Bacteroidetes	M	Type IX secretion system membrane protein PorP/SprF	-	-	-	-	-	-	-	-	-	-	-	-	PorP_SprF
BYD3_k127_215792_0	1408473.JHXO01000003_gene2579	2.059e-54	201.0	COG2220@1|root,COG2220@2|Bacteria,4NVGR@976|Bacteroidetes	976|Bacteroidetes	S	Beta-lactamase superfamily domain	-	-	-	-	-	-	-	-	-	-	-	-	Lactamase_B_2
BYD3_k127_2187477_1	1408473.JHXO01000010_gene3560	1.67e-105	345.0	COG1137@1|root,COG1137@2|Bacteria,4NDUG@976|Bacteroidetes,2FKZE@200643|Bacteroidia	976|Bacteroidetes	S	ABC transporter, ATP-binding protein	lptB	-	-	ko:K06861	ko02010,map02010	M00320	-	-	ko00000,ko00001,ko00002,ko01000,ko02000	1.B.42.1	-	-	ABC_tran,BCA_ABC_TP_C
BYD3_k127_2187477_2	1168034.FH5T_04875	7.302e-99	330.0	COG0805@1|root,COG0805@2|Bacteria,4NEKM@976|Bacteroidetes,2FNUF@200643|Bacteroidia	976|Bacteroidetes	U	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes	tatC	-	-	ko:K03118	ko03060,ko03070,map03060,map03070	M00336	-	-	ko00000,ko00001,ko00002,ko02044	2.A.64	-	-	TatC
BYD3_k127_2187477_3	1408473.JHXO01000010_gene3558	5.13e-58	204.0	COG0514@1|root,COG0514@2|Bacteria,4NEB4@976|Bacteroidetes,2FMBR@200643|Bacteroidia	976|Bacteroidetes	L	ATP-dependent DNA helicase RecQ	recQ	-	3.6.4.12	ko:K03654	ko03018,map03018	-	-	-	ko00000,ko00001,ko01000,ko03400	-	-	-	DEAD,HRDC,Helicase_C,RQC,RecQ_Zn_bind
BYD3_k127_2187477_0	1408473.JHXO01000010_gene3558	8.325e-224	699.0	COG0514@1|root,COG0514@2|Bacteria,4NEB4@976|Bacteroidetes,2FMBR@200643|Bacteroidia	976|Bacteroidetes	L	ATP-dependent DNA helicase RecQ	recQ	-	3.6.4.12	ko:K03654	ko03018,map03018	-	-	-	ko00000,ko00001,ko01000,ko03400	-	-	-	DEAD,HRDC,Helicase_C,RQC,RecQ_Zn_bind
BYD3_k127_2187987_9	1211815.CBYP010000024_gene1540	1.561e-06	61.0	COG3291@1|root,COG3291@2|Bacteria,2GN7G@201174|Actinobacteria,4ETCD@85013|Frankiales	201174|Actinobacteria	S	Laminin G domain	wcoG	-	-	-	-	-	-	-	-	-	-	-	Laminin_G_3,PKD
BYD3_k127_2187987_7	945713.IALB_3126	3.125e-28	131.0	COG4412@1|root,COG4412@2|Bacteria	2|Bacteria	S	peptidase activity, acting on L-amino acid peptides	ina	-	-	-	-	-	-	-	-	-	-	-	PDZ_2,Peptidase_M6
BYD3_k127_2187987_6	1232410.KI421418_gene2349	3.906e-36	152.0	COG2133@1|root,COG2755@1|root,COG3209@1|root,COG3866@1|root,COG2133@2|Bacteria,COG2755@2|Bacteria,COG3209@2|Bacteria,COG3866@2|Bacteria,1R2HQ@1224|Proteobacteria,42ZN7@68525|delta/epsilon subdivisions,2WUV4@28221|Deltaproteobacteria	28221|Deltaproteobacteria	GM	PFAM Di-glucose binding within endoplasmic reticulum	-	-	-	-	-	-	-	-	-	-	-	-	Malectin
BYD3_k127_2187987_1	1408473.JHXO01000011_gene3200	2.731e-149	486.0	COG0507@1|root,COG0507@2|Bacteria,4NDYK@976|Bacteroidetes,2FNT1@200643|Bacteroidia	976|Bacteroidetes	L	COG0507 ATP-dependent exoDNAse (exonuclease V) alpha subunit - helicase superfamily I member	recD2_2	-	3.1.11.5	ko:K01144	-	-	-	-	ko00000,ko01000	-	-	-	AAA_30,UvrD_C_2
BYD3_k127_2187987_8	867902.Ornrh_2145	2.279e-07	62.0	2DRFT@1|root,33BJ0@2|Bacteria,4NZ61@976|Bacteroidetes,1I69B@117743|Flavobacteriia	976|Bacteroidetes	S	Protein of unknown function (DUF3822)	-	-	-	-	-	-	-	-	-	-	-	-	DUF3822
BYD3_k127_2187987_5	1408310.JHUW01000007_gene462	1.245e-55	199.0	COG0742@1|root,COG0742@2|Bacteria,4NM7J@976|Bacteroidetes,2FSR0@200643|Bacteroidia	976|Bacteroidetes	L	RNA methyltransferase, RsmD family	rsmD	-	2.1.1.171	ko:K08316	-	-	R07234	RC00003	ko00000,ko01000,ko03009	-	-	-	Cons_hypoth95
BYD3_k127_2187987_4	765913.ThidrDRAFT_3543	3.582e-86	291.0	COG2148@1|root,COG2148@2|Bacteria	2|Bacteria	M	undecaprenyl-phosphate glucose phosphotransferase activity	-	-	5.1.3.2	ko:K01784	ko00052,ko00520,ko01100,map00052,map00520,map01100	M00361,M00362,M00632	R00291,R02984	RC00289	ko00000,ko00001,ko00002,ko01000	-	-	-	Bac_transf
BYD3_k127_2187987_10	1313421.JHBV01000002_gene551	0.0001857	44.0	2DRWY@1|root,33DG4@2|Bacteria	2|Bacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_2187987_0	1168034.FH5T_12280	7.502e-218	686.0	COG0312@1|root,COG0312@2|Bacteria,4NG2Y@976|Bacteroidetes,2FN09@200643|Bacteroidia	976|Bacteroidetes	S	Tat pathway signal sequence domain protein	tldD1	-	-	ko:K03568	-	-	-	-	ko00000,ko01002	-	-	-	PmbA_TldD
BYD3_k127_2187987_3	1168034.FH5T_12275	5.32e-131	432.0	COG0312@1|root,COG0312@2|Bacteria,4NE1F@976|Bacteroidetes,2FPXY@200643|Bacteroidia	976|Bacteroidetes	S	Psort location Cytoplasmic, score 9.26	tldD3	-	-	ko:K03592	-	-	-	-	ko00000,ko01002	-	-	-	PmbA_TldD
BYD3_k127_2187987_2	1122621.ATZA01000021_gene1747	7.786e-147	493.0	COG0577@1|root,COG0577@2|Bacteria,4NDUK@976|Bacteroidetes,1INSB@117747|Sphingobacteriia	976|Bacteroidetes	V	TIGRFAM Acidobacterial duplicated orphan permease	-	-	-	ko:K02004	-	M00258	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	FtsX,MacB_PCD
BYD3_k127_2191066_4	1237149.C900_04741	3.15e-12	70.0	COG1629@1|root,COG4771@2|Bacteria,4PHVG@976|Bacteroidetes,47VPP@768503|Cytophagia	976|Bacteroidetes	P	TonB-dependent Receptor Plug Domain	-	-	-	-	-	-	-	-	-	-	-	-	Plug
BYD3_k127_2191066_2	1080067.BAZH01000014_gene437	5.76e-53	191.0	COG1917@1|root,COG1917@2|Bacteria,1RHHY@1224|Proteobacteria	1224|Proteobacteria	S	Cupin 2, conserved barrel	-	-	-	-	-	-	-	-	-	-	-	-	Cupin_2,Cupin_3
BYD3_k127_2191066_3	1338011.BD94_2825	3.597e-30	131.0	COG2207@1|root,COG2207@2|Bacteria,4NI3R@976|Bacteroidetes,1I0PS@117743|Flavobacteriia,34R5R@308865|Elizabethkingia	976|Bacteroidetes	K	helix_turn_helix, arabinose operon control protein	-	-	-	-	-	-	-	-	-	-	-	-	AraC_binding,HTH_18
BYD3_k127_2191066_1	1121904.ARBP01000014_gene140	4.196e-146	475.0	COG0477@1|root,COG0477@2|Bacteria,4PKTJ@976|Bacteroidetes,47YD9@768503|Cytophagia	976|Bacteroidetes	EGP	Sugar (and other) transporter	araE	-	-	ko:K08139	ko04113,map04113	-	-	-	ko00000,ko00001,ko02000	2.A.1.1	-	-	Sugar_tr
BYD3_k127_2191066_5	742727.HMPREF9447_00434	2.084e-11	72.0	2924H@1|root,2ZPPH@2|Bacteria,4NNST@976|Bacteroidetes,2FR7C@200643|Bacteroidia,4AND5@815|Bacteroidaceae	976|Bacteroidetes	S	Domain of unknown function (DUF4251)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4251
BYD3_k127_2191066_0	1168034.FH5T_04715	1.144e-211	676.0	COG0323@1|root,COG0323@2|Bacteria,4NDWJ@976|Bacteroidetes,2FMIK@200643|Bacteroidia	976|Bacteroidetes	L	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex	mutL	GO:0003674,GO:0003676,GO:0003677,GO:0003697,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0032300,GO:0032991,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1990391	-	ko:K03572	ko03430,map03430	-	-	-	ko00000,ko00001,ko03400	-	-	-	DNA_mis_repair,HATPase_c_3,MutL_C
BYD3_k127_2374866_1	742726.HMPREF9448_00869	8.871e-159	511.0	2EX1H@1|root,33QCM@2|Bacteria,4NZT6@976|Bacteroidetes,2FM6B@200643|Bacteroidia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_2374866_0	714943.Mucpa_2763	1.417e-207	659.0	COG1501@1|root,COG1501@2|Bacteria,4NJ93@976|Bacteroidetes,1IRJ9@117747|Sphingobacteriia	976|Bacteroidetes	G	Belongs to the glycosyl hydrolase 31 family	-	-	3.2.1.20	ko:K01187	ko00052,ko00500,ko01100,map00052,map00500,map01100	-	R00028,R00801,R00802,R06087,R06088	RC00028,RC00049,RC00077	ko00000,ko00001,ko01000	-	GH31	-	Glyco_hydro_31
BYD3_k127_2409339_12	1469948.JPNB01000002_gene3380	1.316e-13	74.0	COG2197@1|root,COG2197@2|Bacteria,1TRXG@1239|Firmicutes,24FZX@186801|Clostridia,36H48@31979|Clostridiaceae	186801|Clostridia	K	response regulator, receiver	degU	-	-	-	-	-	-	-	-	-	-	-	GerE,Response_reg
BYD3_k127_2409339_11	886379.AEWI01000029_gene204	1.453e-15	82.0	2AD7J@1|root,312WH@2|Bacteria,4NR1A@976|Bacteroidetes,2G24U@200643|Bacteroidia,3XK3Q@558415|Marinilabiliaceae	976|Bacteroidetes	S	Domain of unknown function (DUF1987)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1987
BYD3_k127_2409339_13	1121899.Q764_03985	1.426e-10	70.0	COG3595@1|root,COG3595@2|Bacteria,4NIA2@976|Bacteroidetes,1I0CY@117743|Flavobacteriia,2NUJ6@237|Flavobacterium	976|Bacteroidetes	S	Putative auto-transporter adhesin, head GIN domain	-	-	-	-	-	-	-	-	-	-	-	-	DUF2807
BYD3_k127_2409339_3	1235813.JCM10003_1367	9.569e-70	250.0	COG1211@1|root,COG1211@2|Bacteria,4NMB5@976|Bacteroidetes,2FM5H@200643|Bacteroidia,4AM6P@815|Bacteroidaceae	976|Bacteroidetes	I	Catalyzes the formation of 4-diphosphocytidyl-2-C- methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4- phosphate (MEP)	ispD	GO:0003674,GO:0003824,GO:0016740,GO:0016772,GO:0016779,GO:0050518,GO:0070567	2.7.7.60	ko:K00991	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	M00096	R05633	RC00002	ko00000,ko00001,ko00002,ko01000	-	-	-	IspD
BYD3_k127_2409339_5	483216.BACEGG_02615	7.19e-57	205.0	COG5587@1|root,COG5587@2|Bacteria,4NNS3@976|Bacteroidetes,2FPZZ@200643|Bacteroidia,4AKXV@815|Bacteroidaceae	976|Bacteroidetes	S	TIGR02453 family	-	-	-	-	-	-	-	-	-	-	-	-	DUF2461
BYD3_k127_2409339_8	927658.AJUM01000022_gene1289	3.29e-49	183.0	COG1102@1|root,COG1102@2|Bacteria,4NU66@976|Bacteroidetes,2G20S@200643|Bacteroidia,3XJCI@558415|Marinilabiliaceae	976|Bacteroidetes	F	Cytidylate kinase-like family	-	-	-	-	-	-	-	-	-	-	-	-	Cytidylate_kin2
BYD3_k127_2409339_4	1408473.JHXO01000001_gene2085	4.018e-63	221.0	COG0503@1|root,COG0503@2|Bacteria,4NP7K@976|Bacteroidetes,2FPJ4@200643|Bacteroidia	976|Bacteroidetes	F	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis	apt	-	2.4.2.7	ko:K00759	ko00230,ko01100,map00230,map01100	-	R00190,R01229,R04378	RC00063	ko00000,ko00001,ko01000,ko04147	-	-	-	Pribosyltran
BYD3_k127_2409339_6	869213.JCM21142_104	3.601e-55	202.0	COG2846@1|root,COG2846@2|Bacteria,4NPQ7@976|Bacteroidetes,47QJX@768503|Cytophagia	976|Bacteroidetes	D	Di-iron-containing protein involved in the repair of iron-sulfur clusters	-	-	-	ko:K07322	-	-	-	-	ko00000	-	-	-	Hemerythrin
BYD3_k127_2409339_10	385682.AFSL01000053_gene458	2.006e-26	117.0	COG2197@1|root,COG2197@2|Bacteria,4NNVV@976|Bacteroidetes,2FN9B@200643|Bacteroidia,3XJTP@558415|Marinilabiliaceae	976|Bacteroidetes	KT	helix_turn_helix, Lux Regulon	-	-	-	-	-	-	-	-	-	-	-	-	GerE
BYD3_k127_2409339_0	679937.Bcop_0137	1.409e-185	600.0	COG0358@1|root,COG0358@2|Bacteria,4NENT@976|Bacteroidetes,2FMV1@200643|Bacteroidia,4AMR8@815|Bacteroidaceae	976|Bacteroidetes	L	RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication	dnaG	-	-	ko:K02316	ko03030,map03030	-	-	-	ko00000,ko00001,ko01000,ko03032	-	-	-	DnaB_bind,Toprim_2,Toprim_4,Toprim_N,zf-CHC2
BYD3_k127_2409339_9	869213.JCM21142_420	3.533e-39	150.0	COG1959@1|root,COG1959@2|Bacteria,4NQGU@976|Bacteroidetes,47RNG@768503|Cytophagia	976|Bacteroidetes	K	Transcriptional regulator	-	-	-	-	-	-	-	-	-	-	-	-	Rrf2
BYD3_k127_2409339_7	1121129.KB903371_gene170	1.856e-50	183.0	COG0698@1|root,COG0698@2|Bacteria,4NNSU@976|Bacteroidetes,2FT1X@200643|Bacteroidia,22XV0@171551|Porphyromonadaceae	976|Bacteroidetes	G	Ribose 5-phosphate isomerase	rpiB	-	5.3.1.6	ko:K01808	ko00030,ko00051,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00051,map00710,map01100,map01110,map01120,map01130,map01200,map01230	M00004,M00007,M00165,M00167	R01056,R09030	RC00376,RC00434	ko00000,ko00001,ko00002,ko01000	-	-	-	LacAB_rpiB
BYD3_k127_2409339_1	411477.PARMER_02684	9.843e-145	466.0	COG0379@1|root,COG0379@2|Bacteria,4NDVX@976|Bacteroidetes,2FMT0@200643|Bacteroidia,22VXC@171551|Porphyromonadaceae	976|Bacteroidetes	H	Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate	nadA	-	2.5.1.72	ko:K03517	ko00760,ko01100,map00760,map01100	M00115	R04292	RC01119	ko00000,ko00001,ko00002,ko01000	-	-	-	NadA
BYD3_k127_2409339_2	926562.Oweho_2308	2.058e-75	266.0	COG2849@1|root,COG2849@2|Bacteria,4NMDX@976|Bacteroidetes,1I51X@117743|Flavobacteriia,2PBM8@246874|Cryomorphaceae	976|Bacteroidetes	S	MORN repeat variant	-	-	-	-	-	-	-	-	-	-	-	-	MORN_2
BYD3_k127_2429507_2	1195236.CTER_0232	1.465e-99	341.0	COG1882@1|root,COG1882@2|Bacteria,1TPTF@1239|Firmicutes,247YY@186801|Clostridia,3WH79@541000|Ruminococcaceae	186801|Clostridia	C	Pyruvate formate lyase	-	-	2.3.1.54	ko:K00656	ko00620,ko00640,ko00650,ko01100,ko01120,map00620,map00640,map00650,map01100,map01120	-	R00212,R06987	RC00004,RC01181,RC02742,RC02833	ko00000,ko00001,ko01000	-	-	-	Gly_radical,PFL-like
BYD3_k127_2429507_4	1517681.HW45_08190	1.137e-89	304.0	COG1180@1|root,COG1180@2|Bacteria,1QJHU@1224|Proteobacteria,1RQUF@1236|Gammaproteobacteria,1XVM7@135623|Vibrionales	135623|Vibrionales	O	4Fe-4S single cluster domain	-	-	1.97.1.4	ko:K04069	-	-	R04710	-	ko00000,ko01000	-	-	-	Radical_SAM
BYD3_k127_2429507_3	1242864.D187_004781	2.889e-92	321.0	COG2730@1|root,COG2730@2|Bacteria,1R544@1224|Proteobacteria	1224|Proteobacteria	G	Protein of unknown function (DUF4038)	-	-	-	-	-	-	-	-	-	-	-	-	Collagen_bind_2,DUF4038
BYD3_k127_2429507_8	269798.CHU_3337	4.87e-55	206.0	COG2755@1|root,COG2755@2|Bacteria,4NFVN@976|Bacteroidetes,47Q1S@768503|Cytophagia	976|Bacteroidetes	E	GDSL-like Lipase/Acylhydrolase family	-	-	-	-	-	-	-	-	-	-	-	-	Lipase_GDSL_2
BYD3_k127_2429507_7	755731.Clo1100_2567	2.517e-66	239.0	COG2755@1|root,COG2755@2|Bacteria,1UM7Z@1239|Firmicutes,25GBF@186801|Clostridia,36VJF@31979|Clostridiaceae	186801|Clostridia	E	GDSL-like Lipase/Acylhydrolase	-	-	-	-	-	-	-	-	-	-	-	-	Dockerin_1,Lipase_GDSL_2
BYD3_k127_2429507_10	1408473.JHXO01000007_gene811	3.465e-25	121.0	295NE@1|root,2ZSZT@2|Bacteria,4NPQK@976|Bacteroidetes,2FSXA@200643|Bacteroidia	976|Bacteroidetes	S	DoxX	-	-	1.8.5.2	ko:K16937	ko00920,ko01120,map00920,map01120	-	R07177	-	ko00000,ko00001,ko01000	3.D.4.9	-	-	DoxX
BYD3_k127_2429507_11	234267.Acid_6615	2.624e-09	70.0	28KX8@1|root,2ZAD8@2|Bacteria	2|Bacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_2429507_6	1047013.AQSP01000130_gene1851	2.28e-69	250.0	COG1453@1|root,COG1453@2|Bacteria,2NNZZ@2323|unclassified Bacteria	2|Bacteria	S	Aldo/keto reductase family	-	-	-	ko:K07079	-	-	-	-	ko00000	-	-	-	Aldo_ket_red,Fer4_17
BYD3_k127_2429507_0	927658.AJUM01000017_gene3093	3.1e-234	730.0	COG2873@1|root,COG2873@2|Bacteria,4NE27@976|Bacteroidetes,2FMQX@200643|Bacteroidia,3XJ40@558415|Marinilabiliaceae	976|Bacteroidetes	E	DegT/DnrJ/EryC1/StrS aminotransferase family	-	-	2.5.1.49	ko:K01740	ko00270,ko01100,map00270,map01100	-	R01287,R04859	RC00020,RC02821,RC02848	ko00000,ko00001,ko01000	-	-	-	Cys_Met_Meta_PP
BYD3_k127_2429507_1	319225.Plut_1551	8.899e-156	496.0	COG0031@1|root,COG0031@2|Bacteria,1FD8M@1090|Chlorobi	1090|Chlorobi	H	PFAM Pyridoxal-5'-phosphate-dependent protein beta subunit	-	-	2.5.1.47	ko:K01738	ko00270,ko00920,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00270,map00920,map01100,map01110,map01120,map01130,map01200,map01230	M00021	R00897,R03601,R04859	RC00020,RC02814,RC02821	ko00000,ko00001,ko00002,ko01000	-	-	-	PALP
BYD3_k127_2429507_9	319225.Plut_1550	1.329e-52	193.0	COG2197@1|root,COG2197@2|Bacteria	2|Bacteria	K	response regulator	narL	-	-	-	-	-	-	-	-	-	-	-	GerE,Response_reg
BYD3_k127_2429507_5	935948.KE386494_gene960	2.328e-79	273.0	COG1606@1|root,COG1606@2|Bacteria,1TPB2@1239|Firmicutes,2485J@186801|Clostridia,42FCT@68295|Thermoanaerobacterales	186801|Clostridia	S	PFAM PP-loop domain protein	-	-	-	ko:K06864	-	-	-	-	ko00000	-	-	-	ATP_bind_3,NAD_synthase,QueC
BYD3_k127_2429507_12	485918.Cpin_3720	3.017e-05	46.0	COG2855@1|root,COG2855@2|Bacteria,4NES6@976|Bacteroidetes,1IQMA@117747|Sphingobacteriia	976|Bacteroidetes	S	PFAM Uncharacterised protein family UPF0324	-	-	-	-	-	-	-	-	-	-	-	-	Cons_hypoth698
BYD3_k127_2432219_2	585543.HMPREF0969_02666	1.576e-309	967.0	COG1629@1|root,COG1629@2|Bacteria,4NDXS@976|Bacteroidetes,2FM2D@200643|Bacteroidia,4AK7X@815|Bacteroidaceae	976|Bacteroidetes	P	TonB-linked outer membrane protein, SusC RagA family	-	-	-	-	-	-	-	-	-	-	-	-	CarbopepD_reg_2,Plug,STN,TonB_dep_Rec
BYD3_k127_2432219_6	411479.BACUNI_04700	2.172e-210	672.0	COG1435@1|root,COG1435@2|Bacteria,4NE0S@976|Bacteroidetes,2FMZF@200643|Bacteroidia,4AMTC@815|Bacteroidaceae	976|Bacteroidetes	F	COG NOG30008 non supervised orthologous group	-	-	-	ko:K21572	-	-	-	-	ko00000,ko02000	8.A.46.1,8.A.46.3	-	-	SusD-like_3,SusD_RagB
BYD3_k127_2432219_12	411479.BACUNI_04699	1.101e-63	227.0	2DC1C@1|root,2ZCDH@2|Bacteria,4NMEB@976|Bacteroidetes,2FMJW@200643|Bacteroidia,4ARZC@815|Bacteroidaceae	976|Bacteroidetes	S	Protein of unknown function (DUF3823)	-	-	-	-	-	-	-	-	-	-	-	-	DUF3823
BYD3_k127_2432219_0	763034.HMPREF9446_01642	0.0	1504.0	COG3386@1|root,COG3386@2|Bacteria,4NF4A@976|Bacteroidetes,2FSDK@200643|Bacteroidia,4AQC4@815|Bacteroidaceae	976|Bacteroidetes	G	SMP-30/Gluconolaconase/LRE-like region	-	-	3.1.1.17	ko:K01053	ko00030,ko00053,ko00930,ko01100,ko01110,ko01120,ko01130,ko01200,ko01220,map00030,map00053,map00930,map01100,map01110,map01120,map01130,map01200,map01220	M00129	R01519,R02933,R03751	RC00537,RC00983	ko00000,ko00001,ko00002,ko01000,ko04147	-	-	-	SGL
BYD3_k127_2432219_3	880074.BARVI_03030	8.496e-270	843.0	COG1874@1|root,COG1874@2|Bacteria,4PNM8@976|Bacteroidetes,2G105@200643|Bacteroidia,22YWU@171551|Porphyromonadaceae	976|Bacteroidetes	G	Beta-galactosidase	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_2432219_5	1122931.AUAE01000007_gene1342	8.69e-222	726.0	COG0457@1|root,COG0457@2|Bacteria,4NKMF@976|Bacteroidetes,2FXC5@200643|Bacteroidia,231HD@171551|Porphyromonadaceae	1122931.AUAE01000007_gene1342|-	S	Domain of unknown function (DUF5107)	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_2432219_1	411479.BACUNI_04697	0.0	1259.0	COG3386@1|root,COG3386@2|Bacteria,4PMW0@976|Bacteroidetes,2FW62@200643|Bacteroidia,4AT1W@815|Bacteroidaceae	976|Bacteroidetes	G	SMP-30/Gluconolaconase/LRE-like region	-	-	-	-	-	-	-	-	-	-	-	-	Pectate_lyase_3,SGL
BYD3_k127_2432219_4	1408473.JHXO01000013_gene536	1.256e-262	814.0	COG0442@1|root,COG0442@2|Bacteria,4NEAF@976|Bacteroidetes,2FMZT@200643|Bacteroidia	976|Bacteroidetes	J	Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro)	proS	GO:0003674,GO:0003824,GO:0004812,GO:0004827,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006433,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0017101,GO:0019538,GO:0019752,GO:0032991,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576	6.1.1.15	ko:K01881	ko00970,map00970	M00359,M00360	R03661	RC00055,RC00523	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	-	-	-	HGTP_anticodon,ProRS-C_1,tRNA-synt_2b
BYD3_k127_2432219_17	742726.HMPREF9448_01470	3.879e-05	56.0	2DM3I@1|root,31JQ3@2|Bacteria,4NRM4@976|Bacteroidetes,2FM1R@200643|Bacteroidia,22YC1@171551|Porphyromonadaceae	976|Bacteroidetes	S	Psort location OuterMembrane, score	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_2432219_11	927658.AJUM01000043_gene818	5.998e-65	241.0	COG2067@1|root,COG2067@2|Bacteria,4NFS7@976|Bacteroidetes,2FM7S@200643|Bacteroidia,3XJAI@558415|Marinilabiliaceae	976|Bacteroidetes	I	Outer membrane protein transport protein (OMPP1/FadL/TodX)	-	-	-	-	-	-	-	-	-	-	-	-	Toluene_X
BYD3_k127_2432219_10	435591.BDI_1235	2.43e-104	346.0	COG0336@1|root,COG0336@2|Bacteria,4NF2Q@976|Bacteroidetes,2FPQ5@200643|Bacteroidia,22WX6@171551|Porphyromonadaceae	976|Bacteroidetes	J	Belongs to the RNA methyltransferase TrmD family	trmD	GO:0001510,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008757,GO:0009019,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016423,GO:0016740,GO:0016741,GO:0016772,GO:0016779,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050518,GO:0070567,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360	2.1.1.228	ko:K00554	-	-	R00597	RC00003,RC00334	ko00000,ko01000,ko03016	-	-	-	tRNA_m1G_MT
BYD3_k127_2432219_7	1408473.JHXO01000008_gene2789	3.075e-184	608.0	COG2887@1|root,COG2887@2|Bacteria,4NFZQ@976|Bacteroidetes,2FN03@200643|Bacteroidia	976|Bacteroidetes	L	DNA-dependent ATPase I and helicase II	-	-	-	-	-	-	-	-	-	-	-	-	PDDEXK_1
BYD3_k127_2432219_15	1235815.BAIX01000048_gene2252	1.277e-09	61.0	COG2887@1|root,COG3893@1|root,COG2887@2|Bacteria,COG3893@2|Bacteria,4NFZQ@976|Bacteroidetes,2FN03@200643|Bacteroidia	976|Bacteroidetes	L	DNA-dependent ATPase I and helicase II	-	-	-	-	-	-	-	-	-	-	-	-	PDDEXK_1
BYD3_k127_2432219_9	927658.AJUM01000043_gene678	1.042e-109	383.0	COG0642@1|root,COG3290@1|root,COG2205@2|Bacteria,COG3290@2|Bacteria,4NDXU@976|Bacteroidetes,2FM06@200643|Bacteroidia,3XKJS@558415|Marinilabiliaceae	976|Bacteroidetes	T	His Kinase A (phosphoacceptor) domain	-	-	-	-	-	-	-	-	-	-	-	-	GAF,HATPase_c,HisKA,PAS_3,PAS_4,PAS_9,Response_reg
BYD3_k127_2432219_13	1122176.KB903543_gene591	6.32e-40	154.0	COG1595@1|root,COG1595@2|Bacteria,4NNBY@976|Bacteroidetes,1IS89@117747|Sphingobacteriia	976|Bacteroidetes	K	Belongs to the sigma-70 factor family. ECF subfamily	-	-	-	ko:K03088	-	-	-	-	ko00000,ko03021	-	-	-	Sigma70_r2,Sigma70_r4_2
BYD3_k127_2432219_14	1168034.FH5T_07755	2.271e-37	153.0	COG3712@1|root,COG3712@2|Bacteria,4NICU@976|Bacteroidetes,2FPP5@200643|Bacteroidia	976|Bacteroidetes	PT	Sigma factor regulatory protein, FecR PupR family	-	-	-	-	-	-	-	-	-	-	-	-	DUF4974,FecR
BYD3_k127_2432219_8	1122176.KB903543_gene589	4.647e-131	445.0	COG4206@1|root,COG4206@2|Bacteria,4PM6D@976|Bacteroidetes,1J101@117747|Sphingobacteriia	976|Bacteroidetes	H	Carboxypeptidase regulatory-like domain	-	-	-	-	-	-	-	-	-	-	-	-	CarbopepD_reg_2,Plug,TonB_dep_Rec
BYD3_k127_2467664_2	1519464.HY22_01480	5.258e-174	557.0	COG0841@1|root,COG0841@2|Bacteria	2|Bacteria	V	transmembrane transporter activity	-	-	-	-	-	-	-	-	-	-	-	-	ACR_tran
BYD3_k127_2467664_0	1123248.KB893359_gene1998	0.0	1048.0	COG4354@1|root,COG4354@2|Bacteria,4NFQW@976|Bacteroidetes,1IR0K@117747|Sphingobacteriia	976|Bacteroidetes	G	beta-glucosidase 2, glycosyl-hydrolase family 116 N-term	-	-	3.2.1.45	ko:K17108	ko00511,ko00600,ko01100,map00511,map00600,map01100	-	R01498	RC00059,RC00451	ko00000,ko00001,ko01000	-	GH116	-	DUF608,Glyco_hydr_116N
BYD3_k127_2467664_1	742766.HMPREF9455_02467	4.099e-201	631.0	COG4733@1|root,COG4733@2|Bacteria,4PMVV@976|Bacteroidetes,2G0IK@200643|Bacteroidia	976|Bacteroidetes	S	Protein of unknown function (DUF2961)	-	-	-	-	-	-	-	-	-	-	-	-	DUF2961
BYD3_k127_2467664_3	1121481.AUAS01000002_gene3410	9.025e-60	220.0	COG0577@1|root,COG0577@2|Bacteria,4NDUK@976|Bacteroidetes,47JJN@768503|Cytophagia	976|Bacteroidetes	V	FtsX-like permease family	-	-	-	-	-	-	-	-	-	-	-	-	FtsX,MacB_PCD
BYD3_k127_2486485_5	553171.HMPREF0648_0274	1.137e-104	346.0	COG1185@1|root,COG1185@2|Bacteria,4NE4Q@976|Bacteroidetes,2FN5H@200643|Bacteroidia	976|Bacteroidetes	J	Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction	pnp	-	2.7.7.8	ko:K00962	ko00230,ko00240,ko03018,map00230,map00240,map03018	M00394	R00437,R00438,R00439,R00440	RC02795	ko00000,ko00001,ko00002,ko01000,ko03016,ko03019	-	-	-	KH_1,PNPase,RNase_PH,RNase_PH_C,S1
BYD3_k127_2486485_2	869213.JCM21142_72668	1.469e-150	494.0	COG5010@1|root,COG5010@2|Bacteria,4PMJW@976|Bacteroidetes	976|Bacteroidetes	U	COG0457 FOG TPR repeat	-	-	-	-	-	-	-	-	-	-	-	-	TPR_8
BYD3_k127_2486485_8	926551.KB900713_gene2339	8.386e-68	235.0	COG0566@1|root,COG0566@2|Bacteria,4NM8C@976|Bacteroidetes,1HY0Q@117743|Flavobacteriia,1EQ5Z@1016|Capnocytophaga	976|Bacteroidetes	H	rna methyltransferase	spoU	-	-	-	-	-	-	-	-	-	-	-	SpoU_methylase
BYD3_k127_2486485_1	762903.Pedsa_1746	3.75e-191	602.0	COG0045@1|root,COG0045@2|Bacteria,4NFHA@976|Bacteroidetes,1IQ0Q@117747|Sphingobacteriia	976|Bacteroidetes	C	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit	sucC	-	6.2.1.5	ko:K01903	ko00020,ko00640,ko00660,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00640,map00660,map00720,map01100,map01110,map01120,map01130,map01200	M00009,M00011,M00173,M00374,M00620	R00405,R02404	RC00004,RC00014	ko00000,ko00001,ko00002,ko01000	-	-	-	ATP-grasp_2,Ligase_CoA
BYD3_k127_2486485_15	1123278.KB893577_gene1326	2.217e-10	64.0	COG3369@1|root,COG3592@1|root,COG3369@2|Bacteria,COG3592@2|Bacteria,4NVG3@976|Bacteroidetes,47QRI@768503|Cytophagia	976|Bacteroidetes	S	Divergent 4Fe-4S mono-cluster	-	-	-	-	-	-	-	-	-	-	-	-	Fer4_19,zf-CDGSH
BYD3_k127_2486485_10	1121904.ARBP01000012_gene1285	5.375e-39	150.0	COG3369@1|root,COG3592@1|root,COG3369@2|Bacteria,COG3592@2|Bacteria,4NVG3@976|Bacteroidetes,47QRI@768503|Cytophagia	976|Bacteroidetes	S	Divergent 4Fe-4S mono-cluster	-	-	-	-	-	-	-	-	-	-	-	-	Fer4_19,zf-CDGSH
BYD3_k127_2486485_11	385682.AFSL01000062_gene1615	5.575e-36	145.0	2CI1G@1|root,2Z7JA@2|Bacteria,4NF1T@976|Bacteroidetes,2FPFD@200643|Bacteroidia,3XJ9A@558415|Marinilabiliaceae	976|Bacteroidetes	S	Domain of unknown function (DUF4294)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4294
BYD3_k127_2486485_13	579137.Metvu_0890	1.421e-26	117.0	COG1514@1|root,arCOG01736@2157|Archaea,2XZ2M@28890|Euryarchaeota,23R23@183939|Methanococci	183939|Methanococci	J	Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester	-	GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008104,GO:0008150,GO:0009966,GO:0010646,GO:0010738,GO:0023051,GO:0033036,GO:0034237,GO:0044424,GO:0044444,GO:0044464,GO:0048583,GO:0050789,GO:0050794,GO:0051018,GO:0051179,GO:0065007,GO:1902531	3.1.4.58	ko:K01975	-	-	-	-	ko00000,ko01000,ko03016	-	-	-	LigT_PEase
BYD3_k127_2486485_3	1168034.FH5T_12365	1.898e-135	446.0	COG2148@1|root,COG2148@2|Bacteria,4NFIA@976|Bacteroidetes,2FMUQ@200643|Bacteroidia	976|Bacteroidetes	M	sugar transferase	-	-	-	-	-	-	-	-	-	-	-	-	Bac_transf,CoA_binding_3
BYD3_k127_2486485_14	1408433.JHXV01000036_gene269	2.364e-18	96.0	COG0673@1|root,COG0673@2|Bacteria,4NEC6@976|Bacteroidetes,1HXSP@117743|Flavobacteriia,2PA4G@246874|Cryomorphaceae	976|Bacteroidetes	S	PFAM Oxidoreductase family, NAD-binding Rossmann fold	-	-	-	-	-	-	-	-	-	-	-	-	GFO_IDH_MocA
BYD3_k127_2486485_6	1408473.JHXO01000006_gene1059	5.273e-94	312.0	COG2518@1|root,COG2518@2|Bacteria,4NFCU@976|Bacteroidetes,2FSTZ@200643|Bacteroidia	976|Bacteroidetes	O	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins	pcm	-	2.1.1.77	ko:K00573	-	-	-	-	ko00000,ko01000	-	-	-	PCMT
BYD3_k127_2486485_9	1048983.EL17_02935	5.557e-59	211.0	COG0491@1|root,COG0491@2|Bacteria,4NE2Y@976|Bacteroidetes,47PA3@768503|Cytophagia	976|Bacteroidetes	P	PFAM Metallo-beta-lactamase superfamily	-	-	-	-	-	-	-	-	-	-	-	-	Lactamase_B
BYD3_k127_2486485_0	1408473.JHXO01000006_gene1061	0.0	1182.0	COG0403@1|root,COG1003@1|root,COG0403@2|Bacteria,COG1003@2|Bacteria,4NEDE@976|Bacteroidetes,2FKZJ@200643|Bacteroidia	976|Bacteroidetes	E	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor	gcvP	-	1.4.4.2	ko:K00281,ko:K00283	ko00260,ko00630,ko01100,ko01110,ko01130,ko01200,map00260,map00630,map01100,map01110,map01130,map01200	M00532	R01221,R03425	RC00022,RC00929,RC02834,RC02880	ko00000,ko00001,ko00002,ko01000	-	-	-	Aminotran_5,GDC-P
BYD3_k127_2486485_12	1168034.FH5T_17650	3.89e-35	141.0	COG1595@1|root,COG1595@2|Bacteria,4NVR6@976|Bacteroidetes	976|Bacteroidetes	K	Sigma-70 region 2	-	-	-	-	-	-	-	-	-	-	-	-	Sigma70_r2
BYD3_k127_2486485_16	760192.Halhy_3428	4.924e-07	60.0	COG4783@1|root,COG4783@2|Bacteria,4NM73@976|Bacteroidetes,1IU03@117747|Sphingobacteriia	976|Bacteroidetes	S	chaperone-mediated protein folding	-	-	-	-	-	-	-	-	-	-	-	-	ANAPC3,TPR_16,TPR_19
BYD3_k127_2486485_7	1408473.JHXO01000016_gene1926	1.422e-82	307.0	COG0457@1|root,COG4995@1|root,COG0457@2|Bacteria,COG4995@2|Bacteria,4NHCZ@976|Bacteroidetes,2G2X1@200643|Bacteroidia	976|Bacteroidetes	S	CHAT domain	-	-	-	-	-	-	-	-	-	-	-	-	CHAT,TPR_12,TPR_7,TPR_8
BYD3_k127_2486485_4	1211813.CAPH01000018_gene970	6.363e-116	376.0	COG0564@1|root,COG0564@2|Bacteria,4NEV3@976|Bacteroidetes,2FMD1@200643|Bacteroidia,22UAE@171550|Rikenellaceae	976|Bacteroidetes	J	Responsible for synthesis of pseudouridine from uracil	rluD	-	5.4.99.23	ko:K06180	-	-	-	-	ko00000,ko01000,ko03009	-	-	-	PseudoU_synth_2,S4
BYD3_k127_249926_1	886379.AEWI01000008_gene695	5.09e-185	595.0	COG3291@1|root,COG3291@2|Bacteria,4NJAF@976|Bacteroidetes,2FQYI@200643|Bacteroidia,3XJSV@558415|Marinilabiliaceae	976|Bacteroidetes	G	Pkd domain containing protein	-	-	-	-	-	-	-	-	-	-	-	-	PKD
BYD3_k127_249926_2	929556.Solca_1173	2.728e-87	308.0	COG2913@1|root,COG2913@2|Bacteria,4PP6H@976|Bacteroidetes	976|Bacteroidetes	J	SusD family	-	-	-	ko:K21572	-	-	-	-	ko00000,ko02000	8.A.46.1,8.A.46.3	-	-	SusD-like_3,SusD_RagB
BYD3_k127_249926_0	869213.JCM21142_72890	1.903e-295	937.0	COG1629@1|root,COG4771@2|Bacteria,4P1Z5@976|Bacteroidetes,47Y6I@768503|Cytophagia	976|Bacteroidetes	P	TonB dependent receptor	-	-	-	-	-	-	-	-	-	-	-	-	CarbopepD_reg_2,Plug,TonB_dep_Rec
BYD3_k127_249926_3	1408473.JHXO01000011_gene3100	1.878e-36	141.0	COG2771@1|root,COG3292@1|root,COG2771@2|Bacteria,COG3292@2|Bacteria,4PM3P@976|Bacteroidetes,2G0AW@200643|Bacteroidia	976|Bacteroidetes	KT	Two component regulator propeller	-	-	-	-	-	-	-	-	-	-	-	-	Y_Y_Y
BYD3_k127_2505827_6	1189619.pgond44_05005	5.978e-09	63.0	2AE6H@1|root,3140B@2|Bacteria,4NSDV@976|Bacteroidetes,1I2EY@117743|Flavobacteriia,4C3VM@83612|Psychroflexus	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_2505827_0	1408433.JHXV01000014_gene3628	5.122e-166	553.0	COG3291@1|root,COG3291@2|Bacteria,4NFCW@976|Bacteroidetes,1I840@117743|Flavobacteriia,2PBAC@246874|Cryomorphaceae	976|Bacteroidetes	Q	Fibronectin type 3 domain	-	-	-	-	-	-	-	-	-	-	-	-	CHU_C
BYD3_k127_2505827_5	929703.KE386491_gene4028	7.538e-14	84.0	COG0457@1|root,COG0457@2|Bacteria,4NGGZ@976|Bacteroidetes,47JWQ@768503|Cytophagia	976|Bacteroidetes	S	TPR repeat-containing protein	-	-	-	-	-	-	-	-	-	-	-	-	TPR_1,TPR_11,TPR_16,TPR_2,TPR_8
BYD3_k127_2505827_2	869213.JCM21142_41635	8.404e-98	325.0	COG0287@1|root,COG0287@2|Bacteria,4NIUC@976|Bacteroidetes	976|Bacteroidetes	E	prephenate dehydrogenase	tyrA	-	1.3.1.12	ko:K00210	ko00400,ko00401,ko01100,ko01110,ko01130,ko01230,map00400,map00401,map01100,map01110,map01130,map01230	M00025	R01728	RC00125	ko00000,ko00001,ko00002,ko01000	-	-	-	PDH
BYD3_k127_2505827_1	909663.KI867150_gene1602	3.446e-146	469.0	COG0082@1|root,COG0082@2|Bacteria,1MU98@1224|Proteobacteria,42MF9@68525|delta/epsilon subdivisions,2WJ57@28221|Deltaproteobacteria,2MQCX@213462|Syntrophobacterales	28221|Deltaproteobacteria	E	Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system	aroC	-	4.2.3.5	ko:K01736	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	M00022	R01714	RC00586	ko00000,ko00001,ko00002,ko01000	-	-	-	Chorismate_synt
BYD3_k127_2505827_4	909663.KI867150_gene1599	1.513e-51	190.0	COG0710@1|root,COG0710@2|Bacteria,1NG0G@1224|Proteobacteria,42W3S@68525|delta/epsilon subdivisions,2WRJE@28221|Deltaproteobacteria,2MQQ7@213462|Syntrophobacterales	28221|Deltaproteobacteria	E	Involved in the third step of the chorismate pathway, which leads to the biosynthesis of aromatic amino acids. Catalyzes the cis-dehydration of 3-dehydroquinate (DHQ) and introduces the first double bond of the aromatic ring to yield 3- dehydroshikimate	aroD	-	4.2.1.10	ko:K03785	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	M00022	R03084	RC00848	ko00000,ko00001,ko00002,ko01000	-	-	-	DHquinase_I
BYD3_k127_2505827_3	177437.HRM2_06080	1.163e-88	300.0	COG0337@1|root,COG0337@2|Bacteria,1MUBK@1224|Proteobacteria,42MW5@68525|delta/epsilon subdivisions,2WJKR@28221|Deltaproteobacteria,2MIGY@213118|Desulfobacterales	28221|Deltaproteobacteria	E	Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)	aroB	-	4.2.3.4	ko:K01735	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	M00022	R03083	RC00847	ko00000,ko00001,ko00002,ko01000	-	-	-	DHQ_synthase
BYD3_k127_251013_0	504472.Slin_0947	2e-117	400.0	COG0577@1|root,COG0577@2|Bacteria,4NDUK@976|Bacteroidetes,47NWV@768503|Cytophagia	976|Bacteroidetes	V	MacB-like periplasmic core domain	-	-	-	ko:K02004	-	M00258	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	FtsX,MacB_PCD
BYD3_k127_2517927_5	1168289.AJKI01000001_gene3623	1.085e-100	339.0	COG2133@1|root,COG2133@2|Bacteria,4NEZC@976|Bacteroidetes,2FSM8@200643|Bacteroidia,3XJVX@558415|Marinilabiliaceae	976|Bacteroidetes	G	Glucose / Sorbosone dehydrogenase	-	-	-	ko:K21430	-	-	-	-	ko00000,ko01000	-	-	-	Cytochrome_CBB3,GSDH
BYD3_k127_2517927_9	929562.Emtol_0386	3.624e-60	214.0	COG0262@1|root,COG0262@2|Bacteria,4NPJF@976|Bacteroidetes,47Q1T@768503|Cytophagia	976|Bacteroidetes	H	Dihydrofolate reductase	-	-	-	-	-	-	-	-	-	-	-	-	RibD_C
BYD3_k127_2517927_11	1519464.HY22_14165	2.269e-47	178.0	COG1714@1|root,COG1714@2|Bacteria	2|Bacteria	S	RDD family	-	-	-	-	-	-	-	-	-	-	-	-	RDD
BYD3_k127_2517927_6	143224.JQMD01000002_gene1989	1.001e-97	329.0	COG1300@1|root,COG1300@2|Bacteria,4NG8D@976|Bacteroidetes,1HWW9@117743|Flavobacteriia	976|Bacteroidetes	S	membrane	-	-	-	-	-	-	-	-	-	-	-	-	SpoIIM
BYD3_k127_2517927_13	485917.Phep_0234	6.36e-34	141.0	COG1377@1|root,COG1377@2|Bacteria,4NMN3@976|Bacteroidetes,1ISAJ@117747|Sphingobacteriia	976|Bacteroidetes	NU	Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_2517927_16	1121288.AULL01000016_gene681	4.54e-11	72.0	29GF6@1|root,303CZ@2|Bacteria,4NR6I@976|Bacteroidetes,1I3H1@117743|Flavobacteriia,3ZR8E@59732|Chryseobacterium	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	DUF4129
BYD3_k127_2517927_8	927658.AJUM01000037_gene2201	5.715e-65	237.0	28IVH@1|root,2Z8TX@2|Bacteria,4NEEW@976|Bacteroidetes,2FMFB@200643|Bacteroidia,3XJYE@558415|Marinilabiliaceae	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	DUF4350
BYD3_k127_2517927_3	869213.JCM21142_355	3.684e-126	411.0	COG0714@1|root,COG0714@2|Bacteria,4NDVZ@976|Bacteroidetes,47KX2@768503|Cytophagia	976|Bacteroidetes	S	ATPase family associated with various cellular activities (AAA)	-	-	-	ko:K03924	-	-	-	-	ko00000,ko01000	-	-	-	AAA_3
BYD3_k127_2517927_2	391587.KAOT1_01589	2.855e-130	429.0	COG1721@1|root,COG1721@2|Bacteria,4NE10@976|Bacteroidetes,1HXIV@117743|Flavobacteriia	976|Bacteroidetes	S	protein (some members contain a von Willebrand factor type A (vWA) domain)	-	-	-	-	-	-	-	-	-	-	-	-	DUF58
BYD3_k127_2517927_17	592029.DDD_0369	0.0001261	49.0	2E37T@1|root,32Y7G@2|Bacteria,4NUTJ@976|Bacteroidetes,1IE89@117743|Flavobacteriia,3HM7R@363408|Nonlabens	976|Bacteroidetes	S	Protein of unknown function (DUF2752)	-	-	-	-	-	-	-	-	-	-	-	-	DUF2752
BYD3_k127_2517927_14	235279.HH_1821	3.316e-29	123.0	COG0791@1|root,COG0791@2|Bacteria,1N0EE@1224|Proteobacteria,42V3C@68525|delta/epsilon subdivisions,2YQCX@29547|Epsilonproteobacteria	29547|Epsilonproteobacteria	M	NlpC/P60 family	-	-	3.4.17.13	ko:K13694,ko:K13695	-	-	-	-	ko00000,ko01000,ko01002,ko01011	-	-	-	NLPC_P60,SPOR
BYD3_k127_2517927_0	1408473.JHXO01000006_gene1129	9.879e-181	589.0	COG3211@1|root,COG4935@1|root,COG3211@2|Bacteria,COG4935@2|Bacteria,4NH8G@976|Bacteroidetes,2G16U@200643|Bacteroidia	976|Bacteroidetes	O	CotH kinase protein	cotH	-	-	-	-	-	-	-	-	-	-	-	CHB_HEX_C_1,CotH,LTD,P_proprotein
BYD3_k127_2517927_1	1121904.ARBP01000026_gene694	9.305e-178	564.0	COG0673@1|root,COG0673@2|Bacteria,4NJ92@976|Bacteroidetes,47MAS@768503|Cytophagia	976|Bacteroidetes	S	Oxidoreductase family, NAD-binding Rossmann fold	-	-	-	-	-	-	-	-	-	-	-	-	GFO_IDH_MocA,GFO_IDH_MocA_C
BYD3_k127_2517927_10	926549.KI421517_gene2857	7.914e-51	186.0	COG3127@1|root,COG3127@2|Bacteria,4NN8S@976|Bacteroidetes,47P7G@768503|Cytophagia	976|Bacteroidetes	Q	membrane	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_2517927_12	742766.HMPREF9455_00877	4.319e-36	138.0	COG0640@1|root,COG0640@2|Bacteria,4NSAV@976|Bacteroidetes,2FTTA@200643|Bacteroidia,2322Z@171551|Porphyromonadaceae	976|Bacteroidetes	K	Winged helix DNA-binding domain	-	-	-	-	-	-	-	-	-	-	-	-	HTH_34
BYD3_k127_2517927_4	1168289.AJKI01000057_gene3094	4.843e-123	408.0	COG4452@1|root,COG4452@2|Bacteria,4NGKY@976|Bacteroidetes,2FN18@200643|Bacteroidia	976|Bacteroidetes	V	COG4452 Inner membrane protein involved in colicin E2 resistance	creD	-	-	ko:K06143	-	-	-	-	ko00000	-	-	-	CreD
BYD3_k127_2517927_15	1236514.BAKL01000137_gene5644	5.433e-28	117.0	COG0818@1|root,COG0818@2|Bacteria,4NQ39@976|Bacteroidetes,2FSJ8@200643|Bacteroidia,4AQWN@815|Bacteroidaceae	976|Bacteroidetes	M	Psort location CytoplasmicMembrane, score	dgkA	-	2.7.1.107,2.7.1.66	ko:K00887,ko:K00901	ko00550,ko00561,ko00564,ko01100,ko01110,ko04070,ko04072,ko05231,map00550,map00561,map00564,map01100,map01110,map04070,map04072,map05231	-	R02240,R05626	RC00002,RC00017	ko00000,ko00001,ko01000	-	-	-	DAGK_prokar
BYD3_k127_2517927_7	1250278.JQNQ01000001_gene3169	4.178e-78	273.0	COG0037@1|root,COG0037@2|Bacteria,4NEJS@976|Bacteroidetes,1HYBN@117743|Flavobacteriia	976|Bacteroidetes	D	Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine	tilS	-	6.3.4.19	ko:K04075	-	-	R09597	RC02633,RC02634	ko00000,ko01000,ko03016	-	-	-	ATP_bind_3,TilS_C
BYD3_k127_2542535_7	1313421.JHBV01000020_gene5201	8.039e-41	173.0	COG1481@1|root,COG2909@1|root,COG4995@1|root,COG1481@2|Bacteria,COG2909@2|Bacteria,COG4995@2|Bacteria,4NHCZ@976|Bacteroidetes	976|Bacteroidetes	K	COG0457 FOG TPR repeat	-	-	-	-	-	-	-	-	-	-	-	-	CHAT,TPR_12,TPR_8
BYD3_k127_2542535_8	1123278.KB893488_gene6102	8.332e-29	123.0	COG1595@1|root,COG1595@2|Bacteria,4NP91@976|Bacteroidetes,47PTK@768503|Cytophagia	976|Bacteroidetes	K	DNA-templated transcription, initiation	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_2542535_10	1120968.AUBX01000002_gene1497	3.662e-14	82.0	COG0457@1|root,COG0457@2|Bacteria,4NQ3P@976|Bacteroidetes,47YJC@768503|Cytophagia	976|Bacteroidetes	S	COG0457 FOG TPR repeat	-	-	-	-	-	-	-	-	-	-	-	-	TPR_6
BYD3_k127_2542535_5	1034347.CAHJ01000040_gene4459	1.057e-50	186.0	COG0406@1|root,COG0406@2|Bacteria,1V6ES@1239|Firmicutes,4HGZI@91061|Bacilli,1ZDQW@1386|Bacillus	91061|Bacilli	G	Belongs to the phosphoglycerate mutase family	yhfR	-	5.4.2.12	ko:K15634,ko:K15640	ko00010,ko00260,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00260,map00680,map01100,map01110,map01120,map01130,map01200,map01230	M00001,M00002,M00003	R01518	RC00536	ko00000,ko00001,ko00002,ko01000	-	-	-	His_Phos_1
BYD3_k127_2542535_9	504472.Slin_6176	3.299e-16	79.0	2DI4K@1|root,3020V@2|Bacteria,4NV1J@976|Bacteroidetes,47S4A@768503|Cytophagia	976|Bacteroidetes	S	Protein of unknown function (DUF2892)	-	-	-	-	-	-	-	-	-	-	-	-	DUF2892
BYD3_k127_2542535_6	1191523.MROS_0796	5.013e-42	159.0	COG3439@1|root,COG3439@2|Bacteria	2|Bacteria	D	Domain of unknown function DUF302	-	-	-	-	-	-	-	-	-	-	-	-	DUF302
BYD3_k127_2542535_2	1408473.JHXO01000009_gene3262	7.127e-147	476.0	COG1408@1|root,COG1408@2|Bacteria,4NFCH@976|Bacteroidetes,2FP07@200643|Bacteroidia	976|Bacteroidetes	S	Ser Thr phosphatase family protein	-	-	-	ko:K07098	-	-	-	-	ko00000	-	-	-	Metallophos,Metallophos_2
BYD3_k127_2542535_3	1392489.JPOL01000003_gene38	7.54e-143	462.0	COG0596@1|root,COG0596@2|Bacteria,4NFQZ@976|Bacteroidetes,1I7E5@117743|Flavobacteriia,2XK5C@283735|Leeuwenhoekiella	976|Bacteroidetes	S	Epoxide hydrolase N terminus	-	-	-	-	-	-	-	-	-	-	-	-	EHN
BYD3_k127_2542535_0	1121423.JONT01000007_gene518	3.154e-163	523.0	COG0006@1|root,COG0006@2|Bacteria,1TSXE@1239|Firmicutes,248AF@186801|Clostridia,260X2@186807|Peptococcaceae	186801|Clostridia	E	PFAM Metallopeptidase family M24	-	-	-	-	-	-	-	-	-	-	-	-	Creatinase_N,Peptidase_M24
BYD3_k127_2542535_4	926549.KI421517_gene2264	1.428e-142	470.0	COG1524@1|root,COG1524@2|Bacteria,4NE94@976|Bacteroidetes,47JP2@768503|Cytophagia	976|Bacteroidetes	P	type I phosphodiesterase nucleotide pyrophosphatase	pafA	GO:0003674,GO:0003824,GO:0004035,GO:0004346,GO:0005488,GO:0005575,GO:0005623,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008270,GO:0008877,GO:0009987,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0019203,GO:0042578,GO:0042597,GO:0043167,GO:0043169,GO:0044237,GO:0044464,GO:0046872,GO:0046914,GO:0050308,GO:0050309,GO:0098519	-	-	-	-	-	-	-	-	-	-	Phosphodiest
BYD3_k127_2542535_1	1121129.KB903367_gene2861	1.026e-159	525.0	COG4775@1|root,COG4775@2|Bacteria,4NDYT@976|Bacteroidetes,2FMTK@200643|Bacteroidia,22WRF@171551|Porphyromonadaceae	976|Bacteroidetes	M	CarboxypepD_reg-like domain	-	-	-	-	-	-	-	-	-	-	-	-	CarbopepD_reg_2
BYD3_k127_2553332_3	1499967.BAYZ01000068_gene1935	1.678e-31	131.0	COG3266@1|root,COG3420@1|root,COG4733@1|root,COG3266@2|Bacteria,COG3420@2|Bacteria,COG4733@2|Bacteria,2NS5M@2323|unclassified Bacteria	2|Bacteria	P	Fibronectin type 3 domain	-	-	-	ko:K12685,ko:K16785,ko:K16786,ko:K16787	ko02010,map02010	M00582	-	-	ko00000,ko00001,ko00002,ko01000,ko02000,ko02044	1.B.12.5.1,1.B.12.5.3,3.A.1.25,3.A.1.28,3.A.1.29,3.A.1.30,3.A.1.31,3.A.1.32,3.A.1.33,3.A.1.35	-	-	CHB_HEX_C_1,CHU_C,DUF1573,DUF285,F5_F8_type_C,Laminin_G_3,Lectin_legB,fn3
BYD3_k127_2553332_1	1237149.C900_00976	2.133e-54	193.0	COG0607@1|root,COG0607@2|Bacteria,4NPEU@976|Bacteroidetes,47QY3@768503|Cytophagia	976|Bacteroidetes	P	Rhodanese Homology Domain	-	-	-	-	-	-	-	-	-	-	-	-	Rhodanese
BYD3_k127_2553332_2	1137281.D778_01791	4.042e-47	171.0	2DZIM@1|root,32VBN@2|Bacteria,4NTG0@976|Bacteroidetes,1I4SS@117743|Flavobacteriia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_2553332_0	1385513.N780_18140	1.722e-118	388.0	COG1250@1|root,COG1250@2|Bacteria,1TPJS@1239|Firmicutes,4HA59@91061|Bacilli	91061|Bacilli	I	Dehydrogenase	-	-	1.1.1.157	ko:K00074	ko00360,ko00362,ko00650,ko01100,ko01120,map00360,map00362,map00650,map01100,map01120	-	R01976,R05576,R06941	RC00029,RC00117	ko00000,ko00001,ko01000	-	-	-	3HCDH,3HCDH_N
BYD3_k127_2599223_3	1121405.dsmv_3499	5.856e-27	114.0	COG0182@1|root,COG0182@2|Bacteria,1MUPM@1224|Proteobacteria,42MJ2@68525|delta/epsilon subdivisions,2WJQB@28221|Deltaproteobacteria,2MITS@213118|Desulfobacterales	28221|Deltaproteobacteria	E	Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P)	mtnA	-	5.3.1.23	ko:K08963	ko00270,ko01100,map00270,map01100	M00034	R04420	RC01151	ko00000,ko00001,ko00002,ko01000	-	-	-	IF-2B
BYD3_k127_2599223_2	714943.Mucpa_0547	8.047e-43	164.0	COG1011@1|root,COG1011@2|Bacteria,4NQT8@976|Bacteroidetes,1IS3Y@117747|Sphingobacteriia	976|Bacteroidetes	S	HAD-superfamily hydrolase subfamily IA, variant 3	yihX	-	3.1.3.10	ko:K20866	ko00010,ko01120,map00010,map01120	-	R00947	RC00078	ko00000,ko00001,ko01000	-	-	-	HAD_2
BYD3_k127_2599223_1	880074.BARVI_07235	4.349e-145	478.0	COG0821@1|root,COG0821@2|Bacteria,4NE63@976|Bacteroidetes,2FM97@200643|Bacteroidia,22WAH@171551|Porphyromonadaceae	976|Bacteroidetes	I	Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate	ispG	GO:0003674,GO:0003824,GO:0006081,GO:0006082,GO:0006090,GO:0006629,GO:0006644,GO:0006720,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0008654,GO:0009058,GO:0009240,GO:0009987,GO:0016491,GO:0016725,GO:0019288,GO:0019637,GO:0019682,GO:0019752,GO:0032787,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0046429,GO:0046490,GO:0052592,GO:0055114,GO:0071704,GO:0090407,GO:1901135,GO:1901576	1.17.7.1,1.17.7.3	ko:K03526	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	M00096	R08689,R10859	RC01486	ko00000,ko00001,ko00002,ko01000	-	-	-	GcpE
BYD3_k127_2599223_4	1123008.KB905693_gene1344	4.272e-14	80.0	2E6BV@1|root,330ZN@2|Bacteria,4NVXS@976|Bacteroidetes,2FVAV@200643|Bacteroidia,22YUM@171551|Porphyromonadaceae	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	OMP_b-brl,OMP_b-brl_2
BYD3_k127_2599223_0	927658.AJUM01000034_gene303	8.211e-212	667.0	COG0215@1|root,COG0215@2|Bacteria,4NE3Y@976|Bacteroidetes,2FM9D@200643|Bacteroidia,3XJJ7@558415|Marinilabiliaceae	976|Bacteroidetes	J	DALR_2	cysS	GO:0000166,GO:0003674,GO:0003824,GO:0004812,GO:0004817,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006423,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0017076,GO:0019538,GO:0019752,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0034645,GO:0034660,GO:0035639,GO:0036094,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0097159,GO:0097367,GO:0140098,GO:0140101,GO:1901265,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576	6.1.1.16	ko:K01883	ko00970,map00970	M00359,M00360	R03650	RC00055,RC00523	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	-	-	-	DALR_2,tRNA-synt_1e
BYD3_k127_2601025_2	1131812.JQMS01000001_gene2931	3.471e-180	597.0	COG3291@1|root,COG5492@1|root,COG3291@2|Bacteria,COG5492@2|Bacteria,4NH7Q@976|Bacteroidetes,1IIXN@117743|Flavobacteriia,2P0GV@237|Flavobacterium	976|Bacteroidetes	N	domain, Protein	-	-	-	-	-	-	-	-	-	-	-	-	TIG
BYD3_k127_2601025_3	1408473.JHXO01000004_gene230	8.698e-150	493.0	COG5002@1|root,COG5002@2|Bacteria,4NETP@976|Bacteroidetes,2FKYG@200643|Bacteroidia	976|Bacteroidetes	T	ATPase histidine kinase DNA gyrase B HSP90 domain protein	-	-	2.7.13.3	ko:K02484,ko:K07636	ko02020,map02020	M00434	-	-	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	-	-	-	HATPase_c,HisKA
BYD3_k127_2601025_12	742727.HMPREF9447_03726	1.487e-77	265.0	COG0745@1|root,COG0745@2|Bacteria,4NG7D@976|Bacteroidetes,2FMJH@200643|Bacteroidia,4AM2K@815|Bacteroidaceae	976|Bacteroidetes	K	COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain	srrA	-	-	ko:K07657,ko:K07658	ko02020,map02020	M00434	-	-	ko00000,ko00001,ko00002,ko02022	-	-	-	Response_reg,Trans_reg_C
BYD3_k127_2601025_11	402612.FP0360	4.124e-96	328.0	COG3746@1|root,COG3746@2|Bacteria,4NG5Z@976|Bacteroidetes,1I77C@117743|Flavobacteriia,2NSHC@237|Flavobacterium	976|Bacteroidetes	P	Pfam Phosphate-selective porin O and P	oprP	-	-	-	-	-	-	-	-	-	-	-	Porin_O_P
BYD3_k127_2601025_7	1131812.JQMS01000001_gene1237	8.508e-123	399.0	COG0226@1|root,COG0226@2|Bacteria,4NJGR@976|Bacteroidetes,1I2BC@117743|Flavobacteriia,2NTPT@237|Flavobacterium	976|Bacteroidetes	P	PBP superfamily domain	pstS	-	-	ko:K02040	ko02010,ko02020,ko05152,map02010,map02020,map05152	M00222	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.7	-	-	PBP_like_2
BYD3_k127_2601025_5	1121887.AUDK01000009_gene1299	3.429e-131	430.0	COG0573@1|root,COG0573@2|Bacteria,4NFDD@976|Bacteroidetes,1HYFF@117743|Flavobacteriia,2NS7H@237|Flavobacterium	976|Bacteroidetes	P	probably responsible for the translocation of the substrate across the membrane	pstC	-	-	ko:K02037	ko02010,map02010	M00222	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.7	-	-	BPD_transp_1,PBP_like_2
BYD3_k127_2601025_10	1131812.JQMS01000001_gene1240	4.667e-118	386.0	COG0581@1|root,COG0581@2|Bacteria,4NGBA@976|Bacteroidetes,1I16J@117743|Flavobacteriia,2NSWN@237|Flavobacterium	976|Bacteroidetes	P	permease protein PstA	pstA	-	-	ko:K02038	ko02010,map02010	M00222	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.7	-	-	BPD_transp_1
BYD3_k127_2601025_8	1034807.FBFL15_0389	2.234e-122	399.0	COG1117@1|root,COG1117@2|Bacteria,4NFAB@976|Bacteroidetes,1HZHC@117743|Flavobacteriia,2NSSM@237|Flavobacterium	976|Bacteroidetes	P	Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system	pstB	-	3.6.3.27	ko:K02036	ko02010,map02010	M00222	-	-	ko00000,ko00001,ko00002,ko01000,ko02000	3.A.1.7	-	-	ABC_tran
BYD3_k127_2601025_13	1131812.JQMS01000001_gene1242	8.679e-39	153.0	COG0704@1|root,COG0704@2|Bacteria,4NNT5@976|Bacteroidetes,1I1UU@117743|Flavobacteriia,2NTDB@237|Flavobacterium	976|Bacteroidetes	P	Plays a role in the regulation of phosphate uptake	phoU	-	-	ko:K02039	-	-	-	-	ko00000	-	-	-	PhoU
BYD3_k127_2601025_9	1408473.JHXO01000001_gene2379	1.496e-118	388.0	COG1600@1|root,COG1600@2|Bacteria,4NFCJ@976|Bacteroidetes,2FPCB@200643|Bacteroidia	976|Bacteroidetes	C	iron-sulfur cluster-binding protein	queG	-	1.17.99.6	ko:K18979	-	-	-	-	ko00000,ko01000,ko03016	-	-	-	DUF1730,Fer4_16
BYD3_k127_2601025_0	1168034.FH5T_05025	0.0	1119.0	COG0532@1|root,COG0532@2|Bacteria,4NGP3@976|Bacteroidetes,2FM01@200643|Bacteroidia	976|Bacteroidetes	J	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex	infB	-	-	ko:K02519	-	-	-	-	ko00000,ko03012,ko03029	-	-	-	GTP_EFTU,GTP_EFTU_D2,IF-2,IF2_N
BYD3_k127_2601025_1	1408473.JHXO01000001_gene2366	7.921e-214	669.0	COG0195@1|root,COG0195@2|Bacteria,4NFGA@976|Bacteroidetes,2FNJF@200643|Bacteroidia	976|Bacteroidetes	K	Participates in both transcription termination and antitermination	nusA	-	-	ko:K02600	-	-	-	-	ko00000,ko03009,ko03021	-	-	-	KH_5,NusA_N,S1
BYD3_k127_2601025_14	869213.JCM21142_72683	2.174e-27	117.0	COG0779@1|root,COG0779@2|Bacteria,4NQ32@976|Bacteroidetes	976|Bacteroidetes	S	Required for maturation of 30S ribosomal subunits	rimP	GO:0000028,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:1901564,GO:1901566,GO:1901576	-	ko:K09748	-	-	-	-	ko00000,ko03009	-	-	-	DUF150,DUF150_C
BYD3_k127_2601025_4	869213.JCM21142_72684	8.996e-140	456.0	COG1078@1|root,COG1078@2|Bacteria,4NE1T@976|Bacteroidetes,47JI5@768503|Cytophagia	976|Bacteroidetes	S	SMART Metal-dependent phosphohydrolase, HD region	-	-	-	ko:K06885	-	-	-	-	ko00000	-	-	-	HD
BYD3_k127_2601025_6	1168034.FH5T_05045	6.681e-123	404.0	COG1044@1|root,COG1044@2|Bacteria,4NE5G@976|Bacteroidetes,2FMZE@200643|Bacteroidia	976|Bacteroidetes	M	Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell	lpxD	-	2.3.1.191	ko:K02536	ko00540,ko01100,map00540,map01100	M00060	R04550	RC00039,RC00166	ko00000,ko00001,ko00002,ko01000,ko01005	-	-	-	Hexapep,Hexapep_2,LpxD
BYD3_k127_2607898_4	1163617.SCD_n01580	2.73e-13	70.0	COG0709@1|root,COG0709@2|Bacteria,1MWFG@1224|Proteobacteria,2VJSD@28216|Betaproteobacteria	28216|Betaproteobacteria	H	Synthesizes selenophosphate from selenide and ATP	selD	-	2.7.9.3	ko:K01008	ko00450,ko01100,map00450,map01100	-	R03595	RC00002,RC02878	ko00000,ko00001,ko01000,ko03016	-	-	-	AIRS,AIRS_C,Pyr_redox_2
BYD3_k127_2607898_2	385682.AFSL01000069_gene1479	1.516e-90	310.0	COG2603@1|root,COG2603@2|Bacteria,4NH7W@976|Bacteroidetes,2FPYI@200643|Bacteroidia,3XITS@558415|Marinilabiliaceae	976|Bacteroidetes	S	Rhodanese-like domain	-	-	-	ko:K06917	-	-	-	-	ko00000,ko01000,ko03016	-	-	-	Rhodanese
BYD3_k127_2607898_3	1461577.CCMH01000005_gene1929	2.467e-23	103.0	2C8RN@1|root,32RMQ@2|Bacteria,4NSD0@976|Bacteroidetes,1I3WH@117743|Flavobacteriia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_2607898_0	385682.AFSL01000088_gene912	4.544e-311	980.0	COG1026@1|root,COG1026@2|Bacteria,4PJ9W@976|Bacteroidetes,2G279@200643|Bacteroidia,3XKNA@558415|Marinilabiliaceae	976|Bacteroidetes	S	Peptidase M16C associated	-	-	-	-	-	-	-	-	-	-	-	-	M16C_assoc,Peptidase_M16_C
BYD3_k127_2607898_1	714943.Mucpa_3328	2.554e-150	486.0	COG3405@1|root,COG3405@2|Bacteria,4NIN5@976|Bacteroidetes	976|Bacteroidetes	G	hydrolase, family 8	-	-	3.2.1.156	ko:K15531	-	-	-	-	ko00000,ko01000	-	GH8	-	CBM9_1,Glyco_hydro_8
BYD3_k127_261045_4	471854.Dfer_3145	1.239e-42	169.0	COG2931@1|root,COG2931@2|Bacteria,4NKIR@976|Bacteroidetes,47S7V@768503|Cytophagia	976|Bacteroidetes	Q	SMART Integrin alpha beta-propellor repeat protein	-	-	-	-	-	-	-	-	-	-	-	-	CHU_C,FG-GAP,HYR,VCBS
BYD3_k127_261045_2	388413.ALPR1_19718	6.233e-307	976.0	COG4888@1|root,COG4888@2|Bacteria,4NEE8@976|Bacteroidetes,47MGE@768503|Cytophagia	976|Bacteroidetes	S	ASPIC and UnbV	-	-	-	-	-	-	-	-	-	-	-	-	UnbV_ASPIC,VCBS
BYD3_k127_261045_3	616991.JPOO01000003_gene1872	1.183e-55	206.0	COG4978@1|root,COG4978@2|Bacteria,4NHII@976|Bacteroidetes,1HYVM@117743|Flavobacteriia	976|Bacteroidetes	KT	PFAM Bacterial transcription activator, effector binding domain	-	-	-	-	-	-	-	-	-	-	-	-	GyrI-like
BYD3_k127_261045_1	1250278.JQNQ01000001_gene503	0.0	1153.0	COG4888@1|root,COG4888@2|Bacteria,4NEE8@976|Bacteroidetes,1HX4C@117743|Flavobacteriia	976|Bacteroidetes	S	PFAM ASPIC and UnbV	-	-	-	-	-	-	-	-	-	-	-	-	UnbV_ASPIC,VCBS
BYD3_k127_261045_0	1250278.JQNQ01000001_gene502	0.0	1267.0	COG4888@1|root,COG4888@2|Bacteria,4NEE8@976|Bacteroidetes,1HX4C@117743|Flavobacteriia	976|Bacteroidetes	S	PFAM ASPIC and UnbV	-	-	-	-	-	-	-	-	-	-	-	-	FG-GAP,UnbV_ASPIC,VCBS
BYD3_k127_261967_1	1009370.ALO_16377	2.168e-143	463.0	COG1181@1|root,COG1181@2|Bacteria,1TP2Y@1239|Firmicutes,4H1WX@909932|Negativicutes	909932|Negativicutes	F	Belongs to the D-alanine--D-alanine ligase family	-	-	6.3.2.4	ko:K01921	ko00473,ko00550,ko01100,ko01502,map00473,map00550,map01100,map01502	-	R01150	RC00064,RC00141	ko00000,ko00001,ko01000,ko01011	-	-	-	Dala_Dala_lig_C,Dala_Dala_lig_N
BYD3_k127_261967_0	880073.Calab_1134	2.069e-234	752.0	COG2091@1|root,COG2091@2|Bacteria,2NQGR@2323|unclassified Bacteria	2|Bacteria	H	lysine biosynthetic process via aminoadipic acid	-	-	-	-	-	-	-	-	-	-	-	-	CBM9_1
BYD3_k127_2654165_4	1168034.FH5T_00570	3.27e-25	108.0	COG2382@1|root,COG2382@2|Bacteria,4NFVV@976|Bacteroidetes,2FNXZ@200643|Bacteroidia	976|Bacteroidetes	P	Enterochelin esterase	-	-	-	ko:K07214	-	-	-	-	ko00000	-	-	-	CBM_48,Esterase
BYD3_k127_2654165_1	1168034.FH5T_04370	9.853e-172	547.0	COG0657@1|root,COG0657@2|Bacteria,4NKCZ@976|Bacteroidetes	976|Bacteroidetes	I	alpha beta	-	-	-	-	-	-	-	-	-	-	-	-	Abhydrolase_3
BYD3_k127_2654165_2	1121481.AUAS01000008_gene3075	4.825e-59	230.0	COG2373@1|root,COG2373@2|Bacteria,4NGYZ@976|Bacteroidetes,47M8I@768503|Cytophagia	976|Bacteroidetes	S	Large extracellular alpha-helical protein	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_2654165_3	1408473.JHXO01000008_gene2797	7.219e-59	218.0	28I8D@1|root,2Z8B7@2|Bacteria,4NM23@976|Bacteroidetes,2FQ8C@200643|Bacteroidia	976|Bacteroidetes	S	Domain of unknown function (DUF4249)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4249
BYD3_k127_2654165_0	1408473.JHXO01000008_gene2798	7.724e-211	673.0	COG1629@1|root,COG4771@2|Bacteria,4NF4B@976|Bacteroidetes,2FM7I@200643|Bacteroidia	976|Bacteroidetes	P	TonB-dependent receptor	-	-	-	-	-	-	-	-	-	-	-	-	CarbopepD_reg_2,Plug,TonB_dep_Rec
BYD3_k127_273306_1	1227739.Hsw_2017	7.749e-120	407.0	COG0308@1|root,COG0308@2|Bacteria,4NG5Q@976|Bacteroidetes,47JW1@768503|Cytophagia	976|Bacteroidetes	E	Peptidase M1, membrane alanine aminopeptidase	pepN1	-	3.4.11.2	ko:K01256	ko00480,ko01100,map00480,map01100	-	R00899,R04951	RC00096,RC00141	ko00000,ko00001,ko01000,ko01002	-	-	-	Peptidase_M1
BYD3_k127_273306_0	869213.JCM21142_72956	2.729e-167	547.0	COG0823@1|root,COG2885@1|root,COG0823@2|Bacteria,COG2885@2|Bacteria,4NE6G@976|Bacteroidetes,47MTM@768503|Cytophagia	976|Bacteroidetes	MU	Belongs to the ompA family	-	-	-	-	-	-	-	-	-	-	-	-	OmpA,PD40,TPR_16,TPR_2,TPR_8
BYD3_k127_273306_3	1408433.JHXV01000002_gene445	2.24e-31	136.0	COG4782@1|root,COG4782@2|Bacteria,4NS8M@976|Bacteroidetes	976|Bacteroidetes	S	Alpha/beta hydrolase of unknown function (DUF900)	-	-	-	-	-	-	-	-	-	-	-	-	DUF900
BYD3_k127_273306_2	1032480.MLP_36400	3.635e-32	138.0	COG0105@1|root,COG0105@2|Bacteria,2H7CM@201174|Actinobacteria	201174|Actinobacteria	F	UTP biosynthetic process	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_27394_5	106648.BBLJ01000033_gene2764	3.014e-65	232.0	COG0596@1|root,COG0596@2|Bacteria,1QPY5@1224|Proteobacteria,1TNQH@1236|Gammaproteobacteria,3NR37@468|Moraxellaceae	1236|Gammaproteobacteria	S	Alpha/beta hydrolase family	-	-	-	-	-	-	-	-	-	-	-	-	Abhydrolase_1
BYD3_k127_27394_0	926562.Oweho_0908	8.347e-131	428.0	COG3876@1|root,COG3876@2|Bacteria,4NEXD@976|Bacteroidetes,1HWQT@117743|Flavobacteriia,2PA75@246874|Cryomorphaceae	976|Bacteroidetes	S	Protein of unknown function (DUF1343)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1343
BYD3_k127_27394_1	1408473.JHXO01000011_gene2957	7.96e-127	418.0	COG4591@1|root,COG4591@2|Bacteria,4NFWZ@976|Bacteroidetes,2FMHC@200643|Bacteroidia	976|Bacteroidetes	M	Efflux ABC transporter, permease protein	lolE_1	-	-	ko:K09808	ko02010,map02010	M00255	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.125	-	-	FtsX,MacB_PCD
BYD3_k127_27394_6	1123057.P872_08345	1.643e-44	168.0	COG0494@1|root,COG0494@2|Bacteria,4NM6C@976|Bacteroidetes,47MQZ@768503|Cytophagia	976|Bacteroidetes	L	pfam nudix	-	-	-	-	-	-	-	-	-	-	-	-	NUDIX
BYD3_k127_27394_4	927658.AJUM01000037_gene2417	4.765e-71	243.0	COG4623@1|root,COG4623@2|Bacteria,4NHFW@976|Bacteroidetes,2FN2R@200643|Bacteroidia,3XJUD@558415|Marinilabiliaceae	976|Bacteroidetes	M	Bacterial periplasmic substrate-binding proteins	mltF	-	-	ko:K18691	-	-	-	-	ko00000,ko01000,ko01011	-	-	-	SBP_bac_3,SLT
BYD3_k127_27394_3	869213.JCM21142_41720	2.825e-76	265.0	COG4623@1|root,COG4623@2|Bacteria,4NHFW@976|Bacteroidetes,47NX6@768503|Cytophagia	976|Bacteroidetes	M	soluble lytic transglycosylase fused to an ABC-type amino acid-binding protein	mltF	-	-	ko:K18691	-	-	-	-	ko00000,ko01000,ko01011	-	-	-	SBP_bac_3,SLT
BYD3_k127_27394_2	927658.AJUM01000037_gene2418	1.503e-90	323.0	COG4206@1|root,COG4206@2|Bacteria,4NI2R@976|Bacteroidetes,2FNYT@200643|Bacteroidia,3XJ0F@558415|Marinilabiliaceae	976|Bacteroidetes	H	Putative porin	-	-	-	-	-	-	-	-	-	-	-	-	Porin_10
BYD3_k127_27394_7	1550091.JROE01000060_gene3964	2.639e-39	146.0	2DP8N@1|root,3311E@2|Bacteria,4NVIP@976|Bacteroidetes,1IZKT@117747|Sphingobacteriia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_2778005_2	880073.Calab_2998	2.458e-49	181.0	COG0378@1|root,COG0378@2|Bacteria,2NQNR@2323|unclassified Bacteria	2|Bacteria	KO	CobW/HypB/UreG, nucleotide-binding domain	hypB	-	-	ko:K04652	-	-	-	-	ko00000,ko03110	-	-	-	cobW
BYD3_k127_2778005_3	65093.PCC7418_1276	4.72e-16	81.0	COG0375@1|root,COG0375@2|Bacteria,1G89Y@1117|Cyanobacteria	1117|Cyanobacteria	S	Probably plays a role in a hydrogenase nickel cofactor insertion step	hypA	-	-	ko:K04651	-	-	-	-	ko00000,ko03110	-	-	-	HypA
BYD3_k127_2778005_1	635013.TherJR_1303	7.207e-112	370.0	COG0309@1|root,COG0309@2|Bacteria,1TQP4@1239|Firmicutes,24963@186801|Clostridia,260QH@186807|Peptococcaceae	186801|Clostridia	O	hydrogenase expression formation protein HypE	hypE	-	-	ko:K04655	-	-	-	-	ko00000	-	-	-	AIRS,AIRS_C
BYD3_k127_2778005_0	1168289.AJKI01000001_gene3608	1.874e-266	835.0	COG0339@1|root,COG0339@2|Bacteria,4NFYA@976|Bacteroidetes,2FN8J@200643|Bacteroidia,3XIUX@558415|Marinilabiliaceae	976|Bacteroidetes	E	Peptidase family M3	dcp	-	3.4.15.5,3.4.24.70	ko:K01284,ko:K01414	-	-	-	-	ko00000,ko01000,ko01002	-	-	-	Peptidase_M3
BYD3_k127_2811512_0	1347342.BN863_21730	5.492e-297	933.0	COG4888@1|root,COG4888@2|Bacteria,4NEE8@976|Bacteroidetes,1HX4C@117743|Flavobacteriia	976|Bacteroidetes	S	PFAM ASPIC and UnbV	-	-	-	-	-	-	-	-	-	-	-	-	FG-GAP,UnbV_ASPIC,VCBS
BYD3_k127_2811512_1	1121904.ARBP01000006_gene3953	1.321e-133	443.0	COG0702@1|root,COG0702@2|Bacteria,4PKHQ@976|Bacteroidetes,47JTI@768503|Cytophagia	976|Bacteroidetes	GM	SusD family	-	-	-	ko:K21572	-	-	-	-	ko00000,ko02000	8.A.46.1,8.A.46.3	-	-	SusD-like_3,SusD_RagB
BYD3_k127_2811512_2	688270.Celal_0860	6.976e-16	79.0	COG4888@1|root,COG4888@2|Bacteria,4NEE8@976|Bacteroidetes,1HX4C@117743|Flavobacteriia	976|Bacteroidetes	S	PFAM ASPIC and UnbV	-	-	-	-	-	-	-	-	-	-	-	-	FG-GAP,UnbV_ASPIC,VCBS
BYD3_k127_2849078_4	1121101.HMPREF1532_01162	3.138e-22	98.0	2FCIH@1|root,344MV@2|Bacteria,4P58U@976|Bacteroidetes,2FSGX@200643|Bacteroidia,4AQYV@815|Bacteroidaceae	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_2849078_2	296591.Bpro_1275	2.127e-56	199.0	COG4274@1|root,COG4274@2|Bacteria,1RKGA@1224|Proteobacteria	1224|Proteobacteria	S	GYD domain	-	-	-	-	-	-	-	-	-	-	-	-	GYD
BYD3_k127_2849078_3	296591.Bpro_1275	1.044e-54	196.0	COG4274@1|root,COG4274@2|Bacteria,1RKGA@1224|Proteobacteria	1224|Proteobacteria	S	GYD domain	-	-	-	-	-	-	-	-	-	-	-	-	GYD
BYD3_k127_2849078_1	1250005.PHEL85_1511	1.636e-109	372.0	COG1807@1|root,COG1807@2|Bacteria,4NHXW@976|Bacteroidetes,1I0KK@117743|Flavobacteriia	976|Bacteroidetes	M	glycosyl transferase	-	-	-	-	-	-	-	-	-	-	-	-	PMT_2
BYD3_k127_2849078_5	97139.C824_01831	5.152e-14	77.0	2DH26@1|root,2ZY4Z@2|Bacteria,1V3J9@1239|Firmicutes,24HRK@186801|Clostridia,36J4U@31979|Clostridiaceae	186801|Clostridia	S	Protein of unknown function (DUF3795)	-	-	-	-	-	-	-	-	-	-	-	-	DUF3795
BYD3_k127_2849078_0	1120966.AUBU01000018_gene240	1.43e-158	504.0	COG0657@1|root,COG0657@2|Bacteria,4PKKH@976|Bacteroidetes,47P2Y@768503|Cytophagia	976|Bacteroidetes	I	alpha/beta hydrolase fold	-	-	-	-	-	-	-	-	-	-	-	-	Abhydrolase_3
BYD3_k127_2998501_8	1121287.AUMU01000001_gene1572	7.601e-20	89.0	298NJ@1|root,2ZVT4@2|Bacteria,4NM57@976|Bacteroidetes,1I7UW@117743|Flavobacteriia,3ZPX7@59732|Chryseobacterium	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_2998501_6	526218.Sterm_4118	1.105e-32	131.0	arCOG04234@1|root,2ZQQ1@2|Bacteria	2|Bacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_2998501_3	1237149.C900_02624	4.214e-77	265.0	2C8XG@1|root,2Z7PK@2|Bacteria,4NEU8@976|Bacteroidetes,47P85@768503|Cytophagia	976|Bacteroidetes	S	Protein of unknown function (DUF4197)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4197
BYD3_k127_2998501_0	1150600.ADIARSV_0164	1.159e-218	692.0	COG0531@1|root,COG0531@2|Bacteria,4NDU2@976|Bacteroidetes,1IPFZ@117747|Sphingobacteriia	976|Bacteroidetes	E	amino acid	-	-	-	ko:K03294	-	-	-	-	ko00000	2.A.3.2	-	-	AA_permease_2,AA_permease_C
BYD3_k127_2998501_2	375286.mma_3163	5.065e-78	289.0	COG1195@1|root,COG3593@1|root,COG1195@2|Bacteria,COG3593@2|Bacteria,1P6A1@1224|Proteobacteria,2VXIJ@28216|Betaproteobacteria	28216|Betaproteobacteria	L	AAA ATPase domain	-	-	-	-	-	-	-	-	-	-	-	-	AAA_15
BYD3_k127_2998501_4	869213.JCM21142_31278	2.238e-67	238.0	COG2208@1|root,COG3292@1|root,COG2208@2|Bacteria,COG3292@2|Bacteria,4NHSC@976|Bacteroidetes,47XEJ@768503|Cytophagia	976|Bacteroidetes	KT	Sigma factor PP2C-like phosphatases	-	-	-	-	-	-	-	-	-	-	-	-	HisKA_3,Reg_prop,SpoIIE,Y_Y_Y
BYD3_k127_2998501_9	604354.TSIB_0743	7.57e-13	82.0	arCOG02559@1|root,arCOG02559@2157|Archaea,2XYKK@28890|Euryarchaeota,24394@183968|Thermococci	183968|Thermococci	KLT	Serine threonine protein kinase	-	-	-	-	-	-	-	-	-	-	-	-	DUF5122
BYD3_k127_2998501_5	869213.JCM21142_104350	1.37e-42	177.0	COG1413@1|root,COG1413@2|Bacteria	2|Bacteria	C	deoxyhypusine monooxygenase activity	-	-	-	-	-	-	-	-	-	-	-	-	HEAT_2,zf-ribbon_3
BYD3_k127_2998501_1	869213.JCM21142_104351	8.619e-140	454.0	COG2885@1|root,COG2885@2|Bacteria,4NKCW@976|Bacteroidetes,47V60@768503|Cytophagia	976|Bacteroidetes	M	OmpA family	-	-	-	-	-	-	-	-	-	-	-	-	OmpA
BYD3_k127_3157898_1	398512.JQKC01000045_gene1289	9.495e-179	580.0	COG0507@1|root,COG0507@2|Bacteria,1V4EE@1239|Firmicutes,24PY9@186801|Clostridia,3WN79@541000|Ruminococcaceae	186801|Clostridia	L	HRDC domain	-	-	-	-	-	-	-	-	-	-	-	-	HRDC,PIF1
BYD3_k127_3157898_3	385682.AFSL01000072_gene1342	8.429e-86	295.0	COG2207@1|root,COG2207@2|Bacteria,4PI6M@976|Bacteroidetes,2G21H@200643|Bacteroidia,3XKZG@558415|Marinilabiliaceae	976|Bacteroidetes	K	helix_turn_helix, arabinose operon control protein	-	-	-	-	-	-	-	-	-	-	-	-	HTH_18
BYD3_k127_3157898_2	1191523.MROS_0075	3.166e-133	432.0	COG0697@1|root,2Z7ID@2|Bacteria	2|Bacteria	EG	Uptake of L-rhamnose across the boundary membrane with the concomitant transport of protons into the cell (symport system)	rhaT	GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0008150,GO:0008643,GO:0008645,GO:0015291,GO:0015293,GO:0015749,GO:0015762,GO:0016020,GO:0022804,GO:0022857,GO:0034219,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071944	-	ko:K02856	-	-	-	-	ko00000,ko02000	2.A.7.6	-	iECSE_1348.ECSE_4196,iEcE24377_1341.EcE24377A_4438,iYL1228.KPN_04216	RhaT
BYD3_k127_3157898_4	1191523.MROS_0076	5.628e-44	163.0	COG3254@1|root,COG3254@2|Bacteria	2|Bacteria	S	rhamnose metabolic process	rhaU	-	5.1.3.32	ko:K03534	-	-	R10819	RC00563	ko00000,ko01000	-	-	-	rhaM
BYD3_k127_3157898_0	1191523.MROS_0074	2.057e-224	700.0	COG4806@1|root,COG4806@2|Bacteria	2|Bacteria	G	L-rhamnose isomerase activity	rhaA	GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005975,GO:0005996,GO:0008150,GO:0008152,GO:0008270,GO:0008740,GO:0009056,GO:0009987,GO:0016043,GO:0016052,GO:0016853,GO:0016860,GO:0016861,GO:0019299,GO:0019301,GO:0019318,GO:0019320,GO:0019321,GO:0019324,GO:0022607,GO:0030145,GO:0030246,GO:0032991,GO:0033296,GO:0036094,GO:0042802,GO:0043167,GO:0043169,GO:0043933,GO:0044085,GO:0044238,GO:0044281,GO:0044282,GO:0046365,GO:0046872,GO:0046914,GO:0048029,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0065003,GO:0071704,GO:0071840,GO:1901575	2.7.1.5,5.3.1.14	ko:K00848,ko:K01813	ko00040,ko00051,ko01120,map00040,map00051,map01120	-	R01902,R02437,R03014	RC00002,RC00017,RC00434	ko00000,ko00001,ko01000	-	-	iECIAI39_1322.ECIAI39_3092,iUMNK88_1353.UMNK88_4739	RhaA
BYD3_k127_3172699_2	504472.Slin_3666	1.576e-48	182.0	COG5637@1|root,COG5637@2|Bacteria,4NPW3@976|Bacteroidetes,47MMX@768503|Cytophagia	976|Bacteroidetes	S	Polyketide cyclase / dehydrase and lipid transport	-	-	-	-	-	-	-	-	-	-	-	-	DUF2892,Polyketide_cyc
BYD3_k127_3172699_1	1349785.BAUG01000031_gene1780	6.026e-83	284.0	COG5383@1|root,COG5383@2|Bacteria,4NGFT@976|Bacteroidetes,1I068@117743|Flavobacteriia	976|Bacteroidetes	S	DUF1338	-	-	-	-	-	-	-	-	-	-	-	-	DUF1338
BYD3_k127_3172699_0	485918.Cpin_4441	5.056e-216	674.0	COG1063@1|root,COG1063@2|Bacteria,4NE11@976|Bacteroidetes,1IPYZ@117747|Sphingobacteriia	976|Bacteroidetes	C	PFAM Alcohol dehydrogenase	-	-	-	-	-	-	-	-	-	-	-	-	ADH_N,ADH_N_assoc,ADH_zinc_N
BYD3_k127_3239745_2	886379.AEWI01000002_gene502	8.363e-43	159.0	293VW@1|root,2ZRB2@2|Bacteria,4NMK7@976|Bacteroidetes,2FUEE@200643|Bacteroidia,3XK52@558415|Marinilabiliaceae	976|Bacteroidetes	S	Gliding motility-associated lipoprotein GldD	gldD	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_3239745_4	762903.Pedsa_3585	2.174e-33	136.0	COG2091@1|root,COG2091@2|Bacteria,4NSBI@976|Bacteroidetes,1IRVW@117747|Sphingobacteriia	976|Bacteroidetes	H	Belongs to the P-Pant transferase superfamily	sfp	-	-	-	-	-	-	-	-	-	-	-	ACPS
BYD3_k127_3239745_0	869213.JCM21142_93424	6.925e-65	229.0	COG1646@1|root,COG1646@2|Bacteria,4NER8@976|Bacteroidetes,47MXM@768503|Cytophagia	976|Bacteroidetes	I	Prenyltransferase that catalyzes the transfer of the geranylgeranyl moiety of geranylgeranyl diphosphate (GGPP) to the C3 hydroxyl of sn-glycerol-1-phosphate (G1P)	pcrB	-	-	ko:K07094	-	-	-	-	ko00000,ko01000	-	-	-	PcrB
BYD3_k127_3239745_3	742725.HMPREF9450_01041	2.257e-35	138.0	COG1188@1|root,COG1188@2|Bacteria,4NP8I@976|Bacteroidetes,2FRYM@200643|Bacteroidia,22UJE@171550|Rikenellaceae	976|Bacteroidetes	J	S4 RNA-binding domain	hslR	-	-	ko:K04762	-	-	-	-	ko00000,ko03110	-	-	-	S4
BYD3_k127_3239745_1	1349822.NSB1T_08400	9.769e-47	173.0	2CGY7@1|root,2ZGS8@2|Bacteria,4NREX@976|Bacteroidetes,2FPIK@200643|Bacteroidia,22XT2@171551|Porphyromonadaceae	976|Bacteroidetes	S	Domain of unknown function (DUF4924)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4924
BYD3_k127_325769_0	927658.AJUM01000022_gene1058	7.614e-321	1011.0	COG0642@1|root,COG0745@1|root,COG3292@1|root,COG0745@2|Bacteria,COG2205@2|Bacteria,COG3292@2|Bacteria,4NDXU@976|Bacteroidetes,2FM2N@200643|Bacteroidia,3XJSU@558415|Marinilabiliaceae	976|Bacteroidetes	T	helix_turn_helix, arabinose operon control protein	-	-	-	-	-	-	-	-	-	-	-	-	HATPase_c,HTH_18,HisKA,Reg_prop,Response_reg,Y_Y_Y
BYD3_k127_325769_13	886377.Murru_1462	1.368e-37	147.0	COG0399@1|root,COG0399@2|Bacteria,4NVFZ@976|Bacteroidetes,1I3II@117743|Flavobacteriia	976|Bacteroidetes	M	ribosomal protein	-	-	-	-	-	-	-	-	-	-	-	-	23S_rRNA_IVP
BYD3_k127_325769_5	869213.JCM21142_93469	3.447e-114	375.0	COG1538@1|root,COG1538@2|Bacteria,4NGXM@976|Bacteroidetes,47KVY@768503|Cytophagia	976|Bacteroidetes	MU	PFAM Outer membrane efflux protein	-	-	-	-	-	-	-	-	-	-	-	-	OEP
BYD3_k127_325769_11	869213.JCM21142_93469	3.422e-51	187.0	COG1538@1|root,COG1538@2|Bacteria,4NGXM@976|Bacteroidetes,47KVY@768503|Cytophagia	976|Bacteroidetes	MU	PFAM Outer membrane efflux protein	-	-	-	-	-	-	-	-	-	-	-	-	OEP
BYD3_k127_325769_7	869213.JCM21142_93470	2.1e-87	303.0	COG1566@1|root,COG1566@2|Bacteria,4PP1F@976|Bacteroidetes,47YFE@768503|Cytophagia	976|Bacteroidetes	V	Barrel-sandwich domain of CusB or HlyD membrane-fusion	-	-	-	ko:K02005	-	-	-	-	ko00000	-	-	-	HlyD_3
BYD3_k127_325769_9	1408473.JHXO01000005_gene1487	1.399e-58	210.0	COG3142@1|root,COG3142@2|Bacteria,4NINY@976|Bacteroidetes,2FN71@200643|Bacteroidia	976|Bacteroidetes	P	Participates in the control of copper homeostasis	cutC	-	-	ko:K06201	-	-	-	-	ko00000	-	-	-	CutC
BYD3_k127_325769_3	869213.JCM21142_104365	8.877e-137	448.0	COG0285@1|root,COG0285@2|Bacteria,4NES8@976|Bacteroidetes,47K0F@768503|Cytophagia	976|Bacteroidetes	H	Belongs to the folylpolyglutamate synthase family	folC	-	6.3.2.12,6.3.2.17	ko:K11754	ko00790,ko01100,map00790,map01100	M00126,M00841	R00942,R02237,R04241	RC00064,RC00090,RC00162	ko00000,ko00001,ko00002,ko01000	-	-	-	Mur_ligase_M
BYD3_k127_325769_10	635013.TherJR_1090	1.172e-51	187.0	COG0778@1|root,COG0778@2|Bacteria,1V4DP@1239|Firmicutes,24HBZ@186801|Clostridia,262HG@186807|Peptococcaceae	186801|Clostridia	C	PFAM Nitroreductase	-	-	-	-	-	-	-	-	-	-	-	-	Nitroreductase
BYD3_k127_325769_2	1168289.AJKI01000031_gene1002	8.45e-185	588.0	COG1875@1|root,COG1875@2|Bacteria,4NDUI@976|Bacteroidetes,2FP3H@200643|Bacteroidia,3XJ4X@558415|Marinilabiliaceae	976|Bacteroidetes	T	PIN domain	ybeZ_1	-	-	ko:K07175	-	-	-	-	ko00000	-	-	-	PIN_4,PhoH
BYD3_k127_325769_12	1453500.AT05_05405	7.731e-38	147.0	COG2062@1|root,COG2062@2|Bacteria,4NQFM@976|Bacteroidetes,1I2V8@117743|Flavobacteriia	976|Bacteroidetes	T	phosphohistidine phosphatase	sixA	-	-	ko:K08296	-	-	-	-	ko00000,ko01000	-	-	-	His_Phos_1
BYD3_k127_325769_1	1094980.Mpsy_0382	2.555e-237	752.0	COG0855@1|root,arCOG04535@2157|Archaea,2XTCF@28890|Euryarchaeota,2N965@224756|Methanomicrobia	224756|Methanomicrobia	P	Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)	ppk	-	2.7.4.1	ko:K00937	ko00190,ko03018,map00190,map03018	-	-	-	ko00000,ko00001,ko01000,ko03019	-	-	-	PP_kinase,PP_kinase_C,PP_kinase_N
BYD3_k127_325769_6	385682.AFSL01000025_gene2093	3.684e-89	302.0	COG0483@1|root,COG0483@2|Bacteria,4NI6D@976|Bacteroidetes,2FNAK@200643|Bacteroidia,3XJ5Z@558415|Marinilabiliaceae	976|Bacteroidetes	G	Inositol monophosphatase family	suhB	-	3.1.3.25	ko:K01092	ko00521,ko00562,ko01100,ko04070,map00521,map00562,map01100,map04070	M00131	R01185,R01186,R01187	RC00078	ko00000,ko00001,ko00002,ko01000	-	-	-	Inositol_P
BYD3_k127_325769_8	1168034.FH5T_09905	1.087e-69	246.0	COG1560@1|root,COG1560@2|Bacteria,4NGQU@976|Bacteroidetes,2FPU3@200643|Bacteroidia	976|Bacteroidetes	M	Lipid A biosynthesis	waaM	-	2.3.1.241	ko:K02517	ko00540,ko01100,map00540,map01100	M00060	R05146	RC00037,RC00039	ko00000,ko00001,ko00002,ko01000,ko01005	-	-	-	Lip_A_acyltrans
BYD3_k127_325769_4	1408473.JHXO01000011_gene3010	3.772e-123	404.0	COG1216@1|root,COG1216@2|Bacteria,4NFP0@976|Bacteroidetes,2FN97@200643|Bacteroidia	976|Bacteroidetes	S	glycosyl transferase family 2	wbbL_1	-	-	ko:K07011	-	-	-	-	ko00000	-	-	-	Glycos_transf_2
BYD3_k127_325769_14	743722.Sph21_1686	2.991e-14	76.0	28V9W@1|root,2ZHCT@2|Bacteria,4NMQ0@976|Bacteroidetes,1IS10@117747|Sphingobacteriia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_3266715_6	234267.Acid_6078	2.547e-21	106.0	COG0823@1|root,COG0823@2|Bacteria	2|Bacteria	U	Involved in the tonB-independent uptake of proteins	-	-	-	-	-	-	-	-	-	-	-	-	Beta_helix,PD40,SdrD_B
BYD3_k127_3266715_0	335543.Sfum_1622	5.312e-149	495.0	COG1858@1|root,COG3391@1|root,COG1858@2|Bacteria,COG3391@2|Bacteria,1R7E0@1224|Proteobacteria,42XD8@68525|delta/epsilon subdivisions,2WT8U@28221|Deltaproteobacteria	28221|Deltaproteobacteria	C	TIGRFAM 40-residue YVTN family beta-propeller repeat	-	-	-	-	-	-	-	-	-	-	-	-	Cytochrom_C,Cytochrome_C554
BYD3_k127_3266715_4	234267.Acid_6081	5.383e-98	333.0	COG3292@1|root,COG3292@2|Bacteria	2|Bacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	Big_3_3,HATPase_c,PKD_3,Reg_prop
BYD3_k127_3266715_5	234267.Acid_3759	2.261e-50	185.0	COG0251@1|root,COG0251@2|Bacteria	2|Bacteria	J	oxidation-reduction process	rapK	GO:0003674,GO:0003824,GO:0016787,GO:0016801,GO:0016803	3.3.2.13,4.1.3.40,4.1.3.45	ko:K18239,ko:K18240	ko00130,ko00400,ko01100,ko01110,map00130,map00400,map01100,map01110	M00117	R01302,R10583,R10597	RC00350,RC00491,RC02148,RC03212	ko00000,ko00001,ko00002,ko01000	-	-	-	Ribonuc_L-PSP
BYD3_k127_3266715_2	335543.Sfum_1620	4.833e-118	393.0	COG0683@1|root,COG0683@2|Bacteria	2|Bacteria	E	ABC-type branched-chain amino acid transport systems, periplasmic component	-	-	-	ko:K01999	ko02010,ko02024,map02010,map02024	M00237	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.4	-	-	Peripla_BP_6
BYD3_k127_3266715_3	944480.ATUV01000001_gene1109	8.691e-106	350.0	COG2876@1|root,COG2876@2|Bacteria,1QVAD@1224|Proteobacteria,42MU4@68525|delta/epsilon subdivisions,2WJ8Y@28221|Deltaproteobacteria,2M6FY@213113|Desulfurellales	28221|Deltaproteobacteria	E	NeuB family	aroG-2	-	2.5.1.54,5.4.99.5	ko:K03856,ko:K04516	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	M00022,M00024,M00025	R01715,R01826	RC00435,RC03116	ko00000,ko00001,ko00002,ko01000	-	-	-	CM_2,DAHP_synth_1
BYD3_k127_3266715_7	525255.HMPREF0077_0147	2.673e-09	68.0	COG0683@1|root,COG0683@2|Bacteria,1TPQ2@1239|Firmicutes,248H1@186801|Clostridia,22GUB@1570339|Peptoniphilaceae	186801|Clostridia	M	Receptor family ligand-binding protein	braC	-	-	ko:K01999	ko02010,ko02024,map02010,map02024	M00237	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.4	-	-	Peripla_BP_6
BYD3_k127_3266715_1	861299.J421_4032	1.155e-124	425.0	COG0457@1|root,COG0457@2|Bacteria	861299.J421_4032|-	S	peptidyl-tyrosine sulfation	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_3303291_5	1168034.FH5T_03220	1.876e-98	336.0	COG1404@1|root,COG1404@2|Bacteria,4NEIJ@976|Bacteroidetes,2FNT5@200643|Bacteroidia	976|Bacteroidetes	O	Belongs to the peptidase S8 family	aprN	-	-	-	-	-	-	-	-	-	-	-	Peptidase_S8
BYD3_k127_3303291_3	1408473.JHXO01000006_gene1171	1.004e-123	409.0	COG1570@1|root,COG1570@2|Bacteria,4NE64@976|Bacteroidetes,2FMMA@200643|Bacteroidia	976|Bacteroidetes	L	Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides	xseA	-	3.1.11.6	ko:K03601	ko03430,map03430	-	-	-	ko00000,ko00001,ko01000,ko03400	-	-	-	Exonuc_VII_L,tRNA_anti_2
BYD3_k127_3303291_6	385682.AFSL01000095_gene822	2.312e-13	73.0	COG1722@1|root,COG1722@2|Bacteria,4NXJV@976|Bacteroidetes,2FVH6@200643|Bacteroidia,3XKF5@558415|Marinilabiliaceae	976|Bacteroidetes	L	Exonuclease VII small subunit	xseB	-	3.1.11.6	ko:K03602	ko03430,map03430	-	-	-	ko00000,ko00001,ko01000,ko03400	-	-	-	Exonuc_VII_S
BYD3_k127_3303291_1	880070.Cycma_3965	6.398e-148	479.0	COG1073@1|root,COG1073@2|Bacteria,4NG6A@976|Bacteroidetes,47MDZ@768503|Cytophagia	976|Bacteroidetes	S	alpha beta	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_3303291_0	1237149.C900_02757	2.199e-148	509.0	COG2199@1|root,COG2203@1|root,COG3292@1|root,COG2203@2|Bacteria,COG3292@2|Bacteria,COG3706@2|Bacteria,4NK8Q@976|Bacteroidetes,47KVN@768503|Cytophagia	976|Bacteroidetes	T	Two component regulator propeller	-	-	-	-	-	-	-	-	-	-	-	-	GAF_2,HATPase_c,HisKA_3,His_kinase,Reg_prop,Y_Y_Y
BYD3_k127_3303291_2	553178.CAPGI0001_1597	3.458e-129	430.0	COG0815@1|root,COG0815@2|Bacteria,4NG4X@976|Bacteroidetes,1HY5K@117743|Flavobacteriia,1EQX8@1016|Capnocytophaga	976|Bacteroidetes	M	apolipoprotein N-acyltransferase	lnt	-	-	ko:K03820	-	-	-	-	ko00000,ko01000	-	GT2	-	CN_hydrolase
BYD3_k127_3303291_4	335543.Sfum_4014	7.795e-108	357.0	COG0409@1|root,COG0409@2|Bacteria,1MU1F@1224|Proteobacteria,42M6R@68525|delta/epsilon subdivisions,2WJDQ@28221|Deltaproteobacteria,2MR11@213462|Syntrophobacterales	28221|Deltaproteobacteria	O	TIGRFAM hydrogenase expression formation protein HypD	hypD	-	-	ko:K04654	-	-	-	-	ko00000	-	-	iAF987.Gmet_0117	HypD
BYD3_k127_332746_4	926556.Echvi_3040	2.28e-52	195.0	COG0739@1|root,COG0739@2|Bacteria,4NGHH@976|Bacteroidetes,47NA5@768503|Cytophagia	976|Bacteroidetes	M	PFAM Peptidase family M23	-	-	-	-	-	-	-	-	-	-	-	-	Peptidase_M23
BYD3_k127_332746_1	1408473.JHXO01000011_gene3040	6.114e-121	396.0	COG0739@1|root,COG0739@2|Bacteria,4NGHH@976|Bacteroidetes,2FME3@200643|Bacteroidia	976|Bacteroidetes	M	Peptidase, M23	-	-	-	-	-	-	-	-	-	-	-	-	Peptidase_M23
BYD3_k127_332746_5	385682.AFSL01000002_gene1872	1.487e-48	175.0	COG0789@1|root,COG0789@2|Bacteria,4NSBD@976|Bacteroidetes,2FTI6@200643|Bacteroidia,3XK3K@558415|Marinilabiliaceae	976|Bacteroidetes	K	helix_turn_helix, mercury resistance	ycgE	-	-	-	-	-	-	-	-	-	-	-	MerR_1
BYD3_k127_332746_0	1168034.FH5T_05640	1.776e-133	434.0	COG0327@1|root,COG0327@2|Bacteria,4NF51@976|Bacteroidetes,2FMW2@200643|Bacteroidia	976|Bacteroidetes	S	Belongs to the GTP cyclohydrolase I type 2 NIF3 family	yqfO	-	-	-	-	-	-	-	-	-	-	-	NIF3
BYD3_k127_332746_2	1408473.JHXO01000011_gene3037	2.954e-91	307.0	COG1579@1|root,COG1579@2|Bacteria,4NE36@976|Bacteroidetes,2FPGP@200643|Bacteroidia	976|Bacteroidetes	S	Zinc ribbon domain protein	-	-	-	ko:K07164	-	-	-	-	ko00000	-	-	-	zf-RING_7
BYD3_k127_332746_7	1346330.M472_13065	3.092e-07	61.0	COG3637@1|root,COG3637@2|Bacteria,4NNPF@976|Bacteroidetes,1ISTC@117747|Sphingobacteriia	976|Bacteroidetes	M	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety	-	-	-	-	-	-	-	-	-	-	-	-	OMP_b-brl
BYD3_k127_332746_6	927658.AJUM01000037_gene2430	8.696e-31	130.0	COG3637@1|root,COG3637@2|Bacteria,4NF6B@976|Bacteroidetes,2FQWF@200643|Bacteroidia,3XIRR@558415|Marinilabiliaceae	976|Bacteroidetes	M	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety	-	-	-	-	-	-	-	-	-	-	-	-	OMP_b-brl
BYD3_k127_332746_3	1168289.AJKI01000031_gene956	1.555e-71	246.0	COG0020@1|root,COG0020@2|Bacteria,4NF2B@976|Bacteroidetes,2FMM4@200643|Bacteroidia,3XJWZ@558415|Marinilabiliaceae	976|Bacteroidetes	I	Putative undecaprenyl diphosphate synthase	uppS	GO:0002094,GO:0003674,GO:0003824,GO:0004659,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006066,GO:0006629,GO:0006720,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0009058,GO:0009987,GO:0016093,GO:0016094,GO:0016740,GO:0016765,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046165,GO:0071704,GO:1901576,GO:1901615,GO:1901617	2.5.1.31	ko:K00806	ko00900,ko01110,map00900,map01110	-	R06447	RC00279,RC02839	ko00000,ko00001,ko01000,ko01006	-	-	-	Prenyltransf
BYD3_k127_3331442_1	1288963.ADIS_3213	0.0	1139.0	COG1048@1|root,COG1048@2|Bacteria,4NDZT@976|Bacteroidetes,47KF9@768503|Cytophagia	976|Bacteroidetes	C	aconitate hydratase	acnA	-	4.2.1.3	ko:K01681	ko00020,ko00630,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01210,ko01230,map00020,map00630,map00720,map01100,map01110,map01120,map01130,map01200,map01210,map01230	M00009,M00010,M00012,M00173,M00740	R01324,R01325,R01900	RC00497,RC00498,RC00618	br01601,ko00000,ko00001,ko00002,ko01000	-	-	-	Aconitase,Aconitase_C
BYD3_k127_3331442_6	1270193.JARP01000002_gene373	1.203e-111	385.0	COG0744@1|root,COG0744@2|Bacteria,4NF58@976|Bacteroidetes,1IGEK@117743|Flavobacteriia,2NSZK@237|Flavobacterium	976|Bacteroidetes	M	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors	pbpF	-	-	-	-	-	-	-	-	-	-	-	Transgly
BYD3_k127_3331442_13	641143.HMPREF9331_00552	1.991e-06	59.0	COG3209@1|root,COG3209@2|Bacteria,4PHY2@976|Bacteroidetes,1IDNE@117743|Flavobacteriia,1EQ7G@1016|Capnocytophaga	976|Bacteroidetes	M	COG3209 Rhs family protein	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_3331442_8	927658.AJUM01000042_gene1505	6.963e-81	273.0	COG0009@1|root,COG0009@2|Bacteria,4NDZR@976|Bacteroidetes,2FP9A@200643|Bacteroidia,3XJ2S@558415|Marinilabiliaceae	976|Bacteroidetes	J	Telomere recombination	yciO	-	-	-	-	-	-	-	-	-	-	-	Sua5_yciO_yrdC
BYD3_k127_3331442_10	929713.NIASO_13375	2.778e-55	211.0	COG0658@1|root,COG0658@2|Bacteria,4NEJH@976|Bacteroidetes,1IQH4@117747|Sphingobacteriia	976|Bacteroidetes	S	TIGRFAM ComEC Rec2-related protein	comEC	-	-	ko:K02238	-	M00429	-	-	ko00000,ko00002,ko02044	3.A.11.1,3.A.11.2	-	-	Competence,DUF4131
BYD3_k127_3331442_14	1121097.JCM15093_2004	2.168e-05	55.0	COG0658@1|root,COG0658@2|Bacteria,4NEJH@976|Bacteroidetes,2FPT6@200643|Bacteroidia,4AM2E@815|Bacteroidaceae	976|Bacteroidetes	S	Psort location CytoplasmicMembrane, score 10.00	comEC	-	-	ko:K02238	-	M00429	-	-	ko00000,ko00002,ko02044	3.A.11.1,3.A.11.2	-	-	Competence,DUF4131
BYD3_k127_3331442_5	1168034.FH5T_12270	9.324e-125	407.0	COG0167@1|root,COG0167@2|Bacteria,4NJVM@976|Bacteroidetes,2FR3A@200643|Bacteroidia	976|Bacteroidetes	F	Dihydroorotate dehydrogenase	-	-	1.3.98.1	ko:K00226	ko00240,ko01100,map00240,map01100	M00051	R01867	RC00051	ko00000,ko00001,ko00002,ko01000	-	-	-	DHO_dh
BYD3_k127_3331442_9	886379.AEWI01000043_gene3297	1.326e-60	214.0	COG0242@1|root,COG0242@2|Bacteria,4NFB4@976|Bacteroidetes,2FNEJ@200643|Bacteroidia,3XJJN@558415|Marinilabiliaceae	976|Bacteroidetes	J	Polypeptide deformylase	def	GO:0003674,GO:0003824,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016787,GO:0016810,GO:0016811,GO:0018193,GO:0018206,GO:0019538,GO:0031365,GO:0036211,GO:0042586,GO:0043170,GO:0043412,GO:0043686,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0071704,GO:1901564	3.5.1.88	ko:K01462	-	-	-	-	ko00000,ko01000	-	-	-	Pep_deformylase
BYD3_k127_3331442_11	547042.BACCOPRO_00464	3.812e-49	179.0	COG0816@1|root,COG0816@2|Bacteria,4NQ8B@976|Bacteroidetes,2FT2Q@200643|Bacteroidia,4AQK2@815|Bacteroidaceae	976|Bacteroidetes	L	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA	ruvX	GO:0000966,GO:0000967,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0022613,GO:0034470,GO:0034471,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:1901360	-	ko:K07447	-	-	-	-	ko00000,ko01000	-	-	-	RuvX
BYD3_k127_3331442_0	385682.AFSL01000065_gene1629	0.0	1815.0	COG0674@1|root,COG1013@1|root,COG1014@1|root,COG1143@1|root,COG0674@2|Bacteria,COG1013@2|Bacteria,COG1014@2|Bacteria,COG1143@2|Bacteria,4NF4F@976|Bacteroidetes,2FKZU@200643|Bacteroidia,3XJQ5@558415|Marinilabiliaceae	976|Bacteroidetes	C	Domain of unknown function	nifJ	-	1.2.7.1	ko:K03737	ko00010,ko00020,ko00620,ko00650,ko00720,ko01100,ko01120,ko01130,ko01200,map00010,map00020,map00620,map00650,map00720,map01100,map01120,map01130,map01200	M00173,M00307	R01196,R10866	RC00004,RC02742	br01601,ko00000,ko00001,ko00002,ko01000	-	-	-	EKR,Fer4_16,Fer4_7,PFOR_II,POR,POR_N,TPP_enzyme_C
BYD3_k127_3331442_3	1121098.HMPREF1534_00889	3.736e-196	630.0	COG1158@1|root,COG1158@2|Bacteria,4NEFP@976|Bacteroidetes,2FN7R@200643|Bacteroidia,4AKXW@815|Bacteroidaceae	976|Bacteroidetes	K	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template	rho	-	-	ko:K03628	ko03018,map03018	-	-	-	ko00000,ko00001,ko03019,ko03021	-	-	-	ATP-synt_ab,Rho_N,Rho_RNA_bind
BYD3_k127_3331442_4	927658.AJUM01000042_gene1460	8.362e-132	425.0	COG0568@1|root,COG0568@2|Bacteria,4NEBF@976|Bacteroidetes,2FWAQ@200643|Bacteroidia,3XJHZ@558415|Marinilabiliaceae	976|Bacteroidetes	K	Sigma-70 region 3	rpoD	-	-	ko:K03086	-	-	-	-	ko00000,ko03021	-	-	-	Sigma70_r1_2,Sigma70_r2,Sigma70_r3,Sigma70_r4
