## Mon Mar 17 03:11:23 2025
## emapper-2.1.9
## /home/zhangkaihang/.conda/envs/eggnog-mapper/bin/emapper.py -i /home/zhangkaihang/metadata_analysis/metawrap/paddysoil/4paddy/bin4gtdbtk/DYD3_bin.60.fa -m mmseqs --itype genome -o DYD3_bin.60 --output_dir /home/zhangkaihang/metadata_analysis/eggnog-mapper/paddysoil/4paddy/DYD3_bin.60 --cpu 8
##
#query	seed_ortholog	evalue	score	eggNOG_OGs	max_annot_lvl	COG_category	Description	Preferred_name	GOs	EC	KEGG_ko	KEGG_Pathway	KEGG_Module	KEGG_Reaction	KEGG_rclass	BRITE	KEGG_TC	CAZy	BiGG_Reaction	PFAMs
DYD3_k127_1031386_1	1353529.M899_2853	7.875e-168	540.0	COG2124@1|root,COG2124@2|Bacteria,1MV75@1224|Proteobacteria,42NH2@68525|delta/epsilon subdivisions,2WVDJ@28221|Deltaproteobacteria	28221|Deltaproteobacteria	C	Cytochrome P450	-	-	-	-	-	-	-	-	-	-	-	-	p450
DYD3_k127_1031386_2	1201288.M900_1393	1.375e-96	325.0	COG3239@1|root,COG3239@2|Bacteria,1P22S@1224|Proteobacteria,431FV@68525|delta/epsilon subdivisions,2WWG6@28221|Deltaproteobacteria	28221|Deltaproteobacteria	I	Fatty acid desaturase	-	-	-	-	-	-	-	-	-	-	-	-	FA_desaturase
DYD3_k127_1031386_5	1123401.JHYQ01000014_gene867	9.781e-11	71.0	COG3655@1|root,COG3655@2|Bacteria,1RBPK@1224|Proteobacteria,1S22Y@1236|Gammaproteobacteria	1236|Gammaproteobacteria	K	transcriptional regulators	-	-	-	-	-	-	-	-	-	-	-	-	HTH_26
DYD3_k127_1031386_0	388051.AUFE01000031_gene3560	1.699e-288	897.0	COG1574@1|root,COG1574@2|Bacteria,1MWP2@1224|Proteobacteria,2VIK2@28216|Betaproteobacteria,1K4R8@119060|Burkholderiaceae	28216|Betaproteobacteria	S	amidohydrolase	-	-	-	-	-	-	-	-	-	-	-	-	Amidohydro_3
DYD3_k127_1031386_4	1121287.AUMU01000025_gene2732	1.533e-26	117.0	COG3619@1|root,COG3619@2|Bacteria,4NMA4@976|Bacteroidetes,1I7YP@117743|Flavobacteriia,3ZPN7@59732|Chryseobacterium	976|Bacteroidetes	S	Protein of unknown function (DUF1275)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1275
DYD3_k127_1031386_3	314285.KT71_10657	1.054e-92	321.0	COG1502@1|root,COG1502@2|Bacteria,1MWUW@1224|Proteobacteria,1RPQG@1236|Gammaproteobacteria,1J4NK@118884|unclassified Gammaproteobacteria	1236|Gammaproteobacteria	I	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol	cls	-	-	ko:K06131	ko00564,ko01100,map00564,map01100	-	R07390	RC00017	ko00000,ko00001,ko01000	-	-	-	PLDc_2,PLDc_N
DYD3_k127_1037337_0	1201290.M902_0644	4.858e-86	292.0	COG0766@1|root,COG0766@2|Bacteria,1MUH7@1224|Proteobacteria,42MJT@68525|delta/epsilon subdivisions,2MSU6@213481|Bdellovibrionales,2WJ7W@28221|Deltaproteobacteria	213481|Bdellovibrionales	M	Belongs to the EPSP synthase family. MurA subfamily	murA	-	2.5.1.7	ko:K00790	ko00520,ko00550,ko01100,map00520,map00550,map01100	-	R00660	RC00350	ko00000,ko00001,ko01000,ko01011	-	-	-	EPSP_synthase