BYD3_k127_3331442_7	385682.AFSL01000065_gene1625	1.523e-84	285.0	COG0036@1|root,COG0036@2|Bacteria,4NDXB@976|Bacteroidetes,2FM7Z@200643|Bacteroidia,3XIXR@558415|Marinilabiliaceae	976|Bacteroidetes	G	Ribulose-phosphate 3 epimerase family	rpe	-	5.1.3.1	ko:K01783	ko00030,ko00040,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00040,map00710,map01100,map01110,map01120,map01130,map01200,map01230	M00004,M00007	R01529	RC00540	ko00000,ko00001,ko00002,ko01000	-	-	-	Ribul_P_3_epim
BYD3_k127_3331442_12	385682.AFSL01000024_gene2042	7.806e-17	88.0	28P8J@1|root,2ZC2G@2|Bacteria,4NTQZ@976|Bacteroidetes,2FZN7@200643|Bacteroidia,3XK1X@558415|Marinilabiliaceae	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_3331442_2	886379.AEWI01000001_gene1808	1.058e-215	675.0	COG0362@1|root,COG0362@2|Bacteria,4NG05@976|Bacteroidetes,2FMFW@200643|Bacteroidia,3XIPB@558415|Marinilabiliaceae	976|Bacteroidetes	G	6-phosphogluconate dehydrogenase, C-terminal domain	gnd	-	1.1.1.343,1.1.1.44	ko:K00033	ko00030,ko00480,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map00480,map01100,map01110,map01120,map01130,map01200	M00004,M00006	R01528,R10221	RC00001,RC00539	ko00000,ko00001,ko00002,ko01000	-	-	-	6PGD,NAD_binding_2
BYD3_k127_3334129_6	468059.AUHA01000002_gene555	3.539e-12	69.0	293VW@1|root,2ZRB2@2|Bacteria,4NMK7@976|Bacteroidetes,1ISN4@117747|Sphingobacteriia	976|Bacteroidetes	S	TIGRFAM gliding motility-associated lipoprotein GldD	gldD	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_3334129_1	886379.AEWI01000002_gene503	2.336e-135	444.0	COG1253@1|root,COG1253@2|Bacteria,4NDZ7@976|Bacteroidetes,2FMEZ@200643|Bacteroidia,3XJFC@558415|Marinilabiliaceae	976|Bacteroidetes	S	Transporter associated domain	gldE	-	-	-	-	-	-	-	-	-	-	-	CBS,CorC_HlyC,DUF21
BYD3_k127_3334129_4	1168034.FH5T_14055	5.22e-49	179.0	COG0629@1|root,COG0629@2|Bacteria,4NQBK@976|Bacteroidetes,2FT5G@200643|Bacteroidia	976|Bacteroidetes	L	Single-stranded DNA-binding protein	ssb	-	-	ko:K03111	ko03030,ko03430,ko03440,map03030,map03430,map03440	-	-	-	ko00000,ko00001,ko03029,ko03032,ko03400	-	-	-	SSB
BYD3_k127_3334129_2	1349822.NSB1T_13445	7.621e-112	372.0	COG1194@1|root,COG1194@2|Bacteria,4NDZY@976|Bacteroidetes,2FNMQ@200643|Bacteroidia,22WUP@171551|Porphyromonadaceae	976|Bacteroidetes	L	A G-specific adenine glycosylase	mutY	-	-	ko:K03575	ko03410,map03410	-	-	-	ko00000,ko00001,ko01000,ko03400	-	-	-	EndIII_4Fe-2S,HhH-GPD,NUDIX_4
BYD3_k127_3334129_5	1168034.FH5T_14065	2.657e-44	162.0	COG0776@1|root,COG0776@2|Bacteria,4NT0D@976|Bacteroidetes,2FTUV@200643|Bacteroidia	976|Bacteroidetes	L	Belongs to the bacterial histone-like protein family	hupA	-	-	ko:K03530	-	-	-	-	ko00000,ko03032,ko03036,ko03400	-	-	-	Bac_DNA_binding
BYD3_k127_3334129_7	714943.Mucpa_2551	1.286e-06	50.0	2EIUI@1|root,33CJV@2|Bacteria,4NYR6@976|Bacteroidetes	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_3334129_0	869213.JCM21142_93417	2.433e-209	662.0	COG1530@1|root,COG1530@2|Bacteria,4NED1@976|Bacteroidetes,47KC6@768503|Cytophagia	976|Bacteroidetes	J	ribonuclease, Rne Rng family	rng	-	-	ko:K08301	-	-	-	-	ko00000,ko01000,ko03009,ko03019	-	-	-	RNase_E_G,S1
BYD3_k127_3334129_3	411477.PARMER_01991	3.284e-64	229.0	COG4299@1|root,COG4299@2|Bacteria,4NGKU@976|Bacteroidetes,2FNH7@200643|Bacteroidia,22WI6@171551|Porphyromonadaceae	976|Bacteroidetes	S	COGs COG4299 conserved	-	-	-	-	-	-	-	-	-	-	-	-	DUF5009
BYD3_k127_3348179_1	340177.Cag_1581	2.601e-111	366.0	COG0598@1|root,COG0598@2|Bacteria,1FEBZ@1090|Chlorobi	1090|Chlorobi	P	Mediates influx of magnesium ions	corA	-	-	ko:K03284,ko:K16074	-	-	-	-	ko00000,ko02000	1.A.35.1,1.A.35.3,1.A.35.4	-	-	CorA
BYD3_k127_3348179_3	1408473.JHXO01000012_gene329	1.488e-62	218.0	COG0454@1|root,COG0456@2|Bacteria,4NNG9@976|Bacteroidetes,2FTBE@200643|Bacteroidia	976|Bacteroidetes	K	Acetyltransferase (GNAT) domain	-	-	-	ko:K03828	-	-	-	-	ko00000,ko01000	-	-	-	Acetyltransf_1
BYD3_k127_3348179_5	1121904.ARBP01000005_gene4597	1.65e-22	112.0	2DBNY@1|root,2ZA6F@2|Bacteria,4NH2P@976|Bacteroidetes,47X5R@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_3348179_0	927658.AJUM01000034_gene364	0.0	1204.0	COG2605@1|root,COG2605@2|Bacteria,4NHF2@976|Bacteroidetes,2FMWG@200643|Bacteroidia,3XKQU@558415|Marinilabiliaceae	976|Bacteroidetes	S	L-fucokinase	fkp	-	-	-	-	-	-	-	-	-	-	-	Fucokinase,GHMP_kinases_C,GHMP_kinases_N
BYD3_k127_3348179_4	938709.AUSH02000073_gene1816	1.164e-40	158.0	COG0084@1|root,COG0084@2|Bacteria,4NSGW@976|Bacteroidetes	976|Bacteroidetes	L	hydrolase, TatD	-	-	-	ko:K03424	-	-	-	-	ko00000,ko01000	-	-	-	TatD_DNase
BYD3_k127_3348179_2	1121129.KB903359_gene2275	7.883e-83	281.0	COG1179@1|root,COG1179@2|Bacteria,4NEKB@976|Bacteroidetes,2FMG4@200643|Bacteroidia,22XGU@171551|Porphyromonadaceae	976|Bacteroidetes	H	COGs COG1179 Dinucleotide-utilizing protein involved in molybdopterin and thiamine biosynthesis family 1	hypB	-	-	ko:K22132	-	-	-	-	ko00000,ko03016	-	-	-	ThiF
BYD3_k127_338993_0	517417.Cpar_1802	2.149e-154	494.0	COG0451@1|root,COG0451@2|Bacteria,1FDWT@1090|Chlorobi	1090|Chlorobi	M	short-chain dehydrogenase reductase SDR	-	-	5.1.3.6	ko:K08679	ko00520,ko01100,map00520,map01100	-	R01385	RC00289	ko00000,ko00001,ko01000	-	-	-	Epimerase
BYD3_k127_338993_1	1150600.ADIARSV_2701	1.319e-107	361.0	2C95T@1|root,2Z7NG@2|Bacteria,4NGVW@976|Bacteroidetes,1ITN3@117747|Sphingobacteriia	976|Bacteroidetes	S	Capsule assembly protein Wzi	-	-	-	-	-	-	-	-	-	-	-	-	Caps_assemb_Wzi
BYD3_k127_342022_7	314287.GB2207_09826	3.065e-23	100.0	28HKI@1|root,2Z7VC@2|Bacteria,1MW0I@1224|Proteobacteria,1RQ5H@1236|Gammaproteobacteria	1236|Gammaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_342022_5	588581.Cpap_0393	3.313e-67	239.0	COG2017@1|root,COG2017@2|Bacteria,1V23E@1239|Firmicutes,24MJ0@186801|Clostridia	186801|Clostridia	G	converts alpha-aldose to the beta-anomer	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_342022_4	313603.FB2170_09206	2.878e-156	510.0	COG0477@1|root,COG2814@2|Bacteria,4NE09@976|Bacteroidetes,1HY74@117743|Flavobacteriia	976|Bacteroidetes	EGP	Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family	-	-	-	-	-	-	-	-	-	-	-	-	Sugar_tr
BYD3_k127_342022_3	1168289.AJKI01000016_gene1948	4.166e-184	585.0	COG2211@1|root,COG2211@2|Bacteria,4NE3B@976|Bacteroidetes,2FPMF@200643|Bacteroidia,3XIS3@558415|Marinilabiliaceae	976|Bacteroidetes	G	MFS/sugar transport protein	-	-	-	-	-	-	-	-	-	-	-	-	MFS_2
BYD3_k127_342022_1	1121904.ARBP01000011_gene1496	8.259e-308	963.0	COG0726@1|root,COG0726@2|Bacteria,4PMVX@976|Bacteroidetes,47NMS@768503|Cytophagia	976|Bacteroidetes	G	Cellulase N-terminal ig-like domain	-	-	-	-	-	-	-	-	-	-	-	-	CelD_N,Glyco_hydro_9
BYD3_k127_342022_0	1408473.JHXO01000006_gene1236	0.0	1070.0	COG1472@1|root,COG1472@2|Bacteria,4NE90@976|Bacteroidetes,2FPEP@200643|Bacteroidia	976|Bacteroidetes	G	Glycosyl hydrolase family 3 C-terminal domain	-	-	3.2.1.21	ko:K05349	ko00460,ko00500,ko00940,ko01100,ko01110,map00460,map00500,map00940,map01100,map01110	-	R00026,R02558,R02887,R02985,R03527,R04949,R04998,R10035,R10039,R10040	RC00049,RC00059,RC00171,RC00262,RC00397,RC00451,RC00714,RC00746,RC01248	ko00000,ko00001,ko01000	-	GH3	-	Glyco_hydro_3,Glyco_hydro_3_C
BYD3_k127_342022_2	1167006.UWK_00931	8.942e-187	597.0	COG0578@1|root,COG0578@2|Bacteria,1MUMY@1224|Proteobacteria,42N1B@68525|delta/epsilon subdivisions,2WJWS@28221|Deltaproteobacteria,2MHMQ@213118|Desulfobacterales	28221|Deltaproteobacteria	C	PFAM FAD dependent oxidoreductase	glpD	-	1.1.5.3	ko:K00111	ko00564,ko01110,map00564,map01110	-	R00848	RC00029	ko00000,ko00001,ko01000	-	-	-	DAO,DAO_C
BYD3_k127_3427056_3	391596.PBAL39_00982	3.887e-28	116.0	COG1912@1|root,COG1912@2|Bacteria,4NG9Y@976|Bacteroidetes,1IVPQ@117747|Sphingobacteriia	976|Bacteroidetes	S	S-adenosyl-l-methionine hydroxide adenosyltransferase	fjo14	-	-	-	-	-	-	-	-	-	-	-	SAM_adeno_trans
BYD3_k127_3427056_2	1408473.JHXO01000007_gene860	1.708e-118	389.0	COG1702@1|root,COG1702@2|Bacteria,4NDYV@976|Bacteroidetes,2FMIF@200643|Bacteroidia	976|Bacteroidetes	T	PhoH family	phoH	-	-	ko:K06217	-	-	-	-	ko00000	-	-	-	PhoH
BYD3_k127_3427056_1	385682.AFSL01000076_gene1012	1.681e-156	498.0	COG0152@1|root,COG0152@2|Bacteria,4NF1Z@976|Bacteroidetes,2FPKZ@200643|Bacteroidia,3XIN0@558415|Marinilabiliaceae	976|Bacteroidetes	F	SAICAR synthetase	purC	GO:0003674,GO:0003824,GO:0004639,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006163,GO:0006164,GO:0006188,GO:0006189,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0016881,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046040,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576	6.3.2.6	ko:K01923	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	M00048	R04591	RC00064,RC00162	ko00000,ko00001,ko00002,ko01000	-	-	-	SAICAR_synt
BYD3_k127_3427056_0	385682.AFSL01000065_gene1686	4.55e-157	501.0	COG1501@1|root,COG1501@2|Bacteria,4NE1H@976|Bacteroidetes,2FM4Z@200643|Bacteroidia,3XIU0@558415|Marinilabiliaceae	976|Bacteroidetes	G	Domain of unknown function (DUF5110)	-	GO:0000272,GO:0003674,GO:0003824,GO:0004553,GO:0005975,GO:0005976,GO:0006073,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009251,GO:0009987,GO:0010383,GO:0010410,GO:0010411,GO:0016052,GO:0016787,GO:0016798,GO:0043170,GO:0044036,GO:0044042,GO:0044237,GO:0044238,GO:0044260,GO:0044262,GO:0044264,GO:0044403,GO:0044419,GO:0051704,GO:0071554,GO:0071704,GO:0085030,GO:1901575,GO:2000895,GO:2000899	3.2.1.177	ko:K01811	-	-	-	-	ko00000,ko01000	-	GH31	-	DUF4968,DUF5110,Gal_mutarotas_2,Glyco_hydro_31,PA14
BYD3_k127_3459474_1	869213.JCM21142_31212	2.807e-58	204.0	COG0173@1|root,COG0173@2|Bacteria,4NECY@976|Bacteroidetes,47JC8@768503|Cytophagia	976|Bacteroidetes	J	Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp)	aspS	-	6.1.1.12	ko:K01876	ko00970,map00970	M00359,M00360	R05577	RC00055,RC00523	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029	-	-	-	GAD,tRNA-synt_2,tRNA_anti-codon
BYD3_k127_3459474_0	385682.AFSL01000079_gene1034	1.155e-304	942.0	COG0481@1|root,COG0481@2|Bacteria,4NEJ9@976|Bacteroidetes,2FM9V@200643|Bacteroidia,3XJ8J@558415|Marinilabiliaceae	976|Bacteroidetes	M	GTP-binding protein LepA C-terminus	lepA	-	-	ko:K03596	ko05134,map05134	-	-	-	ko00000,ko00001	-	-	-	EFG_C,GTP_EFTU,GTP_EFTU_D2,LepA_C
BYD3_k127_3459474_2	1121097.JCM15093_465	3.82e-43	163.0	COG0454@1|root,COG0456@2|Bacteria,4NTGT@976|Bacteroidetes,2FUEM@200643|Bacteroidia	976|Bacteroidetes	K	Acetyltransferase (GNAT) domain	-	-	-	-	-	-	-	-	-	-	-	-	Acetyltransf_1
BYD3_k127_3459474_3	867900.Celly_1167	1.653e-05	53.0	COG0577@1|root,COG0577@2|Bacteria,4NDUK@976|Bacteroidetes,1HX0V@117743|Flavobacteriia	976|Bacteroidetes	V	COG0577 ABC-type antimicrobial peptide transport system permease component	-	-	-	ko:K02004	-	M00258	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	FtsX,MacB_PCD
BYD3_k127_3481750_0	1237149.C900_04089	9.023e-151	490.0	COG2204@1|root,COG2204@2|Bacteria,4NE89@976|Bacteroidetes,47JF9@768503|Cytophagia	976|Bacteroidetes	T	two component, sigma54 specific, transcriptional regulator, Fis family	-	-	-	-	-	-	-	-	-	-	-	-	HTH_8,Response_reg,Sigma54_activat
BYD3_k127_3481750_1	1237149.C900_03059	5.793e-146	491.0	COG0577@1|root,COG0577@2|Bacteria,4NDUK@976|Bacteroidetes,47JJN@768503|Cytophagia	976|Bacteroidetes	V	FtsX-like permease family	-	-	-	ko:K02004	-	M00258	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	FtsX,MacB_PCD
BYD3_k127_3481750_4	929562.Emtol_2535	2.807e-60	218.0	COG3595@1|root,COG3595@2|Bacteria,4NGRU@976|Bacteroidetes,47MSM@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	DUF4097
BYD3_k127_3481750_2	1123277.KB893172_gene532	3.38e-90	305.0	COG3595@1|root,COG3595@2|Bacteria,4NJBA@976|Bacteroidetes,47MRP@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_3481750_3	1123277.KB893172_gene533	3.297e-67	237.0	COG1413@1|root,COG1413@2|Bacteria,4NIBA@976|Bacteroidetes,47M5K@768503|Cytophagia	976|Bacteroidetes	C	HEAT repeats	-	-	-	-	-	-	-	-	-	-	-	-	HEAT_2,zf-HC2
BYD3_k127_3481750_5	1123277.KB893172_gene534	5.763e-19	89.0	COG1595@1|root,COG1595@2|Bacteria,4NMYQ@976|Bacteroidetes,47PII@768503|Cytophagia	976|Bacteroidetes	K	TIGRFAM RNA polymerase sigma factor, sigma-70 family	-	-	-	ko:K03088	-	-	-	-	ko00000,ko03021	-	-	-	Sigma70_r2,Sigma70_r4_2
BYD3_k127_3522145_10	1121094.KB894643_gene1776	2.379e-14	76.0	COG0653@1|root,COG0653@2|Bacteria,4NF7C@976|Bacteroidetes,2FMVF@200643|Bacteroidia,4AMYA@815|Bacteroidaceae	976|Bacteroidetes	U	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane	secA	GO:0000166,GO:0003674,GO:0003824,GO:0005215,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005887,GO:0006810,GO:0008104,GO:0008144,GO:0008150,GO:0008320,GO:0008565,GO:0015031,GO:0015399,GO:0015405,GO:0015440,GO:0015450,GO:0015462,GO:0015833,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0022804,GO:0022857,GO:0022884,GO:0030554,GO:0031224,GO:0031226,GO:0031522,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0033036,GO:0033220,GO:0035639,GO:0036094,GO:0042623,GO:0042626,GO:0042886,GO:0042887,GO:0043167,GO:0043168,GO:0043492,GO:0043952,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0045184,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071806,GO:0071944,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:1904680	-	ko:K03070	ko02024,ko03060,ko03070,map02024,map03060,map03070	M00335	-	-	ko00000,ko00001,ko00002,ko02044	3.A.5.1,3.A.5.10,3.A.5.2,3.A.5.4	-	-	Helicase_C,SEC-C,SecA_DEAD,SecA_PP_bind,SecA_SW
BYD3_k127_3522145_0	1121957.ATVL01000008_gene4558	5.165e-193	610.0	COG0538@1|root,COG0538@2|Bacteria,4PKW6@976|Bacteroidetes,47NMD@768503|Cytophagia	976|Bacteroidetes	C	Isocitrate/isopropylmalate dehydrogenase	icd	-	1.1.1.42	ko:K00031	ko00020,ko00480,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01210,ko01230,ko04146,map00020,map00480,map00720,map01100,map01110,map01120,map01130,map01200,map01210,map01230,map04146	M00009,M00010,M00173,M00740	R00267,R00268,R01899	RC00001,RC00084,RC00114,RC00626,RC02801	br01601,ko00000,ko00001,ko00002,ko01000	-	-	-	Iso_dh
BYD3_k127_3522145_2	468059.AUHA01000002_gene108	4.322e-167	543.0	COG2812@1|root,COG2812@2|Bacteria,4NE8A@976|Bacteroidetes,1IQ35@117747|Sphingobacteriia	976|Bacteroidetes	L	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity	dnaX	-	2.7.7.7	ko:K02343	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	M00260	R00375,R00376,R00377,R00378	RC02795	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	-	-	-	DNA_pol3_delta2,DNA_pol3_gamma3
BYD3_k127_3522145_9	1250232.JQNJ01000001_gene2541	4.451e-20	101.0	COG3595@1|root,COG3595@2|Bacteria,4NEUW@976|Bacteroidetes,1HYD6@117743|Flavobacteriia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_3522145_5	1185876.BN8_05619	4.446e-52	189.0	COG1595@1|root,COG1595@2|Bacteria,4NMAK@976|Bacteroidetes,47P7T@768503|Cytophagia	976|Bacteroidetes	K	TIGRFAM RNA polymerase sigma factor, sigma-70 family	-	-	-	ko:K03088	-	-	-	-	ko00000,ko03021	-	-	-	Sigma70_r2,Sigma70_r4_2
BYD3_k127_3522145_8	1120965.AUBV01000007_gene2538	6.549e-31	130.0	COG2340@1|root,COG2340@2|Bacteria,4NVRQ@976|Bacteroidetes,47SIP@768503|Cytophagia	976|Bacteroidetes	S	Cysteine-rich secretory protein family	-	-	-	-	-	-	-	-	-	-	-	-	CAP
BYD3_k127_3522145_12	1499967.BAYZ01000069_gene1917	6.92e-07	62.0	COG2204@1|root,COG2204@2|Bacteria	2|Bacteria	T	phosphorelay signal transduction system	-	-	-	-	-	-	-	-	-	-	-	-	Response_reg
BYD3_k127_3522145_7	1121904.ARBP01000037_gene2034	3.092e-42	173.0	COG2202@1|root,COG4585@1|root,COG2202@2|Bacteria,COG4585@2|Bacteria,4NI65@976|Bacteroidetes	976|Bacteroidetes	T	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase	-	-	-	-	-	-	-	-	-	-	-	-	HATPase_c,HisKA_3,TPR_12,TPR_8
BYD3_k127_3522145_4	742725.HMPREF9450_01085	1.641e-55	201.0	COG2197@1|root,COG2197@2|Bacteria,4NKAD@976|Bacteroidetes,2FSDF@200643|Bacteroidia,22UCQ@171550|Rikenellaceae	976|Bacteroidetes	KT	helix_turn_helix, Lux Regulon	-	-	-	-	-	-	-	-	-	-	-	-	GerE,Response_reg
BYD3_k127_3522145_6	1168034.FH5T_18990	2.892e-47	175.0	COG2839@1|root,COG2839@2|Bacteria,4NNIY@976|Bacteroidetes,2FS52@200643|Bacteroidia	976|Bacteroidetes	S	Psort location CytoplasmicMembrane, score	-	-	-	ko:K09793	-	-	-	-	ko00000	-	-	-	DUF456
BYD3_k127_3522145_1	1408473.JHXO01000004_gene100	2.179e-176	557.0	COG0078@1|root,COG0078@2|Bacteria,4NEYX@976|Bacteroidetes,2FPNE@200643|Bacteroidia	976|Bacteroidetes	E	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline	-	-	2.1.3.3	ko:K00611	ko00220,ko01100,ko01110,ko01130,ko01230,map00220,map01100,map01110,map01130,map01230	M00029,M00844	R01398	RC00096	ko00000,ko00001,ko00002,ko01000	-	-	-	OTCace,OTCace_N
BYD3_k127_3522145_3	1124780.ANNU01000059_gene854	8.308e-82	295.0	COG4775@1|root,COG4775@2|Bacteria,4NF38@976|Bacteroidetes,47KMS@768503|Cytophagia	976|Bacteroidetes	M	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_352420_2	1123277.KB893187_gene2738	1.181e-05	59.0	COG3291@1|root,COG3291@2|Bacteria,4NJYT@976|Bacteroidetes,47M4T@768503|Cytophagia	976|Bacteroidetes	G	C-terminal domain of CHU protein family	-	-	-	-	-	-	-	-	-	-	-	-	CHU_C,PKD
BYD3_k127_352420_1	1237149.C900_03432	1.153e-49	201.0	COG3291@1|root,COG3291@2|Bacteria,4NJU9@976|Bacteroidetes,47NEJ@768503|Cytophagia	976|Bacteroidetes	Q	cell adhesion involved in biofilm formation	-	-	-	-	-	-	-	-	-	-	-	-	Big_5,PKD
BYD3_k127_352420_0	313606.M23134_08413	1.223e-51	210.0	COG3291@1|root,COG3405@1|root,COG4625@1|root,COG3291@2|Bacteria,COG3405@2|Bacteria,COG4625@2|Bacteria,4NJU9@976|Bacteroidetes,47NEJ@768503|Cytophagia	976|Bacteroidetes	Q	cell adhesion involved in biofilm formation	-	-	-	-	-	-	-	-	-	-	-	-	Big_5,PKD
BYD3_k127_3670711_2	1408473.JHXO01000004_gene92	6.004e-199	641.0	COG0553@1|root,COG0553@2|Bacteria,4NG6P@976|Bacteroidetes,2FPNU@200643|Bacteroidia	976|Bacteroidetes	L	SNF2 family N-terminal domain	-	-	2.7.11.1	ko:K08282	-	-	-	-	ko00000,ko01000	-	-	-	Helicase_C,SNF2_N
BYD3_k127_3670711_1	1168034.FH5T_05710	5.553e-204	644.0	COG0617@1|root,COG0617@2|Bacteria,4NF1S@976|Bacteroidetes,2FNMZ@200643|Bacteroidia	976|Bacteroidetes	J	tRNA nucleotidyltransferase poly(A) polymerase	cca	-	2.7.7.19,2.7.7.72	ko:K00970,ko:K00974	ko03013,ko03018,map03013,map03018	-	R09382,R09383,R09384,R09386	RC00078	ko00000,ko00001,ko01000,ko03016,ko03019	-	-	-	HD,PolyA_pol,PolyA_pol_RNAbd
BYD3_k127_3670711_0	1239962.C943_02379	5.471e-223	716.0	COG4772@1|root,COG4772@2|Bacteria,4PKTE@976|Bacteroidetes,47KHE@768503|Cytophagia	976|Bacteroidetes	P	PFAM TonB-dependent Receptor Plug Domain	-	-	-	ko:K02014	-	-	-	-	ko00000,ko02000	1.B.14	-	-	CarbopepD_reg_2,Plug,TonB_dep_Rec
BYD3_k127_3672900_2	694427.Palpr_2006	4.178e-141	452.0	COG5368@1|root,COG5368@2|Bacteria,4NE34@976|Bacteroidetes,2FM8G@200643|Bacteroidia,22VX0@171551|Porphyromonadaceae	976|Bacteroidetes	S	Putative glucoamylase	-	-	-	-	-	-	-	-	-	-	-	-	Big_5,Glycoamylase
BYD3_k127_3672900_0	1239962.C943_02207	4.551e-196	620.0	COG5368@1|root,COG5368@2|Bacteria,4NE34@976|Bacteroidetes,47P3I@768503|Cytophagia	976|Bacteroidetes	S	protein conserved in bacteria	-	-	-	-	-	-	-	-	-	-	-	-	DUF3131,Glycoamylase
BYD3_k127_3672900_4	105559.Nwat_1360	2.743e-98	334.0	COG3852@1|root,COG4251@1|root,COG3852@2|Bacteria,COG4251@2|Bacteria,1NSQ1@1224|Proteobacteria,1RMUV@1236|Gammaproteobacteria,1WYC4@135613|Chromatiales	135613|Chromatiales	T	signal transduction histidine kinase	-	-	-	-	-	-	-	-	-	-	-	-	HATPase_c,HisKA,PAS_4
BYD3_k127_3672900_6	247490.KSU1_D0853	2.475e-36	158.0	COG5001@1|root,COG5001@2|Bacteria,2IY4F@203682|Planctomycetes	203682|Planctomycetes	T	Putative diguanylate phosphodiesterase	-	-	-	-	-	-	-	-	-	-	-	-	EAL,GAF_2,GGDEF,PAS_3,PAS_9,Response_reg
BYD3_k127_3672900_3	927658.AJUM01000037_gene1855	5.742e-107	372.0	COG0642@1|root,COG0642@2|Bacteria,4NJVF@976|Bacteroidetes,2G152@200643|Bacteroidia	976|Bacteroidetes	T	His Kinase A (phosphoacceptor) domain	-	-	-	-	-	-	-	-	-	-	-	-	HATPase_c,HisKA,Response_reg
BYD3_k127_3672900_1	745718.JADT01000003_gene2284	7.439e-156	501.0	COG1108@1|root,COG1108@2|Bacteria,4NH3D@976|Bacteroidetes,1HY97@117743|Flavobacteriia	976|Bacteroidetes	P	ABC-type Mn2 Zn2 transport systems permease components	mntD	-	-	ko:K11709	ko02010,map02010	M00319	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.15	-	-	ABC-3
BYD3_k127_3672900_5	980584.AFPB01000066_gene3355	2.429e-70	242.0	COG1108@1|root,COG1108@2|Bacteria,4NH3D@976|Bacteroidetes,1HZBN@117743|Flavobacteriia,406UU@61432|unclassified Flavobacteriaceae	976|Bacteroidetes	P	ABC 3 transport family	mntC	-	-	ko:K11708	ko02010,map02010	M00319	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.15	-	-	ABC-3,Fe_dep_repr_C
BYD3_k127_368114_7	1134912.AJTV01000003_gene1517	4.666e-18	84.0	arCOG06832@1|root,31H39@2|Bacteria,1RJBH@1224|Proteobacteria,2U9PE@28211|Alphaproteobacteria	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	DUF2892
BYD3_k127_368114_3	1121904.ARBP01000013_gene371	2.643e-117	401.0	2CB42@1|root,2Z7Y3@2|Bacteria,4NEUY@976|Bacteroidetes,47N6R@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_368114_5	929703.KE386491_gene775	2.725e-85	293.0	COG2188@1|root,COG2188@2|Bacteria,4PMHY@976|Bacteroidetes,47YD4@768503|Cytophagia	976|Bacteroidetes	K	helix_turn_helix gluconate operon transcriptional repressor	-	-	-	-	-	-	-	-	-	-	-	-	GntR,Peripla_BP_3
BYD3_k127_368114_2	1123008.KB905693_gene1480	5.453e-130	423.0	COG4975@1|root,COG4975@2|Bacteria,4NF22@976|Bacteroidetes,2FMYN@200643|Bacteroidia,22X3I@171551|Porphyromonadaceae	976|Bacteroidetes	G	Sugar transport protein	-	-	-	ko:K05340	-	-	-	-	ko00000,ko02000	2.A.7.5	-	-	Ureide_permease
BYD3_k127_368114_0	1123008.KB905706_gene840	9.853e-164	529.0	COG2730@1|root,COG2730@2|Bacteria,4NF3J@976|Bacteroidetes,2FMU6@200643|Bacteroidia,22XBB@171551|Porphyromonadaceae	976|Bacteroidetes	G	Putative collagen-binding domain of a collagenase	-	-	-	-	-	-	-	-	-	-	-	-	Collagen_bind_2,DUF4038
BYD3_k127_368114_6	1121904.ARBP01000013_gene377	1.495e-81	279.0	COG1082@1|root,COG1082@2|Bacteria,4NPBS@976|Bacteroidetes,47Q6G@768503|Cytophagia	976|Bacteroidetes	G	Xylose isomerase-like TIM barrel	-	-	-	-	-	-	-	-	-	-	-	-	AP_endonuc_2
BYD3_k127_368114_4	1123008.KB905693_gene1483	3.329e-104	345.0	COG0287@1|root,COG0287@2|Bacteria,4NGI9@976|Bacteroidetes	976|Bacteroidetes	E	Phosphogluconate dehydrogenase (decarboxylating) C-term	-	-	-	-	-	-	-	-	-	-	-	-	NAD_binding_2,PGDH_C
BYD3_k127_368114_1	1123008.KB905693_gene1482	8.249e-158	503.0	COG0673@1|root,COG0673@2|Bacteria,4NE07@976|Bacteroidetes,2FNUN@200643|Bacteroidia,22X96@171551|Porphyromonadaceae	976|Bacteroidetes	S	Oxidoreductase NAD-binding domain protein	gfo_1	-	1.1.1.384	ko:K13327,ko:K22230	ko00523,ko00562,ko01120,ko01130,map00523,map00562,map01120,map01130	M00801,M00802	R05526,R09954	RC00182,RC00897	ko00000,ko00001,ko00002,ko01000	-	-	-	GFO_IDH_MocA,GFO_IDH_MocA_C
BYD3_k127_3729742_0	1121129.KB903359_gene1179	8.743e-176	558.0	COG1488@1|root,COG1488@2|Bacteria,4NFQK@976|Bacteroidetes,2FM8S@200643|Bacteroidia,22XJW@171551|Porphyromonadaceae	976|Bacteroidetes	H	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP	pncB	-	6.3.4.21	ko:K00763	ko00760,ko01100,map00760,map01100	-	R01724	RC00033	ko00000,ko00001,ko01000	-	-	-	NAPRTase
BYD3_k127_3729742_1	313606.M23134_03473	6.997e-104	343.0	COG1335@1|root,COG1335@2|Bacteria,4NKYM@976|Bacteroidetes,47MBU@768503|Cytophagia	976|Bacteroidetes	Q	Isochorismatase family	-	-	-	-	-	-	-	-	-	-	-	-	Isochorismatase
BYD3_k127_3729742_2	471854.Dfer_1125	1.835e-32	128.0	COG1595@1|root,COG1595@2|Bacteria,4NMYQ@976|Bacteroidetes,47PII@768503|Cytophagia	976|Bacteroidetes	K	TIGRFAM RNA polymerase sigma factor, sigma-70 family	-	-	-	ko:K03088	-	-	-	-	ko00000,ko03021	-	-	-	Sigma70_r2,Sigma70_r4_2
BYD3_k127_3801266_0	694427.Palpr_1017	0.0	1289.0	COG0841@1|root,COG0841@2|Bacteria,4NDZG@976|Bacteroidetes,2G0EK@200643|Bacteroidia	976|Bacteroidetes	V	AcrB/AcrD/AcrF family	cusA	-	-	ko:K07787	ko02020,map02020	-	-	-	ko00000,ko00001,ko02000	2.A.6.1.4	-	-	ACR_tran
BYD3_k127_3801266_2	694427.Palpr_1018	3.722e-133	439.0	COG1538@1|root,COG1538@2|Bacteria,4NDXW@976|Bacteroidetes,2FN4C@200643|Bacteroidia,22XHC@171551|Porphyromonadaceae	976|Bacteroidetes	MU	Outer membrane efflux protein	-	-	-	-	-	-	-	-	-	-	-	-	OEP
BYD3_k127_3801266_1	1168034.FH5T_20145	2.356e-168	546.0	COG0845@1|root,COG0845@2|Bacteria,4NG8S@976|Bacteroidetes,2FMQN@200643|Bacteroidia	976|Bacteroidetes	M	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family	-	-	-	ko:K07798	ko02020,map02020	-	-	-	ko00000,ko00001,ko02000	2.A.6.1.4,8.A.1	-	-	DUF3347,HMA,HlyD_D23
BYD3_k127_3801266_3	1123008.KB905704_gene502	4.674e-59	209.0	COG1253@1|root,COG1253@2|Bacteria,4NE9R@976|Bacteroidetes,2FN9R@200643|Bacteroidia,22W70@171551|Porphyromonadaceae	976|Bacteroidetes	P	Transporter associated domain	corC_1	-	-	ko:K03699	-	-	-	-	ko00000,ko02042	-	-	-	CBS,CorC_HlyC,DUF21
BYD3_k127_3931336_3	385682.AFSL01000024_gene2032	2.197e-47	182.0	COG1131@1|root,COG1131@2|Bacteria,4NHPD@976|Bacteroidetes,2FRF1@200643|Bacteroidia,3XIKU@558415|Marinilabiliaceae	976|Bacteroidetes	V	ABC-2 type transporter	-	-	-	-	-	-	-	-	-	-	-	-	ABC2_membrane,ABC_tran
BYD3_k127_3931336_2	1191523.MROS_0562	1.169e-60	215.0	COG2836@1|root,COG2836@2|Bacteria	2|Bacteria	K	Biogenesis protein	-	-	-	-	-	-	-	-	-	-	-	-	DsbD_2
BYD3_k127_3931336_4	583355.Caka_2946	1.784e-31	127.0	COG0139@1|root,COG0139@2|Bacteria,46SZA@74201|Verrucomicrobia,3K7YM@414999|Opitutae	414999|Opitutae	E	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP	hisI	-	3.5.4.19	ko:K01496	ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230	M00026	R04037	RC01055	ko00000,ko00001,ko00002,ko01000	-	-	-	PRA-CH
BYD3_k127_3931336_1	1408473.JHXO01000003_gene2553	5.848e-80	274.0	COG2197@1|root,COG2197@2|Bacteria,4NR5M@976|Bacteroidetes,2FQRF@200643|Bacteroidia	976|Bacteroidetes	K	COG NOG38984 non supervised orthologous group	-	-	-	-	-	-	-	-	-	-	-	-	GerE,PAS_3
BYD3_k127_3931336_0	1408473.JHXO01000003_gene2552	2.451e-234	748.0	COG1629@1|root,COG1629@2|Bacteria,4PKVH@976|Bacteroidetes,2FNUV@200643|Bacteroidia	976|Bacteroidetes	P	CarboxypepD_reg-like domain	-	-	-	-	-	-	-	-	-	-	-	-	CarbopepD_reg_2
BYD3_k127_3984270_1	1168034.FH5T_10410	8.09e-209	671.0	COG0841@1|root,COG1131@1|root,COG0841@2|Bacteria,COG1131@2|Bacteria,4NF8M@976|Bacteroidetes,2FQY7@200643|Bacteroidia	976|Bacteroidetes	V	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family	-	-	-	-	-	-	-	-	-	-	-	-	ABC_tran,ACR_tran
BYD3_k127_3984270_0	1168034.FH5T_10400	0.0	1078.0	COG0841@1|root,COG0841@2|Bacteria,4NGCI@976|Bacteroidetes,2FM1V@200643|Bacteroidia	976|Bacteroidetes	V	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family	-	-	-	ko:K03296	-	-	-	-	ko00000	2.A.6.2	-	-	ACR_tran
BYD3_k127_3984270_6	1408473.JHXO01000009_gene3335	3.002e-105	353.0	COG0845@1|root,COG0845@2|Bacteria,4NERP@976|Bacteroidetes,2FQSG@200643|Bacteroidia	976|Bacteroidetes	M	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family	-	-	-	ko:K03585	ko01501,ko01503,map01501,map01503	M00646,M00647,M00699,M00718	-	-	ko00000,ko00001,ko00002,ko01504,ko02000,ko03036	2.A.6.2,8.A.1.6	-	-	HlyD_D23,OEP
BYD3_k127_3984270_3	1408473.JHXO01000009_gene3336	1.756e-149	487.0	COG1538@1|root,COG1538@2|Bacteria,4NGIX@976|Bacteroidetes,2FM9H@200643|Bacteroidia	976|Bacteroidetes	MU	Outer membrane efflux protein	-	-	-	-	-	-	-	-	-	-	-	-	OEP
BYD3_k127_3984270_2	1408473.JHXO01000009_gene3337	2.289e-203	673.0	COG1277@1|root,COG1277@2|Bacteria,4NI5T@976|Bacteroidetes,2FNVZ@200643|Bacteroidia	976|Bacteroidetes	E	ABC-type transport system involved in multi-copper enzyme maturation permease component	-	-	-	-	-	-	-	-	-	-	-	-	Peptidase_M1
BYD3_k127_3984270_5	1408473.JHXO01000009_gene3338	4.255e-122	398.0	COG1131@1|root,COG1131@2|Bacteria,4NFWM@976|Bacteroidetes,2FP8M@200643|Bacteroidia	976|Bacteroidetes	V	ABC-type multidrug transport system ATPase component	-	-	-	-	-	-	-	-	-	-	-	-	ABC_tran
BYD3_k127_3984270_4	1168034.FH5T_09255	5.548e-132	429.0	28IWX@1|root,2Z8V0@2|Bacteria,4PPT4@976|Bacteroidetes	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_3992449_0	153721.MYP_2127	2.799e-136	445.0	COG0793@1|root,COG0793@2|Bacteria,4NDWU@976|Bacteroidetes,47JTG@768503|Cytophagia	976|Bacteroidetes	M	Belongs to the peptidase S41A family	prc	-	3.4.21.102	ko:K03797	-	-	-	-	ko00000,ko01000,ko01002	-	-	-	PDZ_2,Peptidase_S41
BYD3_k127_3992449_2	1410668.JNKC01000005_gene2234	4.127e-56	205.0	COG0115@1|root,COG0115@2|Bacteria,1TPY2@1239|Firmicutes,25930@186801|Clostridia,36DVP@31979|Clostridiaceae	186801|Clostridia	EH	Aminotransferase class IV	ilvE2	-	2.6.1.42	ko:K00826	ko00270,ko00280,ko00290,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00270,map00280,map00290,map00770,map01100,map01110,map01130,map01210,map01230	M00019,M00036,M00119,M00570	R01090,R01214,R02199,R10991	RC00006,RC00036	ko00000,ko00001,ko00002,ko01000,ko01007	-	-	-	Aminotran_4
BYD3_k127_3992449_3	1408473.JHXO01000004_gene24	2.003e-20	100.0	COG0810@1|root,COG0810@2|Bacteria	2|Bacteria	M	energy transducer activity	-	-	-	ko:K03646,ko:K03832	-	-	-	-	ko00000,ko02000	2.C.1.1,2.C.1.2	-	-	TonB_2,TonB_C
BYD3_k127_3992449_1	1408473.JHXO01000007_gene843	1.045e-130	451.0	COG0823@1|root,COG0823@2|Bacteria,4NGPR@976|Bacteroidetes,2FNGJ@200643|Bacteroidia	976|Bacteroidetes	U	Involved in the tonB-independent uptake of proteins	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_4012697_0	313598.MED152_00445	0.0	1097.0	28HKI@1|root,2Z7VC@2|Bacteria,4NFS2@976|Bacteroidetes,1HYBU@117743|Flavobacteriia,3VVMQ@52959|Polaribacter	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_4012697_5	1168034.FH5T_12590	4.414e-113	380.0	COG4826@1|root,COG4826@2|Bacteria,4NG1G@976|Bacteroidetes,2FR07@200643|Bacteroidia	976|Bacteroidetes	O	Belongs to the serpin family	-	-	-	ko:K13963	ko05146,map05146	-	-	-	ko00000,ko00001	-	-	-	Serpin
BYD3_k127_4012697_4	1211813.CAPH01000013_gene604	2.799e-117	390.0	COG0738@1|root,COG0738@2|Bacteria,4NEYR@976|Bacteroidetes,2G2UG@200643|Bacteroidia	976|Bacteroidetes	G	Transporter, major facilitator family protein	-	-	-	ko:K02429	-	-	-	-	ko00000,ko02000	2.A.1.7	-	-	MFS_1
BYD3_k127_4012697_3	485918.Cpin_0489	3.319e-123	404.0	COG2017@1|root,COG2017@2|Bacteria,4NF5G@976|Bacteroidetes,1IPH9@117747|Sphingobacteriia	976|Bacteroidetes	G	Converts alpha-aldose to the beta-anomer	-	-	5.1.3.3	ko:K01785	ko00010,ko00052,ko01100,ko01110,ko01120,ko01130,map00010,map00052,map01100,map01110,map01120,map01130	M00632	R01602,R10619	RC00563	ko00000,ko00001,ko00002,ko01000	-	-	-	Aldose_epim
BYD3_k127_4012697_1	927658.AJUM01000022_gene1129	3.754e-188	595.0	COG0153@1|root,COG0153@2|Bacteria,4NE0C@976|Bacteroidetes,2FNGC@200643|Bacteroidia,3XKC7@558415|Marinilabiliaceae	976|Bacteroidetes	G	Galactokinase galactose-binding signature	galK	-	2.7.1.6	ko:K00849	ko00052,ko00520,ko01100,map00052,map00520,map01100	M00554,M00632	R01092	RC00002,RC00078	ko00000,ko00001,ko00002,ko01000,ko04147	-	-	-	GHMP_kinases_C,GHMP_kinases_N,GalKase_gal_bdg
BYD3_k127_4012697_2	1121012.AUKX01000076_gene17	6.808e-140	449.0	COG2502@1|root,COG2502@2|Bacteria,4NFZA@976|Bacteroidetes,1HYT3@117743|Flavobacteriia,23I1M@178469|Arenibacter	976|Bacteroidetes	E	Aspartate-ammonia ligase	asnA	-	6.3.1.1	ko:K01914	ko00250,ko00460,ko01100,ko01110,ko01230,map00250,map00460,map01100,map01110,map01230	-	R00483	RC00010	ko00000,ko00001,ko01000	-	-	-	AsnA
BYD3_k127_4015673_2	643867.Ftrac_3145	2.133e-30	130.0	COG3064@1|root,COG3064@2|Bacteria,4NEVD@976|Bacteroidetes,47KE6@768503|Cytophagia	976|Bacteroidetes	M	TIGRFAM Bacteroidetes-specific	-	-	-	-	-	-	-	-	-	-	-	-	PorP_SprF
BYD3_k127_4015673_1	886379.AEWI01000013_gene2213	7.366e-49	197.0	COG2373@1|root,COG4386@1|root,COG2373@2|Bacteria,COG4386@2|Bacteria,4PP8A@976|Bacteroidetes	976|Bacteroidetes	S	Immunoglobulin	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_4015673_0	313603.FB2170_16831	1.416e-142	459.0	COG1082@1|root,COG1082@2|Bacteria,4NKFY@976|Bacteroidetes,1I3V7@117743|Flavobacteriia	976|Bacteroidetes	G	Xylose isomerase-like TIM barrel	-	-	-	-	-	-	-	-	-	-	-	-	AP_endonuc_2
BYD3_k127_4095649_4	194439.CT0120	1.863e-54	196.0	COG0778@1|root,COG0778@2|Bacteria,1FEBI@1090|Chlorobi	1090|Chlorobi	C	PFAM nitroreductase	-	-	-	-	-	-	-	-	-	-	-	-	Nitroreductase
BYD3_k127_4095649_5	1121373.KB903643_gene3550	3.066e-35	145.0	COG3735@1|root,COG3735@2|Bacteria,4NN4U@976|Bacteroidetes,47PD6@768503|Cytophagia	976|Bacteroidetes	S	TraB family	-	-	-	ko:K09973	-	-	-	-	ko00000	-	-	-	TraB
BYD3_k127_4095649_6	1270196.JCKI01000004_gene888	6.428e-06	56.0	2A263@1|root,30QGN@2|Bacteria,4NMYV@976|Bacteroidetes,1ISPH@117747|Sphingobacteriia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_4095649_3	1168034.FH5T_10280	3.052e-77	271.0	COG0095@1|root,COG0095@2|Bacteria,4NE5F@976|Bacteroidetes,2FMDJ@200643|Bacteroidia	976|Bacteroidetes	H	Lipoate-protein ligase	lplA	-	6.3.1.20	ko:K03800	ko00785,ko01100,map00785,map01100	-	R07770,R07771,R11143	RC00043,RC00070,RC00090,RC00992,RC02896	ko00000,ko00001,ko01000	-	-	-	BPL_LplA_LipB,Lip_prot_lig_C
BYD3_k127_4095649_1	1347342.BN863_8680	1.211e-165	529.0	COG2195@1|root,COG2195@2|Bacteria,4NE7N@976|Bacteroidetes,1HWV8@117743|Flavobacteriia	976|Bacteroidetes	E	Cleaves the N-terminal amino acid of tripeptides	pepT	-	3.4.11.4	ko:K01258	-	-	-	-	ko00000,ko01000,ko01002	-	-	-	M20_dimer,Peptidase_M20
BYD3_k127_4095649_0	411479.BACUNI_04183	6.381e-195	629.0	2DBT8@1|root,2ZAWK@2|Bacteria,4NK5N@976|Bacteroidetes,2FUTE@200643|Bacteroidia,4ATAJ@815|Bacteroidaceae	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_4095649_2	1122931.AUAE01000019_gene941	6.542e-134	439.0	COG0477@1|root,COG2814@2|Bacteria,4NGAV@976|Bacteroidetes,2G0JU@200643|Bacteroidia,22WHM@171551|Porphyromonadaceae	976|Bacteroidetes	EGP	Transmembrane secretion effector	-	-	-	ko:K08217	-	-	-	-	br01600,ko00000,ko01504,ko02000	2.A.1.21.1,2.A.1.21.22	-	-	MFS_1,MFS_3
BYD3_k127_4104980_4	1033810.HLPCO_001973	7.514e-93	309.0	COG0428@1|root,COG0428@2|Bacteria,2NQN6@2323|unclassified Bacteria	2|Bacteria	P	Zinc transporter zupT	zupT	GO:0000041,GO:0003674,GO:0005215,GO:0005381,GO:0005384,GO:0005385,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006811,GO:0006812,GO:0006824,GO:0006826,GO:0006828,GO:0006829,GO:0008150,GO:0008324,GO:0015075,GO:0015086,GO:0015087,GO:0015093,GO:0015318,GO:0015684,GO:0015691,GO:0016020,GO:0022857,GO:0022890,GO:0030001,GO:0034220,GO:0034755,GO:0044464,GO:0046873,GO:0046915,GO:0051179,GO:0051234,GO:0055085,GO:0070574,GO:0070838,GO:0071421,GO:0071577,GO:0071944,GO:0072509,GO:0072511,GO:0098655,GO:0098660,GO:0098662,GO:1903874	-	ko:K07238	-	-	-	-	ko00000,ko02000	2.A.5.5	-	iECIAI39_1322.ECIAI39_3536	Zip
BYD3_k127_4104980_3	1121097.JCM15093_1900	6.157e-102	340.0	COG0053@1|root,COG0053@2|Bacteria,4NFBB@976|Bacteroidetes,2G36X@200643|Bacteroidia,4AWAU@815|Bacteroidaceae	976|Bacteroidetes	P	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family	-	-	-	-	-	-	-	-	-	-	-	-	Cation_efflux,ZT_dimer
BYD3_k127_4104980_0	1168289.AJKI01000063_gene3511	3.569e-265	834.0	COG0557@1|root,COG0557@2|Bacteria,4NE7T@976|Bacteroidetes,2FMM6@200643|Bacteroidia,3XIQP@558415|Marinilabiliaceae	976|Bacteroidetes	K	RNB	rnr	-	-	ko:K12573,ko:K12585	ko03018,map03018	M00391	-	-	ko00000,ko00001,ko00002,ko01000,ko03016,ko03019	-	-	-	OB_RNB,RNB,S1
BYD3_k127_4104980_2	1124780.ANNU01000002_gene1569	3.081e-171	547.0	COG0700@1|root,COG2715@1|root,COG0700@2|Bacteria,COG2715@2|Bacteria,4NFUN@976|Bacteroidetes,47JSE@768503|Cytophagia	976|Bacteroidetes	S	PFAM Nucleoside recognition	spmA	-	-	ko:K06373	-	-	-	-	ko00000	-	-	-	Gate
BYD3_k127_4104980_9	1168034.FH5T_09290	2.858e-22	104.0	COG3637@1|root,COG3637@2|Bacteria,4NYY3@976|Bacteroidetes	976|Bacteroidetes	M	Outer membrane protein beta-barrel domain	-	-	-	-	-	-	-	-	-	-	-	-	OMP_b-brl,OMP_b-brl_2
BYD3_k127_4104980_5	929562.Emtol_4062	1.267e-80	276.0	COG0846@1|root,COG0846@2|Bacteria,4NE9Q@976|Bacteroidetes,47KMH@768503|Cytophagia	976|Bacteroidetes	K	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form	cobB	-	-	ko:K12410	-	-	-	-	ko00000,ko01000	-	-	-	SIR2
BYD3_k127_4104980_1	153721.MYP_1274	4.531e-188	615.0	COG0489@1|root,COG3206@1|root,COG0489@2|Bacteria,COG3206@2|Bacteria,4NEXU@976|Bacteroidetes,47JQC@768503|Cytophagia	976|Bacteroidetes	DM	TIGRFAM capsular exopolysaccharide family	-	-	-	-	-	-	-	-	-	-	-	-	AAA_31,CbiA,GNVR,Wzz
BYD3_k127_4104980_8	869213.JCM21142_31209	5.698e-33	139.0	COG0589@1|root,COG0589@2|Bacteria	2|Bacteria	T	AMP binding	-	-	-	-	-	-	-	-	-	-	-	-	Usp
BYD3_k127_4104980_10	1408433.JHXV01000009_gene1313	1.993e-20	95.0	2AD7J@1|root,312WH@2|Bacteria,4NR1A@976|Bacteroidetes,1IMRK@117743|Flavobacteriia,2PBRK@246874|Cryomorphaceae	976|Bacteroidetes	S	Domain of unknown function (DUF1987)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1987
BYD3_k127_4104980_6	1168034.FH5T_05705	5.591e-56	197.0	COG3118@1|root,COG3118@2|Bacteria,4NQNX@976|Bacteroidetes,2FSPP@200643|Bacteroidia	976|Bacteroidetes	O	Thioredoxin	-	-	-	-	-	-	-	-	-	-	-	-	Thioredoxin
BYD3_k127_4104980_11	1168034.FH5T_20375	7.308e-12	68.0	COG0607@1|root,COG0607@2|Bacteria,4NXGV@976|Bacteroidetes	976|Bacteroidetes	P	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_4104980_7	709991.Odosp_2063	4.625e-53	192.0	COG4799@1|root,COG4799@2|Bacteria,4NG2H@976|Bacteroidetes,2FQSM@200643|Bacteroidia,22XE5@171551|Porphyromonadaceae	976|Bacteroidetes	I	COGs COG4799 Acetyl-CoA carboxylase carboxyltransferase component (subunits alpha and beta)	-	-	-	-	-	-	-	-	-	-	-	-	Carboxyl_trans
BYD3_k127_413306_2	869213.JCM21142_72846	6.257e-35	146.0	COG3266@1|root,COG3266@2|Bacteria,4NH1U@976|Bacteroidetes	976|Bacteroidetes	M	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety	-	-	-	-	-	-	-	-	-	-	-	-	OMP_b-brl_2
BYD3_k127_413306_0	1408473.JHXO01000006_gene1106	5.97e-97	326.0	COG0741@1|root,COG0741@2|Bacteria,4NH4W@976|Bacteroidetes,2FM9R@200643|Bacteroidia	976|Bacteroidetes	M	Transglycosylase SLT domain	mltD_2	-	-	-	-	-	-	-	-	-	-	-	SLT
BYD3_k127_413306_1	1408473.JHXO01000006_gene1107	4.425e-69	236.0	COG0178@1|root,COG0178@2|Bacteria,4NFQU@976|Bacteroidetes,2FNMG@200643|Bacteroidia	976|Bacteroidetes	L	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate	uvrA2	-	-	ko:K03701	ko03420,map03420	-	-	-	ko00000,ko00001,ko03400	-	-	-	ABC_tran
BYD3_k127_4150678_2	1408473.JHXO01000011_gene3063	8.78e-138	457.0	COG1277@1|root,COG3225@1|root,COG1277@2|Bacteria,COG3225@2|Bacteria,4NF62@976|Bacteroidetes,2FQ8Z@200643|Bacteroidia	976|Bacteroidetes	N	ABC-type uncharacterized transport system	gldG	-	-	ko:K01992	-	M00254	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	ABC2_membrane_2,ABC_transp_aux
BYD3_k127_4150678_6	869213.JCM21142_72561	1.552e-79	272.0	COG1277@1|root,COG1277@2|Bacteria,4NG5G@976|Bacteroidetes,47KPQ@768503|Cytophagia	976|Bacteroidetes	S	TIGRFAM Gliding motility-associated ABC transporter permease protein GldF	gldF	-	-	ko:K01992	-	M00254	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	ABC2_membrane_2,ABC2_membrane_3
BYD3_k127_4150678_9	613026.HRAG_00251	6.471e-18	94.0	COG2849@1|root,COG2849@2|Bacteria,1MZCG@1224|Proteobacteria,42XCP@68525|delta/epsilon subdivisions,2YQ7V@29547|Epsilonproteobacteria	29547|Epsilonproteobacteria	S	MORN repeat variant	-	-	-	-	-	-	-	-	-	-	-	-	MORN_2
BYD3_k127_4150678_1	385682.AFSL01000069_gene1481	6.673e-188	597.0	COG2265@1|root,COG2265@2|Bacteria,4NFP1@976|Bacteroidetes,2FNRC@200643|Bacteroidia,3XJPY@558415|Marinilabiliaceae	976|Bacteroidetes	J	tRNA (Uracil-5-)-methyltransferase	rumA	-	2.1.1.190	ko:K03215	-	-	-	-	ko00000,ko01000,ko03009	-	-	-	TRAM,tRNA_U5-meth_tr
BYD3_k127_4150678_7	742817.HMPREF9449_01745	1.224e-51	188.0	COG0691@1|root,COG0691@2|Bacteria,4NNJU@976|Bacteroidetes,2FQX0@200643|Bacteroidia,22XVF@171551|Porphyromonadaceae	976|Bacteroidetes	O	the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA	smpB	-	-	ko:K03664	-	-	-	-	ko00000	-	-	-	SmpB
BYD3_k127_4150678_5	385682.AFSL01000041_gene307	2.292e-107	357.0	COG0324@1|root,COG0324@2|Bacteria,4NFJY@976|Bacteroidetes,2FM0H@200643|Bacteroidia,3XJCQ@558415|Marinilabiliaceae	976|Bacteroidetes	J	Isopentenyl transferase	miaA2	GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016765,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0052381,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360	2.5.1.75	ko:K00791	ko00908,ko01100,ko01110,map00908,map01100,map01110	-	R01122	RC02820	ko00000,ko00001,ko01000,ko01006,ko03016	-	-	-	IPPT
BYD3_k127_4150678_8	1408433.JHXV01000038_gene2198	5.362e-49	192.0	COG2885@1|root,COG2885@2|Bacteria,4NRRF@976|Bacteroidetes	976|Bacteroidetes	M	Belongs to the ompA family	-	-	-	-	-	-	-	-	-	-	-	-	OmpA
BYD3_k127_4150678_10	1250005.PHEL85_1016	0.0004956	52.0	2B6X6@1|root,31ZX3@2|Bacteria,4PK6N@976|Bacteroidetes,1II2I@117743|Flavobacteriia,3VWWE@52959|Polaribacter	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_4150678_4	926556.Echvi_1206	2.271e-109	357.0	COG1611@1|root,COG1611@2|Bacteria,4NF20@976|Bacteroidetes,47M0E@768503|Cytophagia	976|Bacteroidetes	S	Belongs to the LOG family	fmt2	-	3.2.2.10	ko:K06966	ko00230,ko00240,map00230,map00240	-	R00182,R00510	RC00063,RC00318	ko00000,ko00001,ko01000	-	-	-	Lysine_decarbox
BYD3_k127_4150678_0	886379.AEWI01000031_gene264	1.786e-263	821.0	COG0178@1|root,COG0178@2|Bacteria,4NFQU@976|Bacteroidetes,2FNMG@200643|Bacteroidia,3XJ19@558415|Marinilabiliaceae	976|Bacteroidetes	L	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate	uvrA2	-	-	ko:K03701	ko03420,map03420	-	-	-	ko00000,ko00001,ko03400	-	-	-	ABC_tran
BYD3_k127_4150678_3	886379.AEWI01000031_gene264	5.903e-110	360.0	COG0178@1|root,COG0178@2|Bacteria,4NFQU@976|Bacteroidetes,2FNMG@200643|Bacteroidia,3XJ19@558415|Marinilabiliaceae	976|Bacteroidetes	L	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate	uvrA2	-	-	ko:K03701	ko03420,map03420	-	-	-	ko00000,ko00001,ko03400	-	-	-	ABC_tran
BYD3_k127_4172550_4	927658.AJUM01000042_gene1645	4.338e-56	204.0	COG1145@1|root,COG4624@1|root,COG1145@2|Bacteria,COG4624@2|Bacteria,4NFXC@976|Bacteroidetes,2FP4U@200643|Bacteroidia,3XJD3@558415|Marinilabiliaceae	976|Bacteroidetes	C	Putative Fe-S cluster	-	-	-	-	-	-	-	-	-	-	-	-	FeS,Fe_hyd_lg_C,Fer4,Fer4_10
BYD3_k127_4172550_5	886379.AEWI01000010_gene629	1.687e-20	94.0	COG1905@1|root,COG1905@2|Bacteria,4NWS0@976|Bacteroidetes,2FV0J@200643|Bacteroidia,3XKDG@558415|Marinilabiliaceae	976|Bacteroidetes	C	Thioredoxin-like [2Fe-2S] ferredoxin	-	-	-	-	-	-	-	-	-	-	-	-	2Fe-2S_thioredx
BYD3_k127_4172550_3	742725.HMPREF9450_02270	6.301e-63	222.0	COG2344@1|root,COG2344@2|Bacteria,4NIIF@976|Bacteroidetes,2FKZF@200643|Bacteroidia,22UDN@171550|Rikenellaceae	976|Bacteroidetes	K	Modulates transcription in response to changes in cellular NADH NAD( ) redox state	rex	-	-	ko:K01926	-	-	-	-	ko00000,ko03000	-	-	-	CoA_binding,Put_DNA-bind_N
BYD3_k127_4172550_1	927658.AJUM01000047_gene2859	8.529e-110	365.0	COG0673@1|root,COG0673@2|Bacteria,4NEQB@976|Bacteroidetes,2FPVB@200643|Bacteroidia	976|Bacteroidetes	S	Oxidoreductase NAD-binding domain protein	yvaA	-	1.1.1.371	ko:K16044	ko00562,ko01120,map00562,map01120	-	R09954	RC00182	ko00000,ko00001,ko01000	-	-	-	GFO_IDH_MocA,GFO_IDH_MocA_C
BYD3_k127_4172550_0	926549.KI421517_gene119	1.754e-280	894.0	COG1472@1|root,COG1680@1|root,COG1472@2|Bacteria,COG1680@2|Bacteria,4NET8@976|Bacteroidetes,47M0A@768503|Cytophagia	976|Bacteroidetes	G	Glycosyl hydrolase family 3 N terminal domain	-	-	-	-	-	-	-	-	-	-	-	-	Beta-lactamase,Glyco_hydro_3,Glyco_hydro_3_C
BYD3_k127_4172550_2	385682.AFSL01000024_gene2032	4.047e-78	282.0	COG1131@1|root,COG1131@2|Bacteria,4NHPD@976|Bacteroidetes,2FRF1@200643|Bacteroidia,3XIKU@558415|Marinilabiliaceae	976|Bacteroidetes	V	ABC-2 type transporter	-	-	-	-	-	-	-	-	-	-	-	-	ABC2_membrane,ABC_tran
BYD3_k127_4221303_9	1121289.JHVL01000015_gene2708	5.362e-14	72.0	COG0428@1|root,COG0428@2|Bacteria,1TP7J@1239|Firmicutes,247Q2@186801|Clostridia,36FEF@31979|Clostridiaceae	186801|Clostridia	P	Zinc transporter	zupT	-	-	ko:K07238	-	-	-	-	ko00000,ko02000	2.A.5.5	-	-	Zip
BYD3_k127_4221303_3	1168034.FH5T_07905	6.916e-83	281.0	COG0664@1|root,COG0664@2|Bacteria,4NFB1@976|Bacteroidetes,2FSG2@200643|Bacteroidia	976|Bacteroidetes	K	Bacterial regulatory proteins, crp family	-	-	-	ko:K01420	-	-	-	-	ko00000,ko03000	-	-	-	HTH_Crp_2,cNMP_binding
BYD3_k127_4221303_5	385682.AFSL01000060_gene1757	8.973e-49	178.0	COG1765@1|root,COG1765@2|Bacteria,4NNTY@976|Bacteroidetes,2FU46@200643|Bacteroidia,3XK5V@558415|Marinilabiliaceae	976|Bacteroidetes	O	OsmC-like protein	-	-	-	ko:K07397	-	-	-	-	ko00000	-	-	-	OsmC
BYD3_k127_4221303_4	1168034.FH5T_09250	7.583e-65	229.0	COG1040@1|root,COG1040@2|Bacteria,4NNI1@976|Bacteroidetes,2FP14@200643|Bacteroidia	976|Bacteroidetes	S	ComF family	comF	-	2.4.2.14	ko:K00764	ko00230,ko00250,ko01100,ko01110,ko01130,map00230,map00250,map01100,map01110,map01130	M00048	R01072	RC00010,RC02724,RC02752	ko00000,ko00001,ko00002,ko01000,ko01002	-	-	-	Pribosyltran
BYD3_k127_4221303_1	1408473.JHXO01000001_gene2274	3.671e-158	531.0	COG1729@1|root,COG1729@2|Bacteria,4PKGA@976|Bacteroidetes,2G3G6@200643|Bacteroidia	976|Bacteroidetes	S	Tetratricopeptide repeat	-	-	-	-	-	-	-	-	-	-	-	-	TPR_16,TPR_6,TPR_8
BYD3_k127_4221303_0	1408473.JHXO01000001_gene2275	1.201e-202	642.0	COG0745@1|root,COG0745@2|Bacteria,4PM6N@976|Bacteroidetes,2G0CY@200643|Bacteroidia	976|Bacteroidetes	T	domain protein	-	-	-	-	-	-	-	-	-	-	-	-	PglZ,Response_reg
BYD3_k127_4221303_6	1408310.JHUW01000007_gene373	3.381e-39	150.0	COG0802@1|root,COG0802@2|Bacteria,4NS89@976|Bacteroidetes,2FS1V@200643|Bacteroidia	976|Bacteroidetes	S	Hydrolase, P-loop family	yjeE	-	-	ko:K06925	-	-	-	-	ko00000,ko03016	-	-	-	TsaE
BYD3_k127_4221303_2	1408473.JHXO01000001_gene2362	1.459e-125	413.0	COG0686@1|root,COG0686@2|Bacteria,4NE8F@976|Bacteroidetes,2FP71@200643|Bacteroidia	976|Bacteroidetes	C	Belongs to the AlaDH PNT family	ald	-	1.4.1.1	ko:K00259	ko00250,ko00430,ko01100,map00250,map00430,map01100	-	R00396	RC00008	ko00000,ko00001,ko01000	-	-	-	AlaDh_PNT_C,AlaDh_PNT_N
BYD3_k127_4221303_8	1408473.JHXO01000001_gene2221	1.733e-29	126.0	COG0500@1|root,COG2226@2|Bacteria	2|Bacteria	Q	methyltransferase	-	-	2.1.1.163,2.1.1.201	ko:K03183	ko00130,ko01100,ko01110,map00130,map01100,map01110	M00116,M00117	R04990,R04993,R06859,R08774,R09736	RC00003,RC01253,RC01662	ko00000,ko00001,ko00002,ko01000	-	-	-	Methyltransf_11,Methyltransf_23,Methyltransf_25,Methyltransf_31
BYD3_k127_4221303_7	153721.MYP_2330	5.166e-31	126.0	COG4772@1|root,COG4772@2|Bacteria,4NG13@976|Bacteroidetes,47MUX@768503|Cytophagia	976|Bacteroidetes	P	TIGRFAM Bacteroidetes-specific	-	-	-	-	-	-	-	-	-	-	-	-	PorP_SprF
BYD3_k127_4262938_3	742727.HMPREF9447_02708	1.121e-79	273.0	COG3250@1|root,COG3250@2|Bacteria,4NF3W@976|Bacteroidetes,2FWEX@200643|Bacteroidia,4AT09@815|Bacteroidaceae	976|Bacteroidetes	G	Beta galactosidase small chain	lacZ	-	3.2.1.23	ko:K01190	ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100	-	R01105,R01678,R03355,R04783,R06114	RC00049,RC00452	ko00000,ko00001,ko01000	-	-	-	Bgal_small_N,DUF4981,Glyco_hydro_2,Glyco_hydro_2_C,Glyco_hydro_2_N
BYD3_k127_4262938_0	1267211.KI669560_gene1253	5.996e-298	922.0	COG3507@1|root,COG3507@2|Bacteria,4NEMG@976|Bacteroidetes,1INMJ@117747|Sphingobacteriia	976|Bacteroidetes	G	Belongs to the glycosyl hydrolase 43 family	-	-	-	-	-	-	-	-	-	-	-	-	F5_F8_type_C,Glyco_hydro_43,fn3
BYD3_k127_4262938_4	1121904.ARBP01000008_gene3256	2.054e-53	192.0	COG0667@1|root,COG0667@2|Bacteria,4PPAM@976|Bacteroidetes	976|Bacteroidetes	C	Aldo/keto reductase family	-	-	-	-	-	-	-	-	-	-	-	-	Aldo_ket_red
BYD3_k127_4262938_5	1121904.ARBP01000008_gene3256	2.545e-47	175.0	COG0667@1|root,COG0667@2|Bacteria,4PPAM@976|Bacteroidetes	976|Bacteroidetes	C	Aldo/keto reductase family	-	-	-	-	-	-	-	-	-	-	-	-	Aldo_ket_red
BYD3_k127_4262938_6	234267.Acid_6776	1.052e-27	123.0	COG0346@1|root,COG0346@2|Bacteria,3Y4RM@57723|Acidobacteria	57723|Acidobacteria	E	PFAM Glyoxalase bleomycin resistance protein dioxygenase	-	-	-	-	-	-	-	-	-	-	-	-	Glyoxalase
BYD3_k127_4262938_1	641524.ADICYQ_5444	2.333e-107	358.0	COG0388@1|root,COG0388@2|Bacteria	2|Bacteria	S	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds	-	-	-	-	-	-	-	-	-	-	-	-	CN_hydrolase
BYD3_k127_4262938_2	1121904.ARBP01000001_gene5620	5.019e-94	325.0	COG5000@1|root,COG5000@2|Bacteria,4NEWF@976|Bacteroidetes,47JZG@768503|Cytophagia	976|Bacteroidetes	T	Histidine kinase	-	-	-	-	-	-	-	-	-	-	-	-	HATPase_c,PAS_8
BYD3_k127_4262938_7	1168289.AJKI01000065_gene3766	1.272e-19	92.0	COG2204@1|root,COG2204@2|Bacteria,4NE89@976|Bacteroidetes,2FMRV@200643|Bacteroidia,3XKRU@558415|Marinilabiliaceae	976|Bacteroidetes	T	Magnesium chelatase, subunit ChlI	-	-	-	-	-	-	-	-	-	-	-	-	HTH_8,Response_reg,Sigma54_activat
BYD3_k127_432379_4	1237149.C900_02542	8.494e-89	305.0	COG1215@1|root,COG1215@2|Bacteria,4NMSY@976|Bacteroidetes,47NMB@768503|Cytophagia	976|Bacteroidetes	M	Glycosyl transferase family 2	-	-	-	-	-	-	-	-	-	-	-	-	Glyco_tranf_2_3,Glycos_transf_2
BYD3_k127_432379_7	742817.HMPREF9449_01834	1.5e-21	98.0	COG2919@1|root,COG2919@2|Bacteria,4NURQ@976|Bacteroidetes,2FTC0@200643|Bacteroidia,22YWW@171551|Porphyromonadaceae	976|Bacteroidetes	D	Septum formation initiator	-	-	-	-	-	-	-	-	-	-	-	-	DivIC
BYD3_k127_432379_0	385682.AFSL01000058_gene1747	1.499e-250	782.0	COG1012@1|root,COG1012@2|Bacteria,4NFTW@976|Bacteroidetes,2FQQ7@200643|Bacteroidia,3XJPR@558415|Marinilabiliaceae	976|Bacteroidetes	C	Aldehyde dehydrogenase family	pruA	-	1.2.1.88,1.5.5.2	ko:K00294,ko:K13821	ko00250,ko00330,ko01100,ko01110,ko01130,map00250,map00330,map01100,map01110,map01130	-	R00245,R00707,R00708,R01253,R04444,R04445,R05051	RC00080,RC00083,RC00216,RC00242,RC00255	ko00000,ko00001,ko01000,ko03000	-	-	-	Aldedh,Pro_dh
BYD3_k127_432379_3	655815.ZPR_3928	2.23e-121	402.0	COG0770@1|root,COG0770@2|Bacteria,4NDWD@976|Bacteroidetes,1HY7Q@117743|Flavobacteriia	976|Bacteroidetes	M	Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein	murF	-	6.3.2.10	ko:K01929	ko00300,ko00550,ko01100,ko01502,map00300,map00550,map01100,map01502	-	R04573,R04617	RC00064,RC00141	ko00000,ko00001,ko01000,ko01011	-	-	-	Mur_ligase,Mur_ligase_C,Mur_ligase_M
BYD3_k127_432379_2	869213.JCM21142_83237	9.412e-215	677.0	COG1262@1|root,COG1262@2|Bacteria,4NE51@976|Bacteroidetes,47JSB@768503|Cytophagia	976|Bacteroidetes	S	TIGRFAM gliding motility-associated lipoprotein GldJ	gldJ	-	-	-	-	-	-	-	-	-	-	-	FGE-sulfatase
BYD3_k127_432379_6	1408433.JHXV01000034_gene12	9.93e-34	142.0	COG4772@1|root,COG4772@2|Bacteria,4NG13@976|Bacteroidetes,1HZRC@117743|Flavobacteriia,2PANF@246874|Cryomorphaceae	976|Bacteroidetes	P	Type IX secretion system membrane protein PorP/SprF	-	-	-	-	-	-	-	-	-	-	-	-	PorP_SprF
BYD3_k127_432379_1	1408473.JHXO01000011_gene3028	3.885e-242	788.0	COG1572@1|root,COG1572@2|Bacteria,4NDY7@976|Bacteroidetes,2FMIV@200643|Bacteroidia	976|Bacteroidetes	S	Peptidase family C25	porU	-	-	-	-	-	-	-	-	-	-	-	Peptidase_C25
BYD3_k127_432379_5	1408473.JHXO01000011_gene3029	2.335e-87	298.0	COG2067@1|root,COG2067@2|Bacteria,4NDZW@976|Bacteroidetes,2FPVJ@200643|Bacteroidia	976|Bacteroidetes	I	Psort location OuterMembrane, score	porV	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_4379508_13	997884.HMPREF1068_03249	3.698e-64	229.0	COG2843@1|root,COG2843@2|Bacteria,4NGD2@976|Bacteroidetes,2FQ0M@200643|Bacteroidia,4AMPS@815|Bacteroidaceae	976|Bacteroidetes	M	Bacterial capsule synthesis protein	-	-	-	ko:K07282	-	-	-	-	ko00000	-	-	-	PGA_cap
BYD3_k127_4379508_9	762903.Pedsa_1958	3.261e-80	276.0	COG0061@1|root,COG0061@2|Bacteria,4NFG5@976|Bacteroidetes,1IPBF@117747|Sphingobacteriia	976|Bacteroidetes	G	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP	nadK	-	2.7.1.23	ko:K00858	ko00760,ko01100,map00760,map01100	-	R00104	RC00002,RC00078	ko00000,ko00001,ko01000	-	-	-	NAD_kinase
BYD3_k127_4379508_10	886379.AEWI01000078_gene1985	4.242e-71	246.0	COG0517@1|root,COG0517@2|Bacteria,4NF8G@976|Bacteroidetes,2FT2B@200643|Bacteroidia,3XIWD@558415|Marinilabiliaceae	976|Bacteroidetes	S	Domain in cystathionine beta-synthase and other proteins.	-	-	-	-	-	-	-	-	-	-	-	-	CBS
BYD3_k127_4379508_5	1408473.JHXO01000004_gene159	1.532e-104	344.0	COG0854@1|root,COG0854@2|Bacteria,4NF4Z@976|Bacteroidetes,2FM21@200643|Bacteroidia	976|Bacteroidetes	H	Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate	pdxJ	GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006725,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0008614,GO:0008615,GO:0009058,GO:0009110,GO:0009987,GO:0016740,GO:0016769,GO:0017144,GO:0018130,GO:0019438,GO:0033856,GO:0034641,GO:0042364,GO:0042816,GO:0042819,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:0072524,GO:0072525,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901615,GO:1901617	2.6.99.2	ko:K03474	ko00750,ko01100,map00750,map01100	M00124	R05838	RC01476	ko00000,ko00001,ko00002,ko01000	-	-	-	PdxJ
BYD3_k127_4379508_11	385682.AFSL01000041_gene273	1.215e-70	249.0	COG2267@1|root,COG2267@2|Bacteria,4PKJZ@976|Bacteroidetes,2G0DQ@200643|Bacteroidia,3XIS2@558415|Marinilabiliaceae	976|Bacteroidetes	I	Putative serine esterase (DUF676)	-	-	-	-	-	-	-	-	-	-	-	-	Abhydrolase_1
BYD3_k127_4379508_16	1237149.C900_03515	2.39e-28	125.0	2E10Y@1|root,32WGY@2|Bacteria,4NTDG@976|Bacteroidetes	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_4379508_7	1077285.AGDG01000023_gene1076	2.292e-87	299.0	COG1477@1|root,COG1477@2|Bacteria,4NGEK@976|Bacteroidetes,2FKZQ@200643|Bacteroidia,4AMF0@815|Bacteroidaceae	976|Bacteroidetes	H	Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein	apbE	-	2.7.1.180	ko:K03734	-	-	-	-	ko00000,ko01000	-	-	-	ApbE
BYD3_k127_4379508_1	927658.AJUM01000034_gene146	7.077e-197	620.0	COG2871@1|root,COG2871@2|Bacteria,4NFKC@976|Bacteroidetes,2FN44@200643|Bacteroidia,3XIKN@558415|Marinilabiliaceae	976|Bacteroidetes	C	2Fe-2S iron-sulfur cluster binding domain	nqrF	-	1.6.5.8	ko:K00351	-	-	-	-	ko00000,ko01000	-	-	-	FAD_binding_6,Fer2,NAD_binding_1
BYD3_k127_4379508_6	709991.Odosp_1610	3.027e-92	306.0	COG2209@1|root,COG2209@2|Bacteria,4NEU0@976|Bacteroidetes,2FMW9@200643|Bacteroidia,22WBF@171551|Porphyromonadaceae	976|Bacteroidetes	C	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol	nqrE	-	1.6.5.8	ko:K00350	-	-	-	-	ko00000,ko01000	-	-	-	Rnf-Nqr
BYD3_k127_4379508_8	1121887.AUDK01000023_gene3470	5.768e-87	291.0	COG1347@1|root,COG1347@2|Bacteria,4NGD9@976|Bacteroidetes,1HXGP@117743|Flavobacteriia,2NUW6@237|Flavobacterium	976|Bacteroidetes	C	Rnf-Nqr subunit, membrane protein	nqrD	-	1.6.5.8	ko:K00349	-	-	-	-	ko00000,ko01000	-	-	-	Rnf-Nqr
BYD3_k127_4379508_12	1349822.NSB1T_13715	1.546e-69	243.0	COG2869@1|root,COG2869@2|Bacteria,4NF7A@976|Bacteroidetes,2FMQM@200643|Bacteroidia,22XWP@171551|Porphyromonadaceae	976|Bacteroidetes	C	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol	nqrC	-	1.6.5.8	ko:K00348	-	-	-	-	ko00000,ko01000	-	-	-	FMN_bind
BYD3_k127_4379508_2	1433126.BN938_1407	1.371e-171	546.0	COG4658@1|root,COG4658@2|Bacteria,4NFGW@976|Bacteroidetes,2FMD0@200643|Bacteroidia,22U18@171550|Rikenellaceae	976|Bacteroidetes	C	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol	nqrB	-	1.6.5.8	ko:K00347	-	-	-	-	ko00000,ko01000	-	-	-	NQR2_RnfD_RnfE
BYD3_k127_4379508_3	869213.JCM21142_52253	2.144e-152	494.0	COG1726@1|root,COG1726@2|Bacteria,4NEDQ@976|Bacteroidetes,47M23@768503|Cytophagia	976|Bacteroidetes	C	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol	nqrA	-	1.6.5.8	ko:K00346	-	-	-	-	ko00000,ko01000	-	-	-	NQRA,NQRA_SLBB
BYD3_k127_4379508_14	1168034.FH5T_21800	3.028e-49	185.0	28HE2@1|root,2Z7QJ@2|Bacteria,4NFBA@976|Bacteroidetes,2FMTF@200643|Bacteroidia	976|Bacteroidetes	S	Domain of unknown function (DUF5103)	-	-	-	-	-	-	-	-	-	-	-	-	DUF5103
BYD3_k127_4379508_15	1168034.FH5T_21800	5.955e-34	136.0	28HE2@1|root,2Z7QJ@2|Bacteria,4NFBA@976|Bacteroidetes,2FMTF@200643|Bacteroidia	976|Bacteroidetes	S	Domain of unknown function (DUF5103)	-	-	-	-	-	-	-	-	-	-	-	-	DUF5103
BYD3_k127_4379508_0	742727.HMPREF9447_04497	6.406e-262	830.0	COG3250@1|root,COG3507@1|root,COG3250@2|Bacteria,COG3507@2|Bacteria,4NGZD@976|Bacteroidetes,2G08E@200643|Bacteroidia,4ANAP@815|Bacteroidaceae	976|Bacteroidetes	G	Belongs to the glycosyl hydrolase 2 family	-	-	3.2.1.23	ko:K01190	ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100	-	R01105,R01678,R03355,R04783,R06114	RC00049,RC00452	ko00000,ko00001,ko01000	-	-	-	DUF4982,Glyco_hydro_2,Glyco_hydro_2_C,Glyco_hydro_2_N,Glyco_hydro_43
BYD3_k127_4379508_4	517418.Ctha_1656	6.33e-129	414.0	COG0450@1|root,COG0450@2|Bacteria,1FDZ0@1090|Chlorobi	1090|Chlorobi	O	Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides	-	-	1.11.1.15	ko:K03386	ko04214,map04214	-	-	-	ko00000,ko00001,ko01000,ko04147	-	-	-	1-cysPrx_C,AhpC-TSA
BYD3_k127_4379508_17	1121373.KB903664_gene2597	4.99e-28	118.0	COG0735@1|root,COG0735@2|Bacteria,4NT7Y@976|Bacteroidetes,47RGY@768503|Cytophagia	976|Bacteroidetes	P	Belongs to the Fur family	-	-	-	ko:K09825	-	-	-	-	ko00000,ko03000	-	-	-	FUR
BYD3_k127_4379508_18	1089547.KB913013_gene1848	5.87e-24	103.0	COG3682@1|root,COG3682@2|Bacteria,4NSQR@976|Bacteroidetes,47R7N@768503|Cytophagia	976|Bacteroidetes	K	PFAM Penicillinase repressor	-	-	-	-	-	-	-	-	-	-	-	-	Penicillinase_R
BYD3_k127_4385078_6	572477.Alvin_2874	8.552e-110	384.0	COG0642@1|root,COG0784@1|root,COG0834@1|root,COG2198@1|root,COG3829@1|root,COG4191@1|root,COG0642@2|Bacteria,COG0784@2|Bacteria,COG0834@2|Bacteria,COG2198@2|Bacteria,COG3829@2|Bacteria,COG4191@2|Bacteria,1RCM9@1224|Proteobacteria,1T1YU@1236|Gammaproteobacteria,1X2TQ@135613|Chromatiales	135613|Chromatiales	T	Histidine Phosphotransfer domain	-	-	-	-	-	-	-	-	-	-	-	-	HATPase_c,HisKA,Hpt,PAS_3,Response_reg
BYD3_k127_4385078_9	1121285.AUFK01000017_gene3163	1.069e-11	72.0	29EN2@1|root,301K0@2|Bacteria,4PJY4@976|Bacteroidetes,1IM0B@117743|Flavobacteriia,3ZTID@59732|Chryseobacterium	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_4385078_7	927658.AJUM01000034_gene378	1.183e-74	265.0	COG2148@1|root,COG2148@2|Bacteria,4NER4@976|Bacteroidetes,2FNC2@200643|Bacteroidia,3XIYM@558415|Marinilabiliaceae	976|Bacteroidetes	M	CoA-binding domain	-	-	-	ko:K13012	-	-	-	-	ko00000,ko01005	-	-	-	Bac_transf,CoA_binding_3
BYD3_k127_4385078_3	1408473.JHXO01000007_gene788	4.545e-152	494.0	COG2176@1|root,COG2176@2|Bacteria,4PM8C@976|Bacteroidetes,2FW8F@200643|Bacteroidia	976|Bacteroidetes	L	GIY-YIG type nucleases (URI domain)	dnaQ	-	2.7.7.7	ko:K02342	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	M00260	R00375,R00376,R00377,R00378	RC02795	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	-	-	-	GIY-YIG,RNase_T
BYD3_k127_4385078_0	1121129.KB903359_gene1594	0.0	1649.0	COG0046@1|root,COG0047@1|root,COG0046@2|Bacteria,COG0047@2|Bacteria,4NETY@976|Bacteroidetes,2FM2Z@200643|Bacteroidia,22W21@171551|Porphyromonadaceae	976|Bacteroidetes	F	Phosphoribosylformylglycinamidine synthase involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate	purL	-	6.3.5.3	ko:K01952	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	M00048	R04463	RC00010,RC01160	ko00000,ko00001,ko00002,ko01000	-	-	-	AIRS_C,GATase_5
BYD3_k127_4385078_4	926561.KB900617_gene1574	3.747e-144	462.0	COG1897@1|root,COG1897@2|Bacteria,1TQVR@1239|Firmicutes,247NP@186801|Clostridia,3WBDQ@53433|Halanaerobiales	186801|Clostridia	E	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine	metAA	-	2.3.1.46	ko:K00651	ko00270,ko00920,ko01100,ko01110,ko01230,map00270,map00920,map01100,map01110,map01230	M00017	R01777	RC00004,RC00041	ko00000,ko00001,ko00002,ko01000	-	-	-	HTS
BYD3_k127_4385078_5	1168034.FH5T_06740	2.106e-117	389.0	COG0438@1|root,COG0438@2|Bacteria,4NETA@976|Bacteroidetes,2FPWJ@200643|Bacteroidia	976|Bacteroidetes	M	Psort location Cytoplasmic, score	-	-	-	-	-	-	-	-	-	-	-	-	Glyco_transf_4,Glycos_transf_1
BYD3_k127_4385078_2	1121904.ARBP01000026_gene668	1.758e-167	541.0	COG3172@1|root,COG3172@2|Bacteria,4NEQF@976|Bacteroidetes,47KCU@768503|Cytophagia	976|Bacteroidetes	H	Domain of unknown function (DUF4301)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4301
BYD3_k127_4385078_8	1305737.JAFX01000001_gene163	3.969e-24	110.0	2BBSK@1|root,325AS@2|Bacteria,4PMMM@976|Bacteroidetes,47XI1@768503|Cytophagia	976|Bacteroidetes	S	CarboxypepD_reg-like domain	-	-	-	-	-	-	-	-	-	-	-	-	CarbopepD_reg_2
BYD3_k127_4385078_1	1168034.FH5T_21195	9.594e-217	698.0	COG1629@1|root,COG1629@2|Bacteria,4NFFN@976|Bacteroidetes,2G3GJ@200643|Bacteroidia	976|Bacteroidetes	P	TonB-dependent receptor	-	-	-	-	-	-	-	-	-	-	-	-	CarbopepD_reg_2,Plug
BYD3_k127_439234_7	755732.Fluta_2666	1.939e-10	67.0	COG3427@1|root,COG3427@2|Bacteria,4PHJK@976|Bacteroidetes,1IGIK@117743|Flavobacteriia,2PB7C@246874|Cryomorphaceae	976|Bacteroidetes	E	oxidoreductase activity, acting on CH-OH group of donors	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_439234_2	886379.AEWI01000005_gene920	1.545e-82	280.0	COG0461@1|root,COG0461@2|Bacteria,4NEF8@976|Bacteroidetes,2FMTB@200643|Bacteroidia,3XJI3@558415|Marinilabiliaceae	976|Bacteroidetes	F	Phosphoribosyl transferase domain	pyrE	-	2.4.2.10,4.1.1.23	ko:K00762,ko:K13421	ko00240,ko00983,ko01100,map00240,map00983,map01100	M00051	R00965,R01870,R08231	RC00063,RC00409,RC00611	ko00000,ko00001,ko00002,ko01000	-	-	-	OMPdecase,Pribosyltran
BYD3_k127_439234_5	869213.JCM21142_271	1.022e-49	183.0	COG1051@1|root,COG1051@2|Bacteria,4NS9I@976|Bacteroidetes,47NQ9@768503|Cytophagia	976|Bacteroidetes	F	NUDIX domain	-	-	-	-	-	-	-	-	-	-	-	-	NUDIX
BYD3_k127_439234_3	869213.JCM21142_286	8.068e-77	274.0	COG0526@1|root,COG0526@2|Bacteria,4NNSW@976|Bacteroidetes	976|Bacteroidetes	CO	Thioredoxin-like	-	-	-	-	-	-	-	-	-	-	-	-	AhpC-TSA,Thioredoxin_8
BYD3_k127_439234_4	1168034.FH5T_09700	1.613e-57	205.0	COG0669@1|root,COG0669@2|Bacteria,4NM84@976|Bacteroidetes,2FT6A@200643|Bacteroidia	976|Bacteroidetes	H	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate	coaD	-	2.7.7.3	ko:K00954	ko00770,ko01100,map00770,map01100	M00120	R03035	RC00002	ko00000,ko00001,ko00002,ko01000	-	-	-	CTP_transf_like
BYD3_k127_439234_0	1408473.JHXO01000006_gene1191	0.0	1103.0	COG0466@1|root,COG0466@2|Bacteria,4NE1G@976|Bacteroidetes,2FNKR@200643|Bacteroidia	976|Bacteroidetes	O	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner	lon	-	3.4.21.53	ko:K01338	ko04112,map04112	-	-	-	ko00000,ko00001,ko01000,ko01002	-	-	-	AAA,LON_substr_bdg,Lon_C
BYD3_k127_439234_1	946077.W5A_04673	3.117e-132	432.0	COG1207@1|root,COG1207@2|Bacteria,4NDZP@976|Bacteroidetes,1HWW0@117743|Flavobacteriia	976|Bacteroidetes	M	glucose-1-phosphate thymidylyltransferase	glmU	-	-	-	-	-	-	-	-	-	-	-	NTP_transf_4
BYD3_k127_439234_6	1408473.JHXO01000006_gene1190	9.09e-40	149.0	COG0254@1|root,COG0254@2|Bacteria,4NS7P@976|Bacteroidetes,2FTUG@200643|Bacteroidia	976|Bacteroidetes	J	50S ribosomal protein L31 type B	rpmE2	-	-	ko:K02909	ko03010,map03010	M00178	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_L31
BYD3_k127_4413580_8	224911.27355209	3.664e-11	64.0	COG0409@1|root,COG0409@2|Bacteria,1MU1F@1224|Proteobacteria,2TSE4@28211|Alphaproteobacteria,3JVZM@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	O	Belongs to the HypD family	hypD	-	-	ko:K04654	-	-	-	-	ko00000	-	-	-	HypD
BYD3_k127_4413580_7	941824.TCEL_00204	9.603e-17	82.0	COG0298@1|root,COG0298@2|Bacteria,1VFE0@1239|Firmicutes,24UXU@186801|Clostridia,36NYN@31979|Clostridiaceae	186801|Clostridia	O	Hydrogenase assembly chaperone hypC hupF	hypC	-	-	ko:K04653	-	-	-	-	ko00000	-	-	-	HupF_HypC
BYD3_k127_4413580_0	999419.HMPREF1077_02991	4.828e-225	720.0	COG0068@1|root,COG0068@2|Bacteria,4NIZ1@976|Bacteroidetes,2FRRN@200643|Bacteroidia,22X9I@171551|Porphyromonadaceae	976|Bacteroidetes	O	Acylphosphatase	-	-	-	ko:K04656	-	-	-	-	ko00000	-	-	-	Acylphosphatase,Peptidase_M22,Sua5_yciO_yrdC,zf-HYPF
BYD3_k127_4413580_2	880526.KE386488_gene1532	4.986e-50	185.0	COG2344@1|root,COG2344@2|Bacteria,4NIIF@976|Bacteroidetes,2FKZF@200643|Bacteroidia,22UDN@171550|Rikenellaceae	976|Bacteroidetes	K	Modulates transcription in response to changes in cellular NADH NAD( ) redox state	rex	-	-	ko:K01926	-	-	-	-	ko00000,ko03000	-	-	-	CoA_binding,Put_DNA-bind_N
BYD3_k127_4413580_5	1408433.JHXV01000012_gene3975	8.404e-24	114.0	2ABBW@1|root,310SM@2|Bacteria,4PFE8@976|Bacteroidetes,1IG1J@117743|Flavobacteriia,2PBZZ@246874|Cryomorphaceae	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_4413580_9	1123277.KB893172_gene912	1.098e-10	68.0	2C2TP@1|root,33BV9@2|Bacteria,4NXY4@976|Bacteroidetes,47T6I@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_4413580_3	1121889.AUDM01000003_gene2458	4.324e-48	179.0	COG2253@1|root,COG2253@2|Bacteria,4NKE9@976|Bacteroidetes,1I35X@117743|Flavobacteriia,2NVU9@237|Flavobacterium	976|Bacteroidetes	S	Nucleotidyl transferase AbiEii toxin, Type IV TA system	-	-	-	-	-	-	-	-	-	-	-	-	AbiEii
BYD3_k127_4413580_1	744872.Spica_1885	8.829e-158	505.0	COG0686@1|root,COG0686@2|Bacteria,2J6R2@203691|Spirochaetes	203691|Spirochaetes	C	Belongs to the AlaDH PNT family	-	-	1.4.1.1	ko:K00259	ko00250,ko00430,ko01100,map00250,map00430,map01100	-	R00396	RC00008	ko00000,ko00001,ko01000	-	-	-	AlaDh_PNT_C,AlaDh_PNT_N
BYD3_k127_4413580_4	266264.Rmet_1522	2.231e-42	162.0	COG1894@1|root,COG1894@2|Bacteria,1MV8F@1224|Proteobacteria,2VHW2@28216|Betaproteobacteria,1K4IR@119060|Burkholderiaceae	28216|Betaproteobacteria	C	NADH-ubiquinone oxidoreductase-F iron-sulfur binding region	hoxF	GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464	1.12.1.2	ko:K18005	-	-	-	-	ko00000,ko01000	-	-	-	2Fe-2S_thioredx,Complex1_51K,NADH_4Fe-4S,SLBB
BYD3_k127_441686_15	1550091.JROE01000007_gene2740	5.327e-05	53.0	2CFJV@1|root,32T2Z@2|Bacteria,4NT7C@976|Bacteroidetes	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_441686_13	608538.HTH_0986	6.238e-21	94.0	COG0694@1|root,COG0694@2|Bacteria,2G59D@200783|Aquificae	200783|Aquificae	O	PFAM nitrogen-fixing NifU domain protein	-	-	-	-	-	-	-	-	-	-	-	-	NifU
BYD3_k127_441686_1	226186.BT_3895	4.114e-126	414.0	COG0489@1|root,COG0489@2|Bacteria,4NF5I@976|Bacteroidetes,2FKYK@200643|Bacteroidia,4AK6W@815|Bacteroidaceae	976|Bacteroidetes	D	Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP	mrp	-	-	ko:K03593	-	-	-	-	ko00000,ko03029,ko03036	-	-	-	FeS_assembly_P,ParA
BYD3_k127_441686_11	1408473.JHXO01000001_gene2272	2.992e-44	164.0	COG3695@1|root,COG3695@2|Bacteria,4NQ34@976|Bacteroidetes,2FT9F@200643|Bacteroidia	976|Bacteroidetes	L	6-O-methylguanine DNA methyltransferase, DNA binding domain protein	ogt	-	2.1.1.63	ko:K00567,ko:K07443	-	-	-	-	ko00000,ko01000,ko03400	-	-	-	DNA_binding_1
BYD3_k127_441686_6	1349822.NSB1T_03120	7.631e-84	284.0	COG0220@1|root,COG0220@2|Bacteria,4NG4V@976|Bacteroidetes,2FN8Z@200643|Bacteroidia,22WBB@171551|Porphyromonadaceae	976|Bacteroidetes	J	Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA	trmB	GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008176,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016423,GO:0016740,GO:0016741,GO:0030488,GO:0032259,GO:0032991,GO:0034470,GO:0034641,GO:0034660,GO:0034708,GO:0036265,GO:0043170,GO:0043412,GO:0043414,GO:0043527,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0106004,GO:0140098,GO:0140101,GO:1901360,GO:1902494,GO:1990234	2.1.1.33	ko:K03439	-	-	-	-	ko00000,ko01000,ko03016	-	-	-	Methyltransf_4
BYD3_k127_441686_12	1122226.AUHX01000006_gene2060	8.546e-25	109.0	2ADSH@1|root,313I2@2|Bacteria,4NQMU@976|Bacteroidetes,1I2XD@117743|Flavobacteriia	976|Bacteroidetes	S	Gliding motility-associated lipoprotein, GldH	gldH	GO:0006022,GO:0006026,GO:0006030,GO:0006032,GO:0006040,GO:0006807,GO:0006928,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009987,GO:0017144,GO:0040011,GO:0042737,GO:0043170,GO:0044237,GO:0044248,GO:0046348,GO:0048870,GO:0051179,GO:0051674,GO:0071704,GO:0071976,GO:1901071,GO:1901072,GO:1901135,GO:1901136,GO:1901564,GO:1901565,GO:1901575	-	-	-	-	-	-	-	-	-	-	GldH_lipo
BYD3_k127_441686_0	1168289.AJKI01000063_gene3501	2.032e-144	467.0	COG1774@1|root,COG1774@2|Bacteria,4NENX@976|Bacteroidetes,2FNYP@200643|Bacteroidia,3XJUN@558415|Marinilabiliaceae	976|Bacteroidetes	S	PSP1 C-terminal conserved region	yaaT	-	-	-	-	-	-	-	-	-	-	-	PSP1
BYD3_k127_441686_3	1168034.FH5T_09335	1.246e-97	342.0	COG4704@1|root,COG4704@2|Bacteria,4NGPF@976|Bacteroidetes,2FNAC@200643|Bacteroidia	976|Bacteroidetes	S	Bacterial Ig-like domain	-	-	-	-	-	-	-	-	-	-	-	-	Big_5,fn3_3
BYD3_k127_441686_7	1121373.KB903643_gene3498	3.855e-83	289.0	COG0682@1|root,COG0682@2|Bacteria,4NFP7@976|Bacteroidetes,47KQC@768503|Cytophagia	976|Bacteroidetes	M	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins	lgt	-	-	-	-	-	-	-	-	-	-	-	LGT
BYD3_k127_441686_5	1168034.FH5T_00710	2.542e-96	323.0	COG1230@1|root,COG1230@2|Bacteria,4NIHB@976|Bacteroidetes,2FNQ7@200643|Bacteroidia	976|Bacteroidetes	P	cation diffusion facilitator family transporter	czcD	-	-	ko:K16264	-	-	-	-	ko00000,ko02000	2.A.4.1	-	-	Cation_efflux
BYD3_k127_441686_14	1121904.ARBP01000002_gene7230	5.028e-12	68.0	COG0701@1|root,COG2608@1|root,COG0701@2|Bacteria,COG2608@2|Bacteria,4NDUJ@976|Bacteroidetes,47TYD@768503|Cytophagia	976|Bacteroidetes	P	Predicted permease	-	-	-	ko:K07089	-	-	-	-	ko00000	-	-	-	ArsP_1,HMA
BYD3_k127_441686_2	1191523.MROS_0684	3.14e-123	398.0	COG0588@1|root,COG0588@2|Bacteria	2|Bacteria	G	phosphoglycerate mutase activity	gpmA	GO:0001871,GO:0003674,GO:0003824,GO:0004619,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006006,GO:0006082,GO:0006090,GO:0006091,GO:0006094,GO:0006096,GO:0006109,GO:0006139,GO:0006140,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009894,GO:0009986,GO:0009987,GO:0010675,GO:0016051,GO:0016052,GO:0016053,GO:0016310,GO:0016853,GO:0016866,GO:0016868,GO:0017144,GO:0018130,GO:0019219,GO:0019220,GO:0019222,GO:0019318,GO:0019319,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0019752,GO:0030246,GO:0030247,GO:0031323,GO:0031329,GO:0032787,GO:0034248,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042866,GO:0043436,GO:0043455,GO:0043456,GO:0043470,GO:0043471,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046031,GO:0046034,GO:0046364,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046538,GO:0046700,GO:0046939,GO:0050789,GO:0050794,GO:0051171,GO:0051174,GO:0051186,GO:0051188,GO:0051193,GO:0051196,GO:0055086,GO:0060255,GO:0062012,GO:0065007,GO:0071704,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0080090,GO:0090407,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1902031,GO:2001065	5.4.2.11	ko:K01834	ko00010,ko00260,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko05230,map00010,map00260,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map05230	M00001,M00002,M00003	R01518	RC00536	ko00000,ko00001,ko00002,ko01000,ko04131,ko04147	-	-	-	His_Phos_1
BYD3_k127_441686_10	1237149.C900_04548	9.874e-48	180.0	COG4758@1|root,COG4758@2|Bacteria,4NQRE@976|Bacteroidetes,47R3Y@768503|Cytophagia	976|Bacteroidetes	S	Cell wall-active antibiotics response 4TMS YvqF	-	-	-	-	-	-	-	-	-	-	-	-	DUF2154
BYD3_k127_441686_8	1191523.MROS_0359	5.185e-83	287.0	COG2972@1|root,COG2972@2|Bacteria	2|Bacteria	T	Histidine kinase	-	-	-	-	-	-	-	-	-	-	-	-	HATPase_c_5,His_kinase
BYD3_k127_441686_9	153721.MYP_125	5.783e-81	276.0	COG3279@1|root,COG3279@2|Bacteria,4NEAH@976|Bacteroidetes,47KUT@768503|Cytophagia	976|Bacteroidetes	KT	Response regulator of the LytR AlgR family	-	-	-	ko:K02477	-	-	-	-	ko00000,ko02022	-	-	-	LytTR,Response_reg
BYD3_k127_441686_4	411901.BACCAC_03353	4.11e-97	331.0	COG0470@1|root,COG0470@2|Bacteria,4NEYF@976|Bacteroidetes,2FPCQ@200643|Bacteroidia,4AMUD@815|Bacteroidaceae	976|Bacteroidetes	L	COG2812 DNA polymerase III gamma tau subunits	holB	-	2.7.7.7	ko:K02341	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	M00260	R00375,R00376,R00377,R00378	RC02795	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	-	-	-	DNA_pol3_delta2
BYD3_k127_4424428_1	742767.HMPREF9456_01112	2.262e-262	822.0	COG1501@1|root,COG1501@2|Bacteria,4NE1H@976|Bacteroidetes,2FM4Z@200643|Bacteroidia,22W3H@171551|Porphyromonadaceae	976|Bacteroidetes	G	Belongs to the glycosyl hydrolase 31 family	-	GO:0000272,GO:0003674,GO:0003824,GO:0004553,GO:0005975,GO:0005976,GO:0006073,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009251,GO:0009987,GO:0010383,GO:0010410,GO:0010411,GO:0016052,GO:0016787,GO:0016798,GO:0043170,GO:0044036,GO:0044042,GO:0044237,GO:0044238,GO:0044260,GO:0044262,GO:0044264,GO:0044403,GO:0044419,GO:0051704,GO:0071554,GO:0071704,GO:0085030,GO:1901575,GO:2000895,GO:2000899	3.2.1.177	ko:K01811	-	-	-	-	ko00000,ko01000	-	GH31	-	DUF4968,DUF5110,Gal_mutarotas_2,Glyco_hydro_31,PA14
BYD3_k127_4424428_6	240015.ACP_1071	2.815e-30	125.0	COG1472@1|root,COG1472@2|Bacteria,3Y482@57723|Acidobacteria,2JINY@204432|Acidobacteriia	204432|Acidobacteriia	G	Fibronectin type III-like domain	-	-	3.2.1.21	ko:K05349	ko00460,ko00500,ko00940,ko01100,ko01110,map00460,map00500,map00940,map01100,map01110	-	R00026,R02558,R02887,R02985,R03527,R04949,R04998,R10035,R10039,R10040	RC00049,RC00059,RC00171,RC00262,RC00397,RC00451,RC00714,RC00746,RC01248	ko00000,ko00001,ko01000	-	GH3	-	Fn3-like,Glyco_hydro_3,Glyco_hydro_3_C
BYD3_k127_4424428_2	1123008.KB905693_gene1405	1.689e-230	723.0	COG3669@1|root,COG3669@2|Bacteria,4NEDX@976|Bacteroidetes,2FNFV@200643|Bacteroidia,22WIN@171551|Porphyromonadaceae	976|Bacteroidetes	G	F5 8 type C domain protein	-	-	3.2.1.51	ko:K01206	ko00511,map00511	-	-	-	ko00000,ko00001,ko01000,ko04147	-	GH29	-	Alpha_L_fucos,CHB_HEX_C_1,F5_F8_type_C,Fn3_assoc
BYD3_k127_4424428_3	742817.HMPREF9449_02814	6.588e-217	689.0	COG0366@1|root,COG0366@2|Bacteria,4NEXF@976|Bacteroidetes,2FMHS@200643|Bacteroidia,22W2Q@171551|Porphyromonadaceae	976|Bacteroidetes	G	Belongs to the glycosyl hydrolase 13 family	-	-	3.2.1.135	ko:K21575	-	-	-	-	ko00000,ko01000	-	GH13	-	Alpha-amylase,Cyc-maltodext_C,Cyc-maltodext_N
BYD3_k127_4424428_0	485918.Cpin_5087	7.952e-311	969.0	COG1554@1|root,COG1554@2|Bacteria,4NFG1@976|Bacteroidetes,1IRII@117747|Sphingobacteriia	976|Bacteroidetes	G	phosphorylase	-	-	2.4.1.8	ko:K00691	ko00500,ko01100,map00500,map01100	-	R01555	RC00049	ko00000,ko00001,ko01000	-	GH65	-	Glyco_hydro_65C,Glyco_hydro_65N,Glyco_hydro_65m
BYD3_k127_4424428_5	857293.CAAU_1523	3.939e-74	255.0	COG0637@1|root,COG0637@2|Bacteria,1UZE0@1239|Firmicutes,24DWR@186801|Clostridia,36GZ2@31979|Clostridiaceae	186801|Clostridia	S	haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED	pgmB	-	5.4.2.6	ko:K01838	ko00500,map00500	-	R02728,R11310	RC00408	ko00000,ko00001,ko01000	-	-	-	HAD_2
BYD3_k127_4424428_4	945713.IALB_1735	4.516e-211	667.0	COG2211@1|root,COG2211@2|Bacteria	2|Bacteria	G	Major facilitator Superfamily	malT	-	-	ko:K16211	-	-	-	-	ko00000,ko02000	2.A.2.6	-	-	MFS_1
BYD3_k127_4489306_1	316067.Geob_3570	7.847e-194	616.0	COG0467@1|root,COG0467@2|Bacteria,1NEWW@1224|Proteobacteria,42P4F@68525|delta/epsilon subdivisions,2WJVT@28221|Deltaproteobacteria	28221|Deltaproteobacteria	T	Pfam:KaiC	-	-	-	ko:K08482	-	-	-	-	ko00000	-	-	-	ATPase
BYD3_k127_4489306_5	521011.Mpal_1662	9.137e-38	144.0	COG0526@1|root,arCOG07612@2157|Archaea,2Y43J@28890|Euryarchaeota,2NB18@224756|Methanomicrobia	224756|Methanomicrobia	O	KaiB	-	-	-	ko:K08481	-	-	-	-	ko00000	-	-	-	KaiB
BYD3_k127_4489306_6	118168.MC7420_1714	1.373e-30	124.0	COG4251@1|root,COG4251@2|Bacteria,1G83Y@1117|Cyanobacteria,1HC7B@1150|Oscillatoriales	1117|Cyanobacteria	T	KaiB domain	-	-	-	ko:K08481	-	-	-	-	ko00000	-	-	-	KaiB
BYD3_k127_4489306_4	755178.Cyan10605_1125	8.964e-57	214.0	COG0642@1|root,COG2205@2|Bacteria,1G49F@1117|Cyanobacteria	1117|Cyanobacteria	T	Domain present in phytochromes and cGMP-specific phosphodiesterases.	-	-	-	-	-	-	-	-	-	-	-	-	GAF,HATPase_c,HisKA
BYD3_k127_4489306_3	1341155.FSS13T_18750	2.094e-85	288.0	COG0288@1|root,COG0288@2|Bacteria,4NH0X@976|Bacteroidetes,1HXY7@117743|Flavobacteriia,2NVS1@237|Flavobacterium	976|Bacteroidetes	P	Reversible hydration of carbon dioxide	-	-	4.2.1.1	ko:K01673	ko00910,map00910	-	R00132,R10092	RC02807	ko00000,ko00001,ko01000	-	-	-	Pro_CA
BYD3_k127_4489306_2	1191523.MROS_2624	8.015e-97	328.0	COG4225@1|root,COG4225@2|Bacteria	2|Bacteria	S	unsaturated chondroitin disaccharide hydrolase activity	-	-	3.2.1.172	ko:K15532	-	-	-	-	ko00000,ko01000	-	GH105	-	Glyco_hydro_88
BYD3_k127_4489306_7	1408473.JHXO01000014_gene4050	1.196e-21	103.0	2EU2T@1|root,33MJR@2|Bacteria,4NZIZ@976|Bacteroidetes	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_4489306_0	644968.DFW101_1041	2.87e-235	781.0	COG1352@1|root,COG5002@1|root,COG1352@2|Bacteria,COG5002@2|Bacteria,1R5EN@1224|Proteobacteria,42NK9@68525|delta/epsilon subdivisions,2WMCQ@28221|Deltaproteobacteria,2MH9G@213115|Desulfovibrionales	28221|Deltaproteobacteria	T	response regulator, receiver	-	-	2.1.1.80,3.1.1.61	ko:K13924	ko02020,ko02030,map02020,map02030	M00506	-	-	ko00000,ko00001,ko00002,ko01000,ko02022,ko02035	-	-	-	CheB_methylest,CheR,CheR_N,GAF_2,HATPase_c,HisKA,PAS,PAS_10,PAS_3,PAS_4,PAS_9,Response_reg,dCache_3
BYD3_k127_4541635_3	1250005.PHEL85_0335	2.085e-26	118.0	COG3595@1|root,COG3595@2|Bacteria,4NSAQ@976|Bacteroidetes,1I1B3@117743|Flavobacteriia,3VW6J@52959|Polaribacter	976|Bacteroidetes	S	Putative auto-transporter adhesin, head GIN domain	-	-	-	-	-	-	-	-	-	-	-	-	DUF2807
BYD3_k127_4541635_6	391596.PBAL39_11907	3.2e-13	81.0	COG3595@1|root,COG3595@2|Bacteria,4NEUW@976|Bacteroidetes,1IWQV@117747|Sphingobacteriia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_4541635_2	760192.Halhy_3536	4.202e-57	204.0	COG1595@1|root,COG1595@2|Bacteria,4NMAK@976|Bacteroidetes,1ISGD@117747|Sphingobacteriia	976|Bacteroidetes	K	PFAM RNA polymerase sigma factor 70, region 4 type 2	-	-	-	ko:K03088	-	-	-	-	ko00000,ko03021	-	-	-	Sigma70_r2,Sigma70_r4_2
BYD3_k127_4541635_5	1239962.C943_01473	1.362e-15	82.0	COG3011@1|root,COG3011@2|Bacteria,4NQ93@976|Bacteroidetes,47R74@768503|Cytophagia	976|Bacteroidetes	S	Protein of unknown function, DUF393	yuxK	-	-	-	-	-	-	-	-	-	-	-	DUF393
BYD3_k127_4541635_0	644282.Deba_2975	5.562e-132	437.0	COG0477@1|root,COG2814@2|Bacteria,1NU31@1224|Proteobacteria,43CB2@68525|delta/epsilon subdivisions,2X7MH@28221|Deltaproteobacteria	28221|Deltaproteobacteria	EGP	Major facilitator superfamily MFS_1	-	-	-	-	-	-	-	-	-	-	-	-	MFS_1
BYD3_k127_4541635_1	1168034.FH5T_11800	6.181e-66	242.0	COG0204@1|root,COG0204@2|Bacteria,4NN7X@976|Bacteroidetes,2FUAF@200643|Bacteroidia	976|Bacteroidetes	I	Phosphate acyltransferases	-	-	-	-	-	-	-	-	-	-	-	-	Acyltransferase
BYD3_k127_4553910_1	945713.IALB_2157	5.018e-249	784.0	COG1297@1|root,COG1297@2|Bacteria	2|Bacteria	S	iron-nicotianamine transmembrane transporter activity	oliA	GO:0003674,GO:0005215,GO:0005575,GO:0006810,GO:0008150,GO:0016020,GO:0022857,GO:0051179,GO:0051234,GO:0055085	-	-	-	-	-	-	-	-	-	-	OPT
BYD3_k127_4553910_18	485918.Cpin_5469	2.136e-44	166.0	COG0105@1|root,COG0105@2|Bacteria,4NM5B@976|Bacteroidetes,1ISC1@117747|Sphingobacteriia	976|Bacteroidetes	F	Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate	ndk	-	2.7.4.6	ko:K00940	ko00230,ko00240,ko00983,ko01100,ko01110,ko01130,ko04016,map00230,map00240,map00983,map01100,map01110,map01130,map04016	M00049,M00050,M00052,M00053	R00124,R00139,R00156,R00330,R00570,R00722,R01137,R01857,R02093,R02326,R02331,R03530,R11894,R11895	RC00002	ko00000,ko00001,ko00002,ko01000,ko04131	-	-	-	NDK
BYD3_k127_4553910_11	1408473.JHXO01000007_gene969	5.315e-99	334.0	COG0618@1|root,COG0618@2|Bacteria,4NEXE@976|Bacteroidetes,2FP4J@200643|Bacteroidia	976|Bacteroidetes	M	DHH family	nrnA	-	3.1.13.3,3.1.3.7	ko:K06881	ko00920,ko01100,ko01120,map00920,map01100,map01120	-	R00188,R00508	RC00078	ko00000,ko00001,ko01000,ko03400	-	-	-	DHH,DHHA1
BYD3_k127_4553910_19	385682.AFSL01000088_gene874	1.682e-40	155.0	COG0545@1|root,COG0545@2|Bacteria,4NV96@976|Bacteroidetes,2FZV9@200643|Bacteroidia,3XK5D@558415|Marinilabiliaceae	976|Bacteroidetes	O	FKBP-type peptidyl-prolyl cis-trans isomerase	-	-	-	-	-	-	-	-	-	-	-	-	FKBP_C
BYD3_k127_4553910_20	1185876.BN8_05462	2.203e-32	137.0	COG0545@1|root,COG0545@2|Bacteria,4NDW4@976|Bacteroidetes,47KIJ@768503|Cytophagia	976|Bacteroidetes	O	Peptidyl-prolyl cis-trans isomerase	ppiB	-	5.2.1.8	ko:K01802,ko:K03767	ko01503,ko04217,map01503,map04217	-	-	-	ko00000,ko00001,ko01000,ko03110,ko04147	-	-	-	FKBP_C,Pro_isomerase
BYD3_k127_4553910_24	643867.Ftrac_2532	1.856e-06	54.0	COG0545@1|root,COG0545@2|Bacteria,4NQJS@976|Bacteroidetes	976|Bacteroidetes	O	Peptidyl-prolyl cis-trans isomerase	-	-	5.2.1.8	ko:K03772	-	-	-	-	ko00000,ko01000,ko03110	-	-	-	FKBP_C
BYD3_k127_4553910_15	1125725.HMPREF1325_0266	4.051e-70	244.0	COG0313@1|root,COG0313@2|Bacteria,2J6E9@203691|Spirochaetes	203691|Spirochaetes	H	Uroporphyrin-III C tetrapyrrole (Corrin Porphyrin) methyltransferase	-	-	2.1.1.198	ko:K07056	-	-	-	-	ko00000,ko01000,ko03009	-	-	-	TP_methylase
BYD3_k127_4553910_6	886379.AEWI01000012_gene1140	4.534e-151	523.0	COG0642@1|root,COG3292@1|root,COG2205@2|Bacteria,COG3292@2|Bacteria,4NDXU@976|Bacteroidetes,2FX61@200643|Bacteroidia,3XKI8@558415|Marinilabiliaceae	976|Bacteroidetes	T	His Kinase A (phosphoacceptor) domain	-	-	-	-	-	-	-	-	-	-	-	-	HATPase_c,HTH_18,HisKA,Reg_prop,Response_reg,Y_Y_Y
BYD3_k127_4553910_17	1121875.KB907556_gene595	1.122e-46	179.0	COG3204@1|root,COG3204@2|Bacteria,4NJBU@976|Bacteroidetes,1HZA5@117743|Flavobacteriia	976|Bacteroidetes	L	pilus organization	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_4553910_9	1168034.FH5T_11810	5.886e-124	407.0	COG1785@1|root,COG1785@2|Bacteria,4NG3D@976|Bacteroidetes,2FMNA@200643|Bacteroidia	976|Bacteroidetes	P	Belongs to the alkaline phosphatase family	phoA	-	3.1.3.1	ko:K01077	ko00730,ko00790,ko01100,ko02020,map00730,map00790,map01100,map02020	M00126	R02135,R04620	RC00017	ko00000,ko00001,ko00002,ko00537,ko01000,ko04147	-	-	-	Alk_phosphatase
BYD3_k127_4553910_22	203275.BFO_2279	3.741e-26	108.0	COG1773@1|root,COG1773@2|Bacteria,4NHF0@976|Bacteroidetes,2FUN6@200643|Bacteroidia,22YNA@171551|Porphyromonadaceae	976|Bacteroidetes	C	Rubredoxin	rubR	-	-	-	-	-	-	-	-	-	-	-	Rubredoxin
BYD3_k127_4553910_4	869213.JCM21142_3880	1.654e-184	588.0	COG2195@1|root,COG2195@2|Bacteria,4NG8I@976|Bacteroidetes	976|Bacteroidetes	E	Xaa-His dipeptidase	pepD_1	-	-	ko:K01270	ko00480,ko01100,map00480,map01100	-	R00899,R04951	RC00096,RC00141	ko00000,ko00001,ko01000,ko01002	-	-	-	M20_dimer,Peptidase_M20
BYD3_k127_4553910_3	869213.JCM21142_3823	5.763e-203	647.0	COG0471@1|root,COG0569@1|root,COG0471@2|Bacteria,COG0569@2|Bacteria,4NF52@976|Bacteroidetes,47NEH@768503|Cytophagia	976|Bacteroidetes	P	COGs COG0471 Di- and tricarboxylate transporter	-	-	-	-	-	-	-	-	-	-	-	-	CitMHS,TrkA_C
BYD3_k127_4553910_10	1047013.AQSP01000115_gene352	7.439e-118	389.0	COG0454@1|root,COG0456@2|Bacteria,2NNUP@2323|unclassified Bacteria	2|Bacteria	K	acetyltransferase	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_4553910_23	123214.PERMA_1066	1.724e-14	74.0	COG1522@1|root,COG1522@2|Bacteria,2G5DY@200783|Aquificae	200783|Aquificae	K	Winged helix-turn-helix DNA-binding	-	-	-	-	-	-	-	-	-	-	-	-	HTH_24
BYD3_k127_4553910_0	203275.BFO_1640	5.777e-252	791.0	COG0018@1|root,COG0018@2|Bacteria,4NE7Q@976|Bacteroidetes,2FN06@200643|Bacteroidia,22VUX@171551|Porphyromonadaceae	976|Bacteroidetes	J	Arginyl-tRNA synthetase	argS	-	6.1.1.19	ko:K01887	ko00970,map00970	M00359,M00360	R03646	RC00055,RC00523	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029	-	-	-	Arg_tRNA_synt_N,DALR_1,tRNA-synt_1d
BYD3_k127_4553910_2	869213.JCM21142_41869	2.749e-221	692.0	COG0541@1|root,COG0541@2|Bacteria,4NDZ2@976|Bacteroidetes,47MYD@768503|Cytophagia	976|Bacteroidetes	U	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY	ffh	-	3.6.5.4	ko:K03106	ko02024,ko03060,ko03070,map02024,map03060,map03070	M00335	-	-	ko00000,ko00001,ko00002,ko01000,ko02044	3.A.5.1,3.A.5.2,3.A.5.7,3.A.5.8,3.A.5.9	-	-	SRP54,SRP54_N,SRP_SPB
BYD3_k127_4553910_7	1123008.KB905692_gene87	4.501e-139	446.0	COG0190@1|root,COG0190@2|Bacteria,4NEJP@976|Bacteroidetes,2FMNT@200643|Bacteroidia,22X77@171551|Porphyromonadaceae	976|Bacteroidetes	F	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate	folD	GO:0003674,GO:0003824,GO:0004477,GO:0004488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006730,GO:0008150,GO:0008152,GO:0009987,GO:0016491,GO:0016645,GO:0016646,GO:0016787,GO:0016810,GO:0016814,GO:0019238,GO:0044237,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0055114	1.5.1.5,3.5.4.9	ko:K01491	ko00670,ko00720,ko01100,ko01120,ko01200,map00670,map00720,map01100,map01120,map01200	M00140,M00377	R01220,R01655	RC00202,RC00578	ko00000,ko00001,ko00002,ko01000	-	-	-	THF_DHG_CYH,THF_DHG_CYH_C
BYD3_k127_4553910_16	761193.Runsl_5164	3.436e-55	212.0	COG0457@1|root,COG0457@2|Bacteria,4NG1I@976|Bacteroidetes,47M8A@768503|Cytophagia	976|Bacteroidetes	NU	PFAM Tetratricopeptide repeat	-	-	-	-	-	-	-	-	-	-	-	-	TPR_1,TPR_16,TPR_19,TPR_2,TPR_6,TPR_7,TPR_8
BYD3_k127_4553910_12	385682.AFSL01000102_gene62	4.108e-93	313.0	COG1809@1|root,COG1809@2|Bacteria,4NEHT@976|Bacteroidetes,2G25S@200643|Bacteroidia,3XJZT@558415|Marinilabiliaceae	976|Bacteroidetes	S	(2R)-phospho-3-sulfolactate synthase (ComA)	-	-	4.4.1.19	ko:K08097	ko00680,ko01120,map00680,map01120	M00358	R07476	RC01799	ko00000,ko00001,ko00002,ko01000	-	-	-	ComA
BYD3_k127_4553910_13	743722.Sph21_1339	4.401e-83	283.0	COG0169@1|root,COG0169@2|Bacteria,4NEBJ@976|Bacteroidetes,1IPMJ@117747|Sphingobacteriia	976|Bacteroidetes	E	PFAM Shikimate dehydrogenase substrate binding	aroE	-	1.1.1.25	ko:K00014	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	M00022	R02413	RC00206	ko00000,ko00001,ko00002,ko01000	-	-	-	Shikimate_dh_N
BYD3_k127_4553910_21	385682.AFSL01000006_gene2376	5.678e-31	128.0	COG0642@1|root,COG2205@2|Bacteria,4NX2D@976|Bacteroidetes,2G28Q@200643|Bacteroidia,3XKD2@558415|Marinilabiliaceae	976|Bacteroidetes	T	Domain of unknown function (DUF4154)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4154
BYD3_k127_4553910_14	1168034.FH5T_13710	7.217e-80	274.0	COG0101@1|root,COG0101@2|Bacteria,4NFDC@976|Bacteroidetes,2FP2H@200643|Bacteroidia	976|Bacteroidetes	J	Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs	truA	GO:0001522,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016853,GO:0016866,GO:0031119,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:1901360	5.4.99.12	ko:K06173	-	-	-	-	ko00000,ko01000,ko03016	-	-	-	PseudoU_synth_1
BYD3_k127_4553910_5	1121129.KB903359_gene1252	1.205e-159	509.0	COG0714@1|root,COG0714@2|Bacteria,4NDVZ@976|Bacteroidetes,2FMGP@200643|Bacteroidia,22W2U@171551|Porphyromonadaceae	976|Bacteroidetes	S	ATPase family associated with various cellular activities (AAA)	moxR	-	-	ko:K03924	-	-	-	-	ko00000,ko01000	-	-	-	AAA_3
BYD3_k127_4553910_8	1168034.FH5T_13685	2.223e-124	404.0	COG1721@1|root,COG1721@2|Bacteria,4NE2N@976|Bacteroidetes,2FNSY@200643|Bacteroidia	976|Bacteroidetes	S	protein (some members contain a von Willebrand factor type A (vWA) domain)	-	-	-	-	-	-	-	-	-	-	-	-	DUF58
BYD3_k127_4573512_0	435591.BDI_0277	7.753e-202	642.0	COG2091@1|root,COG2091@2|Bacteria,4NFQ6@976|Bacteroidetes,2FS4M@200643|Bacteroidia,2309R@171551|Porphyromonadaceae	976|Bacteroidetes	H	lysine biosynthetic process via aminoadipic acid	-	-	-	-	-	-	-	-	-	-	-	-	CBM9_1
BYD3_k127_4585104_0	1168034.FH5T_21730	1.635e-288	900.0	COG0280@1|root,COG0281@1|root,COG0280@2|Bacteria,COG0281@2|Bacteria,4NFUJ@976|Bacteroidetes,2FM2T@200643|Bacteroidia	976|Bacteroidetes	C	Psort location Cytoplasmic, score	maeB	-	1.1.1.38,1.1.1.40	ko:K00027,ko:K00029	ko00620,ko00710,ko01100,ko01120,ko01200,ko02020,map00620,map00710,map01100,map01120,map01200,map02020	M00169,M00172	R00214,R00216	RC00105	ko00000,ko00001,ko00002,ko01000	-	-	-	Malic_M,PTA_PTB,malic
BYD3_k127_4585104_6	1237149.C900_02648	1.07e-97	329.0	COG1131@1|root,COG1131@2|Bacteria,4NFNM@976|Bacteroidetes,47Q1V@768503|Cytophagia	976|Bacteroidetes	V	AAA domain, putative AbiEii toxin, Type IV TA system	-	-	-	ko:K01990	-	M00254	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	ABC_tran
BYD3_k127_4585104_9	1237149.C900_02649	9.52e-55	202.0	COG1277@1|root,COG1277@2|Bacteria,4NEES@976|Bacteroidetes,47WZW@768503|Cytophagia	976|Bacteroidetes	S	Excinuclease ABC subunit B	-	-	-	-	-	-	-	-	-	-	-	-	ABC2_membrane_2,ABC2_membrane_4
BYD3_k127_4585104_5	1168034.FH5T_20475	8.223e-99	334.0	COG0438@1|root,COG0438@2|Bacteria,4NH7K@976|Bacteroidetes,2FSCQ@200643|Bacteroidia	976|Bacteroidetes	M	Glycosyl transferases group 1	-	-	-	-	-	-	-	-	-	-	-	-	Glyco_trans_1_4,Glyco_transf_4,Glycos_transf_1
BYD3_k127_4585104_4	761193.Runsl_0966	2.026e-106	354.0	COG0812@1|root,COG0812@2|Bacteria,4NE78@976|Bacteroidetes,47KJJ@768503|Cytophagia	976|Bacteroidetes	M	Cell wall formation	murB	-	1.3.1.98	ko:K00075	ko00520,ko00550,ko01100,map00520,map00550,map01100	-	R03191,R03192	RC02639	ko00000,ko00001,ko01000,ko01011	-	-	-	FAD_binding_4,MurB_C
BYD3_k127_4585104_7	575590.HMPREF0156_01678	1.266e-83	291.0	COG2374@1|root,COG2374@2|Bacteria,4NEHG@976|Bacteroidetes	976|Bacteroidetes	S	Endonuclease exonuclease phosphatase family	-	-	-	-	-	-	-	-	-	-	-	-	Exo_endo_phos
BYD3_k127_4585104_3	1408473.JHXO01000011_gene3022	8.348e-107	364.0	2DB82@1|root,2Z7PX@2|Bacteria,4NEW5@976|Bacteroidetes,2FMDV@200643|Bacteroidia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	Beta_helix
BYD3_k127_4585104_11	1121912.AUHD01000003_gene3070	2.327e-25	111.0	COG0454@1|root,COG0456@2|Bacteria,4NPA8@976|Bacteroidetes,1I18M@117743|Flavobacteriia	976|Bacteroidetes	K	PFAM GCN5-related N-acetyltransferase	-	-	-	-	-	-	-	-	-	-	-	-	Acetyltransf_1
BYD3_k127_4585104_1	390874.Tpet_0358	2.4e-279	873.0	COG0500@1|root,COG1181@1|root,COG1181@2|Bacteria,COG2226@2|Bacteria,2GBZA@200918|Thermotogae	200918|Thermotogae	F	Belongs to the D-alanine--D-alanine ligase family	-	-	6.3.2.4	ko:K01921	ko00473,ko00550,ko01100,ko01502,map00473,map00550,map01100,map01502	-	R01150	RC00064,RC00141	ko00000,ko00001,ko01000,ko01011	-	-	-	Dala_Dala_lig_C,Methyltransf_25
BYD3_k127_4585104_2	742817.HMPREF9449_02798	1.396e-171	544.0	COG1899@1|root,COG1899@2|Bacteria,4NEZ0@976|Bacteroidetes,2FW0G@200643|Bacteroidia,2300H@171551|Porphyromonadaceae	976|Bacteroidetes	O	Deoxyhypusine synthase	dys1	-	2.5.1.46	ko:K00809	-	-	-	-	ko00000,ko01000	-	-	-	DS
BYD3_k127_4585104_8	1250232.JQNJ01000001_gene172	7.04e-66	231.0	COG0053@1|root,COG0053@2|Bacteria,4NJRM@976|Bacteroidetes,1HXI5@117743|Flavobacteriia	976|Bacteroidetes	P	Cation efflux family	-	-	-	-	-	-	-	-	-	-	-	-	Cation_efflux
BYD3_k127_4585104_10	1120965.AUBV01000003_gene508	1.252e-26	115.0	COG1510@1|root,COG1510@2|Bacteria,4NSVR@976|Bacteroidetes,47RNX@768503|Cytophagia	976|Bacteroidetes	K	regulation of RNA biosynthetic process	-	-	-	-	-	-	-	-	-	-	-	-	HTH_5,MarR_2
BYD3_k127_4585104_13	926549.KI421517_gene2179	1.079e-12	75.0	COG1538@1|root,COG1538@2|Bacteria,4NF4X@976|Bacteroidetes,47KE9@768503|Cytophagia	976|Bacteroidetes	MU	PFAM Outer membrane efflux protein	-	-	-	-	-	-	-	-	-	-	-	-	OEP
BYD3_k127_4590696_11	309803.CTN_1829	1.505e-23	105.0	COG0500@1|root,COG2226@2|Bacteria,2GEE8@200918|Thermotogae	200918|Thermotogae	H	Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2)	menG	-	2.1.1.163,2.1.1.201	ko:K03183	ko00130,ko01100,ko01110,map00130,map01100,map01110	M00116,M00117	R04990,R04993,R06859,R08774,R09736	RC00003,RC01253,RC01662	ko00000,ko00001,ko00002,ko01000	-	-	-	Ubie_methyltran
BYD3_k127_4590696_10	991.IW20_23220	2.025e-34	136.0	COG2050@1|root,COG2050@2|Bacteria,4NNYG@976|Bacteroidetes,1I2BT@117743|Flavobacteriia,2NVWV@237|Flavobacterium	976|Bacteroidetes	Q	thioesterase	ydiI	-	3.1.2.28	ko:K19222	ko00130,ko01100,ko01110,map00130,map01100,map01110	M00116	R07262	RC00004,RC00174	ko00000,ko00001,ko00002,ko01000	-	-	-	4HBT,Hydrolase_3
BYD3_k127_4590696_9	177439.DP0254	2.769e-70	252.0	COG1169@1|root,COG1169@2|Bacteria,1MVB7@1224|Proteobacteria,42S21@68525|delta/epsilon subdivisions,2WNRS@28221|Deltaproteobacteria,2MNJB@213118|Desulfobacterales	28221|Deltaproteobacteria	HQ	chorismate binding enzyme	menF	-	5.4.4.2	ko:K01851,ko:K02361,ko:K02552	ko00130,ko01053,ko01100,ko01110,ko01130,map00130,map01053,map01100,map01110,map01130	M00116	R01717	RC00588	ko00000,ko00001,ko00002,ko01000	-	-	-	Chorismate_bind
BYD3_k127_4590696_4	1168034.FH5T_14575	7.244e-116	392.0	COG1165@1|root,COG1165@2|Bacteria,4NETZ@976|Bacteroidetes,2FMSK@200643|Bacteroidia	976|Bacteroidetes	H	Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate (SEPHCHC)	menD	-	2.2.1.9	ko:K02551	ko00130,ko01100,ko01110,map00130,map01100,map01110	M00116	R08165	RC02186	ko00000,ko00001,ko00002,ko01000	-	-	-	TPP_enzyme_C,TPP_enzyme_M_2,TPP_enzyme_N
BYD3_k127_4590696_3	693979.Bache_2743	2.126e-149	475.0	COG0447@1|root,COG0447@2|Bacteria,4NDXT@976|Bacteroidetes,2FMME@200643|Bacteroidia,4AMMS@815|Bacteroidaceae	976|Bacteroidetes	H	Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)	menB	-	4.1.3.36	ko:K01661	ko00130,ko01100,ko01110,map00130,map01100,map01110	M00116	R07263	RC01923	ko00000,ko00001,ko00002,ko01000	-	-	-	ECH_1
BYD3_k127_4590696_7	694427.Palpr_1531	2.37e-87	297.0	COG1575@1|root,COG1575@2|Bacteria,4NGCJ@976|Bacteroidetes,2FMMX@200643|Bacteroidia,22XUQ@171551|Porphyromonadaceae	976|Bacteroidetes	H	Belongs to the MenA family. Type 1 subfamily	menA	-	2.5.1.74	ko:K02548	ko00130,ko01100,ko01110,map00130,map01100,map01110	M00116	R05617,R06858,R10757	RC02935,RC02936,RC03264	ko00000,ko00001,ko00002,ko01000,ko01006	-	-	-	UbiA
BYD3_k127_4590696_6	709991.Odosp_0384	8.632e-108	360.0	COG4948@1|root,COG4948@2|Bacteria,4NEBX@976|Bacteroidetes,2FMXR@200643|Bacteroidia,22X1A@171551|Porphyromonadaceae	976|Bacteroidetes	M	Mandelate racemase muconate lactonizing enzyme	menC	-	-	-	-	-	-	-	-	-	-	-	MR_MLE_C
BYD3_k127_4590696_8	694427.Palpr_1529	1.215e-73	260.0	COG0318@1|root,COG0318@2|Bacteria,4NEXK@976|Bacteroidetes,2FM16@200643|Bacteroidia,22X5D@171551|Porphyromonadaceae	976|Bacteroidetes	IQ	O-succinylbenzoic acid--CoA ligase	menE	-	6.2.1.26	ko:K01911	ko00130,ko01100,ko01110,map00130,map01100,map01110	M00116	R04030	RC00004,RC00014	ko00000,ko00001,ko00002,ko01000	-	-	-	AMP-binding,AMP-binding_C
BYD3_k127_4590696_5	1450525.JATV01000016_gene2955	3.749e-113	372.0	COG0330@1|root,COG0330@2|Bacteria,4NFNB@976|Bacteroidetes,1IEI1@117743|Flavobacteriia,2NUF7@237|Flavobacterium	976|Bacteroidetes	O	prohibitin homologues	-	-	-	-	-	-	-	-	-	-	-	-	Band_7
BYD3_k127_4590696_0	1408473.JHXO01000009_gene3460	7.627e-293	909.0	COG3525@1|root,COG3525@2|Bacteria,4NE08@976|Bacteroidetes,2FRAU@200643|Bacteroidia	976|Bacteroidetes	G	Fn3 associated	-	-	3.2.1.52	ko:K12373	ko00511,ko00513,ko00520,ko00531,ko00603,ko00604,ko01100,ko04142,map00511,map00513,map00520,map00531,map00603,map00604,map01100,map04142	M00079	R00022,R06004,R11316	RC00049	ko00000,ko00001,ko00002,ko01000,ko03110	-	GH20	-	Fn3_assoc,Glyco_hydro_20,Glyco_hydro_20b
BYD3_k127_4590696_1	1123057.P872_02175	1.345e-225	708.0	COG0823@1|root,COG0823@2|Bacteria,4NG4S@976|Bacteroidetes,47KMG@768503|Cytophagia	976|Bacteroidetes	U	WD40-like Beta Propeller Repeat	-	-	-	-	-	-	-	-	-	-	-	-	PD40
BYD3_k127_4590696_12	658187.LDG_8333	4.446e-05	54.0	COG0515@1|root,COG0515@2|Bacteria,1P0KJ@1224|Proteobacteria,1SRFS@1236|Gammaproteobacteria,1JECU@118969|Legionellales	118969|Legionellales	KLT	Protein of unknown function (DUF1566)	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_4590696_2	1336803.PHEL49_1329	1.708e-154	503.0	COG3537@1|root,COG3537@2|Bacteria,4NDYB@976|Bacteroidetes,1HWR3@117743|Flavobacteriia,3VW0S@52959|Polaribacter	976|Bacteroidetes	G	Glycosyl hydrolase family 92	-	-	-	-	-	-	-	-	-	-	-	-	Glyco_hydro_92
BYD3_k127_4606787_1	998088.B565_3321	3.207e-91	306.0	COG1940@1|root,COG1940@2|Bacteria,1NSQA@1224|Proteobacteria,1S0A5@1236|Gammaproteobacteria,1Y45P@135624|Aeromonadales	135624|Aeromonadales	GK	ROK family	-	-	2.7.1.63	ko:K00886	ko00010,ko00520,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00520,map01100,map01110,map01120,map01130,map01200	M00001,M00549	R02187,R02189	RC00017	ko00000,ko00001,ko00002,ko01000	-	-	-	ROK
BYD3_k127_4606787_2	667015.Bacsa_1026	5.903e-91	302.0	COG0353@1|root,COG0353@2|Bacteria,4NEWI@976|Bacteroidetes,2FM1C@200643|Bacteroidia,4AKI1@815|Bacteroidaceae	976|Bacteroidetes	L	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO	recR	-	-	ko:K06187	ko03440,map03440	-	-	-	ko00000,ko00001,ko03400	-	-	-	RecR,Toprim_4
BYD3_k127_4606787_0	1121904.ARBP01000004_gene1065	5.569e-153	497.0	COG0591@1|root,COG0591@2|Bacteria,4NEF3@976|Bacteroidetes,47KNW@768503|Cytophagia	976|Bacteroidetes	E	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family	-	-	-	-	-	-	-	-	-	-	-	-	SSF
BYD3_k127_4612973_9	1121434.AULY01000014_gene2708	1.583e-08	59.0	COG0457@1|root,COG0457@2|Bacteria,1PER6@1224|Proteobacteria,42WBV@68525|delta/epsilon subdivisions,2WSBP@28221|Deltaproteobacteria,2MDCI@213115|Desulfovibrionales	28221|Deltaproteobacteria	S	Tetratricopeptide repeat	-	-	-	-	-	-	-	-	-	-	-	-	TPR_1,TPR_16,TPR_2,TPR_6,TPR_8
BYD3_k127_4612973_0	1168034.FH5T_21745	4.469e-212	678.0	COG1216@1|root,COG1216@2|Bacteria,4NFW5@976|Bacteroidetes,2FQ14@200643|Bacteroidia	976|Bacteroidetes	S	Glycosyltransferase, group 2 family protein	wbbL	-	-	ko:K07011	-	-	-	-	ko00000	-	-	-	CoA_binding_3,Glyco_tranf_2_3,Glycos_transf_2
BYD3_k127_4612973_1	468059.AUHA01000003_gene1779	5.939e-117	390.0	COG0508@1|root,COG0508@2|Bacteria,4NED0@976|Bacteroidetes,1IP3U@117747|Sphingobacteriia	976|Bacteroidetes	C	Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex	bfmBB	-	2.3.1.61	ko:K00658	ko00020,ko00310,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00310,map01100,map01110,map01120,map01130,map01200	M00009,M00011,M00032	R02570,R02571,R08549	RC00004,RC02727,RC02833	br01601,ko00000,ko00001,ko00002,ko01000	-	-	-	2-oxoacid_dh,Biotin_lipoyl,E3_binding
BYD3_k127_4612973_2	153721.MYP_243	2.195e-79	299.0	COG0823@1|root,COG2885@1|root,COG0823@2|Bacteria,COG2885@2|Bacteria,4NHCE@976|Bacteroidetes,47NZ4@768503|Cytophagia	976|Bacteroidetes	MU	OmpA family	-	-	-	-	-	-	-	-	-	-	-	-	OmpA,PD40,TPR_11,TPR_16
BYD3_k127_4612973_4	1313301.AUGC01000016_gene871	1.058e-70	264.0	COG0823@1|root,COG2885@1|root,COG0823@2|Bacteria,COG2885@2|Bacteria,4NHCE@976|Bacteroidetes	976|Bacteroidetes	MU	OmpA family	-	-	-	-	-	-	-	-	-	-	-	-	OmpA,PD40,TPR_11,TPR_16
BYD3_k127_4612973_3	153721.MYP_243	5.578e-79	288.0	COG0823@1|root,COG2885@1|root,COG0823@2|Bacteria,COG2885@2|Bacteria,4NHCE@976|Bacteroidetes,47NZ4@768503|Cytophagia	976|Bacteroidetes	MU	OmpA family	-	-	-	-	-	-	-	-	-	-	-	-	OmpA,PD40,TPR_11,TPR_16
BYD3_k127_4612973_5	153721.MYP_243	6.367e-64	235.0	COG0823@1|root,COG2885@1|root,COG0823@2|Bacteria,COG2885@2|Bacteria,4NHCE@976|Bacteroidetes,47NZ4@768503|Cytophagia	976|Bacteroidetes	MU	OmpA family	-	-	-	-	-	-	-	-	-	-	-	-	OmpA,PD40,TPR_11,TPR_16
BYD3_k127_4612973_6	385682.AFSL01000002_gene1861	3.124e-59	210.0	COG1670@1|root,COG1670@2|Bacteria,4NQ8K@976|Bacteroidetes,2FMII@200643|Bacteroidia,3XJVU@558415|Marinilabiliaceae	976|Bacteroidetes	J	Acetyltransferase (GNAT) domain	speG	-	2.3.1.57	ko:K00657	ko00330,ko01100,ko04216,map00330,map01100,map04216	M00135	R01154	RC00004,RC00096	ko00000,ko00001,ko00002,ko01000	-	-	-	Acetyltransf_3
BYD3_k127_4612973_11	1453498.LG45_12190	0.0001876	54.0	COG0860@1|root,COG0860@2|Bacteria,4NGKC@976|Bacteroidetes,1HX7G@117743|Flavobacteriia,2NTX6@237|Flavobacterium	976|Bacteroidetes	M	Ami_3	amiA	-	3.5.1.28	ko:K01448	ko01503,map01503	M00727	R04112	RC00064,RC00141	ko00000,ko00001,ko00002,ko01000,ko01011,ko03036	-	-	-	Amidase_3
BYD3_k127_4612973_7	1227739.Hsw_2774	2.084e-44	171.0	COG1596@1|root,COG1596@2|Bacteria,4NFXJ@976|Bacteroidetes,47Q2A@768503|Cytophagia	976|Bacteroidetes	M	Polysaccharide biosynthesis/export protein	-	-	-	ko:K01991	ko02026,map02026	-	-	-	ko00000,ko00001,ko02000	1.B.18	-	-	Poly_export,SLBB
BYD3_k127_4612973_8	1121012.AUKX01000058_gene1367	1.273e-11	70.0	COG0489@1|root,COG3206@1|root,COG0489@2|Bacteria,COG3206@2|Bacteria,4NEXU@976|Bacteroidetes,1HXKJ@117743|Flavobacteriia,23HT3@178469|Arenibacter	976|Bacteroidetes	DM	G-rich domain on putative tyrosine kinase	-	-	-	-	-	-	-	-	-	-	-	-	AAA_31,CbiA,GNVR,Wzz
BYD3_k127_4632394_4	530564.Psta_3462	5.8e-51	182.0	COG0667@1|root,COG0667@2|Bacteria,2IYAG@203682|Planctomycetes	203682|Planctomycetes	C	Aldo/keto reductase family	-	-	-	-	-	-	-	-	-	-	-	-	Aldo_ket_red
BYD3_k127_4632394_5	313596.RB2501_04695	1.189e-36	143.0	COG2010@1|root,COG2010@2|Bacteria,4NSE3@976|Bacteroidetes,1I1DC@117743|Flavobacteriia	976|Bacteroidetes	C	Haem-binding domain	-	-	-	-	-	-	-	-	-	-	-	-	Haem_bd
BYD3_k127_4632394_2	886293.Sinac_7308	5.574e-125	409.0	COG1082@1|root,COG1082@2|Bacteria,2J0SX@203682|Planctomycetes	203682|Planctomycetes	G	Xylose isomerase-like TIM barrel	-	-	-	-	-	-	-	-	-	-	-	-	AP_endonuc_2
BYD3_k127_4632394_0	1453500.AT05_03395	6.135e-245	764.0	COG0606@1|root,COG0606@2|Bacteria,4NE0G@976|Bacteroidetes,1HXWB@117743|Flavobacteriia	976|Bacteroidetes	O	magnesium chelatase	comM	-	-	ko:K07391	-	-	-	-	ko00000	-	-	-	ChlI,Mg_chelatase,Mg_chelatase_C
BYD3_k127_4632394_1	929556.Solca_0456	1.301e-143	465.0	COG1680@1|root,COG1680@2|Bacteria,4NEVS@976|Bacteroidetes,1J045@117747|Sphingobacteriia	976|Bacteroidetes	V	COGs COG1680 Beta-lactamase class C and other penicillin binding protein	-	-	-	-	-	-	-	-	-	-	-	-	Beta-lactamase
BYD3_k127_4632394_3	869213.JCM21142_31099	3.444e-60	227.0	COG2067@1|root,COG2067@2|Bacteria	2|Bacteria	I	long-chain fatty acid transporting porin activity	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_4633645_1	1047013.AQSP01000134_gene1347	1.167e-66	239.0	COG0577@1|root,COG0577@2|Bacteria	2|Bacteria	V	efflux transmembrane transporter activity	-	-	-	ko:K02004	-	M00258	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	FtsX,MacB_PCD
BYD3_k127_4633645_0	1408473.JHXO01000001_gene2131	1.837e-156	499.0	COG0667@1|root,COG0667@2|Bacteria,4NFCN@976|Bacteroidetes,2FMAG@200643|Bacteroidia	976|Bacteroidetes	C	aldo keto reductase family	gpr	-	-	ko:K19265	-	-	-	-	ko00000,ko01000	-	-	-	Aldo_ket_red
BYD3_k127_4633645_2	1124780.ANNU01000049_gene2206	2.838e-38	146.0	2CEYK@1|root,31W5M@2|Bacteria,4NQEQ@976|Bacteroidetes,47R7M@768503|Cytophagia	976|Bacteroidetes	S	Domain of unknown function (DUF1987)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1987
BYD3_k127_4633645_3	1032480.MLP_36400	1.962e-05	50.0	COG0105@1|root,COG0105@2|Bacteria,2H7CM@201174|Actinobacteria	201174|Actinobacteria	F	UTP biosynthetic process	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_4635168_7	1408473.JHXO01000002_gene3884	9.005e-17	81.0	COG1143@1|root,COG1143@2|Bacteria,4NI9I@976|Bacteroidetes,2FQYT@200643|Bacteroidia	976|Bacteroidetes	C	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient	nuoI	-	1.6.5.3	ko:K00338	ko00190,ko01100,map00190,map01100	M00144	R11945	RC00061	ko00000,ko00001,ko00002,ko01000	3.D.1	-	-	Fer4,Fer4_7
BYD3_k127_4635168_3	742817.HMPREF9449_01342	1.794e-159	509.0	COG1005@1|root,COG1005@2|Bacteria,4NGK7@976|Bacteroidetes,2FNVC@200643|Bacteroidia,22VY1@171551|Porphyromonadaceae	976|Bacteroidetes	C	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone	nuoH	-	1.6.5.3	ko:K00337	ko00190,ko01100,map00190,map01100	M00144	R11945	RC00061	ko00000,ko00001,ko00002,ko01000	3.D.1	-	-	NADHdh
BYD3_k127_4635168_2	313603.FB2170_07949	1.44e-161	516.0	COG0649@1|root,COG0649@2|Bacteria,4NF02@976|Bacteroidetes,1HZMG@117743|Flavobacteriia	976|Bacteroidetes	C	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient	nuoD	-	1.6.5.3	ko:K00333,ko:K13378	ko00190,ko01100,map00190,map01100	M00144	R11945	RC00061	ko00000,ko00001,ko00002,ko01000	3.D.1	-	-	Complex1_30kDa,Complex1_49kDa,NiFeSe_Hases
BYD3_k127_4635168_5	1121875.KB907547_gene3142	2.132e-37	149.0	COG0852@1|root,COG0852@2|Bacteria,4NPZH@976|Bacteroidetes,1I1PJ@117743|Flavobacteriia	976|Bacteroidetes	C	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient	nuoC	-	1.6.5.3	ko:K00332	ko00190,ko01100,map00190,map01100	M00144	R11945	RC00061	ko00000,ko00001,ko00002,ko01000	3.D.1	-	-	Complex1_30kDa
BYD3_k127_4635168_4	1121129.KB903359_gene1193	2.9e-85	286.0	COG0377@1|root,COG0377@2|Bacteria,4NFKT@976|Bacteroidetes,2FMK8@200643|Bacteroidia,22WBX@171551|Porphyromonadaceae	976|Bacteroidetes	C	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient	nuoB	-	1.6.5.3	ko:K00331	ko00190,ko01100,map00190,map01100	M00144	R11945	RC00061	ko00000,ko00001,ko00002,ko01000	3.D.1	-	-	Oxidored_q6
BYD3_k127_4635168_6	1279009.ADICEAN_01552	1.934e-30	124.0	COG0838@1|root,COG0838@2|Bacteria,4NQET@976|Bacteroidetes	976|Bacteroidetes	C	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient	nuoA	GO:0003674,GO:0003824,GO:0003954,GO:0005575,GO:0008137,GO:0008150,GO:0008152,GO:0016020,GO:0016491,GO:0016651,GO:0016655,GO:0030964,GO:0032991,GO:0044425,GO:0050136,GO:0055114,GO:0098796,GO:1902494	1.6.5.3	ko:K00330	ko00190,ko01100,map00190,map01100	M00144	R11945	RC00061	ko00000,ko00001,ko00002,ko01000	3.D.1	-	-	Oxidored_q4
BYD3_k127_4635168_1	153721.MYP_1592	1.155e-167	536.0	COG1252@1|root,COG1252@2|Bacteria,4NE0H@976|Bacteroidetes,47K1Q@768503|Cytophagia	976|Bacteroidetes	C	PFAM FAD-dependent pyridine nucleotide-disulphide oxidoreductase	ndh	-	1.6.99.3	ko:K03885	ko00190,map00190	-	-	-	ko00000,ko00001,ko01000	-	-	-	Pyr_redox_2
BYD3_k127_4635168_0	742767.HMPREF9456_02437	0.0	1133.0	COG3808@1|root,COG3808@2|Bacteria,4NF2I@976|Bacteroidetes,2FM7F@200643|Bacteroidia,22WAD@171551|Porphyromonadaceae	976|Bacteroidetes	C	Sodium pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for Na( ) movement across the membrane	hppA	-	3.6.1.1	ko:K15987	ko00190,map00190	-	-	-	ko00000,ko00001,ko01000	3.A.10.1	-	-	H_PPase,OmpA
BYD3_k127_4648196_0	1121904.ARBP01000002_gene6791	1.635e-276	874.0	COG4888@1|root,COG4888@2|Bacteria,4NEE8@976|Bacteroidetes	976|Bacteroidetes	S	PFAM ASPIC and UnbV	-	-	-	-	-	-	-	-	-	-	-	-	UnbV_ASPIC,VCBS
BYD3_k127_4752907_9	1408473.JHXO01000006_gene1275	8.283e-35	134.0	COG0480@1|root,COG0480@2|Bacteria,4NG4H@976|Bacteroidetes,2FN1G@200643|Bacteroidia	976|Bacteroidetes	J	elongation factor G	fusA2	-	-	ko:K02355	-	-	-	-	ko00000,ko03012,ko03029	-	-	-	EFG_C,EFG_II,EFG_IV,GTP_EFTU,GTP_EFTU_D2
BYD3_k127_4752907_0	385682.AFSL01000053_gene469	0.0	1315.0	COG0209@1|root,COG0209@2|Bacteria,4NEHQ@976|Bacteroidetes,2FN30@200643|Bacteroidia,3XJVM@558415|Marinilabiliaceae	976|Bacteroidetes	F	Ribonucleotide reductase, barrel domain	nrd	-	1.17.4.1	ko:K00525	ko00230,ko00240,ko01100,map00230,map00240,map01100	M00053	R02017,R02018,R02019,R02024	RC00613	ko00000,ko00001,ko00002,ko01000,ko03400	-	-	-	Ribonuc_red_lgC,Ribonuc_red_lgN
BYD3_k127_4752907_12	345341.KUTG_07816	7.682e-26	121.0	COG2273@1|root,COG2273@2|Bacteria,2GKFN@201174|Actinobacteria	201174|Actinobacteria	G	alpha beta	-	-	-	-	-	-	-	-	-	-	-	-	F5_F8_type_C,Glyco_hydro_16
BYD3_k127_4752907_13	1223410.KN050846_gene1610	3.478e-19	89.0	COG2827@1|root,COG2827@2|Bacteria,4NUN3@976|Bacteroidetes,1I51S@117743|Flavobacteriia	976|Bacteroidetes	L	endonuclease containing a URI domain	-	-	-	ko:K07461	-	-	-	-	ko00000	-	-	-	GIY-YIG
BYD3_k127_4752907_17	649349.Lbys_1338	4.673e-06	49.0	COG1961@1|root,COG1961@2|Bacteria,4NFJA@976|Bacteroidetes,47RIT@768503|Cytophagia	976|Bacteroidetes	L	Site-specific recombinase, DNA invertase Pin	-	-	-	-	-	-	-	-	-	-	-	-	Recombinase,Resolvase,Zn_ribbon_recom
BYD3_k127_4752907_16	1235790.C805_00259	1.669e-10	73.0	COG5492@1|root,COG5492@2|Bacteria,1VBT6@1239|Firmicutes,25B2B@186801|Clostridia,25ZQX@186806|Eubacteriaceae	186801|Clostridia	N	Bacterial Ig-like domain 2	-	-	-	-	-	-	-	-	-	-	-	-	Big_2,Flg_new
BYD3_k127_4752907_3	1168034.FH5T_10330	8.062e-122	396.0	COG0320@1|root,COG0320@2|Bacteria,4NEB5@976|Bacteroidetes,2FNBV@200643|Bacteroidia	976|Bacteroidetes	H	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives	lipA	-	2.8.1.8	ko:K03644	ko00785,ko01100,map00785,map01100	-	R07767,R07768	RC01978	ko00000,ko00001,ko01000	-	-	-	LIAS_N,Radical_SAM
BYD3_k127_4752907_15	1408473.JHXO01000006_gene1387	7.758e-15	76.0	COG3063@1|root,COG3063@2|Bacteria,4PKEN@976|Bacteroidetes,2G3EJ@200643|Bacteroidia	976|Bacteroidetes	NU	Type IV pilus biogenesis stability protein PilW	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_4752907_5	1340434.AXVA01000003_gene2313	3.2e-71	244.0	COG2818@1|root,COG2818@2|Bacteria,1UYWG@1239|Firmicutes,4HGWW@91061|Bacilli,1ZG1A@1386|Bacillus	91061|Bacilli	L	Methyladenine glycosylase	tag	-	3.2.2.20	ko:K01246	ko03410,map03410	-	-	-	ko00000,ko00001,ko01000,ko03400	-	-	-	Adenine_glyco
BYD3_k127_4752907_8	1121097.JCM15093_250	8.354e-47	170.0	COG0393@1|root,COG0393@2|Bacteria,4NQGB@976|Bacteroidetes,2FT9V@200643|Bacteroidia,4ARBR@815|Bacteroidaceae	976|Bacteroidetes	S	Belongs to the UPF0145 family	-	-	-	-	-	-	-	-	-	-	-	-	YbjQ_1
BYD3_k127_4752907_7	411901.BACCAC_00815	2.161e-57	207.0	COG0664@1|root,COG0664@2|Bacteria,4NPF0@976|Bacteroidetes,2G2ZV@200643|Bacteroidia,4AW7D@815|Bacteroidaceae	976|Bacteroidetes	K	Crp-like helix-turn-helix domain	-	-	-	-	-	-	-	-	-	-	-	-	HTH_Crp_2,cNMP_binding
BYD3_k127_4752907_4	869213.JCM21142_104361	1.237e-119	390.0	COG1145@1|root,COG1145@2|Bacteria,4NI4X@976|Bacteroidetes	976|Bacteroidetes	C	4Fe-4S binding domain	-	-	-	-	-	-	-	-	-	-	-	-	Fer4,Fer4_6
BYD3_k127_4752907_1	742767.HMPREF9456_02073	3.967e-250	782.0	COG0369@1|root,COG1151@2|Bacteria,4NGRB@976|Bacteroidetes,2FMDK@200643|Bacteroidia,22W6M@171551|Porphyromonadaceae	976|Bacteroidetes	C	Catalyzes the reduction of hydroxylamine to form NH(3) and H(2)O	hcp	GO:0000302,GO:0003674,GO:0003824,GO:0004601,GO:0006807,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0009636,GO:0009987,GO:0010035,GO:0016209,GO:0016491,GO:0016661,GO:0016684,GO:0042221,GO:0042493,GO:0042542,GO:0046677,GO:0050418,GO:0050896,GO:0051716,GO:0055114,GO:0070887,GO:0097237,GO:0098754,GO:0098869,GO:1901700,GO:1990748	1.7.99.1	ko:K05601	ko00910,map00910	-	R00143	RC02797	ko00000,ko00001,ko01000	-	-	-	Prismane
BYD3_k127_4752907_10	385682.AFSL01000009_gene2495	1.436e-31	126.0	COG1917@1|root,COG1917@2|Bacteria,4NSB6@976|Bacteroidetes,2FT3R@200643|Bacteroidia	976|Bacteroidetes	S	Cupin domain protein	-	-	-	-	-	-	-	-	-	-	-	-	Cupin_2
BYD3_k127_4752907_11	700598.Niako_5063	4.721e-27	120.0	COG3595@1|root,COG3595@2|Bacteria,4NSAQ@976|Bacteroidetes,1ITBV@117747|Sphingobacteriia	976|Bacteroidetes	S	Putative auto-transporter adhesin, head GIN domain	-	-	-	-	-	-	-	-	-	-	-	-	DUF2807
BYD3_k127_4752907_6	693979.Bache_1446	2.913e-65	225.0	COG2131@1|root,COG2131@2|Bacteria,4NM48@976|Bacteroidetes,2FRZ1@200643|Bacteroidia,4AQJS@815|Bacteroidaceae	976|Bacteroidetes	F	Cytidine and deoxycytidylate deaminase zinc-binding region	comEB	-	3.5.4.12	ko:K01493	ko00240,ko01100,map00240,map01100	M00429	R01663	RC00074	ko00000,ko00001,ko00002,ko01000,ko02044	-	-	-	dCMP_cyt_deam_1
BYD3_k127_4752907_2	927658.AJUM01000037_gene1915	8.736e-147	477.0	COG0793@1|root,COG0793@2|Bacteria,4NEGV@976|Bacteroidetes,2FP0Y@200643|Bacteroidia,3XJM9@558415|Marinilabiliaceae	976|Bacteroidetes	M	tail specific protease	ctp	-	3.4.21.102	ko:K03797	-	-	-	-	ko00000,ko01000,ko01002	-	-	-	PDZ_2,Peptidase_S41
BYD3_k127_4815600_6	314345.SPV1_09558	2.521e-134	438.0	COG1894@1|root,COG1894@2|Bacteria,1MV8F@1224|Proteobacteria	1224|Proteobacteria	C	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain	hoxF	GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464	1.12.1.2	ko:K18005	-	-	-	-	ko00000,ko01000	-	-	-	2Fe-2S_thioredx,Complex1_51K,NADH_4Fe-4S,SLBB
BYD3_k127_4815600_19	522306.CAP2UW1_1000	3.609e-73	253.0	COG3383@1|root,COG3383@2|Bacteria,1MXTC@1224|Proteobacteria,2WGYK@28216|Betaproteobacteria	28216|Betaproteobacteria	C	4Fe-4S single cluster domain	hoxU	GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464	1.12.1.2	ko:K18006	-	-	-	-	ko00000,ko01000	-	-	-	Fer2_4,Fer4_15,NADH-G_4Fe-4S_3
BYD3_k127_4815600_16	697282.Mettu_1512	1.02e-76	261.0	COG1941@1|root,COG1941@2|Bacteria,1NS0E@1224|Proteobacteria,1RW0G@1236|Gammaproteobacteria,1XDM0@135618|Methylococcales	135618|Methylococcales	C	PFAM NADH ubiquinone	-	-	1.12.1.2	ko:K18007	-	-	-	-	ko00000,ko01000	-	-	-	Oxidored_q6
BYD3_k127_4815600_3	497321.C664_02175	3.936e-199	631.0	COG3259@1|root,COG3259@2|Bacteria,1QUQ7@1224|Proteobacteria,2VJT0@28216|Betaproteobacteria,2KVAX@206389|Rhodocyclales	206389|Rhodocyclales	C	Belongs to the NiFe NiFeSe hydrogenase large subunit family	hoxH	-	1.12.1.2	ko:K00436	-	-	R00700	-	ko00000,ko01000	-	-	-	NiFeSe_Hases
BYD3_k127_4815600_32	876269.ARWA01000001_gene1529	5.699e-28	118.0	COG0680@1|root,COG0680@2|Bacteria,1MZE1@1224|Proteobacteria,2UJ8E@28211|Alphaproteobacteria,3NCCE@45404|Beijerinckiaceae	28211|Alphaproteobacteria	C	hydrogenase maturation protease	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_4815600_12	177439.DP0769	7.387e-91	309.0	COG0167@1|root,COG0167@2|Bacteria,1MXER@1224|Proteobacteria,42QNP@68525|delta/epsilon subdivisions,2WMX5@28221|Deltaproteobacteria,2MMTR@213118|Desulfobacterales	28221|Deltaproteobacteria	F	Catalyzes the conversion of dihydroorotate to orotate	-	-	1.3.98.1	ko:K00226	ko00240,ko01100,map00240,map01100	M00051	R01867	RC00051	ko00000,ko00001,ko00002,ko01000	-	-	-	DHO_dh
BYD3_k127_4815600_25	886379.AEWI01000049_gene3206	9.793e-47	179.0	29N3N@1|root,32D2M@2|Bacteria,4NRTM@976|Bacteroidetes,2G223@200643|Bacteroidia,3XJ24@558415|Marinilabiliaceae	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_4815600_14	927658.AJUM01000042_gene1759	6.536e-87	290.0	COG1014@1|root,COG1014@2|Bacteria,4NGWJ@976|Bacteroidetes,2FNG6@200643|Bacteroidia,3XJRX@558415|Marinilabiliaceae	976|Bacteroidetes	C	Pyruvate ferredoxin/flavodoxin oxidoreductase	porG	-	1.2.7.3	ko:K00177	ko00020,ko00720,ko01100,ko01120,ko01200,map00020,map00720,map01100,map01120,map01200	M00009,M00011,M00173,M00620	R01197	RC00004,RC02833	br01601,ko00000,ko00001,ko00002,ko01000	-	-	-	POR
BYD3_k127_4815600_8	927658.AJUM01000042_gene1758	2.29e-116	379.0	COG1013@1|root,COG1013@2|Bacteria,4NDWF@976|Bacteroidetes,2FP3C@200643|Bacteroidia,3XJ0W@558415|Marinilabiliaceae	976|Bacteroidetes	C	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain	vorA	-	1.2.7.11,1.2.7.3	ko:K00175	ko00010,ko00020,ko00620,ko00650,ko00720,ko01100,ko01120,ko01130,ko01200,map00010,map00020,map00620,map00650,map00720,map01100,map01120,map01130,map01200	M00009,M00011,M00173,M00620	R01196,R01197	RC00004,RC02742,RC02833	br01601,ko00000,ko00001,ko00002,ko01000	-	-	-	TPP_enzyme_C
BYD3_k127_4815600_5	709991.Odosp_3201	9.661e-161	512.0	COG0674@1|root,COG0674@2|Bacteria,4NGYK@976|Bacteroidetes,2FM6R@200643|Bacteroidia,22WCE@171551|Porphyromonadaceae	976|Bacteroidetes	C	Catalyzes the coenzyme A-dependent oxidation of 3-methyl-2-oxobutanoate coupled to the reduction of ferredoxin producing S-(2-methylpropanoyl)-CoA	vorB	-	1.2.7.11,1.2.7.3	ko:K00174	ko00010,ko00020,ko00620,ko00650,ko00720,ko01100,ko01120,ko01130,ko01200,map00010,map00020,map00620,map00650,map00720,map01100,map01120,map01130,map01200	M00009,M00011,M00173,M00620	R01196,R01197	RC00004,RC02742,RC02833	br01601,ko00000,ko00001,ko00002,ko01000	-	-	-	PFOR_II,POR_N
BYD3_k127_4815600_31	1501391.LG35_06240	4.274e-31	123.0	COG1146@1|root,COG1146@2|Bacteria,4NV91@976|Bacteroidetes,2FTXT@200643|Bacteroidia,22VMY@171550|Rikenellaceae	976|Bacteroidetes	C	4Fe-4S binding domain	oorD	-	1.2.7.3	ko:K00176	ko00020,ko00720,ko01100,ko01120,ko01200,map00020,map00720,map01100,map01120,map01200	M00009,M00011,M00173,M00620	R01197	RC00004,RC02833	br01601,ko00000,ko00001,ko00002,ko01000	-	-	-	Fer4,Fer4_21,Fer4_4
BYD3_k127_4815600_4	945713.IALB_1428	7.666e-169	540.0	COG0436@1|root,COG0436@2|Bacteria	2|Bacteria	E	Aminotransferase	alaC	-	-	-	-	-	-	-	-	-	-	-	Aminotran_1_2
BYD3_k127_4815600_1	927658.AJUM01000042_gene1754	1.248e-223	699.0	COG1541@1|root,COG1541@2|Bacteria,4NGRR@976|Bacteroidetes,2FNC4@200643|Bacteroidia,3XJ09@558415|Marinilabiliaceae	976|Bacteroidetes	H	AMP-binding enzyme C-terminal domain	-	-	6.2.1.30	ko:K01912	ko00360,ko01120,ko05111,map00360,map01120,map05111	-	R02539	RC00004,RC00014	ko00000,ko00001,ko01000	-	-	-	AMP-binding,AMP-binding_C_2
BYD3_k127_4815600_23	927658.AJUM01000042_gene1753	1.473e-48	177.0	COG4747@1|root,COG4747@2|Bacteria,4NQIW@976|Bacteroidetes,2FS2U@200643|Bacteroidia,3XK6D@558415|Marinilabiliaceae	976|Bacteroidetes	S	ACT domain protein	-	-	-	-	-	-	-	-	-	-	-	-	ACT
BYD3_k127_4815600_0	1168289.AJKI01000006_gene241	5.815e-287	896.0	COG1042@1|root,COG1042@2|Bacteria,4NFTI@976|Bacteroidetes,2FNSJ@200643|Bacteroidia,3XJFP@558415|Marinilabiliaceae	976|Bacteroidetes	C	ATP-grasp domain	-	-	-	ko:K09181	-	-	-	-	ko00000	-	-	-	ATP-grasp_5,CoA_binding_2,Succ_CoA_lig
BYD3_k127_4815600_24	1173024.KI912153_gene229	1.442e-47	177.0	COG5483@1|root,COG5483@2|Bacteria,1G5J1@1117|Cyanobacteria,1JMHK@1189|Stigonemataceae	1117|Cyanobacteria	S	Protein of unknown function, DUF488	-	-	-	-	-	-	-	-	-	-	-	-	DUF488
BYD3_k127_4815600_20	1168289.AJKI01000011_gene526	1.369e-60	214.0	COG1225@1|root,COG1225@2|Bacteria,4PMJJ@976|Bacteroidetes,2G0DM@200643|Bacteroidia,3XKQZ@558415|Marinilabiliaceae	976|Bacteroidetes	O	Glutathione peroxidase	-	-	-	-	-	-	-	-	-	-	-	-	AhpC-TSA
BYD3_k127_4815600_13	153721.MYP_1159	2.447e-87	293.0	COG0702@1|root,COG0702@2|Bacteria,4NGMR@976|Bacteroidetes,47NYS@768503|Cytophagia	976|Bacteroidetes	GM	epimerase	-	-	-	-	-	-	-	-	-	-	-	-	Epimerase,Semialdhyde_dh
BYD3_k127_4815600_17	616991.JPOO01000003_gene235	1.194e-76	267.0	COG1409@1|root,COG1409@2|Bacteria,4NF9K@976|Bacteroidetes,1HY33@117743|Flavobacteriia,23HTN@178469|Arenibacter	976|Bacteroidetes	S	Calcineurin-like phosphoesterase	-	-	-	-	-	-	-	-	-	-	-	-	Metallophos,MetallophosC,MetallophosN
BYD3_k127_4815600_29	929713.NIASO_19170	6.608e-38	144.0	COG2315@1|root,COG2315@2|Bacteria,4PMMJ@976|Bacteroidetes,1J0VY@117747|Sphingobacteriia	976|Bacteroidetes	S	YjbR	-	-	-	-	-	-	-	-	-	-	-	-	YjbR
BYD3_k127_4815600_22	1267211.KI669560_gene2356	1.399e-49	183.0	COG5398@1|root,COG5398@2|Bacteria	2|Bacteria	P	heme oxygenase	hmuO	GO:0003674,GO:0003824,GO:0004392,GO:0005488,GO:0005575,GO:0006725,GO:0006778,GO:0006787,GO:0006788,GO:0006807,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0009056,GO:0009987,GO:0016020,GO:0016491,GO:0016705,GO:0019439,GO:0020037,GO:0033013,GO:0033015,GO:0034641,GO:0042167,GO:0042168,GO:0042440,GO:0042592,GO:0044237,GO:0044248,GO:0044270,GO:0046149,GO:0046483,GO:0046700,GO:0046906,GO:0048037,GO:0048878,GO:0050801,GO:0050896,GO:0051186,GO:0051187,GO:0055065,GO:0055072,GO:0055076,GO:0055080,GO:0055114,GO:0065007,GO:0065008,GO:0071704,GO:0097159,GO:0098771,GO:1901360,GO:1901361,GO:1901363,GO:1901564,GO:1901565,GO:1901575	1.14.15.20	ko:K21480	ko00860,ko01100,ko01110,map00860,map01100,map01110	-	R11579	RC01270	ko00000,ko00001,ko01000	-	-	-	Heme_oxygenase
BYD3_k127_4815600_18	1235803.C825_05026	3.355e-73	249.0	COG2193@1|root,COG2193@2|Bacteria,4NPMH@976|Bacteroidetes,2FT1G@200643|Bacteroidia,22Y1Z@171551|Porphyromonadaceae	976|Bacteroidetes	P	Iron-storage protein, whose ferroxidase center binds Fe(2 ) ions, oxidizes them by dioxygen to Fe(3 ), and participates in the subsequent Fe(3 ) oxide mineral core formation within the central cavity of the protein complex	-	-	1.16.3.1	ko:K03594	ko00860,map00860	-	R00078	RC02758	ko00000,ko00001,ko01000	-	-	-	Ferritin
BYD3_k127_4815600_26	616991.JPOO01000003_gene1501	3.053e-42	160.0	2E7UU@1|root,3329R@2|Bacteria,4NV2T@976|Bacteroidetes,1IBFJ@117743|Flavobacteriia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_4815600_11	431943.CKL_2552	6.663e-95	319.0	COG0491@1|root,COG0491@2|Bacteria,1V2XF@1239|Firmicutes,24JW4@186801|Clostridia	186801|Clostridia	S	Metallo-beta-lactamase superfamily	-	-	-	-	-	-	-	-	-	-	-	-	Lactamase_B
BYD3_k127_4815600_9	869213.JCM21142_103	1.011e-109	364.0	COG3239@1|root,COG3239@2|Bacteria,4NNB2@976|Bacteroidetes	976|Bacteroidetes	I	fatty acid desaturase	-	-	1.14.19.23,1.14.19.45	ko:K10255	ko02020,map02020	-	-	-	ko00000,ko00001,ko01000,ko01004	-	-	-	FA_desaturase
BYD3_k127_4815600_2	1408473.JHXO01000008_gene2644	7.927e-222	697.0	COG1032@1|root,COG1032@2|Bacteria,4NFPW@976|Bacteroidetes,2FWM3@200643|Bacteroidia	976|Bacteroidetes	C	Domain of unknown function (DUF4070)	-	-	-	-	-	-	-	-	-	-	-	-	B12-binding,DUF4070,Radical_SAM
BYD3_k127_4815600_21	1168289.AJKI01000046_gene898	9.546e-58	211.0	COG3279@1|root,COG3279@2|Bacteria,4NJ3A@976|Bacteroidetes,2G2UX@200643|Bacteroidia	976|Bacteroidetes	KT	LytTr DNA-binding domain	-	-	-	-	-	-	-	-	-	-	-	-	LytTR
BYD3_k127_4815600_36	1237149.C900_03730	1.479e-05	50.0	COG0513@1|root,COG0513@2|Bacteria,4NEVI@976|Bacteroidetes,47U5F@768503|Cytophagia	976|Bacteroidetes	L	helicase superfamily c-terminal domain	-	-	3.6.4.13	ko:K11927	ko03018,map03018	-	-	-	ko00000,ko00001,ko01000,ko03019	-	-	-	DEAD,Helicase_C
BYD3_k127_4815600_10	1168034.FH5T_22090	6.816e-103	342.0	COG0513@1|root,COG0513@2|Bacteria,4NEVI@976|Bacteroidetes,2FM7Y@200643|Bacteroidia	976|Bacteroidetes	L	Belongs to the DEAD box helicase family	-	-	3.6.4.13	ko:K11927	ko03018,map03018	-	-	-	ko00000,ko00001,ko01000,ko03019	-	-	-	DEAD,Helicase_C
BYD3_k127_4815600_35	1237149.C900_03729	4.904e-06	51.0	COG1278@1|root,COG1278@2|Bacteria,4PNWR@976|Bacteroidetes	976|Bacteroidetes	K	Cold shock	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_4815600_33	1168034.FH5T_15355	9.97e-26	107.0	COG1278@1|root,COG1278@2|Bacteria,4PK59@976|Bacteroidetes,2FZ3P@200643|Bacteroidia	976|Bacteroidetes	K	'Cold-shock' DNA-binding domain	-	-	-	ko:K03704	-	-	-	-	ko00000,ko03000	-	-	-	CSD
BYD3_k127_4815600_15	536227.CcarbDRAFT_4284	7.851e-86	288.0	COG0247@1|root,COG0247@2|Bacteria,1TPAM@1239|Firmicutes,24I1E@186801|Clostridia,36WH8@31979|Clostridiaceae	186801|Clostridia	C	lactate metabolic process	-	-	-	-	-	-	-	-	-	-	-	-	CCG
BYD3_k127_4815600_34	929703.KE386491_gene3631	2.22e-18	98.0	COG4935@1|root,COG4935@2|Bacteria,4NH8G@976|Bacteroidetes,47MKM@768503|Cytophagia	976|Bacteroidetes	O	PFAM Spore coat protein CotH	cotH	-	-	-	-	-	-	-	-	-	-	-	CHB_HEX_C_1,CotH,LTD,P_proprotein
BYD3_k127_4815600_28	1220534.B655_2327	4.319e-40	153.0	COG3797@1|root,arCOG08236@2157|Archaea	2157|Archaea	S	Protein of unknown function (DUF1697)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1697
BYD3_k127_4815600_7	1449335.JQLG01000004_gene1810	4.486e-133	429.0	COG1028@1|root,COG1028@2|Bacteria	1449335.JQLG01000004_gene1810|-	IQ	oxidoreductase activity, acting on CH-OH group of donors	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_4895339_0	1408473.JHXO01000010_gene3500	0.0	1135.0	COG0249@1|root,COG0249@2|Bacteria,4NEGB@976|Bacteroidetes,2FMFA@200643|Bacteroidia	976|Bacteroidetes	L	that it carries out the mismatch recognition step. This protein has a weak ATPase activity	mutS	GO:0003674,GO:0003676,GO:0003677,GO:0003684,GO:0003690,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008094,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0030983,GO:0032300,GO:0032991,GO:0033554,GO:0034641,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1990391	-	ko:K03555	ko03430,map03430	-	-	-	ko00000,ko00001,ko03400	-	-	-	MutS_I,MutS_II,MutS_III,MutS_IV,MutS_V
BYD3_k127_4895339_8	1191523.MROS_1190	8.841e-82	279.0	COG0101@1|root,COG0101@2|Bacteria	2|Bacteria	J	tRNA pseudouridine synthase activity	truA	GO:0001522,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016853,GO:0016866,GO:0031119,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:1901360	5.4.99.12	ko:K06173	-	-	-	-	ko00000,ko01000,ko03016	-	-	-	PseudoU_synth_1
BYD3_k127_4895339_3	420324.KI911943_gene5267	2.299e-168	548.0	COG3387@1|root,COG3387@2|Bacteria,1MV08@1224|Proteobacteria,2TRMQ@28211|Alphaproteobacteria,1JRNZ@119045|Methylobacteriaceae	28211|Alphaproteobacteria	G	PFAM glycoside hydrolase 15-related	-	-	-	-	-	-	-	-	-	-	-	-	Glyco_hydro_15
BYD3_k127_4895339_14	443143.GM18_3150	1.06e-46	172.0	2AZF8@1|root,31RP4@2|Bacteria,1RIZG@1224|Proteobacteria,42ZVQ@68525|delta/epsilon subdivisions,2WV5D@28221|Deltaproteobacteria	28221|Deltaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_4895339_5	925409.KI911562_gene2551	1.116e-129	420.0	COG0451@1|root,COG0451@2|Bacteria,4NG8Y@976|Bacteroidetes,1IQHM@117747|Sphingobacteriia	976|Bacteroidetes	GM	NAD(P)H-binding	-	-	-	-	-	-	-	-	-	-	-	-	Epimerase,NAD_binding_10
BYD3_k127_4895339_15	1211813.CAPH01000013_gene472	1.424e-40	155.0	COG1238@1|root,COG1238@2|Bacteria,4NQAX@976|Bacteroidetes,2FRY9@200643|Bacteroidia	976|Bacteroidetes	S	SNARE-like domain protein	yqaA	-	-	-	-	-	-	-	-	-	-	-	SNARE_assoc
BYD3_k127_4895339_12	1168034.FH5T_10765	1.022e-50	189.0	COG3861@1|root,COG3861@2|Bacteria,4NPP5@976|Bacteroidetes	976|Bacteroidetes	S	electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity	-	-	-	-	-	-	-	-	-	-	-	-	PRC
BYD3_k127_4895339_9	1168289.AJKI01000018_gene2011	1.365e-78	274.0	COG4850@1|root,COG4850@2|Bacteria,4NFZ6@976|Bacteroidetes,2FWSU@200643|Bacteroidia,3XINT@558415|Marinilabiliaceae	976|Bacteroidetes	S	Uncharacterized conserved protein (DUF2183)	-	-	-	-	-	-	-	-	-	-	-	-	DUF2183
BYD3_k127_4895339_10	1168289.AJKI01000018_gene2010	3.633e-65	233.0	COG1597@1|root,COG1597@2|Bacteria,4NJ68@976|Bacteroidetes,2FXIK@200643|Bacteroidia,3XIX5@558415|Marinilabiliaceae	976|Bacteroidetes	I	Diacylglycerol kinase catalytic domain (presumed)	-	-	-	-	-	-	-	-	-	-	-	-	DAGK_acc,DAGK_cat
BYD3_k127_4895339_13	1142394.PSMK_06420	2.095e-47	174.0	COG4329@1|root,COG4329@2|Bacteria,2J3D8@203682|Planctomycetes	203682|Planctomycetes	S	Predicted membrane protein (DUF2243)	-	-	-	-	-	-	-	-	-	-	-	-	DUF2243
BYD3_k127_4895339_11	880074.BARVI_01800	2.043e-53	196.0	COG4123@1|root,COG4123@2|Bacteria,4NG1X@976|Bacteroidetes,2FMHH@200643|Bacteroidia,22Y0T@171551|Porphyromonadaceae	976|Bacteroidetes	J	Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC)	smtA	GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008175,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016426,GO:0016430,GO:0016740,GO:0016741,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360	2.1.1.223	ko:K15460	-	-	-	-	ko00000,ko01000,ko03016	-	-	-	MTS
BYD3_k127_4895339_4	1124780.ANNU01000044_gene487	6.992e-133	433.0	COG1063@1|root,COG1063@2|Bacteria,4P3W3@976|Bacteroidetes	976|Bacteroidetes	E	Glucose dehydrogenase C-terminus	-	-	-	-	-	-	-	-	-	-	-	-	ADH_N,Glu_dehyd_C
BYD3_k127_4895339_2	926549.KI421517_gene1098	8.166e-274	853.0	COG3387@1|root,COG3387@2|Bacteria,4NEE6@976|Bacteroidetes,47MRU@768503|Cytophagia	976|Bacteroidetes	G	Glycosyl hydrolases family 15	-	-	-	-	-	-	-	-	-	-	-	-	Glyco_hydro_15
BYD3_k127_4895339_6	1168034.FH5T_04940	6.873e-93	312.0	COG0177@1|root,COG0177@2|Bacteria,4NE7K@976|Bacteroidetes,2FMKR@200643|Bacteroidia	976|Bacteroidetes	L	TIGR02757 family	-	-	-	-	-	-	-	-	-	-	-	-	DUF2400
BYD3_k127_4895339_7	926559.JoomaDRAFT_3471	6.514e-92	306.0	COG1136@1|root,COG1136@2|Bacteria,4NGDU@976|Bacteroidetes,1HWJY@117743|Flavobacteriia	976|Bacteroidetes	V	Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner	lolD	-	-	ko:K09810	ko02010,map02010	M00255	-	-	ko00000,ko00001,ko00002,ko01000,ko02000	3.A.1.125	-	-	ABC_tran
BYD3_k127_4895339_16	1168289.AJKI01000031_gene989	1.974e-17	86.0	COG1826@1|root,COG1826@2|Bacteria,4NUNH@976|Bacteroidetes,2FUYY@200643|Bacteroidia,3XKCQ@558415|Marinilabiliaceae	976|Bacteroidetes	U	mttA/Hcf106 family	tatA	-	-	ko:K03116	ko03060,ko03070,map03060,map03070	M00336	-	-	ko00000,ko00001,ko00002,ko02044	2.A.64	-	-	MttA_Hcf106
BYD3_k127_4895339_1	1408473.JHXO01000010_gene3507	6.976e-316	994.0	COG0341@1|root,COG0342@1|root,COG0341@2|Bacteria,COG0342@2|Bacteria,4NE1X@976|Bacteroidetes,2FMPX@200643|Bacteroidia	976|Bacteroidetes	U	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA	secD	-	-	ko:K03072,ko:K12257	ko02024,ko03060,ko03070,map02024,map03060,map03070	M00335	-	-	ko00000,ko00001,ko00002,ko02044	2.A.6.4,3.A.5.2,3.A.5.7	-	-	SecD_SecF,Sec_GG
BYD3_k127_4930419_1	1408473.JHXO01000001_gene2370	1.094e-169	544.0	COG0764@1|root,COG0774@1|root,COG0764@2|Bacteria,COG0774@2|Bacteria,4NEJ3@976|Bacteroidetes,2FM6X@200643|Bacteroidia	976|Bacteroidetes	IM	Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis	fabZ	-	3.5.1.108,4.2.1.59	ko:K16363	ko00061,ko00540,ko01100,ko01212,map00061,map00540,map01100,map01212	M00060,M00083	R04428,R04535,R04537,R04544,R04568,R04587,R04954,R04965	RC00166,RC00300,RC00831,RC01095	ko00000,ko00001,ko00002,ko01000,ko01004,ko01005	-	-	-	FabA,LpxC
BYD3_k127_4930419_6	1235803.C825_00791	2.462e-105	348.0	COG1043@1|root,COG1043@2|Bacteria,4NEBA@976|Bacteroidetes,2FKYH@200643|Bacteroidia,22WE5@171551|Porphyromonadaceae	976|Bacteroidetes	M	Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell	lpxA	-	2.3.1.129	ko:K00677	ko00540,ko01100,ko01503,map00540,map01100,map01503	M00060	R04567	RC00039,RC00055	ko00000,ko00001,ko00002,ko01000,ko01005	-	-	-	Acetyltransf_11,Hexapep
BYD3_k127_4930419_3	1408473.JHXO01000001_gene2372	2.039e-141	457.0	COG0611@1|root,COG0611@2|Bacteria,4NDUT@976|Bacteroidetes,2FN7K@200643|Bacteroidia	976|Bacteroidetes	H	Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1	thiL	-	2.7.4.16	ko:K00946	ko00730,ko01100,map00730,map01100	M00127	R00617	RC00002	ko00000,ko00001,ko00002,ko01000	-	-	-	AIRS,AIRS_C
BYD3_k127_4930419_0	431947.PGN_0357	8.418e-264	817.0	COG0719@1|root,COG0719@2|Bacteria,4NFXH@976|Bacteroidetes,2FMUZ@200643|Bacteroidia,22WAX@171551|Porphyromonadaceae	976|Bacteroidetes	O	Cysteine desulfurase	sufB	-	-	ko:K09014	-	-	-	-	ko00000	-	-	-	UPF0051
BYD3_k127_4930419_5	886379.AEWI01000037_gene2938	1.283e-123	400.0	COG0396@1|root,COG0396@2|Bacteria,4NEMY@976|Bacteroidetes,2FMCD@200643|Bacteroidia,3XIKR@558415|Marinilabiliaceae	976|Bacteroidetes	O	ATPases associated with a variety of cellular activities	sufC	-	-	ko:K09013	-	-	-	-	ko00000,ko02000	-	-	-	ABC_tran
BYD3_k127_4930419_4	1121129.KB903361_gene2976	1.065e-139	457.0	COG0719@1|root,COG0719@2|Bacteria,4NFPG@976|Bacteroidetes,2FNCN@200643|Bacteroidia,22VW3@171551|Porphyromonadaceae	976|Bacteroidetes	O	FeS assembly protein SufD	sufD	-	-	ko:K09015	-	-	-	-	ko00000	-	-	-	UPF0051
BYD3_k127_4930419_2	1121129.KB903361_gene2975	6.135e-161	516.0	COG0520@1|root,COG0520@2|Bacteria,4NDUB@976|Bacteroidetes,2FPF8@200643|Bacteroidia,22WTU@171551|Porphyromonadaceae	976|Bacteroidetes	E	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine	sufS	-	2.8.1.7,4.4.1.16	ko:K11717	ko00450,ko01100,map00450,map01100	-	R03599,R11528	RC00961,RC01789,RC02313	ko00000,ko00001,ko01000	-	-	-	Aminotran_5
BYD3_k127_4930419_7	411154.GFO_3127	5.089e-56	198.0	COG2166@1|root,COG2166@2|Bacteria,4NM9N@976|Bacteroidetes,1I187@117743|Flavobacteriia	976|Bacteroidetes	S	SufE protein probably involved in Fe-S center assembly	sufE	-	-	ko:K02426	-	-	-	-	ko00000	-	-	-	SufE
BYD3_k127_4930419_8	886379.AEWI01000037_gene2934	1.137e-34	136.0	COG2151@1|root,COG2151@2|Bacteria,4NSA9@976|Bacteroidetes,2FT2N@200643|Bacteroidia,3XKAC@558415|Marinilabiliaceae	976|Bacteroidetes	S	Pfam:DUF59	yitW	-	-	-	-	-	-	-	-	-	-	-	FeS_assembly_P
BYD3_k127_493785_11	435591.BDI_1805	1.377e-18	86.0	COG0378@1|root,COG0378@2|Bacteria,4NJ0P@976|Bacteroidetes,2FSAE@200643|Bacteroidia,22XN0@171551|Porphyromonadaceae	976|Bacteroidetes	KO	CobW/HypB/UreG, nucleotide-binding domain	hypB	-	-	ko:K04652	-	-	-	-	ko00000,ko03110	-	-	-	cobW
BYD3_k127_493785_5	1028805.GGC_1077	5.63e-59	207.0	COG0378@1|root,COG0378@2|Bacteria,1MVBD@1224|Proteobacteria,1RN9Y@1236|Gammaproteobacteria,1Y7VW@135625|Pasteurellales	135625|Pasteurellales	KO	Hydrogenase nickel incorporation protein HypB	hypB	-	-	ko:K04652	-	-	-	-	ko00000,ko03110	-	-	-	cobW
BYD3_k127_493785_10	1408473.JHXO01000006_gene1339	7.613e-32	128.0	COG4109@1|root,COG4109@2|Bacteria,4NTDQ@976|Bacteroidetes,2FTXG@200643|Bacteroidia	976|Bacteroidetes	K	DRTGG domain	-	-	-	-	-	-	-	-	-	-	-	-	DRTGG
BYD3_k127_493785_7	1168289.AJKI01000053_gene798	3.518e-52	188.0	COG2172@1|root,COG2172@2|Bacteria,4NRAS@976|Bacteroidetes,2FT57@200643|Bacteroidia,3XK5B@558415|Marinilabiliaceae	976|Bacteroidetes	T	Histidine kinase-like ATPase domain	-	-	-	-	-	-	-	-	-	-	-	-	HATPase_c,HATPase_c_2
BYD3_k127_493785_2	886379.AEWI01000010_gene624	2.055e-143	467.0	COG2000@1|root,COG2221@1|root,COG4624@1|root,COG2000@2|Bacteria,COG2221@2|Bacteria,COG4624@2|Bacteria,4NJAS@976|Bacteroidetes,2FMHZ@200643|Bacteroidia,3XJC2@558415|Marinilabiliaceae	976|Bacteroidetes	C	Putative Fe-S cluster	-	-	-	-	-	-	-	-	-	-	-	-	FeS,Fe_hyd_lg_C,Fer4,Fer4_6
BYD3_k127_493785_9	709991.Odosp_0190	1.971e-32	129.0	COG4109@1|root,COG4109@2|Bacteria,4NTA0@976|Bacteroidetes,2FTZ6@200643|Bacteroidia,22YI5@171551|Porphyromonadaceae	976|Bacteroidetes	K	DRTGG domain	-	-	-	-	-	-	-	-	-	-	-	-	DRTGG
BYD3_k127_493785_4	869213.JCM21142_41807	1.118e-66	235.0	COG1379@1|root,COG1379@2|Bacteria,4NP19@976|Bacteroidetes	976|Bacteroidetes	S	DNA polymerase alpha chain like domain	-	-	3.1.3.97	ko:K07053	-	-	R00188,R11188	RC00078	ko00000,ko01000	-	-	-	PHP,PHP_C
BYD3_k127_493785_8	1256908.HMPREF0373_01553	4.619e-43	164.0	COG4191@1|root,COG4191@2|Bacteria,1V6MN@1239|Firmicutes,24JDQ@186801|Clostridia,25X26@186806|Eubacteriaceae	186801|Clostridia	H	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase	-	-	-	-	-	-	-	-	-	-	-	-	HATPase_c
BYD3_k127_493785_6	1168289.AJKI01000053_gene803	1.124e-53	191.0	COG3411@1|root,COG3411@2|Bacteria,4NQQ2@976|Bacteroidetes,2FTGH@200643|Bacteroidia,3XK39@558415|Marinilabiliaceae	976|Bacteroidetes	C	Ferredoxin	-	-	1.12.1.3	ko:K17992	-	-	-	-	ko00000,ko01000	-	-	-	-
BYD3_k127_493785_1	869213.JCM21142_41811	1.402e-301	933.0	COG1894@1|root,COG1894@2|Bacteria,4NFB5@976|Bacteroidetes,47NNF@768503|Cytophagia	976|Bacteroidetes	C	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain	nuoF	-	1.12.1.3,1.6.5.3	ko:K00335,ko:K18331	ko00190,ko01100,map00190,map01100	M00144	R11945	RC00061	ko00000,ko00001,ko00002,ko01000	3.D.1	-	-	2Fe-2S_thioredx,Complex1_51K,Fer4,NADH_4Fe-4S,SLBB
BYD3_k127_493785_0	1168034.FH5T_03070	1.198e-303	938.0	COG3383@1|root,COG4624@1|root,COG3383@2|Bacteria,COG4624@2|Bacteria,4PKV4@976|Bacteroidetes,2FNTR@200643|Bacteroidia	976|Bacteroidetes	C	COG4624 Iron only hydrogenase large subunit C-terminal domain	hndD	-	1.12.1.3,1.17.1.9	ko:K00123,ko:K18332	ko00630,ko00680,ko01100,ko01120,ko01200,map00630,map00680,map01100,map01120,map01200	-	R00519	RC02796	ko00000,ko00001,ko01000	-	-	-	Fe_hyd_SSU,Fe_hyd_lg_C,Fer2_4,Fer4,Fer4_7,Molybdop_Fe4S4,Molybdopterin,Molydop_binding,NADH-G_4Fe-4S_3
BYD3_k127_493785_3	886379.AEWI01000010_gene617	2.399e-69	236.0	COG1905@1|root,COG1905@2|Bacteria,4NHIQ@976|Bacteroidetes,2FNZ6@200643|Bacteroidia,3XIIP@558415|Marinilabiliaceae	976|Bacteroidetes	C	Thioredoxin-like [2Fe-2S] ferredoxin	hndA	-	1.12.1.3	ko:K18330	-	-	-	-	ko00000,ko01000	-	-	-	2Fe-2S_thioredx
BYD3_k127_5024431_5	1380600.AUYN01000009_gene2109	8.339e-29	124.0	COG1629@1|root,COG1629@2|Bacteria,4NDXS@976|Bacteroidetes,1HWYV@117743|Flavobacteriia	976|Bacteroidetes	P	TonB-dependent receptor plug	-	-	-	-	-	-	-	-	-	-	-	-	CarbopepD_reg_2,Plug,STN,TonB_dep_Rec
BYD3_k127_5024431_1	926549.KI421517_gene2835	1.836e-131	437.0	COG0561@1|root,COG0561@2|Bacteria,4PMH7@976|Bacteroidetes	976|Bacteroidetes	S	SusD family	-	-	-	ko:K21572	-	-	-	-	ko00000,ko02000	8.A.46.1,8.A.46.3	-	-	SusD-like_3,SusD_RagB
BYD3_k127_5024431_0	926549.KI421517_gene2834	3.896e-183	597.0	COG4206@1|root,COG4206@2|Bacteria,4P258@976|Bacteroidetes,47TGD@768503|Cytophagia	976|Bacteroidetes	H	TonB dependent receptor	-	-	-	-	-	-	-	-	-	-	-	-	CarbopepD_reg_2,Plug,TonB_dep_Rec
BYD3_k127_5024431_2	471854.Dfer_2207	2.616e-67	239.0	COG4206@1|root,COG4206@2|Bacteria,4P258@976|Bacteroidetes,47TGD@768503|Cytophagia	976|Bacteroidetes	H	TonB dependent receptor	-	-	-	-	-	-	-	-	-	-	-	-	CarbopepD_reg_2,Plug,TonB_dep_Rec
BYD3_k127_5024431_3	1168034.FH5T_02570	1.414e-42	170.0	COG3712@1|root,COG3712@2|Bacteria,4P07V@976|Bacteroidetes,2FSTB@200643|Bacteroidia	976|Bacteroidetes	PT	Domain of unknown function (DUF4974)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4974,FecR
BYD3_k127_5024431_4	999419.HMPREF1077_01348	1.705e-30	126.0	COG1595@1|root,COG1595@2|Bacteria,4NRYN@976|Bacteroidetes,2FSYU@200643|Bacteroidia,230BZ@171551|Porphyromonadaceae	976|Bacteroidetes	K	Sigma-70, region 4	rpoE3	-	-	ko:K03088	-	-	-	-	ko00000,ko03021	-	-	-	Sigma70_r2,Sigma70_r4_2
BYD3_k127_5103492_5	926549.KI421517_gene2834	8.347e-52	188.0	COG4206@1|root,COG4206@2|Bacteria,4P258@976|Bacteroidetes,47TGD@768503|Cytophagia	976|Bacteroidetes	H	TonB dependent receptor	-	-	-	-	-	-	-	-	-	-	-	-	CarbopepD_reg_2,Plug,TonB_dep_Rec
BYD3_k127_5103492_1	471854.Dfer_2208	7.584e-139	458.0	COG0446@1|root,COG0446@2|Bacteria,4NDYU@976|Bacteroidetes,47T93@768503|Cytophagia	976|Bacteroidetes	S	Pfam:SusD	-	-	-	ko:K21572	-	-	-	-	ko00000,ko02000	8.A.46.1,8.A.46.3	-	-	SusD-like_3,SusD_RagB
BYD3_k127_5103492_2	761193.Runsl_2121	5.416e-126	437.0	COG1629@1|root,COG1629@2|Bacteria,4NF88@976|Bacteroidetes,47JEF@768503|Cytophagia	976|Bacteroidetes	P	Outer membrane protein beta-barrel family	-	-	-	-	-	-	-	-	-	-	-	-	CarbopepD_reg_2,CarboxypepD_reg,OMP_b-brl_3
BYD3_k127_5103492_7	760192.Halhy_0309	7.437e-31	132.0	28J3Q@1|root,2Z8ZW@2|Bacteria,4NGJW@976|Bacteroidetes,1IUBQ@117747|Sphingobacteriia	976|Bacteroidetes	S	Protein of unknown function (Porph_ging)	-	-	-	-	-	-	-	-	-	-	-	-	Porph_ging
BYD3_k127_5103492_4	761193.Runsl_2123	2.136e-65	243.0	COG5002@1|root,COG5002@2|Bacteria,4PP2P@976|Bacteroidetes,47YFN@768503|Cytophagia	976|Bacteroidetes	T	His Kinase A (phosphoacceptor) domain	-	-	-	-	-	-	-	-	-	-	-	-	HATPase_c,HisKA
BYD3_k127_5103492_3	761193.Runsl_2124	7.737e-70	243.0	COG0745@1|root,COG0745@2|Bacteria,4NGNK@976|Bacteroidetes,47M5N@768503|Cytophagia	976|Bacteroidetes	T	Transcriptional regulatory protein, C terminal	-	-	-	-	-	-	-	-	-	-	-	-	Response_reg,Trans_reg_C
BYD3_k127_5103492_0	1279009.ADICEAN_02558	4.027e-216	688.0	COG2304@1|root,COG2304@2|Bacteria,4NFX3@976|Bacteroidetes,47KQ9@768503|Cytophagia	976|Bacteroidetes	S	von Willebrand factor, type A	-	-	-	ko:K07114	-	-	-	-	ko00000,ko02000	1.A.13.2.2,1.A.13.2.3	-	-	CarbopepD_reg_2,DUF3520,VWA,vWF_A
BYD3_k127_5103492_6	153721.MYP_4508	7.518e-45	169.0	COG1595@1|root,COG1595@2|Bacteria,4NNEM@976|Bacteroidetes,47P9F@768503|Cytophagia	976|Bacteroidetes	K	TIGRFAM RNA polymerase sigma factor, sigma-70 family	-	-	-	ko:K03088	-	-	-	-	ko00000,ko03021	-	-	-	Sigma70_r2,Sigma70_r4_2
BYD3_k127_5103492_8	700598.Niako_7256	4.651e-07	62.0	COG4206@1|root,COG4774@1|root,COG4206@2|Bacteria,COG4774@2|Bacteria,4NFRU@976|Bacteroidetes,1INW7@117747|Sphingobacteriia	976|Bacteroidetes	H	PFAM TonB-dependent Receptor Plug	-	-	-	ko:K02014	-	-	-	-	ko00000,ko02000	1.B.14	-	-	CarbopepD_reg_2,Plug,TonB_dep_Rec
BYD3_k127_513025_5	1094466.KQS_09075	6.816e-16	78.0	COG0730@1|root,COG0730@2|Bacteria,4NTZ8@976|Bacteroidetes,1I2UM@117743|Flavobacteriia,2NWMD@237|Flavobacterium	976|Bacteroidetes	S	Sulfite exporter TauE/SafE	-	-	-	ko:K07090	-	-	-	-	ko00000	-	-	-	TauE
BYD3_k127_513025_0	1408433.JHXV01000010_gene496	7.026e-232	756.0	COG4775@1|root,COG4775@2|Bacteria,4NERT@976|Bacteroidetes,1I8E9@117743|Flavobacteriia,2PBCC@246874|Cryomorphaceae	976|Bacteroidetes	M	PFAM WD40-like beta Propeller	-	-	-	-	-	-	-	-	-	-	-	-	PD40
BYD3_k127_513025_2	1123008.KB905705_gene933	5.326e-165	523.0	COG0191@1|root,COG0191@2|Bacteria,4NF5C@976|Bacteroidetes,2FMMR@200643|Bacteroidia,22WHF@171551|Porphyromonadaceae	976|Bacteroidetes	G	Catalyzes the formation of glycerone phosphate and glyceraldehyde 3-phosphate from fructose 1,6, bisphosphate	fba	-	4.1.2.13	ko:K01624	ko00010,ko00030,ko00051,ko00680,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00030,map00051,map00680,map00710,map01100,map01110,map01120,map01130,map01200,map01230	M00001,M00003,M00165,M00167,M00344,M00345	R01068,R01070,R01829,R02568	RC00438,RC00439,RC00603,RC00604	ko00000,ko00001,ko00002,ko01000	-	-	-	F_bP_aldolase
BYD3_k127_513025_1	1519464.HY22_09440	2.34e-167	539.0	COG0531@1|root,COG0531@2|Bacteria	2|Bacteria	E	amino acid	-	-	-	ko:K03294	-	-	-	-	ko00000	2.A.3.2	-	-	AA_permease_2
BYD3_k127_513025_3	927658.AJUM01000034_gene575	3.202e-163	526.0	COG0534@1|root,COG0534@2|Bacteria	2|Bacteria	V	drug transmembrane transporter activity	norM-2	-	-	ko:K03327	-	-	-	-	ko00000,ko02000	2.A.66.1	-	-	MatE
BYD3_k127_513025_6	1131812.JQMS01000001_gene1430	1.228e-07	61.0	COG3040@1|root,COG3040@2|Bacteria,4NNFA@976|Bacteroidetes,1I2GH@117743|Flavobacteriia,2NUFN@237|Flavobacterium	976|Bacteroidetes	M	Lipocalin-like domain	-	-	-	ko:K03098	-	-	-	-	ko00000,ko04147	-	-	-	Lipocalin_2
BYD3_k127_513025_4	742767.HMPREF9456_00009	3.541e-138	443.0	COG1217@1|root,COG1217@2|Bacteria,4NDVM@976|Bacteroidetes,2FMNU@200643|Bacteroidia,22WPR@171551|Porphyromonadaceae	976|Bacteroidetes	T	GTP-binding protein TypA	typA	-	-	ko:K06207	-	-	-	-	ko00000	-	-	-	EFG_C,GTP_EFTU,GTP_EFTU_D2
BYD3_k127_5142582_11	1237149.C900_00650	1.625e-36	145.0	COG1943@1|root,COG1943@2|Bacteria,4NPWC@976|Bacteroidetes,47RHZ@768503|Cytophagia	976|Bacteroidetes	L	Transposase IS200 like	-	-	-	-	-	-	-	-	-	-	-	-	Y1_Tnp
BYD3_k127_5142582_5	1408473.JHXO01000001_gene2154	7.344e-113	373.0	COG1609@1|root,COG1609@2|Bacteria,4NDW6@976|Bacteroidetes,2FM9W@200643|Bacteroidia	976|Bacteroidetes	K	Transcriptional regulator, LacI family	cytR	-	-	ko:K02529,ko:K05499	-	-	-	-	ko00000,ko03000	-	-	-	LacI,Peripla_BP_1,Peripla_BP_3
BYD3_k127_5142582_1	1408473.JHXO01000004_gene137	2.724e-170	543.0	COG4198@1|root,COG4198@2|Bacteria,4NGQH@976|Bacteroidetes,2FN23@200643|Bacteroidia	976|Bacteroidetes	S	conserved protein	-	-	-	-	-	-	-	-	-	-	-	-	DUF1015
BYD3_k127_5142582_4	483215.BACFIN_06892	5.771e-120	393.0	COG1052@1|root,COG1052@2|Bacteria,4NFDE@976|Bacteroidetes,2FP6R@200643|Bacteroidia,4AKHC@815|Bacteroidaceae	976|Bacteroidetes	C	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family	serA	-	1.1.1.399,1.1.1.95	ko:K00058	ko00260,ko00680,ko01100,ko01120,ko01130,ko01200,ko01230,map00260,map00680,map01100,map01120,map01130,map01200,map01230	M00020	R01513	RC00031	ko00000,ko00001,ko00002,ko01000,ko04147	-	-	-	2-Hacid_dh,2-Hacid_dh_C
BYD3_k127_5142582_2	927658.AJUM01000047_gene2826	3.452e-152	488.0	COG1932@1|root,COG1932@2|Bacteria,4NE06@976|Bacteroidetes,2FMET@200643|Bacteroidia,3XJSG@558415|Marinilabiliaceae	976|Bacteroidetes	EH	Aminotransferase class-V	serC	GO:0003674,GO:0003824,GO:0004648,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006563,GO:0006564,GO:0006807,GO:0008150,GO:0008152,GO:0008483,GO:0008652,GO:0009058,GO:0009069,GO:0009070,GO:0009987,GO:0016053,GO:0016740,GO:0016769,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607	2.6.1.52	ko:K00831	ko00260,ko00680,ko00750,ko01100,ko01120,ko01130,ko01200,ko01230,map00260,map00680,map00750,map01100,map01120,map01130,map01200,map01230	M00020,M00124	R04173,R05085	RC00006,RC00036	ko00000,ko00001,ko00002,ko01000,ko01007	-	-	-	Aminotran_5
BYD3_k127_5142582_8	385682.AFSL01000003_gene1904	7.084e-86	289.0	COG2045@1|root,COG2045@2|Bacteria,4NG1A@976|Bacteroidetes,2FSD1@200643|Bacteroidia,3XKJU@558415|Marinilabiliaceae	976|Bacteroidetes	H	2-phosphosulpholactate phosphatase	comB	-	3.1.3.71	ko:K05979	ko00680,ko01120,map00680,map01120	M00358	R05789	RC00428	ko00000,ko00001,ko00002,ko01000	-	-	-	2-ph_phosp
BYD3_k127_5142582_0	886379.AEWI01000063_gene2290	1.783e-278	909.0	28I1Q@1|root,2Z869@2|Bacteria,4NH2E@976|Bacteroidetes,2G1ZT@200643|Bacteroidia,3XIMW@558415|Marinilabiliaceae	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_5142582_10	946077.W5A_05468	1.088e-61	222.0	COG2264@1|root,COG2264@2|Bacteria,4NFRW@976|Bacteroidetes,1HXXE@117743|Flavobacteriia	976|Bacteroidetes	J	Ribosomal protein L11 methyltransferase	prmA	-	-	ko:K02687	-	-	-	-	ko00000,ko01000,ko03009	-	-	-	PrmA
BYD3_k127_5142582_7	1121097.JCM15093_2033	3.083e-96	320.0	COG0149@1|root,COG2259@1|root,COG0149@2|Bacteria,COG2259@2|Bacteria,4NE2F@976|Bacteroidetes,2FNEK@200643|Bacteroidia,4AVCD@815|Bacteroidaceae	976|Bacteroidetes	G	Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P)	tpiA	GO:0003674,GO:0003824,GO:0004807,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006006,GO:0006066,GO:0006071,GO:0006081,GO:0006082,GO:0006090,GO:0006091,GO:0006094,GO:0006096,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0016051,GO:0016052,GO:0016053,GO:0016310,GO:0016853,GO:0016860,GO:0016861,GO:0017144,GO:0018130,GO:0019318,GO:0019319,GO:0019359,GO:0019362,GO:0019363,GO:0019400,GO:0019405,GO:0019438,GO:0019439,GO:0019563,GO:0019637,GO:0019682,GO:0019693,GO:0019751,GO:0019752,GO:0032787,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042866,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044262,GO:0044270,GO:0044271,GO:0044275,GO:0044281,GO:0044282,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046031,GO:0046034,GO:0046164,GO:0046166,GO:0046174,GO:0046184,GO:0046364,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046700,GO:0046939,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0090407,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1901615,GO:1901616	5.3.1.1	ko:K01803	ko00010,ko00051,ko00562,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00051,map00562,map00710,map01100,map01110,map01120,map01130,map01200,map01230	M00001,M00002,M00003	R01015	RC00423	ko00000,ko00001,ko00002,ko01000,ko04147	-	-	-	TIM
BYD3_k127_5142582_9	509635.N824_05160	1.82e-76	269.0	COG3214@1|root,COG3214@2|Bacteria,4NGF2@976|Bacteroidetes,1ISPP@117747|Sphingobacteriia	976|Bacteroidetes	S	Winged helix DNA-binding domain	-	-	-	-	-	-	-	-	-	-	-	-	HTH_42
BYD3_k127_5142582_3	1191523.MROS_2097	2.824e-131	426.0	COG0407@1|root,COG0407@2|Bacteria	2|Bacteria	H	Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III	-	-	4.1.1.37	ko:K01599	ko00860,ko01100,ko01110,map00860,map01100,map01110	M00121	R03197,R04972	RC00872	ko00000,ko00001,ko00002,ko01000	-	-	-	URO-D
BYD3_k127_5142582_6	1191523.MROS_2095	1.008e-108	359.0	COG0646@1|root,COG0646@2|Bacteria	2|Bacteria	E	methionine synthase	-	-	2.1.1.13	ko:K00548	ko00270,ko00450,ko00670,ko01100,ko01110,ko01230,map00270,map00450,map00670,map01100,map01110,map01230	M00017	R00946,R09365	RC00035,RC00113,RC01241	ko00000,ko00001,ko00002,ko01000	-	-	-	S-methyl_trans
BYD3_k127_5142582_12	357276.EL88_07690	1.2e-33	138.0	COG1410@1|root,COG1410@2|Bacteria,4NQ85@976|Bacteroidetes,2FMYK@200643|Bacteroidia,4APAQ@815|Bacteroidaceae	976|Bacteroidetes	E	Vitamin B12 dependent methionine synthase, activation domain protein	-	-	-	-	-	-	-	-	-	-	-	-	Met_synt_B12
BYD3_k127_5155232_1	1121904.ARBP01000011_gene1522	2.721e-82	292.0	2DBP2@1|root,2ZA71@2|Bacteria,4NFFI@976|Bacteroidetes,47NDZ@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_5155232_3	1410613.JNKF01000017_gene1864	3.966e-12	71.0	COG3250@1|root,COG3250@2|Bacteria,4NK0C@976|Bacteroidetes,2FQSH@200643|Bacteroidia	976|Bacteroidetes	G	Belongs to the glycosyl hydrolase 2 family	-	-	-	-	-	-	-	-	-	-	-	-	Glyco_hydro_2,Glyco_hydro_2_C,Glyco_hydro_2_N
BYD3_k127_5155232_0	1121918.ARWE01000001_gene744	2e-251	790.0	COG2192@1|root,COG2192@2|Bacteria,1MWBA@1224|Proteobacteria,42N15@68525|delta/epsilon subdivisions,2WJ0Y@28221|Deltaproteobacteria,43U63@69541|Desulfuromonadales	28221|Deltaproteobacteria	O	Carbamoyltransferase C-terminus	-	-	-	ko:K00612	-	-	-	-	ko00000,ko01000	-	-	-	Carbam_trans_C,Carbam_trans_N
BYD3_k127_5155232_2	1121456.ATVA01000014_gene680	1.024e-14	74.0	2EGPU@1|root,33AFZ@2|Bacteria,1NH69@1224|Proteobacteria,42X36@68525|delta/epsilon subdivisions,2WSNU@28221|Deltaproteobacteria,2MDMZ@213115|Desulfovibrionales	28221|Deltaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_5155232_4	411154.GFO_3196	3.577e-11	64.0	2CH0Y@1|root,3309M@2|Bacteria,4NY17@976|Bacteroidetes,1I6TX@117743|Flavobacteriia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_5162439_0	1168034.FH5T_16930	1.165e-225	728.0	COG0755@1|root,COG0755@2|Bacteria,4NDY1@976|Bacteroidetes,2FKZ1@200643|Bacteroidia	976|Bacteroidetes	O	cytochrome c-type biogenesis protein CcsB	ccsA	-	-	-	-	-	-	-	-	-	-	-	Cytochrom_C_asm,ResB
BYD3_k127_5180922_2	153721.MYP_1208	6.59e-24	102.0	COG0431@1|root,COG0431@2|Bacteria,4NN31@976|Bacteroidetes,47SD0@768503|Cytophagia	976|Bacteroidetes	S	NADPH-dependent FMN reductase	-	-	-	-	-	-	-	-	-	-	-	-	FMN_red
BYD3_k127_5180922_1	694427.Palpr_0201	2.189e-47	174.0	COG3467@1|root,COG3467@2|Bacteria,4NPGX@976|Bacteroidetes,2FSZ2@200643|Bacteroidia,22YF9@171551|Porphyromonadaceae	976|Bacteroidetes	S	Pyridoxamine 5'-phosphate oxidase	-	-	-	ko:K07005	-	-	-	-	ko00000	-	-	-	Pyridox_ox_2
BYD3_k127_5180922_0	1408473.JHXO01000008_gene2845	7.127e-75	275.0	COG1629@1|root,COG4771@2|Bacteria,4NEIG@976|Bacteroidetes,2FM1K@200643|Bacteroidia	976|Bacteroidetes	P	TonB-dependent receptor	-	-	-	-	-	-	-	-	-	-	-	-	CarbopepD_reg_2,CarboxypepD_reg,OMP_b-brl_3,Plug
BYD3_k127_5210310_1	1168034.FH5T_04310	1.621e-134	440.0	COG0577@1|root,COG0577@2|Bacteria,4NEBD@976|Bacteroidetes,2FWBI@200643|Bacteroidia	976|Bacteroidetes	V	MacB-like periplasmic core domain	-	-	-	ko:K02004	-	M00258	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	FtsX,MacB_PCD
BYD3_k127_5210310_5	385682.AFSL01000003_gene1912	8.37e-33	132.0	2AD7J@1|root,312WH@2|Bacteria,4NR1A@976|Bacteroidetes,2G24U@200643|Bacteroidia,3XK3Q@558415|Marinilabiliaceae	976|Bacteroidetes	S	Domain of unknown function (DUF1987)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1987
BYD3_k127_5210310_3	1279009.ADICEAN_02198	1.921e-42	161.0	COG2353@1|root,COG2353@2|Bacteria,4NSJH@976|Bacteroidetes,47QHY@768503|Cytophagia	976|Bacteroidetes	S	Belongs to the UPF0312 family	-	-	-	-	-	-	-	-	-	-	-	-	YceI
BYD3_k127_5210310_2	1279009.ADICEAN_02197	1.493e-90	306.0	COG3637@1|root,COG3637@2|Bacteria,4NE33@976|Bacteroidetes,47NZ9@768503|Cytophagia	976|Bacteroidetes	M	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_5210310_6	485918.Cpin_6394	2.532e-23	107.0	COG2010@1|root,COG2010@2|Bacteria	2|Bacteria	C	Cytochrome c	-	-	-	-	-	-	-	-	-	-	-	-	Cytochrome_CBB3,PSCyt1
BYD3_k127_5210310_4	1122176.KB903565_gene3341	2.166e-36	150.0	COG2010@1|root,COG2010@2|Bacteria	2|Bacteria	C	Cytochrome c	-	-	-	-	-	-	-	-	-	-	-	-	PSCyt1
BYD3_k127_5210310_9	344747.PM8797T_29977	0.0001854	53.0	COG2010@1|root,COG2319@1|root,COG2010@2|Bacteria,COG2319@2|Bacteria,2IY5Q@203682|Planctomycetes	203682|Planctomycetes	M	WD domain, G-beta repeat	-	-	-	-	-	-	-	-	-	-	-	-	Big_2,PSCyt1,PSCyt2,PSD1,WD40
BYD3_k127_5210310_0	1121373.KB903625_gene3235	2.266e-171	545.0	COG0057@1|root,COG0057@2|Bacteria,4NEMF@976|Bacteroidetes,47KPU@768503|Cytophagia	976|Bacteroidetes	G	Belongs to the glyceraldehyde-3-phosphate dehydrogenase family	gap	-	1.2.1.12	ko:K00134	ko00010,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04066,ko05010,map00010,map00710,map01100,map01110,map01120,map01130,map01200,map01230,map04066,map05010	M00001,M00002,M00003,M00165,M00166,M00308,M00552	R01061	RC00149	ko00000,ko00001,ko00002,ko01000,ko04131,ko04147	-	-	-	Gp_dh_C,Gp_dh_N
BYD3_k127_5210310_7	1453500.AT05_03175	3.504e-22	106.0	28MPU@1|root,2ZAYW@2|Bacteria,4NXA9@976|Bacteroidetes	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_5242130_1	1286631.X805_32890	8.396e-96	325.0	COG0399@1|root,COG0399@2|Bacteria,1MUPN@1224|Proteobacteria,2VJDZ@28216|Betaproteobacteria,1KM07@119065|unclassified Burkholderiales	28216|Betaproteobacteria	E	DegT/DnrJ/EryC1/StrS aminotransferase family	-	-	2.6.1.102	ko:K13010	ko00520,map00520	-	R10460	RC00006,RC00781	ko00000,ko00001,ko01000,ko01005,ko01007	-	-	-	Acetyltransf_3,CBS,DegT_DnrJ_EryC1
BYD3_k127_5242130_0	1123277.KB893195_gene5517	9.267e-100	336.0	COG0500@1|root,COG1215@1|root,COG1215@2|Bacteria,COG2226@2|Bacteria,4NJWI@976|Bacteroidetes,47KMN@768503|Cytophagia	976|Bacteroidetes	MQ	Glycosyltransferase like family 2	-	-	-	-	-	-	-	-	-	-	-	-	Glycos_transf_2,Methyltransf_23
BYD3_k127_5250375_4	1408473.JHXO01000008_gene2798	8.196e-23	108.0	COG1629@1|root,COG4771@2|Bacteria,4NF4B@976|Bacteroidetes,2FM7I@200643|Bacteroidia	976|Bacteroidetes	P	TonB-dependent receptor	-	-	-	-	-	-	-	-	-	-	-	-	CarbopepD_reg_2,Plug,TonB_dep_Rec
BYD3_k127_5250375_1	1121904.ARBP01000028_gene1710	3.024e-205	647.0	COG0673@1|root,COG0673@2|Bacteria,4NIF1@976|Bacteroidetes,47JIW@768503|Cytophagia	976|Bacteroidetes	S	Oxidoreductase family, C-terminal alpha beta domain	-	-	-	-	-	-	-	-	-	-	-	-	GFO_IDH_MocA,GFO_IDH_MocA_C
BYD3_k127_5250375_2	1408473.JHXO01000007_gene962	4.361e-100	339.0	COG0477@1|root,COG2814@2|Bacteria,4NI1T@976|Bacteroidetes,2FRJG@200643|Bacteroidia	976|Bacteroidetes	EGP	Major Facilitator Superfamily	-	-	-	-	-	-	-	-	-	-	-	-	MFS_1
BYD3_k127_5250375_5	340177.Cag_0446	1.001e-16	82.0	2E3TC@1|root,32YQV@2|Bacteria	2|Bacteria	S	copG family	-	-	-	-	-	-	-	-	-	-	-	-	CopG_antitoxin
BYD3_k127_5250375_3	909663.KI867150_gene1188	1.047e-27	115.0	COG2929@1|root,COG2929@2|Bacteria,1MZKJ@1224|Proteobacteria,42VVB@68525|delta/epsilon subdivisions	1224|Proteobacteria	S	Ribonuclease toxin, BrnT, of type II toxin-antitoxin system	-	-	-	ko:K09803	-	-	-	-	ko00000	-	-	-	BrnT_toxin
BYD3_k127_5250375_0	483216.BACEGG_03644	2.728e-245	766.0	COG3119@1|root,COG3119@2|Bacteria,4NHH7@976|Bacteroidetes,2FMAW@200643|Bacteroidia,4AK8N@815|Bacteroidaceae	976|Bacteroidetes	P	COG COG3119 Arylsulfatase A and related enzymes	mdsA	-	-	-	-	-	-	-	-	-	-	-	DUF4976,Sulfatase
BYD3_k127_525428_10	56780.SYN_01954	1.384e-46	178.0	COG4585@1|root,COG4585@2|Bacteria,1MWPN@1224|Proteobacteria,42RUN@68525|delta/epsilon subdivisions,2WNJZ@28221|Deltaproteobacteria,2MR4S@213462|Syntrophobacterales	28221|Deltaproteobacteria	T	Histidine kinase	-	-	-	-	-	-	-	-	-	-	-	-	CHASE4,HAMP,HATPase_c,HisKA_3,PAS_3,PAS_4,PAS_9
BYD3_k127_525428_4	1124780.ANNU01000032_gene1222	3.706e-136	447.0	COG1538@1|root,COG1538@2|Bacteria,4NDZK@976|Bacteroidetes,47XKT@768503|Cytophagia	976|Bacteroidetes	MU	Outer membrane efflux protein	-	-	-	ko:K18139	ko01501,ko02024,map01501,map02024	M00642,M00643,M00647,M00718,M00768,M00822	-	-	ko00000,ko00001,ko00002,ko01504,ko02000	1.B.17,2.A.6.2	-	-	OEP
BYD3_k127_525428_3	1124780.ANNU01000032_gene1223	1.976e-145	471.0	COG0845@1|root,COG0845@2|Bacteria,4NF0X@976|Bacteroidetes,47U0H@768503|Cytophagia	976|Bacteroidetes	M	Barrel-sandwich domain of CusB or HlyD membrane-fusion	-	-	-	-	-	-	-	-	-	-	-	-	HlyD_3,HlyD_D23
BYD3_k127_525428_0	1168289.AJKI01000031_gene931	0.0	1521.0	COG0841@1|root,COG0841@2|Bacteria,4NDZG@976|Bacteroidetes	976|Bacteroidetes	V	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family	-	-	-	-	-	-	-	-	-	-	-	-	ACR_tran
BYD3_k127_525428_5	1123248.KB893327_gene788	8.062e-122	396.0	COG0258@1|root,COG0258@2|Bacteria	2|Bacteria	L	nuclease activity	polA	GO:0003674,GO:0003676,GO:0003677,GO:0003824,GO:0003887,GO:0004518,GO:0004527,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006281,GO:0006284,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008408,GO:0008409,GO:0009058,GO:0009059,GO:0009987,GO:0016740,GO:0016772,GO:0016779,GO:0016787,GO:0016788,GO:0018130,GO:0019438,GO:0033554,GO:0034061,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0071897,GO:0090304,GO:0090305,GO:0097159,GO:0140097,GO:1901360,GO:1901362,GO:1901363,GO:1901576	2.7.7.7	ko:K02335	ko00230,ko00240,ko01100,ko03030,ko03410,ko03420,ko03440,map00230,map00240,map01100,map03030,map03410,map03420,map03440	-	R00375,R00376,R00377,R00378	RC02795	ko00000,ko00001,ko01000,ko03032,ko03400	-	-	-	5_3_exonuc,5_3_exonuc_N,DNA_pol_A,DNA_pol_A_exo1
BYD3_k127_525428_7	1408473.JHXO01000010_gene3529	1.492e-97	331.0	COG3659@1|root,COG3659@2|Bacteria,4NPV2@976|Bacteroidetes	976|Bacteroidetes	M	wide pore channel activity	-	-	-	-	-	-	-	-	-	-	-	-	OprB
BYD3_k127_525428_6	929556.Solca_3634	3.431e-116	379.0	COG0500@1|root,COG2226@2|Bacteria,4NEUC@976|Bacteroidetes,1IP66@117747|Sphingobacteriia	976|Bacteroidetes	Q	Methylase involved in ubiquinone menaquinone biosynthesis	arsM	-	2.1.1.137	ko:K07755	-	-	-	-	ko00000,ko01000	-	-	-	Methyltransf_11,Methyltransf_31
BYD3_k127_525428_8	694427.Palpr_1806	1.519e-62	217.0	COG0394@1|root,COG0394@2|Bacteria,4NNN6@976|Bacteroidetes,2FSB5@200643|Bacteroidia,22Y30@171551|Porphyromonadaceae	976|Bacteroidetes	T	Low molecular weight phosphatase family	arsC	-	1.20.4.1	ko:K03741	-	-	-	-	ko00000,ko01000	-	-	-	LMWPc
BYD3_k127_525428_11	1380384.JADN01000004_gene1905	6.781e-29	120.0	COG0640@1|root,COG0640@2|Bacteria,4NQK3@976|Bacteroidetes,1I2TQ@117743|Flavobacteriia	976|Bacteroidetes	K	transcriptional regulator	-	-	-	-	-	-	-	-	-	-	-	-	HTH_20,HTH_5
BYD3_k127_525428_2	1408473.JHXO01000007_gene697	4.888e-165	525.0	COG0798@1|root,COG0798@2|Bacteria,4NFG7@976|Bacteroidetes,2FN4J@200643|Bacteroidia	976|Bacteroidetes	P	COG0798 Arsenite efflux pump ACR3 and related	acr3	-	-	ko:K03325	-	-	-	-	ko00000,ko02000	2.A.59	-	-	SBF
BYD3_k127_525428_9	1168034.FH5T_14830	2.399e-60	217.0	COG0345@1|root,COG0345@2|Bacteria	2|Bacteria	E	pyrroline-5-carboxylate reductase activity	proC	-	1.5.1.2	ko:K00286	ko00330,ko01100,ko01110,ko01130,ko01230,map00330,map01100,map01110,map01130,map01230	M00015	R01248,R01251,R03291,R03293	RC00054,RC00083	ko00000,ko00001,ko00002,ko01000	-	-	-	F420_oxidored,P5CR_dimer
BYD3_k127_525428_1	385682.AFSL01000019_gene2201	3.079e-184	581.0	COG0701@1|root,COG0701@2|Bacteria,4NJME@976|Bacteroidetes,2FQNA@200643|Bacteroidia,3XJWS@558415|Marinilabiliaceae	976|Bacteroidetes	S	Predicted permease	-	-	-	ko:K07089	-	-	-	-	ko00000	-	-	-	ArsP_1
BYD3_k127_5296612_4	1282361.ABAC402_10870	5.238e-06	51.0	COG5434@1|root,COG5434@2|Bacteria,1MXP8@1224|Proteobacteria,2TT1A@28211|Alphaproteobacteria	28211|Alphaproteobacteria	G	Belongs to the glycosyl hydrolase 28 family	-	-	-	-	-	-	-	-	-	-	-	-	Glyco_hydro_28
BYD3_k127_5296612_3	797299.HALLA_02840	8.747e-31	127.0	arCOG02521@1|root,arCOG02521@2157|Archaea,2XVSU@28890|Euryarchaeota,23UVK@183963|Halobacteria	183963|Halobacteria	S	Glycosyl hydrolases family 28	-	-	-	-	-	-	-	-	-	-	-	-	Glyco_hydro_28
BYD3_k127_5296612_0	929556.Solca_2528	1.031e-117	401.0	COG0308@1|root,COG0308@2|Bacteria,4NFNJ@976|Bacteroidetes,1IR1K@117747|Sphingobacteriia	976|Bacteroidetes	E	Peptidase family M1 domain	-	-	-	-	-	-	-	-	-	-	-	-	Peptidase_M1
BYD3_k127_5296612_2	386456.JQKN01000017_gene846	1.502e-37	145.0	COG4832@1|root,arCOG03571@1|root,arCOG03201@2157|Archaea,arCOG03571@2157|Archaea,2Y3NU@28890|Euryarchaeota	28890|Euryarchaeota	S	GyrI-like small molecule binding domain	-	-	-	-	-	-	-	-	-	-	-	-	GyrI-like
BYD3_k127_5296612_1	1408473.JHXO01000010_gene3732	1.127e-77	267.0	COG3266@1|root,COG3266@2|Bacteria,4NMES@976|Bacteroidetes,2FU8B@200643|Bacteroidia	976|Bacteroidetes	S	domain, Protein	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_5354087_5	1121100.JCM6294_3011	6.896e-131	423.0	COG0404@1|root,COG0404@2|Bacteria,4NF7S@976|Bacteroidetes,2FPDM@200643|Bacteroidia,4AMEQ@815|Bacteroidaceae	976|Bacteroidetes	H	The glycine cleavage system catalyzes the degradation of glycine	gcvT	-	2.1.2.10	ko:K00605	ko00260,ko00630,ko00670,ko01100,ko01110,ko01130,ko01200,map00260,map00630,map00670,map01100,map01110,map01130,map01200	M00532	R01221,R02300,R04125	RC00022,RC00069,RC00183,RC02834	ko00000,ko00001,ko00002,ko01000	-	-	-	GCV_T,GCV_T_C
BYD3_k127_5354087_6	1168034.FH5T_19695	1.592e-104	345.0	COG1136@1|root,COG1136@2|Bacteria,4NE5N@976|Bacteroidetes,2FQN3@200643|Bacteroidia	976|Bacteroidetes	V	ABC transporter	macB	-	-	ko:K02003	-	M00258	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	ABC_tran
BYD3_k127_5354087_12	929713.NIASO_03755	1.55e-32	137.0	COG4122@1|root,COG4122@2|Bacteria,4NG1S@976|Bacteroidetes,1IXCE@117747|Sphingobacteriia	976|Bacteroidetes	S	Methyltransferase domain	-	-	-	-	-	-	-	-	-	-	-	-	Methyltransf_24
BYD3_k127_5354087_0	886379.AEWI01000211_gene2519	3.634e-280	877.0	COG1200@1|root,COG1200@2|Bacteria,4NDZV@976|Bacteroidetes,2FNKB@200643|Bacteroidia,3XJMH@558415|Marinilabiliaceae	976|Bacteroidetes	L	RecG wedge domain	recG	-	3.6.4.12	ko:K03655	ko03440,map03440	-	-	-	ko00000,ko00001,ko01000,ko03400	-	-	-	DEAD,Helicase_C,RecG_wedge
BYD3_k127_5354087_1	983544.Lacal_1650	9.693e-209	662.0	COG0457@1|root,COG0457@2|Bacteria,4NFIY@976|Bacteroidetes,1HYA6@117743|Flavobacteriia	976|Bacteroidetes	S	PFAM Peptidase family M49	-	-	-	-	-	-	-	-	-	-	-	-	Peptidase_M49
BYD3_k127_5354087_7	1047013.AQSP01000081_gene101	7.847e-95	313.0	COG0463@1|root,COG0463@2|Bacteria	2|Bacteria	M	Glycosyl transferase, family 2	-	-	-	-	-	-	-	-	-	-	-	-	Glycos_transf_2
BYD3_k127_5354087_14	1144313.PMI10_02846	4.256e-14	73.0	COG0463@1|root,COG0463@2|Bacteria,4PKIQ@976|Bacteroidetes,1HZHQ@117743|Flavobacteriia,2NVH2@237|Flavobacterium	976|Bacteroidetes	M	Glycosyl transferase family 2	-	-	-	-	-	-	-	-	-	-	-	-	Glycos_transf_2
BYD3_k127_5354087_3	1122176.KB903537_gene1695	6.014e-144	476.0	COG1807@1|root,COG1807@2|Bacteria,4NE7V@976|Bacteroidetes,1IWP1@117747|Sphingobacteriia	976|Bacteroidetes	M	Dolichyl-phosphate-mannose-protein mannosyltransferase	-	-	-	-	-	-	-	-	-	-	-	-	PMT_2
BYD3_k127_5354087_13	313606.M23134_08276	1.198e-31	132.0	COG0671@1|root,COG0671@2|Bacteria,4NV5Q@976|Bacteroidetes,47R92@768503|Cytophagia	976|Bacteroidetes	I	Acid phosphatase homologues	-	-	-	-	-	-	-	-	-	-	-	-	PAP2
BYD3_k127_5354087_8	1284775.HMPREF1640_01315	1.161e-75	258.0	COG4657@1|root,COG4657@2|Bacteria,4NGEZ@976|Bacteroidetes,2FM9J@200643|Bacteroidia	976|Bacteroidetes	C	Part of a membrane complex involved in electron transport	rnfA	-	-	ko:K03617	-	-	-	-	ko00000	-	-	-	Rnf-Nqr
BYD3_k127_5354087_9	1408473.JHXO01000005_gene1633	9.067e-74	253.0	COG4660@1|root,COG4660@2|Bacteria,4NHHP@976|Bacteroidetes,2FM8R@200643|Bacteroidia	976|Bacteroidetes	C	Part of a membrane complex involved in electron transport	rnfE	-	-	ko:K03613	-	-	-	-	ko00000	-	-	-	Rnf-Nqr
BYD3_k127_5354087_11	665571.STHERM_c12850	1.634e-48	179.0	COG4659@1|root,COG4659@2|Bacteria	2|Bacteria	C	FMN binding	rnfG	GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944	-	ko:K03612	-	-	-	-	ko00000	-	-	-	FMN_bind
BYD3_k127_5354087_4	1168289.AJKI01000031_gene1115	2.043e-132	430.0	COG4658@1|root,COG4658@2|Bacteria,4NESE@976|Bacteroidetes,2FM2Y@200643|Bacteroidia,3XIVH@558415|Marinilabiliaceae	976|Bacteroidetes	C	NQR2, RnfD, RnfE family	rnfD	-	-	ko:K03614	-	-	-	-	ko00000	-	-	-	NQR2_RnfD_RnfE
BYD3_k127_5354087_2	1168034.FH5T_16600	1.516e-186	592.0	COG4656@1|root,COG4656@2|Bacteria,4NIS7@976|Bacteroidetes,2FMAQ@200643|Bacteroidia	976|Bacteroidetes	C	Part of a membrane complex involved in electron transport	rnfC	-	-	ko:K03615	-	-	-	-	ko00000	-	-	-	Complex1_51K,Fer4_10,Fer4_17,Fer4_7,RnfC_N,SLBB
BYD3_k127_5354087_10	1211813.CAPH01000006_gene1517	3.164e-70	241.0	COG1148@1|root,COG2878@1|root,COG1148@2|Bacteria,COG2878@2|Bacteria,4NFEB@976|Bacteroidetes,2FMPN@200643|Bacteroidia	976|Bacteroidetes	C	electron transport complex, RnfABCDGE type, B subunit	rnfB	-	-	ko:K03616	-	-	-	-	ko00000	-	-	-	FeS,Fer4
BYD3_k127_5362730_4	485918.Cpin_6618	5.429e-35	139.0	COG0637@1|root,COG0637@2|Bacteria,4NID6@976|Bacteroidetes	976|Bacteroidetes	S	TIGRFAM HAD-superfamily hydrolase, subfamily IA, variant 3	-	-	3.1.3.23	ko:K19270	-	-	-	-	ko00000,ko01000	-	-	-	HAD_2
BYD3_k127_5362730_1	1499967.BAYZ01000045_gene2649	1.846e-182	581.0	COG0498@1|root,COG0498@2|Bacteria,2NQNZ@2323|unclassified Bacteria	2|Bacteria	E	Threonine synthase N terminus	thrC	GO:0003674,GO:0003824,GO:0004795,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006566,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009066,GO:0009067,GO:0009088,GO:0009987,GO:0016053,GO:0016829,GO:0016835,GO:0016838,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607	4.2.3.1	ko:K01733	ko00260,ko00750,ko01100,ko01110,ko01120,ko01230,map00260,map00750,map01100,map01110,map01120,map01230	M00018	R01466,R05086	RC00017,RC00526	ko00000,ko00001,ko00002,ko01000	-	-	iLF82_1304.LF82_2261,iNRG857_1313.NRG857_00025	PALP,Thr_synth_N
BYD3_k127_5362730_2	1121405.dsmv_3243	2.753e-73	252.0	COG0560@1|root,COG0560@2|Bacteria,1MZPG@1224|Proteobacteria,42Q82@68525|delta/epsilon subdivisions,2WMBU@28221|Deltaproteobacteria,2MI8W@213118|Desulfobacterales	28221|Deltaproteobacteria	E	phosphoserine phosphatase homoserine phosphotransferase bifunctional protein	-	-	2.7.1.39,3.1.3.3	ko:K02203	ko00260,ko00680,ko01100,ko01110,ko01120,ko01130,ko01230,map00260,map00680,map01100,map01110,map01120,map01130,map01230	M00018	R00582,R01771	RC00002,RC00017	ko00000,ko00001,ko00002,ko01000	-	-	-	HAD