DYD3_k127_1037337_1	1353529.M899_2921	4.66e-48	183.0	COG2890@1|root,COG2890@2|Bacteria,1MXCQ@1224|Proteobacteria,42PKA@68525|delta/epsilon subdivisions,2MT9K@213481|Bdellovibrionales,2WM9R@28221|Deltaproteobacteria	213481|Bdellovibrionales	J	Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif	prmC	-	2.1.1.297	ko:K02493	-	-	R10806	RC00003,RC03279	ko00000,ko01000,ko03012	-	-	-	MTS,Methyltransf_25,Methyltransf_31
DYD3_k127_1037337_2	1353529.M899_2922	1.919e-39	148.0	COG0216@1|root,COG0216@2|Bacteria,1MV28@1224|Proteobacteria,42NA3@68525|delta/epsilon subdivisions,2MSSR@213481|Bdellovibrionales,2WIQU@28221|Deltaproteobacteria	213481|Bdellovibrionales	J	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA	prfA	-	-	ko:K02835	-	-	-	-	ko00000,ko03012	-	-	-	PCRF,RF-1
DYD3_k127_1039941_0	1449063.JMLS01000004_gene2513	7.808e-56	205.0	COG1092@1|root,COG1092@2|Bacteria,1TPUD@1239|Firmicutes,4HEUM@91061|Bacilli,26RBN@186822|Paenibacillaceae	91061|Bacilli	J	SAM-dependent methyltransferase	rumA1	-	2.1.1.191	ko:K06969	-	-	-	-	ko00000,ko01000,ko03009	-	-	-	Methyltrans_SAM
DYD3_k127_1052665_10	1353529.M899_1102	1.593e-64	226.0	COG2605@1|root,COG2605@2|Bacteria,1Q1GI@1224|Proteobacteria,42TJZ@68525|delta/epsilon subdivisions,2MT41@213481|Bdellovibrionales,2WQNP@28221|Deltaproteobacteria	213481|Bdellovibrionales	S	GHMP kinases N terminal domain	-	-	2.7.1.168	ko:K07031	ko00540,map00540	-	R09770	RC00002,RC00078	ko00000,ko00001,ko01000	-	-	-	GHMP_kinases_C,GHMP_kinases_N
DYD3_k127_1052665_6	862908.BMS_0716	6.086e-93	315.0	293AH@1|root,2ZQT7@2|Bacteria,1P4Z8@1224|Proteobacteria,4327G@68525|delta/epsilon subdivisions,2MTDD@213481|Bdellovibrionales,2WXCA@28221|Deltaproteobacteria	213481|Bdellovibrionales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	DUF429
DYD3_k127_1052665_7	313606.M23134_06177	2.095e-78	275.0	COG4320@1|root,COG4320@2|Bacteria,4P18K@976|Bacteroidetes	976|Bacteroidetes	S	Uncharacterized protein conserved in bacteria (DUF2252)	-	-	-	-	-	-	-	-	-	-	-	-	DUF2252
DYD3_k127_1052665_18	1121946.AUAX01000017_gene4995	2.399e-18	94.0	COG0730@1|root,COG0730@2|Bacteria,2I8CY@201174|Actinobacteria,4D9NT@85008|Micromonosporales	201174|Actinobacteria	S	Sulfite exporter TauE/SafE	-	-	-	ko:K07090	-	-	-	-	ko00000	-	-	-	TauE
DYD3_k127_1052665_21	264462.Bd3838	1.102e-05	52.0	COG4911@1|root,COG4911@2|Bacteria,1NPJ8@1224|Proteobacteria,437MG@68525|delta/epsilon subdivisions,2MU4P@213481|Bdellovibrionales,2X2VN@28221|Deltaproteobacteria	213481|Bdellovibrionales	S	Uncharacterized conserved protein (DUF2203)	-	-	-	-	-	-	-	-	-	-	-	-	DUF2203
DYD3_k127_1052665_14	1353529.M899_1099	2.444e-51	185.0	COG0691@1|root,COG0691@2|Bacteria,1RDFP@1224|Proteobacteria,42SJ8@68525|delta/epsilon subdivisions,2MT3C@213481|Bdellovibrionales,2WP5B@28221|Deltaproteobacteria	213481|Bdellovibrionales	J	Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene	smpB	-	-	ko:K03664	-	-	-	-	ko00000	-	-	-	SmpB