BYD3_k127_5362730_0	927658.AJUM01000022_gene1260	0.0	1045.0	COG0022@1|root,COG1071@1|root,COG0022@2|Bacteria,COG1071@2|Bacteria,4NE4A@976|Bacteroidetes,2FX71@200643|Bacteroidia,3XJTK@558415|Marinilabiliaceae	976|Bacteroidetes	C	Transketolase, pyrimidine binding domain	pdhB	-	2.2.1.1	ko:K00615	ko00030,ko00710,ko01051,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00710,map01051,map01100,map01110,map01120,map01130,map01200,map01230	M00004,M00007,M00165,M00167	R01067,R01641,R01830,R06590	RC00032,RC00226,RC00571,RC01560	ko00000,ko00001,ko00002,ko01000	-	-	-	E1_dh,Transket_pyr,Transketolase_C
BYD3_k127_5362730_3	1168034.FH5T_21780	3.227e-61	216.0	COG1678@1|root,COG1678@2|Bacteria,4NFQA@976|Bacteroidetes,2FM82@200643|Bacteroidia	976|Bacteroidetes	K	Belongs to the UPF0301 (AlgH) family	-	-	-	ko:K07735	-	-	-	-	ko00000,ko03000	-	-	-	DUF179
BYD3_k127_5369897_5	402612.FP0310	8.17e-97	327.0	COG3407@1|root,COG3407@2|Bacteria,4NDYX@976|Bacteroidetes,1HY6U@117743|Flavobacteriia,2NTUF@237|Flavobacterium	976|Bacteroidetes	I	diphosphomevalonate decarboxylase	mvaD	-	4.1.1.33	ko:K01597	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	M00095	R01121	RC00453	ko00000,ko00001,ko00002,ko01000	-	-	-	-
BYD3_k127_5369897_7	1347342.BN863_29730	2.344e-62	226.0	COG1577@1|root,COG1577@2|Bacteria,4NEXC@976|Bacteroidetes,1HY6C@117743|Flavobacteriia	976|Bacteroidetes	I	GHMP Kinase	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_5369897_3	1313421.JHBV01000027_gene1831	7.644e-127	418.0	COG1257@1|root,COG1257@2|Bacteria,4NGNG@976|Bacteroidetes	976|Bacteroidetes	I	Belongs to the HMG-CoA reductase family	mvaA	-	1.1.1.88	ko:K00054	ko00900,ko01110,ko01130,map00900,map01110,map01130	-	R02081	RC00004,RC00644	ko00000,ko00001,ko01000	-	-	-	HMG-CoA_red
BYD3_k127_5369897_4	984262.SGRA_3437	4.418e-117	386.0	COG1304@1|root,COG1304@2|Bacteria,4NJPE@976|Bacteroidetes,1IYN1@117747|Sphingobacteriia	976|Bacteroidetes	C	COG1304 L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid	-	-	5.3.3.2	ko:K01823	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	M00095,M00096,M00364,M00365,M00366,M00367	R01123	RC00455	ko00000,ko00001,ko00002,ko01000	-	-	-	FMN_dh
BYD3_k127_5369897_1	1168289.AJKI01000001_gene3669	2.417e-168	536.0	COG1960@1|root,COG1960@2|Bacteria,4NEHA@976|Bacteroidetes,2FR12@200643|Bacteroidia,3XJTI@558415|Marinilabiliaceae	976|Bacteroidetes	I	Acyl-CoA dehydrogenase, C-terminal domain	acdA	-	1.3.8.1	ko:K00248	ko00071,ko00280,ko00650,ko01100,ko01110,ko01120,ko01200,ko01212,map00071,map00280,map00650,map01100,map01110,map01120,map01200,map01212	-	R01175,R01178,R02661,R03172,R04751	RC00052,RC00068,RC00076,RC00120,RC00148	ko00000,ko00001,ko01000	-	-	-	Acyl-CoA_dh_1,Acyl-CoA_dh_M,Acyl-CoA_dh_N
BYD3_k127_5369897_2	929713.NIASO_10100	1.879e-144	481.0	COG4770@1|root,COG4770@2|Bacteria,4NM1W@976|Bacteroidetes,1IPSQ@117747|Sphingobacteriia	976|Bacteroidetes	I	TIGRFAM acetyl-CoA carboxylase, biotin carboxylase	-	-	6.3.4.14,6.4.1.2,6.4.1.3,6.4.1.4	ko:K01961,ko:K01965,ko:K01968	ko00061,ko00280,ko00620,ko00630,ko00640,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00061,map00280,map00620,map00630,map00640,map00720,map01100,map01110,map01120,map01130,map01200,map01212	M00036,M00082,M00373,M00376,M00741	R00742,R01859,R04138,R04385	RC00040,RC00097,RC00253,RC00367,RC00609,RC00942	ko00000,ko00001,ko00002,ko01000	-	-	-	Biotin_carb_C,Biotin_carb_N,Biotin_lipoyl,CPSase_L_D2
BYD3_k127_5369897_6	1122605.KB893645_gene1124	2.147e-63	226.0	COG1024@1|root,COG1024@2|Bacteria,4NI32@976|Bacteroidetes,1IT4Y@117747|Sphingobacteriia	976|Bacteroidetes	I	Enoyl-CoA hydratase/isomerase	-	-	4.2.1.18	ko:K13766	ko00280,ko01100,map00280,map01100	M00036	R02085	RC02416	ko00000,ko00001,ko00002,ko01000	-	-	-	ECH_1
BYD3_k127_5369897_0	1191523.MROS_2744	6.069e-223	704.0	COG4799@1|root,COG4799@2|Bacteria	2|Bacteria	I	CoA carboxylase activity	-	-	2.1.3.15,6.4.1.3,6.4.1.4	ko:K01966,ko:K01969	ko00280,ko00630,ko00640,ko01100,ko01120,ko01130,ko01200,map00280,map00630,map00640,map01100,map01120,map01130,map01200	M00036,M00373,M00741	R01859,R04138	RC00097,RC00367,RC00609,RC00942	ko00000,ko00001,ko00002,ko01000	-	-	-	Carboxyl_trans
BYD3_k127_5371193_2	760192.Halhy_2351	1.956e-139	452.0	COG2152@1|root,COG2152@2|Bacteria,4NG7B@976|Bacteroidetes,1IQJ1@117747|Sphingobacteriia	976|Bacteroidetes	G	beta-1,4-mannooligosaccharide phosphorylase	-	-	3.2.1.197	ko:K21065	-	-	R11544	RC00049	ko00000,ko01000	-	-	-	Glyco_hydro_130
BYD3_k127_5371193_1	511995.CFPG_328	3.571e-200	637.0	COG0569@1|root,COG2985@1|root,COG0569@2|Bacteria,COG2985@2|Bacteria,4NEBW@976|Bacteroidetes,2FMDF@200643|Bacteroidia	976|Bacteroidetes	P	TrkA C-terminal domain protein	aspT_4	-	-	ko:K07085	-	-	-	-	ko00000	2.A.81	-	-	Asp-Al_Ex,TrkA_C
BYD3_k127_5371193_0	744872.Spica_2651	7.778e-255	805.0	COG1208@1|root,COG1208@2|Bacteria,2J5V0@203691|Spirochaetes	203691|Spirochaetes	JM	Domain of unknown function (DUF4954)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4954
BYD3_k127_5371193_3	1288963.ADIS_4680	1.047e-25	107.0	COG5646@1|root,COG5646@2|Bacteria,4NSDH@976|Bacteroidetes,47R0R@768503|Cytophagia	976|Bacteroidetes	S	Domain of unknown function (DU1801)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1801
BYD3_k127_539985_1	385682.AFSL01000024_gene2032	5.698e-208	668.0	COG1131@1|root,COG1131@2|Bacteria,4NHPD@976|Bacteroidetes,2FRF1@200643|Bacteroidia,3XIKU@558415|Marinilabiliaceae	976|Bacteroidetes	V	ABC-2 type transporter	-	-	-	-	-	-	-	-	-	-	-	-	ABC2_membrane,ABC_tran
BYD3_k127_539985_5	1168289.AJKI01000011_gene642	1.289e-50	190.0	29N3N@1|root,33PNI@2|Bacteria,4P1TW@976|Bacteroidetes,2G20D@200643|Bacteroidia,3XIQT@558415|Marinilabiliaceae	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_539985_0	468059.AUHA01000006_gene2880	2.719e-222	706.0	COG3158@1|root,COG3158@2|Bacteria,4NET9@976|Bacteroidetes,1IP14@117747|Sphingobacteriia	976|Bacteroidetes	P	Transport of potassium into the cell	kup	-	-	ko:K03549	-	-	-	-	ko00000,ko02000	2.A.72	-	-	K_trans
BYD3_k127_539985_3	1408473.JHXO01000004_gene123	1.407e-72	251.0	COG1385@1|root,COG1385@2|Bacteria,4NE2S@976|Bacteroidetes,2FKZG@200643|Bacteroidia	976|Bacteroidetes	J	Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit	rsmE	-	2.1.1.193	ko:K09761	-	-	-	-	ko00000,ko01000,ko03009	-	-	-	Methyltrans_RNA
BYD3_k127_539985_4	94122.Shewana3_0168	1.509e-70	267.0	COG2931@1|root,COG3637@1|root,COG4932@1|root,COG2931@2|Bacteria,COG3637@2|Bacteria,COG4932@2|Bacteria,1MU7T@1224|Proteobacteria,1RNK8@1236|Gammaproteobacteria,2QA62@267890|Shewanellaceae	1236|Gammaproteobacteria	MQ	Dystroglycan-type cadherin domain protein	-	-	-	ko:K11005	-	-	-	-	ko00000,ko02000,ko02042	1.C.11	-	-	Cadherin_3,Calx-beta,He_PIG,HemolysinCabind,VWA_2
BYD3_k127_539985_9	209285.XP_006694005.1	1.298e-07	65.0	2ECT2@1|root,2SSIP@2759|Eukaryota,3AJS6@33154|Opisthokonta,3PDEX@4751|Fungi,3QVNP@4890|Ascomycota,21A4U@147550|Sordariomycetes,3U55U@5139|Sordariales,3HC8Y@35718|Chaetomiaceae	4751|Fungi	O	GDSL-like Lipase/Acylhydrolase family	-	-	-	-	-	-	-	-	-	-	-	-	Lipase_GDSL_2
BYD3_k127_539985_6	880073.Calab_0825	3.09e-47	193.0	COG1404@1|root,COG3637@1|root,COG1404@2|Bacteria,COG3637@2|Bacteria,2NPDC@2323|unclassified Bacteria	2|Bacteria	O	Peptidase S8	-	-	3.4.21.66	ko:K08651	-	-	-	-	ko00000,ko01000,ko01002,ko03110	-	-	-	DUF3138,Peptidase_S8
BYD3_k127_539985_10	1484460.JSWG01000008_gene1892	4.738e-06	60.0	COG2132@1|root,COG2132@2|Bacteria,4NE3N@976|Bacteroidetes,1HZIA@117743|Flavobacteriia	976|Bacteroidetes	Q	Multicopper oxidase	-	-	-	-	-	-	-	-	-	-	-	-	Cu-oxidase,Cu-oxidase_2,Cu-oxidase_3
BYD3_k127_539985_2	929562.Emtol_4085	7.389e-170	545.0	COG1696@1|root,COG1696@2|Bacteria,4NFK5@976|Bacteroidetes,47KQS@768503|Cytophagia	976|Bacteroidetes	M	membrane protein involved in D-alanine export	-	-	-	-	-	-	-	-	-	-	-	-	MBOAT
BYD3_k127_539985_8	1150621.SMUL_0996	1.036e-07	64.0	COG0457@1|root,COG0457@2|Bacteria,1RIYN@1224|Proteobacteria,42T31@68525|delta/epsilon subdivisions	1224|Proteobacteria	S	SGNH hydrolase-like domain, acetyltransferase AlgX	-	-	-	-	-	-	-	-	-	-	-	-	ALGX
BYD3_k127_539985_7	1296416.JACB01000001_gene3175	9.495e-21	96.0	COG2311@1|root,COG2311@2|Bacteria,4NG01@976|Bacteroidetes,1HZVC@117743|Flavobacteriia,2YIWE@290174|Aquimarina	976|Bacteroidetes	S	Protein of unknown function (DUF418)	-	-	-	ko:K07148	-	-	-	-	ko00000	-	-	-	DUF418
BYD3_k127_5405527_6	929556.Solca_1872	1.885e-49	183.0	COG1912@1|root,COG1912@2|Bacteria,4NG9Y@976|Bacteroidetes,1IQEU@117747|Sphingobacteriia	976|Bacteroidetes	S	S-adenosyl-l-methionine hydroxide adenosyltransferase	fjo14	-	-	-	-	-	-	-	-	-	-	-	SAM_adeno_trans
BYD3_k127_5405527_0	226186.BT_4350	1.197e-108	357.0	COG1694@1|root,COG3956@2|Bacteria,4NEA3@976|Bacteroidetes,2FKYP@200643|Bacteroidia,4AMDU@815|Bacteroidaceae	976|Bacteroidetes	S	Psort location Cytoplasmic, score 8.96	mazG	-	3.6.1.66	ko:K02428	ko00230,map00230	-	R00426,R00720,R01855,R02100,R02720,R03531	RC00002	ko00000,ko00001,ko01000	-	-	-	MazG
BYD3_k127_5405527_3	925409.KI911562_gene826	3.735e-76	263.0	COG0388@1|root,COG0388@2|Bacteria,4NE37@976|Bacteroidetes,1INZJ@117747|Sphingobacteriia	976|Bacteroidetes	S	Nitrilase cyanide hydratase and apolipoprotein N-acyltransferase	yafV	-	3.5.1.3	ko:K13566	ko00250,map00250	-	R00269,R00348	RC00010	ko00000,ko00001,ko01000	-	-	-	CN_hydrolase
BYD3_k127_5405527_4	869213.JCM21142_83257	2.479e-51	187.0	COG1047@1|root,COG1047@2|Bacteria,4NM29@976|Bacteroidetes,47PG1@768503|Cytophagia	976|Bacteroidetes	O	Peptidyl-prolyl cis-trans isomerase	slyD	-	5.2.1.8	ko:K01802,ko:K03775	-	-	-	-	ko00000,ko01000,ko03110	-	-	-	FKBP_C
BYD3_k127_5405527_7	388413.ALPR1_05220	3.41e-25	113.0	COG3637@1|root,COG3637@2|Bacteria,4NVY6@976|Bacteroidetes,47XQZ@768503|Cytophagia	976|Bacteroidetes	M	Outer membrane protein beta-barrel domain	-	-	-	-	-	-	-	-	-	-	-	-	OMP_b-brl_2
BYD3_k127_5405527_5	1123277.KB893173_gene1693	6.245e-50	184.0	COG2135@1|root,COG2135@2|Bacteria,4NI3T@976|Bacteroidetes,47XPZ@768503|Cytophagia	976|Bacteroidetes	S	Belongs to the SOS response-associated peptidase family	yoqW	-	-	-	-	-	-	-	-	-	-	-	SRAP
BYD3_k127_5405527_2	886379.AEWI01000039_gene2834	6.192e-78	277.0	COG5000@1|root,COG5000@2|Bacteria,4NEWF@976|Bacteroidetes,2FP7E@200643|Bacteroidia,3XIUP@558415|Marinilabiliaceae	976|Bacteroidetes	T	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase	-	-	-	-	-	-	-	-	-	-	-	-	HATPase_c
BYD3_k127_5405527_1	1168034.FH5T_07580	6.21e-86	291.0	COG2204@1|root,COG2204@2|Bacteria,4NE89@976|Bacteroidetes,2FMRV@200643|Bacteroidia	976|Bacteroidetes	T	COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains	-	-	-	-	-	-	-	-	-	-	-	-	HTH_8,Response_reg,Sigma54_activat
BYD3_k127_5447488_5	471854.Dfer_2050	5.822e-56	220.0	COG2831@1|root,COG2931@1|root,COG2831@2|Bacteria,COG2931@2|Bacteria,4NKIR@976|Bacteroidetes,47S7V@768503|Cytophagia	976|Bacteroidetes	Q	SMART Integrin alpha beta-propellor repeat protein	-	-	-	-	-	-	-	-	-	-	-	-	CHU_C,FG-GAP,HYR,VCBS
BYD3_k127_5447488_6	1492737.FEM08_23920	7.928e-15	89.0	COG3210@1|root,COG3210@2|Bacteria	2|Bacteria	U	domain, Protein	-	-	4.2.2.20,4.2.2.21	ko:K08961	-	-	-	-	ko00000,ko01000	-	-	-	CHU_C,Calx-beta,Lyase_8,Lyase_catalyt,PA14,SdrD_B
BYD3_k127_5447488_0	1123248.KB893326_gene1334	2.133e-275	852.0	COG0673@1|root,COG0673@2|Bacteria,4NEN5@976|Bacteroidetes,1IRBM@117747|Sphingobacteriia	976|Bacteroidetes	S	Oxidoreductase	-	-	-	-	-	-	-	-	-	-	-	-	GFO_IDH_MocA
BYD3_k127_5447488_3	1123248.KB893326_gene1335	2.959e-95	319.0	COG3291@1|root,COG3291@2|Bacteria	2|Bacteria	S	metallopeptidase activity	-	-	-	-	-	-	-	-	-	-	-	-	CHU_C,DUF1080,DUF285,GSDH,PKD,ThuA
BYD3_k127_5447488_1	1123248.KB893386_gene1948	5.215e-202	638.0	COG0673@1|root,COG0673@2|Bacteria,4NF4Q@976|Bacteroidetes	976|Bacteroidetes	S	Oxidoreductase domain protein	-	-	-	-	-	-	-	-	-	-	-	-	GFO_IDH_MocA
BYD3_k127_5447488_2	742817.HMPREF9449_02135	2.103e-149	485.0	COG1322@1|root,COG1322@2|Bacteria,4NE04@976|Bacteroidetes,2FQ56@200643|Bacteroidia,22XDQ@171551|Porphyromonadaceae	976|Bacteroidetes	S	RmuC family	rmuC	-	-	ko:K09760	-	-	-	-	ko00000	-	-	-	RmuC
BYD3_k127_5447488_4	1150600.ADIARSV_2076	2.671e-79	268.0	COG0279@1|root,COG0279@2|Bacteria,4NJX7@976|Bacteroidetes,1IRJQ@117747|Sphingobacteriia	976|Bacteroidetes	G	Catalyzes the isomerization of sedoheptulose 7-phosphate in D-glycero-D-manno-heptose 7-phosphate	gmhA	-	5.3.1.28	ko:K03271	ko00540,ko01100,map00540,map01100	M00064	R05645,R09768,R09769	RC00434	ko00000,ko00001,ko00002,ko01000,ko01005	-	-	-	SIS_2
BYD3_k127_5447488_7	869213.JCM21142_31099	8.892e-15	77.0	COG2067@1|root,COG2067@2|Bacteria	2|Bacteria	I	long-chain fatty acid transporting porin activity	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_5483138_0	1237149.C900_05268	9.554e-200	654.0	COG0419@1|root,COG0419@2|Bacteria,4NGQP@976|Bacteroidetes,47MNH@768503|Cytophagia	976|Bacteroidetes	L	chitinase	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_5519335_5	1086011.HJ01_00619	3.453e-11	64.0	COG1595@1|root,COG1595@2|Bacteria,4NQCH@976|Bacteroidetes,1I1A4@117743|Flavobacteriia,2NV9Y@237|Flavobacterium	976|Bacteroidetes	K	Belongs to the sigma-70 factor family. ECF subfamily	-	-	-	ko:K03088	-	-	-	-	ko00000,ko03021	-	-	-	Sigma70_r2,Sigma70_r4_2
BYD3_k127_5519335_3	869213.JCM21142_1689	1.643e-108	355.0	COG1136@1|root,COG1136@2|Bacteria,4NE5N@976|Bacteroidetes,47NU9@768503|Cytophagia	976|Bacteroidetes	V	ATPases associated with a variety of cellular activities	-	-	-	ko:K02003	-	M00258	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	ABC_tran
BYD3_k127_5519335_2	1408473.JHXO01000010_gene3697	8.598e-125	411.0	COG0577@1|root,COG0577@2|Bacteria,4NEBD@976|Bacteroidetes,2FNZ2@200643|Bacteroidia	976|Bacteroidetes	V	Efflux ABC transporter, permease protein	-	-	-	ko:K02004	-	M00258	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	FtsX,MacB_PCD
BYD3_k127_5519335_0	1408473.JHXO01000010_gene3698	2.347e-149	483.0	COG0577@1|root,COG0577@2|Bacteria,4NFUG@976|Bacteroidetes,2FM5B@200643|Bacteroidia	976|Bacteroidetes	V	Efflux ABC transporter, permease protein	macB_3	-	-	ko:K02004	-	M00258	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	FtsX,MacB_PCD
BYD3_k127_5519335_1	1408473.JHXO01000010_gene3699	5.194e-142	459.0	COG0845@1|root,COG0845@2|Bacteria,4NFT4@976|Bacteroidetes,2FPA0@200643|Bacteroidia	976|Bacteroidetes	M	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family	-	-	-	ko:K02005	-	-	-	-	ko00000	-	-	-	Biotin_lipoyl_2,HlyD_3,HlyD_D23,OEP
BYD3_k127_5519335_4	926559.JoomaDRAFT_3090	1.053e-65	240.0	COG2067@1|root,COG2067@2|Bacteria,4NF5E@976|Bacteroidetes,1IIZ5@117743|Flavobacteriia	976|Bacteroidetes	I	long-chain fatty acid transport protein	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_5519335_6	1453505.JASY01000002_gene2949	3.738e-07	56.0	28J4T@1|root,2Z90P@2|Bacteria,4NHUC@976|Bacteroidetes,1HZE4@117743|Flavobacteriia,2NUFS@237|Flavobacterium	976|Bacteroidetes	S	Domain of unknown function (DUF4270)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4270
BYD3_k127_5607872_2	929562.Emtol_2704	2.049e-113	370.0	COG1554@1|root,COG1554@2|Bacteria,4NEWW@976|Bacteroidetes,47JFT@768503|Cytophagia	976|Bacteroidetes	G	Glycosyl hydrolase family 65, N-terminal domain	-	-	3.2.1.51	ko:K15923	ko00511,map00511	-	-	-	ko00000,ko00001,ko01000	-	GH95	-	Glyco_hyd_65N_2
BYD3_k127_5607872_1	926551.KB900715_gene2226	1.78e-116	391.0	COG1070@1|root,COG1070@2|Bacteria,4NIJC@976|Bacteroidetes	976|Bacteroidetes	G	Carbohydrate kinase, FGGY family protein	rhaB	GO:0005975,GO:0005996,GO:0008150,GO:0008152,GO:0009056,GO:0016052,GO:0019299,GO:0019301,GO:0019318,GO:0019320,GO:0044238,GO:0044281,GO:0044282,GO:0046365,GO:0071704,GO:1901575	2.7.1.5,2.7.1.51	ko:K00848,ko:K00879	ko00040,ko00051,ko01120,map00040,map00051,map01120	-	R01902,R03014,R03241	RC00002,RC00017	ko00000,ko00001,ko01000	-	-	-	FGGY_C,FGGY_N
BYD3_k127_5607872_3	926562.Oweho_2064	3.396e-86	291.0	COG0745@1|root,COG0745@2|Bacteria,4NE77@976|Bacteroidetes,1IMIZ@117743|Flavobacteriia	976|Bacteroidetes	T	transcriptional regulator	-	-	-	ko:K07665	ko02020,map02020	M00452,M00745	-	-	ko00000,ko00001,ko00002,ko01504,ko02022	-	-	-	Response_reg,Trans_reg_C
BYD3_k127_5607872_0	926562.Oweho_2065	4.218e-121	404.0	COG0642@1|root,COG3850@1|root,COG2205@2|Bacteria,COG3850@2|Bacteria,4NEIS@976|Bacteroidetes,1HXGB@117743|Flavobacteriia,2PBKD@246874|Cryomorphaceae	976|Bacteroidetes	T	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase	arlS_1	-	-	-	-	-	-	-	-	-	-	-	HAMP,HATPase_c,HisKA
BYD3_k127_5607872_4	335543.Sfum_1623	2.81e-68	242.0	COG3118@1|root,COG3118@2|Bacteria,1PQ8G@1224|Proteobacteria	1224|Proteobacteria	O	ASPIC and UnbV	-	-	-	-	-	-	-	-	-	-	-	-	UnbV_ASPIC,VCBS
BYD3_k127_5624660_2	1123371.ATXH01000009_gene1077	5.075e-138	447.0	COG0438@1|root,COG0438@2|Bacteria,2GHNP@200940|Thermodesulfobacteria	200940|Thermodesulfobacteria	M	Glycosyltransferase Family 4	-	-	-	-	-	-	-	-	-	-	-	-	Glyco_transf_4,Glycos_transf_1
BYD3_k127_5624660_1	929556.Solca_1091	1.028e-233	743.0	COG3408@1|root,COG3408@2|Bacteria,4NK6K@976|Bacteroidetes,1IUDA@117747|Sphingobacteriia	976|Bacteroidetes	G	N-terminal domain of (some) glycogen debranching enzymes	-	-	-	-	-	-	-	-	-	-	-	-	GDE_C,GDE_N_bis
BYD3_k127_5624660_7	1123057.P872_19775	6.15e-18	87.0	2DP1T@1|root,3306B@2|Bacteria,4NVIV@976|Bacteroidetes,47S6F@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_5624660_3	1185876.BN8_00966	5.64e-102	338.0	COG4242@1|root,COG4242@2|Bacteria,4NI55@976|Bacteroidetes,47PST@768503|Cytophagia	976|Bacteroidetes	PQ	Belongs to the peptidase S51 family	cphB	-	3.4.15.6	ko:K13282	-	-	R09722	RC00064,RC00141	ko00000,ko01000,ko01002	-	-	-	Peptidase_S51
BYD3_k127_5624660_0	1185876.BN8_00961	3.209e-296	934.0	COG0189@1|root,COG0769@1|root,COG0189@2|Bacteria,COG0769@2|Bacteria,4NEDY@976|Bacteroidetes,47MQF@768503|Cytophagia	976|Bacteroidetes	HJM	Belongs to the MurCDEF family	cphA	-	6.3.2.29,6.3.2.30	ko:K03802	-	-	-	-	ko00000,ko01000	-	-	-	Mur_ligase_C,Mur_ligase_M,RimK
BYD3_k127_5624660_4	1408473.JHXO01000007_gene752	1.233e-66	249.0	COG0642@1|root,COG5002@1|root,COG2205@2|Bacteria,COG5002@2|Bacteria,4NGZ0@976|Bacteroidetes	976|Bacteroidetes	T	Response regulator receiver domain	-	-	-	-	-	-	-	-	-	-	-	-	HATPase_c,HisKA,PAS,PAS_3,PAS_9
BYD3_k127_5624660_6	111780.Sta7437_3706	5.822e-27	127.0	COG0745@1|root,COG2199@1|root,COG2203@1|root,COG0745@2|Bacteria,COG2203@2|Bacteria,COG3706@2|Bacteria,1G2A0@1117|Cyanobacteria,3VMDE@52604|Pleurocapsales	1117|Cyanobacteria	T	diguanylate cyclase	-	-	-	-	-	-	-	-	-	-	-	-	EAL,GAF,GAF_2,GGDEF,Response_reg
BYD3_k127_5624660_5	306281.AJLK01000156_gene4701	1.978e-39	148.0	COG0745@1|root,COG0745@2|Bacteria,1G51F@1117|Cyanobacteria,1JJDJ@1189|Stigonemataceae	1117|Cyanobacteria	KT	cheY-homologous receiver domain	-	-	-	ko:K02485	-	-	-	-	ko00000,ko02022	-	-	-	Response_reg
BYD3_k127_5643166_1	143224.JQMD01000002_gene686	1.816e-129	441.0	COG0457@1|root,COG0457@2|Bacteria,4NIBU@976|Bacteroidetes,1HZ35@117743|Flavobacteriia	143224.JQMD01000002_gene686|-	S	Domain of unknown function (DUF5107)	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_5643166_2	382464.ABSI01000017_gene59	1.228e-105	357.0	COG4225@1|root,COG4225@2|Bacteria,46UYE@74201|Verrucomicrobia,2IVRC@203494|Verrucomicrobiae	203494|Verrucomicrobiae	M	Glycosyl Hydrolase Family 88	-	-	-	-	-	-	-	-	-	-	-	-	Glyco_hydro_88
BYD3_k127_5643166_0	1347369.CCAD010000081_gene2579	3.99e-197	642.0	COG0457@1|root,COG0457@2|Bacteria,1TPP8@1239|Firmicutes,4HCXY@91061|Bacilli,1ZE7M@1386|Bacillus	91061|Bacilli	S	Domain of unknown function (DUF5107)	-	-	-	-	-	-	-	-	-	-	-	-	DUF5107,TPR_11,TPR_16,TPR_2,TPR_6,TPR_8
BYD3_k127_5673703_0	1408473.JHXO01000010_gene3763	2.265e-199	653.0	COG1520@1|root,COG1520@2|Bacteria,4NHQ3@976|Bacteroidetes,2FQ6V@200643|Bacteroidia	976|Bacteroidetes	S	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane	-	-	-	-	-	-	-	-	-	-	-	-	DUF3352
BYD3_k127_568081_0	1166018.FAES_4424	1.632e-240	752.0	COG3533@1|root,COG3533@2|Bacteria,4NFW3@976|Bacteroidetes,47M6F@768503|Cytophagia	976|Bacteroidetes	S	Beta-L-arabinofuranosidase, GH127	-	-	-	ko:K09955	-	-	-	-	ko00000	-	-	-	F5_F8_type_C,Glyco_hydro_127
BYD3_k127_568081_1	153721.MYP_3676	7.709e-16	90.0	COG0484@1|root,COG0484@2|Bacteria,4PBHX@976|Bacteroidetes,47VX4@768503|Cytophagia	976|Bacteroidetes	O	DnaJ molecular chaperone homology domain	-	-	-	-	-	-	-	-	-	-	-	-	DnaJ
BYD3_k127_5824427_6	313606.M23134_08413	3.812e-64	251.0	COG3291@1|root,COG3405@1|root,COG4625@1|root,COG3291@2|Bacteria,COG3405@2|Bacteria,COG4625@2|Bacteria,4NJU9@976|Bacteroidetes,47NEJ@768503|Cytophagia	976|Bacteroidetes	Q	cell adhesion involved in biofilm formation	-	-	-	-	-	-	-	-	-	-	-	-	Big_5,PKD
BYD3_k127_5824427_1	1304284.L21TH_1914	7.551e-152	490.0	COG0426@1|root,COG0426@2|Bacteria,1TQE9@1239|Firmicutes,249CU@186801|Clostridia,36E70@31979|Clostridiaceae	186801|Clostridia	C	flavodoxin nitric oxide synthase	fprA2	GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0005506,GO:0006091,GO:0008150,GO:0008152,GO:0009055,GO:0009987,GO:0010181,GO:0016491,GO:0016651,GO:0016661,GO:0016662,GO:0016966,GO:0022900,GO:0032553,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0044237,GO:0046872,GO:0046914,GO:0048037,GO:0050662,GO:0050664,GO:0055114,GO:0072593,GO:0097159,GO:0097367,GO:1901265,GO:1901363	1.6.3.4	ko:K22405	-	-	-	-	ko00000,ko01000	-	-	-	Flavodoxin_1,Lactamase_B,Pyr_redox_2
BYD3_k127_5824427_10	1167006.UWK_01592	7.216e-18	86.0	2E3BY@1|root,32YBB@2|Bacteria,1NDZS@1224|Proteobacteria,42X6C@68525|delta/epsilon subdivisions,2WSF7@28221|Deltaproteobacteria,2MPAM@213118|Desulfobacterales	28221|Deltaproteobacteria	S	Domain of unknown function (DUF4492)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4492
BYD3_k127_5824427_0	1408473.JHXO01000006_gene1193	1.379e-217	686.0	COG1271@1|root,COG1271@2|Bacteria,4NG7U@976|Bacteroidetes,2FMV6@200643|Bacteroidia	976|Bacteroidetes	C	oxidase, subunit	cydA	-	1.10.3.14	ko:K00425	ko00190,ko01100,ko02020,map00190,map01100,map02020	M00153	R11325	RC00061	ko00000,ko00001,ko00002,ko01000	3.D.4.3	-	-	Cyt_bd_oxida_I
BYD3_k127_5824427_2	927658.AJUM01000037_gene2316	1.365e-145	470.0	COG1294@1|root,COG1294@2|Bacteria,4NHZU@976|Bacteroidetes,2FMIN@200643|Bacteroidia,3XJDS@558415|Marinilabiliaceae	976|Bacteroidetes	C	Cytochrome bd terminal oxidase subunit II	cydB	-	1.10.3.14	ko:K00426	ko00190,ko01100,ko02020,map00190,map01100,map02020	M00153	R11325	RC00061	ko00000,ko00001,ko00002,ko01000	3.D.4.3	-	-	Cyt_bd_oxida_II
BYD3_k127_5824427_8	880071.Fleli_2045	1.234e-46	178.0	COG1183@1|root,COG1183@2|Bacteria,4NNUZ@976|Bacteroidetes,47PCF@768503|Cytophagia	976|Bacteroidetes	I	Belongs to the CDP-alcohol phosphatidyltransferase class-I family	pssA	-	2.7.8.8	ko:K17103	ko00260,ko00564,ko01100,ko01110,map00260,map00564,map01100,map01110	M00093	R01800	RC00002,RC00017,RC02795	ko00000,ko00001,ko00002,ko01000	-	-	-	CDP-OH_P_transf
BYD3_k127_5824427_7	886379.AEWI01000046_gene3114	6.031e-53	189.0	COG0241@1|root,COG0241@2|Bacteria,4PKR5@976|Bacteroidetes,2G0BM@200643|Bacteroidia,3XJZB@558415|Marinilabiliaceae	976|Bacteroidetes	E	D,D-heptose 1,7-bisphosphate phosphatase	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_5824427_5	1121904.ARBP01000001_gene5996	1.643e-83	289.0	COG3823@1|root,COG3823@2|Bacteria,4NF2M@976|Bacteroidetes	976|Bacteroidetes	O	Glutamine cyclotransferase	-	-	2.3.2.5	ko:K00683	-	-	-	-	ko00000,ko01000	-	-	-	Glu_cyclase_2
BYD3_k127_5824427_3	869213.JCM21142_104185	3.763e-128	413.0	COG1192@1|root,COG1192@2|Bacteria,4NFEX@976|Bacteroidetes,47JM3@768503|Cytophagia	976|Bacteroidetes	D	PFAM CobQ CobB MinD ParA nucleotide binding domain	soj	-	-	ko:K03496	-	-	-	-	ko00000,ko03036,ko04812	-	-	-	AAA_31
BYD3_k127_5824427_4	927658.AJUM01000037_gene2193	1.77e-99	333.0	COG1475@1|root,COG1475@2|Bacteria,4NFZ9@976|Bacteroidetes,2FP81@200643|Bacteroidia,3XINV@558415|Marinilabiliaceae	976|Bacteroidetes	K	ParB-like nuclease domain	parB	-	-	ko:K03497	-	-	-	-	ko00000,ko03000,ko03036,ko04812	-	-	-	ParBc
BYD3_k127_5824427_9	927658.AJUM01000037_gene2194	7.442e-35	141.0	28PR3@1|root,2ZCD0@2|Bacteria,4NMAF@976|Bacteroidetes,2FTY0@200643|Bacteroidia,3XK1I@558415|Marinilabiliaceae	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_5909162_4	886379.AEWI01000029_gene221	1.538e-19	89.0	COG1091@1|root,COG1091@2|Bacteria,4NE3K@976|Bacteroidetes,2FN7H@200643|Bacteroidia,3XIS7@558415|Marinilabiliaceae	976|Bacteroidetes	M	RmlD substrate binding domain	rfbD	-	1.1.1.133	ko:K00067	ko00521,ko00523,ko01130,map00521,map00523,map01130	M00793	R02777	RC00182	ko00000,ko00001,ko00002,ko01000	-	-	-	RmlD_sub_bind
BYD3_k127_5909162_1	1349822.NSB1T_07235	8.809e-225	710.0	COG1109@1|root,COG1109@2|Bacteria,4NFU7@976|Bacteroidetes,2FM0A@200643|Bacteroidia,22WB1@171551|Porphyromonadaceae	976|Bacteroidetes	G	Phosphoglucomutase	pgcA	-	5.4.2.2	ko:K01835	ko00010,ko00030,ko00052,ko00230,ko00500,ko00520,ko00521,ko01100,ko01110,ko01120,ko01130,map00010,map00030,map00052,map00230,map00500,map00520,map00521,map01100,map01110,map01120,map01130	M00549	R00959,R01057,R08639	RC00408	ko00000,ko00001,ko00002,ko01000	-	-	-	PGM_PMM_I,PGM_PMM_II,PGM_PMM_III,PGM_PMM_IV
BYD3_k127_5909162_3	1121422.AUMW01000013_gene1433	1.985e-76	257.0	COG0432@1|root,COG0432@2|Bacteria,1V201@1239|Firmicutes,24FTY@186801|Clostridia,261SP@186807|Peptococcaceae	186801|Clostridia	J	Uncharacterised protein family UPF0047	-	-	-	-	-	-	-	-	-	-	-	-	UPF0047
BYD3_k127_5909162_0	1408473.JHXO01000008_gene2896	0.0	1087.0	COG1166@1|root,COG1166@2|Bacteria,4PKX0@976|Bacteroidetes,2FMN2@200643|Bacteroidia	976|Bacteroidetes	H	Catalyzes the biosynthesis of agmatine from arginine	speA	-	4.1.1.19	ko:K01585	ko00330,ko01100,map00330,map01100	M00133	R00566	RC00299	ko00000,ko00001,ko00002,ko01000	-	-	-	Orn_Arg_deC_N
BYD3_k127_5909162_2	1408473.JHXO01000004_gene38	2.041e-156	507.0	COG1387@1|root,COG1387@2|Bacteria,4NMBC@976|Bacteroidetes,2FNU7@200643|Bacteroidia	976|Bacteroidetes	E	Domain of Unknown Function (DUF1080)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1080
BYD3_k127_5909976_0	1408473.JHXO01000010_gene3611	2.825e-193	658.0	COG3291@1|root,COG3291@2|Bacteria,4PHVT@976|Bacteroidetes,2FUHU@200643|Bacteroidia	976|Bacteroidetes	S	Repeats in polycystic kidney disease 1 (PKD1) and other proteins	-	-	-	-	-	-	-	-	-	-	-	-	CHU_C,PKD
BYD3_k127_5909976_1	1168289.AJKI01000031_gene1056	9.941e-69	244.0	COG4772@1|root,COG4772@2|Bacteria,4NG13@976|Bacteroidetes,2G23F@200643|Bacteroidia,3XJE6@558415|Marinilabiliaceae	976|Bacteroidetes	P	Type IX secretion system membrane protein PorP/SprF	-	-	-	-	-	-	-	-	-	-	-	-	PorP_SprF
BYD3_k127_5909976_2	1158294.JOMI01000004_gene3305	3.121e-21	101.0	COG2825@1|root,COG2825@2|Bacteria,4NQGG@976|Bacteroidetes,2FPTR@200643|Bacteroidia	976|Bacteroidetes	M	membrane	-	-	-	ko:K06142	-	-	-	-	ko00000	-	-	-	OmpH
BYD3_k127_5951190_3	268407.PWYN_04725	2.692e-97	324.0	COG1882@1|root,COG1882@2|Bacteria,1TPTF@1239|Firmicutes,4HATB@91061|Bacilli,26WMN@186822|Paenibacillaceae	91061|Bacilli	C	Pyruvate formate lyase-like	pflD	-	2.3.1.54,4.3.99.4	ko:K00656,ko:K20038	ko00620,ko00640,ko00650,ko01100,ko01120,map00620,map00640,map00650,map01100,map01120	-	R00212,R06987	RC00004,RC01181,RC02742,RC02833	ko00000,ko00001,ko01000	-	-	-	Gly_radical,PFL-like
BYD3_k127_5951190_0	1122931.AUAE01000031_gene2891	8.797e-146	479.0	COG5520@1|root,COG5520@2|Bacteria,4NF4C@976|Bacteroidetes,2FNPT@200643|Bacteroidia,22W5A@171551|Porphyromonadaceae	976|Bacteroidetes	G	Belongs to the glycosyl hydrolase 30 family	-	-	3.2.1.45	ko:K01201	ko00511,ko00600,ko01100,ko04142,map00511,map00600,map01100,map04142	-	R01498	RC00059,RC00451	ko00000,ko00001,ko01000	-	GH30	-	Glyco_hydro_30,Glyco_hydro_30C
BYD3_k127_5951190_2	880073.Calab_0992	3.044e-99	332.0	COG2006@1|root,COG2006@2|Bacteria,2NQF7@2323|unclassified Bacteria	2|Bacteria	S	Domain of unknown function (DUF362)	-	-	-	-	-	-	-	-	-	-	-	-	DUF362
BYD3_k127_5951190_5	880073.Calab_0991	3.718e-41	162.0	2CK1R@1|root,31E53@2|Bacteria,2NR8M@2323|unclassified Bacteria	2|Bacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_5951190_1	926549.KI421517_gene3691	5.246e-145	467.0	COG0346@1|root,COG0346@2|Bacteria,4NDVG@976|Bacteroidetes,47MTQ@768503|Cytophagia	976|Bacteroidetes	E	PFAM Glyoxalase bleomycin resistance protein dioxygenase	-	-	-	-	-	-	-	-	-	-	-	-	Glyoxalase,Glyoxalase_4
BYD3_k127_5951190_4	385682.AFSL01000053_gene481	3.02e-74	258.0	COG0300@1|root,COG0300@2|Bacteria,4NEMK@976|Bacteroidetes,2G0DY@200643|Bacteroidia,3XIKE@558415|Marinilabiliaceae	976|Bacteroidetes	S	NAD(P)H-binding	-	-	-	-	-	-	-	-	-	-	-	-	adh_short
BYD3_k127_5990884_4	470145.BACCOP_03106	7.977e-129	434.0	COG4206@1|root,COG4206@2|Bacteria,4P258@976|Bacteroidetes,2FW53@200643|Bacteroidia,4AWE5@815|Bacteroidaceae	976|Bacteroidetes	P	TonB-linked outer membrane protein, SusC RagA family	-	-	-	-	-	-	-	-	-	-	-	-	CarbopepD_reg_2,Plug,TonB_dep_Rec
BYD3_k127_5990884_8	886379.AEWI01000020_gene1380	6.722e-70	249.0	COG3712@1|root,COG3712@2|Bacteria,4NMXF@976|Bacteroidetes,2FR5V@200643|Bacteroidia,3XK5C@558415|Marinilabiliaceae	976|Bacteroidetes	PT	FecR protein	-	-	-	-	-	-	-	-	-	-	-	-	DUF4974,FecR
BYD3_k127_5990884_12	143224.JQMD01000002_gene363	2.184e-26	117.0	COG1595@1|root,COG1595@2|Bacteria,4NRYV@976|Bacteroidetes,1I2Z3@117743|Flavobacteriia	976|Bacteroidetes	K	Belongs to the sigma-70 factor family. ECF subfamily	-	-	-	ko:K03088	-	-	-	-	ko00000,ko03021	-	-	-	Sigma70_r2,Sigma70_r4_2
BYD3_k127_5990884_11	926562.Oweho_2757	1.369e-26	120.0	COG1196@1|root,COG1196@2|Bacteria,4NTB2@976|Bacteroidetes	976|Bacteroidetes	D	nuclear chromosome segregation	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_5990884_2	1349822.NSB1T_12740	1.789e-275	854.0	COG0488@1|root,COG0488@2|Bacteria,4NEHU@976|Bacteroidetes,2FMW7@200643|Bacteroidia,22VV9@171551|Porphyromonadaceae	976|Bacteroidetes	S	ABC transporter, ATP-binding protein	-	-	-	-	-	-	-	-	-	-	-	-	ABC_tran,ABC_tran_Xtn
BYD3_k127_5990884_10	886379.AEWI01000013_gene2061	1.089e-38	145.0	COG0776@1|root,COG0776@2|Bacteria,4NSK6@976|Bacteroidetes,2FTWW@200643|Bacteroidia,3XK95@558415|Marinilabiliaceae	976|Bacteroidetes	L	bacterial (prokaryotic) histone like domain	hupB	-	-	ko:K03530	-	-	-	-	ko00000,ko03032,ko03036,ko03400	-	-	-	Bac_DNA_binding
BYD3_k127_5990884_7	1408473.JHXO01000011_gene3075	6.782e-75	258.0	COG0566@1|root,COG0566@2|Bacteria,4NFH3@976|Bacteroidetes,2FSSX@200643|Bacteroidia	976|Bacteroidetes	J	Catalyzes the 2'-O methylation of guanosine at position 18 in tRNA	trmH	-	2.1.1.34	ko:K00556	-	-	-	-	ko00000,ko01000,ko03016	-	-	-	SpoU_methylase
BYD3_k127_5990884_6	869213.JCM21142_72590	3.727e-96	319.0	COG3279@1|root,COG3279@2|Bacteria,4NHUZ@976|Bacteroidetes,47PSG@768503|Cytophagia	976|Bacteroidetes	KT	Response regulator of the LytR AlgR family	-	-	-	-	-	-	-	-	-	-	-	-	LytTR,Response_reg
BYD3_k127_5990884_9	869213.JCM21142_83255	2.984e-50	188.0	28P29@1|root,2ZBYD@2|Bacteria,4NMK6@976|Bacteroidetes	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_5990884_1	886379.AEWI01000021_gene1594	4.571e-309	960.0	COG0326@1|root,COG0326@2|Bacteria,4NDXZ@976|Bacteroidetes,2FMED@200643|Bacteroidia,3XIP6@558415|Marinilabiliaceae	976|Bacteroidetes	O	Hsp90 protein	htpG	-	-	ko:K04079	ko04141,ko04151,ko04217,ko04612,ko04621,ko04626,ko04657,ko04659,ko04914,ko04915,ko05200,ko05215,ko05418,map04141,map04151,map04217,map04612,map04621,map04626,map04657,map04659,map04914,map04915,map05200,map05215,map05418	-	-	-	ko00000,ko00001,ko01009,ko03029,ko03051,ko03110,ko04131,ko04147	-	-	-	HATPase_c_3,HSP90
BYD3_k127_5990884_0	694427.Palpr_2916	0.0	1027.0	COG2382@1|root,COG2382@2|Bacteria,4NF50@976|Bacteroidetes,2FMIP@200643|Bacteroidia,22ZHA@171551|Porphyromonadaceae	976|Bacteroidetes	P	Putative esterase	-	-	-	ko:K07214	-	-	-	-	ko00000	-	-	-	Esterase,SASA
BYD3_k127_5990884_3	1408473.JHXO01000005_gene1544	1.73e-267	831.0	COG3507@1|root,COG3507@2|Bacteria,4NEVJ@976|Bacteroidetes,2G2PB@200643|Bacteroidia	976|Bacteroidetes	G	Belongs to the glycosyl hydrolase 43 family	-	-	-	-	-	-	-	-	-	-	-	-	CBM9_1,Glyco_hydro_43
BYD3_k127_5990884_5	1408473.JHXO01000005_gene1542	2.692e-106	351.0	COG3507@1|root,COG3507@2|Bacteria,4NIFE@976|Bacteroidetes,2FNN0@200643|Bacteroidia	976|Bacteroidetes	G	Belongs to the glycosyl hydrolase 43 family	-	-	-	-	-	-	-	-	-	-	-	-	CBM_6,Glyco_hydro_43,Glyco_hydro_8
BYD3_k127_5994258_4	324925.Ppha_1026	3.375e-36	139.0	COG0388@1|root,COG0388@2|Bacteria,1FDPJ@1090|Chlorobi	1090|Chlorobi	S	PFAM Nitrilase cyanide hydratase and apolipoprotein N-acyltransferase	-	-	3.5.1.53	ko:K12251	ko00330,ko01100,map00330,map01100	-	R01152	RC00096	ko00000,ko00001,ko01000	-	-	-	CN_hydrolase
BYD3_k127_5994258_3	436114.SYO3AOP1_0240	1.772e-113	374.0	COG1052@1|root,COG1052@2|Bacteria	2|Bacteria	CH	NAD binding	hprA	GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464	1.1.1.29,1.1.1.399,1.1.1.95	ko:K00018,ko:K00058	ko00260,ko00630,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00260,map00630,map00680,map01100,map01110,map01120,map01130,map01200,map01230	M00020,M00346	R00717,R01388,R01513	RC00031,RC00042	ko00000,ko00001,ko00002,ko01000,ko04147	-	-	-	2-Hacid_dh,2-Hacid_dh_C
BYD3_k127_5994258_1	926562.Oweho_1666	1.962e-185	587.0	COG0019@1|root,COG0019@2|Bacteria,4NE7X@976|Bacteroidetes,1HXB7@117743|Flavobacteriia,2PAYQ@246874|Cryomorphaceae	976|Bacteroidetes	E	Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine	lysA	-	4.1.1.20	ko:K01586	ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00300,map01100,map01110,map01120,map01130,map01230	M00016,M00525,M00526,M00527	R00451	RC00299	ko00000,ko00001,ko00002,ko01000	-	-	-	Orn_Arg_deC_N,Orn_DAP_Arg_deC
BYD3_k127_5994258_2	1408473.JHXO01000008_gene2784	4.545e-170	554.0	COG0706@1|root,COG0706@2|Bacteria,4NESJ@976|Bacteroidetes,2FN3A@200643|Bacteroidia	976|Bacteroidetes	U	Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins	yidC	-	-	ko:K03217	ko02024,ko03060,ko03070,map02024,map03060,map03070	M00335	-	-	ko00000,ko00001,ko00002,ko02044,ko03029	2.A.9	-	-	60KD_IMP,YidC_periplas
BYD3_k127_5994258_0	1185876.BN8_03050	1.237e-211	666.0	COG0504@1|root,COG0504@2|Bacteria,4NEWT@976|Bacteroidetes,47KXM@768503|Cytophagia	976|Bacteroidetes	F	Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates	pyrG	-	6.3.4.2	ko:K01937	ko00240,ko01100,map00240,map01100	M00052	R00571,R00573	RC00010,RC00074	ko00000,ko00001,ko00002,ko01000	-	-	-	CTP_synth_N,GATase
BYD3_k127_6028369_3	153721.MYP_2919	4.646e-42	158.0	COG1595@1|root,COG1595@2|Bacteria,4NN4K@976|Bacteroidetes,47QDX@768503|Cytophagia	976|Bacteroidetes	K	TIGRFAM RNA polymerase sigma factor, sigma-70 family	fecI	-	-	-	-	-	-	-	-	-	-	-	Sigma70_r2,Sigma70_r4,Sigma70_r4_2
BYD3_k127_6028369_6	1185876.BN8_00343	1.725e-12	71.0	2E5Q2@1|root,30Y9M@2|Bacteria,4PC12@976|Bacteroidetes,47WNH@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_6028369_1	941449.dsx2_1856	4.259e-128	419.0	COG2201@1|root,COG2201@2|Bacteria,1MWCN@1224|Proteobacteria,42M27@68525|delta/epsilon subdivisions,2WJ2S@28221|Deltaproteobacteria,2M8VE@213115|Desulfovibrionales	28221|Deltaproteobacteria	NT	catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR	cheB34H	-	3.1.1.61,3.5.1.44	ko:K03412	ko02020,ko02030,map02020,map02030	M00506	-	-	ko00000,ko00001,ko00002,ko01000,ko02022,ko02035	-	-	-	CheB_methylest,Response_reg
BYD3_k127_6028369_2	927658.AJUM01000037_gene1997	2.025e-80	277.0	COG1352@1|root,COG1352@2|Bacteria,4NJ75@976|Bacteroidetes,2G228@200643|Bacteroidia,3XJ3U@558415|Marinilabiliaceae	976|Bacteroidetes	NT	Methyltransferase, chemotaxis proteins	-	-	2.1.1.80	ko:K00575	ko02020,ko02030,map02020,map02030	-	-	-	ko00000,ko00001,ko01000,ko02035	-	-	-	CheR,CheR_N
BYD3_k127_6028369_4	697282.Mettu_3198	6.198e-30	126.0	COG0835@1|root,COG0835@2|Bacteria,1RD1W@1224|Proteobacteria,1S26J@1236|Gammaproteobacteria,1XEZV@135618|Methylococcales	135618|Methylococcales	NT	PFAM CheW-like	-	-	-	ko:K03408	ko02020,ko02030,map02020,map02030	-	-	-	ko00000,ko00001,ko02035	-	-	-	CheW
BYD3_k127_6028369_0	1121904.ARBP01000013_gene417	2.474e-131	443.0	COG0643@1|root,COG0643@2|Bacteria,4NG31@976|Bacteroidetes,47MM7@768503|Cytophagia	976|Bacteroidetes	NT	Signal transducing histidine kinase, homodimeric domain	-	-	2.7.13.3	ko:K03407	ko02020,ko02030,map02020,map02030	M00506	-	-	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022,ko02035	-	-	-	CheW,H-kinase_dim,HATPase_c,Hpt
BYD3_k127_6028369_5	1121904.ARBP01000013_gene418	6.367e-29	119.0	COG0745@1|root,COG0745@2|Bacteria	1121904.ARBP01000013_gene418|-	T	phosphorelay signal transduction system	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_6072537_1	1168289.AJKI01000065_gene3764	1.615e-92	308.0	COG1136@1|root,COG1136@2|Bacteria,4NFDW@976|Bacteroidetes,2FMDA@200643|Bacteroidia,3XKRI@558415|Marinilabiliaceae	976|Bacteroidetes	V	ATPases associated with a variety of cellular activities	-	-	-	ko:K02003	-	M00258	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	ABC_tran
BYD3_k127_6072537_0	927658.AJUM01000011_gene1330	7.522e-114	396.0	COG0577@1|root,COG0577@2|Bacteria,4NFGD@976|Bacteroidetes,2FNP6@200643|Bacteroidia	976|Bacteroidetes	V	ABC transporter, permease protein	-	-	-	ko:K02004	-	M00258	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	FtsX,MacB_PCD
BYD3_k127_6077790_1	694427.Palpr_2667	3.078e-174	552.0	COG0642@1|root,COG2205@2|Bacteria,4NEZM@976|Bacteroidetes,2FN1Z@200643|Bacteroidia,22X0P@171551|Porphyromonadaceae	976|Bacteroidetes	T	Osmosensitive K+ channel His kinase sensor domain	-	-	2.7.13.3	ko:K07646	ko02020,map02020	M00454	-	-	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	-	-	-	DUF4118,HATPase_c,HisKA,KdpD
BYD3_k127_6077790_3	481448.Minf_0034	1.063e-06	55.0	COG2216@1|root,COG2216@2|Bacteria,46SEM@74201|Verrucomicrobia,37G7S@326457|unclassified Verrucomicrobia	74201|Verrucomicrobia	P	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system	kdpB	-	3.6.3.12	ko:K01547	ko02020,map02020	-	-	-	ko00000,ko00001,ko01000	3.A.3.7	-	-	E1-E2_ATPase,Hydrolase
BYD3_k127_6077790_4	1536770.R50345_02630	7.525e-06	49.0	COG2216@1|root,COG2216@2|Bacteria,1TPV5@1239|Firmicutes,4HASV@91061|Bacilli,26RE5@186822|Paenibacillaceae	91061|Bacilli	P	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system	kdpB	-	3.6.3.12	ko:K01547	ko02020,map02020	-	-	-	ko00000,ko00001,ko01000	3.A.3.7	-	-	E1-E2_ATPase,Hydrolase
BYD3_k127_6077790_0	694427.Palpr_0513	2.28e-237	752.0	COG3158@1|root,COG3158@2|Bacteria,4NET9@976|Bacteroidetes,2FNRB@200643|Bacteroidia,22W4Z@171551|Porphyromonadaceae	976|Bacteroidetes	P	K+ potassium transporter	kup	-	-	ko:K03549	-	-	-	-	ko00000,ko02000	2.A.72	-	-	K_trans
BYD3_k127_6077790_2	1121373.KB903621_gene1883	3.977e-146	471.0	COG0475@1|root,COG0475@2|Bacteria,4NFPE@976|Bacteroidetes,47NZK@768503|Cytophagia	976|Bacteroidetes	P	Sodium/hydrogen exchanger family	nhaS3	-	-	-	-	-	-	-	-	-	-	-	Na_H_Exchanger
BYD3_k127_6095160_10	526218.Sterm_2247	1.874e-13	76.0	COG2849@1|root,COG2849@2|Bacteria,37C58@32066|Fusobacteria	32066|Fusobacteria	S	Repeat protein	-	-	-	-	-	-	-	-	-	-	-	-	MORN_2
BYD3_k127_6095160_9	1453500.AT05_11465	1.367e-29	123.0	COG4731@1|root,COG4731@2|Bacteria,4NQCK@976|Bacteroidetes,1I569@117743|Flavobacteriia	976|Bacteroidetes	S	Uncharacterized protein conserved in bacteria (DUF2147)	-	-	-	-	-	-	-	-	-	-	-	-	DUF2147
BYD3_k127_6095160_7	1168034.FH5T_04800	1.419e-52	190.0	COG0262@1|root,COG0262@2|Bacteria,4NQ2Y@976|Bacteroidetes,2FT42@200643|Bacteroidia	976|Bacteroidetes	H	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis	folA	-	1.5.1.3	ko:K00287	ko00670,ko00790,ko01100,ko01523,map00670,map00790,map01100,map01523	M00126,M00840	R00936,R00937,R00939,R00940,R02235,R02236,R11765	RC00109,RC00110,RC00158	ko00000,ko00001,ko00002,ko01000	-	-	-	2TM,DHFR_1
BYD3_k127_6095160_3	1189612.A33Q_3056	8.139e-136	435.0	COG0207@1|root,COG0207@2|Bacteria,4NEC2@976|Bacteroidetes,47KE8@768503|Cytophagia	976|Bacteroidetes	F	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis	thyA	-	2.1.1.45	ko:K00560	ko00240,ko00670,ko01100,ko01523,map00240,map00670,map01100,map01523	M00053	R02101	RC00219,RC00332	ko00000,ko00001,ko00002,ko01000	-	-	-	Thymidylat_synt
BYD3_k127_6095160_11	1249997.JHZW01000003_gene2150	6.173e-13	79.0	COG2133@1|root,COG3291@1|root,COG2133@2|Bacteria,COG3291@2|Bacteria,4PI47@976|Bacteroidetes,1IM97@117743|Flavobacteriia,2PI57@252356|Maribacter	976|Bacteroidetes	G	Glucose / Sorbosone dehydrogenase	-	-	-	-	-	-	-	-	-	-	-	-	GSDH,PKD
BYD3_k127_6095160_1	1168034.FH5T_04625	5.846e-145	486.0	COG1752@1|root,COG4775@1|root,COG1752@2|Bacteria,COG4775@2|Bacteria,4NDXY@976|Bacteroidetes,2FNEV@200643|Bacteroidia	976|Bacteroidetes	M	Phospholipase, patatin family	-	-	-	ko:K07001	-	-	-	-	ko00000	-	-	-	Bac_surface_Ag,POTRA,Patatin
BYD3_k127_6095160_5	153721.MYP_1887	1.943e-93	310.0	COG0605@1|root,COG0605@2|Bacteria,4NDZ4@976|Bacteroidetes,47JJV@768503|Cytophagia	976|Bacteroidetes	P	Destroys radicals which are normally produced within the cells and which are toxic to biological systems	sodA	-	1.15.1.1	ko:K04564	ko04013,ko04068,ko04146,ko04211,ko04212,ko04213,ko05016,map04013,map04068,map04146,map04211,map04212,map04213,map05016	-	-	-	ko00000,ko00001,ko01000	-	-	-	Sod_Fe_C,Sod_Fe_N
BYD3_k127_6095160_4	709991.Odosp_2208	3.781e-120	400.0	COG1519@1|root,COG1519@2|Bacteria,4NESA@976|Bacteroidetes,2FPNI@200643|Bacteroidia,22XA0@171551|Porphyromonadaceae	976|Bacteroidetes	M	transferase	waaA	-	2.4.99.12,2.4.99.13,2.4.99.14,2.4.99.15	ko:K02527	ko00540,ko01100,map00540,map01100	M00060,M00080	R04658,R05074,R09763	RC00009,RC00077,RC00247	ko00000,ko00001,ko00002,ko01000,ko01003,ko01005	-	GT30	-	Glycos_transf_N
BYD3_k127_6095160_8	192952.MM_2719	4.101e-43	167.0	COG1418@1|root,arCOG01860@2157|Archaea,2XY6N@28890|Euryarchaeota,2NAQ5@224756|Methanomicrobia	224756|Methanomicrobia	S	Metal dependent phosphohydrolases with conserved 'HD' motif.	-	-	-	-	-	-	-	-	-	-	-	-	HD
BYD3_k127_6095160_0	657309.BXY_17850	2.115e-167	532.0	COG3934@1|root,COG3934@2|Bacteria,4NGQC@976|Bacteroidetes,2FR92@200643|Bacteroidia,4AP2V@815|Bacteroidaceae	976|Bacteroidetes	G	Cellulase (glycosyl hydrolase family 5)	-	-	-	-	-	-	-	-	-	-	-	-	Cellulase,Glyco_hydro_2_C
BYD3_k127_6095160_6	471870.BACINT_02241	2.036e-92	310.0	COG1212@1|root,COG1212@2|Bacteria,4NG4B@976|Bacteroidetes,2FMHD@200643|Bacteroidia,4AM4U@815|Bacteroidaceae	976|Bacteroidetes	H	Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria	kdsB	-	2.7.7.38	ko:K00979	ko00540,ko01100,map00540,map01100	M00063	R03351,R11396	RC00152,RC00910	ko00000,ko00001,ko00002,ko01000,ko01005	-	-	-	CTP_transf_3
BYD3_k127_6095160_2	927658.AJUM01000034_gene236	7.586e-144	463.0	COG2204@1|root,COG2204@2|Bacteria,4NDWI@976|Bacteroidetes,2FMNM@200643|Bacteroidia,3XIN4@558415|Marinilabiliaceae	976|Bacteroidetes	T	Bacterial regulatory protein, Fis family	fhlA	-	-	-	-	-	-	-	-	-	-	-	HTH_8,Sigma54_activat
BYD3_k127_6141327_16	313606.M23134_08170	8.272e-08	60.0	2DV37@1|root,33TU3@2|Bacteria,4P2WB@976|Bacteroidetes,47UPS@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_6141327_9	1168034.FH5T_06725	6.539e-64	224.0	COG0328@1|root,COG0328@2|Bacteria,4NNQX@976|Bacteroidetes,2FSJX@200643|Bacteroidia	976|Bacteroidetes	L	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids	rnhA	-	3.1.26.4	ko:K03469	ko03030,map03030	-	-	-	ko00000,ko00001,ko01000,ko03032	-	-	-	RNase_H
BYD3_k127_6141327_11	1042376.AFPK01000005_gene2537	1.455e-58	209.0	COG2095@1|root,COG2095@2|Bacteria,4NG94@976|Bacteroidetes,1HXJM@117743|Flavobacteriia,406AI@61432|unclassified Flavobacteriaceae	976|Bacteroidetes	U	MarC family integral membrane protein	marC	-	-	ko:K05595	-	-	-	-	ko00000,ko02000	2.A.95.1	-	-	MarC
BYD3_k127_6141327_2	385682.AFSL01000068_gene1445	9.27e-250	790.0	COG3591@1|root,COG3591@2|Bacteria,4NEAK@976|Bacteroidetes,2FMI1@200643|Bacteroidia,3XJ9S@558415|Marinilabiliaceae	976|Bacteroidetes	E	Peptidase S46	dpp7	GO:0003674,GO:0003824,GO:0004177,GO:0005488,GO:0005575,GO:0005623,GO:0006508,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008236,GO:0008238,GO:0008239,GO:0009056,GO:0009279,GO:0009987,GO:0016020,GO:0016787,GO:0017171,GO:0019538,GO:0019867,GO:0030312,GO:0030313,GO:0031975,GO:0033218,GO:0034641,GO:0042277,GO:0043170,GO:0043171,GO:0043603,GO:0044237,GO:0044238,GO:0044248,GO:0044462,GO:0044464,GO:0070011,GO:0071704,GO:0071944,GO:0140096,GO:1901564,GO:1901565,GO:1901575	-	-	-	-	-	-	-	-	-	-	Peptidase_S46
BYD3_k127_6141327_8	1408473.JHXO01000001_gene2298	8.608e-79	267.0	COG0164@1|root,COG0164@2|Bacteria,4NGVR@976|Bacteroidetes,2FMS7@200643|Bacteroidia	976|Bacteroidetes	L	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids	rnhB	GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004523,GO:0004540,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006271,GO:0006273,GO:0006281,GO:0006298,GO:0006401,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009987,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0019439,GO:0022616,GO:0032299,GO:0032991,GO:0033554,GO:0033567,GO:0034641,GO:0034645,GO:0034655,GO:0043137,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044270,GO:0044424,GO:0044464,GO:0046483,GO:0046700,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0140098,GO:1901360,GO:1901361,GO:1901575,GO:1901576	3.1.26.4	ko:K03470	ko03030,map03030	-	-	-	ko00000,ko00001,ko01000,ko03032	-	-	-	RNase_HII
BYD3_k127_6141327_6	1168034.FH5T_06745	8.272e-116	389.0	COG2244@1|root,COG2244@2|Bacteria,4NPGZ@976|Bacteroidetes,2G3BA@200643|Bacteroidia	976|Bacteroidetes	S	Polysaccharide biosynthesis protein	-	-	-	-	-	-	-	-	-	-	-	-	Polysacc_synt,Polysacc_synt_C
BYD3_k127_6141327_12	1408473.JHXO01000001_gene2476	6.802e-58	210.0	COG1521@1|root,COG1521@2|Bacteria,4NE9E@976|Bacteroidetes,2FMPK@200643|Bacteroidia	976|Bacteroidetes	F	Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis	coaX	-	2.7.1.33	ko:K03525	ko00770,ko01100,map00770,map01100	M00120	R02971,R03018,R04391	RC00002,RC00017	ko00000,ko00001,ko00002,ko01000	-	-	-	Pan_kinase
BYD3_k127_6141327_15	742817.HMPREF9449_03008	1e-25	114.0	COG3117@1|root,COG3117@2|Bacteria,4NSXY@976|Bacteroidetes,2G2BC@200643|Bacteroidia	976|Bacteroidetes	S	Lipopolysaccharide-assembly, LptC-related	-	-	-	-	-	-	-	-	-	-	-	-	LptC
BYD3_k127_6141327_5	1235803.C825_03721	2.484e-122	405.0	COG1253@1|root,COG1253@2|Bacteria,4NG0I@976|Bacteroidetes,2FMR1@200643|Bacteroidia,22X0Y@171551|Porphyromonadaceae	976|Bacteroidetes	S	Hemolysin	tlyC	-	-	ko:K03699	-	-	-	-	ko00000,ko02042	-	-	-	CBS,CorC_HlyC,DUF21
BYD3_k127_6141327_4	886379.AEWI01000018_gene1259	1.079e-157	521.0	COG0760@1|root,COG0760@2|Bacteria,4NDZZ@976|Bacteroidetes,2FN8C@200643|Bacteroidia,3XJMY@558415|Marinilabiliaceae	976|Bacteroidetes	O	SurA N-terminal domain	ppiD	-	5.2.1.8	ko:K01802,ko:K03770	-	-	-	-	ko00000,ko01000,ko03110	-	-	-	Rotamase_2,Rotamase_3,SurA_N_2
BYD3_k127_6141327_3	1408473.JHXO01000001_gene2325	9.07e-209	654.0	COG0156@1|root,COG0156@2|Bacteria,4NFBU@976|Bacteroidetes,2FN0E@200643|Bacteroidia	976|Bacteroidetes	H	Catalyzes the cleavage of 2-amino-3-ketobutyrate to glycine and acetyl-CoA	kbl	-	2.3.1.29	ko:K00639	ko00260,map00260	-	R00371	RC00004,RC00394	ko00000,ko00001,ko01000,ko01007	-	-	-	Aminotran_1_2
BYD3_k127_6141327_7	1250006.JHZZ01000001_gene1264	3.988e-115	380.0	COG0451@1|root,COG0451@2|Bacteria,4NE3U@976|Bacteroidetes,1HWX0@117743|Flavobacteriia,3VW93@52959|Polaribacter	976|Bacteroidetes	M	Male sterility protein	ltd	-	-	-	-	-	-	-	-	-	-	-	Epimerase
BYD3_k127_6141327_0	694427.Palpr_2723	1.589e-280	882.0	COG0363@1|root,COG0363@2|Bacteria,4NDUN@976|Bacteroidetes,2FM2W@200643|Bacteroidia,22WHT@171551|Porphyromonadaceae	976|Bacteroidetes	G	glucosamine-6-phosphate deaminase	nagB	-	3.5.99.6	ko:K02564	ko00520,ko01100,map00520,map01100	-	R00765	RC00163	ko00000,ko00001,ko01000	-	-	-	Glucosamine_iso,PIG-L
BYD3_k127_6141327_10	926549.KI421517_gene846	1.563e-60	218.0	COG4589@1|root,COG4589@2|Bacteria,4NIPM@976|Bacteroidetes,47KPM@768503|Cytophagia	976|Bacteroidetes	S	Belongs to the CDS family	cdsA	-	2.7.7.41	ko:K00981	ko00564,ko01100,ko01110,ko04070,map00564,map01100,map01110,map04070	M00093	R01799	RC00002	ko00000,ko00001,ko00002,ko01000	-	-	-	CTP_transf_1
BYD3_k127_6141327_1	1408473.JHXO01000006_gene1201	2.282e-270	848.0	COG0465@1|root,COG0465@2|Bacteria,4NF0E@976|Bacteroidetes,2FNEA@200643|Bacteroidia	976|Bacteroidetes	O	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins	ftsH	-	-	ko:K03798	-	M00742	-	-	ko00000,ko00002,ko01000,ko01002,ko03110	-	-	-	AAA,FtsH_ext,Peptidase_M41
BYD3_k127_6141327_14	1408473.JHXO01000006_gene1202	2.111e-32	130.0	COG0799@1|root,COG0799@2|Bacteria,4NSKK@976|Bacteroidetes,2FSG4@200643|Bacteroidia	976|Bacteroidetes	J	Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation	rsfS	-	-	ko:K09710	-	-	-	-	ko00000,ko03009	-	-	-	RsfS
BYD3_k127_6141327_13	742766.HMPREF9455_02093	6.677e-49	184.0	COG0340@1|root,COG0340@2|Bacteria,4NHCH@976|Bacteroidetes,2FMM7@200643|Bacteroidia,22XZH@171551|Porphyromonadaceae	976|Bacteroidetes	H	Biotin/lipoate A/B protein ligase family	birA	-	6.3.4.15	ko:K03524	ko00780,ko01100,map00780,map01100	-	R01074,R05145	RC00043,RC00070,RC00096,RC02896	ko00000,ko00001,ko01000,ko03000	-	-	-	BPL_LplA_LipB
BYD3_k127_6150895_0	1168034.FH5T_05345	0.0	1406.0	COG0495@1|root,COG0495@2|Bacteria,4NE5K@976|Bacteroidetes,2FM7V@200643|Bacteroidia	976|Bacteroidetes	J	Belongs to the class-I aminoacyl-tRNA synthetase family	leuS	GO:0003674,GO:0003824,GO:0004812,GO:0004823,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006429,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576	6.1.1.4	ko:K01869	ko00970,map00970	M00359,M00360	R03657	RC00055,RC00523	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029	-	-	-	Anticodon_1,DUF559,tRNA-synt_1,tRNA-synt_1_2
BYD3_k127_6150895_5	385682.AFSL01000090_gene946	7.351e-120	399.0	COG0739@1|root,COG0739@2|Bacteria,4NECF@976|Bacteroidetes,2FQ2Q@200643|Bacteroidia,3XIZ3@558415|Marinilabiliaceae	976|Bacteroidetes	M	Peptidase family M23	-	-	-	-	-	-	-	-	-	-	-	-	Peptidase_M23
BYD3_k127_6150895_9	1123248.KB893385_gene4837	1.693e-80	276.0	COG0084@1|root,COG0084@2|Bacteria,4NEVW@976|Bacteroidetes,1INMV@117747|Sphingobacteriia	976|Bacteroidetes	L	TIGRFAM hydrolase, TatD family	tatD	-	-	ko:K03424	-	-	-	-	ko00000,ko01000	-	-	-	TatD_DNase
BYD3_k127_6150895_4	411479.BACUNI_01864	4.855e-128	417.0	COG0252@1|root,COG0252@2|Bacteria,4NE2Z@976|Bacteroidetes,2FM3E@200643|Bacteroidia,4ANB4@815|Bacteroidaceae	976|Bacteroidetes	EJ	L-asparaginase, type I	ansA	-	3.5.1.1	ko:K01424	ko00250,ko00460,ko01100,ko01110,map00250,map00460,map01100,map01110	-	R00485	RC00010,RC02798	ko00000,ko00001,ko01000	-	-	-	Asparaginase
BYD3_k127_6150895_13	926549.KI421517_gene2871	1.007e-22	101.0	COG3162@1|root,COG3162@2|Bacteria	2|Bacteria	S	Protein of unknown function, DUF485	yjcH	-	-	-	-	-	-	-	-	-	-	-	DUF485
BYD3_k127_6150895_1	926549.KI421517_gene2870	1.917e-218	688.0	COG4147@1|root,COG4147@2|Bacteria,4NHPT@976|Bacteroidetes,47JSK@768503|Cytophagia	976|Bacteroidetes	S	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family	actP	-	-	ko:K14393	-	-	-	-	ko00000,ko02000	2.A.21.7	-	-	SSF
BYD3_k127_6150895_11	1107311.Q767_03065	1.431e-59	219.0	2CSRV@1|root,32SRR@2|Bacteria,4NTI6@976|Bacteroidetes	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	NlpE
BYD3_k127_6150895_2	997346.HMPREF9374_3726	4.322e-154	504.0	COG0028@1|root,COG0028@2|Bacteria,1TQE8@1239|Firmicutes,4HBUS@91061|Bacilli,27CPD@186824|Thermoactinomycetaceae	91061|Bacilli	EH	Thiamine pyrophosphate enzyme, central domain	-	-	1.2.3.3	ko:K00158	ko00620,ko01100,map00620,map01100	-	R00207	RC02745	ko00000,ko00001,ko01000	-	-	-	TPP_enzyme_C,TPP_enzyme_M,TPP_enzyme_N
BYD3_k127_6150895_3	1123234.AUKI01000021_gene933	7.755e-133	441.0	COG0665@1|root,COG0723@1|root,COG0665@2|Bacteria,COG0723@2|Bacteria,4NFT6@976|Bacteroidetes,1I14A@117743|Flavobacteriia	976|Bacteroidetes	CE	fad dependent oxidoreductase	-	-	-	-	-	-	-	-	-	-	-	-	DAO,Rieske
BYD3_k127_6150895_14	658187.LDG_8953	1.039e-17	87.0	2ECSH@1|root,336Q2@2|Bacteria,1QBQ8@1224|Proteobacteria,1T7A9@1236|Gammaproteobacteria,1JF4B@118969|Legionellales	118969|Legionellales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_6150895_8	1123248.KB893337_gene2570	8.679e-90	304.0	COG2146@1|root,COG4244@1|root,COG2146@2|Bacteria,COG4244@2|Bacteria,4NPHV@976|Bacteroidetes	976|Bacteroidetes	P	Predicted membrane protein (DUF2231)	-	-	-	-	-	-	-	-	-	-	-	-	DUF2231
BYD3_k127_6150895_10	926549.KI421517_gene3964	2.837e-63	227.0	COG4242@1|root,COG4242@2|Bacteria,4NI55@976|Bacteroidetes,47PDB@768503|Cytophagia	976|Bacteroidetes	PQ	Peptidase family S51	cphB	-	3.4.15.6	ko:K13282	-	-	R09722	RC00064,RC00141	ko00000,ko01000,ko01002	-	-	-	Peptidase_S51
BYD3_k127_6150895_6	694427.Palpr_2054	1.53e-119	397.0	COG0758@1|root,COG1948@1|root,COG0758@2|Bacteria,COG1948@2|Bacteria,4NF7T@976|Bacteroidetes,2FKYE@200643|Bacteroidia,22WZ4@171551|Porphyromonadaceae	976|Bacteroidetes	LU	DNA protecting protein DprA	dprA	-	-	ko:K04096	-	-	-	-	ko00000	-	-	-	DNA_processg_A,HHH_5
BYD3_k127_6150895_16	1408473.JHXO01000001_gene2401	1.309e-05	53.0	2944V@1|root,2ZRJE@2|Bacteria,4P86S@976|Bacteroidetes,2FZVB@200643|Bacteroidia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_6150895_7	471854.Dfer_3718	7.7e-90	302.0	2BZ6M@1|root,2Z7HW@2|Bacteria,4NDZE@976|Bacteroidetes,47M8V@768503|Cytophagia	976|Bacteroidetes	S	Domain of Unknown Function (DUF1080)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1080
BYD3_k127_6150895_12	743722.Sph21_1067	1.825e-58	206.0	COG0590@1|root,COG0590@2|Bacteria,4NNJ2@976|Bacteroidetes,1ISDN@117747|Sphingobacteriia	976|Bacteroidetes	FJ	Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2)	tadA	-	3.5.4.33	ko:K11991	-	-	R10223	RC00477	ko00000,ko01000,ko03016	-	-	-	MafB19-deam
BYD3_k127_6162213_4	1540257.JQMW01000011_gene1453	1.979e-44	166.0	COG1606@1|root,COG1606@2|Bacteria,1TPB2@1239|Firmicutes,2485J@186801|Clostridia,36DE3@31979|Clostridiaceae	186801|Clostridia	S	TIGRFAM TIGR00268 family protein	-	-	-	ko:K06864	-	-	-	-	ko00000	-	-	-	ATP_bind_3,NAD_synthase,QueC
BYD3_k127_6162213_0	1321778.HMPREF1982_00714	1.988e-143	465.0	COG1641@1|root,COG1641@2|Bacteria,1TPAV@1239|Firmicutes,247ZH@186801|Clostridia,268B6@186813|unclassified Clostridiales	186801|Clostridia	S	Involved in the biosynthesis of a nickel-pincer cofactor ((SCS)Ni(II) pincer complex). Binds Ni(2 ), and functions in nickel delivery to pyridinium-3,5-bisthiocarboxylic acid mononucleotide (P2TMN), to form the mature cofactor. Is thus probably required for the activation of nickel-pincer cofactor- dependent enzymes	larC	-	4.99.1.12	ko:K09121	-	-	-	-	ko00000,ko01000	-	-	-	DUF111
BYD3_k127_6162213_2	313606.M23134_00218	1.183e-74	258.0	COG3279@1|root,COG3279@2|Bacteria,4NI3K@976|Bacteroidetes,47PDV@768503|Cytophagia	976|Bacteroidetes	T	LytTr DNA-binding domain	-	-	-	-	-	-	-	-	-	-	-	-	LytTR,Response_reg
BYD3_k127_6162213_1	1168034.FH5T_01590	6.645e-101	342.0	COG2972@1|root,COG2972@2|Bacteria,4NH1Q@976|Bacteroidetes,2FYBB@200643|Bacteroidia	976|Bacteroidetes	T	Histidine kinase	-	-	-	-	-	-	-	-	-	-	-	-	His_kinase
BYD3_k127_6162213_3	1047013.AQSP01000130_gene1851	5.379e-67	245.0	COG1453@1|root,COG1453@2|Bacteria,2NNZZ@2323|unclassified Bacteria	2|Bacteria	S	Aldo/keto reductase family	-	-	-	ko:K07079	-	-	-	-	ko00000	-	-	-	Aldo_ket_red,Fer4_17
BYD3_k127_6171279_2	1235788.C802_00610	1.5e-42	160.0	COG3118@1|root,COG3118@2|Bacteria,4NQNX@976|Bacteroidetes,2FSPP@200643|Bacteroidia,4ANK1@815|Bacteroidaceae	976|Bacteroidetes	O	Psort location Cytoplasmic, score 9.26	-	-	-	-	-	-	-	-	-	-	-	-	Thioredoxin
BYD3_k127_6171279_1	742817.HMPREF9449_00713	1.426e-93	325.0	COG1957@1|root,COG2191@1|root,COG1957@2|Bacteria,COG2191@2|Bacteria,4PITJ@976|Bacteroidetes,2FXEM@200643|Bacteroidia	976|Bacteroidetes	CF	FmdE, Molybdenum formylmethanofuran dehydrogenase operon	-	-	-	ko:K01250	-	-	-	-	ko00000,ko01000	-	-	-	FmdE,IU_nuc_hydro
BYD3_k127_6171279_0	1227739.Hsw_1037	1.828e-108	373.0	COG2730@1|root,COG2730@2|Bacteria,4NIBG@976|Bacteroidetes,47JMG@768503|Cytophagia	976|Bacteroidetes	G	Cellulase (glycosyl hydrolase family 5)	eglS	-	3.2.1.4	ko:K01179	ko00500,ko01100,map00500,map01100	-	R06200,R11307,R11308	-	ko00000,ko00001,ko01000	-	GH5,GH9	-	CBM_6,Cellulase
BYD3_k127_6171279_4	661478.OP10G_3804	5.576e-19	100.0	COG4099@1|root,COG4099@2|Bacteria	2|Bacteria	F	phospholipase Carboxylesterase	-	-	-	-	-	-	-	-	-	-	-	-	Abhydrolase_2,Abhydrolase_8,DLH,Esterase,Peptidase_S9
BYD3_k127_6171279_3	143224.JQMD01000002_gene2486	3.332e-33	138.0	2CJWE@1|root,30Y1E@2|Bacteria,4NNQQ@976|Bacteroidetes,1I40A@117743|Flavobacteriia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_618229_0	344747.PM8797T_26465	1.658e-79	280.0	COG2706@1|root,COG2706@2|Bacteria,2IY02@203682|Planctomycetes	203682|Planctomycetes	G	COG2706 3-carboxymuconate cyclase	-	-	3.1.1.31	ko:K07404	ko00030,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map01100,map01110,map01120,map01130,map01200	M00004,M00006,M00008	R02035	RC00537	ko00000,ko00001,ko00002,ko01000	-	-	-	Lactonase
BYD3_k127_618229_1	1408473.JHXO01000011_gene3087	4.636e-34	138.0	COG1595@1|root,COG1595@2|Bacteria,4NS12@976|Bacteroidetes,2FQ76@200643|Bacteroidia	976|Bacteroidetes	K	RNA polymerase sigma-70 factor	-	-	-	ko:K03088	-	-	-	-	ko00000,ko03021	-	-	-	Sigma70_r2,Sigma70_r4_2
BYD3_k127_618229_2	1443665.JACA01000059_gene1130	1.201e-30	133.0	COG3712@1|root,COG3712@2|Bacteria,4NKN5@976|Bacteroidetes,1I4IC@117743|Flavobacteriia,2YJB9@290174|Aquimarina	976|Bacteroidetes	PT	FecR protein	-	-	-	-	-	-	-	-	-	-	-	-	DUF4880,DUF4974,FecR
BYD3_k127_618229_3	1123035.ARLA01000025_gene1328	1.715e-08	64.0	COG2304@1|root,COG2304@2|Bacteria,4NKZ6@976|Bacteroidetes,1IFZZ@117743|Flavobacteriia,4C41B@83612|Psychroflexus	976|Bacteroidetes	S	CarboxypepD_reg-like domain	-	-	-	-	-	-	-	-	-	-	-	-	CarbopepD_reg_2
BYD3_k127_6186790_4	435591.BDI_1080	3.215e-23	100.0	2DMZP@1|root,32UMQ@2|Bacteria,4P3H1@976|Bacteroidetes,2FT4E@200643|Bacteroidia,230IW@171551|Porphyromonadaceae	976|Bacteroidetes	S	Protein of unknown function (DUF3795)	-	-	-	-	-	-	-	-	-	-	-	-	DUF3795
BYD3_k127_6186790_1	269797.Mbar_A1359	1.149e-66	230.0	arCOG05193@1|root,arCOG05193@2157|Archaea	2157|Archaea	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_6186790_3	1237149.C900_01132	1.817e-24	109.0	2B09D@1|root,31SK9@2|Bacteria,4NS49@976|Bacteroidetes,47VWU@768503|Cytophagia	976|Bacteroidetes	S	Putative zincin peptidase	-	-	-	-	-	-	-	-	-	-	-	-	DUF3267
BYD3_k127_6186790_5	1172185.KB911509_gene109	8.58e-06	54.0	COG0443@1|root,COG0443@2|Bacteria,2IG0F@201174|Actinobacteria,4G295@85025|Nocardiaceae	201174|Actinobacteria	O	Heat shock 70 kDa protein	-	GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944	-	ko:K18481	-	M00670	-	-	ko00000,ko00002,ko02000	3.A.1.27.4,3.A.1.27.5	-	-	-
BYD3_k127_6186790_0	1250005.PHEL85_1129	6.232e-72	249.0	COG3279@1|root,COG3279@2|Bacteria,4NMTK@976|Bacteroidetes,1IIMU@117743|Flavobacteriia	976|Bacteroidetes	KT	LytTr DNA-binding domain	-	-	-	-	-	-	-	-	-	-	-	-	LytTR,Response_reg
BYD3_k127_6186790_2	1189612.A33Q_3424	3.234e-59	219.0	COG2972@1|root,COG2972@2|Bacteria,4NGQZ@976|Bacteroidetes,47MAG@768503|Cytophagia	976|Bacteroidetes	T	PFAM histidine kinase	-	-	-	-	-	-	-	-	-	-	-	-	HATPase_c_5,His_kinase
BYD3_k127_6247869_12	886379.AEWI01000023_gene20	2.083e-41	154.0	COG0782@1|root,COG0782@2|Bacteria,4NNH6@976|Bacteroidetes,2FPFU@200643|Bacteroidia,3XJU5@558415|Marinilabiliaceae	976|Bacteroidetes	K	Transcription elongation factor, N-terminal	greA	-	-	ko:K03624	-	-	-	-	ko00000,ko03021	-	-	-	GreA_GreB,GreA_GreB_N
BYD3_k127_6247869_10	886379.AEWI01000023_gene19	4.956e-59	208.0	COG0537@1|root,COG0537@2|Bacteria,4NQ4X@976|Bacteroidetes,2FSRY@200643|Bacteroidia,3XK4J@558415|Marinilabiliaceae	976|Bacteroidetes	FG	HIT domain	hinT	-	-	ko:K02503	-	-	-	-	ko00000,ko04147	-	-	-	HIT
BYD3_k127_6247869_9	927658.AJUM01000037_gene2229	5.62e-60	212.0	COG0817@1|root,COG0817@2|Bacteria,4NDV6@976|Bacteroidetes,2FNM6@200643|Bacteroidia,3XISM@558415|Marinilabiliaceae	976|Bacteroidetes	L	Crossover junction endodeoxyribonuclease RuvC	ruvC	-	3.1.22.4	ko:K01159	ko03440,map03440	-	-	-	ko00000,ko00001,ko01000,ko03400	-	-	-	RuvC
BYD3_k127_6247869_7	1121904.ARBP01000005_gene4827	2.201e-74	265.0	COG0793@1|root,COG0793@2|Bacteria,4NFKJ@976|Bacteroidetes,47NZS@768503|Cytophagia	976|Bacteroidetes	M	Peptidase family S41	-	-	-	-	-	-	-	-	-	-	-	-	PDZ_2,Peptidase_S41
BYD3_k127_6247869_5	1343739.PAP_00225	4.735e-80	277.0	COG0697@1|root,arCOG00271@2157|Archaea,2XXKE@28890|Euryarchaeota,2434U@183968|Thermococci	183968|Thermococci	G	EamA-like transporter family	-	-	-	-	-	-	-	-	-	-	-	-	EamA
BYD3_k127_6247869_1	1211813.CAPH01000009_gene140	3.107e-188	596.0	COG0172@1|root,COG0172@2|Bacteria,4NED6@976|Bacteroidetes,2FN99@200643|Bacteroidia,22UY5@171550|Rikenellaceae	976|Bacteroidetes	J	Seryl-tRNA synthetase N-terminal domain	serS	-	6.1.1.11	ko:K01875	ko00970,map00970	M00359,M00360	R03662,R08218	RC00055,RC00523	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	-	-	-	Seryl_tRNA_N,tRNA-synt_2b
BYD3_k127_6247869_13	1517682.HW49_08405	4.763e-39	146.0	COG0211@1|root,COG0211@2|Bacteria,4NS7T@976|Bacteroidetes,2FTXU@200643|Bacteroidia,22YG4@171551|Porphyromonadaceae	976|Bacteroidetes	J	Belongs to the bacterial ribosomal protein bL27 family	rpmA	GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904	-	ko:K02899	ko03010,map03010	M00178	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_L27
BYD3_k127_6247869_14	1336803.PHEL49_0089	2.788e-36	143.0	COG0261@1|root,COG0261@2|Bacteria,4NSHE@976|Bacteroidetes,1HYAI@117743|Flavobacteriia,3VV0J@52959|Polaribacter	976|Bacteroidetes	J	This protein binds to 23S rRNA in the presence of protein L20	rplU	GO:0003674,GO:0003735,GO:0005198	-	ko:K02888	ko03010,map03010	M00178	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	HHH_5,Rho_N,Ribosomal_L21p
BYD3_k127_6247869_8	886379.AEWI01000023_gene73	1.307e-73	252.0	COG1259@1|root,COG1259@2|Bacteria,4NGSW@976|Bacteroidetes,2FTKZ@200643|Bacteroidia,3XJVC@558415|Marinilabiliaceae	976|Bacteroidetes	S	Bifunctional nuclease	-	-	-	ko:K08999	-	-	-	-	ko00000	-	-	-	DNase-RNase,UVR
BYD3_k127_6247869_3	1408473.JHXO01000015_gene1905	2.555e-100	357.0	COG0642@1|root,COG2202@1|root,COG5002@1|root,COG2202@2|Bacteria,COG2205@2|Bacteria,COG5002@2|Bacteria,4NDXU@976|Bacteroidetes,2FM06@200643|Bacteroidia	976|Bacteroidetes	T	Psort location CytoplasmicMembrane, score	-	-	-	-	-	-	-	-	-	-	-	-	HATPase_c,HisKA,PAS_3,PAS_4,PAS_9,Response_reg
BYD3_k127_6247869_11	1122226.AUHX01000011_gene362	4.969e-51	195.0	COG1215@1|root,COG1215@2|Bacteria,4NG9C@976|Bacteroidetes,1HXPD@117743|Flavobacteriia	976|Bacteroidetes	M	probably involved in cell wall biogenesis	-	-	-	-	-	-	-	-	-	-	-	-	Glyco_tranf_2_3,Glycos_transf_2
BYD3_k127_6247869_0	385682.AFSL01000060_gene1763	0.0	1053.0	COG0514@1|root,COG0514@2|Bacteria,4NEB4@976|Bacteroidetes,2FMBR@200643|Bacteroidia,3XJ41@558415|Marinilabiliaceae	976|Bacteroidetes	L	RQC	recQ	-	3.6.4.12	ko:K03654	ko03018,map03018	-	-	-	ko00000,ko00001,ko01000,ko03400	-	-	-	DEAD,HRDC,Helicase_C,RQC,RecQ_Zn_bind
BYD3_k127_6247869_4	1168034.FH5T_04875	2.044e-89	303.0	COG0805@1|root,COG0805@2|Bacteria,4NEKM@976|Bacteroidetes,2FNUF@200643|Bacteroidia	976|Bacteroidetes	U	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes	tatC	-	-	ko:K03118	ko03060,ko03070,map03060,map03070	M00336	-	-	ko00000,ko00001,ko00002,ko02044	2.A.64	-	-	TatC
BYD3_k127_6247869_2	709991.Odosp_1672	2.338e-120	389.0	COG1137@1|root,COG1137@2|Bacteria,4NDUG@976|Bacteroidetes,2FKZE@200643|Bacteroidia,22XAY@171551|Porphyromonadaceae	976|Bacteroidetes	S	ABC transporter	lptB	-	-	ko:K06861	ko02010,map02010	M00320	-	-	ko00000,ko00001,ko00002,ko01000,ko02000	1.B.42.1	-	-	ABC_tran,BCA_ABC_TP_C
BYD3_k127_6247869_6	443254.Marpi_0588	3.652e-79	267.0	COG2768@1|root,COG2768@2|Bacteria,2GC95@200918|Thermotogae	200918|Thermotogae	C	4Fe-4S ferredoxin iron-sulfur binding domain protein	-	-	-	ko:K07138	-	-	-	-	ko00000	-	-	-	DUF362,Fer4
BYD3_k127_6262348_3	742725.HMPREF9450_00953	3.057e-07	58.0	29CFT@1|root,2ZZE6@2|Bacteria,4PFDR@976|Bacteroidetes,2G1ST@200643|Bacteroidia,22UKA@171550|Rikenellaceae	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_6262348_2	886379.AEWI01000002_gene492	1.397e-61	220.0	COG0605@1|root,COG0605@2|Bacteria,4NDZ4@976|Bacteroidetes,2FSHE@200643|Bacteroidia,3XJKK@558415|Marinilabiliaceae	976|Bacteroidetes	P	Iron/manganese superoxide dismutases, alpha-hairpin domain	sodA	-	1.15.1.1	ko:K04564	ko04013,ko04068,ko04146,ko04211,ko04212,ko04213,ko05016,map04013,map04068,map04146,map04211,map04212,map04213,map05016	-	-	-	ko00000,ko00001,ko01000	-	-	-	Sod_Fe_C,Sod_Fe_N
BYD3_k127_6262348_0	313606.M23134_06162	1.029e-268	856.0	COG0612@1|root,COG0612@2|Bacteria,4NFY0@976|Bacteroidetes,47MF6@768503|Cytophagia	976|Bacteroidetes	S	Belongs to the peptidase M16 family	pqqL	-	-	ko:K07263	-	-	-	-	ko00000,ko01000,ko01002	-	-	-	Peptidase_M16,Peptidase_M16_C
BYD3_k127_6262348_1	357808.RoseRS_1608	1.909e-78	267.0	COG2120@1|root,COG2120@2|Bacteria	2|Bacteria	S	N-acetylglucosaminylinositol deacetylase activity	-	-	-	ko:K01463	-	-	-	-	ko00000,ko01000	-	-	-	PIG-L
BYD3_k127_6262848_3	886379.AEWI01000005_gene971	4.948e-70	252.0	COG1668@1|root,COG1668@2|Bacteria,4NFSZ@976|Bacteroidetes,2FMUF@200643|Bacteroidia,3XJ77@558415|Marinilabiliaceae	976|Bacteroidetes	CP	ABC-2 family transporter protein	natB	-	-	ko:K01992	-	M00254	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	ABC2_membrane_3
BYD3_k127_6262848_1	1168289.AJKI01000011_gene563	4.247e-115	378.0	COG4152@1|root,COG4152@2|Bacteria,4NEJE@976|Bacteroidetes,2FMK3@200643|Bacteroidia,3XJS6@558415|Marinilabiliaceae	976|Bacteroidetes	S	Domain of unknown function (DUF4162)	natA	-	-	ko:K01990	-	M00254	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	ABC_tran,DUF4162
BYD3_k127_6262848_0	742817.HMPREF9449_02642	1.07e-163	522.0	COG0484@1|root,COG0484@2|Bacteria,4NF41@976|Bacteroidetes,2FPHH@200643|Bacteroidia,22WBJ@171551|Porphyromonadaceae	976|Bacteroidetes	O	ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins	dnaJ	-	-	ko:K03686	-	-	-	-	ko00000,ko03029,ko03110	-	-	-	DnaJ,DnaJ_C,DnaJ_CXXCXGXG
BYD3_k127_6262848_5	1408473.JHXO01000006_gene1269	2.527e-48	181.0	COG0576@1|root,COG0576@2|Bacteria,4NQ6M@976|Bacteroidetes,2FPIN@200643|Bacteroidia	976|Bacteroidetes	O	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ	grpE	GO:0000166,GO:0000774,GO:0003674,GO:0005488,GO:0005515,GO:0008150,GO:0017076,GO:0030234,GO:0030554,GO:0036094,GO:0050790,GO:0051082,GO:0060589,GO:0060590,GO:0065007,GO:0065009,GO:0097159,GO:0098772,GO:1901265,GO:1901363	-	ko:K03687	-	-	-	-	ko00000,ko03029,ko03110	-	-	-	GrpE
BYD3_k127_6262848_4	869213.JCM21142_93878	5.079e-54	197.0	COG0526@1|root,COG0526@2|Bacteria,4NEX3@976|Bacteroidetes,47JZP@768503|Cytophagia	976|Bacteroidetes	O	PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen	ccmG	-	-	-	-	-	-	-	-	-	-	-	AhpC-TSA,DUF4369
BYD3_k127_6262848_2	925409.KI911562_gene1594	2.83e-90	304.0	COG1472@1|root,COG1472@2|Bacteria,4NE90@976|Bacteroidetes,1IVNE@117747|Sphingobacteriia	976|Bacteroidetes	G	Glycosyl hydrolase family 3 C-terminal domain	-	-	3.2.1.21	ko:K05349	ko00460,ko00500,ko00940,ko01100,ko01110,map00460,map00500,map00940,map01100,map01110	-	R00026,R02558,R02887,R02985,R03527,R04949,R04998,R10035,R10039,R10040	RC00049,RC00059,RC00171,RC00262,RC00397,RC00451,RC00714,RC00746,RC01248	ko00000,ko00001,ko01000	-	GH3	-	F5_F8_type_C,Glyco_hydro_3,Glyco_hydro_3_C,fn3
BYD3_k127_6297286_6	927658.AJUM01000037_gene1993	1.563e-21	99.0	COG2203@1|root,COG3829@1|root,COG2203@2|Bacteria,COG3829@2|Bacteria,4NICW@976|Bacteroidetes,2G24S@200643|Bacteroidia,3XJSA@558415|Marinilabiliaceae	976|Bacteroidetes	T	Domain present in phytochromes and cGMP-specific phosphodiesterases.	-	-	-	-	-	-	-	-	-	-	-	-	GAF_2,PAS_9
BYD3_k127_6297286_0	869213.JCM21142_41446	1.124e-85	304.0	COG0642@1|root,COG2205@2|Bacteria,4NDXU@976|Bacteroidetes	976|Bacteroidetes	T	Histidine kinase	-	-	-	-	-	-	-	-	-	-	-	-	HATPase_c,HisKA,Response_reg
BYD3_k127_6297286_1	411901.BACCAC_01656	9.92e-72	246.0	COG0386@1|root,COG0386@2|Bacteria,4NM6G@976|Bacteroidetes,2FQY1@200643|Bacteroidia,4AQ9D@815|Bacteroidaceae	976|Bacteroidetes	O	Belongs to the glutathione peroxidase family	bsaA	-	1.11.1.9	ko:K00432	ko00480,ko00590,ko04918,map00480,map00590,map04918	-	R00274,R07034,R07035	RC00011,RC00982	ko00000,ko00001,ko01000	-	-	-	GSHPx
BYD3_k127_6297286_5	1358423.N180_14235	1.273e-23	103.0	COG1254@1|root,COG1254@2|Bacteria,4NVB4@976|Bacteroidetes,1ITWQ@117747|Sphingobacteriia	976|Bacteroidetes	C	Belongs to the acylphosphatase family	acyP	-	3.6.1.7	ko:K01512	ko00620,ko00627,ko01120,map00620,map00627,map01120	-	R00317,R01421,R01515	RC00043	ko00000,ko00001,ko01000	-	-	-	Acylphosphatase
BYD3_k127_6297286_4	1288963.ADIS_3489	1.255e-32	130.0	2E3B3@1|root,32X8G@2|Bacteria,4NTW7@976|Bacteroidetes	976|Bacteroidetes	S	Protein of Unknown function (DUF2784)	-	-	-	-	-	-	-	-	-	-	-	-	DUF2784
BYD3_k127_6297286_2	509635.N824_03550	1.342e-54	201.0	COG0457@1|root,COG3103@1|root,COG0457@2|Bacteria,COG3103@2|Bacteria,4NF5V@976|Bacteroidetes,1ITG5@117747|Sphingobacteriia	976|Bacteroidetes	T	tetratricopeptide repeat	batE	-	-	-	-	-	-	-	-	-	-	-	SH3_3,SH3_4,TPR_1,TPR_11,TPR_16,TPR_2
BYD3_k127_6297286_3	886379.AEWI01000062_gene2294	4.248e-47	177.0	COG0457@1|root,COG0457@2|Bacteria,4NERG@976|Bacteroidetes,2FMK5@200643|Bacteroidia,3XJ91@558415|Marinilabiliaceae	976|Bacteroidetes	S	Oxygen tolerance	batD	-	-	-	-	-	-	-	-	-	-	-	BatD
BYD3_k127_6311642_3	470145.BACCOP_00836	4.155e-75	259.0	COG0130@1|root,COG0130@2|Bacteria,4NESK@976|Bacteroidetes,2FMTY@200643|Bacteroidia,4AMPF@815|Bacteroidaceae	976|Bacteroidetes	J	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs	truB	GO:0001522,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016071,GO:0016556,GO:0016853,GO:0016866,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:1901360,GO:1990481	5.4.99.25	ko:K03177	-	-	-	-	ko00000,ko01000,ko03016	-	-	-	TruB_C_2,TruB_N
BYD3_k127_6311642_2	886379.AEWI01000014_gene1481	3.949e-182	574.0	COG0809@1|root,COG0809@2|Bacteria,4NF2T@976|Bacteroidetes,2FMFT@200643|Bacteroidia,3XJMG@558415|Marinilabiliaceae	976|Bacteroidetes	J	Queuosine biosynthesis protein	queA	-	2.4.99.17	ko:K07568	-	-	-	-	ko00000,ko01000,ko03016	-	-	-	Queuosine_synth
BYD3_k127_6311642_4	1168034.FH5T_08985	2.393e-58	207.0	COG2094@1|root,COG2094@2|Bacteria,4NP22@976|Bacteroidetes,2FSNQ@200643|Bacteroidia	976|Bacteroidetes	L	Methylpurine-DNA glycosylase (MPG)	mpg	-	3.2.2.21	ko:K03652	ko03410,map03410	-	-	-	ko00000,ko00001,ko01000,ko03400	-	-	-	Pur_DNA_glyco
BYD3_k127_6311642_1	1408473.JHXO01000010_gene3591	1.753e-262	830.0	COG4953@1|root,COG4953@2|Bacteria,4NEG5@976|Bacteroidetes,2FNUH@200643|Bacteroidia	976|Bacteroidetes	M	penicillin-binding protein	pbpC	-	2.4.1.129	ko:K05367	ko00550,map00550	-	-	-	ko00000,ko00001,ko01000,ko01003,ko01011	-	GT51	-	BiPBP_C,Transgly,Transpeptidase
BYD3_k127_6311642_5	1434325.AZQN01000003_gene1953	2.814e-35	137.0	COG0023@1|root,COG0023@2|Bacteria,4NS6M@976|Bacteroidetes,47R38@768503|Cytophagia	976|Bacteroidetes	J	PFAM translation initiation factor SUI1	-	-	-	ko:K03113	ko03013,map03013	-	-	-	ko00000,ko00001,ko03012	-	-	-	SUI1
BYD3_k127_6311642_0	1121129.KB903359_gene2350	6.514e-308	965.0	COG0038@1|root,COG0038@2|Bacteria,4NZYS@976|Bacteroidetes,2G0DB@200643|Bacteroidia,2326J@171551|Porphyromonadaceae	976|Bacteroidetes	P	Protein of unknown function (DUF2723)	-	-	-	-	-	-	-	-	-	-	-	-	DUF2723
BYD3_k127_634059_0	762903.Pedsa_3291	7.174e-148	471.0	COG0114@1|root,COG0114@2|Bacteria,4NEQP@976|Bacteroidetes,1IPCY@117747|Sphingobacteriia	976|Bacteroidetes	C	Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate	fumC	-	4.2.1.2	ko:K01679	ko00020,ko00620,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko04934,ko05200,ko05211,map00020,map00620,map00720,map01100,map01110,map01120,map01130,map01200,map04934,map05200,map05211	M00009,M00011,M00173,M00376	R01082	RC00443	ko00000,ko00001,ko00002,ko01000	-	-	-	FumaraseC_C,Lyase_1
BYD3_k127_634059_1	886379.AEWI01000005_gene912	1.456e-146	471.0	COG1186@1|root,COG1186@2|Bacteria,4NEN1@976|Bacteroidetes,2FMZK@200643|Bacteroidia,3XJKW@558415|Marinilabiliaceae	976|Bacteroidetes	J	PCRF	prfB	-	-	ko:K02836	-	-	-	-	ko00000,ko03012	-	-	-	PCRF,RF-1
BYD3_k127_634059_4	385682.AFSL01000024_gene2039	6.38e-28	118.0	COG2137@1|root,COG2137@2|Bacteria,4NSAS@976|Bacteroidetes,2FS4X@200643|Bacteroidia,3XK70@558415|Marinilabiliaceae	976|Bacteroidetes	S	RecX family	recX	-	-	ko:K03565	-	-	-	-	ko00000,ko03400	-	-	-	RecX
BYD3_k127_634059_3	1120951.AUBG01000016_gene3515	9.604e-80	274.0	COG2890@1|root,COG2890@2|Bacteria,4NDZB@976|Bacteroidetes,1HXBN@117743|Flavobacteriia	976|Bacteroidetes	J	Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif	prmC	GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0008152,GO:0008168,GO:0008757,GO:0016740,GO:0016741,GO:0032259,GO:0044424,GO:0044444,GO:0044464	2.1.1.297	ko:K02493	-	-	R10806	RC00003,RC03279	ko00000,ko01000,ko03012	-	-	-	MTS
BYD3_k127_634059_2	376686.Fjoh_0001	4.155e-116	384.0	COG0117@1|root,COG1985@1|root,COG0117@2|Bacteria,COG1985@2|Bacteria,4NFJE@976|Bacteroidetes,1HX8D@117743|Flavobacteriia,2NTFW@237|Flavobacterium	976|Bacteroidetes	H	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate	ribD	-	1.1.1.193,3.5.4.26	ko:K11752	ko00740,ko01100,ko01110,ko02024,map00740,map01100,map01110,map02024	M00125	R03458,R03459	RC00204,RC00933	ko00000,ko00001,ko00002,ko01000	-	-	-	RibD_C,dCMP_cyt_deam_1
BYD3_k127_634059_5	234267.Acid_4673	0.0002926	46.0	COG0457@1|root,COG0457@2|Bacteria	234267.Acid_4673|-	S	peptidyl-tyrosine sulfation	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_6359253_2	1168034.FH5T_09790	4.268e-225	704.0	COG0843@1|root,COG0843@2|Bacteria,4NEH8@976|Bacteroidetes,2FXCG@200643|Bacteroidia	976|Bacteroidetes	C	Belongs to the heme-copper respiratory oxidase family	coxN	-	1.9.3.1	ko:K02274	ko00190,ko01100,map00190,map01100	M00155	R00081	RC00016	ko00000,ko00001,ko00002,ko01000	3.D.4.2,3.D.4.3,3.D.4.4,3.D.4.6	-	-	COX1
BYD3_k127_6359253_8	1168034.FH5T_09785	6.941e-86	291.0	COG1999@1|root,COG1999@2|Bacteria,4NU1J@976|Bacteroidetes,2FXFP@200643|Bacteroidia	976|Bacteroidetes	S	signal sequence binding	-	-	-	ko:K07152	-	-	-	-	ko00000,ko03029	-	-	-	SCO1-SenC
BYD3_k127_6359253_18	1232437.KL661971_gene4836	1.32e-09	63.0	2EAMQ@1|root,334Q9@2|Bacteria,1NA2T@1224|Proteobacteria,42VC9@68525|delta/epsilon subdivisions,2WTH0@28221|Deltaproteobacteria,2MM04@213118|Desulfobacterales	28221|Deltaproteobacteria	S	Prokaryotic Cytochrome C oxidase subunit IV	-	-	1.9.3.1	ko:K02277	ko00190,ko01100,map00190,map01100	M00155	-	-	ko00000,ko00001,ko00002,ko01000	3.D.4.4	-	-	COX4_pro
BYD3_k127_6359253_9	869213.JCM21142_31223	3.572e-75	257.0	COG1845@1|root,COG1845@2|Bacteria,4NMCB@976|Bacteroidetes,47S6P@768503|Cytophagia	976|Bacteroidetes	C	Cytochrome c oxidase subunit III	-	-	-	ko:K02164	-	-	R00294	RC02794	ko00000	3.D.4.10	-	-	COX3
BYD3_k127_6359253_12	1168034.FH5T_05175	6.391e-42	160.0	COG2010@1|root,COG2010@2|Bacteria,4NKQI@976|Bacteroidetes	976|Bacteroidetes	C	Cytochrome C	actE	-	-	-	-	-	-	-	-	-	-	-	Cytochrome_CBB3
BYD3_k127_6359253_4	869213.JCM21142_268	5.211e-107	359.0	COG4531@1|root,COG4531@2|Bacteria,4NF0R@976|Bacteroidetes,47JUF@768503|Cytophagia	976|Bacteroidetes	P	Quinol cytochrome c oxidoreductase	actF	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_6359253_11	869213.JCM21142_267	1.588e-42	162.0	COG2010@1|root,COG2010@2|Bacteria,4NEX9@976|Bacteroidetes,47K4U@768503|Cytophagia	976|Bacteroidetes	C	Quinol cytochrome c oxidoreductase membrane protein	actD	-	-	-	-	-	-	-	-	-	-	-	DUF3341
BYD3_k127_6359253_3	869213.JCM21142_266	2.817e-219	687.0	COG5557@1|root,COG5557@2|Bacteria,4NE3X@976|Bacteroidetes,47K18@768503|Cytophagia	976|Bacteroidetes	C	PFAM Polysulphide reductase, NrfD	nrfD	-	-	ko:K00185	-	-	-	-	ko00000	5.A.3	-	-	NrfD
BYD3_k127_6359253_0	1168034.FH5T_05160	4.492e-315	993.0	COG0437@1|root,COG0437@2|Bacteria,4NE5M@976|Bacteroidetes	976|Bacteroidetes	C	Quinol cytochrome c oxidoreductase	nrfC	-	-	ko:K00184	-	-	-	-	ko00000	5.A.3	-	-	Fer4_7,Molydop_binding
BYD3_k127_6359253_7	1168034.FH5T_05155	6.031e-91	314.0	COG3474@1|root,COG3474@2|Bacteria,4PKQA@976|Bacteroidetes	976|Bacteroidetes	C	Quinol cytochrome c oxidoreductase	-	-	-	-	-	-	-	-	-	-	-	-	Cytochrom_C,Cytochrom_CIII,Cytochrome_C7
BYD3_k127_6359253_17	655815.ZPR_0673	7.749e-10	64.0	COG2207@1|root,COG2207@2|Bacteria,4NM5G@976|Bacteroidetes,1I18C@117743|Flavobacteriia	976|Bacteroidetes	K	AraC family	-	-	-	-	-	-	-	-	-	-	-	-	HTH_18
BYD3_k127_6359253_5	1111730.ATTM01000006_gene2541	1.048e-102	339.0	COG0767@1|root,COG0767@2|Bacteria,4NF7X@976|Bacteroidetes,1HX62@117743|Flavobacteriia,2NSJ5@237|Flavobacterium	976|Bacteroidetes	Q	Belongs to the MlaE permease family	-	-	-	ko:K02066	ko02010,map02010	M00210,M00669,M00670	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.27	-	-	MlaE
BYD3_k127_6359253_6	1408473.JHXO01000008_gene2659	2.158e-94	316.0	COG1127@1|root,COG1127@2|Bacteria,4NETJ@976|Bacteroidetes,2FS5X@200643|Bacteroidia	976|Bacteroidetes	Q	ABC transporter	-	-	-	-	-	-	-	-	-	-	-	-	ABC_tran
BYD3_k127_6359253_10	1121897.AUGO01000014_gene3428	9.402e-75	258.0	COG1463@1|root,COG1463@2|Bacteria,4NGHE@976|Bacteroidetes,1HWJW@117743|Flavobacteriia,2NUF3@237|Flavobacterium	976|Bacteroidetes	Q	MlaD protein	-	-	-	ko:K02067	ko02010,map02010	M00210,M00669,M00670	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.27	-	-	MlaD
BYD3_k127_6359253_13	926549.KI421517_gene4115	9.116e-29	117.0	2E3Q4@1|root,32YN3@2|Bacteria,4NVYD@976|Bacteroidetes,47RSR@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_6359253_1	272134.KB731324_gene3214	2.254e-241	762.0	COG0823@1|root,COG1506@1|root,COG0823@2|Bacteria,COG1506@2|Bacteria,1G1Q1@1117|Cyanobacteria,1H8JB@1150|Oscillatoriales	1117|Cyanobacteria	E	PFAM Prolyl oligopeptidase family	-	-	-	-	-	-	-	-	-	-	-	-	DUF3471,PD40,Peptidase_S9,Peptidase_S9_N
BYD3_k127_6359253_16	382464.ABSI01000011_gene3026	3.212e-14	79.0	COG0262@1|root,COG0262@2|Bacteria	2|Bacteria	H	dihydrofolate reductase activity	FolA	-	-	-	-	-	-	-	-	-	-	-	RibD_C
BYD3_k127_6359253_14	192952.MM_2277	7.802e-28	128.0	arCOG02349@1|root,arCOG02350@1|root,arCOG02349@2157|Archaea,arCOG02350@2157|Archaea,2Y7NM@28890|Euryarchaeota,2NBKN@224756|Methanomicrobia	224756|Methanomicrobia	T	Histidine kinase	-	-	-	-	-	-	-	-	-	-	-	-	HATPase_c,HisKA_2,MEDS,PAS_3,PAS_4,PAS_9
BYD3_k127_6359253_19	1232437.KL661978_gene3771	9.542e-07	61.0	COG4585@1|root,COG4585@2|Bacteria	2|Bacteria	T	Histidine kinase	-	-	-	ko:K03406,ko:K21470	ko02020,ko02030,map02020,map02030	-	-	-	ko00000,ko00001,ko01002,ko01011,ko02035	-	-	-	HATPase_c,HisKA_3,HisKA_7TM,PG_binding_1,YkuD,dCache_1
BYD3_k127_6359253_15	56780.SYN_01954	7.98e-18	96.0	COG4585@1|root,COG4585@2|Bacteria,1MWPN@1224|Proteobacteria,42RUN@68525|delta/epsilon subdivisions,2WNJZ@28221|Deltaproteobacteria,2MR4S@213462|Syntrophobacterales	28221|Deltaproteobacteria	T	Histidine kinase	-	-	-	-	-	-	-	-	-	-	-	-	CHASE4,HAMP,HATPase_c,HisKA_3,PAS_3,PAS_4,PAS_9
BYD3_k127_6401888_6	983548.Krodi_2066	1.256e-30	124.0	COG1696@1|root,COG1696@2|Bacteria,4NFK5@976|Bacteroidetes,1HWM1@117743|Flavobacteriia	976|Bacteroidetes	M	Membrane protein involved in D-alanine export	-	-	-	-	-	-	-	-	-	-	-	-	MBOAT
BYD3_k127_6401888_7	649349.Lbys_0689	2.296e-30	128.0	COG2197@1|root,COG2197@2|Bacteria,4NQVA@976|Bacteroidetes,47QIT@768503|Cytophagia	976|Bacteroidetes	K	Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain	-	-	-	-	-	-	-	-	-	-	-	-	GerE,Response_reg
BYD3_k127_6401888_0	886379.AEWI01000002_gene508	8.909e-295	960.0	COG0574@1|root,COG0574@2|Bacteria,4NGSQ@976|Bacteroidetes,2FM60@200643|Bacteroidia,3XJKN@558415|Marinilabiliaceae	976|Bacteroidetes	G	Pyruvate phosphate dikinase, PEP/pyruvate binding domain	-	-	-	-	-	-	-	-	-	-	-	-	PPDK_N
BYD3_k127_6401888_5	304371.MCP_1677	1.199e-42	182.0	COG0642@1|root,COG2202@1|root,arCOG02366@1|root,arCOG02366@2157|Archaea,arCOG06192@2157|Archaea,arCOG06918@2157|Archaea	2157|Archaea	T	Pas domain	ark3	-	2.1.1.80,3.1.1.61	ko:K13924	ko02020,ko02030,map02020,map02030	M00506	-	-	ko00000,ko00001,ko00002,ko01000,ko02022,ko02035	-	-	-	GAF_2,HATPase_c,HisKA,HisKA_2,MCPsignal,PAS,PAS_4,PAS_8,PAS_9,Response_reg
BYD3_k127_6401888_1	742817.HMPREF9449_00282	2.018e-205	649.0	COG0493@1|root,COG0493@2|Bacteria,4NG9R@976|Bacteroidetes,2FMJF@200643|Bacteroidia,22XDN@171551|Porphyromonadaceae	976|Bacteroidetes	E	catalyzes the conversion of pyrimidines to 5,6-dihydro compounds in pyrimidine degradation	gltA	-	1.3.1.1,1.4.1.13,1.4.1.14	ko:K00266,ko:K17722	ko00240,ko00250,ko00410,ko00770,ko00910,ko01100,ko01110,ko01120,ko01130,ko01230,map00240,map00250,map00410,map00770,map00910,map01100,map01110,map01120,map01130,map01230	M00046	R00093,R00114,R00248,R00977,R01414,R11026	RC00006,RC00010,RC00072,RC00123,RC02799	ko00000,ko00001,ko00002,ko01000	-	-	-	DHODB_Fe-S_bind,FAD_binding_6,Fer4_20,NAD_binding_1,Pyr_redox_2
BYD3_k127_6401888_4	111105.HR09_02035	1.434e-120	392.0	COG0543@1|root,COG0543@2|Bacteria,4NJ0I@976|Bacteroidetes,2FNBW@200643|Bacteroidia,22WH8@171551|Porphyromonadaceae	976|Bacteroidetes	C	Ferredoxin-NADP reductase	gltD	-	1.18.1.2,1.19.1.1	ko:K00528	-	-	R10159	-	ko00000,ko01000	-	-	-	DHODB_Fe-S_bind,FAD_binding_6,NAD_binding_1
BYD3_k127_6401888_3	382464.ABSI01000007_gene4194	1.247e-156	503.0	COG4124@1|root,COG4124@2|Bacteria	2|Bacteria	G	Belongs to the glycosyl hydrolase 26 family	-	-	-	-	-	-	-	-	-	-	-	-	Glyco_hydro_26
BYD3_k127_6401888_2	595494.Tola_2337	3.585e-185	587.0	COG1055@1|root,COG1055@2|Bacteria	2|Bacteria	P	arsenite transmembrane transporter activity	-	-	-	-	-	-	-	-	-	-	-	-	CitMHS