DYD3_k127_1052665_11	1184267.A11Q_1018	9.861e-61	227.0	COG1502@1|root,COG1502@2|Bacteria,1MUDJ@1224|Proteobacteria,42M77@68525|delta/epsilon subdivisions,2MTBA@213481|Bdellovibrionales,2WM41@28221|Deltaproteobacteria	213481|Bdellovibrionales	I	Phospholipase D. Active site motifs.	-	-	-	ko:K06132	ko00564,ko01100,map00564,map01100	-	R11062	RC00017	ko00000,ko00001,ko01000	-	-	-	PLDc_2
DYD3_k127_1052665_8	1201288.M900_0831	1.76e-67	238.0	COG0030@1|root,COG0030@2|Bacteria,1MVNU@1224|Proteobacteria,42QAC@68525|delta/epsilon subdivisions,2MTAG@213481|Bdellovibrionales,2WN8H@28221|Deltaproteobacteria	213481|Bdellovibrionales	J	Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits	ksgA	GO:0000154,GO:0000179,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016433,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360	2.1.1.182	ko:K02528	-	-	R10716	RC00003,RC03257	ko00000,ko01000,ko03009	-	-	-	RrnaAD
DYD3_k127_1052665_4	1201288.M900_0832	6.57e-119	392.0	COG0533@1|root,COG0533@2|Bacteria,1MU6S@1224|Proteobacteria,42MHX@68525|delta/epsilon subdivisions,2MSZ4@213481|Bdellovibrionales,2WIKS@28221|Deltaproteobacteria	213481|Bdellovibrionales	J	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction	tsaD	GO:0000408,GO:0002949,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0032991,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0070525,GO:0071704,GO:0090304,GO:1901360	2.3.1.234	ko:K01409	-	-	R10648	RC00070,RC00416	ko00000,ko01000,ko03016	-	-	-	Peptidase_M22
DYD3_k127_1052665_19	1201290.M902_0686	3.328e-18	94.0	COG1729@1|root,COG1729@2|Bacteria	2|Bacteria	S	protein trimerization	-	-	-	-	-	-	-	-	-	-	-	-	TPR_2,TPR_6,TPR_8
DYD3_k127_1052665_15	1353529.M899_1088	3.863e-51	186.0	COG2885@1|root,COG2885@2|Bacteria,1MZTV@1224|Proteobacteria,42R5H@68525|delta/epsilon subdivisions,2MT4C@213481|Bdellovibrionales,2WNZS@28221|Deltaproteobacteria	213481|Bdellovibrionales	M	Belongs to the ompA family	pal	-	-	ko:K03640	-	-	-	-	ko00000,ko02000	2.C.1.2	-	-	OmpA
DYD3_k127_1052665_13	1353529.M899_0356	3.602e-56	207.0	COG0010@1|root,COG0010@2|Bacteria,1NCRN@1224|Proteobacteria,42UZR@68525|delta/epsilon subdivisions,2MTBY@213481|Bdellovibrionales,2WR3H@28221|Deltaproteobacteria	213481|Bdellovibrionales	E	Belongs to the arginase family	hutG	-	3.5.3.8	ko:K01479	ko00340,ko01100,map00340,map01100	M00045	R02285	RC00221,RC00681	ko00000,ko00001,ko00002,ko01000	-	-	-	Arginase
DYD3_k127_1052665_5	1201288.M900_1195	1.437e-104	347.0	COG0491@1|root,COG0491@2|Bacteria,1R4FA@1224|Proteobacteria,42TJ6@68525|delta/epsilon subdivisions,2MURK@213481|Bdellovibrionales,2WR3Z@28221|Deltaproteobacteria	213481|Bdellovibrionales	S	Metallo-beta-lactamase superfamily	-	-	-	-	-	-	-	-	-	-	-	-	Lactamase_B