BYD3_k127_641698_1	335543.Sfum_1623	2.522e-102	347.0	COG3118@1|root,COG3118@2|Bacteria,1PQ8G@1224|Proteobacteria	1224|Proteobacteria	O	ASPIC and UnbV	-	-	-	-	-	-	-	-	-	-	-	-	UnbV_ASPIC,VCBS
BYD3_k127_641698_0	861299.J421_4032	3.102e-169	546.0	COG0457@1|root,COG0457@2|Bacteria	861299.J421_4032|-	S	peptidyl-tyrosine sulfation	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_647080_3	1245469.S58_71100	3.798e-60	211.0	COG1765@1|root,COG1765@2|Bacteria,1R9XU@1224|Proteobacteria,2U6E4@28211|Alphaproteobacteria,3JSDI@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	O	OsmC-like protein	MA20_23315	-	-	-	-	-	-	-	-	-	-	-	OsmC
BYD3_k127_647080_2	1108045.GORHZ_154_00260	7.189e-113	376.0	COG2072@1|root,COG2072@2|Bacteria,2GM3S@201174|Actinobacteria,4GGGG@85026|Gordoniaceae	201174|Actinobacteria	P	Flavin-binding monooxygenase-like	-	-	-	ko:K07222	-	-	-	-	ko00000	-	-	-	Pyr_redox_3
BYD3_k127_647080_4	1168034.FH5T_02655	2.281e-33	145.0	COG3453@1|root,COG3453@2|Bacteria	2|Bacteria	J	Protein conserved in bacteria	-	-	-	-	-	-	-	-	-	-	-	-	DUF442
BYD3_k127_647080_1	886379.AEWI01000037_gene2924	2.761e-120	400.0	COG3401@1|root,COG3401@2|Bacteria,4NKNR@976|Bacteroidetes,2FX7E@200643|Bacteroidia,3XK7N@558415|Marinilabiliaceae	976|Bacteroidetes	S	FG-GAP repeat protein	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_647080_0	1121101.HMPREF1532_02809	1.974e-210	670.0	COG0488@1|root,COG0488@2|Bacteria,4NES5@976|Bacteroidetes,2FMX8@200643|Bacteroidia,4AM3P@815|Bacteroidaceae	976|Bacteroidetes	S	ABC transporter, ATP-binding protein	yfmR	-	-	ko:K15738	-	-	-	-	ko00000,ko02000	3.A.1.120.6	-	-	ABC_tran,ABC_tran_CTD,ABC_tran_Xtn
BYD3_k127_647080_5	641107.CDLVIII_4345	4.758e-11	72.0	COG0308@1|root,COG0454@1|root,COG0308@2|Bacteria,COG0456@2|Bacteria,1UI7A@1239|Firmicutes,25ECH@186801|Clostridia,36UKB@31979|Clostridiaceae	186801|Clostridia	E	acetyltransferase	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_6511225_3	742817.HMPREF9449_01660	1.247e-57	225.0	COG2911@1|root,COG2911@2|Bacteria,4NF7F@976|Bacteroidetes,2FPH8@200643|Bacteroidia,22WTX@171551|Porphyromonadaceae	976|Bacteroidetes	M	TamB, inner membrane protein subunit of TAM complex	-	-	-	-	-	-	-	-	-	-	-	-	TamB
BYD3_k127_6511225_0	679935.Alfi_1762	9.314e-146	489.0	COG0729@1|root,COG0729@2|Bacteria,4PKIK@976|Bacteroidetes,2FMMM@200643|Bacteroidia,22V51@171550|Rikenellaceae	976|Bacteroidetes	M	Surface antigen	-	-	-	-	-	-	-	-	-	-	-	-	Bac_surface_Ag
BYD3_k127_6511225_4	1168034.FH5T_03830	4.659e-13	78.0	COG2067@1|root,COG2067@2|Bacteria	2|Bacteria	I	long-chain fatty acid transporting porin activity	-	-	-	-	-	-	-	-	-	-	-	-	OMP_b-brl
BYD3_k127_6511225_1	1168034.FH5T_03825	7.128e-118	392.0	COG5276@1|root,COG5276@2|Bacteria,4NG4W@976|Bacteroidetes,2FNZ8@200643|Bacteroidia	976|Bacteroidetes	S	LVIVD repeat	-	-	-	-	-	-	-	-	-	-	-	-	LVIVD
BYD3_k127_6511225_2	999419.HMPREF1077_03332	1.122e-77	264.0	COG0524@1|root,COG0524@2|Bacteria,4NENQ@976|Bacteroidetes,2FPM3@200643|Bacteroidia,22XY8@171551|Porphyromonadaceae	976|Bacteroidetes	H	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway	rbsK	-	2.7.1.15	ko:K00852	ko00030,map00030	-	R01051,R02750	RC00002,RC00017	ko00000,ko00001,ko01000	-	-	-	PfkB
BYD3_k127_654065_2	1408473.JHXO01000011_gene3054	3.135e-14	73.0	COG0735@1|root,COG0735@2|Bacteria,4NM8S@976|Bacteroidetes,2FN4T@200643|Bacteroidia	976|Bacteroidetes	P	Belongs to the Fur family	fur	-	-	ko:K03711	-	-	-	-	ko00000,ko03000	-	-	-	FUR
BYD3_k127_654065_0	886379.AEWI01000040_gene2789	4.367e-283	887.0	COG0317@1|root,COG0317@2|Bacteria,4NESY@976|Bacteroidetes,2FMEE@200643|Bacteroidia,3XIMC@558415|Marinilabiliaceae	976|Bacteroidetes	KT	Region found in RelA / SpoT proteins	relA	-	2.7.6.5	ko:K00951	ko00230,map00230	-	R00429	RC00002,RC00078	ko00000,ko00001,ko01000	-	-	-	ACT_4,HD_4,RelA_SpoT,TGS
BYD3_k127_654065_1	1313421.JHBV01000032_gene1666	1.631e-26	124.0	COG3291@1|root,COG3291@2|Bacteria,4NUDC@976|Bacteroidetes	976|Bacteroidetes	Q	C-terminal domain of CHU protein family	-	-	-	-	-	-	-	-	-	-	-	-	CHU_C
BYD3_k127_65463_4	929556.Solca_3036	1.195e-62	216.0	COG0048@1|root,COG0048@2|Bacteria,4NM3Y@976|Bacteroidetes,1IS0J@117747|Sphingobacteriia	976|Bacteroidetes	J	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit	rpsL	GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904	-	ko:K02950	ko03010,map03010	M00178,M00179	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosom_S12_S23
BYD3_k127_65463_3	663278.Ethha_2721	2.404e-81	281.0	COG1633@1|root,COG1814@1|root,COG1633@2|Bacteria,COG1814@2|Bacteria,1UZVX@1239|Firmicutes,24BSJ@186801|Clostridia,3WMVH@541000|Ruminococcaceae	186801|Clostridia	S	VIT family	-	-	-	-	-	-	-	-	-	-	-	-	Rubrerythrin,VIT1
BYD3_k127_65463_8	1173023.KE650771_gene3245	5.481e-08	64.0	COG2267@1|root,COG2267@2|Bacteria,1G4F2@1117|Cyanobacteria,1JHUI@1189|Stigonemataceae	1117|Cyanobacteria	I	TAP-like protein	-	-	-	-	-	-	-	-	-	-	-	-	Abhydrolase_1,Abhydrolase_4
BYD3_k127_65463_7	1166018.FAES_4103	3.495e-11	74.0	28I8D@1|root,2ZBHJ@2|Bacteria,4NHI9@976|Bacteroidetes,47KUP@768503|Cytophagia	976|Bacteroidetes	S	Domain of unknown function (DUF4249)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4249
BYD3_k127_65463_0	694427.Palpr_1032	4.771e-188	619.0	COG1470@1|root,COG1629@1|root,COG1470@2|Bacteria,COG4771@2|Bacteria,4NF4B@976|Bacteroidetes,2FM7I@200643|Bacteroidia,22XCB@171551|Porphyromonadaceae	976|Bacteroidetes	P	TonB-dependent receptor plug domain	-	-	-	-	-	-	-	-	-	-	-	-	CarbopepD_reg_2,Plug,TonB_dep_Rec
BYD3_k127_65463_2	1499967.BAYZ01000009_gene5310	6.353e-96	329.0	COG0642@1|root,COG3437@1|root,COG2205@2|Bacteria,COG3437@2|Bacteria	2|Bacteria	T	response regulator, receiver	-	-	-	-	-	-	-	-	-	-	-	-	GAF_2,GGDEF,HATPase_c,HisKA,PAS,PAS_4,Response_reg
BYD3_k127_65463_1	1237149.C900_03649	3.021e-128	452.0	COG2203@1|root,COG3292@1|root,COG4191@1|root,COG2203@2|Bacteria,COG3292@2|Bacteria,COG4191@2|Bacteria,4NK8Q@976|Bacteroidetes,47M6U@768503|Cytophagia	976|Bacteroidetes	KT	PFAM Y_Y_Y domain	-	-	-	-	-	-	-	-	-	-	-	-	GAF_2,HATPase_c,HTH_18,HisKA,HisKA_2,Reg_prop,Response_reg,SpoIIE,Y_Y_Y
BYD3_k127_65463_5	153721.MYP_3027	2.205e-62	219.0	COG1201@1|root,COG1201@2|Bacteria,4NGQ0@976|Bacteroidetes,47NAU@768503|Cytophagia	976|Bacteroidetes	L	DEAD DEAH box helicase	lhr	-	-	ko:K03724	-	-	-	-	ko00000,ko01000,ko03400	-	-	-	DEAD,DEAD_assoc,Helicase_C
BYD3_k127_6589065_1	1349822.NSB1T_04790	5.821e-161	514.0	COG0131@1|root,COG0241@1|root,COG0131@2|Bacteria,COG0241@2|Bacteria,4NENP@976|Bacteroidetes,2FP1T@200643|Bacteroidia,22VYJ@171551|Porphyromonadaceae	976|Bacteroidetes	E	Histidine biosynthesis bifunctional protein HisB	hisB	GO:0000105,GO:0003674,GO:0003824,GO:0004424,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016829,GO:0016835,GO:0016836,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607	3.1.3.15,4.2.1.19	ko:K01089,ko:K01693	ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230	M00026	R03013,R03457	RC00017,RC00932	ko00000,ko00001,ko00002,ko01000	-	-	-	Hydrolase_like,IGPD,PNK3P
BYD3_k127_6589065_4	886379.AEWI01000005_gene976	1.675e-134	436.0	COG0079@1|root,COG0079@2|Bacteria,4NEDI@976|Bacteroidetes,2FMFQ@200643|Bacteroidia,3XJIR@558415|Marinilabiliaceae	976|Bacteroidetes	E	Allinase	hisC	-	2.6.1.9	ko:K00817	ko00340,ko00350,ko00360,ko00400,ko00401,ko00960,ko01100,ko01110,ko01130,ko01230,map00340,map00350,map00360,map00400,map00401,map00960,map01100,map01110,map01130,map01230	M00026	R00694,R00734,R03243	RC00006,RC00888	ko00000,ko00001,ko00002,ko01000,ko01007	-	-	-	Aminotran_1_2
BYD3_k127_6589065_0	742767.HMPREF9456_01055	9.009e-165	529.0	COG0141@1|root,COG0141@2|Bacteria,4NFPZ@976|Bacteroidetes,2FMY9@200643|Bacteroidia,22WQW@171551|Porphyromonadaceae	976|Bacteroidetes	E	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine	hisD	GO:0000105,GO:0003674,GO:0003824,GO:0004399,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0052803,GO:0055114,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607	1.1.1.23	ko:K00013	ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230	M00026	R01158,R01163,R03012	RC00099,RC00242,RC00463	ko00000,ko00001,ko00002,ko01000	-	-	-	Histidinol_dh
BYD3_k127_6589065_6	1168034.FH5T_17025	1.571e-115	378.0	COG0040@1|root,COG0040@2|Bacteria,4NDW8@976|Bacteroidetes,2FNGI@200643|Bacteroidia	976|Bacteroidetes	F	ATP phosphoribosyltransferase	hisG	GO:0000105,GO:0003674,GO:0003824,GO:0003879,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016740,GO:0016757,GO:0016763,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607	2.4.2.17	ko:K00765	ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230	M00026	R01071	RC02819,RC03200	ko00000,ko00001,ko00002,ko01000	-	-	-	HisG,HisG_C
BYD3_k127_6589065_10	643867.Ftrac_0805	9.949e-90	313.0	COG2265@1|root,COG2265@2|Bacteria,4NFP1@976|Bacteroidetes,47KB6@768503|Cytophagia	976|Bacteroidetes	J	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family	rumA	-	2.1.1.190	ko:K03215	-	-	-	-	ko00000,ko01000,ko03009	-	-	-	TRAM,tRNA_U5-meth_tr
BYD3_k127_6589065_9	1123277.KB893174_gene5927	2.906e-92	338.0	COG2972@1|root,COG3292@1|root,COG2972@2|Bacteria,COG3292@2|Bacteria,4NFZB@976|Bacteroidetes,47XEG@768503|Cytophagia	976|Bacteroidetes	T	Histidine kinase	-	-	-	-	-	-	-	-	-	-	-	-	His_kinase,Reg_prop,Y_Y_Y
BYD3_k127_6589065_14	1443665.JACA01000012_gene1277	2.789e-53	196.0	COG3279@1|root,COG3279@2|Bacteria,4NK6R@976|Bacteroidetes,1HZ8M@117743|Flavobacteriia,2YJ2S@290174|Aquimarina	976|Bacteroidetes	T	LytTr DNA-binding domain	-	-	-	ko:K02477	-	-	-	-	ko00000,ko02022	-	-	-	LytTR,Response_reg
BYD3_k127_6589065_12	1121396.KB893128_gene4400	1.179e-77	269.0	COG0716@1|root,COG0716@2|Bacteria,1N2QA@1224|Proteobacteria,42NXA@68525|delta/epsilon subdivisions,2WVEA@28221|Deltaproteobacteria,2MNGC@213118|Desulfobacterales	28221|Deltaproteobacteria	C	FMN binding	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_6589065_3	1121899.Q764_05575	2.263e-135	441.0	COG0332@1|root,COG0332@2|Bacteria,4NE5Q@976|Bacteroidetes,1HXY8@117743|Flavobacteriia,2NSJ0@237|Flavobacterium	976|Bacteroidetes	I	this condensing enzyme differs from 3-oxoacyl-(acyl carrier protein) synthase I and II in that it utilizes CoA thioesters as primers rather than acyl-ACPs	darB	-	2.3.1.180	ko:K00648	ko00061,ko01100,ko01212,map00061,map01100,map01212	M00082,M00083	R10707	RC00004,RC02729,RC02888	ko00000,ko00001,ko00002,ko01000,ko01004	-	-	-	ACP_syn_III_C,Thiolase_N,ketoacyl-synt
BYD3_k127_6589065_15	983544.Lacal_2077	1.404e-33	134.0	2CE7N@1|root,30Q80@2|Bacteria,4NNKP@976|Bacteroidetes,1I2K6@117743|Flavobacteriia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_6589065_5	1137281.D778_01984	4.416e-122	400.0	COG4990@1|root,COG4990@2|Bacteria,4NFZX@976|Bacteroidetes,1HXZ6@117743|Flavobacteriia	976|Bacteroidetes	S	peptidase	-	-	-	-	-	-	-	-	-	-	-	-	BtrH_N,DUF4872
BYD3_k127_6589065_11	376686.Fjoh_1096	3.819e-87	295.0	COG1131@1|root,COG1131@2|Bacteria,4NFW9@976|Bacteroidetes,1HZ6V@117743|Flavobacteriia,2NU6F@237|Flavobacterium	976|Bacteroidetes	V	Multidrug ABC transporter ATPase	-	-	-	ko:K01990	-	M00254	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	ABC_tran
BYD3_k127_6589065_8	203275.BFO_1827	7.43e-99	337.0	COG0842@1|root,COG0842@2|Bacteria,4NGFA@976|Bacteroidetes	976|Bacteroidetes	V	Transporter	-	-	-	ko:K01992	-	M00254	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	ABC2_membrane_3
BYD3_k127_6589065_17	313590.MED134_12006	6.521e-20	98.0	2E4M0@1|root,32ZFZ@2|Bacteria,4NW62@976|Bacteroidetes,1I5TT@117743|Flavobacteriia,37EZC@326319|Dokdonia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_6589065_16	767031.HMPREF9137_2065	8.499e-23	100.0	COG0236@1|root,COG0236@2|Bacteria,4NSFU@976|Bacteroidetes,2FTE9@200643|Bacteroidia	976|Bacteroidetes	IQ	acyl carrier protein	acpP2	-	-	ko:K02078	-	-	-	-	ko00000,ko00001	-	-	-	PP-binding
BYD3_k127_6589065_7	1550091.JROE01000010_gene3144	9.154e-115	382.0	COG0304@1|root,COG0304@2|Bacteria,4NFC8@976|Bacteroidetes,1IRGP@117747|Sphingobacteriia	976|Bacteroidetes	IQ	Belongs to the beta-ketoacyl-ACP synthases family	-	-	2.3.1.41	ko:K00647	ko00061,ko00780,ko01100,ko01212,map00061,map00780,map01100,map01212	M00083,M00572	R04355,R04726,R04952,R04957,R04960,R04963,R04968,R07762,R10115,R10119	RC00039,RC02728,RC02729,RC02888	ko00000,ko00001,ko00002,ko01000,ko01004	-	-	-	Ketoacyl-synt_C,ketoacyl-synt
BYD3_k127_6589065_13	485918.Cpin_1867	1.301e-72	258.0	COG0304@1|root,COG0304@2|Bacteria,4NEU6@976|Bacteroidetes,1ISE9@117747|Sphingobacteriia	976|Bacteroidetes	IQ	Beta-ketoacyl synthase, N-terminal domain	-	-	-	-	-	-	-	-	-	-	-	-	Ketoacyl-synt_2,ketoacyl-synt
BYD3_k127_6589065_2	153721.MYP_4273	1.447e-135	447.0	COG1233@1|root,COG1233@2|Bacteria,4NG5Y@976|Bacteroidetes,47K5X@768503|Cytophagia	976|Bacteroidetes	Q	Flavin containing amine oxidoreductase	-	-	1.3.99.23	ko:K09516	ko00830,map00830	-	R07163	RC01835	ko00000,ko00001,ko01000	-	-	-	Amino_oxidase,NAD_binding_8
BYD3_k127_659056_10	485917.Phep_3068	1.67e-37	147.0	28HQ3@1|root,2Z7XW@2|Bacteria,4NF9H@976|Bacteroidetes,1INN1@117747|Sphingobacteriia	976|Bacteroidetes	S	Protein of unknown function (DUF2851)	-	-	-	-	-	-	-	-	-	-	-	-	DUF2851
BYD3_k127_659056_3	1410608.JNKX01000019_gene2779	2.36e-109	359.0	COG0284@1|root,COG0284@2|Bacteria,4NE12@976|Bacteroidetes,2FPJM@200643|Bacteroidia,4AKFN@815|Bacteroidaceae	976|Bacteroidetes	F	Belongs to the OMP decarboxylase family. Type 2 subfamily	pyrF	GO:0003674,GO:0003824,GO:0004590,GO:0006139,GO:0006206,GO:0006207,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009112,GO:0009987,GO:0016829,GO:0016830,GO:0016831,GO:0018130,GO:0019856,GO:0034641,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046112,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576	4.1.1.23	ko:K01591	ko00240,ko01100,map00240,map01100	M00051	R00965	RC00409	ko00000,ko00001,ko00002,ko01000	-	-	-	OMPdecase
BYD3_k127_659056_1	385682.AFSL01000062_gene1600	1.039e-168	536.0	COG0216@1|root,COG0216@2|Bacteria,4NF72@976|Bacteroidetes,2FNKW@200643|Bacteroidia,3XJM7@558415|Marinilabiliaceae	976|Bacteroidetes	J	PCRF	prfA	-	-	ko:K02835	-	-	-	-	ko00000,ko03012	-	-	-	PCRF,RF-1
BYD3_k127_659056_0	1408473.JHXO01000006_gene1038	3.313e-178	565.0	COG0150@1|root,COG0150@2|Bacteria,4NE4E@976|Bacteroidetes,2FM0G@200643|Bacteroidia	976|Bacteroidetes	F	Phosphoribosylformylglycinamidine cyclo-ligase	purM	-	6.3.3.1	ko:K01933	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	M00048	R04208	RC01100	ko00000,ko00001,ko00002,ko01000	-	-	-	AIRS,AIRS_C
BYD3_k127_659056_8	927658.AJUM01000017_gene3118	1.876e-54	195.0	COG1595@1|root,COG1595@2|Bacteria,4NMM3@976|Bacteroidetes,2FNH5@200643|Bacteroidia,3XJ3Z@558415|Marinilabiliaceae	976|Bacteroidetes	K	ECF sigma factor	sigR_3	-	-	ko:K03088	-	-	-	-	ko00000,ko03021	-	-	-	Sigma70_r2,Sigma70_r4_2
BYD3_k127_659056_6	1237149.C900_03623	3.649e-85	291.0	COG0789@1|root,COG0789@2|Bacteria,4NERC@976|Bacteroidetes,47K07@768503|Cytophagia	976|Bacteroidetes	K	PFAM MerR family regulatory protein	-	-	-	ko:K22491	-	-	-	-	ko00000,ko03000	-	-	-	B12-binding,B12-binding_2,MerR_1
BYD3_k127_659056_7	1349822.NSB1T_00190	1.402e-68	240.0	COG4122@1|root,COG4122@2|Bacteria,4NH42@976|Bacteroidetes,2FM5S@200643|Bacteroidia,22WC1@171551|Porphyromonadaceae	976|Bacteroidetes	S	O-Methyltransferase	mdmC	-	2.1.1.104	ko:K00588	ko00360,ko00940,ko00941,ko00945,ko01100,ko01110,map00360,map00940,map00941,map00945,map01100,map01110	M00039,M00350	R01942,R06578	RC00003,RC00392	ko00000,ko00001,ko00002,ko01000	-	-	-	Methyltransf_3
BYD3_k127_659056_2	1408473.JHXO01000006_gene1013	1.911e-144	469.0	COG0612@1|root,COG0612@2|Bacteria,4NEE4@976|Bacteroidetes,2FN50@200643|Bacteroidia	976|Bacteroidetes	S	Belongs to the peptidase M16 family	-	-	-	-	-	-	-	-	-	-	-	-	Peptidase_M16,Peptidase_M16_C
BYD3_k127_659056_11	1380600.AUYN01000006_gene320	5.352e-07	53.0	2DR32@1|root,339YJ@2|Bacteria,4NYM3@976|Bacteroidetes,1I6CH@117743|Flavobacteriia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_659056_4	987059.RBXJA2T_08138	1.13e-90	312.0	COG4992@1|root,COG4992@2|Bacteria	2|Bacteria	E	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity	patA	GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006576,GO:0006595,GO:0006598,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008483,GO:0009056,GO:0009058,GO:0009308,GO:0009310,GO:0009445,GO:0009447,GO:0009987,GO:0016740,GO:0016769,GO:0016999,GO:0017000,GO:0017144,GO:0019842,GO:0030170,GO:0033094,GO:0034641,GO:0036094,GO:0042402,GO:0042802,GO:0043167,GO:0043168,GO:0043169,GO:0044106,GO:0044237,GO:0044249,GO:0044424,GO:0044444,GO:0044464,GO:0048037,GO:0050662,GO:0070279,GO:0070280,GO:0071704,GO:0097159,GO:0097164,GO:1901363,GO:1901564,GO:1901565,GO:1901575	2.6.1.11,2.6.1.13,2.6.1.17,2.6.1.82	ko:K00819,ko:K00821,ko:K05830,ko:K09251,ko:K21778	ko00220,ko00300,ko00330,ko00333,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00220,map00300,map00330,map00333,map01100,map01110,map01120,map01130,map01210,map01230	M00016,M00028,M00031,M00763,M00837,M00845	R00667,R01155,R02283,R04475,R09778,R10932,R11672	RC00006,RC00062	ko00000,ko00001,ko00002,ko01000,ko01007	-	-	iECIAI1_1343.ECIAI1_3220,iECSF_1327.ECSF_2916,iECs_1301.ECs3955,iZ_1308.Z4426	Aminotran_3
BYD3_k127_659056_9	1408422.JHYF01000010_gene3300	4.875e-45	176.0	COG2267@1|root,COG2267@2|Bacteria,1V0IY@1239|Firmicutes,24BEP@186801|Clostridia,36E65@31979|Clostridiaceae	186801|Clostridia	I	Alpha beta	-	-	-	-	-	-	-	-	-	-	-	-	Abhydrolase_1,Hydrolase_4
BYD3_k127_659056_5	1291050.JAGE01000001_gene1266	1.455e-89	312.0	COG4447@1|root,COG4447@2|Bacteria,1UU3Y@1239|Firmicutes,24C6F@186801|Clostridia,3WMYB@541000|Ruminococcaceae	186801|Clostridia	S	cellulose binding	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_6594913_1	1086011.HJ01_02359	2.296e-11	74.0	COG0265@1|root,COG0265@2|Bacteria	2|Bacteria	O	serine-type endopeptidase activity	-	-	3.4.21.107	ko:K04771	ko01503,ko02020,map01503,map02020	M00728	-	-	ko00000,ko00001,ko00002,ko01000,ko01002,ko03110	-	-	-	PDZ_2,Trypsin_2
BYD3_k127_6594913_0	694427.Palpr_0316	2.441e-185	593.0	COG2091@1|root,COG2091@2|Bacteria,4NFQ6@976|Bacteroidetes,2FS4M@200643|Bacteroidia,2309R@171551|Porphyromonadaceae	976|Bacteroidetes	H	lysine biosynthetic process via aminoadipic acid	-	-	-	-	-	-	-	-	-	-	-	-	CBM9_1
BYD3_k127_6651305_6	86416.Clopa_0410	9.175e-09	56.0	COG0253@1|root,COG0253@2|Bacteria,1TPMN@1239|Firmicutes,24AGY@186801|Clostridia,36EBG@31979|Clostridiaceae	186801|Clostridia	E	Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan	dapF	-	5.1.1.7	ko:K01778	ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00300,map01100,map01110,map01120,map01130,map01230	M00016,M00525,M00527	R02735	RC00302	ko00000,ko00001,ko00002,ko01000	-	-	-	DAP_epimerase
BYD3_k127_6651305_4	945713.IALB_3126	9.526e-21	103.0	COG4412@1|root,COG4412@2|Bacteria	2|Bacteria	S	peptidase activity, acting on L-amino acid peptides	ina	-	-	-	-	-	-	-	-	-	-	-	PDZ_2,Peptidase_M6
BYD3_k127_6651305_5	485914.Hmuk_2435	4.504e-10	70.0	COG3794@1|root,arCOG02921@2157|Archaea,2XT3F@28890|Euryarchaeota,23S11@183963|Halobacteria	183963|Halobacteria	C	COG3794 Plastocyanin	-	-	2.7.11.1	ko:K12132	-	-	-	-	ko00000,ko01000,ko01001	-	-	-	Copper-bind
BYD3_k127_6651305_3	714943.Mucpa_3253	3.251e-24	117.0	COG3266@1|root,COG3266@2|Bacteria,4NKN6@976|Bacteroidetes,1IT2C@117747|Sphingobacteriia	976|Bacteroidetes	S	domain, Protein	-	-	-	-	-	-	-	-	-	-	-	-	OMP_b-brl,OMP_b-brl_2
BYD3_k127_6651305_2	1122179.KB890416_gene2648	2.674e-43	164.0	COG1595@1|root,COG1595@2|Bacteria,4NKHT@976|Bacteroidetes,1ISKR@117747|Sphingobacteriia	976|Bacteroidetes	K	TIGRFAM RNA polymerase sigma factor, sigma-70 family	-	-	-	ko:K03088	-	-	-	-	ko00000,ko03021	-	-	-	Sigma70_r2,Sigma70_r4_2
BYD3_k127_6651305_1	927658.AJUM01000037_gene2196	3.209e-95	317.0	COG2738@1|root,COG2738@2|Bacteria,4NDWG@976|Bacteroidetes,2FPBQ@200643|Bacteroidia,3XJ60@558415|Marinilabiliaceae	976|Bacteroidetes	S	Putative neutral zinc metallopeptidase	-	-	-	ko:K06973	-	-	-	-	ko00000	-	-	-	Zn_peptidase_2
BYD3_k127_6651305_0	880073.Calab_2784	1.232e-117	391.0	COG1164@1|root,COG1164@2|Bacteria,2NQ8K@2323|unclassified Bacteria	2|Bacteria	E	Oligoendopeptidase f	-	-	3.4.15.1	ko:K01283	ko04614,ko04924,ko05142,ko05410,map04614,map04924,map05142,map05410	-	-	-	ko00000,ko00001,ko01000,ko01002,ko04090,ko04147	-	-	-	Peptidase_M2,Peptidase_M3
BYD3_k127_6654213_7	1122931.AUAE01000005_gene3499	7.302e-32	127.0	COG5000@1|root,COG5000@2|Bacteria,4NE49@976|Bacteroidetes,2G2UI@200643|Bacteroidia,231JX@171551|Porphyromonadaceae	976|Bacteroidetes	T	GHKL domain	zraS_1	-	-	-	-	-	-	-	-	-	-	-	HATPase_c,HisKA
BYD3_k127_6654213_0	1121904.ARBP01000007_gene3139	3.739e-306	951.0	COG0021@1|root,COG0021@2|Bacteria,4P14U@976|Bacteroidetes,47MNR@768503|Cytophagia	976|Bacteroidetes	G	Transketolase, thiamine diphosphate binding domain	tkt	-	2.2.1.1	ko:K00615	ko00030,ko00710,ko01051,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00710,map01051,map01100,map01110,map01120,map01130,map01200,map01230	M00004,M00007,M00165,M00167	R01067,R01641,R01830,R06590	RC00032,RC00226,RC00571,RC01560	ko00000,ko00001,ko00002,ko01000	-	-	-	Transket_pyr,Transketolase_C,Transketolase_N
BYD3_k127_6654213_2	929556.Solca_2348	6.295e-140	454.0	COG0012@1|root,COG0012@2|Bacteria,4NF7N@976|Bacteroidetes,1IPTY@117747|Sphingobacteriia	976|Bacteroidetes	J	ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner	ychF	-	-	ko:K06942	-	-	-	-	ko00000,ko03009	-	-	-	MMR_HSR1,YchF-GTPase_C
BYD3_k127_6654213_4	945713.IALB_1057	3.301e-105	362.0	COG2866@1|root,COG2866@2|Bacteria	2|Bacteria	E	metallocarboxypeptidase activity	-	-	3.4.17.22	ko:K06987,ko:K07752	-	-	-	-	ko00000,ko01000,ko01002	-	-	-	CarboxypepD_reg,PKD,Peptidase_M14
BYD3_k127_6654213_8	269798.CHU_1030	2.09e-05	51.0	2ETWW@1|root,33ME3@2|Bacteria,4NZRJ@976|Bacteroidetes,47X07@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_6654213_1	1168289.AJKI01000011_gene549	4.415e-204	640.0	COG4948@1|root,COG4948@2|Bacteria,4NI24@976|Bacteroidetes,2G31N@200643|Bacteroidia,3XJFT@558415|Marinilabiliaceae	976|Bacteroidetes	M	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain	-	-	4.2.1.8	ko:K08323	ko00040,ko01100,map00040,map01100	M00061	R05606	RC00543	ko00000,ko00001,ko00002,ko01000	-	-	-	MR_MLE_C,MR_MLE_N
BYD3_k127_6654213_5	509635.N824_15645	2.707e-95	320.0	COG1028@1|root,COG1028@2|Bacteria,4NIH6@976|Bacteroidetes,1IQMX@117747|Sphingobacteriia	976|Bacteroidetes	IQ	COGs COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase)	-	-	1.1.1.69	ko:K00046	-	-	-	-	ko00000,ko01000	-	-	-	adh_short_C2
BYD3_k127_6654213_3	1089547.KB913013_gene371	3.212e-117	388.0	COG1609@1|root,COG1609@2|Bacteria,4NDW6@976|Bacteroidetes,47M5M@768503|Cytophagia	976|Bacteroidetes	K	Periplasmic binding protein LacI transcriptional regulator	-	-	-	ko:K02529	-	-	-	-	ko00000,ko03000	-	-	-	LacI,Peripla_BP_1,Peripla_BP_3
BYD3_k127_6654213_6	886379.AEWI01000152_gene454	4.729e-46	169.0	COG2211@1|root,COG2211@2|Bacteria,4NE3B@976|Bacteroidetes,2FPMF@200643|Bacteroidia,3XJXR@558415|Marinilabiliaceae	976|Bacteroidetes	G	MFS/sugar transport protein	gph	-	-	ko:K03292	-	-	-	-	ko00000	2.A.2	-	-	MFS_2
BYD3_k127_6667385_0	1392498.JQLH01000001_gene309	6.117e-319	990.0	COG1629@1|root,COG4771@2|Bacteria,4NF05@976|Bacteroidetes,1HYU9@117743|Flavobacteriia,2PIWF@252356|Maribacter	976|Bacteroidetes	P	TonB-dependent Receptor Plug Domain	-	-	-	ko:K02014,ko:K16089	-	-	-	-	ko00000,ko02000	1.B.14,1.B.14.1,1.B.14.10	-	-	CarbopepD_reg_2,Plug,TonB_dep_Rec
BYD3_k127_6667385_3	760192.Halhy_5034	1.313e-30	124.0	2E5WH@1|root,30K07@2|Bacteria,4P5HE@976|Bacteroidetes	976|Bacteroidetes	J	23S rRNA-intervening sequence protein	-	-	-	-	-	-	-	-	-	-	-	-	23S_rRNA_IVP
BYD3_k127_6667385_2	1408473.JHXO01000007_gene720	1.634e-33	138.0	arCOG14808@1|root,308PC@2|Bacteria,4NR4D@976|Bacteroidetes,2FR8F@200643|Bacteroidia	976|Bacteroidetes	S	Domain of unknown function (DUF4956)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4956
BYD3_k127_6667385_1	1121904.ARBP01000012_gene1244	5.491e-59	218.0	28M5H@1|root,2ZAJ9@2|Bacteria,4NESS@976|Bacteroidetes,47NNA@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_6673265_5	860228.Ccan_00120	2.872e-35	142.0	COG0521@1|root,COG0521@2|Bacteria,4NHV5@976|Bacteroidetes,1HXT5@117743|Flavobacteriia	976|Bacteroidetes	H	Starch-binding associating with outer membrane	-	-	-	-	-	-	-	-	-	-	-	-	SusD-like,SusD-like_2
BYD3_k127_6673265_0	1121012.AUKX01000021_gene1718	2.539e-229	745.0	COG4206@1|root,COG4206@2|Bacteria,4NZWU@976|Bacteroidetes,1I86Y@117743|Flavobacteriia,23HS3@178469|Arenibacter	976|Bacteroidetes	H	TonB dependent receptor	-	-	-	-	-	-	-	-	-	-	-	-	CarbopepD_reg_2,Plug,TonB_dep_Rec
BYD3_k127_6673265_6	1245471.PCA10_27070	2.052e-33	149.0	COG0421@1|root,COG0421@2|Bacteria,1QU1A@1224|Proteobacteria,1T1KW@1236|Gammaproteobacteria	1236|Gammaproteobacteria	E	Spermine/spermidine synthase domain	-	-	-	-	-	-	-	-	-	-	-	-	Spermine_synth
BYD3_k127_6673265_2	1121129.KB903359_gene2209	1.29e-165	541.0	COG0247@1|root,COG0247@2|Bacteria,4NDZS@976|Bacteroidetes,2FRID@200643|Bacteroidia,22ZH9@171551|Porphyromonadaceae	976|Bacteroidetes	C	Cysteine-rich domain	-	-	-	-	-	-	-	-	-	-	-	-	CCG
BYD3_k127_6673265_7	445970.ALIPUT_00916	5.967e-17	87.0	COG1150@1|root,COG1150@2|Bacteria,4NTRW@976|Bacteroidetes,2FTYK@200643|Bacteroidia,22VH4@171550|Rikenellaceae	976|Bacteroidetes	C	4Fe-4S dicluster domain	-	-	-	-	-	-	-	-	-	-	-	-	Fer4_17,Fer4_7,Fer4_9
BYD3_k127_6673265_3	742817.HMPREF9449_00255	6.704e-98	331.0	COG1148@1|root,COG2072@1|root,COG1148@2|Bacteria,COG2072@2|Bacteria,4NI95@976|Bacteroidetes,2FRRV@200643|Bacteroidia,22Z3B@171551|Porphyromonadaceae	976|Bacteroidetes	CP	FAD binding domain	-	-	1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6	ko:K03388	ko00680,ko01100,ko01120,ko01200,map00680,map01100,map01120,map01200	M00356,M00357,M00563,M00567	R04540,R11928,R11931,R11943,R11944	RC00011	ko00000,ko00001,ko00002,ko01000	-	-	-	FAD_binding_2,Fer4,Fer4_7,HI0933_like,Pyr_redox_2
BYD3_k127_6673265_1	1121129.KB903359_gene2206	2.854e-171	544.0	COG2048@1|root,COG2048@2|Bacteria,4NHHH@976|Bacteroidetes,2FM47@200643|Bacteroidia,22Z84@171551|Porphyromonadaceae	976|Bacteroidetes	C	Cysteine-rich domain	-	-	1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6	ko:K03389	ko00680,ko01100,ko01120,ko01200,map00680,map01100,map01120,map01200	M00356,M00357,M00563,M00567	R04540,R11928,R11931,R11943,R11944	RC00011	ko00000,ko00001,ko00002,ko01000	-	-	-	CCG
BYD3_k127_6673265_4	742725.HMPREF9450_01008	1.968e-73	254.0	COG1150@1|root,COG1150@2|Bacteria,4NN9R@976|Bacteroidetes,2FSAS@200643|Bacteroidia,22URS@171550|Rikenellaceae	976|Bacteroidetes	C	4Fe-4S dicluster domain	-	-	1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6	ko:K03390	ko00680,ko01100,ko01120,ko01200,map00680,map01100,map01120,map01200	M00356,M00357,M00563,M00567	R04540,R11928,R11931,R11943,R11944	RC00011	ko00000,ko00001,ko00002,ko01000	-	-	-	Fer4_8
BYD3_k127_673510_5	518766.Rmar_0476	7.164e-53	196.0	COG3589@1|root,COG3589@2|Bacteria	2|Bacteria	D	Outer surface protein	yleB	-	4.2.1.126	ko:K07106,ko:K09963	ko00520,ko01100,map00520,map01100	-	R08555	RC00397,RC00746	ko00000,ko00001,ko01000	-	-	-	DUF871
BYD3_k127_673510_9	1121904.ARBP01000006_gene4028	2.604e-36	155.0	295NE@1|root,2ZSZT@2|Bacteria,4NPQK@976|Bacteroidetes	976|Bacteroidetes	S	DoxX	-	-	1.8.5.2	ko:K16937	ko00920,ko01120,map00920,map01120	-	R07177	-	ko00000,ko00001,ko01000	3.D.4.9	-	-	DoxX
BYD3_k127_673510_4	357808.RoseRS_4212	2.469e-55	220.0	COG3408@1|root,COG3408@2|Bacteria,2GBJE@200795|Chloroflexi,3758R@32061|Chloroflexia	32061|Chloroflexia	G	Glycogen debranching enzyme	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_673510_3	1123008.KB905695_gene2497	8.988e-94	328.0	COG0561@1|root,COG0561@2|Bacteria,4NJ01@976|Bacteroidetes,2FWDS@200643|Bacteroidia	976|Bacteroidetes	S	SusD family	-	-	-	-	-	-	-	-	-	-	-	-	SusD-like_3,SusD_RagB
BYD3_k127_673510_0	1123008.KB905695_gene2496	2.165e-273	880.0	COG1629@1|root,COG1629@2|Bacteria,4NDXS@976|Bacteroidetes,2FW60@200643|Bacteroidia	976|Bacteroidetes	P	TonB dependent receptor	-	-	-	-	-	-	-	-	-	-	-	-	CarbopepD_reg_2,Plug,TonB_dep_Rec
BYD3_k127_673510_6	1346330.M472_21010	1.002e-50	193.0	COG3712@1|root,COG3712@2|Bacteria,4NP2Y@976|Bacteroidetes,1ISC6@117747|Sphingobacteriia	976|Bacteroidetes	PT	Fe2 -dicitrate sensor, membrane component	-	-	-	-	-	-	-	-	-	-	-	-	DUF4974,FecR
BYD3_k127_673510_8	1235803.C825_02177	2.319e-36	144.0	COG1595@1|root,COG1595@2|Bacteria,4NVCP@976|Bacteroidetes,2FTBY@200643|Bacteroidia,22YK6@171551|Porphyromonadaceae	976|Bacteroidetes	K	Sigma-70, region 4	-	-	-	-	-	-	-	-	-	-	-	-	Sigma70_r2,Sigma70_r4_2
BYD3_k127_673510_1	926549.KI421517_gene2818	5.126e-187	594.0	COG0673@1|root,COG0673@2|Bacteria,4NG5T@976|Bacteroidetes,47MFM@768503|Cytophagia	976|Bacteroidetes	S	Putative oxidoreductase C terminal domain	-	-	-	-	-	-	-	-	-	-	-	-	GFO_IDH_MocA,Oxidoreduct_C
BYD3_k127_673510_7	504487.JCM19302_76	2.003e-36	142.0	COG0071@1|root,COG0071@2|Bacteria,4NQXY@976|Bacteroidetes,1I382@117743|Flavobacteriia	976|Bacteroidetes	O	Belongs to the small heat shock protein (HSP20) family	-	-	-	ko:K13993	ko04141,map04141	-	-	-	ko00000,ko00001,ko03110	-	-	-	HSP20
BYD3_k127_673510_2	1408473.JHXO01000005_gene1510	1.198e-186	604.0	COG4232@1|root,COG4232@2|Bacteria,4NEW6@976|Bacteroidetes,2FNDE@200643|Bacteroidia	976|Bacteroidetes	CO	cytochrome c biogenesis protein transmembrane region	dsbD	-	1.8.1.8	ko:K04084	-	-	-	-	ko00000,ko01000,ko03110	5.A.1.1	-	-	DsbC,DsbD,Thioredoxin_7
BYD3_k127_673510_10	929562.Emtol_1818	3.144e-10	63.0	COG4299@1|root,COG4299@2|Bacteria,4NGKU@976|Bacteroidetes,47M78@768503|Cytophagia	976|Bacteroidetes	S	Domain of unknown function (DUF5009)	-	-	-	-	-	-	-	-	-	-	-	-	DUF5009
BYD3_k127_6763792_3	1349822.NSB1T_13595	3.622e-61	218.0	COG3382@1|root,COG3382@2|Bacteria,4NMUG@976|Bacteroidetes,2FNY7@200643|Bacteroidia,22XQA@171551|Porphyromonadaceae	976|Bacteroidetes	S	B3/4 domain	-	-	-	-	-	-	-	-	-	-	-	-	B3_4
BYD3_k127_6763792_4	985255.APHJ01000018_gene3031	3.393e-49	183.0	COG4704@1|root,COG4704@2|Bacteria,4NUMP@976|Bacteroidetes,1I5WC@117743|Flavobacteriia	976|Bacteroidetes	S	Fibrobacter succinogenes major domain (Fib_succ_major)	-	-	-	-	-	-	-	-	-	-	-	-	BACON,Fib_succ_major
BYD3_k127_6763792_1	1408473.JHXO01000008_gene2836	7.65e-195	617.0	COG4403@1|root,COG4403@2|Bacteria,4PMC1@976|Bacteroidetes	976|Bacteroidetes	V	Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella	-	-	-	-	-	-	-	-	-	-	-	-	VCBS
BYD3_k127_6763792_0	1408473.JHXO01000008_gene2837	2.53e-249	784.0	COG0348@1|root,COG1622@1|root,COG0348@2|Bacteria,COG1622@2|Bacteria	2|Bacteria	C	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor	vnfA	-	1.9.3.1	ko:K02275	ko00190,ko01100,map00190,map01100	M00155	R00081	RC00016	ko00000,ko00001,ko00002,ko01000	3.D.4.2,3.D.4.4,3.D.4.6	-	-	Cupredoxin_1,Fer4_5,Sigma54_activat,cNMP_binding
BYD3_k127_6763792_2	1121373.KB903625_gene3184	5.736e-89	299.0	COG1028@1|root,COG1028@2|Bacteria,4NI46@976|Bacteroidetes	976|Bacteroidetes	IQ	with different specificities (related to short-chain alcohol	-	-	-	-	-	-	-	-	-	-	-	-	adh_short
BYD3_k127_6763792_5	1120934.KB894405_gene5509	1.463e-16	80.0	COG1131@1|root,COG1131@2|Bacteria,2GIY8@201174|Actinobacteria,4DXCG@85010|Pseudonocardiales	201174|Actinobacteria	V	TIGRFAM daunorubicin resistance ABC transporter ATP-binding subunit	-	-	-	ko:K01990	-	M00254	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	ABC_tran,DUF4162
BYD3_k127_6779221_6	945713.IALB_2167	1.745e-47	177.0	COG2304@1|root,COG2304@2|Bacteria	2|Bacteria	IU	oxidoreductase activity	-	-	-	-	-	-	-	-	-	-	-	-	M64_N,Peptidase_M64,VWA
BYD3_k127_6779221_5	1166018.FAES_4346	4.052e-50	187.0	28J3W@1|root,2Z900@2|Bacteria,4NG4R@976|Bacteroidetes,47NT0@768503|Cytophagia	976|Bacteroidetes	S	pfam nipsnap	-	-	-	-	-	-	-	-	-	-	-	-	NIPSNAP
BYD3_k127_6779221_1	1121930.AQXG01000001_gene1102	3.775e-154	514.0	COG2091@1|root,COG2091@2|Bacteria,4NGXG@976|Bacteroidetes	976|Bacteroidetes	H	lysine biosynthetic process via aminoadipic acid	-	-	-	-	-	-	-	-	-	-	-	-	CBM9_1
BYD3_k127_6779221_3	1121451.DESAM_22345	7.371e-82	278.0	COG2360@1|root,COG2360@2|Bacteria,1R9W8@1224|Proteobacteria,42QRC@68525|delta/epsilon subdivisions,2WMP7@28221|Deltaproteobacteria,2M9ZR@213115|Desulfovibrionales	28221|Deltaproteobacteria	O	Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine	aat	-	2.3.2.6	ko:K00684	-	-	R03813,R11443,R11444	RC00055,RC00064	ko00000,ko01000	-	-	-	Leu_Phe_trans
BYD3_k127_6779221_0	742767.HMPREF9456_01771	1.109e-211	662.0	COG2152@1|root,COG2152@2|Bacteria,4NGA2@976|Bacteroidetes,2FMJR@200643|Bacteroidia,22WMJ@171551|Porphyromonadaceae	976|Bacteroidetes	G	Converts 4-O-beta-D-mannopyranosyl-D-glucopyranose (Man- Glc) to mannose 1-phosphate (Man1P) and glucose	-	-	2.4.1.281	ko:K16212	-	-	R09943	RC00049	ko00000,ko01000	-	-	-	Glyco_hydro_130
BYD3_k127_6779221_2	1268240.ATFI01000013_gene1137	1.725e-138	451.0	COG2942@1|root,COG2942@2|Bacteria,4NEH7@976|Bacteroidetes,2FM9N@200643|Bacteroidia,4AKDF@815|Bacteroidaceae	976|Bacteroidetes	G	Catalyzes the reversible epimerization of cellobiose to 4-O-beta-D-glucopyranosyl-D-mannose (Glc-Man)	bfce	-	5.1.3.11	ko:K16213	-	-	R01445,R10810	RC00289	ko00000,ko01000	-	-	-	GlcNAc_2-epim
BYD3_k127_6779221_4	862515.HMPREF0658_1901	1.171e-59	210.0	COG0225@1|root,COG0229@1|root,COG0225@2|Bacteria,COG0229@2|Bacteria,4NMAJ@976|Bacteroidetes,2FNTE@200643|Bacteroidia	976|Bacteroidetes	O	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine	msrA	-	1.8.4.11,1.8.4.12	ko:K07304,ko:K12267	-	-	-	-	ko00000,ko01000	-	-	-	PMSR,SelR
BYD3_k127_6779221_7	686340.Metal_2156	3.735e-16	81.0	arCOG06832@1|root,31H39@2|Bacteria,1RJBH@1224|Proteobacteria,1SNXE@1236|Gammaproteobacteria,1XGIS@135618|Methylococcales	135618|Methylococcales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_678667_3	468059.AUHA01000003_gene1913	4.444e-73	254.0	COG2025@1|root,COG2025@2|Bacteria,4NFSE@976|Bacteroidetes,1IPHN@117747|Sphingobacteriia	976|Bacteroidetes	C	Electron transfer flavoprotein	etfA	-	-	ko:K03522	-	-	-	-	ko00000,ko04147	-	-	-	ETF,ETF_alpha
BYD3_k127_678667_2	153721.MYP_704	1.269e-78	269.0	COG2086@1|root,COG2086@2|Bacteria,4NFWB@976|Bacteroidetes,47KZ2@768503|Cytophagia	976|Bacteroidetes	C	Electron transfer flavoprotein	etfB	-	-	ko:K03521	-	-	-	-	ko00000	-	-	-	ETF
BYD3_k127_678667_0	886379.AEWI01000010_gene627	1.277e-133	438.0	COG2208@1|root,COG2208@2|Bacteria,4NKGH@976|Bacteroidetes,2FNHT@200643|Bacteroidia,3XJHE@558415|Marinilabiliaceae	976|Bacteroidetes	KT	Sigma factor PP2C-like phosphatases	-	-	-	-	-	-	-	-	-	-	-	-	SpoIIE
BYD3_k127_678667_1	385682.AFSL01000064_gene1705	7.084e-83	286.0	COG2221@1|root,COG4624@1|root,COG2221@2|Bacteria,COG4624@2|Bacteria,4NFXC@976|Bacteroidetes,2FP4U@200643|Bacteroidia,3XJD3@558415|Marinilabiliaceae	976|Bacteroidetes	C	Putative Fe-S cluster	-	-	-	-	-	-	-	-	-	-	-	-	FeS,Fe_hyd_lg_C,Fer4,Fer4_10
BYD3_k127_682922_4	1537994.JQFW01000056_gene890	3.634e-21	97.0	COG0642@1|root,COG2205@2|Bacteria,1NRP8@1224|Proteobacteria,1SKTW@1236|Gammaproteobacteria,4660D@72275|Alteromonadaceae	1236|Gammaproteobacteria	T	Histidine kinase	-	-	-	-	-	-	-	-	-	-	-	-	GAF,GAF_3,HATPase_c,HisKA,Hpt,PAS_3,PAS_9,Response_reg
BYD3_k127_682922_2	56780.SYN_02541	2.65e-112	378.0	COG1295@1|root,COG1959@1|root,COG1295@2|Bacteria,COG1959@2|Bacteria,1QICW@1224|Proteobacteria,42MBW@68525|delta/epsilon subdivisions,2WK2Z@28221|Deltaproteobacteria,2MQRA@213462|Syntrophobacterales	28221|Deltaproteobacteria	K	Virulence factor BrkB	-	-	-	ko:K07058	-	-	-	-	ko00000	-	-	-	Rrf2,Virul_fac_BrkB
BYD3_k127_682922_1	927658.AJUM01000022_gene1031	1.158e-191	602.0	COG0524@1|root,COG0524@2|Bacteria,4NH8K@976|Bacteroidetes,2FM8P@200643|Bacteroidia,3XIZT@558415|Marinilabiliaceae	976|Bacteroidetes	G	pfkB family carbohydrate kinase	-	-	2.7.1.45	ko:K00874	ko00030,ko01100,ko01120,ko01200,map00030,map01100,map01120,map01200	M00061,M00308,M00631	R01541	RC00002,RC00017	ko00000,ko00001,ko00002,ko01000	-	-	-	PfkB
BYD3_k127_682922_0	742725.HMPREF9450_00636	2.749e-241	764.0	COG0823@1|root,COG1506@1|root,COG0823@2|Bacteria,COG1506@2|Bacteria,4NHS5@976|Bacteroidetes,2FN1K@200643|Bacteroidia,22U1Q@171550|Rikenellaceae	976|Bacteroidetes	EU	X-Pro dipeptidyl-peptidase (S15 family)	pop	GO:0003674,GO:0003824,GO:0004177,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0006508,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008238,GO:0008239,GO:0009056,GO:0009987,GO:0016787,GO:0019538,GO:0033218,GO:0034641,GO:0042277,GO:0042597,GO:0042802,GO:0042803,GO:0043170,GO:0043171,GO:0043603,GO:0044237,GO:0044238,GO:0044248,GO:0044464,GO:0046983,GO:0070011,GO:0071704,GO:0140096,GO:1901564,GO:1901565,GO:1901575	-	-	-	-	-	-	-	-	-	-	PD40,Peptidase_S9
BYD3_k127_682922_3	243090.RB2092	6.747e-67	235.0	COG2159@1|root,COG2159@2|Bacteria	2|Bacteria	E	amidohydrolase	-	-	-	-	-	-	-	-	-	-	-	-	Amidohydro_2
BYD3_k127_6875730_9	1168289.AJKI01000051_gene835	2.49e-44	164.0	COG1778@1|root,COG1778@2|Bacteria,4NMHD@976|Bacteroidetes,2FTGQ@200643|Bacteroidia,3XJCA@558415|Marinilabiliaceae	976|Bacteroidetes	S	haloacid dehalogenase-like hydrolase	kdsC	-	3.1.3.45	ko:K03270	ko00540,ko01100,map00540,map01100	M00063	R03350	RC00017	ko00000,ko00001,ko00002,ko01000,ko01005	-	-	-	HAD_2,Hydrolase_3
BYD3_k127_6875730_8	485918.Cpin_1958	2.113e-54	203.0	COG0382@1|root,COG0382@2|Bacteria,4NFRM@976|Bacteroidetes,1IYC2@117747|Sphingobacteriia	976|Bacteroidetes	H	UbiA prenyltransferase family	ubiA	-	2.5.1.39	ko:K03179	ko00130,ko01100,ko01110,map00130,map01100,map01110	M00117	R05000,R05615	RC00209,RC02895	ko00000,ko00001,ko00002,ko01000,ko01006	-	-	-	UbiA
BYD3_k127_6875730_7	471870.BACINT_03115	1.032e-65	229.0	COG0424@1|root,COG0424@2|Bacteria,4NNXV@976|Bacteroidetes,2FKYZ@200643|Bacteroidia,4AKEX@815|Bacteroidaceae	976|Bacteroidetes	D	COG0424 Nucleotide-binding protein implicated in inhibition of septum formation	maf	-	-	ko:K06287	-	-	-	-	ko00000	-	-	-	Maf
BYD3_k127_6875730_0	385682.AFSL01000019_gene2217	1.349e-219	702.0	COG0497@1|root,COG0497@2|Bacteria,4PMJC@976|Bacteroidetes,2G0DC@200643|Bacteroidia,3XJNG@558415|Marinilabiliaceae	976|Bacteroidetes	L	Peptidase S46	-	-	-	-	-	-	-	-	-	-	-	-	Peptidase_S46
BYD3_k127_6875730_11	1173022.Cri9333_2605	5.038e-36	139.0	COG1359@1|root,COG1359@2|Bacteria,1G8H0@1117|Cyanobacteria,1HC7H@1150|Oscillatoriales	1117|Cyanobacteria	S	Antibiotic biosynthesis monooxygenase	-	-	-	-	-	-	-	-	-	-	-	-	ABM
BYD3_k127_6875730_2	572544.Ilyop_0916	3.245e-113	378.0	COG1454@1|root,COG1454@2|Bacteria,3792I@32066|Fusobacteria	32066|Fusobacteria	C	PFAM Iron-containing alcohol dehydrogenase	fucO	-	1.1.1.77	ko:K00048	ko00630,ko00640,ko01120,map00630,map00640,map01120	-	R01781,R02257	RC00087,RC00099	ko00000,ko00001,ko01000	-	-	-	Fe-ADH
BYD3_k127_6875730_12	99598.Cal7507_3642	3.495e-11	65.0	2EMYS@1|root,33FKY@2|Bacteria,1GF1P@1117|Cyanobacteria,1HPVB@1161|Nostocales	1117|Cyanobacteria	S	Protein of unknown function (DUF2795)	-	-	-	-	-	-	-	-	-	-	-	-	DUF2795
BYD3_k127_6875730_3	1121904.ARBP01000004_gene987	2.415e-105	354.0	COG4124@1|root,COG4124@2|Bacteria,4NEZG@976|Bacteroidetes,47MNT@768503|Cytophagia	976|Bacteroidetes	G	Glycosyl hydrolase family 26	-	-	3.2.1.78	ko:K01218	ko00051,ko02024,map00051,map02024	-	R01332	RC00467	ko00000,ko00001,ko01000	-	GH26	-	Glyco_hydro_26
BYD3_k127_6875730_10	385682.AFSL01000040_gene243	3.232e-37	145.0	COG0139@1|root,COG0140@1|root,COG0139@2|Bacteria,COG0140@2|Bacteria,4NERE@976|Bacteroidetes,2FKYQ@200643|Bacteroidia,3XJ1F@558415|Marinilabiliaceae	976|Bacteroidetes	E	Phosphoribosyl-AMP cyclohydrolase	hisI	-	3.5.4.19,3.6.1.31	ko:K11755	ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230	M00026	R04035,R04037	RC00002,RC01055	ko00000,ko00001,ko00002,ko01000	-	-	-	PRA-CH,PRA-PH
BYD3_k127_6875730_1	1408473.JHXO01000006_gene1259	4.068e-121	392.0	COG0107@1|root,COG0107@2|Bacteria,4NE16@976|Bacteroidetes,2FNY2@200643|Bacteroidia	976|Bacteroidetes	E	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit	hisF	GO:0000107,GO:0003674,GO:0003824,GO:0016740,GO:0016757,GO:0016763	-	ko:K02500	ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230	M00026	R04558	RC00010,RC01190,RC01943	ko00000,ko00001,ko00002,ko01000	-	-	-	His_biosynth
BYD3_k127_6875730_6	547042.BACCOPRO_01268	1.374e-84	286.0	COG0106@1|root,COG0106@2|Bacteria,4NEEX@976|Bacteroidetes,2FMBX@200643|Bacteroidia,4APC5@815|Bacteroidaceae	976|Bacteroidetes	E	1-(5-phosphoribosyl)-5- (5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase	hisA	GO:0000105,GO:0000162,GO:0003674,GO:0003824,GO:0003949,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006547,GO:0006568,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009308,GO:0009309,GO:0009987,GO:0016053,GO:0016853,GO:0016860,GO:0016861,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0042401,GO:0042430,GO:0042435,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046219,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607	5.3.1.16	ko:K01814	ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230	M00026	R04640	RC00945	ko00000,ko00001,ko00002,ko01000	-	-	-	His_biosynth
BYD3_k127_6875730_5	1168034.FH5T_16990	8.938e-85	285.0	COG0118@1|root,COG0118@2|Bacteria,4NF4J@976|Bacteroidetes,2FPAY@200643|Bacteroidia	976|Bacteroidetes	E	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR	hisH	-	-	ko:K02501	ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230	M00026	R04558	RC00010,RC01190,RC01943	ko00000,ko00001,ko00002,ko01000	-	-	-	GATase
BYD3_k127_6875730_4	997884.HMPREF1068_03516	1.145e-101	335.0	COG0788@1|root,COG0788@2|Bacteria,4NEGJ@976|Bacteroidetes,2FN3H@200643|Bacteroidia,4AMUY@815|Bacteroidaceae	976|Bacteroidetes	F	Catalyzes the hydrolysis of 10-formyltetrahydrofolate (formyl-FH4) to formate and tetrahydrofolate (FH4)	purU	-	3.5.1.10	ko:K01433	ko00630,ko00670,map00630,map00670	-	R00944	RC00026,RC00111	ko00000,ko00001,ko01000	-	-	-	ACT,Formyl_trans_N
BYD3_k127_6894923_0	1408473.JHXO01000008_gene2836	6.733e-128	417.0	COG4403@1|root,COG4403@2|Bacteria,4PMC1@976|Bacteroidetes	976|Bacteroidetes	V	Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella	-	-	-	-	-	-	-	-	-	-	-	-	VCBS
BYD3_k127_6894923_2	1107311.Q767_07760	1.648e-73	254.0	COG2085@1|root,COG2085@2|Bacteria,4NPSZ@976|Bacteroidetes,1ICXS@117743|Flavobacteriia,2NVZG@237|Flavobacterium	976|Bacteroidetes	S	NADP oxidoreductase coenzyme F420-dependent	-	-	1.5.1.40	ko:K06988	-	-	-	-	ko00000,ko01000	-	-	-	F420_oxidored
BYD3_k127_6894923_1	1122931.AUAE01000016_gene2680	1.017e-89	306.0	COG2091@1|root,COG2091@2|Bacteria,4NFQ6@976|Bacteroidetes,2FS4M@200643|Bacteroidia,2309R@171551|Porphyromonadaceae	976|Bacteroidetes	H	lysine biosynthetic process via aminoadipic acid	-	-	-	-	-	-	-	-	-	-	-	-	CBM9_1
BYD3_k127_691914_6	313606.M23134_02237	3.785e-32	144.0	COG3209@1|root,COG3291@1|root,COG3386@1|root,COG4932@1|root,COG3209@2|Bacteria,COG3291@2|Bacteria,COG3386@2|Bacteria,COG4932@2|Bacteria,4NJ9V@976|Bacteroidetes,47N8F@768503|Cytophagia	976|Bacteroidetes	G	Repeats in polycystic kidney disease 1 (PKD1) and other proteins	-	-	-	-	-	-	-	-	-	-	-	-	CHU_C,PKD
BYD3_k127_691914_3	1124780.ANNU01000064_gene450	5.582e-60	229.0	COG3291@1|root,COG3291@2|Bacteria,4PHTU@976|Bacteroidetes,47P4N@768503|Cytophagia	976|Bacteroidetes	E	C-terminal domain of CHU protein family	-	-	-	-	-	-	-	-	-	-	-	-	CHU_C,PKD
BYD3_k127_691914_9	869213.JCM21142_93400	1.078e-12	80.0	COG3291@1|root,COG3291@2|Bacteria,4PHYT@976|Bacteroidetes,47WXR@768503|Cytophagia	976|Bacteroidetes	S	C-terminal domain of CHU protein family	-	-	-	-	-	-	-	-	-	-	-	-	CHU_C
BYD3_k127_691914_1	861299.J421_1019	6.836e-100	331.0	COG1402@1|root,COG1402@2|Bacteria,1ZTKC@142182|Gemmatimonadetes	142182|Gemmatimonadetes	S	Creatinine amidohydrolase	-	-	3.5.2.10	ko:K01470	ko00330,map00330	-	R01884	RC00615	ko00000,ko00001,ko01000	-	-	-	Creatininase
BYD3_k127_691914_7	1041826.FCOL_10155	2.846e-27	117.0	COG0806@1|root,COG0806@2|Bacteria,4NQF0@976|Bacteroidetes,1I17F@117743|Flavobacteriia,2NUI5@237|Flavobacterium	976|Bacteroidetes	J	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes	rimM	-	-	ko:K02860	-	-	-	-	ko00000,ko03009	-	-	-	PRC,RimM
BYD3_k127_691914_4	886379.AEWI01000023_gene68	2.229e-57	206.0	COG0228@1|root,COG0228@2|Bacteria,4NNY8@976|Bacteroidetes,2FN6N@200643|Bacteroidia,3XJUY@558415|Marinilabiliaceae	976|Bacteroidetes	J	Ribosomal protein S16	rpsP	GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904	-	ko:K02959	ko03010,map03010	M00178	-	-	br01610,ko00000,ko00001,ko00002,ko03011,ko03029	-	-	-	Ribosomal_S16
BYD3_k127_691914_8	28115.HR11_04005	2.466e-24	104.0	COG0268@1|root,COG0268@2|Bacteria,4NSB1@976|Bacteroidetes,2FTW4@200643|Bacteroidia,22YCU@171551|Porphyromonadaceae	976|Bacteroidetes	J	Binds directly to 16S ribosomal RNA	rpsT	-	-	ko:K02968	ko03010,map03010	M00178	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_S20p
BYD3_k127_691914_2	869213.JCM21142_52091	2.382e-84	286.0	COG2003@1|root,COG2003@2|Bacteria,4NFBF@976|Bacteroidetes,47KTY@768503|Cytophagia	976|Bacteroidetes	E	Belongs to the UPF0758 family	radC	-	-	ko:K03630	-	-	-	-	ko00000	-	-	-	RadC
BYD3_k127_691914_5	1123376.AUIU01000014_gene621	4.011e-39	151.0	COG0801@1|root,COG0801@2|Bacteria,3J19N@40117|Nitrospirae	40117|Nitrospirae	H	7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK)	folK	-	2.7.6.3	ko:K00950	ko00790,ko01100,map00790,map01100	M00126,M00841	R03503	RC00002,RC00017	ko00000,ko00001,ko00002,ko01000	-	-	-	HPPK
BYD3_k127_691914_0	468059.AUHA01000003_gene1428	5.08e-146	476.0	COG0616@1|root,COG0616@2|Bacteria,4NES1@976|Bacteroidetes,1IP6H@117747|Sphingobacteriia	976|Bacteroidetes	OU	signal peptide peptidase SppA, 67K type	sppA	-	-	ko:K04773	-	-	-	-	ko00000,ko01000,ko01002	-	-	-	Peptidase_S49
BYD3_k127_6941175_6	485917.Phep_3044	1.108e-43	163.0	COG2610@1|root,COG2610@2|Bacteria,4NFQH@976|Bacteroidetes,1IQKX@117747|Sphingobacteriia	976|Bacteroidetes	EG	COGs COG2610 H gluconate symporter and related permease	-	-	-	ko:K03299	-	-	-	-	ko00000,ko02000	2.A.8	-	-	GntP_permease
BYD3_k127_6941175_2	763034.HMPREF9446_01326	4.212e-94	313.0	COG0564@1|root,COG0564@2|Bacteria,4NFS8@976|Bacteroidetes,2FN9G@200643|Bacteroidia,4AKPN@815|Bacteroidaceae	976|Bacteroidetes	J	ribosomal pseudouridine synthase C, large subunit	rluC	-	5.4.99.23,5.4.99.28,5.4.99.29	ko:K06177,ko:K06180	-	-	-	-	ko00000,ko01000,ko03009,ko03016	-	-	-	PseudoU_synth_2
BYD3_k127_6941175_1	385682.AFSL01000089_gene935	3.251e-132	426.0	COG0413@1|root,COG0413@2|Bacteria,4NDX4@976|Bacteroidetes,2FNNC@200643|Bacteroidia,3XIQF@558415|Marinilabiliaceae	976|Bacteroidetes	H	Ketopantoate hydroxymethyltransferase	panB	-	2.1.2.11	ko:K00606	ko00770,ko01100,ko01110,map00770,map01100,map01110	M00119	R01226	RC00022,RC00200	ko00000,ko00001,ko00002,ko01000	-	-	-	Pantoate_transf
BYD3_k127_6941175_0	385682.AFSL01000095_gene825	0.0	1016.0	COG0443@1|root,COG0443@2|Bacteria,4NERF@976|Bacteroidetes,2FMNH@200643|Bacteroidia,3XJ33@558415|Marinilabiliaceae	976|Bacteroidetes	O	Hsp70 protein	dnaK	-	-	ko:K04043	ko03018,ko04212,ko05152,map03018,map04212,map05152	-	-	-	ko00000,ko00001,ko03019,ko03029,ko03110,ko04147	1.A.33.1	-	-	HSP70
BYD3_k127_6941175_3	1123248.KB893317_gene4303	1.846e-85	292.0	COG1295@1|root,COG1295@2|Bacteria,4NFG8@976|Bacteroidetes,1IQ97@117747|Sphingobacteriia	976|Bacteroidetes	S	TIGRFAM YihY family protein (not ribonuclease BN)	-	-	-	ko:K07058	-	-	-	-	ko00000	-	-	-	Virul_fac_BrkB
BYD3_k127_6941175_4	1304885.AUEY01000007_gene1334	4.012e-55	203.0	COG0716@1|root,COG1149@1|root,COG0716@2|Bacteria,COG1149@2|Bacteria,1NFA5@1224|Proteobacteria,42WN8@68525|delta/epsilon subdivisions,2WRNS@28221|Deltaproteobacteria,2MNUP@213118|Desulfobacterales	28221|Deltaproteobacteria	C	Flavodoxin domain	-	-	-	-	-	-	-	-	-	-	-	-	Fer4,Flavodoxin_5
BYD3_k127_6941175_5	927658.AJUM01000022_gene1156	3.088e-45	173.0	COG2849@1|root,COG2849@2|Bacteria,4NP2Z@976|Bacteroidetes,2FU6T@200643|Bacteroidia,3XJ7E@558415|Marinilabiliaceae	976|Bacteroidetes	S	MORN repeat variant	-	-	-	-	-	-	-	-	-	-	-	-	MORN_2
BYD3_k127_6941175_7	880074.BARVI_10205	6.546e-20	95.0	COG1404@1|root,COG1404@2|Bacteria,4NEIJ@976|Bacteroidetes,2FNT5@200643|Bacteroidia,22W7I@171551|Porphyromonadaceae	976|Bacteroidetes	O	Subtilase family	aprN	-	-	-	-	-	-	-	-	-	-	-	Peptidase_S8
BYD3_k127_696134_0	269798.CHU_3520	7.829e-158	520.0	COG0475@1|root,COG0475@2|Bacteria,4NFPE@976|Bacteroidetes,47NZK@768503|Cytophagia	976|Bacteroidetes	P	Sodium/hydrogen exchanger family	nhaS3	-	-	-	-	-	-	-	-	-	-	-	Na_H_Exchanger
BYD3_k127_696134_1	925409.KI911562_gene758	7.817e-108	355.0	COG2321@1|root,COG2321@2|Bacteria,4NDTZ@976|Bacteroidetes,1INUC@117747|Sphingobacteriia	976|Bacteroidetes	S	Neutral zinc metallopeptidase	ypfJ	-	-	ko:K07054	-	-	-	-	ko00000	-	-	-	Zn_peptidase
BYD3_k127_696134_2	643867.Ftrac_2134	2.758e-55	207.0	COG0457@1|root,COG0457@2|Bacteria,4NGID@976|Bacteroidetes,47PKP@768503|Cytophagia	976|Bacteroidetes	S	Tetratricopeptide repeat	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_6983169_0	1408473.JHXO01000008_gene2735	6.812e-113	379.0	COG1629@1|root,COG4771@2|Bacteria,4NEBC@976|Bacteroidetes,2FXD0@200643|Bacteroidia	976|Bacteroidetes	P	TonB-dependent Receptor Plug Domain	-	-	-	-	-	-	-	-	-	-	-	-	CarbopepD_reg_2,Plug,TonB_dep_Rec
BYD3_k127_6983169_1	1408473.JHXO01000008_gene2734	3.687e-59	215.0	COG3712@1|root,COG3712@2|Bacteria,4NH8I@976|Bacteroidetes,2FU8M@200643|Bacteroidia	976|Bacteroidetes	PT	Domain of unknown function (DUF4974)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4974,FecR
BYD3_k127_6983169_3	1235803.C825_01315	3.228e-40	154.0	COG1595@1|root,COG1595@2|Bacteria,4NRPN@976|Bacteroidetes,2FUAJ@200643|Bacteroidia	976|Bacteroidetes	K	Sigma-70, region 4	-	-	-	ko:K03088	-	-	-	-	ko00000,ko03021	-	-	-	Sigma70_r2,Sigma70_r4_2
BYD3_k127_6983169_2	1123008.KB905703_gene582	2.171e-43	161.0	COG0664@1|root,COG0664@2|Bacteria,4P0I7@976|Bacteroidetes,2G2I2@200643|Bacteroidia	976|Bacteroidetes	K	Cyclic nucleotide-monophosphate binding domain	-	-	-	-	-	-	-	-	-	-	-	-	HTH_Crp_2,cNMP_binding
BYD3_k127_698839_9	869213.JCM21142_104172	3.409e-55	199.0	COG1794@1|root,COG1794@2|Bacteria,4NI4F@976|Bacteroidetes,47UIB@768503|Cytophagia	976|Bacteroidetes	M	Belongs to the aspartate glutamate racemases family	-	-	5.1.1.13	ko:K01779	ko00250,ko01054,map00250,map01054	-	R00491	RC00302	ko00000,ko00001,ko01000	-	-	-	Asp_Glu_race
BYD3_k127_698839_3	509635.N824_06735	3.712e-81	276.0	28K10@1|root,2Z9QW@2|Bacteria,4NF8J@976|Bacteroidetes,1ISKT@117747|Sphingobacteriia	976|Bacteroidetes	S	Domain of unknown function (DUF4918)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4918
BYD3_k127_698839_1	471854.Dfer_1419	1.641e-98	332.0	COG1162@1|root,COG1162@2|Bacteria,4NE24@976|Bacteroidetes,47PF6@768503|Cytophagia	976|Bacteroidetes	S	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit	-	-	3.1.3.100	ko:K06949	ko00730,ko01100,map00730,map01100	-	R00615,R02135	RC00002,RC00017	ko00000,ko00001,ko01000,ko03009	-	-	-	RsgA_GTPase
BYD3_k127_698839_12	641526.ADIWIN_3574	4.799e-07	63.0	COG3291@1|root,COG3291@2|Bacteria,4PMR5@976|Bacteroidetes,1IJX3@117743|Flavobacteriia	976|Bacteroidetes	N	cellulose binding	-	-	-	-	-	-	-	-	-	-	-	-	Big_2
BYD3_k127_698839_4	945713.IALB_3126	1.116e-67	251.0	COG4412@1|root,COG4412@2|Bacteria	2|Bacteria	S	peptidase activity, acting on L-amino acid peptides	ina	-	-	-	-	-	-	-	-	-	-	-	PDZ_2,Peptidase_M6
BYD3_k127_698839_8	1123277.KB893187_gene2735	3.529e-58	207.0	COG2353@1|root,COG2353@2|Bacteria,4NNMD@976|Bacteroidetes,47P9R@768503|Cytophagia	976|Bacteroidetes	S	Belongs to the UPF0312 family	-	-	-	-	-	-	-	-	-	-	-	-	YceI
BYD3_k127_698839_0	643867.Ftrac_1450	1.198e-100	340.0	COG0204@1|root,COG0204@2|Bacteria,4NGR9@976|Bacteroidetes,47K88@768503|Cytophagia	976|Bacteroidetes	I	Phosphate acyltransferases	-	-	-	-	-	-	-	-	-	-	-	-	Acyltransferase
BYD3_k127_698839_6	1408473.JHXO01000008_gene2783	1.975e-65	227.0	COG0054@1|root,COG0054@2|Bacteria,4NNUC@976|Bacteroidetes,2FNGS@200643|Bacteroidia	976|Bacteroidetes	H	Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin	ribH	GO:0000906,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006766,GO:0006767,GO:0006771,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009231,GO:0009987,GO:0016740,GO:0016765,GO:0017144,GO:0018130,GO:0034641,GO:0042364,GO:0042726,GO:0042727,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576	2.5.1.78	ko:K00794	ko00740,ko01100,ko01110,map00740,map01100,map01110	M00125	R04457	RC00960	ko00000,ko00001,ko00002,ko01000	-	-	-	DMRL_synthase
BYD3_k127_698839_5	385682.AFSL01000101_gene18	1.671e-65	231.0	COG0457@1|root,COG0457@2|Bacteria,4PKF6@976|Bacteroidetes,2FNWT@200643|Bacteroidia,3XJ42@558415|Marinilabiliaceae	976|Bacteroidetes	S	Tetratricopeptide repeat	-	-	-	-	-	-	-	-	-	-	-	-	TPR_12,TPR_16,TPR_21,TPR_6,TPR_7,TPR_8
BYD3_k127_698839_2	313606.M23134_02722	7.17e-82	310.0	COG0840@1|root,COG2203@1|root,COG0840@2|Bacteria,COG2203@2|Bacteria,4NICW@976|Bacteroidetes	976|Bacteroidetes	T	Domain present in phytochromes and cGMP-specific phosphodiesterases.	-	-	-	-	-	-	-	-	-	-	-	-	GAF_2
BYD3_k127_698839_13	247490.KSU1_C1313	0.0006626	54.0	COG4191@1|root,COG4191@2|Bacteria	2|Bacteria	T	Histidine kinase	-	-	2.7.13.3	ko:K02482	-	-	-	-	ko00000,ko01000,ko01001,ko02022	-	-	-	GAF_2,HAMP,HATPase_c,HisKA,PAS,PAS_3,PAS_4,PAS_8,PAS_9,Response_reg
BYD3_k127_698839_11	1407650.BAUB01000007_gene1499	5.378e-10	74.0	COG0642@1|root,COG2205@2|Bacteria,1G09B@1117|Cyanobacteria,1H42V@1129|Synechococcus	1117|Cyanobacteria	T	Histidine kinase	-	-	2.1.1.80,3.1.1.61	ko:K13924	ko02020,ko02030,map02020,map02030	M00506	-	-	ko00000,ko00001,ko00002,ko01000,ko02022,ko02035	-	-	-	CheB_methylest,CheR,CheR_N,GAF,HATPase_c,HisKA,Hpt,PAS_10,PAS_3,PAS_4,PAS_8,PAS_9,Response_reg
BYD3_k127_698839_10	583355.Caka_1362	1.58e-45	191.0	COG3829@1|root,COG5000@1|root,COG3829@2|Bacteria,COG5000@2|Bacteria,46S9G@74201|Verrucomicrobia	74201|Verrucomicrobia	T	histidine kinase A domain protein	-	-	-	-	-	-	-	-	-	-	-	-	HATPase_c,HisKA,PAS_4,Response_reg
BYD3_k127_698839_7	886377.Murru_1494	1.656e-60	219.0	COG0657@1|root,COG0657@2|Bacteria,4NGAF@976|Bacteroidetes,1HZ5F@117743|Flavobacteriia	976|Bacteroidetes	I	Protein of unknown function (DUF1460)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1460
BYD3_k127_7033099_7	927658.AJUM01000043_gene806	2.389e-51	184.0	COG0452@1|root,COG0452@2|Bacteria,4NE46@976|Bacteroidetes,2FNDG@200643|Bacteroidia,3XJ8W@558415|Marinilabiliaceae	976|Bacteroidetes	H	Flavoprotein	coaBC	-	4.1.1.36,6.3.2.5	ko:K13038	ko00770,ko01100,map00770,map01100	M00120	R03269,R04231	RC00064,RC00090,RC00822	ko00000,ko00001,ko00002,ko01000	-	-	-	DFP,Flavoprotein
BYD3_k127_7033099_6	760192.Halhy_2725	8.416e-73	251.0	COG0452@1|root,COG0452@2|Bacteria,4NE46@976|Bacteroidetes,1IPJR@117747|Sphingobacteriia	976|Bacteroidetes	H	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine	coaBC	-	4.1.1.36,6.3.2.5	ko:K13038	ko00770,ko01100,map00770,map01100	M00120	R03269,R04231	RC00064,RC00090,RC00822	ko00000,ko00001,ko00002,ko01000	-	-	-	DFP,Flavoprotein
BYD3_k127_7033099_4	1168034.FH5T_17555	2.23e-88	301.0	28HA8@1|root,2Z7MQ@2|Bacteria,4NEJD@976|Bacteroidetes,2FP92@200643|Bacteroidia	976|Bacteroidetes	S	Domain of unknown function (DUF4835)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4835
BYD3_k127_7033099_1	1408473.JHXO01000013_gene529	1.49e-166	540.0	COG0497@1|root,COG0497@2|Bacteria,4NE3I@976|Bacteroidetes,2FMIG@200643|Bacteroidia	976|Bacteroidetes	L	May be involved in recombinational repair of damaged DNA	recN	-	-	ko:K03631	-	-	-	-	ko00000,ko03400	-	-	-	SMC_N
BYD3_k127_7033099_2	742725.HMPREF9450_00344	5.619e-139	445.0	COG0623@1|root,COG0623@2|Bacteria,4NEVE@976|Bacteroidetes,2FM85@200643|Bacteroidia,22U1H@171550|Rikenellaceae	976|Bacteroidetes	I	Enoyl-(Acyl carrier protein) reductase	fabI	-	1.3.1.10,1.3.1.9	ko:K00208	ko00061,ko00333,ko00780,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01100,map01130,map01212	M00083,M00572	R01404,R04429,R04430,R04724,R04725,R04955,R04956,R04958,R04959,R04961,R04962,R04966,R04967,R04969,R04970,R07765,R10118,R10122,R11671	RC00052,RC00076,RC00120	ko00000,ko00001,ko00002,ko01000,ko01004	-	-	-	adh_short_C2
BYD3_k127_7033099_5	153721.MYP_3528	1.665e-75	257.0	COG0231@1|root,COG0231@2|Bacteria,4NDXA@976|Bacteroidetes,47MZS@768503|Cytophagia	976|Bacteroidetes	J	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase	efp	GO:0003674,GO:0003676,GO:0003723,GO:0003746,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006412,GO:0006414,GO:0006518,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576	-	ko:K02356	-	-	-	-	ko00000,ko03012	-	-	-	EFP,EFP_N,Elong-fact-P_C
BYD3_k127_7033099_0	869213.JCM21142_104561	0.0	1006.0	COG0556@1|root,COG0556@2|Bacteria,4NE6E@976|Bacteroidetes,47KBV@768503|Cytophagia	976|Bacteroidetes	L	damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage	uvrB	-	-	ko:K03702	ko03420,map03420	-	-	-	ko00000,ko00001,ko03400	-	-	-	Helicase_C,ResIII,UVR,UvrB
BYD3_k127_7033099_3	886379.AEWI01000022_gene107	1.153e-122	408.0	COG1418@1|root,COG2114@1|root,COG1418@2|Bacteria,COG2114@2|Bacteria,4PIV7@976|Bacteroidetes,2G20W@200643|Bacteroidia,3XIT9@558415|Marinilabiliaceae	976|Bacteroidetes	T	Adenylyl- / guanylyl cyclase, catalytic domain	-	-	-	-	-	-	-	-	-	-	-	-	Guanylate_cyc,HD
BYD3_k127_7033099_8	886379.AEWI01000018_gene1314	3.193e-10	64.0	COG0628@1|root,COG0628@2|Bacteria,4NFHZ@976|Bacteroidetes,2FN2B@200643|Bacteroidia,3XJMB@558415|Marinilabiliaceae	976|Bacteroidetes	S	AI-2E family transporter	-	-	-	-	-	-	-	-	-	-	-	-	AI-2E_transport
BYD3_k127_7049706_1	1185876.BN8_00772	8.471e-107	383.0	COG3209@1|root,COG3291@1|root,COG3209@2|Bacteria,COG3291@2|Bacteria,4NDZC@976|Bacteroidetes,47MNQ@768503|Cytophagia	976|Bacteroidetes	O	SprB repeat	-	-	-	-	-	-	-	-	-	-	-	-	CHU_C,PKD,SprB,TIG
BYD3_k127_7049706_3	1270193.JARP01000001_gene2852	3.561e-09	71.0	COG1361@1|root,COG3209@1|root,COG3291@1|root,COG1361@2|Bacteria,COG3209@2|Bacteria,COG3291@2|Bacteria,4NDZC@976|Bacteroidetes,1I0G4@117743|Flavobacteriia,2NT7Y@237|Flavobacterium	976|Bacteroidetes	M	Pkd domain containing protein	-	-	-	-	-	-	-	-	-	-	-	-	CHU_C,DUF11
BYD3_k127_7049706_2	643867.Ftrac_1889	4.556e-30	132.0	COG2885@1|root,COG2885@2|Bacteria,4PNPK@976|Bacteroidetes	976|Bacteroidetes	M	Pfam:DUF3308	-	-	-	-	-	-	-	-	-	-	-	-	PorP_SprF
BYD3_k127_7049706_0	1408473.JHXO01000010_gene3748	4.985e-204	656.0	COG4485@1|root,COG4485@2|Bacteria,4NEE5@976|Bacteroidetes,2FMKE@200643|Bacteroidia	976|Bacteroidetes	S	Psort location CytoplasmicMembrane, score 10.00	-	-	-	-	-	-	-	-	-	-	-	-	YfhO
BYD3_k127_7073418_0	1408473.JHXO01000006_gene1275	1.559e-258	810.0	COG0480@1|root,COG0480@2|Bacteria,4NG4H@976|Bacteroidetes,2FN1G@200643|Bacteroidia	976|Bacteroidetes	J	elongation factor G	fusA2	-	-	ko:K02355	-	-	-	-	ko00000,ko03012,ko03029	-	-	-	EFG_C,EFG_II,EFG_IV,GTP_EFTU,GTP_EFTU_D2
BYD3_k127_7073418_1	1191523.MROS_0475	4.776e-66	239.0	COG1629@1|root,COG4771@2|Bacteria	2|Bacteria	P	TonB-dependent receptor	-	-	-	-	-	-	-	-	-	-	-	-	CarbopepD_reg_2,CarboxypepD_reg,OMP_b-brl_3,Plug
BYD3_k127_7079099_2	1408473.JHXO01000004_gene65	2.775e-39	157.0	COG3088@1|root,COG3088@2|Bacteria,4NGHU@976|Bacteroidetes,2FP8Y@200643|Bacteroidia	976|Bacteroidetes	O	Psort location CytoplasmicMembrane, score	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_7079099_0	385682.AFSL01000044_gene344	2.091e-119	392.0	COG2304@1|root,COG2304@2|Bacteria,4NDUC@976|Bacteroidetes,2FNXM@200643|Bacteroidia,3XJ05@558415|Marinilabiliaceae	976|Bacteroidetes	S	Aerotolerance regulator N-terminal	batA	-	-	ko:K07114	-	-	-	-	ko00000,ko02000	1.A.13.2.2,1.A.13.2.3	-	-	BatA,VWA
BYD3_k127_7079099_1	457424.BFAG_01987	9.706e-108	359.0	COG2304@1|root,COG2304@2|Bacteria,4NF7Y@976|Bacteroidetes,2FN4B@200643|Bacteroidia,4AM5X@815|Bacteroidaceae	976|Bacteroidetes	S	Von Willebrand factor type A domain	batB	-	-	ko:K07114	-	-	-	-	ko00000,ko02000	1.A.13.2.2,1.A.13.2.3	-	-	BatA,VWA,VWA_2
BYD3_k127_7079099_3	1121904.ARBP01000007_gene2910	1.733e-30	132.0	COG0457@1|root,COG0457@2|Bacteria,4NH2K@976|Bacteroidetes	976|Bacteroidetes	M	tetratricopeptide repeat	batC	-	-	-	-	-	-	-	-	-	-	-	TPR_1,TPR_11,TPR_16,TPR_17,TPR_2,TPR_8
BYD3_k127_714334_5	1453500.AT05_10800	1.042e-141	472.0	COG0760@1|root,COG0760@2|Bacteria,4NGIR@976|Bacteroidetes,1HXI1@117743|Flavobacteriia	976|Bacteroidetes	O	peptidyl-prolyl isomerase	-	-	5.2.1.8	ko:K03771	-	-	-	-	ko00000,ko01000,ko03110	-	-	-	Rotamase,Rotamase_2,Rotamase_3
BYD3_k127_714334_0	1168289.AJKI01000031_gene1092	2.359e-243	758.0	COG0516@1|root,COG0517@1|root,COG0516@2|Bacteria,COG0517@2|Bacteria,4NDXQ@976|Bacteroidetes,2FMKX@200643|Bacteroidia,3XJBU@558415|Marinilabiliaceae	976|Bacteroidetes	F	IMP dehydrogenase / GMP reductase domain	guaB	-	1.1.1.205	ko:K00088	ko00230,ko00983,ko01100,ko01110,map00230,map00983,map01100,map01110	M00050	R01130,R08240	RC00143,RC02207	ko00000,ko00001,ko00002,ko01000,ko04147	-	-	-	CBS,IMPDH
BYD3_k127_714334_2	1408473.JHXO01000005_gene1651	7.268e-221	702.0	COG0514@1|root,COG0514@2|Bacteria,4NEFD@976|Bacteroidetes,2FMT4@200643|Bacteroidia	976|Bacteroidetes	L	ATP-dependent DNA helicase RecQ	recQ2	-	3.6.4.12	ko:K03654	ko03018,map03018	-	-	-	ko00000,ko00001,ko01000,ko03400	-	-	-	DEAD,Helicase_C,RecQ_Zn_bind
BYD3_k127_714334_11	1358423.N180_08120	1.106e-17	83.0	COG0171@1|root,COG0388@1|root,COG0171@2|Bacteria,COG0388@2|Bacteria,4NEXG@976|Bacteroidetes,1IPN6@117747|Sphingobacteriia	976|Bacteroidetes	H	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source	nadE	-	6.3.5.1	ko:K01950	ko00760,ko01100,map00760,map01100	M00115	R00257	RC00010,RC00100	ko00000,ko00001,ko00002,ko01000	-	-	-	CN_hydrolase,NAD_synthase
BYD3_k127_714334_3	1408473.JHXO01000006_gene1087	2.927e-190	606.0	COG0171@1|root,COG0388@1|root,COG0171@2|Bacteria,COG0388@2|Bacteria,4NEXG@976|Bacteroidetes,2G2WR@200643|Bacteroidia	976|Bacteroidetes	H	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source	nadE	-	6.3.5.1	ko:K01950	ko00760,ko01100,map00760,map01100	M00115	R00257	RC00010,RC00100	ko00000,ko00001,ko00002,ko01000	-	-	-	CN_hydrolase,NAD_synthase
BYD3_k127_714334_10	927658.AJUM01000024_gene2613	1.055e-24	113.0	2CJVV@1|root,32SAW@2|Bacteria,4NTMY@976|Bacteroidetes,2FYEY@200643|Bacteroidia,3XIXT@558415|Marinilabiliaceae	976|Bacteroidetes	S	Outer membrane protein beta-barrel domain	-	-	-	-	-	-	-	-	-	-	-	-	OMP_b-brl_2
BYD3_k127_714334_9	869213.JCM21142_104517	2.314e-57	212.0	COG5504@1|root,COG5504@2|Bacteria,4NFZP@976|Bacteroidetes,47N7G@768503|Cytophagia	976|Bacteroidetes	O	Gliding motility protein, GldB	gldB	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_714334_6	1122176.KB903545_gene842	5.553e-130	439.0	COG0308@1|root,COG0308@2|Bacteria,4NGUB@976|Bacteroidetes,1IQZU@117747|Sphingobacteriia	976|Bacteroidetes	E	Peptidase M1	-	-	3.4.11.2	ko:K01256	ko00480,ko01100,map00480,map01100	-	R00899,R04951	RC00096,RC00141	ko00000,ko00001,ko01000,ko01002	-	-	-	Peptidase_M1
BYD3_k127_714334_8	1197477.IA57_01790	5.313e-63	225.0	COG0300@1|root,COG0300@2|Bacteria,4NIAI@976|Bacteroidetes,1HWTS@117743|Flavobacteriia	976|Bacteroidetes	S	Belongs to the short-chain dehydrogenases reductases (SDR) family	-	-	-	ko:K07124	-	-	-	-	ko00000	-	-	-	adh_short
BYD3_k127_714334_12	525373.HMPREF0766_14439	1.986e-17	83.0	COG0230@1|root,COG0230@2|Bacteria,4NUTV@976|Bacteroidetes	976|Bacteroidetes	J	Belongs to the bacterial ribosomal protein bL34 family	rpmH	-	-	ko:K02914	ko03010,map03010	M00178	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_L34
BYD3_k127_714334_7	886379.AEWI01000031_gene271	1.058e-86	301.0	2CG1Y@1|root,2Z9QX@2|Bacteria,4NJI6@976|Bacteroidetes,2FPRX@200643|Bacteroidia,3XJ2E@558415|Marinilabiliaceae	976|Bacteroidetes	S	Protein of unknown function (DUF1573)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1573
BYD3_k127_714334_4	1168289.AJKI01000031_gene1129	1.007e-143	465.0	COG1703@1|root,COG1703@2|Bacteria,4NE7Y@976|Bacteroidetes,2FNHU@200643|Bacteroidia,3XJA1@558415|Marinilabiliaceae	976|Bacteroidetes	E	ArgK protein	argK	-	-	ko:K07588	-	-	-	-	ko00000,ko01000	-	-	-	ArgK
BYD3_k127_714334_1	385682.AFSL01000009_gene2466	3.755e-235	733.0	COG1249@1|root,COG1249@2|Bacteria,4NDVC@976|Bacteroidetes,2FM8Y@200643|Bacteroidia,3XJAC@558415|Marinilabiliaceae	976|Bacteroidetes	C	L-lysine 6-monooxygenase (NADPH-requiring)	lpdA	-	1.8.1.4	ko:K00382	ko00010,ko00020,ko00260,ko00280,ko00620,ko00630,ko00640,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00020,map00260,map00280,map00620,map00630,map00640,map01100,map01110,map01120,map01130,map01200	M00009,M00011,M00036,M00307,M00532	R00209,R01221,R01698,R03815,R07618,R08549	RC00004,RC00022,RC00583,RC02742,RC02833,RC02834	br01601,ko00000,ko00001,ko00002,ko01000,ko04147	-	-	-	Pyr_redox_2,Pyr_redox_dim
BYD3_k127_715753_1	504472.Slin_5218	1.095e-33	132.0	296MG@1|root,2ZTWR@2|Bacteria,4NNPK@976|Bacteroidetes,47PBA@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_715753_0	509635.N824_20665	8.881e-94	317.0	COG0604@1|root,COG0604@2|Bacteria,4NHHT@976|Bacteroidetes,1IPAJ@117747|Sphingobacteriia	976|Bacteroidetes	C	COG0604 NADPH quinone reductase and related Zn-dependent	-	-	-	-	-	-	-	-	-	-	-	-	ADH_N,ADH_zinc_N_2
BYD3_k127_715753_2	153721.MYP_4878	1.134e-22	106.0	COG3652@1|root,COG3652@2|Bacteria,4NZ9A@976|Bacteroidetes	976|Bacteroidetes	S	Domain of unknown function (DUF4142)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4142
BYD3_k127_7157673_1	1237149.C900_04741	2.429e-127	432.0	COG1629@1|root,COG4771@2|Bacteria,4PHVG@976|Bacteroidetes,47VPP@768503|Cytophagia	976|Bacteroidetes	P	TonB-dependent Receptor Plug Domain	-	-	-	-	-	-	-	-	-	-	-	-	Plug
BYD3_k127_7157673_8	385682.AFSL01000006_gene2376	7.215e-25	110.0	COG0642@1|root,COG2205@2|Bacteria,4NX2D@976|Bacteroidetes,2G28Q@200643|Bacteroidia,3XKD2@558415|Marinilabiliaceae	976|Bacteroidetes	T	Domain of unknown function (DUF4154)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4154
BYD3_k127_7157673_7	331678.Cphamn1_1135	1.005e-40	154.0	COG0864@1|root,COG0864@2|Bacteria,1FF7U@1090|Chlorobi	1090|Chlorobi	K	NikR C terminal nickel binding domain	-	-	-	ko:K07722	-	-	-	-	ko00000,ko03000	-	-	-	NikR_C,RHH_1
BYD3_k127_7157673_3	1121904.ARBP01000009_gene4136	3.173e-100	335.0	COG1209@1|root,COG1209@2|Bacteria,4NF32@976|Bacteroidetes,47K6F@768503|Cytophagia	976|Bacteroidetes	M	Nucleotidyl transferase	-	-	-	-	-	-	-	-	-	-	-	-	NTP_transf_3,NTP_transferase
BYD3_k127_7157673_2	643867.Ftrac_2404	1.075e-112	383.0	COG2203@1|root,COG2203@2|Bacteria,4NICW@976|Bacteroidetes,47NI3@768503|Cytophagia	976|Bacteroidetes	T	Domain present in phytochromes and cGMP-specific phosphodiesterases.	-	-	-	-	-	-	-	-	-	-	-	-	GAF_2,PAS_9
BYD3_k127_7157673_0	1168034.FH5T_10355	1.765e-137	448.0	COG1168@1|root,COG1168@2|Bacteria,4NETH@976|Bacteroidetes,2FMIZ@200643|Bacteroidia	976|Bacteroidetes	E	Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities	-	-	4.4.1.8	ko:K14155	ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230	-	R00782,R01286,R02408,R04941	RC00056,RC00069,RC00382,RC00488,RC00710,RC01245,RC02303	ko00000,ko00001,ko01000,ko01007	-	-	-	Aminotran_1_2
BYD3_k127_7157673_4	886379.AEWI01000023_gene76	1.287e-88	299.0	COG0030@1|root,COG0030@2|Bacteria,4NERB@976|Bacteroidetes,2FMH1@200643|Bacteroidia,3XJ37@558415|Marinilabiliaceae	976|Bacteroidetes	J	Ribosomal RNA adenine dimethylases	ksgA	-	2.1.1.182	ko:K02528	-	-	R10716	RC00003,RC03257	ko00000,ko01000,ko03009	-	-	-	RrnaAD
BYD3_k127_7157673_5	869213.JCM21142_338	1.069e-85	290.0	COG2239@1|root,COG2239@2|Bacteria,4NGGN@976|Bacteroidetes,47JTX@768503|Cytophagia	976|Bacteroidetes	P	Acts as a magnesium transporter	mgtE	-	-	ko:K06213	-	-	-	-	ko00000,ko02000	1.A.26.1	-	-	CBS,MgtE,MgtE_N
BYD3_k127_7157673_6	1168289.AJKI01000002_gene2239	2.325e-63	222.0	COG2239@1|root,COG2239@2|Bacteria,4NGGN@976|Bacteroidetes,2FN1M@200643|Bacteroidia,3XIN2@558415|Marinilabiliaceae	976|Bacteroidetes	P	MgtE intracellular N domain	mgtE	-	-	ko:K06213	-	-	-	-	ko00000,ko02000	1.A.26.1	-	-	CBS,MgtE,MgtE_N
BYD3_k127_7157673_9	1408433.JHXV01000006_gene2768	1.872e-09	62.0	COG3137@1|root,COG3137@2|Bacteria,4NGB2@976|Bacteroidetes,1HY5S@117743|Flavobacteriia,2PAT9@246874|Cryomorphaceae	976|Bacteroidetes	M	Protein of unknown function (DUF3078)	-	-	-	-	-	-	-	-	-	-	-	-	DUF3078
BYD3_k127_7174854_5	935567.JAES01000002_gene747	1.425e-82	286.0	COG2211@1|root,COG2211@2|Bacteria,1MVUM@1224|Proteobacteria,1SYFG@1236|Gammaproteobacteria,1X54D@135614|Xanthomonadales	135614|Xanthomonadales	G	MFS/sugar transport protein	xylP	-	-	-	-	-	-	-	-	-	-	-	MFS_2
BYD3_k127_7174854_2	700598.Niako_2679	1.026e-262	829.0	COG1361@1|root,COG1472@1|root,COG1361@2|Bacteria,COG1472@2|Bacteria,4NE90@976|Bacteroidetes,1IPUA@117747|Sphingobacteriia	976|Bacteroidetes	G	Glycosyl hydrolase family 3	-	-	3.2.1.21	ko:K05349	ko00460,ko00500,ko00940,ko01100,ko01110,map00460,map00500,map00940,map01100,map01110	-	R00026,R02558,R02887,R02985,R03527,R04949,R04998,R10035,R10039,R10040	RC00049,RC00059,RC00171,RC00262,RC00397,RC00451,RC00714,RC00746,RC01248	ko00000,ko00001,ko01000	-	GH3	-	Fn3-like,Glyco_hydro_3,Glyco_hydro_3_C,NAGLU,NAGLU_C,NAGLU_N
BYD3_k127_7174854_8	694427.Palpr_1642	7.921e-08	57.0	2DB7A@1|root,2Z7KK@2|Bacteria,4NGC2@976|Bacteroidetes,2FMN6@200643|Bacteroidia,22WQR@171551|Porphyromonadaceae	976|Bacteroidetes	S	Glycosyl hydrolase family 115	-	-	-	-	-	-	-	-	-	-	-	-	Glyco_hydro_115,Glyco_hydro_67N
BYD3_k127_7174854_1	452637.Oter_1999	0.0	1176.0	COG3209@1|root,COG3209@2|Bacteria	2|Bacteria	M	self proteolysis	-	-	-	-	-	-	-	-	-	-	-	-	LRR_5
BYD3_k127_7174854_6	1408473.JHXO01000004_gene45	4.375e-59	210.0	COG1773@1|root,COG1853@1|root,COG1773@2|Bacteria,COG1853@2|Bacteria,4NHF0@976|Bacteroidetes,2FUN6@200643|Bacteroidia	976|Bacteroidetes	C	rubredoxin	rubR	-	-	-	-	-	-	-	-	-	-	-	Rubredoxin
BYD3_k127_7174854_7	1121129.KB903360_gene3564	6.597e-36	138.0	COG0347@1|root,COG0347@2|Bacteria,4NSBG@976|Bacteroidetes,2FT39@200643|Bacteroidia,22YG9@171551|Porphyromonadaceae	976|Bacteroidetes	E	COG NOG19114 non supervised orthologous group	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_7174854_0	1408473.JHXO01000002_gene3953	0.0	1182.0	COG0841@1|root,COG0841@2|Bacteria,4NDZG@976|Bacteroidetes,2FM3B@200643|Bacteroidia	976|Bacteroidetes	V	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family	czcA	-	-	ko:K03296	-	-	-	-	ko00000	2.A.6.2	-	-	ACR_tran
BYD3_k127_7174854_3	1408473.JHXO01000002_gene3954	2.947e-90	308.0	COG0845@1|root,COG0845@2|Bacteria,4NF23@976|Bacteroidetes,2FMQJ@200643|Bacteroidia	976|Bacteroidetes	M	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family	-	-	-	ko:K03585	ko01501,ko01503,map01501,map01503	M00646,M00647,M00699,M00718	-	-	ko00000,ko00001,ko00002,ko01504,ko02000,ko03036	2.A.6.2,8.A.1.6	-	-	HlyD_D23
BYD3_k127_7174854_4	1121129.KB903360_gene3567	1.122e-86	296.0	COG1538@1|root,COG1538@2|Bacteria,4NF4X@976|Bacteroidetes,2FN2J@200643|Bacteroidia,22WEM@171551|Porphyromonadaceae	976|Bacteroidetes	MU	outer membrane efflux protein	-	-	-	-	-	-	-	-	-	-	-	-	OEP
BYD3_k127_7189576_3	1165841.SULAR_04963	0.0001298	49.0	COG1216@1|root,COG1216@2|Bacteria,1N5RX@1224|Proteobacteria,42SF0@68525|delta/epsilon subdivisions,2YRNI@29547|Epsilonproteobacteria	29547|Epsilonproteobacteria	S	Uncharacterised nucleotidyltransferase	-	-	-	-	-	-	-	-	-	-	-	-	NTP_transf_5
BYD3_k127_7189576_1	357804.Ping_2657	1.653e-54	213.0	COG0367@1|root,COG0367@2|Bacteria,1R77U@1224|Proteobacteria,1S5ZY@1236|Gammaproteobacteria	1236|Gammaproteobacteria	E	Asparagine synthase	-	-	6.3.5.4	ko:K01953	ko00250,ko01100,ko01110,map00250,map01100,map01110	-	R00578	RC00010	ko00000,ko00001,ko01000,ko01002	-	-	-	Asn_synthase,GATase_7
BYD3_k127_7189576_2	338966.Ppro_0056	4.06e-48	183.0	COG1493@1|root,COG1493@2|Bacteria,1RE0J@1224|Proteobacteria,42X32@68525|delta/epsilon subdivisions,2WUWM@28221|Deltaproteobacteria	28221|Deltaproteobacteria	T	Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_7189576_0	338966.Ppro_0057	2.571e-81	279.0	KOG1584@1|root,32BW5@2|Bacteria,1PW91@1224|Proteobacteria,42YNQ@68525|delta/epsilon subdivisions,2WTQC@28221|Deltaproteobacteria	28221|Deltaproteobacteria	H	Sulfotransferase domain	-	-	-	-	-	-	-	-	-	-	-	-	Sulfotransfer_1
BYD3_k127_7239156_1	1408473.JHXO01000013_gene557	1.79e-80	274.0	COG1629@1|root,COG4771@2|Bacteria,4NFQD@976|Bacteroidetes,2G3H3@200643|Bacteroidia	976|Bacteroidetes	P	TonB-dependent receptor	-	-	-	ko:K02014	-	-	-	-	ko00000,ko02000	1.B.14	-	-	CarbopepD_reg_2,Plug,TonB_dep_Rec
BYD3_k127_7239156_3	880071.Fleli_0107	9.652e-13	72.0	COG0793@1|root,COG0793@2|Bacteria,4NFEN@976|Bacteroidetes,47PTG@768503|Cytophagia	976|Bacteroidetes	M	PFAM Peptidase family S41	-	-	-	-	-	-	-	-	-	-	-	-	Peptidase_S41,Tricorn_C1
BYD3_k127_7239156_2	1296415.JACC01000011_gene585	1.372e-19	96.0	COG1266@1|root,COG1266@2|Bacteria,4NGBZ@976|Bacteroidetes,1HZ6J@117743|Flavobacteriia,2YHWG@290174|Aquimarina	976|Bacteroidetes	S	CAAX protease self-immunity	-	-	-	ko:K07052	-	-	-	-	ko00000	-	-	-	Abi
BYD3_k127_7239156_0	1124780.ANNU01000030_gene1113	2.978e-203	652.0	COG2091@1|root,COG2091@2|Bacteria,4NFQ6@976|Bacteroidetes,47NT4@768503|Cytophagia	976|Bacteroidetes	H	lysine biosynthetic process via aminoadipic acid	-	-	-	-	-	-	-	-	-	-	-	-	CBM9_1
BYD3_k127_7269313_1	1168034.FH5T_09195	5.626e-96	333.0	COG1629@1|root,COG4771@2|Bacteria,4NEIG@976|Bacteroidetes,2FM1K@200643|Bacteroidia	976|Bacteroidetes	P	TonB-dependent receptor	-	-	-	-	-	-	-	-	-	-	-	-	CarbopepD_reg_2,CarboxypepD_reg,OMP_b-brl_3,Plug
BYD3_k127_7269313_0	694427.Palpr_2067	8.089e-118	404.0	COG1555@1|root,COG1555@2|Bacteria,4NE88@976|Bacteroidetes,2FP15@200643|Bacteroidia,22X8S@171551|Porphyromonadaceae	976|Bacteroidetes	L	Psort location OuterMembrane, score	-	-	-	-	-	-	-	-	-	-	-	-	HHH_3
BYD3_k127_7269313_3	1120973.AQXL01000117_gene342	1.007e-88	301.0	COG0384@1|root,COG0384@2|Bacteria,1V38B@1239|Firmicutes,4IRC7@91061|Bacilli	91061|Bacilli	S	phenazine biosynthesis	-	-	5.3.3.17	ko:K06998	ko00405,ko01130,ko02024,map00405,map01130,map02024	M00835	-	-	ko00000,ko00001,ko00002,ko01000	-	-	-	PhzC-PhzF
BYD3_k127_7269313_2	471854.Dfer_1232	1.039e-91	309.0	COG1082@1|root,COG1082@2|Bacteria,4NIWS@976|Bacteroidetes,47K4W@768503|Cytophagia	976|Bacteroidetes	G	Xylose isomerase domain protein TIM barrel	-	-	-	-	-	-	-	-	-	-	-	-	AP_endonuc_2,AP_endonuc_2_N
BYD3_k127_7269313_4	742817.HMPREF9449_02566	4.694e-72	258.0	COG0628@1|root,COG0628@2|Bacteria,4NFHZ@976|Bacteroidetes	976|Bacteroidetes	F	permease	-	-	-	-	-	-	-	-	-	-	-	-	AI-2E_transport
BYD3_k127_7269313_5	1408473.JHXO01000010_gene3732	1.748e-27	123.0	COG3266@1|root,COG3266@2|Bacteria,4NMES@976|Bacteroidetes,2FU8B@200643|Bacteroidia	976|Bacteroidetes	S	domain, Protein	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_7269590_1	742817.HMPREF9449_01438	1.741e-59	216.0	COG4775@1|root,COG4775@2|Bacteria,4NDYT@976|Bacteroidetes,2FMTK@200643|Bacteroidia,22WRF@171551|Porphyromonadaceae	976|Bacteroidetes	M	CarboxypepD_reg-like domain	-	-	-	-	-	-	-	-	-	-	-	-	CarbopepD_reg_2
BYD3_k127_7269590_3	1492737.FEM08_01380	3.504e-46	175.0	28P39@1|root,2ZBNA@2|Bacteria,4NN3I@976|Bacteroidetes,1I7MJ@117743|Flavobacteriia	976|Bacteroidetes	S	Domain of unknown function (DUF5020)	-	-	-	-	-	-	-	-	-	-	-	-	DUF5020
BYD3_k127_7269590_5	762903.Pedsa_0039	1.207e-07	61.0	2EKSY@1|root,323RD@2|Bacteria,4NSZ0@976|Bacteroidetes,1ITC6@117747|Sphingobacteriia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_7269590_0	362418.IW19_04840	1.868e-94	314.0	COG0313@1|root,COG0313@2|Bacteria,4NFQM@976|Bacteroidetes,1HX5Y@117743|Flavobacteriia,2NSC7@237|Flavobacterium	976|Bacteroidetes	H	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA	rsmI	-	2.1.1.198	ko:K07056	-	-	-	-	ko00000,ko01000,ko03009	-	-	-	TP_methylase
BYD3_k127_7269590_2	1211813.CAPH01000006_gene1440	9.264e-56	202.0	COG1413@1|root,COG1413@2|Bacteria,4PMMF@976|Bacteroidetes,2G0K3@200643|Bacteroidia	976|Bacteroidetes	C	Domain of Unknown Function (DUF1080)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1080
BYD3_k127_7269590_4	338963.Pcar_0217	1.155e-21	100.0	COG1832@1|root,COG1832@2|Bacteria,1NJW8@1224|Proteobacteria,42WY1@68525|delta/epsilon subdivisions,2WT3S@28221|Deltaproteobacteria,43UZ1@69541|Desulfuromonadales	28221|Deltaproteobacteria	S	CoA binding domain	-	-	-	-	-	-	-	-	-	-	-	-	CoA_binding_2
BYD3_k127_7269590_6	435591.BDI_1080	3.026e-07	51.0	2DMZP@1|root,32UMQ@2|Bacteria,4P3H1@976|Bacteroidetes,2FT4E@200643|Bacteroidia,230IW@171551|Porphyromonadaceae	976|Bacteroidetes	S	Protein of unknown function (DUF3795)	-	-	-	-	-	-	-	-	-	-	-	-	DUF3795
BYD3_k127_7274347_3	1453500.AT05_08550	5.992e-34	153.0	COG1572@1|root,COG2911@1|root,COG1572@2|Bacteria,COG2911@2|Bacteria,4NIU0@976|Bacteroidetes,1HXV1@117743|Flavobacteriia	976|Bacteroidetes	S	Parallel beta-helix repeats	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_7274347_4	1499967.BAYZ01000123_gene2522	8.119e-23	116.0	COG4447@1|root,COG4447@2|Bacteria	2|Bacteria	S	cellulose binding	-	-	3.2.1.136	ko:K15924	-	-	-	-	ko00000,ko01000	-	GH5	-	CBM_3,Dockerin_1,Flg_new,Glyco_hydro_9
BYD3_k127_7274347_2	1349785.BAUG01000005_gene508	3.819e-50	206.0	COG3250@1|root,COG3250@2|Bacteria	2|Bacteria	G	beta-galactosidase activity	-	-	-	-	-	-	-	-	-	-	-	-	AbfB,ArabFuran-catal,BNR_2,Beta_helix,Bgal_small_N,Big_2,Cadherin-like,DUF4091,DUF5011,Esterase,F5_F8_type_C,LTD,Laminin_G_3,NPCBM,NPCBM_assoc,Pectate_lyase_3,SLH
BYD3_k127_7274347_5	504472.Slin_5315	2.972e-09	65.0	COG2067@1|root,COG2067@2|Bacteria,4PK2U@976|Bacteroidetes,47QDY@768503|Cytophagia	976|Bacteroidetes	I	long-chain fatty acid transport protein	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_7274347_1	869213.JCM21142_41902	8.631e-67	235.0	COG1596@1|root,COG1596@2|Bacteria,4NFXJ@976|Bacteroidetes,47Q2A@768503|Cytophagia	976|Bacteroidetes	M	Polysaccharide biosynthesis/export protein	wza	-	-	ko:K01991	ko02026,map02026	-	-	-	ko00000,ko00001,ko02000	1.B.18	-	-	Poly_export,SLBB
BYD3_k127_7274347_0	869213.JCM21142_41903	2.62e-144	479.0	COG0489@1|root,COG3206@1|root,COG0489@2|Bacteria,COG3206@2|Bacteria,4NEXU@976|Bacteroidetes,47JQC@768503|Cytophagia	976|Bacteroidetes	DM	TIGRFAM capsular exopolysaccharide family	-	-	-	-	-	-	-	-	-	-	-	-	AAA_31,CbiA,GNVR,Wzz
BYD3_k127_728127_0	1168289.AJKI01000027_gene1320	6.797e-166	553.0	COG1470@1|root,COG1470@2|Bacteria,4NFPN@976|Bacteroidetes,2FMUB@200643|Bacteroidia,3XKRX@558415|Marinilabiliaceae	976|Bacteroidetes	S	Carboxypeptidase regulatory-like domain	-	-	-	-	-	-	-	-	-	-	-	-	CarbopepD_reg_2
BYD3_k127_728127_2	1237149.C900_03262	5.045e-60	224.0	COG3468@1|root,COG3468@2|Bacteria,4NEVR@976|Bacteroidetes	976|Bacteroidetes	MU	outer membrane autotransporter barrel domain protein	-	-	-	-	-	-	-	-	-	-	-	-	OMP_b-brl_2
BYD3_k127_728127_1	1499967.BAYZ01000061_gene5977	1.305e-144	484.0	COG3292@1|root,COG4191@1|root,COG3292@2|Bacteria,COG4191@2|Bacteria,2NNZT@2323|unclassified Bacteria	2|Bacteria	T	Two component regulator propeller	-	-	-	-	-	-	-	-	-	-	-	-	HATPase_c,HisKA,HisKA_2,PAS_9,Reg_prop,Response_reg,Y_Y_Y
BYD3_k127_7317574_2	1123008.KB905707_gene1046	9.901e-137	447.0	COG0508@1|root,COG0508@2|Bacteria,4NF33@976|Bacteroidetes,2FRN0@200643|Bacteroidia,230BA@171551|Porphyromonadaceae	976|Bacteroidetes	C	2-oxoacid dehydrogenases acyltransferase (catalytic domain)	sucB	-	2.3.1.61	ko:K00658	ko00020,ko00310,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00310,map01100,map01110,map01120,map01130,map01200	M00009,M00011,M00032	R02570,R02571,R08549	RC00004,RC02727,RC02833	br01601,ko00000,ko00001,ko00002,ko01000	-	-	-	2-oxoacid_dh,Biotin_lipoyl,E3_binding
BYD3_k127_7317574_0	869213.JCM21142_93948	0.0	1248.0	COG0567@1|root,COG0567@2|Bacteria,4NEU9@976|Bacteroidetes,47JXI@768503|Cytophagia	976|Bacteroidetes	C	2-oxoglutarate dehydrogenase, E1	sucA	-	1.2.4.2	ko:K00164	ko00020,ko00310,ko00380,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00310,map00380,map01100,map01110,map01120,map01130,map01200	M00009,M00011,M00032	R00621,R01933,R01940,R03316,R08549	RC00004,RC00027,RC00627,RC02743,RC02833,RC02883	br01601,ko00000,ko00001,ko00002,ko01000	-	-	-	2-oxogl_dehyd_N,E1_dh,OxoGdeHyase_C,Transket_pyr
BYD3_k127_7317574_4	1168034.FH5T_00280	8.381e-126	413.0	COG3288@1|root,COG3288@2|Bacteria,4NGH1@976|Bacteroidetes,2G2N7@200643|Bacteroidia	976|Bacteroidetes	C	NAD(P)( ) transhydrogenase (AB-specific), alpha subunit	pntAA	-	1.6.1.2	ko:K00324	ko00760,ko01100,map00760,map01100	-	R00112	RC00001	ko00000,ko00001,ko01000	-	-	-	AlaDh_PNT_C,AlaDh_PNT_N
BYD3_k127_7317574_7	1408473.JHXO01000007_gene871	2.712e-39	149.0	COG3288@1|root,COG3288@2|Bacteria,4NT78@976|Bacteroidetes,2FU0R@200643|Bacteroidia	976|Bacteroidetes	C	Pyridine nucleotide transhydrogenase	pntA	-	1.6.1.2	ko:K00324	ko00760,ko01100,map00760,map01100	-	R00112	RC00001	ko00000,ko00001,ko01000	-	-	-	PNTB_4TM
BYD3_k127_7317574_1	485918.Cpin_6489	1.647e-144	471.0	COG1282@1|root,COG1282@2|Bacteria,4NHGZ@976|Bacteroidetes,1IPVT@117747|Sphingobacteriia	976|Bacteroidetes	C	The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane	pntB	-	1.6.1.2	ko:K00325	ko00760,ko01100,map00760,map01100	-	R00112	RC00001	ko00000,ko00001,ko01000	-	-	-	PNTB
BYD3_k127_7317574_3	468059.AUHA01000002_gene551	6.486e-131	424.0	COG0451@1|root,COG0451@2|Bacteria,4NIZG@976|Bacteroidetes,1IRDN@117747|Sphingobacteriia	976|Bacteroidetes	GM	Catalyzes the interconversion between ADP-D-glycero- beta-D-manno-heptose and ADP-L-glycero-beta-D-manno-heptose via an epimerization at carbon 6 of the heptose	hldD	-	5.1.3.20	ko:K03274	ko00540,ko01100,map00540,map01100	M00064	R05176	RC01291	ko00000,ko00001,ko00002,ko01000,ko01005	-	-	-	Epimerase
BYD3_k127_7317574_6	1408473.JHXO01000004_gene31	3.559e-49	183.0	COG0775@1|root,COG0775@2|Bacteria,4NQVQ@976|Bacteroidetes	976|Bacteroidetes	F	Catalyzes the hydrolysis of futalosine (FL) to dehypoxanthine futalosine (DHFL) and hypoxanthine, a step in the biosynthesis of menaquinone (MK, vitamin K2)	mqnB	-	3.2.2.26	ko:K11783	ko00130,ko01110,map00130,map01110	-	R08587	RC00063,RC00318	ko00000,ko00001,ko01000	-	-	-	PNP_UDP_1
BYD3_k127_7317574_5	1408813.AYMG01000001_gene3725	1.192e-87	294.0	COG0302@1|root,COG0302@2|Bacteria,4NFC2@976|Bacteroidetes,1IPBD@117747|Sphingobacteriia	976|Bacteroidetes	H	GTP cyclohydrolase	folE	GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0003933,GO:0003934,GO:0005488,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006066,GO:0006725,GO:0006729,GO:0006732,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009108,GO:0009987,GO:0016787,GO:0016810,GO:0016814,GO:0017076,GO:0017144,GO:0018130,GO:0019001,GO:0019238,GO:0019438,GO:0019751,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0034311,GO:0034312,GO:0034641,GO:0035639,GO:0036094,GO:0042558,GO:0042559,GO:0043167,GO:0043168,GO:0043169,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046146,GO:0046165,GO:0046173,GO:0046483,GO:0046872,GO:0046914,GO:0051186,GO:0051188,GO:0071704,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901615,GO:1901617	3.5.4.16	ko:K01495	ko00790,ko01100,map00790,map01100	M00126,M00841,M00842,M00843	R00428,R04639,R05046,R05048	RC00263,RC00294,RC00323,RC00945,RC01188	ko00000,ko00001,ko00002,ko01000	-	-	-	GTP_cyclohydroI
BYD3_k127_7317574_8	1121904.ARBP01000006_gene3846	4.938e-32	132.0	COG1238@1|root,COG1238@2|Bacteria,4NMW6@976|Bacteroidetes,47VDA@768503|Cytophagia	976|Bacteroidetes	I	metal cluster binding	-	-	-	-	-	-	-	-	-	-	-	-	SNARE_assoc
BYD3_k127_732340_3	509191.AEDB02000094_gene4239	2.762e-69	238.0	COG0507@1|root,COG0507@2|Bacteria,1V4EE@1239|Firmicutes,24PY9@186801|Clostridia,3WN79@541000|Ruminococcaceae	186801|Clostridia	L	HRDC domain	-	-	-	-	-	-	-	-	-	-	-	-	HRDC,PIF1
BYD3_k127_732340_4	1125863.JAFN01000001_gene2540	9.147e-59	212.0	2DN8B@1|root,32W2U@2|Bacteria,1R03I@1224|Proteobacteria,42XCH@68525|delta/epsilon subdivisions,2WT8A@28221|Deltaproteobacteria	28221|Deltaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_732340_5	643867.Ftrac_3111	5.791e-41	158.0	COG2353@1|root,COG2353@2|Bacteria,4NMWH@976|Bacteroidetes,47PZ0@768503|Cytophagia	976|Bacteroidetes	S	Belongs to the UPF0312 family	yceI	-	-	-	-	-	-	-	-	-	-	-	YceI
BYD3_k127_732340_1	1307761.L21SP2_2449	6.676e-157	507.0	COG0492@1|root,COG0492@2|Bacteria,2J7WA@203691|Spirochaetes	203691|Spirochaetes	C	Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family	-	-	1.8.1.9	ko:K00384	ko00450,map00450	-	R02016,R03596,R09372	RC00013,RC02518,RC02873	ko00000,ko00001,ko01000	-	-	-	Pyr_redox_2
BYD3_k127_732340_0	1307761.L21SP2_2450	2.105e-166	533.0	COG0641@1|root,COG0641@2|Bacteria,2JB1P@203691|Spirochaetes	203691|Spirochaetes	C	4Fe-4S single cluster domain	-	-	-	ko:K06871	-	-	-	-	ko00000	-	-	-	Fer4_12
BYD3_k127_732340_2	1307761.L21SP2_2452	1.58e-71	247.0	COG0500@1|root,COG2226@2|Bacteria,2J6Y1@203691|Spirochaetes	203691|Spirochaetes	Q	Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT)	-	-	2.1.1.137	ko:K07755	-	-	-	-	ko00000,ko01000	-	-	-	Methyltransf_31
BYD3_k127_7436683_1	927658.AJUM01000042_gene1722	0.0	1072.0	COG2353@1|root,COG2911@1|root,COG3210@1|root,COG2353@2|Bacteria,COG2911@2|Bacteria,COG3210@2|Bacteria,4PMJQ@976|Bacteroidetes,2G0DU@200643|Bacteroidia,3XM24@558415|Marinilabiliaceae	976|Bacteroidetes	U	Protein conserved in bacteria	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_7436683_3	886379.AEWI01000083_gene1597	2.351e-115	377.0	COG1082@1|root,COG1082@2|Bacteria,4NJ3Z@976|Bacteroidetes,2FNWR@200643|Bacteroidia,3XJ6B@558415|Marinilabiliaceae	976|Bacteroidetes	G	Xylose isomerase-like TIM barrel	-	-	-	-	-	-	-	-	-	-	-	-	AP_endonuc_2
BYD3_k127_7436683_4	313596.RB2501_12292	4.326e-102	342.0	COG1735@1|root,COG1735@2|Bacteria,4NJYF@976|Bacteroidetes,1I0TT@117743|Flavobacteriia	976|Bacteroidetes	S	Phosphotriesterase family	php	-	-	ko:K07048	-	-	-	-	ko00000	-	-	-	PTE
BYD3_k127_7436683_2	1279009.ADICEAN_01642	7.754e-145	464.0	COG0039@1|root,COG0039@2|Bacteria,4NEJ7@976|Bacteroidetes,47MD1@768503|Cytophagia	976|Bacteroidetes	C	Catalyzes the reversible oxidation of malate to oxaloacetate	mdh	-	1.1.1.37	ko:K00024	ko00020,ko00270,ko00620,ko00630,ko00680,ko00710,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00270,map00620,map00630,map00680,map00710,map00720,map01100,map01110,map01120,map01130,map01200	M00009,M00011,M00012,M00168,M00173,M00346,M00374,M00620,M00740	R00342,R07136	RC00031	ko00000,ko00001,ko00002,ko01000	-	-	-	Ldh_1_C,Ldh_1_N
BYD3_k127_7436683_6	1501391.LG35_02715	1.253e-66	232.0	COG1595@1|root,COG1595@2|Bacteria,4NF93@976|Bacteroidetes,2FNJV@200643|Bacteroidia,22V82@171550|Rikenellaceae	976|Bacteroidetes	K	Belongs to the sigma-70 factor family. ECF subfamily	rpoE	-	-	ko:K03088	-	-	-	-	ko00000,ko03021	-	-	-	Sigma70_r2,Sigma70_r4,Sigma70_r4_2
BYD3_k127_7436683_0	1408473.JHXO01000004_gene131	0.0	1332.0	COG0178@1|root,COG0178@2|Bacteria,4NEHM@976|Bacteroidetes,2FNFZ@200643|Bacteroidia	976|Bacteroidetes	L	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate	uvrA1	-	-	ko:K03701	ko03420,map03420	-	-	-	ko00000,ko00001,ko03400	-	-	-	AAA_21,ABC_tran
BYD3_k127_7436683_8	1380600.AUYN01000009_gene1739	2.827e-15	76.0	2AFHA@1|root,315HT@2|Bacteria,4NQ5F@976|Bacteroidetes,1I2SM@117743|Flavobacteriia	976|Bacteroidetes	S	S23 ribosomal protein	-	-	-	-	-	-	-	-	-	-	-	-	23S_rRNA_IVP
BYD3_k127_7436683_7	869213.JCM21142_3965	2.573e-34	136.0	2DXS6@1|root,34692@2|Bacteria,4P5EX@976|Bacteroidetes	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_7436683_5	927658.AJUM01000047_gene2831	1.981e-72	255.0	29N3N@1|root,32D2M@2|Bacteria,4NRTM@976|Bacteroidetes,2G223@200643|Bacteroidia,3XJ24@558415|Marinilabiliaceae	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_7486186_2	931626.Awo_c15890	1.804e-121	393.0	COG4422@1|root,COG4422@2|Bacteria,1TPP1@1239|Firmicutes,248RZ@186801|Clostridia,25W5Q@186806|Eubacteriaceae	186801|Clostridia	S	Protein of unknown function (DUF5131)	-	-	-	-	-	-	-	-	-	-	-	-	DUF5131
BYD3_k127_7486186_5	385682.AFSL01000073_gene1405	5.995e-88	303.0	COG3250@1|root,COG3250@2|Bacteria,4NN59@976|Bacteroidetes,2FQES@200643|Bacteroidia	976|Bacteroidetes	G	beta-galactosidase activity	-	-	-	-	-	-	-	-	-	-	-	-	BetaGal_dom4_5
BYD3_k127_7486186_4	945713.IALB_2692	8.008e-95	321.0	COG3250@1|root,COG3250@2|Bacteria	2|Bacteria	G	beta-galactosidase activity	-	-	3.1.1.53	ko:K05970	-	-	-	-	ko00000,ko01000	-	-	-	BetaGal_dom4_5,F5_F8_type_C
BYD3_k127_7486186_1	1121904.ARBP01000004_gene812	3.748e-123	411.0	COG0642@1|root,COG2205@2|Bacteria,4NUBB@976|Bacteroidetes	976|Bacteroidetes	T	GHKL domain	-	-	-	-	-	-	-	-	-	-	-	-	HATPase_c,HisKA
BYD3_k127_7486186_3	945713.IALB_2695	1.647e-95	317.0	COG0745@1|root,COG0745@2|Bacteria	945713.IALB_2695|-	T	phosphorelay signal transduction system	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_7486186_6	1356852.N008_09000	6.368e-52	196.0	COG1409@1|root,COG3419@1|root,COG1409@2|Bacteria,COG3419@2|Bacteria	2|Bacteria	NU	Tfp pilus assembly protein tip-associated adhesin	pilY1	-	3.1.3.2	ko:K02674,ko:K14379	ko00740,ko01100,ko04142,ko04380,ko05323,map00740,map01100,map04142,map04380,map05323	-	R00548	RC00017	ko00000,ko00001,ko01000,ko02035,ko02044	-	-	-	CarboxypepD_reg,Metallophos,Neisseria_PilC
BYD3_k127_7486186_7	1168034.FH5T_19355	4.283e-36	147.0	COG1387@1|root,COG1387@2|Bacteria,4NMBC@976|Bacteroidetes,2FNU7@200643|Bacteroidia	976|Bacteroidetes	E	Domain of Unknown Function (DUF1080)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1080
BYD3_k127_7486186_0	927658.AJUM01000022_gene1293	9.631e-312	966.0	28I0T@1|root,2Z85H@2|Bacteria,4NI9H@976|Bacteroidetes,2G2AY@200643|Bacteroidia,3XKQE@558415|Marinilabiliaceae	976|Bacteroidetes	S	Domain of unknown function (DUF4914)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4914
BYD3_k127_7550211_4	452637.Oter_1270	3.18e-103	342.0	COG2273@1|root,COG2273@2|Bacteria,46VNR@74201|Verrucomicrobia,3K8H4@414999|Opitutae	414999|Opitutae	G	glycoside hydrolase	-	-	-	-	-	-	-	-	-	-	-	-	Glyco_hydro_16
BYD3_k127_7550211_1	111780.Sta7437_4265	4.446e-159	510.0	COG1215@1|root,COG1215@2|Bacteria,1GCIQ@1117|Cyanobacteria,3VM6Z@52604|Pleurocapsales	1117|Cyanobacteria	M	transferase activity, transferring glycosyl groups	-	-	2.4.1.266	ko:K13693	-	-	-	-	ko00000,ko01000,ko01003	-	GT81	-	-
BYD3_k127_7550211_5	351160.RRC204	7.978e-90	306.0	COG0265@1|root,arCOG02833@2157|Archaea,2XT7Y@28890|Euryarchaeota,2NAWS@224756|Methanomicrobia	224756|Methanomicrobia	O	Trypsin	-	-	-	-	-	-	-	-	-	-	-	-	PDZ_2,Trypsin_2
BYD3_k127_7550211_6	1168034.FH5T_17710	6.772e-68	255.0	COG0683@1|root,COG1388@1|root,COG0683@2|Bacteria,COG1388@2|Bacteria,4NG96@976|Bacteroidetes,2FNR1@200643|Bacteroidia	976|Bacteroidetes	M	LysM domain protein	lysM	-	-	-	-	-	-	-	-	-	-	-	ANF_receptor,LysM,Peripla_BP_6
BYD3_k127_7550211_0	1191523.MROS_1422	1.386e-163	526.0	COG0415@1|root,COG0415@2|Bacteria	2|Bacteria	L	Belongs to the DNA photolyase family	phr	-	4.1.99.3	ko:K01669	-	-	-	-	ko00000,ko01000,ko03400	-	-	-	DNA_photolyase,FAD_binding_7
BYD3_k127_7550211_9	7668.SPU_001163-tr	3.959e-31	139.0	COG0666@1|root,KOG0504@2759|Eukaryota,KOG4177@2759|Eukaryota,38BVK@33154|Opisthokonta,3BGGV@33208|Metazoa,3CT1S@33213|Bilateria	33208|Metazoa	M	ankyrin 3, node of Ranvier (ankyrin G)	-	-	-	-	-	-	-	-	-	-	-	-	Ank,Ank_2,Ank_3,Ank_4,Ank_5,ZU5
BYD3_k127_7550211_10	385682.AFSL01000008_gene2591	7.649e-07	56.0	2EFJ6@1|root,339BJ@2|Bacteria,4NUYU@976|Bacteroidetes,2G1SM@200643|Bacteroidia,3XK3W@558415|Marinilabiliaceae	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_7550211_3	484018.BACPLE_02195	5.277e-109	361.0	COG0673@1|root,COG0673@2|Bacteria,4NFY3@976|Bacteroidetes,2FNBZ@200643|Bacteroidia,4AN2C@815|Bacteroidaceae	976|Bacteroidetes	S	Oxidoreductase, NAD-binding domain protein	-	-	-	-	-	-	-	-	-	-	-	-	GFO_IDH_MocA,GFO_IDH_MocA_C
BYD3_k127_7550211_2	1408473.JHXO01000011_gene3175	5.265e-129	422.0	COG0111@1|root,COG0111@2|Bacteria,4NGEB@976|Bacteroidetes,2FMMV@200643|Bacteroidia	976|Bacteroidetes	H	Catalyzes the oxidation of erythronate-4-phosphate to 3- hydroxy-2-oxo-4-phosphonooxybutanoate	pdxB	-	1.1.1.290	ko:K03473	ko00750,ko01100,map00750,map01100	M00124	R04210	RC00084	ko00000,ko00001,ko00002,ko01000	-	-	-	2-Hacid_dh,2-Hacid_dh_C,DUF3410
BYD3_k127_7550211_7	869213.JCM21142_477	7.036e-45	165.0	COG0362@1|root,COG0362@2|Bacteria,4NG05@976|Bacteroidetes,47NDJ@768503|Cytophagia	976|Bacteroidetes	G	Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH	gnd	-	1.1.1.343,1.1.1.44	ko:K00033	ko00030,ko00480,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map00480,map01100,map01110,map01120,map01130,map01200	M00004,M00006	R01528,R10221	RC00001,RC00539	ko00000,ko00001,ko00002,ko01000	-	-	-	6PGD,NAD_binding_2
BYD3_k127_7561351_2	1229276.DI53_2589	1.137e-37	156.0	COG2911@1|root,COG2911@2|Bacteria,4NF7F@976|Bacteroidetes,1IPAB@117747|Sphingobacteriia	976|Bacteroidetes	S	TamB, inner membrane protein subunit of TAM complex	-	-	-	-	-	-	-	-	-	-	-	-	TamB
BYD3_k127_7561351_0	1433126.BN938_1903	7.702e-141	454.0	COG0533@1|root,COG0533@2|Bacteria,4NE8E@976|Bacteroidetes,2FKZ9@200643|Bacteroidia,22U7V@171550|Rikenellaceae	976|Bacteroidetes	O	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction	tsaD	GO:0000408,GO:0002949,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0032991,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0070525,GO:0071704,GO:0090304,GO:1901360	2.3.1.234	ko:K01409	-	-	R10648	RC00070,RC00416	ko00000,ko01000,ko03016	-	-	-	Peptidase_M22
BYD3_k127_7561351_3	385682.AFSL01000003_gene1912	1.806e-29	122.0	2AD7J@1|root,312WH@2|Bacteria,4NR1A@976|Bacteroidetes,2G24U@200643|Bacteroidia,3XK3Q@558415|Marinilabiliaceae	976|Bacteroidetes	S	Domain of unknown function (DUF1987)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1987
BYD3_k127_7561351_1	886379.AEWI01000018_gene1314	3.138e-67	237.0	COG0628@1|root,COG0628@2|Bacteria,4NFHZ@976|Bacteroidetes,2FN2B@200643|Bacteroidia,3XJMB@558415|Marinilabiliaceae	976|Bacteroidetes	S	AI-2E family transporter	-	-	-	-	-	-	-	-	-	-	-	-	AI-2E_transport
BYD3_k127_758293_0	1267535.KB906767_gene4768	6.671e-121	410.0	2DBP2@1|root,2ZA71@2|Bacteria	2|Bacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_758293_2	1123392.AQWL01000008_gene1237	3.303e-19	102.0	COG3299@1|root,COG3299@2|Bacteria,1P3E0@1224|Proteobacteria,2VKDQ@28216|Betaproteobacteria	28216|Betaproteobacteria	S	cellulose binding	-	-	-	-	-	-	-	-	-	-	-	-	Baseplate_J,PA14
BYD3_k127_758293_1	1304872.JAGC01000009_gene33	1.026e-100	354.0	COG0642@1|root,COG4936@1|root,COG2205@2|Bacteria,COG4936@2|Bacteria,1NRP8@1224|Proteobacteria,42M0Y@68525|delta/epsilon subdivisions,2WIR4@28221|Deltaproteobacteria,2M7T3@213115|Desulfovibrionales	28221|Deltaproteobacteria	T	histidine kinase A domain protein	-	-	-	-	-	-	-	-	-	-	-	-	HATPase_c,HisKA,PAS_4,Response_reg
BYD3_k127_7593691_1	468059.AUHA01000006_gene2952	8.006e-230	733.0	COG0317@1|root,COG0317@2|Bacteria,4NESY@976|Bacteroidetes,1IQ2F@117747|Sphingobacteriia	976|Bacteroidetes	KT	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance	relA	-	2.7.6.5,3.1.7.2	ko:K00951,ko:K01139	ko00230,map00230	-	R00336,R00429	RC00002,RC00078	ko00000,ko00001,ko01000,ko03009	-	-	-	ACT_4,HD_4,RelA_SpoT,TGS
BYD3_k127_7593691_16	926562.Oweho_0686	2.172e-05	53.0	29VVY@1|root,30HDT@2|Bacteria,4PC32@976|Bacteroidetes,1ICTT@117743|Flavobacteriia,2PC4V@246874|Cryomorphaceae	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_7593691_8	717606.PaecuDRAFT_4702	7.039e-49	184.0	COG0546@1|root,COG0546@2|Bacteria,1V1FQ@1239|Firmicutes,4HDVJ@91061|Bacilli,26TUI@186822|Paenibacillaceae	91061|Bacilli	K	haloacid dehalogenase-like hydrolase	nt5e	-	3.1.3.18	ko:K01091	ko00630,ko01100,ko01110,ko01130,map00630,map01100,map01110,map01130	-	R01334	RC00017	ko00000,ko00001,ko01000	-	-	-	HAD_2
BYD3_k127_7593691_17	926559.JoomaDRAFT_2748	0.0002841	48.0	2EUNH@1|root,33N4C@2|Bacteria,4NXXI@976|Bacteroidetes,1I6Y4@117743|Flavobacteriia	976|Bacteroidetes	S	30S ribosomal protein Thx	-	-	-	-	-	-	-	-	-	-	-	-	Thx
BYD3_k127_7593691_3	1124780.ANNU01000019_gene1782	2.261e-155	499.0	COG0626@1|root,COG0626@2|Bacteria,4PKE6@976|Bacteroidetes,47KC8@768503|Cytophagia	976|Bacteroidetes	E	Catalyzes the formation of L-homocysteine from O- succinyl-L-homoserine (OSHS) and hydrogen sulfide	metZ	-	-	ko:K10764	ko00270,ko00920,ko01100,map00270,map00920,map01100	-	R01288	RC00020,RC02848	ko00000,ko00001,ko01000	-	-	-	Cys_Met_Meta_PP
BYD3_k127_7593691_0	1535422.ND16A_2603	9.659e-311	962.0	COG0365@1|root,COG0365@2|Bacteria,1MUF5@1224|Proteobacteria,1RMNZ@1236|Gammaproteobacteria,2Q5Y6@267889|Colwelliaceae	1224|Proteobacteria	I	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA	-	-	6.2.1.1	ko:K01895	ko00010,ko00620,ko00640,ko00680,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00620,map00640,map00680,map00720,map01100,map01110,map01120,map01130,map01200	M00357	R00235,R00236,R00316,R00926,R01354	RC00004,RC00012,RC00043,RC00070,RC02746,RC02816	ko00000,ko00001,ko00002,ko01000,ko01004	-	-	-	ACAS_N,AMP-binding,AMP-binding_C
BYD3_k127_7593691_6	96561.Dole_2121	2.658e-70	248.0	COG1313@1|root,COG1313@2|Bacteria,1NZAK@1224|Proteobacteria,42NYF@68525|delta/epsilon subdivisions,2WIT2@28221|Deltaproteobacteria,2MI2C@213118|Desulfobacterales	28221|Deltaproteobacteria	C	radical SAM domain protein	-	-	1.97.1.4	ko:K04070	-	-	-	-	ko00000,ko01000	-	-	-	Fer4_12,Radical_SAM
BYD3_k127_7593691_12	1313421.JHBV01000036_gene2442	1.456e-24	109.0	28P9K@1|root,2ZC31@2|Bacteria,4NPW6@976|Bacteroidetes,1IYXR@117747|Sphingobacteriia	976|Bacteroidetes	S	Domain of unknown function (DUF4252)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4252
BYD3_k127_7593691_14	1296415.JACC01000010_gene2086	2.411e-08	63.0	COG1413@1|root,COG1413@2|Bacteria,4NUQJ@976|Bacteroidetes,1I52N@117743|Flavobacteriia,2YH3F@290174|Aquimarina	976|Bacteroidetes	C	lyase activity	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_7593691_11	1123277.KB893190_gene4920	3.735e-38	149.0	COG1595@1|root,COG1595@2|Bacteria,4NMJ7@976|Bacteroidetes,47PC1@768503|Cytophagia	976|Bacteroidetes	K	Sigma-70, region 4	-	-	-	ko:K03088	-	-	-	-	ko00000,ko03021	-	-	-	Sigma70_r2,Sigma70_r4_2
BYD3_k127_7593691_13	1042376.AFPK01000072_gene1741	1.149e-14	80.0	2CC1H@1|root,33P9C@2|Bacteria	2|Bacteria	S	Domain of unknown function (DUF4252)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4252
BYD3_k127_7593691_9	1122176.KB903539_gene1307	1.114e-47	181.0	COG2834@1|root,COG2834@2|Bacteria,4NHV3@976|Bacteroidetes,1IZ7F@117747|Sphingobacteriia	976|Bacteroidetes	M	Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4292,LolA_like
BYD3_k127_7593691_5	869213.JCM21142_93308	1.194e-103	343.0	COG0300@1|root,COG0300@2|Bacteria,4NEMK@976|Bacteroidetes,47JGN@768503|Cytophagia	976|Bacteroidetes	S	Belongs to the short-chain dehydrogenases reductases (SDR) family	-	-	-	-	-	-	-	-	-	-	-	-	adh_short
BYD3_k127_7593691_10	860228.Ccan_08370	6.446e-43	160.0	COG0824@1|root,COG0824@2|Bacteria,4NQGW@976|Bacteroidetes,1I2UT@117743|Flavobacteriia,1ERUM@1016|Capnocytophaga	976|Bacteroidetes	S	Acyl-CoA thioester hydrolase, YbgC YbaW family	ybgC	-	-	ko:K07107	-	-	-	-	ko00000,ko01000	-	-	-	4HBT,4HBT_2
BYD3_k127_7593691_2	742767.HMPREF9456_03117	1.202e-187	594.0	COG2256@1|root,COG2256@2|Bacteria,4NEV8@976|Bacteroidetes,2FNF4@200643|Bacteroidia,22W72@171551|Porphyromonadaceae	976|Bacteroidetes	L	ATPase (AAA	rarA	-	-	ko:K07478	-	-	-	-	ko00000	-	-	-	AAA,AAA_assoc_2,MgsA_C,RuvB_N
BYD3_k127_7593691_4	1358423.N180_16475	4.675e-121	393.0	COG2877@1|root,COG2877@2|Bacteria,4NENN@976|Bacteroidetes,1IVW9@117747|Sphingobacteriia	976|Bacteroidetes	H	Belongs to the KdsA family	kdsA	-	2.5.1.55	ko:K01627	ko00540,ko01100,map00540,map01100	M00063	R03254	RC00435	ko00000,ko00001,ko00002,ko01000,ko01005	-	-	-	DAHP_synth_1
BYD3_k127_7593691_7	1286632.P278_14550	1.409e-56	215.0	COG0745@1|root,COG2114@1|root,COG5002@1|root,COG0745@2|Bacteria,COG2114@2|Bacteria,COG5002@2|Bacteria,4P0IA@976|Bacteroidetes,1I039@117743|Flavobacteriia	976|Bacteroidetes	T	Adenylyl- / guanylyl cyclase, catalytic domain	-	-	-	-	-	-	-	-	-	-	-	-	CHASE3,Guanylate_cyc,HATPase_c,HisKA,PAS_3,PAS_4,PAS_9,Response_reg,TPR_12
BYD3_k127_7594746_3	1121481.AUAS01000005_gene1866	1.876e-43	168.0	COG3595@1|root,COG3595@2|Bacteria,4NKSN@976|Bacteroidetes,47M8H@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	DUF4097
BYD3_k127_7594746_4	1185876.BN8_02185	1.419e-31	131.0	COG3595@1|root,COG3595@2|Bacteria,4NGHY@976|Bacteroidetes,47MCH@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_7594746_0	307480.IW16_22635	8.249e-103	340.0	COG0596@1|root,COG0596@2|Bacteria,4NUH1@976|Bacteroidetes,1IIHX@117743|Flavobacteriia,3ZQVJ@59732|Chryseobacterium	976|Bacteroidetes	S	Alpha/beta hydrolase family	-	-	-	-	-	-	-	-	-	-	-	-	Abhydrolase_1,Abhydrolase_6
BYD3_k127_7594746_1	1317122.ATO12_19990	1.693e-76	275.0	COG1680@1|root,COG1729@1|root,COG1680@2|Bacteria,COG1729@2|Bacteria,4NI1Z@976|Bacteroidetes,1HYQF@117743|Flavobacteriia,2YK9G@290174|Aquimarina	976|Bacteroidetes	V	Domain of unknown function (DUF3471)	-	-	-	-	-	-	-	-	-	-	-	-	Beta-lactamase,DUF3471,SusF_SusE
BYD3_k127_7594746_2	1158294.JOMI01000001_gene1446	6.201e-59	208.0	COG0454@1|root,COG0456@2|Bacteria,4NTRS@976|Bacteroidetes,2FS7C@200643|Bacteroidia	976|Bacteroidetes	K	acetyltransferase	-	-	-	-	-	-	-	-	-	-	-	-	DinB_2
BYD3_k127_7594746_5	1408813.AYMG01000025_gene2703	5.273e-21	93.0	COG2378@1|root,COG2378@2|Bacteria,4NHIC@976|Bacteroidetes	976|Bacteroidetes	K	transcriptional regulator	-	-	-	-	-	-	-	-	-	-	-	-	HTH_11,WYL
BYD3_k127_7618862_1	694427.Palpr_2170	2.126e-208	683.0	COG0642@1|root,COG0745@1|root,COG2770@1|root,COG3437@1|root,COG3605@1|root,COG0745@2|Bacteria,COG2205@2|Bacteria,COG2770@2|Bacteria,COG3437@2|Bacteria,COG3605@2|Bacteria,4NDXU@976|Bacteroidetes,2FM06@200643|Bacteroidia,22XHH@171551|Porphyromonadaceae	976|Bacteroidetes	T	Histidine kinase-like ATPases	-	-	2.7.13.3	ko:K20971,ko:K20974	ko02020,ko02025,map02020,map02025	M00820	-	-	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	-	-	-	7TMR-DISM_7TM,GAF,HATPase_c,HisKA,Hpt,PAS,PAS_3,PAS_4,PAS_9,Response_reg,TPR_12,TPR_8
BYD3_k127_7618862_5	177437.HRM2_33390	5.573e-23	114.0	COG3437@1|root,COG3437@2|Bacteria,1MUB8@1224|Proteobacteria,42QB7@68525|delta/epsilon subdivisions,2WM6Y@28221|Deltaproteobacteria,2MHYS@213118|Desulfobacterales	28221|Deltaproteobacteria	T	metal-dependent phosphohydrolase HD region	-	-	-	ko:K07814	-	-	-	-	ko00000,ko02022	-	-	-	HD,HD_5,Response_reg
BYD3_k127_7618862_3	290317.Cpha266_2350	1.37e-97	340.0	COG5002@1|root,COG5002@2|Bacteria	2|Bacteria	T	protein histidine kinase activity	-	-	-	-	-	-	-	-	-	-	-	-	HATPase_c,HisKA,PAS_9,Response_reg
BYD3_k127_7618862_8	1042376.AFPK01000018_gene1688	1.294e-10	70.0	COG0664@1|root,COG0745@1|root,COG0664@2|Bacteria,COG0745@2|Bacteria,4NFB1@976|Bacteroidetes,1HY0Y@117743|Flavobacteriia,406YC@61432|unclassified Flavobacteriaceae	976|Bacteroidetes	T	Cyclic nucleotide-monophosphate binding domain	crp	-	-	-	-	-	-	-	-	-	-	-	HTH_Crp_2,Response_reg,cNMP_binding
BYD3_k127_7618862_7	877421.AUJT01000023_gene2138	1.339e-20	95.0	COG3437@1|root,COG3437@2|Bacteria,1UQJH@1239|Firmicutes,248UM@186801|Clostridia,27KUV@186928|unclassified Lachnospiraceae	186801|Clostridia	KT	HD domain	-	-	-	ko:K07814	-	-	-	-	ko00000,ko02022	-	-	-	HD,HD_5,Response_reg
BYD3_k127_7618862_4	589865.DaAHT2_0992	7.874e-26	126.0	COG0784@1|root,COG4191@1|root,COG0784@2|Bacteria,COG4191@2|Bacteria,1RCM9@1224|Proteobacteria,42M1R@68525|delta/epsilon subdivisions,2WK3J@28221|Deltaproteobacteria,2MI5F@213118|Desulfobacterales	28221|Deltaproteobacteria	T	histidine kinase A domain protein	-	-	-	-	-	-	-	-	-	-	-	-	HATPase_c,HisKA,PAS,PAS_3,PAS_4,PAS_8,PAS_9,Response_reg
BYD3_k127_7618862_2	1168034.FH5T_12615	3.031e-130	454.0	COG0642@1|root,COG5002@1|root,COG2205@2|Bacteria,COG5002@2|Bacteria,4NDXU@976|Bacteroidetes,2FM06@200643|Bacteroidia	976|Bacteroidetes	T	Psort location CytoplasmicMembrane, score	-	-	-	-	-	-	-	-	-	-	-	-	HATPase_c,HisKA,PAS_3,PAS_4,PAS_9,Response_reg
BYD3_k127_7618862_6	153721.MYP_2615	2.107e-21	106.0	COG3209@1|root,COG3291@1|root,COG3209@2|Bacteria,COG3291@2|Bacteria,4PKNM@976|Bacteroidetes,47XXK@768503|Cytophagia	976|Bacteroidetes	M	C-terminal domain of CHU protein family	-	-	-	-	-	-	-	-	-	-	-	-	CHU_C
BYD3_k127_7618862_0	1168289.AJKI01000006_gene243	9.326e-314	1035.0	COG1404@1|root,COG2353@1|root,COG3209@1|root,COG3210@1|root,COG5492@1|root,COG1404@2|Bacteria,COG2353@2|Bacteria,COG3209@2|Bacteria,COG3210@2|Bacteria,COG5492@2|Bacteria,4PNR0@976|Bacteroidetes,2FNS2@200643|Bacteroidia,3XJMD@558415|Marinilabiliaceae	976|Bacteroidetes	NU	COG3209 Rhs family protein	-	-	-	-	-	-	-	-	-	-	-	-	DUF1735,Laminin_G_3
BYD3_k127_7632406_4	945713.IALB_0031	1.775e-25	111.0	COG4319@1|root,COG4319@2|Bacteria	2|Bacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	DUF4440,SnoaL_2
BYD3_k127_7632406_2	227377.CBU_0773	1.618e-46	173.0	COG2764@1|root,COG2764@2|Bacteria,1RF5T@1224|Proteobacteria,1S5YT@1236|Gammaproteobacteria,1JF2S@118969|Legionellales	118969|Legionellales	S	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily	-	-	-	ko:K04750	-	-	-	-	ko00000	-	-	-	Glyoxalase
BYD3_k127_7632406_5	459349.CLOAM1811	8.992e-11	72.0	COG2866@1|root,COG4412@1|root,COG2866@2|Bacteria,COG4412@2|Bacteria,2NPI7@2323|unclassified Bacteria	2|Bacteria	E	Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology	-	-	3.4.17.18,3.4.17.22	ko:K05996,ko:K06987,ko:K07752	-	-	-	-	ko00000,ko01000,ko01002	-	-	-	CarboxypepD_reg,DUF4859,FlgD_ig,Peptidase_M14
BYD3_k127_7632406_6	391603.FBALC1_08018	7.138e-05	47.0	COG2374@1|root,COG2374@2|Bacteria,4NT6S@976|Bacteroidetes,1I4XN@117743|Flavobacteriia	976|Bacteroidetes	O	Belongs to the peptidase S8 family	-	-	-	-	-	-	-	-	-	-	-	-	Big_5,SprB
BYD3_k127_7632406_0	694427.Palpr_2915	3.773e-90	321.0	COG2202@1|root,COG4585@1|root,COG2202@2|Bacteria,COG4585@2|Bacteria,4NI65@976|Bacteroidetes,2FRZ7@200643|Bacteroidia,22YG2@171551|Porphyromonadaceae	976|Bacteroidetes	T	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase	-	-	-	-	-	-	-	-	-	-	-	-	HATPase_c,HisKA_3,PAS,PAS_3,PAS_9,PocR,TPR_12,TPR_8
BYD3_k127_7632406_1	153721.MYP_3270	1.346e-79	271.0	COG1595@1|root,COG1595@2|Bacteria,4NEHC@976|Bacteroidetes,47UI8@768503|Cytophagia	976|Bacteroidetes	K	Sigma-70, region 4	-	-	-	ko:K03088	-	-	-	-	ko00000,ko03021	-	-	-	Sigma70_r2,Sigma70_r4_2
BYD3_k127_7632406_3	1121373.KB903635_gene835	1.382e-44	166.0	2BVXR@1|root,32QYG@2|Bacteria,4NQMX@976|Bacteroidetes,47V7M@768503|Cytophagia	976|Bacteroidetes	S	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase	-	-	-	-	-	-	-	-	-	-	-	-	DoxX
BYD3_k127_763630_7	1408473.JHXO01000005_gene1789	1.028e-44	170.0	28P2C@1|root,2ZBYG@2|Bacteria,4NMEQ@976|Bacteroidetes,2FVCT@200643|Bacteroidia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_763630_1	153721.MYP_4777	3.706e-117	395.0	COG5316@1|root,COG5316@2|Bacteria,4NGER@976|Bacteroidetes,47MYA@768503|Cytophagia	976|Bacteroidetes	S	N-terminal domain of unknown function (DUF4140)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4139,DUF4140
BYD3_k127_763630_9	272563.CD630_25720	3.757e-25	113.0	COG0778@1|root,COG0778@2|Bacteria,1V2D6@1239|Firmicutes,25B91@186801|Clostridia	186801|Clostridia	C	PFAM Nitroreductase	-	-	-	-	-	-	-	-	-	-	-	-	Nitroreductase
BYD3_k127_763630_3	869213.JCM21142_455	4.61e-73	255.0	COG1352@1|root,COG1352@2|Bacteria,4NFDS@976|Bacteroidetes,47JV5@768503|Cytophagia	976|Bacteroidetes	NT	PFAM MCP methyltransferase CheR-type	cheR	-	2.1.1.80	ko:K00575	ko02020,ko02030,map02020,map02030	-	-	-	ko00000,ko00001,ko01000,ko02035	-	-	-	CheR,CheR_N
BYD3_k127_763630_5	1237149.C900_01354	2.205e-62	240.0	COG2203@1|root,COG2203@2|Bacteria,4NICW@976|Bacteroidetes,47NI3@768503|Cytophagia	976|Bacteroidetes	T	Domain present in phytochromes and cGMP-specific phosphodiesterases.	-	-	-	-	-	-	-	-	-	-	-	-	GAF_2,PAS_9
BYD3_k127_763630_6	643867.Ftrac_3733	1.799e-48	183.0	COG1352@1|root,COG1352@2|Bacteria,4NFDS@976|Bacteroidetes,47JV5@768503|Cytophagia	976|Bacteroidetes	NT	PFAM MCP methyltransferase CheR-type	-	-	2.1.1.80	ko:K00575	ko02020,ko02030,map02020,map02030	-	-	-	ko00000,ko00001,ko01000,ko02035	-	-	-	CheR,CheR_N
BYD3_k127_763630_2	313606.M23134_00461	7.099e-77	261.0	COG2201@1|root,COG2201@2|Bacteria,4NNR3@976|Bacteroidetes,47PAB@768503|Cytophagia	976|Bacteroidetes	NT	CheB methylesterase	-	-	3.1.1.61,3.5.1.44	ko:K03412	ko02020,ko02030,map02020,map02030	M00506	-	-	ko00000,ko00001,ko00002,ko01000,ko02022,ko02035	-	-	-	CheB_methylest
BYD3_k127_763630_10	643867.Ftrac_3736	1.177e-15	86.0	COG3605@1|root,COG3605@2|Bacteria,4P41N@976|Bacteroidetes,47VIK@768503|Cytophagia	976|Bacteroidetes	T	GAF domain	-	-	-	-	-	-	-	-	-	-	-	-	GAF_2
BYD3_k127_763630_0	927658.AJUM01000037_gene1988	7.424e-248	792.0	COG2202@1|root,COG2203@1|root,COG2208@1|root,COG2202@2|Bacteria,COG2203@2|Bacteria,COG2208@2|Bacteria,4NIXZ@976|Bacteroidetes,2FYT8@200643|Bacteroidia,3XJF9@558415|Marinilabiliaceae	976|Bacteroidetes	T	Domain present in phytochromes and cGMP-specific phosphodiesterases.	-	-	-	-	-	-	-	-	-	-	-	-	GAF_2,HAMP,PAS,PAS_4,PAS_9,SpoIIE
BYD3_k127_763630_4	385682.AFSL01000008_gene2587	1.543e-64	226.0	2AAU0@1|root,3106Q@2|Bacteria,4NNSV@976|Bacteroidetes,2G1MU@200643|Bacteroidia,3XISW@558415|Marinilabiliaceae	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_763630_8	385682.AFSL01000008_gene2588	8.612e-39	147.0	2CEYK@1|root,31W5M@2|Bacteria,4NQEQ@976|Bacteroidetes,2G265@200643|Bacteroidia,3XK2K@558415|Marinilabiliaceae	976|Bacteroidetes	S	Domain of unknown function (DUF1987)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1987
BYD3_k127_7648221_1	1087481.AGFX01000018_gene1796	1.601e-42	178.0	COG1404@1|root,COG4733@1|root,COG5492@1|root,COG1404@2|Bacteria,COG4733@2|Bacteria,COG5492@2|Bacteria,1UI3P@1239|Firmicutes,4HJMZ@91061|Bacilli,27713@186822|Paenibacillaceae	91061|Bacilli	GN	S-layer homology domain	-	-	3.4.21.96	ko:K01361	-	-	-	-	ko00000,ko01000,ko01002,ko03110	-	-	-	Big_2,CBM_X2,Cadherin-like,LRR_5,PA,Peptidase_S8,SLH,fn3_5
BYD3_k127_7648221_0	585543.HMPREF0969_01303	1.155e-113	377.0	COG1672@1|root,COG1672@2|Bacteria,4P0JT@976|Bacteroidetes,2FPQZ@200643|Bacteroidia,4AT9S@815|Bacteroidaceae	976|Bacteroidetes	S	ATPase domain predominantly from Archaea	-	-	-	-	-	-	-	-	-	-	-	-	ATPase_2
BYD3_k127_7648733_3	595460.RRSWK_00671	1.747e-08	56.0	COG1244@1|root,COG1244@2|Bacteria,2IX1W@203682|Planctomycetes	203682|Planctomycetes	S	Elongator protein 3, MiaB family, Radical SAM	-	-	-	ko:K06936	-	-	-	-	ko00000	-	-	-	-
BYD3_k127_7648733_2	1210884.HG799464_gene10450	4.83e-15	76.0	COG1244@1|root,COG1244@2|Bacteria,2IX1W@203682|Planctomycetes	203682|Planctomycetes	S	Elongator protein 3, MiaB family, Radical SAM	-	-	-	ko:K06936	-	-	-	-	ko00000	-	-	-	-
BYD3_k127_7648733_1	595460.RRSWK_00671	1.11e-63	225.0	COG1244@1|root,COG1244@2|Bacteria,2IX1W@203682|Planctomycetes	203682|Planctomycetes	S	Elongator protein 3, MiaB family, Radical SAM	-	-	-	ko:K06936	-	-	-	-	ko00000	-	-	-	-
BYD3_k127_7648733_0	344747.PM8797T_28489	3.95e-179	571.0	COG0367@1|root,COG0367@2|Bacteria,2IYMU@203682|Planctomycetes	203682|Planctomycetes	E	Asparagine synthase	-	-	6.3.5.4	ko:K01953	ko00250,ko01100,ko01110,map00250,map01100,map01110	-	R00578	RC00010	ko00000,ko00001,ko01000,ko01002	-	-	-	Asn_synthase
BYD3_k127_7651693_18	926562.Oweho_3011	3.687e-55	198.0	COG2143@1|root,COG2143@2|Bacteria,4PJYZ@976|Bacteroidetes,1ID1F@117743|Flavobacteriia,2PBWE@246874|Cryomorphaceae	976|Bacteroidetes	O	Protein of unknown function, DUF255	-	-	-	-	-	-	-	-	-	-	-	-	Thioredox_DsbH
BYD3_k127_7651693_25	1408473.JHXO01000011_gene3048	7.058e-35	147.0	28M15@1|root,2ZAG0@2|Bacteria,4NMZB@976|Bacteroidetes,2G2G6@200643|Bacteroidia	976|Bacteroidetes	S	Domain of unknown function (DUF4831)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4831
BYD3_k127_7651693_3	1408473.JHXO01000011_gene3047	1.418e-158	515.0	COG0062@1|root,COG0063@1|root,COG0062@2|Bacteria,COG0063@2|Bacteria,4NG2F@976|Bacteroidetes,2FQ4K@200643|Bacteroidia	976|Bacteroidetes	H	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration	nnrD	-	4.2.1.136,5.1.99.6	ko:K17758,ko:K17759	-	-	-	-	ko00000,ko01000	-	-	-	Carb_kinase,YjeF_N
BYD3_k127_7651693_12	1173027.Mic7113_2453	5.768e-78	290.0	COG2202@1|root,COG2203@1|root,COG4251@1|root,COG2202@2|Bacteria,COG2203@2|Bacteria,COG4251@2|Bacteria,1G2QC@1117|Cyanobacteria,1HH4R@1150|Oscillatoriales	1117|Cyanobacteria	T	Domain of unknown function (DUF4118)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4118,HATPase_c,HisKA,PAS,PAS_3,PAS_4,PAS_9
BYD3_k127_7651693_13	1094980.Mpsy_2044	1.466e-70	258.0	COG0642@1|root,COG0784@1|root,arCOG02376@1|root,arCOG02376@2157|Archaea,arCOG02386@2157|Archaea,arCOG06192@2157|Archaea,2Y7ZM@28890|Euryarchaeota	28890|Euryarchaeota	T	His Kinase A (phosphoacceptor) domain	-	-	-	-	-	-	-	-	-	-	-	-	HATPase_c,HisKA
BYD3_k127_7651693_22	946077.W5A_07942	5.586e-39	154.0	COG3595@1|root,COG3595@2|Bacteria,4NIA2@976|Bacteroidetes,1I0CY@117743|Flavobacteriia	976|Bacteroidetes	S	Putative auto-transporter adhesin, head GIN domain	-	-	-	-	-	-	-	-	-	-	-	-	DUF2807
BYD3_k127_7651693_0	927658.AJUM01000017_gene3126	6.931e-316	981.0	COG2183@1|root,COG2183@2|Bacteria,4NETD@976|Bacteroidetes,2FMAZ@200643|Bacteroidia,3XIZM@558415|Marinilabiliaceae	976|Bacteroidetes	K	Tex-like protein N-terminal domain	yhgF	-	-	ko:K06959	-	-	-	-	ko00000	-	-	-	HHH_3,S1,Tex_N,Tex_YqgF
BYD3_k127_7651693_4	445970.ALIPUT_02789	2.25e-155	493.0	COG0568@1|root,COG0568@2|Bacteria,4NEBF@976|Bacteroidetes,2FNVQ@200643|Bacteroidia,22U3R@171550|Rikenellaceae	976|Bacteroidetes	K	Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released	rpoD	-	-	ko:K03086	-	-	-	-	ko00000,ko03021	-	-	-	Sigma70_r1_2,Sigma70_r2,Sigma70_r3,Sigma70_r4
BYD3_k127_7651693_5	1168289.AJKI01000035_gene3580	6.42e-143	467.0	COG0265@1|root,COG0265@2|Bacteria,4NFCS@976|Bacteroidetes,2FMUA@200643|Bacteroidia,3XJ0M@558415|Marinilabiliaceae	976|Bacteroidetes	O	Trypsin	htrA	-	-	-	-	-	-	-	-	-	-	-	PDZ_1,PDZ_2,Trypsin_2
BYD3_k127_7651693_2	1408473.JHXO01000009_gene3444	1.211e-215	676.0	COG3669@1|root,COG3669@2|Bacteria,4NE74@976|Bacteroidetes,2FPVW@200643|Bacteroidia	976|Bacteroidetes	G	Alpha-L-fucosidase	fucA	-	3.2.1.51	ko:K01206	ko00511,map00511	-	-	-	ko00000,ko00001,ko01000,ko04147	-	GH29	-	Alpha_L_fucos
BYD3_k127_7651693_17	1005048.CFU_1881	4.291e-56	202.0	COG1611@1|root,COG1611@2|Bacteria,1RD59@1224|Proteobacteria,2VRA6@28216|Betaproteobacteria,473BN@75682|Oxalobacteraceae	28216|Betaproteobacteria	S	Belongs to the LOG family	yvdD_1	-	3.2.2.10	ko:K06966	ko00230,ko00240,map00230,map00240	-	R00182,R00510	RC00063,RC00318	ko00000,ko00001,ko01000	-	-	-	Lysine_decarbox
BYD3_k127_7651693_26	1453498.LG45_09350	3.428e-30	124.0	2CG1Y@1|root,333IH@2|Bacteria,4NVMK@976|Bacteroidetes,1I9TA@117743|Flavobacteriia,2NWI3@237|Flavobacterium	976|Bacteroidetes	S	Protein of unknown function (DUF1573)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1573
BYD3_k127_7651693_19	1168034.FH5T_02815	6.659e-52	190.0	COG1309@1|root,COG1309@2|Bacteria,4NIBT@976|Bacteroidetes,2FU2E@200643|Bacteroidia	976|Bacteroidetes	K	Bacterial regulatory proteins, tetR family	-	-	-	-	-	-	-	-	-	-	-	-	TetR_N
BYD3_k127_7651693_15	1408473.JHXO01000006_gene1349	2.194e-66	242.0	COG1538@1|root,COG1538@2|Bacteria,4NFSW@976|Bacteroidetes,2FNYU@200643|Bacteroidia	976|Bacteroidetes	MU	Outer membrane efflux protein	-	-	-	-	-	-	-	-	-	-	-	-	OEP
BYD3_k127_7651693_10	1408473.JHXO01000006_gene1350	8.14e-86	293.0	COG1566@1|root,COG1566@2|Bacteria,4PKPZ@976|Bacteroidetes,2G0E5@200643|Bacteroidia	976|Bacteroidetes	V	Barrel-sandwich domain of CusB or HlyD membrane-fusion	-	-	-	ko:K01993	-	-	-	-	ko00000	-	-	-	Biotin_lipoyl_2,HlyD_3,HlyD_D23
BYD3_k127_7651693_9	700598.Niako_4471	1.701e-98	330.0	COG1131@1|root,COG1131@2|Bacteria,4NFW9@976|Bacteroidetes,1IQRB@117747|Sphingobacteriia	976|Bacteroidetes	V	PFAM ABC transporter	-	-	-	ko:K01990	-	M00254	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	ABC_tran
BYD3_k127_7651693_8	485918.Cpin_2918	2.066e-108	355.0	COG1131@1|root,COG1131@2|Bacteria,4NFW9@976|Bacteroidetes,1INYX@117747|Sphingobacteriia	976|Bacteroidetes	V	ABC transporter	-	-	-	ko:K01990	-	M00254	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	ABC_tran
BYD3_k127_7651693_6	1168034.FH5T_02845	5.363e-130	424.0	COG0842@1|root,COG0842@2|Bacteria,4NDU0@976|Bacteroidetes,2FMJ3@200643|Bacteroidia	976|Bacteroidetes	V	Transport permease protein	ybhS	-	-	ko:K01992	-	M00254	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	ABC2_membrane_3
BYD3_k127_7651693_7	1168034.FH5T_02855	2.203e-112	374.0	COG0842@1|root,COG0842@2|Bacteria,4NFM0@976|Bacteroidetes,2FMNV@200643|Bacteroidia	976|Bacteroidetes	V	ABC-2 type transporter	-	-	-	ko:K01992	-	M00254	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	ABC2_membrane_3
BYD3_k127_7651693_14	926549.KI421517_gene381	3.027e-69	246.0	COG0226@1|root,COG0226@2|Bacteria,4NH1N@976|Bacteroidetes,47NNB@768503|Cytophagia	976|Bacteroidetes	P	PBP superfamily domain	-	-	-	ko:K02040	ko02010,ko02020,ko05152,map02010,map02020,map05152	M00222	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.7	-	-	PBP_like_2
BYD3_k127_7651693_20	714943.Mucpa_3131	9.735e-45	183.0	COG0457@1|root,COG0457@2|Bacteria,4NIEU@976|Bacteroidetes,1IPR2@117747|Sphingobacteriia	976|Bacteroidetes	NU	PFAM Tetratricopeptide	-	-	-	-	-	-	-	-	-	-	-	-	TPR_16,TPR_19,TPR_2,TPR_8
BYD3_k127_7651693_11	1121957.ATVL01000010_gene506	5.119e-83	283.0	COG0811@1|root,COG0811@2|Bacteria,4NE8M@976|Bacteroidetes,47MMA@768503|Cytophagia	976|Bacteroidetes	U	MotA TolQ ExbB proton channel	exbB	-	-	ko:K03561	-	-	-	-	ko00000,ko02000	1.A.30.2.1	-	-	MotA_ExbB
BYD3_k127_7651693_24	926549.KI421517_gene377	5.326e-38	150.0	COG0848@1|root,COG0848@2|Bacteria,4NMT4@976|Bacteroidetes,47NTX@768503|Cytophagia	976|Bacteroidetes	U	PFAM Biopolymer transport protein ExbD TolR	exbD1	-	-	-	-	-	-	-	-	-	-	-	ExbD
BYD3_k127_7651693_23	742725.HMPREF9450_01359	1.28e-38	152.0	COG0848@1|root,COG0848@2|Bacteria,4NMQ8@976|Bacteroidetes,2FM45@200643|Bacteroidia	976|Bacteroidetes	U	PFAM Biopolymer transport protein ExbD TolR	exbD2	-	-	-	-	-	-	-	-	-	-	-	ExbD
BYD3_k127_7651693_21	649349.Lbys_3214	1.464e-39	157.0	COG0810@1|root,COG0810@2|Bacteria,4NFH6@976|Bacteroidetes,47XHA@768503|Cytophagia	976|Bacteroidetes	M	Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins	-	-	-	ko:K03832	-	-	-	-	ko00000,ko02000	2.C.1.1	-	-	TonB_C
BYD3_k127_7651693_1	411476.BACOVA_02616	2.39e-235	745.0	COG0272@1|root,COG0272@2|Bacteria,4NE2X@976|Bacteroidetes,2FKZZ@200643|Bacteroidia,4AKM9@815|Bacteroidaceae	976|Bacteroidetes	L	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA	ligA	GO:0003674,GO:0003824,GO:0003909,GO:0003911,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006266,GO:0006281,GO:0006284,GO:0006288,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016874,GO:0016886,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050896,GO:0051103,GO:0051716,GO:0071704,GO:0090304,GO:0140097,GO:1901360	6.5.1.2	ko:K01972	ko03030,ko03410,ko03420,ko03430,map03030,map03410,map03420,map03430	-	R00382	RC00005	ko00000,ko00001,ko01000,ko03032,ko03400	-	-	-	BRCT,DNA_ligase_OB,DNA_ligase_ZBD,DNA_ligase_aden,HHH_2,HHH_5
BYD3_k127_7651693_16	1121957.ATVL01000006_gene2830	1.854e-57	220.0	COG4206@1|root,COG4206@2|Bacteria,4NED9@976|Bacteroidetes,47M0G@768503|Cytophagia	976|Bacteroidetes	H	TonB-dependent Receptor Plug	btuB	-	-	ko:K02014	-	-	-	-	ko00000,ko02000	1.B.14	-	-	Plug,TonB_dep_Rec
BYD3_k127_7696342_0	945713.IALB_2672	7.184e-204	642.0	COG0372@1|root,COG0372@2|Bacteria	2|Bacteria	C	Belongs to the citrate synthase family	gltA	-	2.3.3.1	ko:K01647	ko00020,ko00630,ko01100,ko01110,ko01120,ko01130,ko01200,ko01210,ko01230,map00020,map00630,map01100,map01110,map01120,map01130,map01200,map01210,map01230	M00009,M00010,M00012,M00740	R00351	RC00004,RC00067	br01601,ko00000,ko00001,ko00002,ko01000	-	-	-	Citrate_synt
BYD3_k127_7696342_1	1168289.AJKI01000011_gene443	8.517e-134	466.0	COG2208@1|root,COG3292@1|root,COG2208@2|Bacteria,COG3292@2|Bacteria,4NK8Q@976|Bacteroidetes,2FXT6@200643|Bacteroidia,3XJ4P@558415|Marinilabiliaceae	976|Bacteroidetes	KT	Sigma factor PP2C-like phosphatases	-	-	-	-	-	-	-	-	-	-	-	-	GAF_2,HATPase_c,HisKA_2,Reg_prop,SpoIIE,Y_Y_Y
BYD3_k127_7696342_2	1168289.AJKI01000011_gene442	1.446e-84	299.0	COG0642@1|root,COG0642@2|Bacteria,4P0S2@976|Bacteroidetes,2G21K@200643|Bacteroidia,3XJW5@558415|Marinilabiliaceae	976|Bacteroidetes	T	His Kinase A (phosphoacceptor) domain	-	-	-	-	-	-	-	-	-	-	-	-	HisKA,Response_reg
BYD3_k127_7696581_4	1121373.KB903665_gene3029	2.435e-66	244.0	COG3291@1|root,COG3291@2|Bacteria,4NH4F@976|Bacteroidetes,47N36@768503|Cytophagia	976|Bacteroidetes	S	IgGFc binding protein	-	-	-	-	-	-	-	-	-	-	-	-	CHU_C,IgGFc_binding
BYD3_k127_7696581_8	313606.M23134_04787	3.958e-05	58.0	COG1572@1|root,COG2356@1|root,COG1572@2|Bacteria,COG2356@2|Bacteria,4NHWZ@976|Bacteroidetes	976|Bacteroidetes	L	cellulase activity	-	-	-	-	-	-	-	-	-	-	-	-	CARDB,MAM,fn3
BYD3_k127_7696581_7	319236.JCM19294_702	2.285e-05	59.0	COG3291@1|root,COG3291@2|Bacteria,4NDZQ@976|Bacteroidetes,1HX5A@117743|Flavobacteriia,3HKWA@363408|Nonlabens	976|Bacteroidetes	S	C-terminal domain of CHU protein family	-	-	-	-	-	-	-	-	-	-	-	-	CHU_C,HYR,PKD,SprB
BYD3_k127_7696581_6	755732.Fluta_3340	2.377e-08	69.0	COG1470@1|root,COG3386@1|root,COG1470@2|Bacteria,COG3386@2|Bacteria,4PM1B@976|Bacteroidetes,1IKE7@117743|Flavobacteriia,2PC6R@246874|Cryomorphaceae	2|Bacteria	G	SPTR Cell surface protein	-	-	3.2.1.18	ko:K01186,ko:K14274	ko00040,ko00511,ko00600,ko04142,map00040,map00511,map00600,map04142	-	R02427,R04018	RC00028,RC00077,RC00713	ko00000,ko00001,ko01000,ko02042	-	GH33	-	BNR_2,He_PIG,NPCBM_assoc,PEGA,SGL
BYD3_k127_7696581_2	1168034.FH5T_14650	4.022e-104	346.0	COG0506@1|root,COG0506@2|Bacteria,4NKZB@976|Bacteroidetes,2FW9Q@200643|Bacteroidia	976|Bacteroidetes	E	Proline dehydrogenase	-	-	-	ko:K00318	ko00330,ko01100,ko01110,ko01130,map00330,map01100,map01110,map01130	-	R10507	RC00083	ko00000,ko00001,ko01000	-	-	-	Pro_dh
BYD3_k127_7696581_1	926562.Oweho_1341	1.951e-131	435.0	COG2304@1|root,COG2304@2|Bacteria,4NJF1@976|Bacteroidetes,1I5HE@117743|Flavobacteriia,2PAI7@246874|Cryomorphaceae	976|Bacteroidetes	S	PFAM von Willebrand factor type A domain	-	-	-	ko:K07114	-	-	-	-	ko00000,ko02000	1.A.13.2.2,1.A.13.2.3	-	-	VWA,VWA_2
BYD3_k127_7696581_0	247490.KSU1_C1646	4.672e-300	945.0	COG0474@1|root,COG0474@2|Bacteria,2IXV7@203682|Planctomycetes	203682|Planctomycetes	P	TIGRFAM ATPase, P-type (transporting), HAD superfamily, subfamily IC	-	-	3.6.3.2	ko:K01531	-	-	-	-	ko00000,ko01000	3.A.3.4	-	-	Cation_ATPase,Cation_ATPase_C,Cation_ATPase_N,E1-E2_ATPase,Hydrolase,SBP_bac_1
BYD3_k127_7696581_5	1408473.JHXO01000012_gene298	1.053e-19	93.0	2DX1N@1|root,32V2J@2|Bacteria,4NT61@976|Bacteroidetes,2FTUX@200643|Bacteroidia	976|Bacteroidetes	S	Protein of unknown function (DUF3788)	-	-	-	-	-	-	-	-	-	-	-	-	DUF3788
BYD3_k127_7696581_3	1123008.KB905693_gene1220	4.712e-91	307.0	COG1680@1|root,COG1680@2|Bacteria,4NI1Z@976|Bacteroidetes,2FUDK@200643|Bacteroidia,22YN2@171551|Porphyromonadaceae	976|Bacteroidetes	V	Beta-lactamase	-	-	3.4.16.4	ko:K01286	-	-	-	-	ko00000,ko01000	-	-	-	Beta-lactamase
BYD3_k127_7709486_6	1515615.HQ41_00385	2.534e-52	186.0	COG0008@1|root,COG0008@2|Bacteria,4NFCC@976|Bacteroidetes,2FMVI@200643|Bacteroidia,22W5Z@171551|Porphyromonadaceae	976|Bacteroidetes	J	Catalyzes a two-step reaction, first charging a glutamine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA	glnS	-	6.1.1.18	ko:K01886	ko00970,ko01100,map00970,map01100	M00359,M00360	R03652	RC00055,RC00523	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	-	-	-	tRNA-synt_1c,tRNA-synt_1c_C
BYD3_k127_7709486_10	1408473.JHXO01000001_gene2352	1.574e-29	121.0	COG1539@1|root,COG1539@2|Bacteria,4NQ53@976|Bacteroidetes,2FU2A@200643|Bacteroidia	976|Bacteroidetes	H	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin	folB	-	1.13.11.81,4.1.2.25,5.1.99.8	ko:K01633	ko00790,ko01100,map00790,map01100	M00126,M00840	R03504,R11037,R11073	RC00721,RC00943,RC01479,RC03333,RC03334	ko00000,ko00001,ko00002,ko01000	-	-	-	FolB
BYD3_k127_7709486_4	1168034.FH5T_11665	6.628e-86	298.0	COG5505@1|root,COG5505@2|Bacteria,4NPE1@976|Bacteroidetes	976|Bacteroidetes	S	Protein of unknown function (DUF819)	-	-	-	-	-	-	-	-	-	-	-	-	DUF819
BYD3_k127_7709486_11	1069080.KB913028_gene1521	6.766e-14	78.0	COG0716@1|root,COG0716@2|Bacteria,1V3YW@1239|Firmicutes,4H4F8@909932|Negativicutes	909932|Negativicutes	C	Flavodoxin domain	-	-	-	-	-	-	-	-	-	-	-	-	Flavodoxin_3
BYD3_k127_7709486_9	357276.EL88_02335	8.03e-34	140.0	COG2197@1|root,COG2197@2|Bacteria,4NR5M@976|Bacteroidetes,2FR6P@200643|Bacteroidia,4AQ5R@815|Bacteroidaceae	976|Bacteroidetes	K	helix_turn_helix, Lux Regulon	-	-	-	-	-	-	-	-	-	-	-	-	GerE,PAS_3
BYD3_k127_7709486_14	385682.AFSL01000053_gene477	0.0007843	43.0	COG2076@1|root,COG2076@2|Bacteria,4NQ4U@976|Bacteroidetes,2FTW0@200643|Bacteroidia,3XKWJ@558415|Marinilabiliaceae	976|Bacteroidetes	P	Small Multidrug Resistance protein	sugE	-	-	ko:K11741	-	-	-	-	ko00000,ko02000	2.A.7.1	-	-	Multi_Drug_Res
BYD3_k127_7709486_5	1121324.CLIT_10c03670	4.539e-67	248.0	COG0367@1|root,COG0367@2|Bacteria,1V7VC@1239|Firmicutes,24RGT@186801|Clostridia	186801|Clostridia	E	asparagine synthase	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_7709486_1	435591.BDI_1872	1.469e-260	811.0	COG0673@1|root,COG0673@2|Bacteria,4NEN5@976|Bacteroidetes,2FQ0Q@200643|Bacteroidia,22Z5Q@171551|Porphyromonadaceae	976|Bacteroidetes	S	Oxidoreductase family, NAD-binding Rossmann fold	-	-	-	-	-	-	-	-	-	-	-	-	GFO_IDH_MocA,GFO_IDH_MocA_C,TAT_signal
BYD3_k127_7709486_3	1168034.FH5T_15625	3.515e-148	477.0	COG0673@1|root,COG0673@2|Bacteria,4NFGY@976|Bacteroidetes,2FPN8@200643|Bacteroidia	976|Bacteroidetes	S	Oxidoreductase family, NAD-binding Rossmann fold	-	-	-	-	-	-	-	-	-	-	-	-	GFO_IDH_MocA,GFO_IDH_MocA_C
BYD3_k127_7709486_13	1236497.BAJQ01000113_gene972	8.697e-06	50.0	COG1943@1|root,COG1943@2|Bacteria,4NTCS@976|Bacteroidetes	976|Bacteroidetes	L	Transposase IS200 like	-	-	-	-	-	-	-	-	-	-	-	-	Y1_Tnp
BYD3_k127_7709486_2	1123248.KB893325_gene1153	4.875e-157	520.0	COG3525@1|root,COG3525@2|Bacteria,4NH2R@976|Bacteroidetes,1J070@117747|Sphingobacteriia	976|Bacteroidetes	G	Glycosyl hydrolase family 20, domain 2	-	-	-	-	-	-	-	-	-	-	-	-	Glyco_hydro_20,Glyco_hydro_20b
BYD3_k127_7709486_8	1122179.KB890432_gene4158	9.032e-40	159.0	2CJWB@1|root,32P4S@2|Bacteria,4NQ5Z@976|Bacteroidetes	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	Abi
BYD3_k127_7709486_0	435591.BDI_3296	3.128e-285	893.0	COG3250@1|root,COG3250@2|Bacteria,4NHRH@976|Bacteroidetes	976|Bacteroidetes	G	Belongs to the glycosyl hydrolase 2 family	lacZ_17	-	3.2.1.23	ko:K01190	ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100	-	R01105,R01678,R03355,R04783,R06114	RC00049,RC00452	ko00000,ko00001,ko01000	-	-	-	DUF4982,F5_F8_type_C,Glyco_hydro_2,Glyco_hydro_2_C,Glyco_hydro_2_N
BYD3_k127_7709486_7	555779.Dthio_PD2018	8.802e-42	160.0	COG0642@1|root,COG2202@1|root,COG3829@1|root,COG2202@2|Bacteria,COG2205@2|Bacteria,COG3829@2|Bacteria,1NRP8@1224|Proteobacteria,42PHH@68525|delta/epsilon subdivisions,2WV9C@28221|Deltaproteobacteria,2M8TF@213115|Desulfovibrionales	28221|Deltaproteobacteria	T	PFAM ATP-binding region ATPase domain protein	-	-	-	-	-	-	-	-	-	-	-	-	CBS,HAMP,HATPase_c,HisKA,PAS,PAS_4,PAS_9,Response_reg,dCache_1
BYD3_k127_7711830_5	1121459.AQXE01000009_gene540	1.523e-53	204.0	COG0840@1|root,COG0840@2|Bacteria,1MU9B@1224|Proteobacteria,42KZR@68525|delta/epsilon subdivisions,2WJ2T@28221|Deltaproteobacteria,2M7RA@213115|Desulfovibrionales	28221|Deltaproteobacteria	NT	PFAM chemotaxis	-	-	-	ko:K03406	ko02020,ko02030,map02020,map02030	-	-	-	ko00000,ko00001,ko02035	-	-	-	HAMP,HBM,MCPsignal
BYD3_k127_7711830_8	886379.AEWI01000122_gene1876	4.28e-22	104.0	COG0664@1|root,COG0664@2|Bacteria,4P3ES@976|Bacteroidetes,2FYTV@200643|Bacteroidia,3XKZ8@558415|Marinilabiliaceae	976|Bacteroidetes	T	Cyclic nucleotide-monophosphate binding domain	-	-	-	ko:K21562	-	-	-	-	ko00000,ko03000	-	-	-	HTH_Crp_2,cNMP_binding
BYD3_k127_7711830_4	1237149.C900_05514	9.741e-142	458.0	COG0626@1|root,COG0626@2|Bacteria,4PKE6@976|Bacteroidetes,47KC8@768503|Cytophagia	976|Bacteroidetes	E	Catalyzes the formation of L-homocysteine from O- succinyl-L-homoserine (OSHS) and hydrogen sulfide	-	-	2.5.1.48,4.4.1.8	ko:K01739,ko:K01760	ko00270,ko00450,ko00920,ko01100,ko01110,ko01130,ko01230,map00270,map00450,map00920,map01100,map01110,map01130,map01230	M00017	R00782,R00999,R01286,R01288,R02408,R02508,R03217,R03260,R04941,R04944,R04945,R04946	RC00020,RC00056,RC00069,RC00382,RC00420,RC00488,RC00710,RC01245,RC02303,RC02848,RC02866	ko00000,ko00001,ko00002,ko01000	-	-	-	Cys_Met_Meta_PP
BYD3_k127_7711830_9	1391646.AVSU01000124_gene2207	2.688e-10	71.0	COG4886@1|root,COG4886@2|Bacteria,1V3UH@1239|Firmicutes,24K2H@186801|Clostridia,25TYN@186804|Peptostreptococcaceae	186801|Clostridia	E	Leucine Rich repeats (2 copies)	-	-	-	-	-	-	-	-	-	-	-	-	DUF3888,FIVAR,LRR_4
BYD3_k127_7711830_7	304371.MCP_0795	1.442e-45	171.0	COG4430@1|root,arCOG10241@2157|Archaea,2XUJA@28890|Euryarchaeota	28890|Euryarchaeota	S	Bacteriocin-protection, YdeI or OmpD-Associated	-	-	-	-	-	-	-	-	-	-	-	-	OmdA
BYD3_k127_7711830_6	1047013.AQSP01000095_gene2311	5.16e-50	202.0	COG2234@1|root,COG2234@2|Bacteria,2NRCG@2323|unclassified Bacteria	2|Bacteria	E	Peptidase family M28	-	-	-	-	-	-	-	-	-	-	-	-	PA,Peptidase_M28
BYD3_k127_7711830_1	655815.ZPR_3370	9.165e-257	811.0	COG2217@1|root,COG2217@2|Bacteria,4NERS@976|Bacteroidetes,1HWUI@117743|Flavobacteriia	976|Bacteroidetes	P	heavy metal translocating P-type ATPase	-	-	3.6.3.4,3.6.3.54	ko:K01533,ko:K17686	ko01524,ko04016,map01524,map04016	-	R00086	RC00002	ko00000,ko00001,ko01000	3.A.3.5	-	-	E1-E2_ATPase,HMA,Hydrolase
BYD3_k127_7711830_0	203122.Sde_1487	3.503e-307	972.0	COG1472@1|root,COG1472@2|Bacteria,1MVIV@1224|Proteobacteria,1RMA0@1236|Gammaproteobacteria,465XX@72275|Alteromonadaceae	1236|Gammaproteobacteria	G	Fibronectin type III-like domain	-	-	3.2.1.21	ko:K05349	ko00460,ko00500,ko00940,ko01100,ko01110,map00460,map00500,map00940,map01100,map01110	-	R00026,R02558,R02887,R02985,R03527,R04949,R04998,R10035,R10039,R10040	RC00049,RC00059,RC00171,RC00262,RC00397,RC00451,RC00714,RC00746,RC01248	ko00000,ko00001,ko01000	-	GH3	-	Fn3-like,Glyco_hydro_3,Glyco_hydro_3_C,PA14
BYD3_k127_7711830_2	927658.AJUM01000043_gene698	1.255e-206	658.0	COG0038@1|root,COG0517@1|root,COG0038@2|Bacteria,COG0517@2|Bacteria,4NFCF@976|Bacteroidetes,2FNDY@200643|Bacteroidia,3XIVN@558415|Marinilabiliaceae	976|Bacteroidetes	P	Voltage gated chloride channel	clcB	-	-	ko:K03281	-	-	-	-	ko00000	2.A.49	-	-	CBS,Voltage_CLC
BYD3_k127_7711830_3	203275.BFO_1924	1.06e-166	527.0	COG0112@1|root,COG0112@2|Bacteria,4NE30@976|Bacteroidetes,2FM07@200643|Bacteroidia,22WFH@171551|Porphyromonadaceae	976|Bacteroidetes	E	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism	glyA	-	2.1.2.1	ko:K00600	ko00260,ko00460,ko00630,ko00670,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko01523,map00260,map00460,map00630,map00670,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map01523	M00140,M00141,M00346,M00532	R00945,R09099	RC00022,RC00112,RC01583,RC02958	ko00000,ko00001,ko00002,ko01000	-	-	-	SHMT
BYD3_k127_773820_2	926550.CLDAP_08980	3.062e-108	356.0	COG0182@1|root,COG0182@2|Bacteria,2G5Z3@200795|Chloroflexi	200795|Chloroflexi	J	Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P)	mtnA	-	5.3.1.23	ko:K08963	ko00270,ko01100,map00270,map01100	M00034	R04420	RC01151	ko00000,ko00001,ko00002,ko01000	-	-	-	IF-2B
BYD3_k127_773820_6	1408473.JHXO01000001_gene2208	4.615e-64	228.0	COG0005@1|root,COG0005@2|Bacteria,4P6SU@976|Bacteroidetes	976|Bacteroidetes	F	Phosphorylase superfamily	-	-	2.4.2.28	ko:K00772	ko00270,ko01100,map00270,map01100	M00034	R01402	RC00063,RC02819	ko00000,ko00001,ko00002,ko01000	-	-	-	PNP_UDP_1
BYD3_k127_773820_0	1408473.JHXO01000008_gene2739	1.189e-285	889.0	COG0823@1|root,COG1506@1|root,COG0823@2|Bacteria,COG1506@2|Bacteria,4NFBK@976|Bacteroidetes,2FM6S@200643|Bacteroidia	976|Bacteroidetes	E	Dienelactone hydrolase family	-	-	-	-	-	-	-	-	-	-	-	-	PD40,Peptidase_S9,Peptidase_S9_N
BYD3_k127_773820_5	1499967.BAYZ01000057_gene4710	9.006e-92	308.0	COG0501@1|root,COG0501@2|Bacteria,2NS4G@2323|unclassified Bacteria	2|Bacteria	O	Peptidase family M48	-	-	-	-	-	-	-	-	-	-	-	-	Peptidase_M48
BYD3_k127_773820_1	1250232.JQNJ01000001_gene3426	4.019e-228	722.0	arCOG07336@1|root,2Z8ST@2|Bacteria,4NIV5@976|Bacteroidetes	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_773820_3	1123008.KB905699_gene1914	6.017e-107	354.0	COG3386@1|root,COG3386@2|Bacteria,4NF4A@976|Bacteroidetes,2FSDK@200643|Bacteroidia,231RJ@171551|Porphyromonadaceae	976|Bacteroidetes	G	Arylesterase	-	-	3.1.1.17	ko:K01053	ko00030,ko00053,ko00930,ko01100,ko01110,ko01120,ko01130,ko01200,ko01220,map00030,map00053,map00930,map01100,map01110,map01120,map01130,map01200,map01220	M00129	R01519,R02933,R03751	RC00537,RC00983	ko00000,ko00001,ko00002,ko01000,ko04147	-	-	-	Pectate_lyase_3,SGL
BYD3_k127_773820_4	1121129.KB903373_gene509	6.495e-94	319.0	COG1663@1|root,COG1663@2|Bacteria,4NE2I@976|Bacteroidetes,2FN2X@200643|Bacteroidia,22WXK@171551|Porphyromonadaceae	976|Bacteroidetes	F	Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1- P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA)	lpxK	-	2.7.1.130	ko:K00912	ko00540,ko01100,map00540,map01100	M00060	R04657	RC00002,RC00078	ko00000,ko00001,ko00002,ko01000,ko01005	-	-	-	LpxK
BYD3_k127_773820_7	927658.AJUM01000034_gene462	1.118e-38	149.0	COG0616@1|root,COG0616@2|Bacteria,4NES1@976|Bacteroidetes,2FMR0@200643|Bacteroidia,3XJ1S@558415|Marinilabiliaceae	976|Bacteroidetes	OU	Peptidase family S49	sppA	-	-	ko:K04773	-	-	-	-	ko00000,ko01000,ko01002	-	-	-	Peptidase_S49
BYD3_k127_7743939_0	1408473.JHXO01000004_gene59	7.773e-211	669.0	COG1193@1|root,COG1193@2|Bacteria,4NFE6@976|Bacteroidetes,2FMKP@200643|Bacteroidia	976|Bacteroidetes	L	Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity	mutS2	-	-	ko:K07456	ko03430,map03430	-	-	-	ko00000,ko00001,ko03400	-	-	-	MutS_V,Smr
BYD3_k127_7743939_4	927658.AJUM01000047_gene2884	5.049e-66	238.0	COG1018@1|root,COG1018@2|Bacteria,4PCD8@976|Bacteroidetes,2FXQD@200643|Bacteroidia,3XJNJ@558415|Marinilabiliaceae	976|Bacteroidetes	C	Oxidoreductase FAD-binding domain	-	-	-	-	-	-	-	-	-	-	-	-	FAD_binding_6,NAD_binding_1
BYD3_k127_7743939_1	1168034.FH5T_14410	2.537e-190	604.0	COG0621@1|root,COG0621@2|Bacteria,4NZXZ@976|Bacteroidetes,2FX31@200643|Bacteroidia	976|Bacteroidetes	J	TRAM domain	-	-	2.8.4.3	ko:K06168	-	-	R10645,R10646,R10647	RC00003,RC00980,RC03221,RC03222	ko00000,ko01000,ko03016	-	-	-	Radical_SAM,TRAM,UPF0004
BYD3_k127_7743939_2	385682.AFSL01000026_gene681	1.126e-152	493.0	COG0621@1|root,COG0621@2|Bacteria,4NE0R@976|Bacteroidetes,2FM1T@200643|Bacteroidia,3XJD0@558415|Marinilabiliaceae	976|Bacteroidetes	J	Uncharacterized protein family UPF0004	-	-	-	-	-	-	-	-	-	-	-	-	Radical_SAM,UPF0004
BYD3_k127_7743939_3	694427.Palpr_0316	6.284e-137	442.0	COG2091@1|root,COG2091@2|Bacteria,4NFQ6@976|Bacteroidetes,2FS4M@200643|Bacteroidia,2309R@171551|Porphyromonadaceae	976|Bacteroidetes	H	lysine biosynthetic process via aminoadipic acid	-	-	-	-	-	-	-	-	-	-	-	-	CBM9_1
BYD3_k127_7847096_3	1408473.JHXO01000004_gene169	1.117e-45	166.0	COG0112@1|root,COG0112@2|Bacteria,4NE30@976|Bacteroidetes,2FM07@200643|Bacteroidia	976|Bacteroidetes	E	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism	glyA	-	2.1.2.1	ko:K00600	ko00260,ko00460,ko00630,ko00670,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko01523,map00260,map00460,map00630,map00670,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map01523	M00140,M00141,M00346,M00532	R00945,R09099	RC00022,RC00112,RC01583,RC02958	ko00000,ko00001,ko00002,ko01000	-	-	-	SHMT
BYD3_k127_7847096_2	1408473.JHXO01000004_gene168	5.051e-67	237.0	COG0730@1|root,COG0730@2|Bacteria,4NKPI@976|Bacteroidetes,2FSAZ@200643|Bacteroidia	976|Bacteroidetes	S	Sulfite exporter TauE/SafE	-	-	-	ko:K07090	-	-	-	-	ko00000	-	-	-	TauE
BYD3_k127_7847096_5	886379.AEWI01000010_gene610	1.85e-37	151.0	COG0810@1|root,COG0810@2|Bacteria,4NG4I@976|Bacteroidetes,2FM9A@200643|Bacteroidia,3XJ6S@558415|Marinilabiliaceae	976|Bacteroidetes	M	TonB family domain protein	-	-	-	-	-	-	-	-	-	-	-	-	TonB_C
BYD3_k127_7847096_4	1168034.FH5T_19545	9.163e-39	148.0	COG0848@1|root,COG0848@2|Bacteria,4NNI6@976|Bacteroidetes,2FRY4@200643|Bacteroidia	976|Bacteroidetes	U	Transport energizing protein, ExbD TolR family	-	-	-	ko:K03559	-	-	-	-	ko00000,ko02000	1.A.30.2.1	-	-	ExbD
BYD3_k127_7847096_1	385682.AFSL01000064_gene1720	2.94e-84	285.0	COG0811@1|root,COG0811@2|Bacteria,4NFIX@976|Bacteroidetes,2FNG0@200643|Bacteroidia,3XIUJ@558415|Marinilabiliaceae	976|Bacteroidetes	U	MotA/TolQ/ExbB proton channel family	exbB	-	-	ko:K03561	-	-	-	-	ko00000,ko02000	1.A.30.2.1	-	-	MotA_ExbB
BYD3_k127_7847096_0	1408473.JHXO01000004_gene166	9.089e-141	477.0	COG2911@1|root,COG2911@2|Bacteria,4NF7F@976|Bacteroidetes,2FNBJ@200643|Bacteroidia	976|Bacteroidetes	S	Psort location OuterMembrane, score 9.49	-	-	-	-	-	-	-	-	-	-	-	-	TamB
BYD3_k127_7870430_6	1121104.AQXH01000001_gene1733	1.953e-42	165.0	COG1596@1|root,COG1596@2|Bacteria,4NEXJ@976|Bacteroidetes,1IPNG@117747|Sphingobacteriia	976|Bacteroidetes	M	export protein	kpsD	-	-	-	-	-	-	-	-	-	-	-	Caps_synth_GfcC,Poly_export,SLBB
BYD3_k127_7870430_4	382464.ABSI01000010_gene3558	1.469e-61	229.0	COG1668@1|root,COG1668@2|Bacteria	2|Bacteria	CP	transmembrane transport	natB	-	-	ko:K01992	-	M00254	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	ABC2_membrane_3
BYD3_k127_7870430_3	240015.ACP_1742	3.118e-74	259.0	COG4152@1|root,COG4152@2|Bacteria,3Y2NV@57723|Acidobacteria,2JHVX@204432|Acidobacteriia	204432|Acidobacteriia	S	pfam abc	-	-	-	ko:K01990	-	M00254	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	ABC_tran,DUF4162
BYD3_k127_7870430_0	1408473.JHXO01000009_gene3392	1.461e-164	535.0	COG4030@1|root,COG4030@2|Bacteria,4NHV9@976|Bacteroidetes,2FNZY@200643|Bacteroidia	976|Bacteroidetes	S	Protein of unknown function (DUF2961)	-	-	-	-	-	-	-	-	-	-	-	-	DUF2961
BYD3_k127_7870430_1	1168034.FH5T_02400	1.486e-143	466.0	COG0738@1|root,COG0738@2|Bacteria,4NFTC@976|Bacteroidetes	976|Bacteroidetes	G	Pfam Major Facilitator Superfamily	-	-	-	-	-	-	-	-	-	-	-	-	MFS_1
BYD3_k127_7870430_2	555500.I215_12888	1.025e-79	273.0	COG2514@1|root,COG2514@2|Bacteria,4NMJC@976|Bacteroidetes,1I2B2@117743|Flavobacteriia	976|Bacteroidetes	S	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily	catE	-	1.13.11.2	ko:K07104	ko00361,ko00362,ko00622,ko00643,ko01100,ko01120,ko01220,map00361,map00362,map00622,map00643,map01100,map01120,map01220	M00569	R00816,R04089,R05295,R05404,R05406,R07795	RC00387,RC00643,RC01075,RC01364,RC01914	ko00000,ko00001,ko00002,ko01000	-	-	-	Glyoxalase
BYD3_k127_7870430_5	1168034.FH5T_16290	2.423e-50	183.0	2DYYH@1|root,34BRY@2|Bacteria	2|Bacteria	S	Protein of unknown function (DUF3795)	-	-	-	-	-	-	-	-	-	-	-	-	DUF3795
BYD3_k127_7882376_16	1123234.AUKI01000011_gene1272	9.389e-39	166.0	COG1520@1|root,COG2304@1|root,COG1520@2|Bacteria,COG2304@2|Bacteria,4PKD0@976|Bacteroidetes,1HWKJ@117743|Flavobacteriia	976|Bacteroidetes	U	Large extracellular alpha-helical protein	-	-	-	-	-	-	-	-	-	-	-	-	CHU_C,HYR,LRR_adjacent
BYD3_k127_7882376_15	1121373.KB903620_gene2240	2.406e-43	171.0	COG3064@1|root,COG3064@2|Bacteria,4NM6Q@976|Bacteroidetes,47P6I@768503|Cytophagia	976|Bacteroidetes	M	Type IX secretion system membrane protein PorP/SprF	-	-	-	-	-	-	-	-	-	-	-	-	PorP_SprF
BYD3_k127_7882376_4	929556.Solca_1443	7.696e-218	698.0	COG0823@1|root,COG1506@1|root,COG0823@2|Bacteria,COG1506@2|Bacteria,4NETS@976|Bacteroidetes,1IQ4I@117747|Sphingobacteriia	976|Bacteroidetes	EU	peptidase	dpp	-	3.4.14.5	ko:K01278	ko04974,map04974	-	-	-	ko00000,ko00001,ko01000,ko01002,ko04090,ko04147	-	-	-	DPPIV_N,Peptidase_S9
BYD3_k127_7882376_0	1168289.AJKI01000030_gene1157	0.0	1057.0	COG0441@1|root,COG0441@2|Bacteria,4NEFT@976|Bacteroidetes,2FMAU@200643|Bacteroidia,3XJJD@558415|Marinilabiliaceae	976|Bacteroidetes	J	Threonyl and Alanyl tRNA synthetase second additional domain	thrS	GO:0003674,GO:0003824,GO:0004812,GO:0004829,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006435,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576	6.1.1.3	ko:K01868	ko00970,map00970	M00359,M00360	R03663	RC00055,RC00523	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	-	-	-	HGTP_anticodon,TGS,tRNA-synt_2b,tRNA_SAD
BYD3_k127_7882376_8	927658.AJUM01000015_gene3165	2.07e-74	254.0	COG0290@1|root,COG0290@2|Bacteria,4NIZ5@976|Bacteroidetes,2FNF1@200643|Bacteroidia,3XJYZ@558415|Marinilabiliaceae	976|Bacteroidetes	J	Translation initiation factor IF-3, N-terminal domain	infC	GO:0003674,GO:0003676,GO:0003723,GO:0003743,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006412,GO:0006413,GO:0006518,GO:0006807,GO:0006996,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016020,GO:0016043,GO:0019538,GO:0022411,GO:0032790,GO:0032984,GO:0032988,GO:0034641,GO:0034645,GO:0043021,GO:0043022,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1903008	-	ko:K02520	-	-	-	-	ko00000,ko03012,ko03029	-	-	-	IF3_C,IF3_N
BYD3_k127_7882376_18	1168034.FH5T_19620	3.478e-18	86.0	COG0291@1|root,COG0291@2|Bacteria,4NUVR@976|Bacteroidetes,2FUKE@200643|Bacteroidia	976|Bacteroidetes	J	Belongs to the bacterial ribosomal protein bL35 family	rpmI	GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904	-	ko:K02916	ko03010,map03010	M00178	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_L35p
BYD3_k127_7882376_12	742725.HMPREF9450_01426	4.289e-51	183.0	COG0292@1|root,COG0292@2|Bacteria,4NNKU@976|Bacteroidetes,2FSHF@200643|Bacteroidia,22UH8@171550|Rikenellaceae	976|Bacteroidetes	J	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit	rplT	GO:0000027,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006996,GO:0008150,GO:0009987,GO:0015934,GO:0016043,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0042254,GO:0042255,GO:0042273,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043933,GO:0044085,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071826,GO:0071840,GO:1990904	-	ko:K02887	ko03010,map03010	M00178	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_L20
BYD3_k127_7882376_7	1122931.AUAE01000009_gene4884	7.024e-86	290.0	COG0289@1|root,COG0289@2|Bacteria,4NDX2@976|Bacteroidetes,2FNUW@200643|Bacteroidia,22VX2@171551|Porphyromonadaceae	976|Bacteroidetes	E	Belongs to the DapB family	dapB	-	1.17.1.8	ko:K00215	ko00261,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00261,map00300,map01100,map01110,map01120,map01130,map01230	M00016,M00525,M00526,M00527	R04198,R04199	RC00478	ko00000,ko00001,ko00002,ko01000	-	-	-	DapB_C,DapB_N
BYD3_k127_7882376_6	1168289.AJKI01000030_gene1164	7.59e-144	469.0	COG0681@1|root,COG0681@2|Bacteria,4NFTP@976|Bacteroidetes,2FNMS@200643|Bacteroidia,3XJFQ@558415|Marinilabiliaceae	976|Bacteroidetes	U	Peptidase S24-like	lepB	-	3.4.21.89	ko:K03100	ko02024,ko03060,map02024,map03060	-	-	-	ko00000,ko00001,ko01000,ko01002	-	-	-	Peptidase_S24,Peptidase_S26
BYD3_k127_7882376_11	869213.JCM21142_42073	1.714e-53	191.0	COG0359@1|root,COG0359@2|Bacteria,4NNRP@976|Bacteroidetes,47PY1@768503|Cytophagia	976|Bacteroidetes	J	binds to the 23S rRNA	rplI	GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904	-	ko:K02939	ko03010,map03010	M00178	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_L9_C,Ribosomal_L9_N
BYD3_k127_7882376_14	869213.JCM21142_42072	1.845e-44	162.0	COG0238@1|root,COG0238@2|Bacteria,4NSAR@976|Bacteroidetes,47R23@768503|Cytophagia	976|Bacteroidetes	J	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit	rpsR	GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904	-	ko:K02963	ko03010,map03010	M00178	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_S18
BYD3_k127_7882376_13	357276.EL88_15900	9.215e-45	165.0	COG0360@1|root,COG0360@2|Bacteria,4NQ9W@976|Bacteroidetes,2FSHK@200643|Bacteroidia,4AQYI@815|Bacteroidaceae	976|Bacteroidetes	J	Binds together with S18 to 16S ribosomal RNA	rpsF	GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015935,GO:0019843,GO:0022626,GO:0022627,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0070181,GO:0097159,GO:1901363,GO:1990904	-	ko:K02990	ko03010,map03010	M00178	-	-	br01610,ko00000,ko00001,ko00002,ko03011,ko03029	-	-	-	Ribosomal_S6
BYD3_k127_7882376_5	694427.Palpr_0372	2.401e-190	604.0	COG1236@1|root,COG1236@2|Bacteria,4NESD@976|Bacteroidetes,2FWIW@200643|Bacteroidia,22ZVB@171551|Porphyromonadaceae	976|Bacteroidetes	J	Beta-Casp domain	-	-	-	ko:K07576	-	-	-	-	ko00000	-	-	-	Beta-Casp,Lactamase_B,Lactamase_B_6,RMMBL
BYD3_k127_7882376_10	385682.AFSL01000006_gene2363	4.882e-59	213.0	COG1051@1|root,COG1051@2|Bacteria,4NIBP@976|Bacteroidetes,2FNT4@200643|Bacteroidia,3XJ7M@558415|Marinilabiliaceae	976|Bacteroidetes	F	Hydrolase, NUDIX family	-	-	3.6.1.55	ko:K03574	-	-	-	-	ko00000,ko01000,ko03400	-	-	-	NUDIX
BYD3_k127_7882376_3	471870.BACINT_02171	3.967e-220	692.0	COG1070@1|root,COG1070@2|Bacteria,4NFBZ@976|Bacteroidetes,2FPIS@200643|Bacteroidia,4AMYR@815|Bacteroidaceae	976|Bacteroidetes	G	Carbohydrate kinase, FGGY family protein	xylB_2	-	2.7.1.17	ko:K00854	ko00040,ko01100,map00040,map01100	M00014	R01639	RC00002,RC00538	ko00000,ko00001,ko00002,ko01000	-	-	-	FGGY_C,FGGY_N
BYD3_k127_7882376_2	1239962.C943_02056	1.317e-224	702.0	COG2115@1|root,COG2115@2|Bacteria,4NEBQ@976|Bacteroidetes,47K9A@768503|Cytophagia	976|Bacteroidetes	G	Belongs to the xylose isomerase family	xylA	-	5.3.1.5	ko:K01805	ko00040,ko00051,ko01100,map00040,map00051,map01100	-	R00878,R01432	RC00376,RC00516	ko00000,ko00001,ko01000	-	-	-	-
BYD3_k127_7882376_1	1168034.FH5T_14620	3.539e-243	757.0	COG0477@1|root,COG0477@2|Bacteria,4PKTJ@976|Bacteroidetes,2FNZ0@200643|Bacteroidia	976|Bacteroidetes	P	Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family	-	-	-	ko:K08138	-	-	-	-	ko00000,ko02000	2.A.1.1.3	-	-	Sugar_tr
BYD3_k127_7882376_9	468059.AUHA01000005_gene2572	7.684e-73	252.0	COG0325@1|root,COG0325@2|Bacteria,4NE42@976|Bacteroidetes,1INT9@117747|Sphingobacteriia	976|Bacteroidetes	S	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis	yggS	-	-	ko:K06997	-	-	-	-	ko00000	-	-	-	Ala_racemase_N
BYD3_k127_7882376_17	1168289.AJKI01000025_gene1467	2.153e-29	119.0	COG0167@1|root,COG0167@2|Bacteria,4NF4D@976|Bacteroidetes,2FM0X@200643|Bacteroidia,3XISP@558415|Marinilabiliaceae	976|Bacteroidetes	F	Dihydroorotate dehydrogenase	preA	-	1.3.98.1	ko:K00226	ko00240,ko01100,map00240,map01100	M00051	R01867	RC00051	ko00000,ko00001,ko00002,ko01000	-	-	-	DHO_dh
BYD3_k127_7924963_17	869213.JCM21142_31224	4.758e-18	83.0	COG0843@1|root,COG0843@2|Bacteria,4NEH8@976|Bacteroidetes,47JBQ@768503|Cytophagia	976|Bacteroidetes	C	Belongs to the heme-copper respiratory oxidase family	coxN	-	1.9.3.1	ko:K02274	ko00190,ko01100,map00190,map01100	M00155	R00081	RC00016	ko00000,ko00001,ko00002,ko01000	3.D.4.2,3.D.4.3,3.D.4.4,3.D.4.6	-	-	COX1
BYD3_k127_7924963_11	1168034.FH5T_09805	1.905e-104	347.0	COG1622@1|root,COG1622@2|Bacteria,4NFNF@976|Bacteroidetes,2FX9N@200643|Bacteroidia	976|Bacteroidetes	C	Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B)	ctaC	-	1.9.3.1	ko:K02275	ko00190,ko01100,map00190,map01100	M00155	R00081	RC00016	ko00000,ko00001,ko00002,ko01000	3.D.4.2,3.D.4.4,3.D.4.6	-	-	COX2,COX2_TM
BYD3_k127_7924963_13	694427.Palpr_2936	1.306e-57	210.0	COG0109@1|root,COG0109@2|Bacteria,4NF5A@976|Bacteroidetes	976|Bacteroidetes	O	Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group	ctaB	-	2.5.1.141	ko:K02257	ko00190,ko00860,ko01100,ko01110,ko04714,map00190,map00860,map01100,map01110,map04714	M00154	R07411	RC01786	ko00000,ko00001,ko00002,ko01000,ko01006,ko03029	-	-	-	UbiA
BYD3_k127_7924963_2	387092.NIS_1187	2.769e-255	822.0	COG0755@1|root,COG1333@1|root,COG0755@2|Bacteria,COG1333@2|Bacteria,1RG0A@1224|Proteobacteria,42N37@68525|delta/epsilon subdivisions,2YMXW@29547|Epsilonproteobacteria	29547|Epsilonproteobacteria	O	Cytochrome c biogenesis protein	ccsBA	-	-	-	-	-	-	-	-	-	-	-	Cytochrom_C_asm,ResB
BYD3_k127_7924963_18	1168289.AJKI01000044_gene11	4.233e-16	82.0	2ABAC@1|root,310QX@2|Bacteria,4PFCH@976|Bacteroidetes,2G1ED@200643|Bacteroidia,3XKZ4@558415|Marinilabiliaceae	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_7924963_15	714943.Mucpa_4065	3.302e-20	98.0	COG3637@1|root,COG3637@2|Bacteria,4NNFR@976|Bacteroidetes,1IU44@117747|Sphingobacteriia	976|Bacteroidetes	M	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_7924963_7	391596.PBAL39_12037	1.051e-141	457.0	COG1902@1|root,COG1902@2|Bacteria,4NF98@976|Bacteroidetes,1IQZ0@117747|Sphingobacteriia	976|Bacteroidetes	C	NADH flavin oxidoreductase NADH oxidase	-	-	1.3.1.34	ko:K00219	-	-	-	-	ko00000,ko01000	-	-	-	Oxidored_FMN,Pyr_redox_2
BYD3_k127_7924963_22	694427.Palpr_2672	1.14e-11	70.0	2EBJZ@1|root,335KD@2|Bacteria,4NWP2@976|Bacteroidetes	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_7924963_20	1086011.HJ01_03475	7.332e-16	81.0	2EC34@1|root,33623@2|Bacteria,4NVW7@976|Bacteroidetes,1I737@117743|Flavobacteriia,2NWAU@237|Flavobacterium	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	Phage_holin_3_6
BYD3_k127_7924963_16	1121897.AUGO01000014_gene3425	6.021e-19	89.0	COG4980@1|root,COG4980@2|Bacteria,4NW56@976|Bacteroidetes,1IJ5I@117743|Flavobacteriia,2P0J3@237|Flavobacterium	976|Bacteroidetes	S	YtxH-like protein	-	-	-	-	-	-	-	-	-	-	-	-	YtxH
BYD3_k127_7924963_1	927658.AJUM01000047_gene2727	1.234e-302	933.0	COG0318@1|root,COG0318@2|Bacteria,4NFPF@976|Bacteroidetes,2FMTR@200643|Bacteroidia,3XIM3@558415|Marinilabiliaceae	976|Bacteroidetes	IQ	AMP-binding enzyme C-terminal domain	-	-	-	ko:K00666	-	-	-	-	ko00000,ko01000,ko01004	-	-	-	AMP-binding,AMP-binding_C
BYD3_k127_7924963_14	1168034.FH5T_06775	5.103e-54	195.0	COG1917@1|root,COG1917@2|Bacteria,4NMER@976|Bacteroidetes,2G0DI@200643|Bacteroidia	976|Bacteroidetes	K	Cupin domain	-	-	-	-	-	-	-	-	-	-	-	-	Cupin_2,HTH_19,HTH_3
BYD3_k127_7924963_9	1279009.ADICEAN_03786	2.146e-137	483.0	COG1640@1|root,COG3280@1|root,COG1640@2|Bacteria,COG3280@2|Bacteria,4NF7Z@976|Bacteroidetes,47NI0@768503|Cytophagia	976|Bacteroidetes	G	4-alpha-glucanotransferase	malQ	-	2.4.1.25	ko:K00705	ko00500,ko01100,map00500,map01100	-	R05196	RC00049	ko00000,ko00001,ko01000	-	GH77	-	Alpha-amylase,CBM_20,Glyco_hydro_77
BYD3_k127_7924963_4	1168289.AJKI01000044_gene37	2.47e-200	640.0	COG0296@1|root,COG0296@2|Bacteria,4PKT8@976|Bacteroidetes,2FPN0@200643|Bacteroidia	976|Bacteroidetes	M	Belongs to the glycosyl hydrolase 13 family	treZ	-	3.2.1.141	ko:K01236	ko00500,ko01100,ko01110,map00500,map01100,map01110	M00565	R09995,R11256	RC00049	ko00000,ko00001,ko00002,ko01000	-	CBM48,GH13	-	Alpha-amylase,BACON,CBM_48,DUF3459
BYD3_k127_7924963_0	1168289.AJKI01000044_gene38	0.0	1097.0	COG1523@1|root,COG1523@2|Bacteria,4NIH2@976|Bacteroidetes,2FKZS@200643|Bacteroidia,3XISJ@558415|Marinilabiliaceae	976|Bacteroidetes	G	Carbohydrate-binding module 48 (Isoamylase N-terminal domain)	glgX	-	3.2.1.68	ko:K01214	ko00500,ko01100,ko01110,map00500,map01100,map01110	M00565	R09995,R11261	-	ko00000,ko00001,ko00002,ko01000	-	CBM48,GH13	-	Alpha-amylase,CBM_48
BYD3_k127_7924963_21	1242864.D187_003993	1.013e-14	81.0	2ESNI@1|root,33K73@2|Bacteria	2|Bacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	DUF2378
BYD3_k127_7924963_3	1408473.JHXO01000008_gene2753	1.667e-227	720.0	COG1132@1|root,COG1132@2|Bacteria,4NFQG@976|Bacteroidetes,2G2XP@200643|Bacteroidia	976|Bacteroidetes	V	ABC transporter transmembrane region	-	-	-	ko:K06147	-	-	-	-	ko00000,ko02000	3.A.1.106,3.A.1.109,3.A.1.21	-	-	ABC_membrane,ABC_tran
BYD3_k127_7924963_19	1122605.KB893626_gene2481	4.548e-16	83.0	COG1132@1|root,COG1132@2|Bacteria,4NFF7@976|Bacteroidetes	976|Bacteroidetes	V	ABC transporter, transmembrane region	-	-	-	ko:K06147	-	-	-	-	ko00000,ko02000	3.A.1.106,3.A.1.109,3.A.1.21	-	-	ABC_membrane,ABC_tran
BYD3_k127_7924963_5	504472.Slin_1095	2.589e-195	618.0	COG1132@1|root,COG1132@2|Bacteria,4NFF7@976|Bacteroidetes,47TAT@768503|Cytophagia	976|Bacteroidetes	V	ABC transporter transmembrane region	-	-	-	ko:K06147	-	-	-	-	ko00000,ko02000	3.A.1.106,3.A.1.109,3.A.1.21	-	-	ABC_membrane,ABC_tran
BYD3_k127_7924963_6	1121875.KB907547_gene3130	6.936e-176	561.0	COG2610@1|root,COG2610@2|Bacteria,4NFBD@976|Bacteroidetes,1HY9I@117743|Flavobacteriia	976|Bacteroidetes	EG	H gluconate symporter and related	gntT	-	-	ko:K06155	-	-	-	-	ko00000,ko02000	2.A.8.1.4	-	-	GntP_permease
BYD3_k127_7924963_12	886377.Murru_3435	6.896e-64	222.0	COG0251@1|root,COG0251@2|Bacteria,4NMAM@976|Bacteroidetes,1I1KB@117743|Flavobacteriia	976|Bacteroidetes	J	translation initiation inhibitor, yjgF family	-	-	-	-	-	-	-	-	-	-	-	-	YjgF_endoribonc
BYD3_k127_7924963_10	1296416.JACB01000051_gene2691	1.503e-116	386.0	COG3616@1|root,COG3616@2|Bacteria,4NF5K@976|Bacteroidetes,1HZBK@117743|Flavobacteriia	976|Bacteroidetes	E	amino acid aldolase or racemase	-	-	-	-	-	-	-	-	-	-	-	-	Ala_racemase_N,D-ser_dehydrat
BYD3_k127_7924963_8	1121011.AUCB01000036_gene831	5.32e-138	445.0	COG2355@1|root,COG2355@2|Bacteria,4NDYZ@976|Bacteroidetes,1HZ07@117743|Flavobacteriia,23HZ0@178469|Arenibacter	976|Bacteroidetes	E	Membrane dipeptidase (Peptidase family M19)	-	-	3.4.13.19	ko:K01273	-	-	-	-	ko00000,ko00537,ko01000,ko01002,ko04147	-	-	-	Peptidase_M19
BYD3_k127_7925733_4	497964.CfE428DRAFT_0242	2.75e-36	158.0	COG1858@1|root,COG3391@1|root,COG3534@1|root,COG5276@1|root,COG1858@2|Bacteria,COG3391@2|Bacteria,COG3534@2|Bacteria,COG5276@2|Bacteria,46U43@74201|Verrucomicrobia	74201|Verrucomicrobia	C	SMART LamG domain protein jellyroll fold domain protein	-	-	-	-	-	-	-	-	-	-	-	-	Big_5,LVIVD,Laminin_G_3,PKD
BYD3_k127_7925733_8	471854.Dfer_0264	1.667e-17	97.0	COG4733@1|root,COG4733@2|Bacteria,4NK2V@976|Bacteroidetes,47P6C@768503|Cytophagia	976|Bacteroidetes	G	PFAM Fibronectin type III domain	-	-	-	-	-	-	-	-	-	-	-	-	fn3
BYD3_k127_7925733_6	1123276.KB893246_gene571	3.324e-29	129.0	COG1216@1|root,COG1216@2|Bacteria,4NIKM@976|Bacteroidetes,47M8F@768503|Cytophagia	976|Bacteroidetes	S	Glycosyltransferase like family 2	-	-	-	-	-	-	-	-	-	-	-	-	Glycos_transf_2
BYD3_k127_7925733_5	756499.Desde_3857	6.131e-32	139.0	COG0297@1|root,COG0297@2|Bacteria,1UHWI@1239|Firmicutes,25EKA@186801|Clostridia,267B2@186807|Peptococcaceae	186801|Clostridia	G	Glycosyl transferase 4-like domain	-	-	-	-	-	-	-	-	-	-	-	-	Glyco_transf_4,Glycos_transf_1
BYD3_k127_7925733_1	391625.PPSIR1_39210	4.7e-41	174.0	2DBVG@1|root,2ZBB1@2|Bacteria,1N1MS@1224|Proteobacteria	1224|Proteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_7925733_7	1185876.BN8_01058	2.238e-28	133.0	COG4733@1|root,COG4733@2|Bacteria,4NK2V@976|Bacteroidetes,47P6C@768503|Cytophagia	976|Bacteroidetes	G	PFAM Fibronectin type III domain	-	-	-	-	-	-	-	-	-	-	-	-	fn3
BYD3_k127_7925733_3	497964.CfE428DRAFT_0481	1.213e-36	160.0	COG1858@1|root,COG3391@1|root,COG4733@1|root,COG5276@1|root,COG1858@2|Bacteria,COG3391@2|Bacteria,COG4733@2|Bacteria,COG5276@2|Bacteria,46U43@74201|Verrucomicrobia	74201|Verrucomicrobia	C	SMART LamG domain protein jellyroll fold domain protein	-	-	-	-	-	-	-	-	-	-	-	-	Big_5,LVIVD,Laminin_G_3,PKD
BYD3_k127_7925733_2	391625.PPSIR1_39210	2.182e-40	173.0	2DBVG@1|root,2ZBB1@2|Bacteria,1N1MS@1224|Proteobacteria	1224|Proteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_7925733_9	1150474.JQJI01000006_gene839	2.342e-09	71.0	COG1388@1|root,COG4733@1|root,COG1388@2|Bacteria,COG4733@2|Bacteria,2GE91@200918|Thermotogae	2|Bacteria	M	Fibronectin type III domain	-	-	-	ko:K03933	-	-	-	-	ko00000	-	AA10,CBM73	-	Bac_DNA_binding,CHAP,fn3
BYD3_k127_7925733_11	195105.CN97_16610	2.545e-07	64.0	COG3420@1|root,COG3420@2|Bacteria,1PAMP@1224|Proteobacteria	1224|Proteobacteria	P	Periplasmic copper-binding protein (NosD)	-	-	-	-	-	-	-	-	-	-	-	-	Beta_helix
BYD3_k127_7925733_10	160799.PBOR_12865	7.058e-09	70.0	COG4733@1|root,COG5434@1|root,COG4733@2|Bacteria,COG5434@2|Bacteria,1TRWY@1239|Firmicutes,4HW0V@91061|Bacilli,2773H@186822|Paenibacillaceae	91061|Bacilli	M	Domain of Unknown Function (DUF1080)	-	-	-	-	-	-	-	-	-	-	-	-	Beta_helix,DUF1080
BYD3_k127_7925733_0	398511.BpOF4_03790	4.971e-114	381.0	COG0365@1|root,COG0365@2|Bacteria,1TQTI@1239|Firmicutes,4H9PN@91061|Bacilli,1ZBDX@1386|Bacillus	91061|Bacilli	I	COG0365 Acyl-coenzyme A synthetases AMP-(fatty) acid ligases	acsA	-	6.2.1.1	ko:K01895	ko00010,ko00620,ko00640,ko00680,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00620,map00640,map00680,map00720,map01100,map01110,map01120,map01130,map01200	M00357	R00235,R00236,R00316,R00926,R01354	RC00004,RC00012,RC00043,RC00070,RC02746,RC02816	ko00000,ko00001,ko00002,ko01000,ko01004	-	-	-	AMP-binding,AMP-binding_C
BYD3_k127_7945022_1	1122621.ATZA01000031_gene2957	3.842e-96	326.0	COG4974@1|root,COG4974@2|Bacteria,4NGE1@976|Bacteroidetes,1IRMS@117747|Sphingobacteriia	976|Bacteroidetes	L	Phage integrase, N-terminal SAM-like domain	-	-	-	-	-	-	-	-	-	-	-	-	Phage_int_SAM_4,Phage_integrase
BYD3_k127_7945022_0	1408473.JHXO01000006_gene1273	1.646e-269	850.0	COG0210@1|root,COG0210@2|Bacteria,4NDWN@976|Bacteroidetes,2FNIM@200643|Bacteroidia	976|Bacteroidetes	L	DNA helicase	pcrA	-	3.6.4.12	ko:K03657	ko03420,ko03430,map03420,map03430	-	-	-	ko00000,ko00001,ko01000,ko03400	-	-	-	UvrD-helicase,UvrD_C
BYD3_k127_7945022_2	1168289.AJKI01000011_gene512	1.227e-35	137.0	28H5J@1|root,2Z7I5@2|Bacteria,4NHK6@976|Bacteroidetes,2FM8F@200643|Bacteroidia,3XIMY@558415|Marinilabiliaceae	976|Bacteroidetes	S	Domain of unknown function (DUF4290)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4290
BYD3_k127_7968164_5	927658.AJUM01000043_gene702	2.004e-20	93.0	2EUGE@1|root,33MYP@2|Bacteria,4NZG4@976|Bacteroidetes,2FZZV@200643|Bacteroidia,3XKZ5@558415|Marinilabiliaceae	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_7968164_0	1346330.M472_01725	1.48e-199	640.0	COG1164@1|root,COG1164@2|Bacteria	2|Bacteria	E	metalloendopeptidase activity	pepF	GO:0003674,GO:0003824,GO:0004175,GO:0004222,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006465,GO:0006508,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008237,GO:0009987,GO:0010467,GO:0016485,GO:0016787,GO:0019538,GO:0034641,GO:0043170,GO:0043603,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0051604,GO:0070011,GO:0071704,GO:0140096,GO:1901564	-	ko:K08602	-	-	-	-	ko00000,ko01000,ko01002	-	-	-	Peptidase_M3,Peptidase_M3_N
BYD3_k127_7968164_1	938709.AUSH02000031_gene1316	5.24e-62	219.0	COG3145@1|root,COG3145@2|Bacteria,4NFEG@976|Bacteroidetes	976|Bacteroidetes	L	Alkylated DNA repair protein	-	-	-	-	-	-	-	-	-	-	-	-	2OG-FeII_Oxy_2
BYD3_k127_7968164_3	929703.KE386491_gene4196	7.517e-50	181.0	2BXJ3@1|root,32JAR@2|Bacteria,4NQKG@976|Bacteroidetes,47QDD@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	Lipocalin_5
BYD3_k127_7968164_4	313596.RB2501_06170	3.414e-36	143.0	2E727@1|root,331KU@2|Bacteria,4NVKM@976|Bacteroidetes	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_7968164_2	313596.RB2501_06175	7.013e-62	221.0	COG1256@1|root,COG1256@2|Bacteria,4NP7S@976|Bacteroidetes	976|Bacteroidetes	N	Domain of unknown function (DUF4407)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4407
BYD3_k127_7970289_0	1453505.JASY01000008_gene777	0.0	1323.0	COG4206@1|root,COG4206@2|Bacteria,4NZWU@976|Bacteroidetes,1I86Y@117743|Flavobacteriia,2P0JG@237|Flavobacterium	976|Bacteroidetes	P	TonB-dependent receptor	-	-	-	-	-	-	-	-	-	-	-	-	CarbopepD_reg_2,Plug,STN,TonB_dep_Rec
BYD3_k127_7970289_4	1453505.JASY01000008_gene778	1.533e-160	519.0	COG4198@1|root,COG4198@2|Bacteria,4NFUK@976|Bacteroidetes,1HWZF@117743|Flavobacteriia,2NTE0@237|Flavobacterium	976|Bacteroidetes	S	Starch-binding associating with outer membrane	-	-	-	-	-	-	-	-	-	-	-	-	SusD-like,SusD-like_2
BYD3_k127_7970289_6	1121373.KB903662_gene64	1.088e-58	210.0	COG0529@1|root,COG0529@2|Bacteria,4NGCU@976|Bacteroidetes,47NAS@768503|Cytophagia	976|Bacteroidetes	P	Catalyzes the synthesis of activated sulfate	cysC	GO:0003674,GO:0003824,GO:0004020,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0044237	2.7.1.25	ko:K00860	ko00230,ko00920,ko01100,ko01120,map00230,map00920,map01100,map01120	M00176	R00509,R04928	RC00002,RC00078	ko00000,ko00001,ko00002,ko01000	-	-	-	APS_kinase
BYD3_k127_7970289_3	869213.JCM21142_3859	3.26e-166	526.0	COG0175@1|root,COG0175@2|Bacteria,4NEPD@976|Bacteroidetes,47JCC@768503|Cytophagia	976|Bacteroidetes	EH	TIGRFAM sulfate adenylyltransferase, small subunit	cysD	-	2.7.7.4	ko:K00957	ko00230,ko00261,ko00450,ko00920,ko01100,ko01120,ko01130,map00230,map00261,map00450,map00920,map01100,map01120,map01130	M00176,M00596	R00529,R04929	RC02809,RC02889	ko00000,ko00001,ko00002,ko01000	-	-	-	PAPS_reduct
BYD3_k127_7970289_1	927658.AJUM01000043_gene811	3.441e-198	627.0	COG2895@1|root,COG2895@2|Bacteria,4NETI@976|Bacteroidetes,2FP06@200643|Bacteroidia,3XJ0D@558415|Marinilabiliaceae	976|Bacteroidetes	P	Elongation factor Tu GTP binding domain	-	-	2.7.1.25,2.7.7.4	ko:K00955,ko:K00956	ko00230,ko00261,ko00450,ko00920,ko01100,ko01120,ko01130,map00230,map00261,map00450,map00920,map01100,map01120,map01130	M00176,M00596	R00509,R00529,R04928,R04929	RC00002,RC00078,RC02809,RC02889	ko00000,ko00001,ko00002,ko01000	-	-	-	GTP_EFTU
BYD3_k127_7970289_7	743722.Sph21_3003	5.023e-57	207.0	COG0791@1|root,COG0791@2|Bacteria,4NE2T@976|Bacteroidetes,1IRW3@117747|Sphingobacteriia	976|Bacteroidetes	M	PFAM NlpC P60 family	ykfC	-	-	-	-	-	-	-	-	-	-	-	NLPC_P60,SH3_3
BYD3_k127_7970289_2	385682.AFSL01000046_gene550	6.405e-191	619.0	COG1480@1|root,COG1480@2|Bacteria,4NEHV@976|Bacteroidetes,2FNT9@200643|Bacteroidia,3XJ9D@558415|Marinilabiliaceae	976|Bacteroidetes	S	7TM-HD extracellular	-	-	-	ko:K07037	-	-	-	-	ko00000	-	-	-	7TM-7TMR_HD,7TMR-HDED,HD
BYD3_k127_7970289_5	886379.AEWI01000139_gene2237	5.981e-63	226.0	COG4206@1|root,COG4206@2|Bacteria,4NHH8@976|Bacteroidetes,2FQ8Y@200643|Bacteroidia,3XJQ2@558415|Marinilabiliaceae	976|Bacteroidetes	H	TonB dependent receptor	-	-	-	ko:K02014	-	-	-	-	ko00000,ko02000	1.B.14	-	-	Plug,TonB_dep_Rec
BYD3_k127_7974133_1	1168034.FH5T_10410	3.703e-96	323.0	COG0841@1|root,COG1131@1|root,COG0841@2|Bacteria,COG1131@2|Bacteria,4NF8M@976|Bacteroidetes,2FQY7@200643|Bacteroidia	976|Bacteroidetes	V	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family	-	-	-	-	-	-	-	-	-	-	-	-	ABC_tran,ACR_tran
BYD3_k127_7974133_0	411901.BACCAC_02269	1.333e-170	552.0	COG0841@1|root,COG1131@1|root,COG0841@2|Bacteria,COG1131@2|Bacteria,4NF8M@976|Bacteroidetes,2FQY7@200643|Bacteroidia,4AQCB@815|Bacteroidaceae	976|Bacteroidetes	V	AcrB/AcrD/AcrF family	-	-	-	-	-	-	-	-	-	-	-	-	ABC_tran,ACR_tran
BYD3_k127_7974133_2	643867.Ftrac_1067	2.212e-43	164.0	28MFD@1|root,2ZASV@2|Bacteria,4NH4N@976|Bacteroidetes,47V25@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_801300_3	616991.JPOO01000003_gene2289	4.231e-55	196.0	COG2909@1|root,COG2909@2|Bacteria,4NZ2F@976|Bacteroidetes	976|Bacteroidetes	K	helix_turn_helix, Lux Regulon	-	-	-	-	-	-	-	-	-	-	-	-	GerE
BYD3_k127_801300_0	616991.JPOO01000003_gene2291	4.453e-138	445.0	COG2159@1|root,COG2159@2|Bacteria,4PJ9Q@976|Bacteroidetes,1IEPW@117743|Flavobacteriia,23IFH@178469|Arenibacter	976|Bacteroidetes	S	amidohydrolase	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_801300_4	593750.Metfor_0128	1.637e-25	124.0	COG0642@1|root,arCOG02348@1|root,arCOG06940@1|root,arCOG02348@2157|Archaea,arCOG06193@2157|Archaea,arCOG06940@2157|Archaea	2157|Archaea	T	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase	-	-	-	ko:K03406	ko02020,ko02030,map02020,map02030	-	-	-	ko00000,ko00001,ko02035	-	-	-	BAT,GAF_2,HATPase_c,HTH_10,PAS,PAS_3,PAS_4,PAS_9,Response_reg
BYD3_k127_801300_1	1168034.FH5T_12980	1.915e-105	374.0	COG5002@1|root,COG5002@2|Bacteria	2|Bacteria	T	protein histidine kinase activity	-	-	-	-	-	-	-	-	-	-	-	-	HATPase_c,HisKA,PAS_9,Response_reg
BYD3_k127_801300_2	472759.Nhal_3058	4.222e-76	262.0	COG0288@1|root,COG0288@2|Bacteria,1R3SC@1224|Proteobacteria,1RRB4@1236|Gammaproteobacteria,1WXB8@135613|Chromatiales	135613|Chromatiales	P	Reversible hydration of carbon dioxide	-	-	4.2.1.1	ko:K01673	ko00910,map00910	-	R00132,R10092	RC02807	ko00000,ko00001,ko01000	-	-	-	Pro_CA
BYD3_k127_8027976_4	1499967.BAYZ01000100_gene3468	1.562e-101	336.0	COG0655@1|root,COG0655@2|Bacteria	2|Bacteria	S	NAD(P)H dehydrogenase (quinone) activity	-	-	-	-	-	-	-	-	-	-	-	-	FMN_red
BYD3_k127_8027976_5	880070.Cycma_3864	1.152e-98	344.0	COG0457@1|root,COG2114@1|root,COG2207@1|root,COG5616@1|root,COG0457@2|Bacteria,COG2114@2|Bacteria,COG2207@2|Bacteria,COG5616@2|Bacteria,4NFW7@976|Bacteroidetes,47N72@768503|Cytophagia	976|Bacteroidetes	K	helix_turn_helix, arabinose operon control protein	-	-	-	-	-	-	-	-	-	-	-	-	ANAPC3,Guanylate_cyc,HTH_18,TPR_19,TPR_8
BYD3_k127_8027976_3	1211813.CAPH01000018_gene948	8.432e-147	477.0	COG3507@1|root,COG3507@2|Bacteria,4PKXQ@976|Bacteroidetes,2FM4J@200643|Bacteroidia	976|Bacteroidetes	G	Belongs to the glycosyl hydrolase 43 family	xynD_2	-	3.2.1.55	ko:K15921	ko00520,map00520	-	R01762	-	ko00000,ko00001,ko01000	-	CBM6,GH43	-	CBM_6,Glyco_hydro_43
BYD3_k127_8027976_1	504472.Slin_1945	5.454e-311	973.0	COG3408@1|root,COG3408@2|Bacteria,4NHHR@976|Bacteroidetes,47MK4@768503|Cytophagia	976|Bacteroidetes	G	Bacterial alpha-L-rhamnosidase C-terminal domain	-	-	-	-	-	-	-	-	-	-	-	-	Bac_rhamnosid,Bac_rhamnosid6H,Bac_rhamnosid_C,Bac_rhamnosid_N
BYD3_k127_8027976_0	1123248.KB893359_gene2090	0.0	1353.0	COG3408@1|root,COG4654@1|root,COG3408@2|Bacteria,COG4654@2|Bacteria,4NESP@976|Bacteroidetes,1INWR@117747|Sphingobacteriia	976|Bacteroidetes	G	PFAM Bacterial alpha-L-rhamnosidase	-	-	3.2.1.40	ko:K05989	-	-	-	-	ko00000,ko01000	-	-	-	Bac_rhamnosid,Bac_rhamnosid6H,Bac_rhamnosid_C,Bac_rhamnosid_N
BYD3_k127_8027976_2	1150600.ADIARSV_3218	9.644e-151	486.0	COG0641@1|root,COG0641@2|Bacteria,4NG1N@976|Bacteroidetes,1IUNW@117747|Sphingobacteriia	976|Bacteroidetes	C	Anaerobic sulfatase maturase	atsB	-	-	ko:K06871	-	-	-	-	ko00000	-	-	-	Fer4_12,Fer4_14,Radical_SAM,SPASM
BYD3_k127_8070390_0	1408473.JHXO01000007_gene983	9.688e-82	285.0	COG0614@1|root,COG0614@2|Bacteria,4NH9F@976|Bacteroidetes,2FMDS@200643|Bacteroidia	976|Bacteroidetes	P	ABC-type Fe3 -hydroxamate transport system, periplasmic component	-	-	-	ko:K02016	ko02010,map02010	M00240	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.14	-	-	Peripla_BP_2
BYD3_k127_8070390_4	1408473.JHXO01000007_gene982	1.389e-56	205.0	COG0609@1|root,COG0609@2|Bacteria,4NEDU@976|Bacteroidetes,2FNDK@200643|Bacteroidia	976|Bacteroidetes	P	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily	btuC	-	-	ko:K02015	ko02010,map02010	M00240	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.14	-	-	FecCD
BYD3_k127_8070390_6	742725.HMPREF9450_00789	9.519e-35	135.0	COG0609@1|root,COG0609@2|Bacteria,4NEDU@976|Bacteroidetes,2FNDK@200643|Bacteroidia,22U70@171550|Rikenellaceae	976|Bacteroidetes	P	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily	btuC	-	-	ko:K02015	ko02010,map02010	M00240	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.14	-	-	FecCD
BYD3_k127_8070390_1	1408473.JHXO01000007_gene981	5.986e-80	278.0	COG1120@1|root,COG1120@2|Bacteria,4NG1Q@976|Bacteroidetes,2FMCI@200643|Bacteroidia	976|Bacteroidetes	HP	ABC transporter, ATP-binding protein	-	-	3.6.3.34	ko:K02013	ko02010,map02010	M00240	-	-	ko00000,ko00001,ko00002,ko01000,ko02000	3.A.1.14	-	-	ABC_tran
BYD3_k127_8070390_2	1313421.JHBV01000015_gene5754	3.586e-71	251.0	COG1216@1|root,COG1216@2|Bacteria,4NQ7P@976|Bacteroidetes	976|Bacteroidetes	S	glycosyl transferase family 2	-	-	-	-	-	-	-	-	-	-	-	-	Glycos_transf_2
BYD3_k127_8070390_7	763034.HMPREF9446_00797	5.435e-07	59.0	2E6TM@1|root,331DG@2|Bacteria,4NYW8@976|Bacteroidetes,2FPEV@200643|Bacteroidia,4ANQK@815|Bacteroidaceae	976|Bacteroidetes	S	Protein of unknown function (DUF2490)	-	-	-	-	-	-	-	-	-	-	-	-	DUF2490
BYD3_k127_8070390_3	869213.JCM21142_215	5.289e-60	214.0	arCOG14808@1|root,308PC@2|Bacteria,4NR4D@976|Bacteroidetes,47PEP@768503|Cytophagia	976|Bacteroidetes	S	Domain of unknown function (DUF4956)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4956
BYD3_k127_8070390_5	1408473.JHXO01000007_gene719	3.076e-48	181.0	COG3025@1|root,COG3025@2|Bacteria,4NM6K@976|Bacteroidetes,2FNF2@200643|Bacteroidia	976|Bacteroidetes	S	VTC domain	-	-	-	-	-	-	-	-	-	-	-	-	VTC
BYD3_k127_8072401_4	1122176.KB903532_gene2712	5.289e-126	413.0	COG0613@1|root,COG0613@2|Bacteria,4NHZ5@976|Bacteroidetes,1ISEJ@117747|Sphingobacteriia	976|Bacteroidetes	S	Domain of unknown function	-	-	3.1.3.97	ko:K07053	-	-	R00188,R11188	RC00078	ko00000,ko01000	-	-	-	DUF5001,PHP
BYD3_k127_8072401_19	1267211.KI669560_gene912	8.431e-21	97.0	2AMB7@1|root,31C6A@2|Bacteria,4NQ8I@976|Bacteroidetes,1ITHM@117747|Sphingobacteriia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_8072401_14	1168034.FH5T_06965	3.503e-42	159.0	COG1959@1|root,COG1959@2|Bacteria,4NY03@976|Bacteroidetes,2FY7W@200643|Bacteroidia	976|Bacteroidetes	K	Transcriptional regulator	-	-	-	-	-	-	-	-	-	-	-	-	Rrf2
BYD3_k127_8072401_15	385682.AFSL01000084_gene1114	3.365e-28	121.0	COG2353@1|root,COG2353@2|Bacteria,4NTB0@976|Bacteroidetes,2FZSN@200643|Bacteroidia,3XK4G@558415|Marinilabiliaceae	976|Bacteroidetes	S	Pfam YceI-like domain	-	-	-	-	-	-	-	-	-	-	-	-	YceI
BYD3_k127_8072401_3	1408473.JHXO01000004_gene240	3.435e-144	468.0	2DBAQ@1|root,2Z848@2|Bacteria,4NFR9@976|Bacteroidetes,2FRYW@200643|Bacteroidia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_8072401_17	411154.GFO_1427	4.084e-27	119.0	COG2353@1|root,COG2353@2|Bacteria,4NQKY@976|Bacteroidetes,1I2Z5@117743|Flavobacteriia	976|Bacteroidetes	S	Belongs to the UPF0312 family	-	-	-	-	-	-	-	-	-	-	-	-	YceI
BYD3_k127_8072401_7	886379.AEWI01000050_gene3166	5.852e-89	308.0	COG2259@1|root,COG2259@2|Bacteria,4NGNF@976|Bacteroidetes,2G2Z3@200643|Bacteroidia,3XIYE@558415|Marinilabiliaceae	976|Bacteroidetes	S	DoxX	doxX	-	-	-	-	-	-	-	-	-	-	-	DoxX
BYD3_k127_8072401_8	742725.HMPREF9450_00496	1.371e-83	283.0	COG0125@1|root,COG0125@2|Bacteria,4NPI5@976|Bacteroidetes,2G1QI@200643|Bacteroidia,22UC8@171550|Rikenellaceae	976|Bacteroidetes	F	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis	tmk	-	2.7.4.9	ko:K00943	ko00240,ko01100,map00240,map01100	M00053	R02094,R02098	RC00002	ko00000,ko00001,ko00002,ko01000	-	-	-	Thymidylate_kin
BYD3_k127_8072401_6	484018.BACPLE_00692	7.112e-94	317.0	COG0294@1|root,COG0294@2|Bacteria,4NEYJ@976|Bacteroidetes,2FN1T@200643|Bacteroidia,4AKHH@815|Bacteroidaceae	976|Bacteroidetes	H	Psort location Cytoplasmic, score 8.96	folP	-	2.5.1.15	ko:K00796	ko00790,ko01100,map00790,map01100	M00126,M00841	R03066,R03067	RC00121,RC00842	ko00000,ko00001,ko00002,ko01000	-	-	-	Pterin_bind
BYD3_k127_8072401_11	880526.KE386488_gene161	4.615e-65	231.0	COG1624@1|root,COG1624@2|Bacteria,4NG3Z@976|Bacteroidetes,2FN6K@200643|Bacteroidia,22UCX@171550|Rikenellaceae	976|Bacteroidetes	S	Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria	dacA	-	-	-	-	-	-	-	-	-	-	-	DisA_N
BYD3_k127_8072401_10	1229276.DI53_2656	9.903e-66	231.0	COG0344@1|root,COG0344@2|Bacteria,4NMU3@976|Bacteroidetes,1IPFE@117747|Sphingobacteriia	976|Bacteroidetes	I	Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP	plsY	-	2.3.1.15	ko:K08591	ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110	M00089	R00851,R09380	RC00004,RC00039,RC00041	ko00000,ko00001,ko00002,ko01000,ko01004	-	-	-	G3P_acyltransf
BYD3_k127_8072401_1	1347393.HG726019_gene7791	2.227e-279	865.0	COG1866@1|root,COG1866@2|Bacteria,4NEGI@976|Bacteroidetes,2FNYK@200643|Bacteroidia,4AMYK@815|Bacteroidaceae	976|Bacteroidetes	H	Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA	pckA	GO:0003674,GO:0003824,GO:0004611,GO:0004612,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006006,GO:0006094,GO:0008150,GO:0008152,GO:0009058,GO:0016051,GO:0016829,GO:0016830,GO:0016831,GO:0019318,GO:0019319,GO:0044238,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046364,GO:0071704,GO:1901576	4.1.1.49	ko:K01610	ko00010,ko00020,ko00620,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00020,map00620,map00710,map01100,map01110,map01120,map01130,map01200	M00003,M00170	R00341	RC00002,RC02741	ko00000,ko00001,ko00002,ko01000	-	-	-	PEPCK_ATP
BYD3_k127_8072401_0	1304885.AUEY01000101_gene2140	0.0	1243.0	COG0574@1|root,COG1080@1|root,COG0574@2|Bacteria,COG1080@2|Bacteria,1MU0R@1224|Proteobacteria,42NDJ@68525|delta/epsilon subdivisions,2WJSH@28221|Deltaproteobacteria,2MIZ3@213118|Desulfobacterales	28221|Deltaproteobacteria	G	Belongs to the PEP-utilizing enzyme family	ppdK	-	2.7.9.1	ko:K01006	ko00620,ko00710,ko00720,ko01100,ko01120,ko01200,map00620,map00710,map00720,map01100,map01120,map01200	M00169,M00171,M00172,M00173	R00206	RC00002,RC00015	ko00000,ko00001,ko00002,ko01000	-	-	-	PEP-utilizers,PEP-utilizers_C,PPDK_N
BYD3_k127_8072401_5	1168034.FH5T_21275	1.401e-114	376.0	COG4974@1|root,COG4974@2|Bacteria,4NE0E@976|Bacteroidetes,2FP3B@200643|Bacteroidia	976|Bacteroidetes	D	tyrosine recombinase XerC	xerC	-	-	ko:K04763	-	-	-	-	ko00000,ko03036	-	-	-	Phage_int_SAM_1,Phage_integrase
BYD3_k127_8072401_2	1121904.ARBP01000004_gene836	1.302e-176	566.0	COG0469@1|root,COG0469@2|Bacteria,4NEEU@976|Bacteroidetes,47JS3@768503|Cytophagia	976|Bacteroidetes	G	Belongs to the pyruvate kinase family	pyk	-	2.7.1.40	ko:K00873	ko00010,ko00230,ko00620,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko04930,ko05165,ko05203,ko05230,map00010,map00230,map00620,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map04930,map05165,map05203,map05230	M00001,M00002,M00049,M00050	R00200,R00430,R01138,R01858,R02320	RC00002,RC00015	ko00000,ko00001,ko00002,ko01000,ko04131,ko04147	-	-	-	PK,PK_C
BYD3_k127_8072401_13	927658.AJUM01000041_gene1810	1.866e-42	165.0	COG0664@1|root,COG0664@2|Bacteria,4P3ES@976|Bacteroidetes,2FYTV@200643|Bacteroidia,3XKZ8@558415|Marinilabiliaceae	976|Bacteroidetes	T	Cyclic nucleotide-monophosphate binding domain	-	-	-	ko:K21562	-	-	-	-	ko00000,ko03000	-	-	-	HTH_Crp_2,cNMP_binding
BYD3_k127_8072401_18	1348635.BBJY01000005_gene3236	6.128e-21	96.0	COG0642@1|root,COG2205@2|Bacteria,1NRP8@1224|Proteobacteria,1SKTW@1236|Gammaproteobacteria,1Y32G@135623|Vibrionales	135623|Vibrionales	T	COG0642 Signal transduction histidine kinase	-	-	-	-	-	-	-	-	-	-	-	-	HATPase_c,HisKA,Response_reg
BYD3_k127_8072401_12	1168034.FH5T_16830	2.656e-49	179.0	COG1956@1|root,COG1956@2|Bacteria,4NM6D@976|Bacteroidetes,2FS26@200643|Bacteroidia	976|Bacteroidetes	T	GAF domain-containing protein	msrC	-	1.8.4.14	ko:K08968	ko00270,map00270	-	R02025	RC00639	ko00000,ko00001,ko01000	-	-	-	GAF,GAF_2
BYD3_k127_8072401_9	1047013.AQSP01000139_gene2339	8.004e-66	231.0	COG2836@1|root,COG2836@2|Bacteria	2|Bacteria	K	Biogenesis protein	-	-	-	-	-	-	-	-	-	-	-	-	DsbD_2
BYD3_k127_8072401_16	1168034.FH5T_19010	1.15e-27	115.0	COG1186@1|root,COG1186@2|Bacteria,4NQ41@976|Bacteroidetes,2FY9G@200643|Bacteroidia	976|Bacteroidetes	J	RF-1 domain	arfB	-	-	ko:K15034	-	-	-	-	ko00000,ko03012	-	-	-	RF-1
BYD3_k127_8097134_5	243924.LT42_17635	7.501e-31	122.0	COG0545@1|root,COG0545@2|Bacteria,1RDA1@1224|Proteobacteria,1RPMP@1236|Gammaproteobacteria	1236|Gammaproteobacteria	O	Peptidyl-prolyl cis-trans	fklB	GO:0000413,GO:0003674,GO:0003755,GO:0003824,GO:0005488,GO:0005515,GO:0005527,GO:0005528,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006464,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009987,GO:0016853,GO:0016859,GO:0018193,GO:0018208,GO:0019538,GO:0036211,GO:0042597,GO:0042802,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:0097159,GO:0140096,GO:1901363,GO:1901564	5.2.1.8	ko:K03773	-	-	-	-	ko00000,ko01000,ko03110	-	-	-	FKBP_C,FKBP_N
BYD3_k127_8097134_7	471854.Dfer_4853	5.235e-05	51.0	2CA51@1|root,2ZR3W@2|Bacteria,4P852@976|Bacteroidetes,47X0U@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_8097134_4	435591.BDI_2642	3.694e-39	152.0	COG1595@1|root,COG1595@2|Bacteria,4NQE0@976|Bacteroidetes,2FP26@200643|Bacteroidia,22YGU@171551|Porphyromonadaceae	976|Bacteroidetes	K	Sigma-70, region 4	rpoE	-	-	ko:K03088	-	-	-	-	ko00000,ko03021	-	-	-	Sigma70_r2,Sigma70_r4_2
BYD3_k127_8097134_6	411154.GFO_0526	8.732e-20	93.0	2E0NT@1|root,32W7U@2|Bacteria,4NTP9@976|Bacteroidetes,1I4V2@117743|Flavobacteriia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_8097134_2	1122925.KB895391_gene1569	1.809e-101	344.0	COG0668@1|root,COG0668@2|Bacteria,1TSHU@1239|Firmicutes,4HBC1@91061|Bacilli,26T2D@186822|Paenibacillaceae	91061|Bacilli	M	Mechanosensitive ion channel	-	-	-	ko:K16053	-	-	-	-	ko00000,ko02000	1.A.23.4.5	-	-	MS_channel
BYD3_k127_8097134_3	1168289.AJKI01000001_gene3662	6.688e-47	171.0	COG0347@1|root,COG0347@2|Bacteria,4NQG9@976|Bacteroidetes	976|Bacteroidetes	K	Belongs to the P(II) protein family	-	-	-	ko:K04751	ko02020,map02020	-	-	-	ko00000,ko00001	-	-	-	P-II
BYD3_k127_8097134_0	869213.JCM21142_72630	1.169e-203	642.0	COG0004@1|root,COG0004@2|Bacteria,4NDV2@976|Bacteroidetes,47K09@768503|Cytophagia	976|Bacteroidetes	P	Ammonium Transporter	-	-	-	ko:K03320	-	-	-	-	ko00000,ko02000	1.A.11	-	-	Ammonium_transp
BYD3_k127_8097134_1	385682.AFSL01000016_gene2016	6.491e-105	344.0	COG1217@1|root,COG1217@2|Bacteria,4NDVM@976|Bacteroidetes,2FMNU@200643|Bacteroidia,3XIKS@558415|Marinilabiliaceae	976|Bacteroidetes	T	Elongation factor G C-terminus	typA	-	-	ko:K06207	-	-	-	-	ko00000	-	-	-	EFG_C,GTP_EFTU,GTP_EFTU_D2
BYD3_k127_8097617_2	1168034.FH5T_18880	7.943e-32	126.0	COG3682@1|root,COG3682@2|Bacteria,4NNVM@976|Bacteroidetes,2FTZK@200643|Bacteroidia	976|Bacteroidetes	K	transcriptional regulator	-	-	-	-	-	-	-	-	-	-	-	-	Penicillinase_R
BYD3_k127_8097617_0	1168034.FH5T_13275	1.998e-284	884.0	COG3250@1|root,COG3250@2|Bacteria,4NFPC@976|Bacteroidetes,2FPUZ@200643|Bacteroidia	976|Bacteroidetes	G	Belongs to the glycosyl hydrolase 2 family	-	-	-	-	-	-	-	-	-	-	-	-	Glyco_hydro_2,Glyco_hydro_2_C,Glyco_hydro_2_N
BYD3_k127_8097617_1	1380600.AUYN01000009_gene1069	7.412e-173	563.0	COG0627@1|root,COG0627@2|Bacteria,4NPE4@976|Bacteroidetes	976|Bacteroidetes	S	Putative esterase	-	-	-	-	-	-	-	-	-	-	-	-	Esterase
BYD3_k127_8097617_3	1358423.N180_10405	1.513e-09	64.0	2DS2Y@1|root,33E9X@2|Bacteria,4NY47@976|Bacteroidetes,1IUIA@117747|Sphingobacteriia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_8100041_5	1550091.JROE01000002_gene793	4.777e-09	57.0	COG0262@1|root,COG0262@2|Bacteria,4NMP3@976|Bacteroidetes,1IRXK@117747|Sphingobacteriia	976|Bacteroidetes	H	PFAM RibD C-terminal domain	-	-	1.5.1.3	ko:K00287	ko00670,ko00790,ko01100,ko01523,map00670,map00790,map01100,map01523	M00126,M00840	R00936,R00937,R00939,R00940,R02235,R02236,R11765	RC00109,RC00110,RC00158	ko00000,ko00001,ko00002,ko01000	-	-	-	RibD_C
BYD3_k127_8100041_6	1348583.ATLH01000013_gene2724	3.522e-05	46.0	COG2801@1|root,COG2801@2|Bacteria,4NM64@976|Bacteroidetes,1HZ28@117743|Flavobacteriia,1FADJ@104264|Cellulophaga	976|Bacteroidetes	L	COGs COG2801 Transposase and inactivated derivatives	-	-	-	-	-	-	-	-	-	-	-	-	rve
BYD3_k127_8100041_2	1131812.JQMS01000001_gene1863	7.007e-51	182.0	COG1917@1|root,COG1917@2|Bacteria,4NT85@976|Bacteroidetes,1I9VT@117743|Flavobacteriia,2NWSR@237|Flavobacterium	976|Bacteroidetes	S	Cupin 2, conserved barrel domain protein	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_8100041_4	762984.HMPREF9445_01583	1.371e-26	116.0	COG1595@1|root,COG1595@2|Bacteria,4NNBY@976|Bacteroidetes,2FQ9M@200643|Bacteroidia,4AQ77@815|Bacteroidaceae	976|Bacteroidetes	K	RNA polymerase sigma-70 factor	-	-	-	ko:K03088	-	-	-	-	ko00000,ko03021	-	-	-	Sigma70_r2,Sigma70_r4_2
BYD3_k127_8100041_3	1122931.AUAE01000007_gene1347	7.561e-45	178.0	COG3712@1|root,COG3712@2|Bacteria,4NNTM@976|Bacteroidetes,2FQW4@200643|Bacteroidia,22Y0G@171551|Porphyromonadaceae	976|Bacteroidetes	PT	Domain of unknown function (DUF4974)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4974,FecR
BYD3_k127_8100041_0	1408473.JHXO01000005_gene1802	3e-323	1024.0	COG1629@1|root,COG1629@2|Bacteria,4NDXS@976|Bacteroidetes,2FN3Y@200643|Bacteroidia	976|Bacteroidetes	P	TonB-linked outer membrane protein, SusC RagA family	-	-	-	-	-	-	-	-	-	-	-	-	CarbopepD_reg_2,Plug,TonB_dep_Rec
BYD3_k127_8100041_1	1408473.JHXO01000005_gene1801	1.388e-159	519.0	COG0446@1|root,COG0446@2|Bacteria,4NDYU@976|Bacteroidetes,2FPUR@200643|Bacteroidia	976|Bacteroidetes	S	COG NOG26302 non supervised orthologous group	-	-	-	ko:K21572	-	-	-	-	ko00000,ko02000	8.A.46.1,8.A.46.3	-	-	SusD-like_3,SusD_RagB
BYD3_k127_8104706_1	1237149.C900_00996	2.169e-97	329.0	COG2870@1|root,COG2870@2|Bacteria,4NHUV@976|Bacteroidetes,47K45@768503|Cytophagia	976|Bacteroidetes	M	pfkB family carbohydrate kinase	rfaE	-	2.7.1.167,2.7.7.70	ko:K03272	ko00540,ko01100,map00540,map01100	M00064	R05644,R05646	RC00002,RC00078	ko00000,ko00001,ko00002,ko01000,ko01005	-	-	-	CTP_transf_like,PfkB
BYD3_k127_8104706_2	694427.Palpr_0103	7.062e-83	282.0	COG0177@1|root,COG0177@2|Bacteria,4NFF3@976|Bacteroidetes,2FM8U@200643|Bacteroidia,22WI0@171551|Porphyromonadaceae	976|Bacteroidetes	L	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate	nth	-	4.2.99.18	ko:K10773	ko03410,map03410	-	-	-	ko00000,ko00001,ko01000,ko03400	-	-	-	HhH-GPD
BYD3_k127_8104706_0	1408813.AYMG01000039_gene2261	0.0	1262.0	COG1793@1|root,COG3285@1|root,COG1793@2|Bacteria,COG3285@2|Bacteria,4NESR@976|Bacteroidetes,1IQI9@117747|Sphingobacteriia	976|Bacteroidetes	L	DNA ligase	-	-	6.5.1.1	ko:K01971	ko03450,map03450	-	R00381	RC00005	ko00000,ko00001,ko01000,ko03400	-	-	-	DNA_ligase_A_C,DNA_ligase_A_M,LigD_N
BYD3_k127_8104706_3	694427.Palpr_1013	2.162e-41	161.0	2C8FV@1|root,2Z871@2|Bacteria,4NGZJ@976|Bacteroidetes,2FX98@200643|Bacteroidia	976|Bacteroidetes	S	YtkA-like	-	-	-	-	-	-	-	-	-	-	-	-	YtkA
BYD3_k127_8130759_13	1047013.AQSP01000104_gene1405	5.049e-08	54.0	COG4591@1|root,COG4591@2|Bacteria,2NQG5@2323|unclassified Bacteria	2|Bacteria	M	MacB-like periplasmic core domain	-	-	-	ko:K02004,ko:K09808	ko02010,map02010	M00255,M00258	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1,3.A.1.125	-	-	FtsX,MacB_PCD
BYD3_k127_8130759_4	1122176.KB903587_gene4540	3.41e-142	464.0	COG4591@1|root,COG4591@2|Bacteria,4NJRI@976|Bacteroidetes	976|Bacteroidetes	M	COG4591 ABC-type transport system, involved in lipoprotein release, permease component	-	-	-	ko:K02004	-	M00258	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	FtsX,MacB_PCD
BYD3_k127_8130759_7	1123008.KB905694_gene1579	2.739e-98	326.0	COG2834@1|root,COG2834@2|Bacteria,4NIT5@976|Bacteroidetes,2FSCB@200643|Bacteroidia,231EA@171551|Porphyromonadaceae	976|Bacteroidetes	M	Outer membrane lipoprotein-sorting protein	-	-	-	-	-	-	-	-	-	-	-	-	LolA_like
BYD3_k127_8130759_1	595494.Tola_2337	1.641e-179	571.0	COG1055@1|root,COG1055@2|Bacteria	2|Bacteria	P	arsenite transmembrane transporter activity	-	-	-	-	-	-	-	-	-	-	-	-	CitMHS
BYD3_k127_8130759_0	1191523.MROS_2367	0.0	1040.0	COG3808@1|root,COG3808@2|Bacteria	2|Bacteria	C	hydrogen-translocating pyrophosphatase activity	hppA	-	3.6.1.1	ko:K01507,ko:K15987	ko00190,map00190	-	-	-	ko00000,ko00001,ko01000	3.A.10.1	-	-	H_PPase
BYD3_k127_8130759_8	1122605.KB893627_gene2919	3.221e-96	320.0	COG2133@1|root,COG2133@2|Bacteria,4NGMS@976|Bacteroidetes,1IS5S@117747|Sphingobacteriia	976|Bacteroidetes	G	Domain of Unknown Function (DUF1080)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1080
BYD3_k127_8130759_12	742726.HMPREF9448_02828	6.443e-45	167.0	COG1610@1|root,COG1610@2|Bacteria,4NQFI@976|Bacteroidetes,2FN46@200643|Bacteroidia,22Y3Y@171551|Porphyromonadaceae	976|Bacteroidetes	S	Glutamyl-tRNA amidotransferase	-	-	-	ko:K09117	-	-	-	-	ko00000	-	-	-	YqeY
BYD3_k127_8130759_10	886379.AEWI01000018_gene1261	1.059e-72	256.0	COG0206@1|root,COG0206@2|Bacteria,4NF8N@976|Bacteroidetes,2FMJV@200643|Bacteroidia,3XJRC@558415|Marinilabiliaceae	976|Bacteroidetes	D	Tubulin/FtsZ family, C-terminal domain	ftsZ	-	-	ko:K03531	ko04112,map04112	-	-	-	ko00000,ko00001,ko02048,ko03036,ko04812	-	-	-	FtsZ_C,Tubulin
BYD3_k127_8130759_9	1168289.AJKI01000011_gene365	2.664e-73	249.0	COG0206@1|root,COG0206@2|Bacteria,4NF8N@976|Bacteroidetes,2FMJV@200643|Bacteroidia,3XJRC@558415|Marinilabiliaceae	976|Bacteroidetes	D	Tubulin/FtsZ family, C-terminal domain	ftsZ	-	-	ko:K03531	ko04112,map04112	-	-	-	ko00000,ko00001,ko02048,ko03036,ko04812	-	-	-	FtsZ_C,Tubulin
BYD3_k127_8130759_3	869213.JCM21142_31299	1.451e-144	470.0	COG0849@1|root,COG0849@2|Bacteria,4NE0V@976|Bacteroidetes,47K6I@768503|Cytophagia	976|Bacteroidetes	D	Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring	ftsA	-	-	ko:K03590	ko04112,map04112	-	-	-	ko00000,ko00001,ko03036,ko04812	-	-	-	FtsA,SHS2_FTSA
BYD3_k127_8130759_11	1349822.NSB1T_14470	1.415e-48	184.0	COG1589@1|root,COG1589@2|Bacteria,4NGPN@976|Bacteroidetes,2FME2@200643|Bacteroidia,22XZ6@171551|Porphyromonadaceae	976|Bacteroidetes	M	Cell division protein FtsQ	ftsQ	-	-	ko:K03589	ko04112,map04112	-	-	-	ko00000,ko00001,ko03036	-	-	-	FtsQ
BYD3_k127_8130759_2	1235803.C825_01430	3.605e-146	477.0	COG0773@1|root,COG0773@2|Bacteria,4NE1V@976|Bacteroidetes,2FM6G@200643|Bacteroidia,22WMY@171551|Porphyromonadaceae	976|Bacteroidetes	M	Belongs to the MurCDEF family	murC	-	6.3.2.8	ko:K01924	ko00471,ko00550,ko01100,map00471,map00550,map01100	-	R03193	RC00064,RC00141	ko00000,ko00001,ko01000,ko01011	-	-	-	Mur_ligase,Mur_ligase_C,Mur_ligase_M
BYD3_k127_8130759_5	1121904.ARBP01000005_gene4500	1.03e-127	418.0	COG0707@1|root,COG0707@2|Bacteria,4NE6D@976|Bacteroidetes,47JXF@768503|Cytophagia	976|Bacteroidetes	M	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)	murG	-	2.4.1.227	ko:K02563	ko00550,ko01100,ko01502,ko04112,map00550,map01100,map01502,map04112	-	R05032,R05662	RC00005,RC00049	ko00000,ko00001,ko01000,ko01011	-	GT28	-	Glyco_tran_28_C,Glyco_transf_28
BYD3_k127_8130759_6	385682.AFSL01000082_gene1193	1.396e-105	357.0	COG0772@1|root,COG0772@2|Bacteria,4NFIM@976|Bacteroidetes,2FM93@200643|Bacteroidia,3XIMX@558415|Marinilabiliaceae	976|Bacteroidetes	D	Cell cycle protein	ftsW	-	-	ko:K03588	ko04112,map04112	-	-	-	ko00000,ko00001,ko02000,ko03036	2.A.103.1	-	-	FTSW_RODA_SPOVE
BYD3_k127_8198435_0	742725.HMPREF9450_00921	4.562e-263	820.0	COG0459@1|root,COG0459@2|Bacteria,4NDZM@976|Bacteroidetes,2FMH4@200643|Bacteroidia,22UPC@171550|Rikenellaceae	976|Bacteroidetes	O	Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions	groL	GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006457,GO:0006458,GO:0008150,GO:0009987,GO:0016465,GO:0032991,GO:0044183,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0051082,GO:0061077,GO:0101031,GO:1990220	-	ko:K04077	ko03018,ko04212,ko04940,ko05134,ko05152,map03018,map04212,map04940,map05134,map05152	-	-	-	ko00000,ko00001,ko03019,ko03029,ko03110,ko04147	-	-	-	Cpn60_TCP1
BYD3_k127_8198435_3	1349822.NSB1T_08355	8.562e-99	327.0	COG0745@1|root,COG0745@2|Bacteria,4NF1I@976|Bacteroidetes,2FNZV@200643|Bacteroidia,22WBV@171551|Porphyromonadaceae	976|Bacteroidetes	K	COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain	rprY	-	-	-	-	-	-	-	-	-	-	-	Response_reg,Trans_reg_C
BYD3_k127_8198435_4	1408473.JHXO01000001_gene2424	6.531e-95	328.0	COG0642@1|root,COG2205@2|Bacteria,4NEFW@976|Bacteroidetes,2FPG5@200643|Bacteroidia	976|Bacteroidetes	T	ATPase histidine kinase DNA gyrase B HSP90 domain protein	rprX	-	2.7.13.3	ko:K07636	ko02020,map02020	M00434	-	-	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	-	-	-	HATPase_c,HisKA
BYD3_k127_8198435_11	888832.HMPREF9420_1030	1.083e-23	111.0	COG0810@1|root,COG0810@2|Bacteria,4NMG7@976|Bacteroidetes,2FPKW@200643|Bacteroidia	976|Bacteroidetes	M	Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins	-	-	-	ko:K03832	-	-	-	-	ko00000,ko02000	2.C.1.1	-	-	TonB_C
BYD3_k127_8198435_7	1123277.KB893184_gene3956	6.104e-59	212.0	COG0811@1|root,COG0811@2|Bacteria,4NFIX@976|Bacteroidetes,47N0M@768503|Cytophagia	976|Bacteroidetes	U	PFAM MotA TolQ ExbB proton channel	exbB	-	-	ko:K03561	-	-	-	-	ko00000,ko02000	1.A.30.2.1	-	-	MotA_ExbB
BYD3_k127_8198435_9	1089547.KB913013_gene2250	9.613e-40	151.0	COG0848@1|root,COG0848@2|Bacteria,4NNI6@976|Bacteroidetes,47PPW@768503|Cytophagia	976|Bacteroidetes	U	Biopolymer transport protein ExbD TolR	exbD	-	-	ko:K03559	-	-	-	-	ko00000,ko02000	1.A.30.2.1	-	-	ExbD
BYD3_k127_8198435_12	755732.Fluta_1909	1.783e-14	79.0	2DNED@1|root,30W9S@2|Bacteria,4P9NX@976|Bacteroidetes,1IE9S@117743|Flavobacteriia,2PBY6@246874|Cryomorphaceae	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_8198435_6	742725.HMPREF9450_00698	7.648e-60	214.0	COG0571@1|root,COG0571@2|Bacteria,4NE0N@976|Bacteroidetes,2FMV3@200643|Bacteroidia,22UDE@171550|Rikenellaceae	976|Bacteroidetes	J	Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism	rnc	GO:0003674,GO:0003676,GO:0003723,GO:0003725,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004525,GO:0004540,GO:0005488,GO:0006139,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0032296,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0097159,GO:0140098,GO:1901360,GO:1901363	3.1.26.3	ko:K03685	ko03008,ko05205,map03008,map05205	-	-	-	ko00000,ko00001,ko01000,ko03009,ko03019,ko03036	-	-	-	Ribonucleas_3_3,dsrm
BYD3_k127_8198435_2	929556.Solca_3403	5.587e-196	618.0	COG0304@1|root,COG0304@2|Bacteria,4NEKC@976|Bacteroidetes,1IPBP@117747|Sphingobacteriia	976|Bacteroidetes	I	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP	fabF	-	2.3.1.179	ko:K09458	ko00061,ko00780,ko01100,ko01212,map00061,map00780,map01100,map01212	M00083,M00572	R04355,R04726,R04952,R04957,R04960,R04963,R04968,R07762,R10115,R10119	RC00039,RC02728,RC02729,RC02888	ko00000,ko00001,ko00002,ko01000,ko01004	-	-	-	Ketoacyl-synt_C,ketoacyl-synt
BYD3_k127_8198435_10	927658.AJUM01000034_gene225	8.106e-37	139.0	COG0236@1|root,COG0236@2|Bacteria,4NS6C@976|Bacteroidetes,2FTWG@200643|Bacteroidia,3XKCJ@558415|Marinilabiliaceae	976|Bacteroidetes	IQ	Phosphopantetheine attachment site	acpP	GO:0000035,GO:0000036,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0016053,GO:0019637,GO:0019752,GO:0019842,GO:0031177,GO:0032787,GO:0033218,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0044620,GO:0046394,GO:0046467,GO:0046493,GO:0048037,GO:0051192,GO:0071704,GO:0072330,GO:0072341,GO:0090407,GO:0140104,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509	-	ko:K02078	-	-	-	-	ko00000,ko00001	-	-	-	PP-binding
BYD3_k127_8198435_5	1121129.KB903360_gene3309	2.626e-70	243.0	COG0299@1|root,COG0299@2|Bacteria,4NNZP@976|Bacteroidetes,2FPNN@200643|Bacteroidia,22XY4@171551|Porphyromonadaceae	976|Bacteroidetes	F	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate	purN	-	2.1.2.2	ko:K11175	ko00230,ko00670,ko01100,ko01110,ko01130,map00230,map00670,map01100,map01110,map01130	M00048	R04325,R04326	RC00026,RC00197,RC01128	ko00000,ko00001,ko00002,ko01000	-	-	-	Formyl_trans_N
BYD3_k127_8198435_1	313606.M23134_06289	1.872e-219	705.0	COG4774@1|root,COG4774@2|Bacteria,4PKNF@976|Bacteroidetes,47XXH@768503|Cytophagia	976|Bacteroidetes	P	Carboxypeptidase regulatory-like domain	-	-	-	-	-	-	-	-	-	-	-	-	CarbopepD_reg_2,CarboxypepD_reg,Plug,TonB_dep_Rec
BYD3_k127_8198435_13	1250232.JQNJ01000001_gene3877	5.725e-05	48.0	COG2010@1|root,COG2010@2|Bacteria,4NQXA@976|Bacteroidetes,1I33C@117743|Flavobacteriia	976|Bacteroidetes	C	Cytochrome c	-	-	-	-	-	-	-	-	-	-	-	-	Cytochrom_C
BYD3_k127_8198435_8	714943.Mucpa_2557	1.78e-40	156.0	COG1680@1|root,COG1680@2|Bacteria,4NFUI@976|Bacteroidetes,1INWP@117747|Sphingobacteriia	976|Bacteroidetes	V	COGs COG1680 Beta-lactamase class C and other penicillin binding protein	-	-	-	-	-	-	-	-	-	-	-	-	Beta-lactamase,Beta-lactamase2,DUF3471
BYD3_k127_8225740_4	1408473.JHXO01000009_gene3488	5.729e-128	419.0	COG0667@1|root,COG0667@2|Bacteria,4P42C@976|Bacteroidetes	976|Bacteroidetes	C	Aldo Keto reductase	-	-	-	-	-	-	-	-	-	-	-	-	Aldo_ket_red
BYD3_k127_8225740_0	742767.HMPREF9456_00276	1.25e-262	817.0	COG0423@1|root,COG0423@2|Bacteria,4NE1C@976|Bacteroidetes,2FMM2@200643|Bacteroidia,22WCA@171551|Porphyromonadaceae	976|Bacteroidetes	J	Catalyzes the attachment of glycine to tRNA(Gly)	glyQS	-	6.1.1.14	ko:K01880	ko00970,map00970	M00359,M00360	R03654	RC00055,RC00523	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029	-	-	-	HGTP_anticodon,tRNA-synt_2b
BYD3_k127_8225740_1	880074.BARVI_07515	3.056e-228	717.0	COG0029@1|root,COG0029@2|Bacteria,4NGUE@976|Bacteroidetes,2FNMT@200643|Bacteroidia,22WRX@171551|Porphyromonadaceae	976|Bacteroidetes	H	Catalyzes the oxidation of L-aspartate to iminoaspartate	nadB	-	1.4.3.16	ko:K00278	ko00250,ko00760,ko01100,map00250,map00760,map01100	M00115	R00357,R00481	RC00006,RC02566	ko00000,ko00001,ko00002,ko01000	-	-	-	FAD_binding_2,Succ_DH_flav_C
BYD3_k127_8225740_3	742725.HMPREF9450_00320	1.097e-143	462.0	COG0042@1|root,COG0042@2|Bacteria,4NEN4@976|Bacteroidetes,2FM9Z@200643|Bacteroidia,22U6Z@171550|Rikenellaceae	976|Bacteroidetes	J	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines	dus	-	-	-	-	-	-	-	-	-	-	-	Dus
BYD3_k127_8225740_6	1168034.FH5T_08645	1.137e-56	210.0	COG1266@1|root,COG1266@2|Bacteria,4NHE1@976|Bacteroidetes,2FT47@200643|Bacteroidia	976|Bacteroidetes	S	CAAX protease self-immunity	-	-	-	ko:K07052	-	-	-	-	ko00000	-	-	-	Abi
BYD3_k127_8225740_7	1168289.AJKI01000002_gene2607	1.144e-56	206.0	28NZ3@1|root,2ZBW2@2|Bacteria,4NNDG@976|Bacteroidetes,2G2K7@200643|Bacteroidia,3XJIT@558415|Marinilabiliaceae	976|Bacteroidetes	S	Psort location Cytoplasmic, score 8.96	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_8225740_2	1047013.AQSP01000101_gene606	1.057e-154	501.0	COG0006@1|root,COG0006@2|Bacteria,2NP8P@2323|unclassified Bacteria	2|Bacteria	E	Metallopeptidase family M24	pepQ	GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006508,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008235,GO:0008237,GO:0008238,GO:0009056,GO:0009987,GO:0016787,GO:0016805,GO:0019538,GO:0030145,GO:0034641,GO:0043167,GO:0043169,GO:0043170,GO:0043171,GO:0043603,GO:0044237,GO:0044238,GO:0044248,GO:0044424,GO:0044444,GO:0044464,GO:0046872,GO:0046914,GO:0070011,GO:0070573,GO:0071704,GO:0140096,GO:1901564,GO:1901565,GO:1901575	3.4.11.9,3.4.13.9	ko:K01262,ko:K01271	-	-	-	-	ko00000,ko01000,ko01002	-	-	-	AMP_N,Peptidase_M24
BYD3_k127_8225740_5	1313301.AUGC01000001_gene1690	6.862e-80	271.0	COG0006@1|root,COG0006@2|Bacteria,4NG40@976|Bacteroidetes	976|Bacteroidetes	E	Aminopeptidase	pepP	-	3.4.11.9	ko:K01262	-	-	-	-	ko00000,ko01000,ko01002	-	-	-	AMP_N,Peptidase_M24
BYD3_k127_8245207_11	1178825.ALIH01000013_gene528	7.514e-20	92.0	COG1121@1|root,COG1121@2|Bacteria,4NHZ9@976|Bacteroidetes,1HYX6@117743|Flavobacteriia	976|Bacteroidetes	P	COG1121 ABC-type Mn Zn transport systems ATPase component	troB	-	3.6.3.35	ko:K11710,ko:K19973	ko02010,map02010	M00319,M00792	-	-	ko00000,ko00001,ko00002,ko01000,ko02000	3.A.1.15,3.A.1.15.15	-	-	ABC_tran
BYD3_k127_8245207_2	1121012.AUKX01000002_gene3429	1.029e-116	383.0	COG0803@1|root,COG0803@2|Bacteria,4NGMC@976|Bacteroidetes,1HWQH@117743|Flavobacteriia,23HT4@178469|Arenibacter	976|Bacteroidetes	P	Zinc-uptake complex component A periplasmic	mntA	-	-	ko:K09815,ko:K11707	ko02010,map02010	M00242,M00319	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.15,3.A.1.15.3,3.A.1.15.5	-	-	ZnuA
BYD3_k127_8245207_7	1380600.AUYN01000007_gene3299	3.096e-71	246.0	COG1321@1|root,COG1321@2|Bacteria,4NGUP@976|Bacteroidetes,1HXI2@117743|Flavobacteriia	976|Bacteroidetes	K	dependent repressor	-	-	-	ko:K03709	-	-	-	-	ko00000,ko03000	-	-	-	Fe_dep_repr_C,Fe_dep_repress,FeoA
BYD3_k127_8245207_10	1216967.L100_10999	4.75e-41	158.0	COG4922@1|root,COG4922@2|Bacteria,4NNH5@976|Bacteroidetes,1I23M@117743|Flavobacteriia,34RF3@308865|Elizabethkingia	976|Bacteroidetes	S	SnoaL-like polyketide cyclase	-	-	-	-	-	-	-	-	-	-	-	-	SnoaL,SnoaL_2
BYD3_k127_8245207_0	929556.Solca_2915	2.443e-154	498.0	COG0477@1|root,COG2814@2|Bacteria,4NESW@976|Bacteroidetes,1IPCU@117747|Sphingobacteriia	976|Bacteroidetes	EGP	PFAM Major Facilitator Superfamily	-	-	-	-	-	-	-	-	-	-	-	-	MFS_1,Sugar_tr
BYD3_k127_8245207_16	1121481.AUAS01000012_gene292	0.0008379	49.0	2DI3V@1|root,32UAD@2|Bacteria,4NUQE@976|Bacteroidetes,47RAW@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_8245207_3	714943.Mucpa_5264	6.014e-89	304.0	COG0668@1|root,COG0668@2|Bacteria,4NFX6@976|Bacteroidetes,1IQV9@117747|Sphingobacteriia	976|Bacteroidetes	M	mechanosensitive ion channel	-	-	-	-	-	-	-	-	-	-	-	-	MS_channel
BYD3_k127_8245207_15	743719.PaelaDRAFT_5336	3.276e-06	55.0	COG3871@1|root,COG3871@2|Bacteria,1V03K@1239|Firmicutes,4HE17@91061|Bacilli,26SKA@186822|Paenibacillaceae	91061|Bacilli	S	general stress protein	-	-	-	-	-	-	-	-	-	-	-	-	Pyrid_ox_like
BYD3_k127_8245207_5	32057.KB217478_gene1281	3.73e-79	284.0	COG0654@1|root,COG0654@2|Bacteria,1G5VZ@1117|Cyanobacteria,1HS4Z@1161|Nostocales	1117|Cyanobacteria	CH	FAD binding domain	-	-	-	-	-	-	-	-	-	-	-	-	FAD_binding_3
BYD3_k127_8245207_8	929556.Solca_3276	2.328e-53	198.0	COG0500@1|root,COG2226@2|Bacteria,4NM9E@976|Bacteroidetes,1ISSP@117747|Sphingobacteriia	976|Bacteroidetes	Q	Methyltransferase domain	-	-	-	-	-	-	-	-	-	-	-	-	Methyltransf_23,Methyltransf_25,Methyltransf_31
BYD3_k127_8245207_4	929562.Emtol_2967	4.915e-86	298.0	COG3424@1|root,COG3424@2|Bacteria,4NDZU@976|Bacteroidetes,47JU1@768503|Cytophagia	976|Bacteroidetes	Q	PFAM chalcone and stilbene	bcsA	-	-	-	-	-	-	-	-	-	-	-	Chal_sti_synt_C,Chal_sti_synt_N
BYD3_k127_8245207_6	929556.Solca_3274	2.054e-71	252.0	COG0382@1|root,COG0382@2|Bacteria,4NK26@976|Bacteroidetes,1IS1A@117747|Sphingobacteriia	976|Bacteroidetes	H	PFAM UbiA prenyltransferase family	-	-	2.5.1.74	ko:K02548	ko00130,ko01100,ko01110,map00130,map01100,map01110	M00116	R05617,R06858,R10757	RC02935,RC02936,RC03264	ko00000,ko00001,ko00002,ko01000,ko01006	-	-	-	UbiA
BYD3_k127_8245207_12	153721.MYP_2810	1.19e-18	91.0	2E8MZ@1|root,332ZD@2|Bacteria,4NUPF@976|Bacteroidetes,47SK4@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_8245207_14	411465.PEPMIC_00113	2.368e-08	61.0	COG2020@1|root,COG2020@2|Bacteria,1V7ZM@1239|Firmicutes,24KUQ@186801|Clostridia,22HXH@1570339|Peptoniphilaceae	186801|Clostridia	O	Phospholipid methyltransferase	-	-	-	-	-	-	-	-	-	-	-	-	PEMT
BYD3_k127_8245207_1	700598.Niako_1910	5.605e-145	468.0	COG0620@1|root,COG0620@2|Bacteria,4NJAH@976|Bacteroidetes,1IZXY@117747|Sphingobacteriia	976|Bacteroidetes	E	COGs COG0620 Methionine synthase II (cobalamin-independent)	-	-	2.1.1.14	ko:K00549	ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230	M00017	R04405,R09365	RC00035,RC00113,RC01241	ko00000,ko00001,ko00002,ko01000	-	-	-	Meth_synt_2
BYD3_k127_8245207_9	1265505.ATUG01000002_gene1702	2.224e-42	166.0	COG0701@1|root,COG0701@2|Bacteria,1MUN8@1224|Proteobacteria,42UHV@68525|delta/epsilon subdivisions,2WQCZ@28221|Deltaproteobacteria	28221|Deltaproteobacteria	S	Predicted permease	-	-	-	-	-	-	-	-	-	-	-	-	ArsP_1
BYD3_k127_8274254_13	679935.Alfi_1959	4.974e-22	100.0	COG4775@1|root,COG4775@2|Bacteria,4NE80@976|Bacteroidetes,2FM1J@200643|Bacteroidia,22UA7@171550|Rikenellaceae	976|Bacteroidetes	M	Surface antigen	-	-	-	-	-	-	-	-	-	-	-	-	Bac_surface_Ag,POTRA
BYD3_k127_8274254_8	1349822.NSB1T_02620	2.291e-57	209.0	COG0566@1|root,COG0566@2|Bacteria,4NG1U@976|Bacteroidetes,2FNE2@200643|Bacteroidia,22WK6@171551|Porphyromonadaceae	976|Bacteroidetes	J	RNA methyltransferase	aviRb	-	-	ko:K03437	-	-	-	-	ko00000,ko03016	-	-	-	SpoU_methylase,SpoU_sub_bind
BYD3_k127_8274254_14	1148.1652727	1.583e-16	84.0	COG1359@1|root,COG1359@2|Bacteria,1G94C@1117|Cyanobacteria,1H5XK@1142|Synechocystis	1117|Cyanobacteria	S	Antibiotic biosynthesis monooxygenase	-	GO:0003674,GO:0003824	-	-	-	-	-	-	-	-	-	-	ABM
BYD3_k127_8274254_2	1123248.KB893321_gene544	6.478e-181	593.0	COG1629@1|root,COG4771@2|Bacteria,4NF4B@976|Bacteroidetes,1IW7P@117747|Sphingobacteriia	976|Bacteroidetes	P	TonB dependent receptor	-	-	-	-	-	-	-	-	-	-	-	-	CarbopepD_reg_2,Plug,TonB_dep_Rec
BYD3_k127_8274254_7	929556.Solca_0704	1.677e-59	216.0	2BG4X@1|root,33858@2|Bacteria,4NW0E@976|Bacteroidetes,1IUAK@117747|Sphingobacteriia	976|Bacteroidetes	S	Domain of unknown function (DUF4249)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4249
BYD3_k127_8274254_12	1168289.AJKI01000041_gene3315	2.579e-32	142.0	2AD4K@1|root,312T3@2|Bacteria,4PHRG@976|Bacteroidetes,2G1MR@200643|Bacteroidia,3XJYV@558415|Marinilabiliaceae	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_8274254_6	927658.AJUM01000010_gene1358	2.046e-64	229.0	COG1164@1|root,COG1164@2|Bacteria,4NFV3@976|Bacteroidetes,2FMG8@200643|Bacteroidia,3XKPK@558415|Marinilabiliaceae	976|Bacteroidetes	E	Oligoendopeptidase f	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_8274254_3	1408473.JHXO01000008_gene2755	1.693e-173	553.0	COG1164@1|root,COG1164@2|Bacteria,4NFV3@976|Bacteroidetes,2FMG8@200643|Bacteroidia	976|Bacteroidetes	E	Oligoendopeptidase f	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_8274254_0	1121481.AUAS01000012_gene301	1.452e-190	629.0	COG4932@1|root,COG4932@2|Bacteria,4PM22@976|Bacteroidetes,47XZY@768503|Cytophagia	976|Bacteroidetes	M	Outer membrane protein beta-barrel family	-	-	-	-	-	-	-	-	-	-	-	-	CarbopepD_reg_2,CarboxypepD_reg,OMP_b-brl_3
BYD3_k127_8274254_10	694427.Palpr_0209	1.154e-43	162.0	COG0239@1|root,COG0239@2|Bacteria,4NV3N@976|Bacteroidetes,2FUP5@200643|Bacteroidia,22YRC@171551|Porphyromonadaceae	976|Bacteroidetes	D	Important for reducing fluoride concentration in the cell, thus reducing its toxicity	crcB	GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006820,GO:0008150,GO:0008509,GO:0015075,GO:0015103,GO:0015318,GO:0015698,GO:0016020,GO:0016021,GO:0022857,GO:0031224,GO:0031226,GO:0034220,GO:0044425,GO:0044459,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071944,GO:0098656,GO:0098660,GO:0098661,GO:1903424,GO:1903425	-	ko:K06199	-	-	-	-	ko00000,ko02000	1.A.43.1,1.A.43.2,1.A.43.3	-	-	CRCB
BYD3_k127_8274254_11	694427.Palpr_0210	2.465e-38	146.0	COG1993@1|root,COG1993@2|Bacteria,4NVRH@976|Bacteroidetes,2FV2T@200643|Bacteroidia	976|Bacteroidetes	S	Uncharacterized ACR, COG1993	-	-	-	ko:K09137	-	-	-	-	ko00000	-	-	-	DUF190
BYD3_k127_8274254_1	694427.Palpr_0173	1.196e-183	588.0	COG2509@1|root,COG2509@2|Bacteria,4NEUQ@976|Bacteroidetes,2FM1G@200643|Bacteroidia,22XCV@171551|Porphyromonadaceae	976|Bacteroidetes	S	FAD-binding protein	-	-	-	ko:K07137	-	-	-	-	ko00000	-	-	-	FAD_binding_2,FAD_binding_3,GIDA,HI0933_like,Pyr_redox_2
BYD3_k127_8274254_9	385682.AFSL01000100_gene40	4.706e-48	181.0	2C52N@1|root,2Z7U1@2|Bacteria,4NEZW@976|Bacteroidetes,2FNRZ@200643|Bacteroidia,3XJ3D@558415|Marinilabiliaceae	976|Bacteroidetes	S	Outer membrane protein beta-barrel domain	porT	-	-	-	-	-	-	-	-	-	-	-	OMP_b-brl_2
BYD3_k127_8274254_4	1124780.ANNU01000072_gene1065	1.242e-133	434.0	COG2055@1|root,COG2055@2|Bacteria,4NGVC@976|Bacteroidetes,47KBZ@768503|Cytophagia	976|Bacteroidetes	C	Belongs to the LDH2 MDH2 oxidoreductase family	-	-	-	-	-	-	-	-	-	-	-	-	Ldh_2
BYD3_k127_8274254_5	385682.AFSL01000100_gene47	1.594e-98	327.0	COG0778@1|root,COG0778@2|Bacteria,4NJ80@976|Bacteroidetes,2FNX6@200643|Bacteroidia,3XJJH@558415|Marinilabiliaceae	976|Bacteroidetes	C	Nitroreductase family	-	-	1.5.1.38,1.5.1.39	ko:K19285,ko:K19286	ko00740,ko01100,map00740,map01100	-	R05705,R05706	RC00126	ko00000,ko00001,ko01000	-	-	-	Nitroreductase
BYD3_k127_827859_6	1047013.AQSP01000104_gene1405	6.372e-124	408.0	COG4591@1|root,COG4591@2|Bacteria,2NQG5@2323|unclassified Bacteria	2|Bacteria	M	MacB-like periplasmic core domain	-	-	-	ko:K02004,ko:K09808	ko02010,map02010	M00255,M00258	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1,3.A.1.125	-	-	FtsX,MacB_PCD
BYD3_k127_827859_8	1047013.AQSP01000104_gene1406	1.722e-95	317.0	COG1136@1|root,COG1136@2|Bacteria,2NQFK@2323|unclassified Bacteria	2|Bacteria	V	ATPases associated with a variety of cellular activities	-	-	-	ko:K02003	-	M00258	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	ABC_tran
BYD3_k127_827859_7	1123008.KB905694_gene1581	1.467e-123	407.0	28HAJ@1|root,2Z7MX@2|Bacteria,4NKQQ@976|Bacteroidetes	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_827859_11	1313421.JHBV01000042_gene3351	2.295e-42	162.0	COG1309@1|root,COG1309@2|Bacteria,4NU6H@976|Bacteroidetes	976|Bacteroidetes	K	Bacterial regulatory proteins, tetR family	-	-	-	-	-	-	-	-	-	-	-	-	TetR_N
BYD3_k127_827859_5	1453498.LG45_11060	4.743e-131	428.0	COG3004@1|root,COG3004@2|Bacteria,4NFC4@976|Bacteroidetes,1HXXZ@117743|Flavobacteriia,2NS9U@237|Flavobacterium	976|Bacteroidetes	P	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons	nhaA	-	-	ko:K03313	-	-	-	-	ko00000,ko02000	2.A.33.1	-	-	Na_H_antiport_1
BYD3_k127_827859_4	1123248.KB893386_gene1888	1.038e-138	453.0	COG1055@1|root,COG1055@2|Bacteria,4NGP4@976|Bacteroidetes,1IVHN@117747|Sphingobacteriia	976|Bacteroidetes	P	COG1055 Na H antiporter NhaD and related arsenite	nhaD	-	-	-	-	-	-	-	-	-	-	-	CitMHS
BYD3_k127_827859_9	926562.Oweho_2422	1.117e-91	308.0	COG2908@1|root,COG2908@2|Bacteria,4NEF1@976|Bacteroidetes,1HWZZ@117743|Flavobacteriia,2PADT@246874|Cryomorphaceae	976|Bacteroidetes	S	Calcineurin-like phosphoesterase	lpxH	-	3.6.1.54	ko:K03269	ko00540,ko01100,map00540,map01100	M00060	R04549	RC00002	ko00000,ko00001,ko00002,ko01000,ko01005	-	-	-	Metallophos,Metallophos_2
BYD3_k127_827859_10	869213.JCM21142_347	1.424e-57	215.0	COG0450@1|root,COG0450@2|Bacteria	2|Bacteria	O	alkyl hydroperoxide reductase	-	-	-	-	-	-	-	-	-	-	-	-	AhpC-TSA,DUF4369,Thioredoxin_8
BYD3_k127_827859_12	1288963.ADIS_4640	4.637e-37	154.0	COG0526@1|root,COG0526@2|Bacteria,4NEX3@976|Bacteroidetes,47JZP@768503|Cytophagia	976|Bacteroidetes	O	PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen	ccmG	-	-	-	-	-	-	-	-	-	-	-	AhpC-TSA,DUF4369
BYD3_k127_827859_1	1121129.KB903359_gene1232	6.063e-248	782.0	COG3408@1|root,COG3408@2|Bacteria,4NF09@976|Bacteroidetes,2FMEX@200643|Bacteroidia,22X3H@171551|Porphyromonadaceae	976|Bacteroidetes	G	Glycogen debranching enzyme	-	-	-	-	-	-	-	-	-	-	-	-	GDE_C,GDE_N
BYD3_k127_827859_3	869213.JCM21142_52278	8.035e-184	583.0	COG0297@1|root,COG0297@2|Bacteria,4PKP8@976|Bacteroidetes,47JA2@768503|Cytophagia	976|Bacteroidetes	G	Starch synthase catalytic domain	-	-	-	-	-	-	-	-	-	-	-	-	Glyco_transf_4,Glyco_transf_5,Glycos_transf_1
BYD3_k127_827859_2	869213.JCM21142_52279	9.017e-193	613.0	COG1449@1|root,COG1449@2|Bacteria,4NFXW@976|Bacteroidetes,47P2J@768503|Cytophagia	976|Bacteroidetes	G	Belongs to the glycosyl hydrolase 57 family	amyA	-	3.2.1.1	ko:K07405	ko00500,ko01100,map00500,map01100	-	R02108,R02112,R11262	-	ko00000,ko00001,ko01000	-	GH57	-	Glyco_hydro_57
BYD3_k127_827859_0	709991.Odosp_0296	0.0	1542.0	COG0058@1|root,COG0297@1|root,COG0058@2|Bacteria,COG0297@2|Bacteria,4NGR1@976|Bacteroidetes,2FNN5@200643|Bacteroidia,22WPC@171551|Porphyromonadaceae	976|Bacteroidetes	G	alpha-glucan phosphorylase	glgP	-	2.4.1.1,2.4.1.11,2.4.1.8	ko:K00688,ko:K00691,ko:K16153	ko00500,ko01100,ko01110,ko02026,ko04217,ko04910,ko04922,ko04931,map00500,map01100,map01110,map02026,map04217,map04910,map04922,map04931	-	R00292,R01555,R02111	RC00005,RC00049	ko00000,ko00001,ko01000,ko01003	-	GH65,GT3,GT35	-	DUF3417,Glycogen_syn,Phosphorylase
BYD3_k127_827859_13	1168034.FH5T_10795	3.992e-15	76.0	COG0608@1|root,COG0608@2|Bacteria,4NDW1@976|Bacteroidetes,2FMH0@200643|Bacteroidia	976|Bacteroidetes	L	single-stranded-DNA-specific exonuclease recJ	recJ	-	-	ko:K07462	ko03410,ko03430,ko03440,map03410,map03430,map03440	-	-	-	ko00000,ko00001,ko01000,ko03400	-	-	-	DHH,DHHA1
BYD3_k127_832008_5	1123248.KB893317_gene4337	1.635e-95	318.0	COG1273@1|root,COG1273@2|Bacteria,4NHHQ@976|Bacteroidetes,1IR53@117747|Sphingobacteriia	976|Bacteroidetes	L	With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD	ku	-	-	ko:K10979	ko03450,map03450	-	-	-	ko00000,ko00001,ko03400	-	-	-	Ku
BYD3_k127_832008_1	926549.KI421517_gene810	9.673e-178	564.0	COG2723@1|root,COG2723@2|Bacteria,4NI2I@976|Bacteroidetes,47KM2@768503|Cytophagia	976|Bacteroidetes	G	Belongs to the glycosyl hydrolase 1 family	-	-	-	-	-	-	-	-	-	-	-	-	Glyco_hydro_1
BYD3_k127_832008_0	56107.Cylst_0865	2.945e-214	687.0	COG1091@1|root,COG2723@1|root,COG1091@2|Bacteria,COG2723@2|Bacteria,1G1JP@1117|Cyanobacteria,1HKQN@1161|Nostocales	1117|Cyanobacteria	GM	Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose	-	-	1.1.1.133	ko:K00067	ko00521,ko00523,ko01130,map00521,map00523,map01130	M00793	R02777	RC00182	ko00000,ko00001,ko00002,ko01000	-	-	-	Glyco_hydro_1,RmlD_sub_bind
BYD3_k127_832008_3	63737.Npun_F0220	2.303e-126	417.0	COG0438@1|root,COG0562@1|root,COG0438@2|Bacteria,COG0562@2|Bacteria,1G3KR@1117|Cyanobacteria,1HIYN@1161|Nostocales	1117|Cyanobacteria	M	PFAM UDP-galactopyranose mutase	-	-	5.4.99.9	ko:K01854	ko00052,ko00520,map00052,map00520	-	R00505,R09009	RC00317,RC02396	ko00000,ko00001,ko01000	-	-	-	GLF,Glyco_trans_1_4,NAD_binding_8
BYD3_k127_832008_2	1250005.PHEL85_0274	5.36e-163	522.0	COG0562@1|root,COG0562@2|Bacteria,4NGXU@976|Bacteroidetes,1HWK2@117743|Flavobacteriia	976|Bacteroidetes	M	UDP-galactopyranose mutase	glf	-	5.4.99.9	ko:K01854	ko00052,ko00520,map00052,map00520	-	R00505,R09009	RC00317,RC02396	ko00000,ko00001,ko01000	-	-	-	GLF,NAD_binding_8
BYD3_k127_832008_4	755732.Fluta_2918	3.693e-101	343.0	COG2982@1|root,COG2982@2|Bacteria,4NIE2@976|Bacteroidetes,1HZC9@117743|Flavobacteriia,2PAV2@246874|Cryomorphaceae	976|Bacteroidetes	M	Domain of Unknown Function (DUF748)	-	-	-	-	-	-	-	-	-	-	-	-	DUF748
BYD3_k127_832008_6	471854.Dfer_2749	2.937e-43	162.0	COG2204@1|root,COG2204@2|Bacteria,4NE89@976|Bacteroidetes,47N6B@768503|Cytophagia	976|Bacteroidetes	T	two component, sigma54 specific, transcriptional regulator, Fis family	-	-	-	ko:K07713	ko02020,map02020	M00499	-	-	ko00000,ko00001,ko00002,ko02022	-	-	-	HTH_8,Response_reg,Sigma54_activat
BYD3_k127_8340548_0	525373.HMPREF0766_11688	1.588e-132	434.0	COG2855@1|root,COG2855@2|Bacteria,4NES6@976|Bacteroidetes,1IQMA@117747|Sphingobacteriia	976|Bacteroidetes	S	PFAM Uncharacterised protein family UPF0324	-	-	-	-	-	-	-	-	-	-	-	-	Cons_hypoth698
BYD3_k127_8340548_2	1122971.BAME01000065_gene4761	1.657e-35	149.0	COG3746@1|root,COG3746@2|Bacteria,4NIID@976|Bacteroidetes,2FN19@200643|Bacteroidia,22Z0H@171551|Porphyromonadaceae	976|Bacteroidetes	P	Phosphate-selective porin O and P	-	-	-	-	-	-	-	-	-	-	-	-	Porin_4,Porin_O_P
BYD3_k127_8340548_1	1168034.FH5T_09375	2.44e-46	179.0	COG4372@1|root,COG4372@2|Bacteria,4NJGZ@976|Bacteroidetes,2G2H0@200643|Bacteroidia	976|Bacteroidetes	S	Transposase	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_8343283_14	929703.KE386491_gene3424	4.922e-11	72.0	COG1629@1|root,COG2373@1|root,COG1629@2|Bacteria,COG2373@2|Bacteria,4NG2S@976|Bacteroidetes,47K94@768503|Cytophagia	976|Bacteroidetes	P	TonB-dependent Receptor Plug Domain	-	-	-	-	-	-	-	-	-	-	-	-	A2M,A2M_N,A2M_comp,A2M_recep,Plug,Thiol-ester_cl
BYD3_k127_8343283_15	1122605.KB893646_gene191	1.645e-08	66.0	28I8D@1|root,2Z8B7@2|Bacteria,4NM23@976|Bacteroidetes,1ISNF@117747|Sphingobacteriia	976|Bacteroidetes	S	Domain of unknown function (DUF4249)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4249
BYD3_k127_8343283_3	694427.Palpr_1032	2.289e-198	649.0	COG1470@1|root,COG1629@1|root,COG1470@2|Bacteria,COG4771@2|Bacteria,4NF4B@976|Bacteroidetes,2FM7I@200643|Bacteroidia,22XCB@171551|Porphyromonadaceae	976|Bacteroidetes	P	TonB-dependent receptor plug domain	-	-	-	-	-	-	-	-	-	-	-	-	CarbopepD_reg_2,Plug,TonB_dep_Rec
BYD3_k127_8343283_5	869213.JCM21142_72887	1.116e-155	518.0	COG0457@1|root,COG0457@2|Bacteria,4PC6C@976|Bacteroidetes,47WVW@768503|Cytophagia	976|Bacteroidetes	S	Tetratricopeptide repeats	-	-	-	-	-	-	-	-	-	-	-	-	TPR_8
BYD3_k127_8343283_11	1313301.AUGC01000010_gene953	5.972e-72	249.0	COG0705@1|root,COG0705@2|Bacteria,4NS52@976|Bacteroidetes	976|Bacteroidetes	S	Rhomboid family	-	-	-	-	-	-	-	-	-	-	-	-	Rhomboid
BYD3_k127_8343283_12	694427.Palpr_0066	1.417e-65	236.0	COG0697@1|root,COG0697@2|Bacteria,4NNBQ@976|Bacteroidetes,2G21D@200643|Bacteroidia,22YNE@171551|Porphyromonadaceae	976|Bacteroidetes	EG	EamA-like transporter family	eamA	-	-	-	-	-	-	-	-	-	-	-	EamA
BYD3_k127_8343283_7	1408473.JHXO01000011_gene3145	2.531e-129	418.0	COG0568@1|root,COG0568@2|Bacteria,4NEBF@976|Bacteroidetes,2FNVQ@200643|Bacteroidia	976|Bacteroidetes	K	Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released	rpoD	-	-	ko:K03086	-	-	-	-	ko00000,ko03021	-	-	-	Sigma70_r1_2,Sigma70_r2,Sigma70_r3,Sigma70_r4
BYD3_k127_8343283_1	457424.BFAG_01869	9.904e-290	903.0	COG0296@1|root,COG0296@2|Bacteria,4NECZ@976|Bacteroidetes,2FMTG@200643|Bacteroidia,4AKAA@815|Bacteroidaceae	976|Bacteroidetes	G	1,4-alpha-glucan branching enzyme	glgB	-	2.4.1.18	ko:K00700	ko00500,ko01100,ko01110,map00500,map01100,map01110	M00565	R02110	-	ko00000,ko00001,ko00002,ko01000,ko04147	-	CBM48,GH13	-	Alpha-amylase,Alpha-amylase_C,CBM_48
BYD3_k127_8343283_10	1237149.C900_01189	5.217e-86	295.0	COG0196@1|root,COG0196@2|Bacteria,4NEI9@976|Bacteroidetes,47JNP@768503|Cytophagia	976|Bacteroidetes	H	Belongs to the ribF family	ribF	-	2.7.1.26,2.7.7.2	ko:K11753	ko00740,ko01100,ko01110,map00740,map01100,map01110	M00125	R00161,R00549	RC00002,RC00017	ko00000,ko00001,ko00002,ko01000	-	-	-	FAD_syn,Flavokinase
BYD3_k127_8343283_2	1123008.KB905705_gene954	1.562e-262	813.0	COG0499@1|root,COG0499@2|Bacteria,4NEKE@976|Bacteroidetes,2FPWZ@200643|Bacteroidia,22W9Y@171551|Porphyromonadaceae	976|Bacteroidetes	H	May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine	ahcY	GO:0000096,GO:0003674,GO:0003824,GO:0004013,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006520,GO:0006534,GO:0006555,GO:0006575,GO:0006725,GO:0006732,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009066,GO:0009069,GO:0009116,GO:0009119,GO:0009987,GO:0016787,GO:0016801,GO:0016802,GO:0017144,GO:0019752,GO:0033353,GO:0034641,GO:0042278,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046128,GO:0046439,GO:0046483,GO:0046498,GO:0046500,GO:0051186,GO:0055086,GO:0071704,GO:0072521,GO:1901135,GO:1901360,GO:1901564,GO:1901605,GO:1901657	3.3.1.1	ko:K01251	ko00270,ko01100,map00270,map01100	M00035	R00192,R04936	RC00056,RC00069,RC01161,RC01243	ko00000,ko00001,ko00002,ko01000,ko01009,ko04147	-	-	-	AdoHcyase,AdoHcyase_NAD
BYD3_k127_8343283_4	1121920.AUAU01000020_gene2550	7.468e-192	610.0	COG0433@1|root,COG0433@2|Bacteria,3Y69X@57723|Acidobacteria	57723|Acidobacteria	S	Bacterial protein of unknown function (DUF853)	-	-	-	-	-	-	-	-	-	-	-	-	DUF853
BYD3_k127_8343283_8	1168034.FH5T_21180	6.836e-125	406.0	COG2084@1|root,COG2084@2|Bacteria,4NEF7@976|Bacteroidetes	976|Bacteroidetes	I	PFAM 6-phosphogluconate dehydrogenase NAD-binding	mmsB	-	1.1.1.31	ko:K00020	ko00280,ko01100,map00280,map01100	-	R05066	RC00099	ko00000,ko00001,ko01000	-	-	-	NAD_binding_11,NAD_binding_2
BYD3_k127_8343283_0	1469557.JSWF01000025_gene1352	5.555e-306	953.0	COG0823@1|root,COG1506@1|root,COG0823@2|Bacteria,COG1506@2|Bacteria,4NETS@976|Bacteroidetes,1HZ7E@117743|Flavobacteriia	976|Bacteroidetes	EU	peptidase	-	-	3.4.14.5	ko:K01278	ko04974,map04974	-	-	-	ko00000,ko00001,ko01000,ko01002,ko04090,ko04147	-	-	-	DPPIV_N,Peptidase_S9
BYD3_k127_8343283_13	1220534.B655_2000	2.771e-37	145.0	COG5646@1|root,arCOG09457@2157|Archaea,2Y1ED@28890|Euryarchaeota	28890|Euryarchaeota	S	Domain of unknown function (DU1801)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1801
BYD3_k127_8343283_9	1233950.IW22_17215	1.722e-102	338.0	COG0693@1|root,COG0693@2|Bacteria,4NGII@976|Bacteroidetes,1HWTK@117743|Flavobacteriia,3ZRD3@59732|Chryseobacterium	976|Bacteroidetes	S	DJ-1/PfpI family	-	-	-	-	-	-	-	-	-	-	-	-	DJ-1_PfpI
BYD3_k127_8343283_6	1121011.AUCB01000002_gene516	8.479e-139	449.0	COG4123@1|root,COG4123@2|Bacteria,4NGDY@976|Bacteroidetes,1HZFW@117743|Flavobacteriia,23FUP@178469|Arenibacter	976|Bacteroidetes	S	Dimerisation domain	-	-	-	-	-	-	-	-	-	-	-	-	Dimerisation2,Methyltransf_2
BYD3_k127_8368323_1	742817.HMPREF9449_00966	4.504e-122	407.0	COG0772@1|root,COG0772@2|Bacteria,4NDZD@976|Bacteroidetes,2FNA1@200643|Bacteroidia,22W55@171551|Porphyromonadaceae	976|Bacteroidetes	D	Belongs to the SEDS family	rodA	-	-	ko:K05837	-	-	-	-	ko00000,ko03036	-	-	-	FTSW_RODA_SPOVE
BYD3_k127_8368323_0	869213.JCM21142_72908	3.386e-224	709.0	COG0768@1|root,COG0768@2|Bacteria,4NE47@976|Bacteroidetes,47JSM@768503|Cytophagia	976|Bacteroidetes	M	Penicillin-binding protein, dimerisation domain	mrdA	-	3.4.16.4	ko:K05515	ko00550,ko01501,map00550,map01501	-	-	-	ko00000,ko00001,ko01000,ko01011	-	-	-	PBP_dimer,Transpeptidase
BYD3_k127_8368323_4	1408473.JHXO01000011_gene2964	1.909e-43	164.0	2AFDM@1|root,315DF@2|Bacteria,4NQ5K@976|Bacteroidetes,2FPJA@200643|Bacteroidia	976|Bacteroidetes	S	rod shape-determining protein MreD	mreD	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_8368323_3	1408473.JHXO01000011_gene2963	4.914e-67	237.0	COG1792@1|root,COG1792@2|Bacteria,4NF14@976|Bacteroidetes,2FMWS@200643|Bacteroidia	976|Bacteroidetes	M	shape-determining protein MreC	mreC	-	-	ko:K03570	-	-	-	-	ko00000,ko03036	9.B.157.1	-	-	MreC
BYD3_k127_8368323_2	927658.AJUM01000037_gene2181	4.586e-68	233.0	COG1077@1|root,COG1077@2|Bacteria,4NETQ@976|Bacteroidetes,2FM2I@200643|Bacteroidia,3XJ8N@558415|Marinilabiliaceae	976|Bacteroidetes	D	Actin	mreB	-	-	ko:K03569	-	-	-	-	ko00000,ko02048,ko03036,ko04812	1.A.33.1,9.B.157.1	-	-	MreB_Mbl
BYD3_k127_8380491_5	880070.Cycma_4835	1.269e-40	157.0	COG1595@1|root,COG1595@2|Bacteria,4NV8H@976|Bacteroidetes,47XM9@768503|Cytophagia	976|Bacteroidetes	K	ECF sigma factor	-	-	-	ko:K03088	-	-	-	-	ko00000,ko03021	-	-	-	Sigma70_r2,Sigma70_r4_2
BYD3_k127_8380491_4	880070.Cycma_4834	6.916e-60	220.0	COG3712@1|root,COG3712@2|Bacteria,4NJBJ@976|Bacteroidetes,47RQM@768503|Cytophagia	976|Bacteroidetes	PT	Domain of unknown function (DUF4974)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4974,FecR
BYD3_k127_8380491_0	203275.BFO_1399	0.0	1282.0	COG1629@1|root,COG1629@2|Bacteria,COG4771@2|Bacteria,4NDXS@976|Bacteroidetes,2FKYX@200643|Bacteroidia,2322X@171551|Porphyromonadaceae	976|Bacteroidetes	P	TonB-linked outer membrane protein, SusC RagA family	-	-	-	-	-	-	-	-	-	-	-	-	CarbopepD_reg_2,Plug,STN,TonB_dep_Rec
BYD3_k127_8380491_6	997884.HMPREF1068_02052	3.297e-21	96.0	COG3637@1|root,COG3637@2|Bacteria,4NIPZ@976|Bacteroidetes,2FQ2F@200643|Bacteroidia,4ANBF@815|Bacteroidaceae	976|Bacteroidetes	M	COG NOG32048 non supervised orthologous group	-	-	-	ko:K21572	-	-	-	-	ko00000,ko02000	8.A.46.1,8.A.46.3	-	-	SusD-like_3,SusD_RagB
BYD3_k127_8380491_1	742726.HMPREF9448_00871	1.33e-182	578.0	COG3637@1|root,COG3637@2|Bacteria,4NIPZ@976|Bacteroidetes,2FQ2F@200643|Bacteroidia,22XD1@171551|Porphyromonadaceae	976|Bacteroidetes	M	SusD family	-	-	-	ko:K21572	-	-	-	-	ko00000,ko02000	8.A.46.1,8.A.46.3	-	-	SusD-like_3,SusD_RagB
BYD3_k127_8380491_2	742726.HMPREF9448_00870	1.501e-158	513.0	2DBEW@1|root,2Z8UY@2|Bacteria,4NH98@976|Bacteroidetes,2FPNP@200643|Bacteroidia,22YKH@171551|Porphyromonadaceae	976|Bacteroidetes	S	Domain of unknown function (DUF4832)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4832,DUF4874
BYD3_k127_8380491_3	742726.HMPREF9448_00869	2.141e-73	254.0	2EX1H@1|root,33QCM@2|Bacteria,4NZT6@976|Bacteroidetes,2FM6B@200643|Bacteroidia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_8445192_2	1408473.JHXO01000007_gene909	2.535e-148	479.0	COG5026@1|root,COG5026@2|Bacteria,4NIN0@976|Bacteroidetes,2FQ47@200643|Bacteroidia	976|Bacteroidetes	G	Hexokinase	-	-	2.7.1.1	ko:K00844	ko00010,ko00051,ko00052,ko00500,ko00520,ko00521,ko00524,ko01100,ko01110,ko01120,ko01130,ko01200,ko04066,ko04910,ko04930,ko04973,ko05230,map00010,map00051,map00052,map00500,map00520,map00521,map00524,map01100,map01110,map01120,map01130,map01200,map04066,map04910,map04930,map04973,map05230	M00001,M00549	R00299,R00760,R00867,R01326,R01600,R01786,R01961,R03920	RC00002,RC00017	ko00000,ko00001,ko00002,ko01000,ko04131	-	-	-	Hexokinase_1,Hexokinase_2
BYD3_k127_8445192_3	929562.Emtol_0722	6.073e-123	401.0	COG1082@1|root,COG1082@2|Bacteria,4NJ3Z@976|Bacteroidetes,47NJ6@768503|Cytophagia	976|Bacteroidetes	G	Xylose isomerase domain protein TIM barrel	-	-	-	-	-	-	-	-	-	-	-	-	AP_endonuc_2,TAT_signal
BYD3_k127_8445192_1	411154.GFO_0031	0.0	1032.0	COG3250@1|root,COG3250@2|Bacteria,4NEWN@976|Bacteroidetes,1HXYF@117743|Flavobacteriia	976|Bacteroidetes	G	Belongs to the glycosyl hydrolase 2 family	-	-	3.2.1.23	ko:K01190	ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100	-	R01105,R01678,R03355,R04783,R06114	RC00049,RC00452	ko00000,ko00001,ko01000	-	-	-	DUF4982,Glyco_hydro_2,Glyco_hydro_2_C,Glyco_hydro_2_N
BYD3_k127_8445192_7	641524.ADICYQ_1892	1.13e-65	226.0	COG2764@1|root,COG2764@2|Bacteria,4NQD7@976|Bacteroidetes,47XP2@768503|Cytophagia	976|Bacteroidetes	S	3-demethylubiquinone-9 3-methyltransferase	-	-	-	ko:K04750	-	-	-	-	ko00000	-	-	-	3-dmu-9_3-mt
BYD3_k127_8445192_5	1279009.ADICEAN_00044	4.264e-105	349.0	COG3832@1|root,COG3832@2|Bacteria,4NQ4A@976|Bacteroidetes,47QHI@768503|Cytophagia	976|Bacteroidetes	S	Activator of Hsp90 ATPase homolog 1-like protein	-	-	-	-	-	-	-	-	-	-	-	-	AHSA1
BYD3_k127_8445192_4	700598.Niako_4034	2.311e-111	374.0	COG1538@1|root,COG1538@2|Bacteria,4NF4X@976|Bacteroidetes,1IPMH@117747|Sphingobacteriia	976|Bacteroidetes	MU	outer membrane efflux protein	-	-	-	-	-	-	-	-	-	-	-	-	OEP
BYD3_k127_8445192_6	714943.Mucpa_6198	1.092e-96	329.0	COG0845@1|root,COG0845@2|Bacteria,4NIDC@976|Bacteroidetes,1INTJ@117747|Sphingobacteriia	976|Bacteroidetes	M	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family	-	-	-	ko:K03585	ko01501,ko01503,map01501,map01503	M00646,M00647,M00699,M00718	-	-	ko00000,ko00001,ko00002,ko01504,ko02000,ko03036	2.A.6.2,8.A.1.6	-	-	HlyD_D23
BYD3_k127_8445192_0	1123248.KB893321_gene558	0.0	1248.0	COG0841@1|root,COG0841@2|Bacteria,4NDZG@976|Bacteroidetes,1IPE6@117747|Sphingobacteriia	976|Bacteroidetes	V	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family	-	-	-	ko:K03296	-	-	-	-	ko00000	2.A.6.2	-	-	ACR_tran
BYD3_k127_8447037_1	1408473.JHXO01000005_gene1443	1.228e-242	765.0	COG0488@1|root,COG0488@2|Bacteria,4NG1W@976|Bacteroidetes,2FMY5@200643|Bacteroidia	976|Bacteroidetes	S	ABC transporter, ATP-binding protein	yheS_3	-	-	ko:K06158	-	-	-	-	ko00000,ko03012	-	-	-	ABC_tran,ABC_tran_CTD,ABC_tran_Xtn
BYD3_k127_8447037_7	755732.Fluta_1203	4.802e-61	225.0	COG2385@1|root,COG2385@2|Bacteria,4NG21@976|Bacteroidetes,1I7GW@117743|Flavobacteriia,2PAW4@246874|Cryomorphaceae	976|Bacteroidetes	D	Stage II sporulation protein	lytB	-	-	ko:K06381	-	-	-	-	ko00000	-	-	-	DUF4922,Glycos_transf_2,SpoIID
BYD3_k127_8447037_3	762903.Pedsa_0278	9.659e-110	365.0	COG0763@1|root,COG0763@2|Bacteria,4NDW3@976|Bacteroidetes,1IPZM@117747|Sphingobacteriia	976|Bacteroidetes	M	Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell	lpxB	-	2.4.1.182	ko:K00748	ko00540,ko01100,map00540,map01100	M00060	R04606	RC00005,RC00059	ko00000,ko00001,ko00002,ko01000,ko01003,ko01005	-	GT19	-	LpxB
BYD3_k127_8447037_4	1408473.JHXO01000011_gene3060	1.92e-88	299.0	COG0496@1|root,COG0496@2|Bacteria,4NEJ5@976|Bacteroidetes,2FMRR@200643|Bacteroidia	976|Bacteroidetes	S	Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates	surE	-	3.1.3.5	ko:K03787	ko00230,ko00240,ko00760,ko01100,ko01110,map00230,map00240,map00760,map01100,map01110	-	R00183,R00511,R00963,R01126,R01227,R01569,R01664,R01968,R02088,R02102,R02323,R02719,R03346	RC00017	ko00000,ko00001,ko01000	-	-	-	SurE
BYD3_k127_8447037_5	1122931.AUAE01000009_gene4709	6.828e-72	258.0	292UM@1|root,2ZQC9@2|Bacteria,4NTGF@976|Bacteroidetes,2FMY7@200643|Bacteroidia,22WZB@171551|Porphyromonadaceae	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_8447037_2	927658.AJUM01000034_gene545	2.928e-131	430.0	COG2223@1|root,COG2223@2|Bacteria,4NHX9@976|Bacteroidetes,2FZ04@200643|Bacteroidia,3XKD8@558415|Marinilabiliaceae	976|Bacteroidetes	P	Major Facilitator Superfamily	-	-	-	ko:K08177	-	-	-	-	ko00000,ko02000	2.A.1.11	-	-	MFS_1
BYD3_k127_8447037_0	694427.Palpr_1212	2.855e-296	929.0	COG0072@1|root,COG0073@1|root,COG0072@2|Bacteria,COG0073@2|Bacteria,4NF5B@976|Bacteroidetes,2FNBF@200643|Bacteroidia,22WG1@171551|Porphyromonadaceae	976|Bacteroidetes	J	Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily	pheT	GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006432,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009328,GO:0009987,GO:0010467,GO:0016070,GO:0019538,GO:0019752,GO:0032991,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:1901360,GO:1901564,GO:1901566,GO:1901576,GO:1902494	6.1.1.20	ko:K01890	ko00970,map00970	M00359,M00360	R03660	RC00055,RC00523	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	-	-	-	B3_4,B5,FDX-ACB,tRNA_bind
BYD3_k127_8447037_6	1168034.FH5T_13475	1.267e-66	231.0	COG2110@1|root,COG2110@2|Bacteria,4NNRH@976|Bacteroidetes,2FMVR@200643|Bacteroidia	976|Bacteroidetes	S	Appr-1'-p processing enzyme	-	-	-	-	-	-	-	-	-	-	-	-	Macro
BYD3_k127_8447037_8	1121403.AUCV01000007_gene1198	4.966e-60	211.0	COG1803@1|root,COG1803@2|Bacteria,1RD3D@1224|Proteobacteria,42SPC@68525|delta/epsilon subdivisions,2WP55@28221|Deltaproteobacteria	28221|Deltaproteobacteria	G	TIGRFAM Methylglyoxal synthase	mgsA	-	4.2.3.3	ko:K01734	ko00640,ko01120,map00640,map01120	-	R01016	RC00424	ko00000,ko00001,ko01000	-	-	-	MGS
BYD3_k127_8447037_9	1122978.AUFP01000007_gene1532	1.871e-40	152.0	COG0436@1|root,COG0436@2|Bacteria,4NENS@976|Bacteroidetes,2FMU2@200643|Bacteroidia	976|Bacteroidetes	E	Aminotransferase	aspC	-	2.6.1.1	ko:K00812	ko00220,ko00250,ko00270,ko00330,ko00350,ko00360,ko00400,ko00401,ko00950,ko00960,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map00250,map00270,map00330,map00350,map00360,map00400,map00401,map00950,map00960,map01100,map01110,map01130,map01210,map01230	-	R00355,R00694,R00734,R00896,R02433,R02619,R05052	RC00006	ko00000,ko00001,ko01000,ko01007	-	-	-	Aminotran_1_2
BYD3_k127_8451803_3	1168289.AJKI01000044_gene83	1.937e-178	565.0	COG0449@1|root,COG0449@2|Bacteria,4NE8Q@976|Bacteroidetes,2FN9H@200643|Bacteroidia,3XJ1H@558415|Marinilabiliaceae	976|Bacteroidetes	M	SIS domain	glmS	GO:0003674,GO:0003824,GO:0004360,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006002,GO:0006040,GO:0006047,GO:0006139,GO:0006464,GO:0006486,GO:0006487,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008483,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009225,GO:0009987,GO:0016740,GO:0016769,GO:0019538,GO:0019637,GO:0034641,GO:0034645,GO:0036211,GO:0043170,GO:0043412,GO:0043413,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0055086,GO:0070085,GO:0070548,GO:0071704,GO:1901135,GO:1901137,GO:1901360,GO:1901564,GO:1901566,GO:1901576	2.6.1.16	ko:K00820	ko00250,ko00520,ko01100,ko01130,ko04931,map00250,map00520,map01100,map01130,map04931	-	R00768	RC00010,RC00163,RC02752	ko00000,ko00001,ko01000,ko01002	-	-	-	GATase_6,SIS
BYD3_k127_8451803_4	742817.HMPREF9449_02071	1.321e-109	360.0	COG0297@1|root,COG0297@2|Bacteria,4NFP8@976|Bacteroidetes,2FN7D@200643|Bacteroidia,22X24@171551|Porphyromonadaceae	976|Bacteroidetes	G	synthase	glgA	-	2.4.1.21	ko:K00703	ko00500,ko01100,ko01110,ko02026,map00500,map01100,map01110,map02026	M00565	R02421	RC00005	ko00000,ko00001,ko00002,ko01000,ko01003	-	GT5	-	Glyco_transf_5
BYD3_k127_8451803_7	439235.Dalk_2911	4.745e-57	205.0	COG1878@1|root,COG1878@2|Bacteria,1MWWB@1224|Proteobacteria,43E9D@68525|delta/epsilon subdivisions,2X9YK@28221|Deltaproteobacteria,2MMA2@213118|Desulfobacterales	28221|Deltaproteobacteria	S	Putative cyclase	-	-	-	-	-	-	-	-	-	-	-	-	Cyclase
BYD3_k127_8451803_10	880071.Fleli_1905	2.654e-18	89.0	2AD7J@1|root,312WH@2|Bacteria,4NR1A@976|Bacteroidetes,47RHF@768503|Cytophagia	976|Bacteroidetes	S	Domain of unknown function (DUF1987)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1987
BYD3_k127_8451803_6	468059.AUHA01000002_gene469	8.76e-89	306.0	COG0010@1|root,COG0010@2|Bacteria,4NE5W@976|Bacteroidetes,1IQD9@117747|Sphingobacteriia	976|Bacteroidetes	E	Belongs to the arginase family	-	-	3.5.3.8	ko:K01479	ko00340,ko01100,map00340,map01100	M00045	R02285	RC00221,RC00681	ko00000,ko00001,ko00002,ko01000	-	-	-	Arginase
BYD3_k127_8451803_0	385682.AFSL01000014_gene2730	7.019e-312	972.0	COG0550@1|root,COG0550@2|Bacteria,4NF9S@976|Bacteroidetes,2FMSF@200643|Bacteroidia,3XINJ@558415|Marinilabiliaceae	976|Bacteroidetes	L	Bacterial DNA topoisomeraes I ATP-binding domain	topA	-	5.99.1.2	ko:K03168	-	-	-	-	ko00000,ko01000,ko03032,ko03400	-	-	-	Topoisom_bac,Toprim,Toprim_C_rpt
BYD3_k127_8451803_1	1121129.KB903360_gene3385	1.513e-257	816.0	COG5009@1|root,COG5009@2|Bacteria,4NECJ@976|Bacteroidetes,2FNAU@200643|Bacteroidia,22W8Z@171551|Porphyromonadaceae	976|Bacteroidetes	M	Penicillin-binding Protein	mrcA	-	2.4.1.129,3.4.16.4	ko:K05366	ko00550,ko01100,ko01501,map00550,map01100,map01501	-	-	-	ko00000,ko00001,ko01000,ko01003,ko01011	-	GT51	-	Transgly,Transpeptidase
BYD3_k127_8451803_2	742767.HMPREF9456_02081	4.72e-188	597.0	COG1066@1|root,COG1066@2|Bacteria,4NEYA@976|Bacteroidetes,2FMRM@200643|Bacteroidia,22VX3@171551|Porphyromonadaceae	976|Bacteroidetes	O	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function	radA	-	-	ko:K04485	-	-	-	-	ko00000,ko03400	-	-	-	AAA_25,ATPase,ChlI
BYD3_k127_8451803_9	1121129.KB903360_gene3405	1.168e-54	197.0	COG0615@1|root,COG0615@2|Bacteria,4NNKK@976|Bacteroidetes,2FU16@200643|Bacteroidia	976|Bacteroidetes	IM	Cytidylyltransferase-like	-	-	2.7.1.167,2.7.7.70	ko:K03272	ko00540,ko01100,map00540,map01100	M00064	R05644,R05646	RC00002,RC00078	ko00000,ko00001,ko00002,ko01000,ko01005	-	-	-	CTP_transf_like
BYD3_k127_8451803_8	1120968.AUBX01000015_gene3567	6.367e-55	194.0	COG0853@1|root,COG0853@2|Bacteria,4NQ42@976|Bacteroidetes,47QA8@768503|Cytophagia	976|Bacteroidetes	H	Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine	panD	-	4.1.1.11	ko:K01579	ko00410,ko00770,ko01100,ko01110,map00410,map00770,map01100,map01110	M00119	R00489	RC00299	ko00000,ko00001,ko00002,ko01000	-	-	-	Asp_decarbox
BYD3_k127_8451803_5	1121129.KB903360_gene3403	2.886e-100	334.0	COG0414@1|root,COG0414@2|Bacteria,4NFT9@976|Bacteroidetes,2FN90@200643|Bacteroidia,22X8F@171551|Porphyromonadaceae	976|Bacteroidetes	H	Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate	panC	GO:0003674,GO:0003824,GO:0004592,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006573,GO:0006575,GO:0006732,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009081,GO:0009108,GO:0009110,GO:0009987,GO:0015939,GO:0015940,GO:0016053,GO:0016874,GO:0016879,GO:0016881,GO:0019752,GO:0032787,GO:0033317,GO:0034641,GO:0042364,GO:0042398,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0051186,GO:0051188,GO:0071704,GO:0072330,GO:1901564,GO:1901566,GO:1901576,GO:1901605	6.3.2.1	ko:K01918	ko00410,ko00770,ko01100,ko01110,map00410,map00770,map01100,map01110	M00119	R02473	RC00096,RC00141	ko00000,ko00001,ko00002,ko01000	-	-	-	Pantoate_ligase
BYD3_k127_8455288_4	714943.Mucpa_1180	1.159e-24	106.0	COG0621@1|root,COG0621@2|Bacteria,4NEJK@976|Bacteroidetes,1IP0Q@117747|Sphingobacteriia	976|Bacteroidetes	J	Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12	rimO	-	2.8.4.4	ko:K14441	-	-	R10652	RC00003,RC03217	ko00000,ko01000,ko03009	-	-	-	Radical_SAM,TRAM,UPF0004
BYD3_k127_8455288_0	1408473.JHXO01000007_gene858	0.0	1192.0	COG0542@1|root,COG0542@2|Bacteria,4NE1J@976|Bacteroidetes,2FNNW@200643|Bacteroidia	976|Bacteroidetes	O	ATPase family associated with various cellular activities (AAA)	clpC	-	-	ko:K03696	ko01100,map01100	-	-	-	ko00000,ko03110	-	-	-	AAA,AAA_2,ClpB_D2-small,Clp_N,UVR
BYD3_k127_8455288_1	1408473.JHXO01000007_gene857	0.0	1182.0	COG0188@1|root,COG0188@2|Bacteria,4NDWQ@976|Bacteroidetes,2FMCP@200643|Bacteroidia	976|Bacteroidetes	L	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner	gyrA	-	5.99.1.3	ko:K02469	-	-	-	-	ko00000,ko01000,ko03032,ko03400	-	-	-	DNA_gyraseA_C,DNA_topoisoIV
BYD3_k127_8455288_3	1408473.JHXO01000007_gene856	1.805e-47	187.0	COG4783@1|root,COG4783@2|Bacteria,4P1TE@976|Bacteroidetes,2G0E9@200643|Bacteroidia	976|Bacteroidetes	S	Tetratricopeptide repeat	-	-	-	-	-	-	-	-	-	-	-	-	TPR_1,TPR_8
BYD3_k127_8455288_2	525257.HMPREF0204_13845	1.248e-63	222.0	298NJ@1|root,2ZVT4@2|Bacteria,4NM57@976|Bacteroidetes,1I7UW@117743|Flavobacteriia,3ZPX7@59732|Chryseobacterium	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_8460363_1	700598.Niako_4569	1.505e-96	325.0	COG2890@1|root,COG2890@2|Bacteria,4NDZB@976|Bacteroidetes,1IRSV@117747|Sphingobacteriia	976|Bacteroidetes	J	Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif	prmC	GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0008152,GO:0008168,GO:0008757,GO:0016740,GO:0016741,GO:0032259,GO:0044424,GO:0044444,GO:0044464	2.1.1.297	ko:K02493	-	-	R10806	RC00003,RC03279	ko00000,ko01000,ko03012	-	-	-	MTS
BYD3_k127_8460363_0	700598.Niako_4568	2.926e-133	435.0	COG0117@1|root,COG1985@1|root,COG0117@2|Bacteria,COG1985@2|Bacteria,4NFJE@976|Bacteroidetes,1IP03@117747|Sphingobacteriia	976|Bacteroidetes	H	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate	ribD	-	1.1.1.193,3.5.4.26	ko:K11752	ko00740,ko01100,ko01110,ko02024,map00740,map01100,map01110,map02024	M00125	R03458,R03459	RC00204,RC00933	ko00000,ko00001,ko00002,ko01000	-	-	-	RibD_C,dCMP_cyt_deam_1
BYD3_k127_8460363_2	925409.KI911562_gene1674	2.796e-30	121.0	COG1739@1|root,COG1739@2|Bacteria,4NF0D@976|Bacteroidetes,1IQV2@117747|Sphingobacteriia	976|Bacteroidetes	S	PFAM Uncharacterised protein family UPF0029, Impact, N-terminal	yigZ	-	-	-	-	-	-	-	-	-	-	-	UPF0029
BYD3_k127_8463765_1	1237149.C900_02757	8.837e-117	399.0	COG2199@1|root,COG2203@1|root,COG3292@1|root,COG2203@2|Bacteria,COG3292@2|Bacteria,COG3706@2|Bacteria,4NK8Q@976|Bacteroidetes,47KVN@768503|Cytophagia	976|Bacteroidetes	T	Two component regulator propeller	-	-	-	-	-	-	-	-	-	-	-	-	GAF_2,HATPase_c,HisKA_3,His_kinase,Reg_prop,Y_Y_Y
BYD3_k127_8463765_0	1499967.BAYZ01000009_gene5389	2.545e-152	492.0	COG0407@1|root,COG0407@2|Bacteria	2|Bacteria	H	Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III	-	-	-	-	-	-	-	-	-	-	-	-	URO-D
BYD3_k127_8463765_2	1121904.ARBP01000026_gene692	5.612e-110	361.0	COG1028@1|root,COG1028@2|Bacteria,4NJKA@976|Bacteroidetes,47KN3@768503|Cytophagia	976|Bacteroidetes	IQ	Short-chain dehydrogenase reductase SDR	-	-	-	-	-	-	-	-	-	-	-	-	adh_short_C2
BYD3_k127_8463765_3	1185876.BN8_00275	2.788e-88	298.0	COG1940@1|root,COG1940@2|Bacteria,4NH8S@976|Bacteroidetes,47J9G@768503|Cytophagia	976|Bacteroidetes	GK	ROK family	-	-	2.7.1.2	ko:K00845	ko00010,ko00052,ko00500,ko00520,ko00521,ko00524,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00052,map00500,map00520,map00521,map00524,map01100,map01110,map01120,map01130,map01200	M00001,M00549	R00299,R01600,R01786	RC00002,RC00017	ko00000,ko00001,ko00002,ko01000	-	-	-	ROK
BYD3_k127_847587_1	153721.MYP_2118	1.044e-36	154.0	COG2982@1|root,COG2982@2|Bacteria,4NHD3@976|Bacteroidetes,47KTA@768503|Cytophagia	976|Bacteroidetes	M	AsmA-like C-terminal region	-	-	-	-	-	-	-	-	-	-	-	-	AsmA,AsmA_2,DUF3971
BYD3_k127_847587_0	694427.Palpr_0291	2.571e-110	368.0	COG4191@1|root,COG4191@2|Bacteria,4NEMP@976|Bacteroidetes,2FPJR@200643|Bacteroidia,22VVD@171551|Porphyromonadaceae	976|Bacteroidetes	T	Histidine kinase	vicK	-	-	-	-	-	-	-	-	-	-	-	HATPase_c
BYD3_k127_847587_2	1122973.KB904204_gene1776	4.712e-15	79.0	COG0594@1|root,COG0594@2|Bacteria	2|Bacteria	J	ribonuclease P activity	rnpA	GO:0000966,GO:0001682,GO:0003674,GO:0003676,GO:0003723,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004526,GO:0004540,GO:0004549,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005655,GO:0005730,GO:0006139,GO:0006396,GO:0006399,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0030677,GO:0030681,GO:0031123,GO:0031404,GO:0031974,GO:0031981,GO:0032991,GO:0033204,GO:0034414,GO:0034470,GO:0034471,GO:0034641,GO:0034660,GO:0040007,GO:0042301,GO:0042779,GO:0042780,GO:0042781,GO:0043167,GO:0043168,GO:0043170,GO:0043199,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043628,GO:0044237,GO:0044238,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044452,GO:0044464,GO:0046483,GO:0070013,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0097159,GO:0099116,GO:0140098,GO:0140101,GO:1901360,GO:1901363,GO:1901681,GO:1902494,GO:1902555,GO:1905267,GO:1905348,GO:1990904	3.1.26.5	ko:K03536,ko:K08998	-	-	-	-	ko00000,ko01000,ko03016	-	-	-	Ribonuclease_P
BYD3_k127_8487812_8	1168034.FH5T_20325	1.285e-31	125.0	COG0335@1|root,COG0335@2|Bacteria,4NNPW@976|Bacteroidetes,2FSHU@200643|Bacteroidia	976|Bacteroidetes	J	This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site	rplS	GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904	-	ko:K02884	ko03010,map03010	M00178	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_L19
BYD3_k127_8487812_1	869213.JCM21142_3934	2.91e-179	594.0	COG2982@1|root,COG2982@2|Bacteria,4NEJQ@976|Bacteroidetes,47KBD@768503|Cytophagia	976|Bacteroidetes	M	AsmA-like C-terminal region	-	-	-	ko:K07289	-	-	-	-	ko00000	-	-	-	AsmA,AsmA_2
BYD3_k127_8487812_4	504472.Slin_6585	7.404e-98	327.0	COG1940@1|root,COG1940@2|Bacteria,4NJ71@976|Bacteroidetes,47MF1@768503|Cytophagia	976|Bacteroidetes	GK	PFAM ROK family	-	-	2.7.1.2	ko:K00845	ko00010,ko00052,ko00500,ko00520,ko00521,ko00524,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00052,map00500,map00520,map00521,map00524,map01100,map01110,map01120,map01130,map01200	M00001,M00549	R00299,R01600,R01786	RC00002,RC00017	ko00000,ko00001,ko00002,ko01000	-	-	-	ROK
BYD3_k127_8487812_0	1268240.ATFI01000006_gene903	3.36e-299	941.0	COG3250@1|root,COG3250@2|Bacteria,4NE7H@976|Bacteroidetes,2FNT8@200643|Bacteroidia,4ANGN@815|Bacteroidaceae	976|Bacteroidetes	G	Belongs to the glycosyl hydrolase 2 family	-	-	3.2.1.165	ko:K15855	ko00520,ko01100,map00520,map01100	-	R01966	RC00049	ko00000,ko00001,ko01000	-	-	-	Glyco_hydro_2,Glyco_hydro_2_C,Glyco_hydro_2_N
BYD3_k127_8487812_7	1121481.AUAS01000008_gene3004	1.501e-56	203.0	COG0738@1|root,COG0738@2|Bacteria,4NEB2@976|Bacteroidetes,47KY1@768503|Cytophagia	976|Bacteroidetes	G	PFAM Major Facilitator Superfamily	-	-	-	-	-	-	-	-	-	-	-	-	MFS_1
BYD3_k127_8487812_5	1288963.ADIS_1082	5.319e-97	323.0	COG0738@1|root,COG0738@2|Bacteria,4NEB2@976|Bacteroidetes,47KY1@768503|Cytophagia	976|Bacteroidetes	G	PFAM Major Facilitator Superfamily	-	-	-	-	-	-	-	-	-	-	-	-	MFS_1
BYD3_k127_8487812_2	1211813.CAPH01000013_gene416	6.852e-171	544.0	COG0482@1|root,COG0482@2|Bacteria,4NFXZ@976|Bacteroidetes,2FPBU@200643|Bacteroidia,22UUK@171550|Rikenellaceae	976|Bacteroidetes	J	Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34	mnmA	-	2.8.1.13	ko:K00566	ko04122,map04122	-	R08700	RC02313,RC02315	ko00000,ko00001,ko01000,ko03016	-	-	-	tRNA_Me_trans
BYD3_k127_8487812_3	56780.SYN_02393	1.166e-161	515.0	COG2957@1|root,COG2957@2|Bacteria,1MX65@1224|Proteobacteria,42NAS@68525|delta/epsilon subdivisions,2WNAF@28221|Deltaproteobacteria	28221|Deltaproteobacteria	E	Belongs to the agmatine deiminase family	aguA	-	3.5.3.12	ko:K10536	ko00330,ko01100,map00330,map01100	-	R01416	RC00177	ko00000,ko00001,ko01000	-	-	-	PAD_porph
BYD3_k127_8487812_6	1229487.AMYW01000017_gene770	4.698e-57	202.0	COG0388@1|root,COG0388@2|Bacteria,4NEME@976|Bacteroidetes,1HY7N@117743|Flavobacteriia,2NV1S@237|Flavobacterium	976|Bacteroidetes	S	Carbon-nitrogen hydrolase	pabB	-	3.5.1.53	ko:K12251	ko00330,ko01100,map00330,map01100	-	R01152	RC00096	ko00000,ko00001,ko01000	-	-	-	CN_hydrolase
BYD3_k127_8536775_5	1121957.ATVL01000008_gene4124	2.658e-155	501.0	COG0738@1|root,COG0738@2|Bacteria,4NEYR@976|Bacteroidetes,47K89@768503|Cytophagia	976|Bacteroidetes	G	TIGRFAM glucose galactose transporter	gluP	-	-	ko:K02429	-	-	-	-	ko00000,ko02000	2.A.1.7	-	-	MFS_1
BYD3_k127_8536775_4	927658.AJUM01000022_gene1111	9.615e-163	529.0	COG3291@1|root,COG3291@2|Bacteria,4PKMJ@976|Bacteroidetes,2G0FM@200643|Bacteroidia	976|Bacteroidetes	G	Cellulase N-terminal ig-like domain	-	GO:0000272,GO:0003674,GO:0003824,GO:0004553,GO:0005975,GO:0005976,GO:0006073,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009251,GO:0009987,GO:0010383,GO:0010410,GO:0010411,GO:0016052,GO:0016787,GO:0016798,GO:0033946,GO:0043170,GO:0044036,GO:0044042,GO:0044237,GO:0044238,GO:0044260,GO:0044262,GO:0044264,GO:0044403,GO:0044419,GO:0051704,GO:0052736,GO:0071554,GO:0071704,GO:0085030,GO:1901575,GO:2000895,GO:2000899	3.2.1.4	ko:K01179	ko00500,ko01100,map00500,map01100	-	R06200,R11307,R11308	-	ko00000,ko00001,ko01000	-	GH5,GH9	-	CelD_N,Glyco_hydro_9
BYD3_k127_8536775_0	1168289.AJKI01000031_gene1083	0.0	1174.0	COG3459@1|root,COG3459@2|Bacteria,4NIVN@976|Bacteroidetes,2FQ10@200643|Bacteroidia,3XJF8@558415|Marinilabiliaceae	976|Bacteroidetes	G	Putative carbohydrate binding domain	cepA	-	2.4.1.20	ko:K00702	ko00500,ko01100,map00500,map01100	-	R00952	RC00049	ko00000,ko00001,ko01000	-	GT36	-	Glyco_hydro_36,Glyco_transf_36
BYD3_k127_8536775_2	1134474.O59_000847	1.535e-229	726.0	COG0591@1|root,COG0591@2|Bacteria,1PNHU@1224|Proteobacteria,1S0S6@1236|Gammaproteobacteria,1FGWH@10|Cellvibrio	1236|Gammaproteobacteria	E	Sodium:solute symporter family	-	-	-	-	-	-	-	-	-	-	-	-	SSF
BYD3_k127_8536775_7	1168289.AJKI01000031_gene1085	1.424e-79	272.0	COG1051@1|root,COG1051@2|Bacteria,4NIBP@976|Bacteroidetes,2FNT4@200643|Bacteroidia,3XJ7M@558415|Marinilabiliaceae	976|Bacteroidetes	F	Hydrolase, NUDIX family	-	-	3.6.1.55	ko:K03574	-	-	-	-	ko00000,ko01000,ko03400	-	-	-	NUDIX
BYD3_k127_8536775_3	1122931.AUAE01000012_gene2321	1.913e-217	712.0	COG1074@1|root,COG1074@2|Bacteria,4NEX4@976|Bacteroidetes,2FMHG@200643|Bacteroidia,22W5V@171551|Porphyromonadaceae	976|Bacteroidetes	L	Belongs to the helicase family. UvrD subfamily	addA	-	-	-	-	-	-	-	-	-	-	-	Cas_Cas4,PDDEXK_1,UvrD-helicase,UvrD_C
BYD3_k127_8536775_6	583355.Caka_2529	2.606e-100	337.0	COG1242@1|root,COG1242@2|Bacteria,46VEX@74201|Verrucomicrobia	74201|Verrucomicrobia	S	Radical_SAM C-terminal domain	-	-	-	ko:K07139	-	-	-	-	ko00000	-	-	-	Radical_SAM,Radical_SAM_C
BYD3_k127_8536775_9	1358423.N180_07085	8.362e-43	164.0	COG1595@1|root,COG1595@2|Bacteria,4NNEM@976|Bacteroidetes,1IRWR@117747|Sphingobacteriia	976|Bacteroidetes	K	Belongs to the sigma-70 factor family. ECF subfamily	-	-	-	ko:K03088	-	-	-	-	ko00000,ko03021	-	-	-	Sigma70_r2,Sigma70_r4_2
BYD3_k127_8536775_10	926549.KI421517_gene379	3.758e-25	117.0	COG0810@1|root,COG0810@2|Bacteria,4NFH6@976|Bacteroidetes,47XHA@768503|Cytophagia	976|Bacteroidetes	M	Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins	-	-	-	ko:K03832	-	-	-	-	ko00000,ko02000	2.C.1.1	-	-	TonB_C
BYD3_k127_8536775_1	760192.Halhy_1056	1.435e-234	740.0	COG0726@1|root,COG0726@2|Bacteria,4NFJP@976|Bacteroidetes,1IQSF@117747|Sphingobacteriia	976|Bacteroidetes	G	polysaccharide deacetylase	-	-	3.2.1.4	ko:K01179	ko00500,ko01100,map00500,map01100	-	R06200,R11307,R11308	-	ko00000,ko00001,ko01000	-	GH5,GH9	-	CelD_N,Glyco_hydro_9,Polysacc_deac_1
BYD3_k127_8536775_8	269798.CHU_1303	2.429e-60	216.0	COG1225@1|root,COG1225@2|Bacteria,4NXEC@976|Bacteroidetes	976|Bacteroidetes	O	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_8614713_3	880073.Calab_2784	1.082e-50	183.0	COG1164@1|root,COG1164@2|Bacteria,2NQ8K@2323|unclassified Bacteria	2|Bacteria	E	Oligoendopeptidase f	-	-	3.4.15.1	ko:K01283	ko04614,ko04924,ko05142,ko05410,map04614,map04924,map05142,map05410	-	-	-	ko00000,ko00001,ko01000,ko01002,ko04090,ko04147	-	-	-	Peptidase_M2,Peptidase_M3
BYD3_k127_8614713_0	1408473.JHXO01000012_gene356	8.033e-138	447.0	COG4299@1|root,COG4299@2|Bacteria,4NGKU@976|Bacteroidetes,2FQUY@200643|Bacteroidia	976|Bacteroidetes	S	Domain of unknown function (DUF5009)	-	-	-	-	-	-	-	-	-	-	-	-	DUF5009
BYD3_k127_8614713_2	1408473.JHXO01000012_gene421	1.391e-70	246.0	COG2133@1|root,COG2133@2|Bacteria,4PMXZ@976|Bacteroidetes,2G0K9@200643|Bacteroidia	976|Bacteroidetes	G	Domain of Unknown Function (DUF1080)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1080
BYD3_k127_8614713_1	929562.Emtol_2418	1.21e-127	416.0	COG1052@1|root,COG1052@2|Bacteria,4NF1R@976|Bacteroidetes,47KBU@768503|Cytophagia	976|Bacteroidetes	CH	D-isomer specific 2-hydroxyacid dehydrogenase	ldhA	-	1.1.1.28	ko:K03778	ko00620,ko01120,map00620,map01120	-	R00704	RC00044	ko00000,ko00001,ko01000	-	-	-	2-Hacid_dh,2-Hacid_dh_C
BYD3_k127_8614713_4	1232410.KI421417_gene2707	2.274e-49	182.0	COG2032@1|root,COG2032@2|Bacteria,1N26J@1224|Proteobacteria,43B8H@68525|delta/epsilon subdivisions,2X6MV@28221|Deltaproteobacteria	28221|Deltaproteobacteria	P	Destroys radicals which are normally produced within the cells and which are toxic to biological systems	-	-	1.15.1.1	ko:K04565	ko04146,ko04213,ko05014,ko05016,ko05020,map04146,map04213,map05014,map05016,map05020	-	-	-	ko00000,ko00001,ko01000	-	-	-	Sod_Cu
BYD3_k127_8614713_5	927658.AJUM01000037_gene2168	5.9e-24	104.0	COG2154@1|root,COG2154@2|Bacteria,4NS9U@976|Bacteroidetes	976|Bacteroidetes	H	PFAM Pterin 4 alpha carbinolamine dehydratase	phhB	-	4.2.1.96	ko:K01724	ko00790,map00790	-	R04734	RC01208	ko00000,ko00001,ko01000,ko04147	-	-	-	Pterin_4a
BYD3_k127_8614713_6	1168289.AJKI01000002_gene2514	1.108e-18	86.0	COG1141@1|root,COG1141@2|Bacteria,4P7D9@976|Bacteroidetes,2FZ83@200643|Bacteroidia	976|Bacteroidetes	C	4Fe-4S single cluster domain of Ferredoxin I	-	-	-	-	-	-	-	-	-	-	-	-	Fer4_13
BYD3_k127_8640501_0	880071.Fleli_1556	1.588e-41	166.0	COG3291@1|root,COG3391@1|root,COG3291@2|Bacteria,COG3391@2|Bacteria,4NH4F@976|Bacteroidetes,47N36@768503|Cytophagia	976|Bacteroidetes	S	IgGFc binding protein	-	-	-	-	-	-	-	-	-	-	-	-	CHU_C,IgGFc_binding
BYD3_k127_8640501_2	1349785.BAUG01000030_gene1736	4.128e-05	57.0	COG1409@1|root,COG1649@1|root,COG2755@1|root,COG3227@1|root,COG4409@1|root,COG4733@1|root,COG1409@2|Bacteria,COG1649@2|Bacteria,COG2755@2|Bacteria,COG3227@2|Bacteria,COG4409@2|Bacteria,COG4733@2|Bacteria,4NFNK@976|Bacteroidetes,1HYN6@117743|Flavobacteriia	976|Bacteroidetes	G	BNR Asp-box repeat	-	-	3.2.1.18	ko:K01186	ko00511,ko00600,ko04142,map00511,map00600,map04142	-	R04018	RC00028,RC00077	ko00000,ko00001,ko01000,ko02042	-	GH33	-	BNR_2,BNR_assoc_N,CHB_HEX_C_1,Laminin_G_3
BYD3_k127_8640501_1	1168289.AJKI01000006_gene243	3.474e-29	135.0	COG1404@1|root,COG2353@1|root,COG3209@1|root,COG3210@1|root,COG5492@1|root,COG1404@2|Bacteria,COG2353@2|Bacteria,COG3209@2|Bacteria,COG3210@2|Bacteria,COG5492@2|Bacteria,4PNR0@976|Bacteroidetes,2FNS2@200643|Bacteroidia,3XJMD@558415|Marinilabiliaceae	976|Bacteroidetes	NU	COG3209 Rhs family protein	-	-	-	-	-	-	-	-	-	-	-	-	DUF1735,Laminin_G_3
BYD3_k127_8669923_1	926562.Oweho_2065	1.017e-123	411.0	COG0642@1|root,COG3850@1|root,COG2205@2|Bacteria,COG3850@2|Bacteria,4NEIS@976|Bacteroidetes,1HXGB@117743|Flavobacteriia,2PBKD@246874|Cryomorphaceae	976|Bacteroidetes	T	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase	arlS_1	-	-	-	-	-	-	-	-	-	-	-	HAMP,HATPase_c,HisKA
BYD3_k127_8669923_2	761193.Runsl_2442	3.769e-80	275.0	COG0745@1|root,COG0745@2|Bacteria,4NE77@976|Bacteroidetes,47K3Z@768503|Cytophagia	976|Bacteroidetes	T	Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain	-	-	-	ko:K07665	ko02020,map02020	M00452,M00745	-	-	ko00000,ko00001,ko00002,ko01504,ko02022	-	-	-	Response_reg,Trans_reg_C
BYD3_k127_8669923_0	1185876.BN8_05028	7.199e-171	559.0	COG1629@1|root,COG4771@2|Bacteria,4NKH2@976|Bacteroidetes,47UJD@768503|Cytophagia	976|Bacteroidetes	P	TonB dependent receptor	-	-	-	ko:K02014	-	-	-	-	ko00000,ko02000	1.B.14	-	-	Plug,TonB_dep_Rec
BYD3_k127_8669923_4	522772.Dacet_1597	7.489e-59	225.0	COG1618@1|root,COG1618@2|Bacteria	2|Bacteria	F	nucleotide phosphatase activity, acting on free nucleotides	mobA	-	2.7.4.9,2.7.7.77,3.6.1.15,3.6.1.55,3.6.3.29,3.6.3.34	ko:K00943,ko:K02013,ko:K02017,ko:K03574,ko:K03752,ko:K06928	ko00230,ko00240,ko00730,ko00790,ko01100,ko02010,map00230,map00240,map00730,map00790,map01100,map02010	M00053,M00189,M00240	R00086,R00615,R02094,R02098,R11581	RC00002	ko00000,ko00001,ko00002,ko01000,ko02000,ko03400	3.A.1.14,3.A.1.8	-	-	DUF2478,NTPase_1
BYD3_k127_8669923_3	1123278.KB893452_gene737	1.411e-75	264.0	COG0642@1|root,COG3292@1|root,COG0642@2|Bacteria,COG2205@2|Bacteria,COG3292@2|Bacteria,4NDXU@976|Bacteroidetes,47Y2E@768503|Cytophagia	976|Bacteroidetes	T	Two component regulator three Y domain protein	-	-	-	-	-	-	-	-	-	-	-	-	GAF,HATPase_c,HisKA,PAS_3,PAS_4,PAS_9,Reg_prop,Response_reg,Y_Y_Y
BYD3_k127_8681930_2	927658.AJUM01000044_gene607	1.2e-55	199.0	COG1522@1|root,COG1522@2|Bacteria,4NMEN@976|Bacteroidetes,2FPN5@200643|Bacteroidia,3XJB2@558415|Marinilabiliaceae	976|Bacteroidetes	K	helix_turn_helix ASNC type	asnC	-	-	ko:K03718	-	-	-	-	ko00000,ko03000	-	-	-	AsnC_trans_reg,HTH_24,HTH_AsnC-type
BYD3_k127_8681930_1	886379.AEWI01000010_gene615	5.737e-110	364.0	COG1893@1|root,COG1893@2|Bacteria,4NMFF@976|Bacteroidetes,2FNZU@200643|Bacteroidia,3XJ1R@558415|Marinilabiliaceae	976|Bacteroidetes	H	Ketopantoate reductase PanE/ApbA C terminal	panE	-	1.1.1.169	ko:K00077	ko00770,ko01100,ko01110,map00770,map01100,map01110	M00119	R02472	RC00726	ko00000,ko00001,ko00002,ko01000	-	-	-	ApbA,ApbA_C
BYD3_k127_8681930_4	927658.AJUM01000037_gene2320	9.827e-32	129.0	COG1433@1|root,COG1433@2|Bacteria,4NRPC@976|Bacteroidetes,2FPSP@200643|Bacteroidia	976|Bacteroidetes	S	COG NOG16874 non supervised orthologous group	-	-	-	-	-	-	-	-	-	-	-	-	C_GCAxxG_C_C
BYD3_k127_8681930_0	1168034.FH5T_06880	7.79e-130	426.0	COG2355@1|root,COG2355@2|Bacteria,4NEBG@976|Bacteroidetes,2FMPY@200643|Bacteroidia	976|Bacteroidetes	E	Renal dipeptidase family protein	-	-	3.4.13.19	ko:K01273,ko:K01274	-	-	-	-	ko00000,ko00537,ko01000,ko01002,ko04147	-	-	-	Peptidase_C26,Peptidase_M19
BYD3_k127_8681930_3	485917.Phep_1216	2.488e-49	178.0	COG0431@1|root,COG0431@2|Bacteria,4NN31@976|Bacteroidetes,1ISI3@117747|Sphingobacteriia	976|Bacteroidetes	S	PFAM NADPH-dependent FMN reductase	-	-	-	-	-	-	-	-	-	-	-	-	FMN_red
BYD3_k127_8691475_6	762982.HMPREF9442_01009	4.749e-11	64.0	COG2067@1|root,COG2067@2|Bacteria,4NDZW@976|Bacteroidetes,2FPVJ@200643|Bacteroidia	976|Bacteroidetes	I	Psort location OuterMembrane, score	porV	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_8691475_3	869213.JCM21142_83234	5.65e-58	205.0	COG0245@1|root,COG0245@2|Bacteria,4NP0N@976|Bacteroidetes,47PDR@768503|Cytophagia	976|Bacteroidetes	I	Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP)	ispF	-	4.6.1.12	ko:K01770	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	M00096	R05637	RC00002,RC01440	ko00000,ko00001,ko00002,ko01000	-	-	-	YgbB
BYD3_k127_8691475_5	761193.Runsl_4161	2.501e-30	124.0	COG1832@1|root,COG1832@2|Bacteria,4NSE8@976|Bacteroidetes,47RGM@768503|Cytophagia	976|Bacteroidetes	S	CoA binding domain	-	-	-	ko:K06929	-	-	-	-	ko00000	-	-	-	CoA_binding_2
BYD3_k127_8691475_2	1168289.AJKI01000026_gene1399	1.78e-159	515.0	COG0366@1|root,COG0366@2|Bacteria,4NEVK@976|Bacteroidetes,2FNVI@200643|Bacteroidia,3XJM5@558415|Marinilabiliaceae	976|Bacteroidetes	G	Maltogenic Amylase, C-terminal domain	-	-	-	-	-	-	-	-	-	-	-	-	Alpha-amylase,Malt_amylase_C
BYD3_k127_8691475_4	1358423.N180_11280	1.139e-57	214.0	28JY0@1|root,2Z9ND@2|Bacteria,4NIG7@976|Bacteroidetes,1IS7W@117747|Sphingobacteriia	976|Bacteroidetes	S	SusE outer membrane protein	-	-	-	ko:K21571	-	-	-	-	ko00000	-	-	-	SusE,SusF_SusE
BYD3_k127_8691475_0	1392490.JHZX01000001_gene2676	4.601e-215	678.0	COG3637@1|root,COG3637@2|Bacteria,4NE4Y@976|Bacteroidetes,1I0M4@117743|Flavobacteriia	976|Bacteroidetes	M	PFAM SusD family	-	-	-	ko:K21572	-	-	-	-	ko00000,ko02000	8.A.46.1,8.A.46.3	-	-	SusD-like_3,SusD_RagB
BYD3_k127_8691475_1	1131812.JQMS01000001_gene1017	5.504e-171	544.0	COG1629@1|root,COG4771@2|Bacteria,4P1Z5@976|Bacteroidetes,1I04A@117743|Flavobacteriia,2P0NA@237|Flavobacterium	976|Bacteroidetes	P	TonB dependent receptor	-	-	-	-	-	-	-	-	-	-	-	-	CarbopepD_reg_2,Plug,STN,TonB_dep_Rec
BYD3_k127_8692171_3	1123008.KB905693_gene1412	4.26e-21	100.0	2CJZ2@1|root,32SB4@2|Bacteria,4NSR3@976|Bacteroidetes,2FQ7M@200643|Bacteroidia,22YHG@171551|Porphyromonadaceae	976|Bacteroidetes	S	NigD-like N-terminal OB domain	-	-	-	-	-	-	-	-	-	-	-	-	NigD_C,NigD_N
BYD3_k127_8692171_1	504472.Slin_2869	1.057e-84	290.0	COG0564@1|root,COG0564@2|Bacteria,4NHCT@976|Bacteroidetes,47N1U@768503|Cytophagia	976|Bacteroidetes	J	Responsible for synthesis of pseudouridine from uracil	rluD	-	5.4.99.23	ko:K06180	-	-	-	-	ko00000,ko01000,ko03009	-	-	-	PseudoU_synth_2,S4
BYD3_k127_8692171_0	886379.AEWI01000018_gene1291	6.966e-140	460.0	COG1355@1|root,COG2078@1|root,COG1355@2|Bacteria,COG2078@2|Bacteria,4NKA5@976|Bacteroidetes,2FRBU@200643|Bacteroidia,3XJT2@558415|Marinilabiliaceae	976|Bacteroidetes	S	Memo-like protein	-	-	-	ko:K06990	-	-	-	-	ko00000,ko04812	-	-	-	AMMECR1,Memo
BYD3_k127_8692171_2	694427.Palpr_2413	3.163e-49	183.0	COG4783@1|root,COG4783@2|Bacteria,4NKG4@976|Bacteroidetes	976|Bacteroidetes	S	chaperone-mediated protein folding	-	-	-	-	-	-	-	-	-	-	-	-	TPR_19,TPR_8
BYD3_k127_873367_2	1267535.KB906767_gene3866	2.348e-78	268.0	COG4658@1|root,COG4658@2|Bacteria	2|Bacteria	C	electron transport chain	-	-	1.6.5.8	ko:K00347,ko:K03614,ko:K21163	ko01059,ko01130,map01059,map01130	M00824	-	-	ko00000,ko00001,ko00002,ko01000	-	-	-	Complex1_51K,NQR2_RnfD_RnfE,RnfC_N,UnbV_ASPIC,VCBS
BYD3_k127_873367_0	1382359.JIAL01000001_gene1322	3.753e-218	692.0	COG1225@1|root,COG1225@2|Bacteria	2|Bacteria	O	peroxiredoxin activity	-	-	-	-	-	-	-	-	-	-	-	-	DUF4369,Redoxin,Thioredoxin_8,UnbV_ASPIC,VCBS
BYD3_k127_873367_4	471852.Tcur_4562	2.358e-50	185.0	COG2128@1|root,COG2128@2|Bacteria,2IJCK@201174|Actinobacteria,4EM1P@85012|Streptosporangiales	201174|Actinobacteria	O	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity	-	-	-	-	-	-	-	-	-	-	-	-	CMD
BYD3_k127_873367_1	1536773.R70331_04575	3.705e-122	419.0	COG3525@1|root,COG3525@2|Bacteria,1TSXM@1239|Firmicutes,4I1FW@91061|Bacilli,2749N@186822|Paenibacillaceae	91061|Bacilli	G	Glycosyl hydrolase family 20, domain 2	-	-	-	-	-	-	-	-	-	-	-	-	Glyco_hydro_20,Glyco_hydro_20b
BYD3_k127_873367_5	1484460.JSWG01000001_gene2287	1.816e-23	113.0	COG3595@1|root,COG3595@2|Bacteria,4NIA2@976|Bacteroidetes,1I0CY@117743|Flavobacteriia	976|Bacteroidetes	S	Putative auto-transporter adhesin, head GIN domain	-	-	-	-	-	-	-	-	-	-	-	-	DUF2807
BYD3_k127_873367_6	1408473.JHXO01000003_gene2584	3.161e-12	77.0	2E676@1|root,330VQ@2|Bacteria,4PA7N@976|Bacteroidetes,2FZJU@200643|Bacteroidia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_873367_3	391596.PBAL39_23953	3.763e-54	216.0	COG1629@1|root,COG4771@2|Bacteria,4NEIG@976|Bacteroidetes,1IWRI@117747|Sphingobacteriia	976|Bacteroidetes	P	Outer membrane protein beta-barrel family	-	-	-	-	-	-	-	-	-	-	-	-	CarbopepD_reg_2,CarboxypepD_reg,OMP_b-brl_3,Plug
BYD3_k127_8786567_3	927658.AJUM01000037_gene1855	9.543e-60	217.0	COG0642@1|root,COG0642@2|Bacteria,4NJVF@976|Bacteroidetes,2G152@200643|Bacteroidia	976|Bacteroidetes	T	His Kinase A (phosphoacceptor) domain	-	-	-	-	-	-	-	-	-	-	-	-	HATPase_c,HisKA,Response_reg
BYD3_k127_8786567_1	1279009.ADICEAN_01064	1.659e-157	510.0	COG4784@1|root,COG4784@2|Bacteria,4PM59@976|Bacteroidetes,47MK2@768503|Cytophagia	976|Bacteroidetes	S	Peptidase family M48	-	-	-	-	-	-	-	-	-	-	-	-	Peptidase_M48
BYD3_k127_8786567_0	1168034.FH5T_04395	1.54e-211	666.0	COG0520@1|root,COG0520@2|Bacteria,4NERR@976|Bacteroidetes	976|Bacteroidetes	E	Selenocysteine lyase	-	-	-	-	-	-	-	-	-	-	-	-	Aminotran_5
BYD3_k127_8786567_2	1168034.FH5T_05125	4.617e-119	394.0	COG0454@1|root,COG0456@2|Bacteria,4NFWE@976|Bacteroidetes,2FNG4@200643|Bacteroidia	976|Bacteroidetes	K	Psort location Cytoplasmic, score 8.96	-	-	-	-	-	-	-	-	-	-	-	-	Acetyltransf_1
BYD3_k127_8786823_4	313606.M23134_02848	7.22e-38	163.0	COG4219@1|root,COG4219@2|Bacteria,4NKKC@976|Bacteroidetes,47JQV@768503|Cytophagia	976|Bacteroidetes	KT	PFAM Peptidase M56, BlaR1	-	-	-	-	-	-	-	-	-	-	-	-	Peptidase_M56
BYD3_k127_8786823_1	1168034.FH5T_08245	2.653e-106	353.0	COG0667@1|root,COG0667@2|Bacteria,4PPAM@976|Bacteroidetes,2G14T@200643|Bacteroidia	976|Bacteroidetes	C	Aldo/keto reductase family	-	-	-	-	-	-	-	-	-	-	-	-	Aldo_ket_red
BYD3_k127_8786823_0	459349.CLOAM1212	4.354e-209	658.0	COG0334@1|root,COG0334@2|Bacteria,2NNTY@2323|unclassified Bacteria	2|Bacteria	E	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase	gdh	GO:0005575,GO:0005623,GO:0009986,GO:0044464	1.4.1.4	ko:K00262	ko00220,ko00250,ko00910,ko01100,map00220,map00250,map00910,map01100	-	R00248	RC00006,RC02799	ko00000,ko00001,ko01000	-	-	-	ELFV_dehydrog,ELFV_dehydrog_N
BYD3_k127_8786823_2	999419.HMPREF1077_03332	5.543e-79	273.0	COG0524@1|root,COG0524@2|Bacteria,4NENQ@976|Bacteroidetes,2FPM3@200643|Bacteroidia,22XY8@171551|Porphyromonadaceae	976|Bacteroidetes	H	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway	rbsK	-	2.7.1.15	ko:K00852	ko00030,map00030	-	R01051,R02750	RC00002,RC00017	ko00000,ko00001,ko01000	-	-	-	PfkB
BYD3_k127_8786823_3	743722.Sph21_1686	1.881e-39	154.0	28V9W@1|root,2ZHCT@2|Bacteria,4NMQ0@976|Bacteroidetes,1IS10@117747|Sphingobacteriia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_8788880_2	1158294.JOMI01000009_gene810	3.161e-128	419.0	COG3637@1|root,COG3637@2|Bacteria,4NE4Y@976|Bacteroidetes,2FP8W@200643|Bacteroidia	976|Bacteroidetes	M	SusD family	-	-	-	ko:K21572	-	-	-	-	ko00000,ko02000	8.A.46.1,8.A.46.3	-	-	SusD-like_3,SusD_RagB
BYD3_k127_8788880_0	1158294.JOMI01000009_gene811	0.0	1195.0	COG4206@1|root,COG4206@2|Bacteria,4P258@976|Bacteroidetes,2FW53@200643|Bacteroidia	976|Bacteroidetes	P	TonB-linked outer membrane protein, SusC RagA family	-	-	-	-	-	-	-	-	-	-	-	-	CarbopepD_reg_2,Plug,TonB_dep_Rec
BYD3_k127_8788880_1	886379.AEWI01000004_gene895	1.776e-133	434.0	28PA7@1|root,2ZC3H@2|Bacteria,4NMNN@976|Bacteroidetes,2FS32@200643|Bacteroidia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_8788880_8	1202532.FF52_17928	2.564e-43	164.0	2CWMV@1|root,32T00@2|Bacteria,4NSPJ@976|Bacteroidetes,1ICVD@117743|Flavobacteriia,2NV7G@237|Flavobacterium	976|Bacteroidetes	S	Domain of unknown function (DUF5004)	-	-	-	-	-	-	-	-	-	-	-	-	DUF5004
BYD3_k127_8788880_3	929556.Solca_2308	3.911e-126	423.0	COG2197@1|root,COG2197@2|Bacteria,4PKZT@976|Bacteroidetes,1IRP0@117747|Sphingobacteriia	976|Bacteroidetes	KT	response regulator	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_8788880_5	1123008.KB905697_gene3138	2.768e-95	329.0	COG2885@1|root,COG2885@2|Bacteria,4NI3U@976|Bacteroidetes,2FQF1@200643|Bacteroidia,230CU@171551|Porphyromonadaceae	976|Bacteroidetes	M	OmpA family	-	-	-	ko:K03286	-	-	-	-	ko00000,ko02000	1.B.6	-	-	OMP_b-brl_2,OmpA
BYD3_k127_8788880_10	745718.JADT01000001_gene1713	1.101e-06	58.0	COG3637@1|root,COG3637@2|Bacteria,4NR9K@976|Bacteroidetes,1I34P@117743|Flavobacteriia	976|Bacteroidetes	M	Opacity protein	-	-	-	-	-	-	-	-	-	-	-	-	OMP_b-brl_2
BYD3_k127_8788880_4	1168034.FH5T_08335	1.193e-105	367.0	COG4251@1|root,COG5000@1|root,COG4251@2|Bacteria,COG5000@2|Bacteria,4PM7A@976|Bacteroidetes	976|Bacteroidetes	T	His Kinase A (phosphoacceptor) domain	-	-	-	-	-	-	-	-	-	-	-	-	GAF,HATPase_c,HNOBA,HisKA,PAS_3,PAS_9,Response_reg
BYD3_k127_8788880_7	472759.Nhal_0728	2.332e-51	186.0	COG0784@1|root,COG0784@2|Bacteria,1QUN7@1224|Proteobacteria,1S4GM@1236|Gammaproteobacteria,1WYNP@135613|Chromatiales	135613|Chromatiales	T	cheY-homologous receiver domain	-	-	-	-	-	-	-	-	-	-	-	-	Response_reg
BYD3_k127_8788880_6	1191523.MROS_1822	9.067e-71	260.0	COG2202@1|root,COG3452@1|root,COG4251@1|root,COG2202@2|Bacteria,COG3452@2|Bacteria,COG4251@2|Bacteria	2|Bacteria	T	photoreceptor activity	-	-	-	-	-	-	-	-	-	-	-	-	CHASE,GGDEF,HATPase_c,HisKA,PAS,PAS_3,PAS_4,PAS_9,Response_reg
BYD3_k127_8788880_9	468059.AUHA01000007_gene2687	5.865e-43	160.0	COG0474@1|root,COG0474@2|Bacteria,4NERM@976|Bacteroidetes,1IR88@117747|Sphingobacteriia	976|Bacteroidetes	P	TIGRFAM ATPase, P-type, K Mg Cd Cu Zn Na Ca Na H-transporter	-	-	3.6.3.8	ko:K01537	-	-	-	-	ko00000,ko01000	3.A.3.2	-	-	Cation_ATPase_C,Cation_ATPase_N,E1-E2_ATPase,Hydrolase,Hydrolase_3
BYD3_k127_8829119_1	1122176.KB903531_gene2951	6.562e-51	196.0	COG4206@1|root,COG4206@2|Bacteria,4NGYD@976|Bacteroidetes,1J0XR@117747|Sphingobacteriia	976|Bacteroidetes	H	Psort location OuterMembrane, score	-	-	-	-	-	-	-	-	-	-	-	-	TonB_dep_Rec
BYD3_k127_8829119_0	1122176.KB903531_gene2952	1.769e-231	752.0	COG0457@1|root,COG1729@1|root,COG0457@2|Bacteria,COG1729@2|Bacteria,4NE4W@976|Bacteroidetes,1IPPH@117747|Sphingobacteriia	976|Bacteroidetes	S	PFAM Tetratricopeptide	-	-	-	-	-	-	-	-	-	-	-	-	TPR_16,TPR_2,TPR_21,TPR_6,TPR_8
BYD3_k127_8829119_2	929556.Solca_3860	7.998e-48	184.0	28MAS@1|root,318XW@2|Bacteria,4PPYP@976|Bacteroidetes,1IYW2@117747|Sphingobacteriia	976|Bacteroidetes	S	Protein of unknown function, DUF481	-	-	-	-	-	-	-	-	-	-	-	-	DUF481
BYD3_k127_8829119_3	1267533.KB906738_gene2197	1.114e-10	63.0	COG3515@1|root,COG3515@2|Bacteria,3Y6SG@57723|Acidobacteria	57723|Acidobacteria	S	Protein conserved in bacteria	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_8860280_0	1168034.FH5T_18595	2.942e-169	554.0	COG1086@1|root,COG1086@2|Bacteria,4NERY@976|Bacteroidetes,2FMAA@200643|Bacteroidia	976|Bacteroidetes	GM	Polysaccharide biosynthesis protein	cap5D	-	-	-	-	-	-	-	-	-	-	-	CoA_binding_3,Polysacc_synt_2
BYD3_k127_8860280_2	700598.Niako_4598	4.957e-42	168.0	COG3078@1|root,COG3078@2|Bacteria,4NIGK@976|Bacteroidetes,1INXJ@117747|Sphingobacteriia	976|Bacteroidetes	P	TonB-dependent receptor	-	-	-	-	-	-	-	-	-	-	-	-	CarbopepD_reg_2
BYD3_k127_8860280_1	694427.Palpr_0203	3.226e-95	315.0	COG0177@1|root,COG0177@2|Bacteria,4NFF3@976|Bacteroidetes,2FM8U@200643|Bacteroidia,22WI0@171551|Porphyromonadaceae	976|Bacteroidetes	L	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate	nth	-	4.2.99.18	ko:K10773	ko03410,map03410	-	-	-	ko00000,ko00001,ko01000,ko03400	-	-	-	EndIII_4Fe-2S,HhH-GPD
BYD3_k127_8892188_11	1239415.CM001837_gene43	1.297e-16	81.0	COG0730@1|root,COG0730@2|Bacteria,4NTZ8@976|Bacteroidetes,1I2UM@117743|Flavobacteriia	976|Bacteroidetes	S	membrane transporter protein	-	-	-	ko:K07090	-	-	-	-	ko00000	-	-	-	TauE
BYD3_k127_8892188_10	385682.AFSL01000009_gene2503	6.419e-22	95.0	COG2768@1|root,COG2768@2|Bacteria,4NUN8@976|Bacteroidetes,2FUIC@200643|Bacteroidia,3XKDM@558415|Marinilabiliaceae	976|Bacteroidetes	C	4Fe-4S binding domain	-	-	-	-	-	-	-	-	-	-	-	-	Fer4
BYD3_k127_8892188_2	1121129.KB903359_gene1756	6.522e-167	529.0	COG0468@1|root,COG0468@2|Bacteria,4NEXT@976|Bacteroidetes,2FN5D@200643|Bacteroidia,22WEY@171551|Porphyromonadaceae	976|Bacteroidetes	L	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage	recA	-	-	ko:K03553	ko03440,map03440	M00729	-	-	ko00000,ko00001,ko00002,ko03400	-	-	-	RecA
BYD3_k127_8892188_8	1408473.JHXO01000005_gene1624	2.193e-58	206.0	COG1225@1|root,COG1225@2|Bacteria,4NNGK@976|Bacteroidetes,2FNTB@200643|Bacteroidia	976|Bacteroidetes	O	AhpC Tsa family	bcp	-	1.11.1.15	ko:K03564	-	-	-	-	ko00000,ko01000	-	-	-	AhpC-TSA
BYD3_k127_8892188_7	1121129.KB903368_gene648	1.564e-66	233.0	COG0357@1|root,COG0357@2|Bacteria,4NEJG@976|Bacteroidetes,2FMRQ@200643|Bacteroidia,22X1I@171551|Porphyromonadaceae	976|Bacteroidetes	J	Specifically methylates the N7 position of a guanine in 16S rRNA	rsmG	GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016435,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0036265,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0070043,GO:0070475,GO:0070476,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360	2.1.1.170	ko:K03501	-	-	-	-	ko00000,ko01000,ko03009,ko03036	-	-	-	GidB
BYD3_k127_8892188_6	1168034.FH5T_12430	7.383e-71	245.0	COG1595@1|root,COG1595@2|Bacteria,4NIRG@976|Bacteroidetes,2FRYA@200643|Bacteroidia	976|Bacteroidetes	K	Belongs to the sigma-70 factor family. ECF subfamily	-	-	-	ko:K03088	-	-	-	-	ko00000,ko03021	-	-	-	Sigma70_r2,Sigma70_r4_2
BYD3_k127_8892188_4	929556.Solca_2271	5.605e-91	312.0	COG1215@1|root,COG1215@2|Bacteria,4NESG@976|Bacteroidetes,1IQGQ@117747|Sphingobacteriia	976|Bacteroidetes	M	PFAM Glycosyl transferase family 2	-	-	-	-	-	-	-	-	-	-	-	-	Glyco_tranf_2_3,Glycos_transf_2
BYD3_k127_8892188_1	1189619.pgond44_09966	3.824e-169	538.0	COG0343@1|root,COG0343@2|Bacteria,4NE15@976|Bacteroidetes,1HXAZ@117743|Flavobacteriia,4C3H6@83612|Psychroflexus	976|Bacteroidetes	J	Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine)	tgt	-	2.4.2.29	ko:K00773	-	-	R03789,R10209	RC00063	ko00000,ko01000,ko03016	-	-	-	TGT
BYD3_k127_8892188_3	1408473.JHXO01000006_gene1066	2.825e-115	382.0	COG0795@1|root,COG0795@2|Bacteria,4NF8Y@976|Bacteroidetes,2FM2K@200643|Bacteroidia	976|Bacteroidetes	S	Permease, YjgP YjgQ family	lptG	-	-	ko:K11720	ko02010,map02010	M00320	-	-	ko00000,ko00001,ko00002,ko02000	1.B.42.1	-	-	YjgP_YjgQ
BYD3_k127_8892188_0	1168289.AJKI01000014_gene2068	4.837e-271	840.0	COG4799@1|root,COG4799@2|Bacteria,4NEMJ@976|Bacteroidetes,2FPY6@200643|Bacteroidia,3XJAQ@558415|Marinilabiliaceae	976|Bacteroidetes	I	Carboxyl transferase domain	-	-	-	-	-	-	-	-	-	-	-	-	Carboxyl_trans
BYD3_k127_8892188_9	709991.Odosp_1779	1.805e-24	106.0	COG4770@1|root,COG4770@2|Bacteria,4NWQ0@976|Bacteroidetes,2FUXX@200643|Bacteroidia,22YSD@171551|Porphyromonadaceae	976|Bacteroidetes	I	Biotin-requiring enzyme	-	-	-	-	-	-	-	-	-	-	-	-	Biotin_lipoyl
BYD3_k127_8892188_5	585543.HMPREF0969_03191	1.54e-85	291.0	COG1947@1|root,COG1947@2|Bacteria,4NGFC@976|Bacteroidetes,2FM2B@200643|Bacteroidia,4ANUK@815|Bacteroidaceae	976|Bacteroidetes	F	Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol	ispE	GO:0003674,GO:0003824,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0044237,GO:0050515	2.7.1.148	ko:K00919	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	M00096	R05634	RC00002,RC01439	ko00000,ko00001,ko00002,ko01000	-	-	-	GHMP_kinases_C,GHMP_kinases_N
BYD3_k127_8892188_12	869213.JCM21142_31175	8.448e-12	66.0	COG0305@1|root,COG0305@2|Bacteria,4NF8P@976|Bacteroidetes,47JB5@768503|Cytophagia	976|Bacteroidetes	L	Participates in initiation and elongation during chromosome replication	dnaB	-	3.6.4.12	ko:K02314	ko03030,ko04112,map03030,map04112	-	-	-	ko00000,ko00001,ko01000,ko03032	-	-	-	DnaB,DnaB_C
BYD3_k127_8907771_0	293826.Amet_0190	5.517e-98	347.0	COG5337@1|root,COG5337@2|Bacteria,1TRAW@1239|Firmicutes,24AQY@186801|Clostridia,36RHJ@31979|Clostridiaceae	186801|Clostridia	M	Fn3 associated	-	-	-	-	-	-	-	-	-	-	-	-	CHB_HEX_C_1,CotH,Dockerin_1,Fn3_assoc,LTD
BYD3_k127_8907771_1	760192.Halhy_3709	1.804e-31	131.0	COG1309@1|root,COG1309@2|Bacteria,4NQ99@976|Bacteroidetes,1ISRH@117747|Sphingobacteriia	976|Bacteroidetes	K	PFAM Bacterial regulatory proteins, tetR family	-	-	-	-	-	-	-	-	-	-	-	-	TetR_N
BYD3_k127_8907771_2	1347342.BN863_1710	9.52e-22	102.0	COG1538@1|root,COG1538@2|Bacteria,4NF4X@976|Bacteroidetes,1HYW1@117743|Flavobacteriia	976|Bacteroidetes	MU	Outer membrane efflux protein	-	-	-	-	-	-	-	-	-	-	-	-	OEP
BYD3_k127_8912777_2	1392490.JHZX01000001_gene1281	0.0001407	48.0	2CH0Y@1|root,3309M@2|Bacteria,4NY17@976|Bacteroidetes,1I6TX@117743|Flavobacteriia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_8912777_0	411154.GFO_3198	5.572e-107	372.0	COG2755@1|root,COG4783@1|root,COG2755@2|Bacteria,COG4783@2|Bacteria,4NHX6@976|Bacteroidetes,1HZWX@117743|Flavobacteriia	976|Bacteroidetes	E	chaperone-mediated protein folding	-	-	-	-	-	-	-	-	-	-	-	-	Lipase_GDSL_2
BYD3_k127_8912777_1	471854.Dfer_1013	7.967e-96	331.0	COG0702@1|root,COG0702@2|Bacteria,4NJQQ@976|Bacteroidetes,47K1D@768503|Cytophagia	976|Bacteroidetes	GM	SusD family	-	-	-	ko:K21572	-	-	-	-	ko00000,ko02000	8.A.46.1,8.A.46.3	-	-	SusD-like_3,SusD_RagB
BYD3_k127_8924769_2	1121335.Clst_0569	1.186e-08	65.0	COG1331@1|root,COG1331@2|Bacteria,1TPRD@1239|Firmicutes,248PD@186801|Clostridia,3WHE8@541000|Ruminococcaceae	186801|Clostridia	O	Protein of unknown function, DUF255	-	-	-	ko:K06888	-	-	-	-	ko00000	-	-	-	GlcNAc_2-epim,Thioredox_DsbH
BYD3_k127_8924769_1	1121904.ARBP01000027_gene710	1.038e-18	88.0	COG1629@1|root,COG4771@2|Bacteria,4NEIG@976|Bacteroidetes,47JGS@768503|Cytophagia	976|Bacteroidetes	P	TonB-dependent Receptor Plug	-	-	-	-	-	-	-	-	-	-	-	-	CarbopepD_reg_2,OMP_b-brl_3
BYD3_k127_8924769_0	1408473.JHXO01000008_gene2845	2.979e-139	467.0	COG1629@1|root,COG4771@2|Bacteria,4NEIG@976|Bacteroidetes,2FM1K@200643|Bacteroidia	976|Bacteroidetes	P	TonB-dependent receptor	-	-	-	-	-	-	-	-	-	-	-	-	CarbopepD_reg_2,CarboxypepD_reg,OMP_b-brl_3,Plug
BYD3_k127_8924769_3	694427.Palpr_1541	7.976e-06	48.0	COG3279@1|root,COG3279@2|Bacteria,4NU8X@976|Bacteroidetes,2FR3K@200643|Bacteroidia	976|Bacteroidetes	KT	LytTr DNA-binding domain	-	-	-	-	-	-	-	-	-	-	-	-	LytTR
BYD3_k127_8970548_13	929556.Solca_2437	3.637e-54	204.0	28J2U@1|root,2Z8Z5@2|Bacteria,4NHYM@976|Bacteroidetes,1IUG2@117747|Sphingobacteriia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_8970548_15	880071.Fleli_3065	2.823e-16	86.0	2EAD7@1|root,334H1@2|Bacteria,4PN3I@976|Bacteroidetes	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_8970548_12	485917.Phep_3274	6.366e-60	215.0	COG4221@1|root,COG4221@2|Bacteria,4PMFJ@976|Bacteroidetes	976|Bacteroidetes	S	Belongs to the short-chain dehydrogenases reductases (SDR) family	-	-	-	-	-	-	-	-	-	-	-	-	adh_short
BYD3_k127_8970548_3	1121129.KB903359_gene1589	4.759e-141	457.0	COG3426@1|root,COG3426@2|Bacteria,4NJBW@976|Bacteroidetes,2FMMN@200643|Bacteroidia,22XF4@171551|Porphyromonadaceae	976|Bacteroidetes	H	Belongs to the acetokinase family	buk	-	2.7.2.7	ko:K00929	ko00650,ko01100,map00650,map01100	-	R01688	RC00002,RC00043	ko00000,ko00001,ko01000	-	-	-	Acetate_kinase
BYD3_k127_8970548_9	1123008.KB905699_gene1910	6.171e-92	311.0	COG0280@1|root,COG0280@2|Bacteria,4NJPR@976|Bacteroidetes,2FN8U@200643|Bacteroidia,22XQ7@171551|Porphyromonadaceae	976|Bacteroidetes	C	Phosphate acetyl/butaryl transferase	ptb	-	2.3.1.19	ko:K00634	ko00650,ko01100,map00650,map01100	-	R01174	RC00004,RC02816	ko00000,ko00001,ko01000	-	-	-	PTA_PTB
BYD3_k127_8970548_1	869213.JCM21142_52146	1.77e-175	558.0	COG0282@1|root,COG0282@2|Bacteria,4NFI0@976|Bacteroidetes,47NZB@768503|Cytophagia	976|Bacteroidetes	C	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction	ackA	-	2.7.2.1	ko:K00925	ko00430,ko00620,ko00640,ko00680,ko00720,ko01100,ko01120,ko01200,map00430,map00620,map00640,map00680,map00720,map01100,map01120,map01200	M00357,M00579	R00315,R01353	RC00002,RC00043	ko00000,ko00001,ko00002,ko01000	-	-	-	Acetate_kinase
BYD3_k127_8970548_8	1408473.JHXO01000007_gene992	8.977e-119	389.0	COG1250@1|root,COG1250@2|Bacteria,4NGU8@976|Bacteroidetes,2FPSD@200643|Bacteroidia	976|Bacteroidetes	I	3-hydroxybutyryl-CoA dehydrogenase	hbd	-	1.1.1.157	ko:K00074	ko00360,ko00362,ko00650,ko01100,ko01120,map00360,map00362,map00650,map01100,map01120	-	R01976,R05576,R06941	RC00029,RC00117	ko00000,ko00001,ko01000	-	-	-	3HCDH,3HCDH_N
BYD3_k127_8970548_2	869213.JCM21142_52144	2.999e-145	466.0	COG0280@1|root,COG0280@2|Bacteria,4NGX5@976|Bacteroidetes,47KUW@768503|Cytophagia	976|Bacteroidetes	C	belongs to the CobB CobQ family	pta	-	2.3.1.8	ko:K00625,ko:K13788	ko00430,ko00620,ko00640,ko00680,ko00720,ko01100,ko01120,ko01200,map00430,map00620,map00640,map00680,map00720,map01100,map01120,map01200	M00357,M00579	R00230,R00921	RC00004,RC02746,RC02816	ko00000,ko00001,ko00002,ko01000	-	-	-	AAA_26,DRTGG,PTA_PTB
BYD3_k127_8970548_0	700598.Niako_6795	0.0	1122.0	COG0247@1|root,COG0277@1|root,COG0247@2|Bacteria,COG0277@2|Bacteria,4NEK3@976|Bacteroidetes,1IPPB@117747|Sphingobacteriia	976|Bacteroidetes	C	FAD linked oxidases, C-terminal domain	-	-	-	-	-	-	-	-	-	-	-	-	FAD-oxidase_C,FAD_binding_4,Fer4_17
BYD3_k127_8970548_11	742817.HMPREF9449_01663	5.495e-70	243.0	COG2197@1|root,COG2197@2|Bacteria,4NKAD@976|Bacteroidetes,2FSDF@200643|Bacteroidia,22Y9Y@171551|Porphyromonadaceae	976|Bacteroidetes	K	COGs COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain	-	-	-	-	-	-	-	-	-	-	-	-	GerE,Response_reg
BYD3_k127_8970548_10	709991.Odosp_3424	1.639e-70	250.0	COG4585@1|root,COG4585@2|Bacteria,4NI65@976|Bacteroidetes,2FRZ7@200643|Bacteroidia,22YG2@171551|Porphyromonadaceae	976|Bacteroidetes	T	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase	-	-	-	-	-	-	-	-	-	-	-	-	HATPase_c,HisKA_3,TPR_12,TPR_8
BYD3_k127_8970548_17	1121015.N789_12070	5.234e-11	69.0	2APC5@1|root,31EED@2|Bacteria,1QBPZ@1224|Proteobacteria,1T79X@1236|Gammaproteobacteria,1X904@135614|Xanthomonadales	135614|Xanthomonadales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_8970548_5	1168034.FH5T_06895	1.13e-128	420.0	COG0820@1|root,COG0820@2|Bacteria,4NFH5@976|Bacteroidetes,2FPJH@200643|Bacteroidia	976|Bacteroidetes	J	Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs	rlmN	GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0006139,GO:0006364,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016740,GO:0016741,GO:0022613,GO:0030488,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0070475,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140101,GO:0140102,GO:1901360	2.1.1.192	ko:K06941	-	-	-	-	ko00000,ko01000,ko03009	-	-	-	Fer4_14,Radical_SAM
BYD3_k127_8970548_6	385682.AFSL01000073_gene1390	1.87e-126	436.0	COG3291@1|root,COG3591@1|root,COG3291@2|Bacteria,COG3591@2|Bacteria,4NG2K@976|Bacteroidetes	976|Bacteroidetes	E	Pkd domain containing protein	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_8970548_4	1168034.FH5T_16690	9.725e-133	432.0	COG2008@1|root,COG2008@2|Bacteria,4NEIH@976|Bacteroidetes,2FPGW@200643|Bacteroidia	976|Bacteroidetes	E	Threonine aldolase	ltaE	-	4.1.2.48	ko:K01620	ko00260,ko01100,ko01110,ko01120,ko01130,ko01230,map00260,map01100,map01110,map01120,map01130,map01230	-	R00751,R06171	RC00312,RC00372	ko00000,ko00001,ko01000	-	-	-	Beta_elim_lyase
BYD3_k127_8970548_7	999419.HMPREF1077_01146	3.603e-123	407.0	COG0809@1|root,COG0809@2|Bacteria,4NDZ5@976|Bacteroidetes,2FNJD@200643|Bacteroidia,22X1R@171551|Porphyromonadaceae	976|Bacteroidetes	H	Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)	queA	-	2.4.99.17	ko:K07568	-	-	-	-	ko00000,ko01000,ko03016	-	-	-	Queuosine_synth
BYD3_k127_8970548_14	1408473.JHXO01000005_gene1690	2.934e-48	187.0	COG1193@1|root,COG1193@2|Bacteria,4NNNV@976|Bacteroidetes,2FMM1@200643|Bacteroidia	976|Bacteroidetes	L	Psort location Cytoplasmic, score 8.96	-	-	-	-	-	-	-	-	-	-	-	-	DUF2027,Smr
BYD3_k127_8970548_16	102125.Xen7305DRAFT_00044840	5.548e-13	78.0	COG0457@1|root,COG4995@1|root,COG0457@2|Bacteria,COG4995@2|Bacteria,1G135@1117|Cyanobacteria	1117|Cyanobacteria	U	tetratricopeptide repeat	-	-	-	-	-	-	-	-	-	-	-	-	ANAPC5,CHAT,TPR_12,TPR_7,TPR_8
BYD3_k127_898679_5	1408473.JHXO01000005_gene1551	1.424e-14	73.0	COG3507@1|root,COG3507@2|Bacteria,4PKXQ@976|Bacteroidetes,2FNWV@200643|Bacteroidia	976|Bacteroidetes	G	Belongs to the glycosyl hydrolase 43 family	xynD_2	-	-	-	-	-	-	-	-	-	-	-	CBM_6,Glyco_hydro_43
BYD3_k127_898679_6	1453505.JASY01000001_gene3573	1.771e-05	48.0	COG3669@1|root,COG3669@2|Bacteria,4NEDX@976|Bacteroidetes,1HZYU@117743|Flavobacteriia,2NUPG@237|Flavobacterium	976|Bacteroidetes	G	Pfam F5 8 type C domain	-	-	3.2.1.51	ko:K01206	ko00511,map00511	-	-	-	ko00000,ko00001,ko01000,ko04147	-	GH29	-	Alpha_L_fucos,CHB_HEX_C_1,F5_F8_type_C,Fn3_assoc
BYD3_k127_898679_3	744872.Spica_2348	4.105e-141	455.0	COG0656@1|root,COG0656@2|Bacteria,2J5TE@203691|Spirochaetes	203691|Spirochaetes	C	Aldo/keto reductase family	-	-	1.1.1.2	ko:K00002	ko00010,ko00040,ko00561,ko00930,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00040,map00561,map00930,map01100,map01110,map01120,map01130,map01220	M00014	R00746,R01041,R01481,R05231	RC00087,RC00088,RC00099,RC00108	ko00000,ko00001,ko00002,ko01000,ko04147	-	-	-	Aldo_ket_red
BYD3_k127_898679_1	278957.ABEA03000218_gene250	1.101e-180	570.0	COG1063@1|root,COG1063@2|Bacteria,46Z6B@74201|Verrucomicrobia,3K9BT@414999|Opitutae	414999|Opitutae	E	Alcohol dehydrogenase GroES-like domain	-	-	-	-	-	-	-	-	-	-	-	-	ADH_N,ADH_zinc_N
BYD3_k127_898679_4	1122919.KB905555_gene936	1.733e-58	205.0	COG4154@1|root,COG4154@2|Bacteria,1V402@1239|Firmicutes,4HJRX@91061|Bacilli,26XPH@186822|Paenibacillaceae	91061|Bacilli	G	Belongs to the RbsD FucU family	fucU	-	5.1.3.29	ko:K02431	-	-	R10764	RC00563	ko00000,ko01000	-	-	-	RbsD_FucU
BYD3_k127_898679_0	1168034.FH5T_02360	0.0	1419.0	COG1472@1|root,COG1472@2|Bacteria,4NE90@976|Bacteroidetes,2FMV4@200643|Bacteroidia	976|Bacteroidetes	G	Glycosyl hydrolase family 3	-	-	3.2.1.21	ko:K05349	ko00460,ko00500,ko00940,ko01100,ko01110,map00460,map00500,map00940,map01100,map01110	-	R00026,R02558,R02887,R02985,R03527,R04949,R04998,R10035,R10039,R10040	RC00049,RC00059,RC00171,RC00262,RC00397,RC00451,RC00714,RC00746,RC01248	ko00000,ko00001,ko01000	-	GH3	-	Fn3-like,Glyco_hydro_3,Glyco_hydro_3_C,PA14
BYD3_k127_898679_2	869213.JCM21142_93858	5.71e-170	548.0	COG3669@1|root,COG3669@2|Bacteria,4NEAP@976|Bacteroidetes,47PH6@768503|Cytophagia	976|Bacteroidetes	G	Alpha-L-fucosidase	-	-	3.2.1.51	ko:K01206	ko00511,map00511	-	-	-	ko00000,ko00001,ko01000,ko04147	-	GH29	-	Alpha_L_fucos,Fucosidase_C
BYD3_k127_9009386_3	558169.AGAV01000020_gene2583	1.037e-23	100.0	COG0580@1|root,COG0580@2|Bacteria,1TP4T@1239|Firmicutes,4HAWP@91061|Bacilli	91061|Bacilli	U	Belongs to the MIP aquaporin (TC 1.A.8) family	glpF	-	-	ko:K02440	-	-	-	-	ko00000,ko02000	1.A.8.1,1.A.8.2	-	-	MIP
BYD3_k127_9009386_2	1408473.JHXO01000005_gene1744	6.936e-86	301.0	COG5000@1|root,COG5000@2|Bacteria,4NEWF@976|Bacteroidetes,2FP7E@200643|Bacteroidia	976|Bacteroidetes	T	ATPase histidine kinase DNA gyrase B HSP90 domain protein	-	-	-	-	-	-	-	-	-	-	-	-	HATPase_c
BYD3_k127_9009386_1	1237149.C900_04093	6.102e-153	499.0	COG2204@1|root,COG2204@2|Bacteria,4NE89@976|Bacteroidetes,47JF9@768503|Cytophagia	976|Bacteroidetes	T	two component, sigma54 specific, transcriptional regulator, Fis family	-	-	-	-	-	-	-	-	-	-	-	-	HTH_8,Response_reg,Sigma54_activat
BYD3_k127_9009386_0	700598.Niako_1201	6.263e-183	600.0	COG0577@1|root,COG0577@2|Bacteria,4NDUK@976|Bacteroidetes,1INSB@117747|Sphingobacteriia	976|Bacteroidetes	V	TIGRFAM Acidobacterial duplicated orphan permease	-	-	-	ko:K02004	-	M00258	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	FtsX,MacB_PCD
BYD3_k127_9009386_4	415426.Hbut_1455	5.801e-11	67.0	COG4231@1|root,arCOG01609@2157|Archaea,2XPY7@28889|Crenarchaeota	28889|Crenarchaeota	C	Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates	-	-	1.2.7.8	ko:K00179	-	-	-	-	br01601,ko00000,ko01000	-	-	-	Fer4,POR_N,TPP_enzyme_C
BYD3_k127_9014337_8	1168034.FH5T_01210	1.167e-21	96.0	COG0795@1|root,COG0795@2|Bacteria,4NE8B@976|Bacteroidetes,2FP6P@200643|Bacteroidia	976|Bacteroidetes	S	Permease, YjgP YjgQ family	-	-	-	ko:K07091	ko02010,map02010	M00320	-	-	ko00000,ko00001,ko00002,ko02000	1.B.42.1	-	-	YjgP_YjgQ
BYD3_k127_9014337_7	869213.JCM21142_73070	6.424e-44	162.0	COG3832@1|root,COG3832@2|Bacteria,4NNY1@976|Bacteroidetes,47R94@768503|Cytophagia	976|Bacteroidetes	S	Pfam Activator of Hsp90 ATPase homolog 1-like protein	-	-	-	-	-	-	-	-	-	-	-	-	AHSA1
BYD3_k127_9014337_2	1239962.C943_03207	5.029e-107	359.0	COG1404@1|root,COG1404@2|Bacteria,4NI53@976|Bacteroidetes,47U3J@768503|Cytophagia	976|Bacteroidetes	O	Subtilase family	-	-	3.4.21.62,3.4.21.66	ko:K01342,ko:K08651	ko02024,map02024	-	-	-	ko00000,ko00001,ko01000,ko01002,ko03110	-	-	-	Peptidase_S8
BYD3_k127_9014337_10	880071.Fleli_1905	4.978e-11	68.0	2AD7J@1|root,312WH@2|Bacteria,4NR1A@976|Bacteroidetes,47RHF@768503|Cytophagia	976|Bacteroidetes	S	Domain of unknown function (DUF1987)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1987
BYD3_k127_9014337_0	362418.IW19_13450	2.126e-202	642.0	COG0665@1|root,COG0723@1|root,COG0665@2|Bacteria,COG0723@2|Bacteria,4NFT6@976|Bacteroidetes,1I14A@117743|Flavobacteriia,2NV3V@237|Flavobacterium	976|Bacteroidetes	CE	FAD dependent oxidoreductase	-	-	-	-	-	-	-	-	-	-	-	-	DAO,Rieske
BYD3_k127_9014337_6	404380.Gbem_2817	3.656e-54	195.0	COG4119@1|root,COG4119@2|Bacteria,1RHCE@1224|Proteobacteria	1224|Proteobacteria	L	NUDIX hydrolase	-	-	-	-	-	-	-	-	-	-	-	-	NUDIX
BYD3_k127_9014337_1	1444712.BN1013_00615	2.784e-127	414.0	COG0346@1|root,COG0346@2|Bacteria	2|Bacteria	E	lactoylglutathione lyase activity	mhqO	-	-	ko:K15975	-	-	-	-	ko00000	-	-	-	Glyoxalase
BYD3_k127_9014337_5	1444712.BN1013_00614	6.403e-69	239.0	COG0400@1|root,COG0400@2|Bacteria	2|Bacteria	S	palmitoyl-(protein) hydrolase activity	-	-	-	ko:K06999,ko:K15975	-	-	-	-	ko00000	-	-	-	Abhydrolase_2,Glyoxalase
BYD3_k127_9014337_4	991.IW20_20735	2.657e-75	261.0	COG0300@1|root,COG0300@2|Bacteria,4NJUU@976|Bacteroidetes,1I05D@117743|Flavobacteriia	976|Bacteroidetes	S	Belongs to the short-chain dehydrogenases reductases (SDR) family	-	-	-	ko:K07124	-	-	-	-	ko00000	-	-	-	adh_short
BYD3_k127_9014337_3	391937.NA2_15122	2.356e-79	281.0	COG0842@1|root,COG0842@2|Bacteria,1R3XD@1224|Proteobacteria,2U1FZ@28211|Alphaproteobacteria,43IWI@69277|Phyllobacteriaceae	28211|Alphaproteobacteria	U	Transport permease protein	-	-	-	ko:K01992	-	M00254	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	ABC2_membrane
BYD3_k127_9055995_9	1168034.FH5T_14430	8.755e-09	60.0	COG3828@1|root,COG3828@2|Bacteria,4NRZF@976|Bacteroidetes	976|Bacteroidetes	S	Trehalose utilisation	-	-	-	ko:K09992	-	-	-	-	ko00000	-	-	-	ThuA
BYD3_k127_9055995_7	1286632.P278_00790	1.092e-37	144.0	COG3070@1|root,COG3070@2|Bacteria,4NSGZ@976|Bacteroidetes,1I4CE@117743|Flavobacteriia	976|Bacteroidetes	K	TfoX N-terminal domain	-	-	-	-	-	-	-	-	-	-	-	-	TfoX_N
BYD3_k127_9055995_10	1026882.MAMP_00165	6.128e-05	52.0	COG4319@1|root,COG4319@2|Bacteria,1NCYK@1224|Proteobacteria,1SIVG@1236|Gammaproteobacteria	1236|Gammaproteobacteria	S	SnoaL-like domain	-	-	-	-	-	-	-	-	-	-	-	-	DUF4440
BYD3_k127_9055995_0	886379.AEWI01000012_gene1140	1.737e-243	790.0	COG0642@1|root,COG3292@1|root,COG2205@2|Bacteria,COG3292@2|Bacteria,4NDXU@976|Bacteroidetes,2FX61@200643|Bacteroidia,3XKI8@558415|Marinilabiliaceae	976|Bacteroidetes	T	His Kinase A (phosphoacceptor) domain	-	-	-	-	-	-	-	-	-	-	-	-	HATPase_c,HTH_18,HisKA,Reg_prop,Response_reg,Y_Y_Y
BYD3_k127_9055995_8	1121904.ARBP01000018_gene2665	3.381e-34	136.0	COG3631@1|root,COG3631@2|Bacteria,4NVWJ@976|Bacteroidetes,47WCU@768503|Cytophagia	976|Bacteroidetes	S	SnoaL-like domain	-	-	-	-	-	-	-	-	-	-	-	-	SnoaL_4
BYD3_k127_9055995_6	1150600.ADIARSV_0251	3.177e-42	162.0	COG2114@1|root,COG2114@2|Bacteria,4PKG4@976|Bacteroidetes,1IUAT@117747|Sphingobacteriia	976|Bacteroidetes	T	Pfam Adenylate and Guanylate cyclase catalytic domain	-	-	-	-	-	-	-	-	-	-	-	-	SatD
BYD3_k127_9055995_1	742727.HMPREF9447_00111	3.692e-215	676.0	COG3842@1|root,COG3842@2|Bacteria,4NEZ6@976|Bacteroidetes,2G2SA@200643|Bacteroidia,4AW3Q@815|Bacteroidaceae	976|Bacteroidetes	P	Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system	potA	-	3.6.3.29,3.6.3.30,3.6.3.31	ko:K02010,ko:K02017,ko:K10112,ko:K11072	ko02010,map02010	M00189,M00190,M00194,M00196,M00197,M00200,M00201,M00206,M00207,M00299,M00491,M00602,M00605,M00606	-	-	ko00000,ko00001,ko00002,ko01000,ko02000	3.A.1.1,3.A.1.10,3.A.1.11.1,3.A.1.8	-	-	ABC_tran,TOBE_2
BYD3_k127_9055995_4	585543.HMPREF0969_00558	6.552e-118	384.0	COG1176@1|root,COG1176@2|Bacteria,4P0H6@976|Bacteroidetes,2FN37@200643|Bacteroidia,4AM62@815|Bacteroidaceae	976|Bacteroidetes	P	Psort location CytoplasmicMembrane, score 10.00	-	-	-	ko:K11071	ko02010,map02010	M00299	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.11.1	-	-	BPD_transp_1
BYD3_k127_9055995_3	411476.BACOVA_00084	1.711e-119	389.0	COG1177@1|root,COG1177@2|Bacteria,4PKVT@976|Bacteroidetes,2FNE3@200643|Bacteroidia,4AMFP@815|Bacteroidaceae	976|Bacteroidetes	P	ABC transporter, permease protein	ydcV	-	-	ko:K11070	ko02010,map02010	M00299	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.11.1	-	-	BPD_transp_1
BYD3_k127_9055995_2	411477.PARMER_02412	1.011e-170	546.0	COG0687@1|root,COG0687@2|Bacteria,4NHNY@976|Bacteroidetes,2FNDI@200643|Bacteroidia,22ZDA@171551|Porphyromonadaceae	976|Bacteroidetes	P	Bacterial extracellular solute-binding protein	potD	-	-	ko:K11069	ko02010,map02010	M00299	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.11.1	-	-	SBP_bac_8
BYD3_k127_9055995_5	468059.AUHA01000002_gene1152	1.286e-88	307.0	COG1086@1|root,COG1086@2|Bacteria,4NERY@976|Bacteroidetes,1IPH4@117747|Sphingobacteriia	976|Bacteroidetes	GM	Polysaccharide biosynthesis protein	cap5D	-	-	-	-	-	-	-	-	-	-	-	CoA_binding_3,Polysacc_synt_2
BYD3_k127_9068785_3	1237149.C900_03124	8.649e-53	195.0	COG0760@1|root,COG0760@2|Bacteria,4NG2P@976|Bacteroidetes,47NE3@768503|Cytophagia	976|Bacteroidetes	O	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation	-	-	-	-	-	-	-	-	-	-	-	-	Rotamase_2
BYD3_k127_9068785_1	1168034.FH5T_00405	7.017e-106	359.0	COG0760@1|root,COG0760@2|Bacteria,4NEW0@976|Bacteroidetes,2FMDU@200643|Bacteroidia	976|Bacteroidetes	M	peptidylprolyl isomerase	surA	-	5.2.1.8	ko:K03771	-	-	-	-	ko00000,ko01000,ko03110	-	-	-	Rotamase,SurA_N_3
BYD3_k127_9068785_0	1408473.JHXO01000005_gene1645	2.264e-125	417.0	COG1934@1|root,COG1934@2|Bacteria,4PKT4@976|Bacteroidetes,2G3HG@200643|Bacteroidia	976|Bacteroidetes	S	OstA-like protein	-	-	-	-	-	-	-	-	-	-	-	-	OstA_2
BYD3_k127_9068785_4	385682.AFSL01000006_gene2361	4.757e-41	151.0	2C8VT@1|root,32RN1@2|Bacteria,4NS78@976|Bacteroidetes,2FTSK@200643|Bacteroidia,3XKB9@558415|Marinilabiliaceae	976|Bacteroidetes	S	Protein of unknown function (DUF2795)	-	-	-	-	-	-	-	-	-	-	-	-	DUF2795
BYD3_k127_9068785_2	1416760.AYMS01000012_gene963	8.089e-53	191.0	COG2096@1|root,COG2096@2|Bacteria,4NFHQ@976|Bacteroidetes,1HX1J@117743|Flavobacteriia,47HUN@76831|Myroides	976|Bacteroidetes	S	Cobalamin adenosyltransferase	yvqK	-	2.5.1.17	ko:K00798	ko00860,ko01100,map00860,map01100	M00122	R01492,R05220,R07268	RC00533	ko00000,ko00001,ko00002,ko01000	-	-	-	Cob_adeno_trans
BYD3_k127_9068785_5	886379.AEWI01000053_gene2680	5.747e-15	79.0	COG4206@1|root,COG4206@2|Bacteria,4NGYD@976|Bacteroidetes,2FNFI@200643|Bacteroidia	976|Bacteroidetes	H	Psort location OuterMembrane, score	-	-	-	-	-	-	-	-	-	-	-	-	TonB_dep_Rec
BYD3_k127_9078518_5	929556.Solca_0561	1.616e-34	134.0	COG0020@1|root,COG0020@2|Bacteria,4NF2B@976|Bacteroidetes,1IPRJ@117747|Sphingobacteriia	976|Bacteroidetes	I	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids	uppS	GO:0002094,GO:0003674,GO:0003824,GO:0004659,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006066,GO:0006629,GO:0006720,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0009058,GO:0009987,GO:0016093,GO:0016094,GO:0016740,GO:0016765,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046165,GO:0071704,GO:1901576,GO:1901615,GO:1901617	2.5.1.31	ko:K00806	ko00900,ko01110,map00900,map01110	-	R06447	RC00279,RC02839	ko00000,ko00001,ko01000,ko01006	-	-	-	Prenyltransf
BYD3_k127_9078518_0	886379.AEWI01000078_gene1981	1.155e-253	809.0	COG4775@1|root,COG4775@2|Bacteria,4NE6Z@976|Bacteroidetes,2FM76@200643|Bacteroidia,3XJIC@558415|Marinilabiliaceae	976|Bacteroidetes	M	Surface antigen variable number repeat	yaeT	-	-	ko:K07277	-	-	-	-	ko00000,ko02000,ko03029	1.B.33	-	-	Bac_surface_Ag,POTRA
BYD3_k127_9078518_3	1408473.JHXO01000004_gene153	9.171e-59	209.0	COG2825@1|root,COG2825@2|Bacteria,4NH46@976|Bacteroidetes,2FQDW@200643|Bacteroidia	976|Bacteroidetes	M	membrane	ompH	-	-	ko:K06142	-	-	-	-	ko00000	-	-	-	OmpH
BYD3_k127_9078518_7	709991.Odosp_2149	7.776e-25	110.0	COG2825@1|root,COG2825@2|Bacteria,4NSCM@976|Bacteroidetes,2FU10@200643|Bacteroidia,231DT@171551|Porphyromonadaceae	976|Bacteroidetes	M	Outer membrane protein (OmpH-like)	ompH	-	-	ko:K06142	-	-	-	-	ko00000	-	-	-	OmpH
BYD3_k127_9078518_2	468059.AUHA01000006_gene2900	1.027e-93	314.0	COG0796@1|root,COG0796@2|Bacteria,4NG1C@976|Bacteroidetes,1IVC4@117747|Sphingobacteriia	976|Bacteroidetes	M	Asp/Glu/Hydantoin racemase	murI	-	5.1.1.3	ko:K01776	ko00471,ko01100,map00471,map01100	-	R00260	RC00302	ko00000,ko00001,ko01000,ko01011	-	-	-	Asp_Glu_race
BYD3_k127_9078518_6	1121373.KB903621_gene1830	1.296e-27	119.0	COG1595@1|root,COG1595@2|Bacteria,4NNBY@976|Bacteroidetes,47PH5@768503|Cytophagia	976|Bacteroidetes	K	RNA polymerase sigma factor, sigma-70 family	-	-	-	ko:K03088	-	-	-	-	ko00000,ko03021	-	-	-	Sigma70_r2,Sigma70_r4_2
BYD3_k127_9078518_4	435590.BVU_2028	4.8e-44	175.0	COG3712@1|root,COG3712@2|Bacteria,4NKN5@976|Bacteroidetes,2FQIS@200643|Bacteroidia,4ANPA@815|Bacteroidaceae	976|Bacteroidetes	PT	Sigma factor regulatory protein, FecR PupR family	-	-	-	-	-	-	-	-	-	-	-	-	DUF4974,FecR
BYD3_k127_9078518_1	1492737.FEM08_34930	4.131e-200	663.0	COG1629@1|root,COG4771@2|Bacteria,4P1Z5@976|Bacteroidetes,1I04A@117743|Flavobacteriia,2NSEY@237|Flavobacterium	976|Bacteroidetes	P	TonB-dependent receptor	-	-	-	-	-	-	-	-	-	-	-	-	CarbopepD_reg_2,Plug,TonB_dep_Rec
BYD3_k127_9082587_8	679935.Alfi_1659	5.218e-43	167.0	COG4585@1|root,COG4585@2|Bacteria,4NI65@976|Bacteroidetes,2FRZ7@200643|Bacteroidia,22UEE@171550|Rikenellaceae	976|Bacteroidetes	T	histidine kinase DNA gyrase B	-	-	-	-	-	-	-	-	-	-	-	-	HATPase_c,HisKA_3,TPR_12,TPR_8
BYD3_k127_9082587_5	742817.HMPREF9449_01663	5.227e-63	222.0	COG2197@1|root,COG2197@2|Bacteria,4NKAD@976|Bacteroidetes,2FSDF@200643|Bacteroidia,22Y9Y@171551|Porphyromonadaceae	976|Bacteroidetes	K	COGs COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain	-	-	-	-	-	-	-	-	-	-	-	-	GerE,Response_reg
BYD3_k127_9082587_1	153721.MYP_4888	1.795e-140	469.0	COG0643@1|root,COG0643@2|Bacteria,4NG31@976|Bacteroidetes,47MM7@768503|Cytophagia	976|Bacteroidetes	NT	Signal transducing histidine kinase, homodimeric domain	cheA	-	2.7.13.3	ko:K03407	ko02020,ko02030,map02020,map02030	M00506	-	-	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022,ko02035	-	-	-	CheW,H-kinase_dim,HATPase_c,Hpt
BYD3_k127_9082587_9	153721.MYP_4869	3.9e-34	136.0	COG0835@1|root,COG0835@2|Bacteria,4NTK7@976|Bacteroidetes,47X59@768503|Cytophagia	976|Bacteroidetes	NT	Two component signalling adaptor domain	cheW	-	-	ko:K03408	ko02020,ko02030,map02020,map02030	-	-	-	ko00000,ko00001,ko02035	-	-	-	CheW
BYD3_k127_9082587_6	443144.GM21_1278	5.741e-52	190.0	COG1352@1|root,COG1352@2|Bacteria,1RIR8@1224|Proteobacteria,42TCC@68525|delta/epsilon subdivisions,2WPR8@28221|Deltaproteobacteria	28221|Deltaproteobacteria	NT	PFAM MCP methyltransferase, CheR-type	-	-	2.1.1.80	ko:K00575	ko02020,ko02030,map02020,map02030	-	-	-	ko00000,ko00001,ko01000,ko02035	-	-	-	CheR
BYD3_k127_9082587_7	1304885.AUEY01000001_gene3158	1.526e-45	171.0	COG0491@1|root,COG0491@2|Bacteria,1NX55@1224|Proteobacteria,430IJ@68525|delta/epsilon subdivisions,2WVK3@28221|Deltaproteobacteria	28221|Deltaproteobacteria	S	Metallo-beta-lactamase superfamily	-	-	-	-	-	-	-	-	-	-	-	-	Lactamase_B
BYD3_k127_9082587_3	1304885.AUEY01000001_gene3161	1.478e-85	299.0	COG0840@1|root,COG0840@2|Bacteria,1MU9B@1224|Proteobacteria,42KZR@68525|delta/epsilon subdivisions,2WJ2T@28221|Deltaproteobacteria,2MIVQ@213118|Desulfobacterales	28221|Deltaproteobacteria	NT	histidine kinase HAMP region domain protein	-	-	-	ko:K03406	ko02020,ko02030,map02020,map02030	-	-	-	ko00000,ko00001,ko02035	-	-	-	4HB_MCP_1,HAMP,MCPsignal
BYD3_k127_9082587_0	1304885.AUEY01000001_gene3161	8.601e-190	614.0	COG0840@1|root,COG0840@2|Bacteria,1MU9B@1224|Proteobacteria,42KZR@68525|delta/epsilon subdivisions,2WJ2T@28221|Deltaproteobacteria,2MIVQ@213118|Desulfobacterales	28221|Deltaproteobacteria	NT	histidine kinase HAMP region domain protein	-	-	-	ko:K03406	ko02020,ko02030,map02020,map02030	-	-	-	ko00000,ko00001,ko02035	-	-	-	4HB_MCP_1,HAMP,MCPsignal
BYD3_k127_9082587_2	1158294.JOMI01000001_gene1635	3.282e-100	334.0	COG0613@1|root,COG0613@2|Bacteria,4NX7H@976|Bacteroidetes,2FXF7@200643|Bacteroidia	976|Bacteroidetes	S	DNA polymerase alpha chain like domain	-	-	3.1.3.97	ko:K07053	-	-	R00188,R11188	RC00078	ko00000,ko01000	-	-	-	PHP
BYD3_k127_9082587_4	1121904.ARBP01000015_gene166	1.488e-72	249.0	COG0740@1|root,COG0740@2|Bacteria,4NE20@976|Bacteroidetes,47K60@768503|Cytophagia	976|Bacteroidetes	OU	Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins	-	-	-	-	-	-	-	-	-	-	-	-	CLP_protease
BYD3_k127_9086460_3	1499967.BAYZ01000076_gene753	2.03e-16	82.0	COG0412@1|root,COG0412@2|Bacteria,2NPZG@2323|unclassified Bacteria	2|Bacteria	Q	Dienelactone hydrolase family	dlhH	-	3.1.1.45	ko:K01061	ko00361,ko00364,ko00623,ko01100,ko01110,ko01120,ko01130,map00361,map00364,map00623,map01100,map01110,map01120,map01130	-	R03893,R05510,R05511,R06835,R06838,R08120,R08121,R09136,R09220,R09222	RC01018,RC01906,RC01907,RC02441,RC02467,RC02468,RC02674,RC02675,RC02686	ko00000,ko00001,ko01000	-	-	-	DLH
BYD3_k127_9086460_2	1408473.JHXO01000011_gene2960	8.064e-106	357.0	COG0577@1|root,COG0577@2|Bacteria,4NECN@976|Bacteroidetes,2FX5C@200643|Bacteroidia	976|Bacteroidetes	V	MacB-like periplasmic core domain	-	-	-	ko:K02004	-	M00258	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	FtsX,MacB_PCD
BYD3_k127_9086460_0	457424.BFAG_04751	3.711e-213	673.0	COG0138@1|root,COG0138@2|Bacteria,4NEZD@976|Bacteroidetes,2FN3G@200643|Bacteroidia,4AK6B@815|Bacteroidaceae	976|Bacteroidetes	F	bifunctional purine biosynthesis protein PurH	purH	-	2.1.2.3,3.5.4.10	ko:K00602	ko00230,ko00670,ko01100,ko01110,ko01130,ko01523,map00230,map00670,map01100,map01110,map01130,map01523	M00048	R01127,R04560	RC00026,RC00263,RC00456	ko00000,ko00001,ko00002,ko01000,ko04147	-	-	-	AICARFT_IMPCHas,MGS
BYD3_k127_9086460_1	1168034.FH5T_11545	2.292e-112	365.0	COG1077@1|root,COG1077@2|Bacteria,4NETQ@976|Bacteroidetes,2FM2I@200643|Bacteroidia	976|Bacteroidetes	D	Cell shape determining protein, MreB Mrl family	mreB	-	-	ko:K03569	-	-	-	-	ko00000,ko02048,ko03036,ko04812	1.A.33.1,9.B.157.1	-	-	MreB_Mbl
BYD3_k127_9088414_0	694427.Palpr_2667	2.617e-221	700.0	COG0642@1|root,COG2205@2|Bacteria,4NEZM@976|Bacteroidetes,2FN1Z@200643|Bacteroidia,22X0P@171551|Porphyromonadaceae	976|Bacteroidetes	T	Osmosensitive K+ channel His kinase sensor domain	-	-	2.7.13.3	ko:K07646	ko02020,map02020	M00454	-	-	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	-	-	-	DUF4118,HATPase_c,HisKA,KdpD
BYD3_k127_9088414_1	742767.HMPREF9456_02771	5.891e-97	321.0	COG0745@1|root,COG0745@2|Bacteria,4NIQC@976|Bacteroidetes,2G2Z1@200643|Bacteroidia,22ZCV@171551|Porphyromonadaceae	976|Bacteroidetes	K	COGs COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain	-	-	-	ko:K07667	ko02020,ko02024,map02020,map02024	M00454	-	-	ko00000,ko00001,ko00002,ko02022	-	-	-	Response_reg,Trans_reg_C
BYD3_k127_9088414_2	1123008.KB905704_gene502	1.269e-85	290.0	COG1253@1|root,COG1253@2|Bacteria,4NE9R@976|Bacteroidetes,2FN9R@200643|Bacteroidia,22W70@171551|Porphyromonadaceae	976|Bacteroidetes	P	Transporter associated domain	corC_1	-	-	ko:K03699	-	-	-	-	ko00000,ko02042	-	-	-	CBS,CorC_HlyC,DUF21
BYD3_k127_922326_3	1202532.FF52_21132	9.129e-08	55.0	2DH3E@1|root,2ZY91@2|Bacteria,4PCT3@976|Bacteroidetes,1IN5Q@117743|Flavobacteriia,2NXXT@237|Flavobacterium	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_922326_2	1122605.KB893638_gene3459	7.541e-30	125.0	2CAP7@1|root,33DEX@2|Bacteria,4NZ17@976|Bacteroidetes,1IZE5@117747|Sphingobacteriia	976|Bacteroidetes	S	Domain of unknown function (DUF1772)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1772
BYD3_k127_922326_1	1197477.IA57_00565	4.555e-115	382.0	COG2133@1|root,COG2133@2|Bacteria,4NF0B@976|Bacteroidetes,1HX9D@117743|Flavobacteriia	976|Bacteroidetes	G	Glucose / Sorbosone dehydrogenase	-	-	-	-	-	-	-	-	-	-	-	-	CBM_6,GSDH
BYD3_k127_922326_0	1185876.BN8_06488	2.55e-164	526.0	COG0673@1|root,COG0673@2|Bacteria,4NENY@976|Bacteroidetes	976|Bacteroidetes	S	Oxidoreductase family, NAD-binding Rossmann fold	-	-	-	-	-	-	-	-	-	-	-	-	GFO_IDH_MocA
BYD3_k127_929306_13	1168034.FH5T_12215	4.183e-22	97.0	COG0404@1|root,COG0404@2|Bacteria,4NF7S@976|Bacteroidetes,2FPDM@200643|Bacteroidia	976|Bacteroidetes	E	The glycine cleavage system catalyzes the degradation of glycine	gcvT	-	2.1.2.10	ko:K00605	ko00260,ko00630,ko00670,ko01100,ko01110,ko01130,ko01200,map00260,map00630,map00670,map01100,map01110,map01130,map01200	M00532	R01221,R02300,R04125	RC00022,RC00069,RC00183,RC02834	ko00000,ko00001,ko00002,ko01000	-	-	-	GCV_T,GCV_T_C
BYD3_k127_929306_15	1408473.JHXO01000004_gene141	9.566e-18	87.0	COG2198@1|root,COG2198@2|Bacteria,4NZRF@976|Bacteroidetes,2FZRE@200643|Bacteroidia	976|Bacteroidetes	T	Histidine kinase	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_929306_14	742817.HMPREF9449_01831	7.719e-21	95.0	COG1366@1|root,COG1366@2|Bacteria,4NY11@976|Bacteroidetes,2FW43@200643|Bacteroidia,230TZ@171551|Porphyromonadaceae	976|Bacteroidetes	T	STAS domain	-	-	-	ko:K04749	-	-	-	-	ko00000,ko03021	-	-	-	STAS
BYD3_k127_929306_0	709991.Odosp_2190	0.0	1190.0	COG0542@1|root,COG0542@2|Bacteria,4NGEM@976|Bacteroidetes,2FM5N@200643|Bacteroidia,22WE7@171551|Porphyromonadaceae	976|Bacteroidetes	O	Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE	clpB	-	-	ko:K03695	ko04213,map04213	-	-	-	ko00000,ko00001,ko03110	-	-	-	AAA,AAA_2,ClpB_D2-small,Clp_N
BYD3_k127_929306_2	1408433.JHXV01000017_gene1629	5.939e-303	959.0	COG0842@1|root,COG1131@1|root,COG0842@2|Bacteria,COG1131@2|Bacteria,4NHPD@976|Bacteroidetes,1I942@117743|Flavobacteriia,2PBH5@246874|Cryomorphaceae	976|Bacteroidetes	V	ABC-2 type transporter	-	-	-	-	-	-	-	-	-	-	-	-	ABC2_membrane,ABC_tran
BYD3_k127_929306_8	385682.AFSL01000003_gene1912	1.234e-53	191.0	2AD7J@1|root,312WH@2|Bacteria,4NR1A@976|Bacteroidetes,2G24U@200643|Bacteroidia,3XK3Q@558415|Marinilabiliaceae	976|Bacteroidetes	S	Domain of unknown function (DUF1987)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1987
BYD3_k127_929306_10	927658.AJUM01000047_gene2815	5.076e-48	178.0	2AAU0@1|root,334ZF@2|Bacteria,4NWCB@976|Bacteroidetes,2G23Y@200643|Bacteroidia,3XJI4@558415|Marinilabiliaceae	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_929306_6	1408473.JHXO01000011_gene3225	5.796e-107	358.0	COG0116@1|root,COG0116@2|Bacteria,4NFJM@976|Bacteroidetes,2FMNN@200643|Bacteroidia	976|Bacteroidetes	L	Belongs to the methyltransferase superfamily	rlmL	-	-	ko:K07444	-	-	-	-	ko00000,ko01000	-	-	-	THUMP,UPF0020
BYD3_k127_929306_9	1408473.JHXO01000011_gene3222	2.532e-52	189.0	COG3172@1|root,COG3172@2|Bacteria,4NFNZ@976|Bacteroidetes,2FUC4@200643|Bacteroidia	976|Bacteroidetes	H	AAA domain	nadR	-	-	-	-	-	-	-	-	-	-	-	AAA_28
BYD3_k127_929306_11	1408473.JHXO01000011_gene3221	1.141e-45	172.0	COG3201@1|root,COG3201@2|Bacteria,4NFJI@976|Bacteroidetes,2FRYG@200643|Bacteroidia	976|Bacteroidetes	H	nicotinamide mononucleotide transporter	pnuC	-	-	ko:K03811	-	-	-	-	ko00000,ko02000	4.B.1.1	-	-	NMN_transporter
BYD3_k127_929306_4	1168034.FH5T_17700	2.435e-174	562.0	COG0793@1|root,COG0793@2|Bacteria,4NEGV@976|Bacteroidetes,2FN98@200643|Bacteroidia	976|Bacteroidetes	M	Belongs to the peptidase S41A family	ctpA	-	3.4.21.102	ko:K03797	-	-	-	-	ko00000,ko01000,ko01002	-	-	-	PDZ_2,Peptidase_S41
BYD3_k127_929306_3	869213.JCM21142_72766	1.602e-255	796.0	COG0519@1|root,COG0519@2|Bacteria,4NESX@976|Bacteroidetes,47JG6@768503|Cytophagia	976|Bacteroidetes	F	Catalyzes the synthesis of GMP from XMP	guaA	GO:0003674,GO:0003824,GO:0003921,GO:0003922,GO:0006139,GO:0006163,GO:0006164,GO:0006177,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009163,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0016884,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034404,GO:0034641,GO:0034654,GO:0042278,GO:0042451,GO:0042455,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046037,GO:0046128,GO:0046129,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901068,GO:1901070,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659	6.3.5.2	ko:K01951	ko00230,ko00983,ko01100,map00230,map00983,map01100	M00050	R01230,R01231,R08244	RC00010,RC00204	ko00000,ko00001,ko00002,ko01000,ko01002	-	-	-	GATase,GMP_synt_C,NAD_synthase
BYD3_k127_929306_7	927658.AJUM01000047_gene2809	4.733e-91	309.0	COG1234@1|root,COG1234@2|Bacteria,4NE1K@976|Bacteroidetes,2FM13@200643|Bacteroidia,3XJ8B@558415|Marinilabiliaceae	976|Bacteroidetes	S	Beta-lactamase superfamily domain	rnz	GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004540,GO:0006139,GO:0006396,GO:0006399,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0031123,GO:0034414,GO:0034470,GO:0034641,GO:0034660,GO:0042779,GO:0042780,GO:0042781,GO:0043170,GO:0043628,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0140098,GO:1901360,GO:1905267	3.1.26.11	ko:K00784	ko03013,map03013	-	-	-	ko00000,ko00001,ko01000,ko03016	-	-	-	Lactamase_B_2
BYD3_k127_929306_12	869213.JCM21142_72764	2.068e-44	166.0	COG1366@1|root,COG1366@2|Bacteria,4NTAB@976|Bacteroidetes	976|Bacteroidetes	T	STAS domain	-	-	-	-	-	-	-	-	-	-	-	-	STAS,STAS_2
BYD3_k127_929306_1	886379.AEWI01000029_gene214	7.458e-317	980.0	COG0539@1|root,COG0539@2|Bacteria,4NDW9@976|Bacteroidetes,2FNZK@200643|Bacteroidia,3XJ00@558415|Marinilabiliaceae	976|Bacteroidetes	J	Ribosomal protein S1-like RNA-binding domain	rpsA	-	-	ko:K02945	ko03010,map03010	M00178	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	S1
BYD3_k127_929306_5	927658.AJUM01000047_gene2806	7.307e-132	425.0	COG1004@1|root,COG1004@2|Bacteria,4NE00@976|Bacteroidetes,2FMZ9@200643|Bacteroidia,3XJPW@558415|Marinilabiliaceae	976|Bacteroidetes	M	UDP binding domain	ugd	-	1.1.1.22	ko:K00012	ko00040,ko00053,ko00520,ko01100,map00040,map00053,map00520,map01100	M00014,M00129,M00361,M00362	R00286	RC00291	ko00000,ko00001,ko00002,ko01000	-	-	-	UDPG_MGDP_dh,UDPG_MGDP_dh_C,UDPG_MGDP_dh_N
BYD3_k127_946806_4	926549.KI421517_gene2436	1.632e-90	304.0	COG3279@1|root,COG3279@2|Bacteria,4NGBF@976|Bacteroidetes,47MTX@768503|Cytophagia	976|Bacteroidetes	KT	Response regulator of the LytR AlgR family	-	-	-	-	-	-	-	-	-	-	-	-	LytTR,Response_reg
BYD3_k127_946806_6	694427.Palpr_2736	2.8e-51	204.0	COG3275@1|root,COG3275@2|Bacteria,4PN8S@976|Bacteroidetes	976|Bacteroidetes	T	Histidine kinase	-	-	-	-	-	-	-	-	-	-	-	-	His_kinase
BYD3_k127_946806_2	926549.KI421517_gene1008	5.8e-206	666.0	COG1629@1|root,COG1629@2|Bacteria,4PKVH@976|Bacteroidetes,47K3W@768503|Cytophagia	976|Bacteroidetes	P	PFAM TonB-dependent Receptor Plug	-	-	-	-	-	-	-	-	-	-	-	-	CarbopepD_reg_2,CarboxypepD_reg,Plug
BYD3_k127_946806_3	1086011.HJ01_01869	2.212e-110	364.0	COG0668@1|root,COG0668@2|Bacteria,4NH7C@976|Bacteroidetes,1ICX5@117743|Flavobacteriia,2NVTM@237|Flavobacterium	976|Bacteroidetes	M	Mechanosensitive ion channel	-	-	-	ko:K22044	-	-	-	-	ko00000,ko02000	1.A.23.3	-	-	MS_channel
BYD3_k127_946806_1	1121481.AUAS01000015_gene2183	7.627e-226	722.0	COG0380@1|root,COG1877@1|root,COG0380@2|Bacteria,COG1877@2|Bacteria,4NGJ4@976|Bacteroidetes,47KIQ@768503|Cytophagia	976|Bacteroidetes	G	Trehalose-phosphatase	otsA	-	2.4.1.15,3.1.3.12	ko:K16055	ko00500,ko01100,map00500,map01100	-	R02737,R02778	RC00005,RC00017,RC00049,RC02748	ko00000,ko00001,ko01000,ko01003	-	GT20	-	Glyco_transf_20,Trehalose_PPase
BYD3_k127_946806_5	1131812.JQMS01000001_gene941	1.146e-63	227.0	2CJWE@1|root,30Y1E@2|Bacteria,4NNQQ@976|Bacteroidetes,1I40A@117743|Flavobacteriia,2NYX7@237|Flavobacterium	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_946806_0	509635.N824_29385	1.005e-227	720.0	COG2936@1|root,COG2936@2|Bacteria,4NFFB@976|Bacteroidetes,1IPID@117747|Sphingobacteriia	976|Bacteroidetes	S	PFAM X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain	-	-	-	ko:K06978	-	-	-	-	ko00000	-	-	-	PepX_C,Peptidase_S15
BYD3_k127_955280_0	1168289.AJKI01000056_gene3050	8.81e-218	707.0	COG0457@1|root,COG1729@1|root,COG0457@2|Bacteria,COG1729@2|Bacteria,4NE4W@976|Bacteroidetes,2FM3C@200643|Bacteroidia,3XJUZ@558415|Marinilabiliaceae	976|Bacteroidetes	S	Outer membrane lipoprotein	-	-	-	-	-	-	-	-	-	-	-	-	TPR_16,TPR_2,TPR_21,TPR_6,TPR_8
BYD3_k127_955280_3	926562.Oweho_0161	2.129e-88	297.0	COG2884@1|root,COG2884@2|Bacteria,4NEP2@976|Bacteroidetes,1HY06@117743|Flavobacteriia,2PAPT@246874|Cryomorphaceae	976|Bacteroidetes	D	ATPases associated with a variety of cellular activities	ftsE	-	-	ko:K09812	ko02010,map02010	M00256	-	-	ko00000,ko00001,ko00002,ko02000,ko03036	3.A.1.140	-	-	ABC_tran
BYD3_k127_955280_8	1408433.JHXV01000012_gene3883	1.553e-56	207.0	COG4122@1|root,COG4122@2|Bacteria,4NPJQ@976|Bacteroidetes,1I85I@117743|Flavobacteriia	976|Bacteroidetes	S	Methyltransferase domain	-	-	-	-	-	-	-	-	-	-	-	-	Methyltransf_24
BYD3_k127_955280_6	1349785.BAUG01000009_gene743	3.745e-63	231.0	COG0438@1|root,COG0438@2|Bacteria,4PI54@976|Bacteroidetes,1I2FR@117743|Flavobacteriia	976|Bacteroidetes	M	Glycosyltransferase Family 4	-	-	-	-	-	-	-	-	-	-	-	-	Glyco_trans_4_4,Glyco_transf_4,Glycos_transf_1
BYD3_k127_955280_2	1296415.JACC01000001_gene3563	3.727e-93	321.0	COG1470@1|root,COG1470@2|Bacteria,4NGFF@976|Bacteroidetes,1HZZG@117743|Flavobacteriia,2YIFR@290174|Aquimarina	976|Bacteroidetes	S	CarboxypepD_reg-like domain	-	-	-	-	-	-	-	-	-	-	-	-	CarbopepD_reg_2
BYD3_k127_955280_10	1268240.ATFI01000005_gene4715	2.564e-42	161.0	COG1595@1|root,COG1595@2|Bacteria,4NNBY@976|Bacteroidetes,2FNRK@200643|Bacteroidia,4AMRI@815|Bacteroidaceae	976|Bacteroidetes	K	RNA polymerase sigma-70 factor	-	-	-	ko:K03088	-	-	-	-	ko00000,ko03021	-	-	-	Sigma70_r2,Sigma70_r4_2
BYD3_k127_955280_11	700598.Niako_4596	3.958e-32	138.0	COG3712@1|root,COG3712@2|Bacteria,4NMA2@976|Bacteroidetes,1IS2K@117747|Sphingobacteriia	976|Bacteroidetes	PT	PFAM FecR protein	-	-	-	-	-	-	-	-	-	-	-	-	DUF4974,FecR
BYD3_k127_955280_5	742767.HMPREF9456_01453	2.32e-65	242.0	COG1470@1|root,COG1470@2|Bacteria,4NNH8@976|Bacteroidetes,2FP8N@200643|Bacteroidia,22XU4@171551|Porphyromonadaceae	976|Bacteroidetes	S	CarboxypepD_reg-like domain	-	-	-	-	-	-	-	-	-	-	-	-	CarbopepD_reg_2
BYD3_k127_955280_1	1168289.AJKI01000031_gene1096	2.178e-150	485.0	COG1092@1|root,COG1092@2|Bacteria,4NG9S@976|Bacteroidetes,2FN8H@200643|Bacteroidia,3XIK9@558415|Marinilabiliaceae	976|Bacteroidetes	J	S-adenosylmethionine-dependent methyltransferase	rlmI	-	2.1.1.191	ko:K06969	-	-	-	-	ko00000,ko01000,ko03009	-	-	-	Methyltrans_SAM
BYD3_k127_955280_9	862908.BMS_0944	1.737e-50	187.0	COG0349@1|root,COG0349@2|Bacteria,1REMB@1224|Proteobacteria,42S18@68525|delta/epsilon subdivisions,2WN9J@28221|Deltaproteobacteria	28221|Deltaproteobacteria	L	3'-5' exonuclease	-	-	-	-	-	-	-	-	-	-	-	-	DNA_pol_A_exo1
BYD3_k127_955280_13	1123008.KB905694_gene1516	3.274e-17	89.0	2AIA7@1|root,318R1@2|Bacteria,4NQPK@976|Bacteroidetes,2FPYF@200643|Bacteroidia,22Y48@171551|Porphyromonadaceae	976|Bacteroidetes	S	Domain of unknown function (DUF5063)	-	-	-	-	-	-	-	-	-	-	-	-	DUF5063
BYD3_k127_955280_12	984262.SGRA_2780	8.366e-26	111.0	COG4249@1|root,COG4642@1|root,COG4249@2|Bacteria,COG4642@2|Bacteria,4NJPY@976|Bacteroidetes,1J19S@117747|Sphingobacteriia	976|Bacteroidetes	S	Possible plasma membrane-binding motif in junctophilins, PIP-5-kinases and protein kinases.	-	-	-	-	-	-	-	-	-	-	-	-	MORN,Peptidase_C14,Peptidase_M48
BYD3_k127_955280_7	1168034.FH5T_04905	4.762e-59	216.0	COG5653@1|root,COG5653@2|Bacteria,4NQN5@976|Bacteroidetes,2FT4P@200643|Bacteroidia	976|Bacteroidetes	M	Protein involved in cellulose biosynthesis	-	-	-	-	-	-	-	-	-	-	-	-	Acetyltransf_6
BYD3_k127_955280_4	1408473.JHXO01000010_gene3652	8.092e-77	268.0	COG0726@1|root,COG0726@2|Bacteria,4NF79@976|Bacteroidetes,2FR2H@200643|Bacteroidia	976|Bacteroidetes	G	polysaccharide deacetylase	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_979641_5	42256.RradSPS_1173	5.172e-32	131.0	COG0500@1|root,COG0500@2|Bacteria,2HQ25@201174|Actinobacteria,4CRII@84995|Rubrobacteria	84995|Rubrobacteria	Q	Methyltransferase domain	-	-	-	-	-	-	-	-	-	-	-	-	Methyltransf_11
BYD3_k127_979641_3	1168034.FH5T_18690	4.49e-90	301.0	COG2120@1|root,COG2120@2|Bacteria,4NN16@976|Bacteroidetes,2FW3I@200643|Bacteroidia	976|Bacteroidetes	S	GlcNAc-PI de-N-acetylase	-	-	-	-	-	-	-	-	-	-	-	-	PIG-L
BYD3_k127_979641_1	1168034.FH5T_18695	1.982e-140	449.0	COG1208@1|root,COG1208@2|Bacteria,4NG3V@976|Bacteroidetes,2FMH2@200643|Bacteroidia	976|Bacteroidetes	JM	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits (eIF-2Bgamma eIF-2Bepsilon)	-	-	2.7.7.33	ko:K00978	ko00500,ko00520,ko01100,map00500,map00520,map01100	-	R00956	RC00002	ko00000,ko00001,ko01000	-	-	-	NTP_transferase
BYD3_k127_979641_2	111780.Sta7437_1478	3.127e-121	400.0	COG2227@1|root,COG2227@2|Bacteria,1G1XD@1117|Cyanobacteria,3VI2X@52604|Pleurocapsales	1117|Cyanobacteria	H	C-methyltransferase C-terminal domain	-	-	-	-	-	-	-	-	-	-	-	-	Methyltransf_14,Methyltransf_23
BYD3_k127_979641_4	1123368.AUIS01000027_gene1349	1.595e-67	233.0	COG1898@1|root,COG1898@2|Bacteria,1R9YD@1224|Proteobacteria,1S245@1236|Gammaproteobacteria,2NCIQ@225057|Acidithiobacillales	225057|Acidithiobacillales	G	Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4- hexulose	-	-	5.1.3.13	ko:K01790	ko00521,ko00523,ko01130,map00521,map00523,map01130	M00793	R06514	RC01531	ko00000,ko00001,ko00002,ko01000	-	-	-	dTDP_sugar_isom
BYD3_k127_979641_0	1116472.MGMO_204c00070	1.804e-145	468.0	COG0451@1|root,COG0451@2|Bacteria,1PB4Y@1224|Proteobacteria,1RZTV@1236|Gammaproteobacteria	1236|Gammaproteobacteria	M	epimerase dehydratase	-	-	-	-	-	-	-	-	-	-	-	-	Epimerase
BYD3_k127_979641_6	926559.JoomaDRAFT_1239	3.431e-28	123.0	COG2311@1|root,COG2311@2|Bacteria,4NG01@976|Bacteroidetes,1HZVC@117743|Flavobacteriia	976|Bacteroidetes	S	Protein of unknown function (DUF418)	-	-	-	ko:K07148	-	-	-	-	ko00000	-	-	-	DUF418
BYD3_k127_981147_2	1168289.AJKI01000002_gene2609	0.0	1052.0	COG1053@1|root,COG1053@2|Bacteria,4NFDU@976|Bacteroidetes,2FM67@200643|Bacteroidia,3XJBI@558415|Marinilabiliaceae	976|Bacteroidetes	C	Fumarate reductase flavoprotein C-term	sdhA	-	1.3.5.1,1.3.5.4	ko:K00239	ko00020,ko00190,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko05134,map00020,map00190,map00650,map00720,map01100,map01110,map01120,map01130,map01200,map05134	M00009,M00011,M00149,M00173,M00374,M00376	R02164	RC00045	ko00000,ko00001,ko00002,ko01000	-	-	-	FAD_binding_2,Succ_DH_flav_C
BYD3_k127_981147_5	1168034.FH5T_08635	2.398e-116	379.0	COG0479@1|root,COG0479@2|Bacteria,4NFR3@976|Bacteroidetes,2FP6Q@200643|Bacteroidia	976|Bacteroidetes	C	Succinate dehydrogenase Fumarate reductase	frdB	-	1.3.5.1,1.3.5.4	ko:K00240	ko00020,ko00190,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00190,map00650,map00720,map01100,map01110,map01120,map01130,map01200	M00009,M00011,M00149,M00173,M00374,M00376	R02164	RC00045	ko00000,ko00001,ko00002,ko01000	-	-	-	Fer2_3,Fer4_7,Fer4_8
BYD3_k127_981147_15	313606.M23134_00571	8.291e-22	102.0	2DBYH@1|root,2ZBV5@2|Bacteria,4NRR3@976|Bacteroidetes,47V9E@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_981147_7	700598.Niako_6050	1.023e-96	338.0	COG4288@1|root,COG4288@2|Bacteria,4NHM6@976|Bacteroidetes,1IPQ3@117747|Sphingobacteriia	976|Bacteroidetes	S	Lamin Tail Domain	-	-	-	-	-	-	-	-	-	-	-	-	Big_5,CHU_C,LTD
BYD3_k127_981147_4	1123248.KB893331_gene3805	7.817e-162	514.0	COG0136@1|root,COG0136@2|Bacteria,4NE4V@976|Bacteroidetes,1IQCT@117747|Sphingobacteriia	976|Bacteroidetes	E	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate	asd	-	1.2.1.11	ko:K00133	ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01210,map01230	M00016,M00017,M00018,M00033,M00525,M00526,M00527	R02291	RC00684	ko00000,ko00001,ko00002,ko01000	-	-	-	Semialdhyde_dh,Semialdhyde_dhC
BYD3_k127_981147_3	1408473.JHXO01000010_gene3677	4.217e-175	556.0	COG2262@1|root,COG2262@2|Bacteria,4NF0P@976|Bacteroidetes,2FM9T@200643|Bacteroidia	976|Bacteroidetes	S	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis	hflX	-	-	ko:K03665	-	-	-	-	ko00000,ko03009	-	-	-	GTP-bdg_M,GTP-bdg_N,MMR_HSR1
BYD3_k127_981147_6	1408473.JHXO01000006_gene1071	1.741e-113	379.0	COG0457@1|root,COG0457@2|Bacteria,4NF0N@976|Bacteroidetes	976|Bacteroidetes	S	Tetratricopeptide repeat	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_981147_16	756067.MicvaDRAFT_5426	2.465e-17	96.0	COG0457@1|root,COG4995@1|root,COG0457@2|Bacteria,COG4995@2|Bacteria,1G135@1117|Cyanobacteria,1H84Z@1150|Oscillatoriales	1117|Cyanobacteria	U	Tetratricopeptide repeat	-	-	-	-	-	-	-	-	-	-	-	-	CHAT,TPR_12,TPR_7
BYD3_k127_981147_10	1168034.FH5T_11815	1.613e-62	222.0	COG2865@1|root,COG2865@2|Bacteria,4NGPG@976|Bacteroidetes,2FMWB@200643|Bacteroidia	976|Bacteroidetes	K	Divergent AAA domain protein	-	-	-	-	-	-	-	-	-	-	-	-	AlbA_2
BYD3_k127_981147_11	1408473.JHXO01000009_gene3445	1.205e-50	186.0	COG3118@1|root,COG3118@2|Bacteria,4NQNX@976|Bacteroidetes,2FUHX@200643|Bacteroidia	976|Bacteroidetes	O	Thioredoxin	trxA2	-	-	-	-	-	-	-	-	-	-	-	Thioredoxin
BYD3_k127_981147_8	926556.Echvi_1134	1.591e-87	295.0	COG0861@1|root,COG0861@2|Bacteria,4NFFD@976|Bacteroidetes,47MB3@768503|Cytophagia	976|Bacteroidetes	P	PFAM Integral membrane protein TerC	-	-	-	-	-	-	-	-	-	-	-	-	TerC
BYD3_k127_981147_0	742725.HMPREF9450_02249	0.0	1473.0	COG0587@1|root,COG0587@2|Bacteria,4NFA0@976|Bacteroidetes,2FNND@200643|Bacteroidia,22UBQ@171550|Rikenellaceae	976|Bacteroidetes	L	DNA polymerase alpha chain like domain	dnaE	-	2.7.7.7	ko:K02337	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	M00260	R00375,R00376,R00377,R00378	RC02795	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	-	-	-	DNA_pol3_alpha,HHH_6,PHP,RNase_T,tRNA_anti-codon
BYD3_k127_981147_13	929556.Solca_0525	2.637e-47	171.0	COG3118@1|root,COG3118@2|Bacteria,4NQ5B@976|Bacteroidetes,1ISZS@117747|Sphingobacteriia	976|Bacteroidetes	O	Belongs to the thioredoxin family	trxA	-	-	ko:K03671	ko04621,ko05418,map04621,map05418	-	-	-	ko00000,ko00001,ko03110	-	-	-	Thioredoxin
BYD3_k127_981147_14	1408473.JHXO01000010_gene3692	7.722e-24	113.0	2EC3D@1|root,33629@2|Bacteria,4NXDF@976|Bacteroidetes	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_981147_17	869213.JCM21142_464	5.162e-12	72.0	2EFJ6@1|root,339BJ@2|Bacteria,4NUYU@976|Bacteroidetes	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_981147_9	886379.AEWI01000022_gene140	2.131e-80	277.0	29N3N@1|root,3091D@2|Bacteria,4NNZB@976|Bacteroidetes,2G1MK@200643|Bacteroidia,3XIS6@558415|Marinilabiliaceae	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_981147_1	385682.AFSL01000008_gene2589	0.0	1216.0	COG1131@1|root,COG1131@2|Bacteria,4NHPD@976|Bacteroidetes,2FRF1@200643|Bacteroidia,3XIPC@558415|Marinilabiliaceae	976|Bacteroidetes	V	Tellurite resistance protein TerB	-	-	-	ko:K21397	-	-	-	-	ko00000,ko02000	3.A.1	-	-	ABC2_membrane,ABC_tran,TerB
BYD3_k127_981147_12	385682.AFSL01000008_gene2588	3.892e-48	174.0	2CEYK@1|root,31W5M@2|Bacteria,4NQEQ@976|Bacteroidetes,2G265@200643|Bacteroidia,3XK2K@558415|Marinilabiliaceae	976|Bacteroidetes	S	Domain of unknown function (DUF1987)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1987
BYD3_k127_990130_4	1408473.JHXO01000007_gene758	3.683e-13	70.0	COG0546@1|root,COG0546@2|Bacteria,4NIJ1@976|Bacteroidetes,2G32Q@200643|Bacteroidia	976|Bacteroidetes	S	HAD hydrolase, family IA, variant	-	-	3.1.3.18	ko:K01091	ko00630,ko01100,ko01110,ko01130,map00630,map01100,map01110,map01130	-	R01334	RC00017	ko00000,ko00001,ko01000	-	-	-	HAD_2
BYD3_k127_990130_0	1168034.FH5T_05950	2.971e-258	818.0	COG2366@1|root,COG2366@2|Bacteria,4NEIX@976|Bacteroidetes	976|Bacteroidetes	S	PFAM peptidase S45 penicillin amidase	-	-	3.5.1.11	ko:K01434	ko00311,ko01130,map00311,map01130	-	R02170	RC00166,RC00328	ko00000,ko00001,ko01000,ko01002	-	-	-	Penicil_amidase
BYD3_k127_990130_1	1168034.FH5T_15170	2.116e-134	442.0	COG4775@1|root,COG4775@2|Bacteria,4NMIQ@976|Bacteroidetes,2FS3R@200643|Bacteroidia	976|Bacteroidetes	M	Surface antigen	-	-	-	-	-	-	-	-	-	-	-	-	Bac_surface_Ag
BYD3_k127_990130_3	1121104.AQXH01000001_gene1443	2.461e-28	117.0	COG0724@1|root,COG0724@2|Bacteria,4NV5J@976|Bacteroidetes	976|Bacteroidetes	S	RNA-binding protein	ykfA	-	-	-	-	-	-	-	-	-	-	-	RRM_1
BYD3_k127_990130_2	1168034.FH5T_12580	6.881e-47	184.0	COG2067@1|root,COG2067@2|Bacteria,4NKM1@976|Bacteroidetes,2FPD4@200643|Bacteroidia	976|Bacteroidetes	I	Psort location OuterMembrane, score	-	-	-	ko:K06076	-	-	-	-	ko00000,ko02000	1.B.9	-	-	OMP_b-brl
BYD3_k127_990381_13	1313421.JHBV01000030_gene2174	3.798e-23	116.0	COG0457@1|root,COG4249@1|root,COG0457@2|Bacteria,COG4249@2|Bacteria,4NSC3@976|Bacteroidetes,1IZ2M@117747|Sphingobacteriia	976|Bacteroidetes	M	Caspase domain	-	-	-	-	-	-	-	-	-	-	-	-	Peptidase_C14,TPR_2
BYD3_k127_990381_1	269798.CHU_3643	2.948e-275	859.0	COG1154@1|root,COG1154@2|Bacteria,4NDY5@976|Bacteroidetes,47JUB@768503|Cytophagia	976|Bacteroidetes	H	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)	dxs	-	2.2.1.7	ko:K01662	ko00730,ko00900,ko01100,ko01110,ko01130,map00730,map00900,map01100,map01110,map01130	M00096	R05636	RC00032	ko00000,ko00001,ko00002,ko01000	-	-	-	DXP_synthase_N,E1_dh,Transket_pyr,Transketolase_C
BYD3_k127_990381_9	869213.JCM21142_41444	3.401e-65	235.0	COG1360@1|root,COG1360@2|Bacteria,4NGHP@976|Bacteroidetes,47NTZ@768503|Cytophagia	976|Bacteroidetes	N	OmpA family	-	-	-	ko:K02557	ko02030,ko02040,map02030,map02040	-	-	-	ko00000,ko00001,ko02000,ko02035	1.A.30.1	-	-	OmpA
BYD3_k127_990381_8	385682.AFSL01000096_gene603	2.361e-65	228.0	COG0233@1|root,COG0233@2|Bacteria,4NF95@976|Bacteroidetes,2FPZE@200643|Bacteroidia,3XJMJ@558415|Marinilabiliaceae	976|Bacteroidetes	J	Ribosome recycling factor	frr	GO:0002181,GO:0002184,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006412,GO:0006415,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016043,GO:0019538,GO:0022411,GO:0032984,GO:0034641,GO:0034645,GO:0043021,GO:0043023,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043624,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044464,GO:0044877,GO:0071704,GO:0071840,GO:1901564,GO:1901566,GO:1901576	-	ko:K02838	-	-	-	-	ko00000,ko03012	-	-	-	RRF
BYD3_k127_990381_6	1235803.C825_01462	7.295e-96	319.0	COG0528@1|root,COG0528@2|Bacteria,4NE8Z@976|Bacteroidetes,2FMES@200643|Bacteroidia,22WRK@171551|Porphyromonadaceae	976|Bacteroidetes	F	Catalyzes the reversible phosphorylation of UMP to UDP	pyrH	-	2.7.4.22	ko:K09903	ko00240,ko01100,map00240,map01100	-	R00158	RC00002	ko00000,ko00001,ko01000	-	-	-	AA_kinase
BYD3_k127_990381_5	742817.HMPREF9449_02762	2.564e-104	345.0	COG0264@1|root,COG0264@2|Bacteria,4NF03@976|Bacteroidetes,2FNAD@200643|Bacteroidia,22W7D@171551|Porphyromonadaceae	976|Bacteroidetes	J	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome	tsf	GO:0003674,GO:0003676,GO:0003723,GO:0003746,GO:0005488,GO:0006412,GO:0006414,GO:0006518,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576	-	ko:K02357	-	-	-	-	ko00000,ko03012,ko03029	-	-	-	EF_TS
BYD3_k127_990381_3	927658.AJUM01000034_gene493	1.709e-111	367.0	COG0052@1|root,COG0052@2|Bacteria,4NER0@976|Bacteroidetes,2FM4T@200643|Bacteroidia,3XIMG@558415|Marinilabiliaceae	976|Bacteroidetes	J	Ribosomal protein S2	rpsB	GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904	-	ko:K02967	ko03010,map03010	M00178,M00179	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_S2
BYD3_k127_990381_12	1408473.JHXO01000001_gene1953	3.805e-50	181.0	COG0103@1|root,COG0103@2|Bacteria,4NNN1@976|Bacteroidetes,2FSGZ@200643|Bacteroidia	976|Bacteroidetes	J	Belongs to the universal ribosomal protein uS9 family	rpsI	GO:0000462,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006139,GO:0006364,GO:0006396,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016070,GO:0016072,GO:0019538,GO:0022613,GO:0022626,GO:0022627,GO:0030490,GO:0032991,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0042254,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904	-	ko:K02996	ko03010,map03010	M00178,M00179	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_S9
BYD3_k127_990381_7	880070.Cycma_2938	1.493e-67	232.0	COG0102@1|root,COG0102@2|Bacteria,4NNGA@976|Bacteroidetes,47PQ7@768503|Cytophagia	976|Bacteroidetes	J	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly	rplM	-	-	ko:K02871	ko03010,map03010	M00178,M00179	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_L13
BYD3_k127_990381_11	1168034.FH5T_14375	7.611e-60	228.0	COG3307@1|root,COG3307@2|Bacteria	2|Bacteria	M	-O-antigen	-	-	-	ko:K16705	-	-	-	-	ko00000	-	-	-	Wzy_C
BYD3_k127_990381_2	1123277.KB893180_gene2461	2.45e-164	524.0	COG3525@1|root,COG3525@2|Bacteria,4NGV2@976|Bacteroidetes,47TJT@768503|Cytophagia	976|Bacteroidetes	G	Glycosyl hydrolase family 20, catalytic domain	-	-	-	-	-	-	-	-	-	-	-	-	Glyco_hydro_20
BYD3_k127_990381_4	1121904.ARBP01000019_gene2785	1.113e-104	352.0	COG4299@1|root,COG4299@2|Bacteria,4NIQV@976|Bacteroidetes,47K6H@768503|Cytophagia	976|Bacteroidetes	S	Domain of unknown function (DUF5009)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1624,DUF5009
BYD3_k127_990381_0	1408473.JHXO01000010_gene3689	0.0	1143.0	COG0038@1|root,COG0038@2|Bacteria,4NZYS@976|Bacteroidetes,2G0DB@200643|Bacteroidia	976|Bacteroidetes	P	Protein of unknown function (DUF2723)	-	-	-	-	-	-	-	-	-	-	-	-	DUF2723
BYD3_k127_990381_10	1197477.IA57_03300	8.986e-64	225.0	COG0726@1|root,COG0726@2|Bacteria,4NM7D@976|Bacteroidetes,1I1F1@117743|Flavobacteriia	976|Bacteroidetes	G	polysaccharide deacetylase	pgdA_1	-	-	-	-	-	-	-	-	-	-	-	Polysacc_deac_1
BYD3_k127_991018_4	1168034.FH5T_17590	1.844e-33	133.0	COG0265@1|root,COG2234@1|root,COG0265@2|Bacteria,COG2234@2|Bacteria,4NFZR@976|Bacteroidetes,2G2QE@200643|Bacteroidia	976|Bacteroidetes	O	Psort location Extracellular, score	-	-	-	-	-	-	-	-	-	-	-	-	PD40,PDZ_2,Peptidase_M28
BYD3_k127_991018_2	880073.Calab_0191	4.348e-71	249.0	2AMSR@1|root,31CP7@2|Bacteria	2|Bacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_991018_3	743722.Sph21_0664	1.221e-41	162.0	COG2071@1|root,COG2071@2|Bacteria,4NNEJ@976|Bacteroidetes,1IS4X@117747|Sphingobacteriia	976|Bacteroidetes	S	Peptidase C26	-	-	-	ko:K07010	-	-	-	-	ko00000,ko01002	-	-	-	Peptidase_C26
BYD3_k127_991018_0	1408473.JHXO01000001_gene2528	9.297e-176	563.0	COG0044@1|root,COG0044@2|Bacteria,4NE3T@976|Bacteroidetes,2FN4X@200643|Bacteroidia	976|Bacteroidetes	F	Catalyzes the reversible hydrolysis of the amide bond within dihydroorotate. This metabolic intermediate is required for the biosynthesis of pyrimidine nucleotides	pyrC	-	3.5.2.3	ko:K01465	ko00240,ko01100,map00240,map01100	M00051	R01993	RC00632	ko00000,ko00001,ko00002,ko01000	-	-	-	Amidohydro_1
BYD3_k127_991018_1	1408813.AYMG01000039_gene2337	1.54e-111	364.0	COG0463@1|root,COG0463@2|Bacteria,4PM68@976|Bacteroidetes,1J0J4@117747|Sphingobacteriia	976|Bacteroidetes	M	Glycosyl transferase family 2	dpm1	-	2.4.1.83	ko:K00721	ko00510,ko01100,map00510,map01100	-	R01009	RC00005	ko00000,ko00001,ko01000,ko01003	-	GT2	-	Glycos_transf_2
BYD3_k127_991018_6	1392490.JHZX01000001_gene424	2.902e-10	61.0	2DRUD@1|root,33D3V@2|Bacteria,4NY0I@976|Bacteroidetes,1I6KN@117743|Flavobacteriia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_991018_7	1453505.JASY01000008_gene954	1.771e-06	49.0	2DRUD@1|root,33D3V@2|Bacteria,4NY0I@976|Bacteroidetes,1I6KN@117743|Flavobacteriia,2NY5F@237|Flavobacterium	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_991018_5	1121930.AQXG01000012_gene3179	1.289e-12	67.0	2EH3B@1|root,33AVB@2|Bacteria,4NXP5@976|Bacteroidetes,1IZKG@117747|Sphingobacteriia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BYD3_k127_993629_6	742767.HMPREF9456_02630	7.07e-66	236.0	COG1305@1|root,COG1305@2|Bacteria,4NEKT@976|Bacteroidetes,2FRIV@200643|Bacteroidia,22ZYH@171551|Porphyromonadaceae	976|Bacteroidetes	E	Domain of Unknown Function with PDB structure (DUF3857)	-	-	-	-	-	-	-	-	-	-	-	-	DUF3857,Transglut_core
BYD3_k127_993629_4	886379.AEWI01000208_gene2431	1.002e-97	325.0	COG1235@1|root,COG1235@2|Bacteria,4NDVI@976|Bacteroidetes,2FN8Y@200643|Bacteroidia,3XJIS@558415|Marinilabiliaceae	976|Bacteroidetes	S	Beta-lactamase superfamily domain	vicX	-	-	-	-	-	-	-	-	-	-	-	Lactamase_B,Lactamase_B_2
BYD3_k127_993629_2	927658.AJUM01000037_gene2372	9.699e-165	526.0	COG0436@1|root,COG0436@2|Bacteria,4NG6G@976|Bacteroidetes,2FN1B@200643|Bacteroidia,3XJVE@558415|Marinilabiliaceae	976|Bacteroidetes	E	Aminotransferase class I and II	aspC	-	2.6.1.1,2.6.1.2,2.6.1.66	ko:K00812,ko:K14260	ko00220,ko00250,ko00270,ko00290,ko00330,ko00350,ko00360,ko00400,ko00401,ko00950,ko00960,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map00250,map00270,map00290,map00330,map00350,map00360,map00400,map00401,map00950,map00960,map01100,map01110,map01130,map01210,map01230	-	R00258,R00355,R00694,R00734,R00896,R01215,R02433,R02619,R05052	RC00006,RC00008,RC00036	ko00000,ko00001,ko01000,ko01007	-	-	-	Aminotran_1_2
BYD3_k127_993629_12	926549.KI421517_gene3935	9.873e-25	109.0	2CG1Y@1|root,31NHZ@2|Bacteria,4NQ9Z@976|Bacteroidetes,47QC0@768503|Cytophagia	976|Bacteroidetes	S	Protein of unknown function (DUF1573)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1573
BYD3_k127_993629_0	1168034.FH5T_11085	0.0	1221.0	COG0525@1|root,COG0525@2|Bacteria,4NETB@976|Bacteroidetes,2FPJG@200643|Bacteroidia	976|Bacteroidetes	J	amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner	valS	GO:0003674,GO:0003824,GO:0004812,GO:0004832,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006438,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576	6.1.1.9	ko:K01873	ko00970,map00970	M00359,M00360	R03665	RC00055,RC00523	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	-	-	-	Anticodon_1,Val_tRNA-synt_C,tRNA-synt_1
BYD3_k127_993629_5	357808.RoseRS_0423	4.923e-66	231.0	COG0259@1|root,COG0259@2|Bacteria,2G8DA@200795|Chloroflexi,376ZA@32061|Chloroflexia	32061|Chloroflexia	H	Catalyzes the oxidation of either pyridoxine 5'- phosphate (PNP) or pyridoxamine 5'-phosphate (PMP) into pyridoxal 5'-phosphate (PLP)	-	-	1.4.3.5	ko:K00275	ko00750,ko01100,ko01120,map00750,map01100,map01120	M00124	R00277,R00278,R01710,R01711	RC00048,RC00116	ko00000,ko00001,ko00002,ko01000	-	-	-	PNP_phzG_C,Putative_PNPOx
BYD3_k127_993629_7	1408473.JHXO01000010_gene3577	4.511e-65	233.0	COG1295@1|root,COG1295@2|Bacteria,4NFY6@976|Bacteroidetes	976|Bacteroidetes	S	ribonuclease BN	yfkH	-	-	ko:K07058	-	-	-	-	ko00000	-	-	-	Virul_fac_BrkB
BYD3_k127_993629_3	1349822.NSB1T_11235	4.684e-119	389.0	COG0157@1|root,COG0157@2|Bacteria,4NDXF@976|Bacteroidetes,2FMJM@200643|Bacteroidia,22X4A@171551|Porphyromonadaceae	976|Bacteroidetes	H	Belongs to the NadC ModD family	nadC	-	2.4.2.19	ko:K00767	ko00760,ko01100,map00760,map01100	M00115	R03348	RC02877	ko00000,ko00001,ko00002,ko01000	-	-	-	QRPTase_C,QRPTase_N
BYD3_k127_993629_11	1408473.JHXO01000010_gene3578	1.43e-25	110.0	2E4AG@1|root,32Z66@2|Bacteria,4NUXA@976|Bacteroidetes,2FSMC@200643|Bacteroidia	976|Bacteroidetes	S	COG NOG32209 non supervised orthologous group	-	-	-	-	-	-	-	-	-	-	-	-	DUF4783
BYD3_k127_993629_9	1178825.ALIH01000012_gene1789	3.099e-48	177.0	COG1576@1|root,COG1576@2|Bacteria,4NMFP@976|Bacteroidetes,1I1AB@117743|Flavobacteriia	976|Bacteroidetes	J	Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA	rlmH	-	2.1.1.177	ko:K00783	-	-	-	-	ko00000,ko01000,ko03009	-	-	-	SPOUT_MTase
BYD3_k127_993629_1	1168034.FH5T_04685	6.693e-206	685.0	COG5000@1|root,COG5000@2|Bacteria,4NE49@976|Bacteroidetes,2FRVJ@200643|Bacteroidia	976|Bacteroidetes	T	COG5000 Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation	zraS_1	-	-	-	-	-	-	-	-	-	-	-	HATPase_c,HisKA
BYD3_k127_993629_10	1313421.JHBV01000013_gene3787	4.708e-38	165.0	COG2885@1|root,COG3210@1|root,COG4386@1|root,COG4447@1|root,COG4932@1|root,COG4935@1|root,COG5384@1|root,COG2885@2|Bacteria,COG3210@2|Bacteria,COG4386@2|Bacteria,COG4447@2|Bacteria,COG4932@2|Bacteria,COG4935@2|Bacteria,COG5384@2|Bacteria,4PPW2@976|Bacteroidetes,1J12N@117747|Sphingobacteriia	2|Bacteria	JMU	domain protein	-	-	-	ko:K13735,ko:K19360	ko05100,map05100	-	-	-	ko00000,ko00001,ko03036	-	-	-	CHU_C,DUF11,FIVAR,LRR_5
BYD3_k127_993629_8	926549.KI421517_gene1509	5.398e-53	213.0	COG3291@1|root,COG5184@1|root,COG3291@2|Bacteria,COG5184@2|Bacteria,4PKPC@976|Bacteroidetes,47N8S@768503|Cytophagia	976|Bacteroidetes	DZ	C-terminal domain of CHU protein family	-	-	-	-	-	-	-	-	-	-	-	-	CHU_C,RCC1
## 2539 queries scanned
## Total time (seconds): 6.377461194992065
## Rate: 398.12 q/s