DYD3_k127_1052665_0	765869.BDW_14020	1.175e-164	526.0	COG0045@1|root,COG0045@2|Bacteria,1MVCE@1224|Proteobacteria,42M5K@68525|delta/epsilon subdivisions,2MSP8@213481|Bdellovibrionales,2WJTS@28221|Deltaproteobacteria	213481|Bdellovibrionales	F	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit	sucC	-	6.2.1.5	ko:K01903	ko00020,ko00640,ko00660,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00640,map00660,map00720,map01100,map01110,map01120,map01130,map01200	M00009,M00011,M00173,M00374,M00620	R00405,R02404	RC00004,RC00014	ko00000,ko00001,ko00002,ko01000	-	-	iAF987.Gmet_2261	ATP-grasp_2,Ligase_CoA
DYD3_k127_1052665_1	1353529.M899_0352	1.184e-159	506.0	COG0074@1|root,COG0074@2|Bacteria,1MUGA@1224|Proteobacteria,42M2W@68525|delta/epsilon subdivisions,2MSQU@213481|Bdellovibrionales,2WJBV@28221|Deltaproteobacteria	213481|Bdellovibrionales	C	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit	sucD	-	6.2.1.5	ko:K01902	ko00020,ko00640,ko00660,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00640,map00660,map00720,map01100,map01110,map01120,map01130,map01200	M00009,M00011,M00173,M00374,M00620	R00405,R02404	RC00004,RC00014	ko00000,ko00001,ko00002,ko01000	-	-	-	ATP-grasp_2,CoA_binding,Ligase_CoA
DYD3_k127_1052665_9	1201288.M900_1191	3.348e-66	228.0	COG0105@1|root,COG0105@2|Bacteria,1R9ZA@1224|Proteobacteria,42RIR@68525|delta/epsilon subdivisions,2MT1K@213481|Bdellovibrionales,2WP3R@28221|Deltaproteobacteria	213481|Bdellovibrionales	F	Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate	ndk	GO:0003674,GO:0003824,GO:0004550,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006163,GO:0006165,GO:0006220,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009117,GO:0009132,GO:0009987,GO:0015949,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0019205,GO:0019637,GO:0034641,GO:0044237,GO:0044238,GO:0044281,GO:0044464,GO:0046483,GO:0046939,GO:0055086,GO:0071704,GO:0072521,GO:0072527,GO:1901360,GO:1901564	2.7.4.6	ko:K00940	ko00230,ko00240,ko00983,ko01100,ko01110,ko01130,ko04016,map00230,map00240,map00983,map01100,map01110,map01130,map04016	M00049,M00050,M00052,M00053	R00124,R00139,R00156,R00330,R00570,R00722,R01137,R01857,R02093,R02326,R02331,R03530,R11894,R11895	RC00002	ko00000,ko00001,ko00002,ko01000,ko04131	-	-	-	NDK
DYD3_k127_1052665_12	1201290.M902_2722	2.087e-57	203.0	COG1329@1|root,COG1329@2|Bacteria,1MWI2@1224|Proteobacteria,42RXS@68525|delta/epsilon subdivisions,2MT64@213481|Bdellovibrionales,2WNA0@28221|Deltaproteobacteria	213481|Bdellovibrionales	K	PFAM Transcription factor CarD	-	-	-	ko:K07736	-	-	-	-	ko00000,ko03000	-	-	-	CarD_CdnL_TRCF
DYD3_k127_1052665_2	1184267.A11Q_1030	1.554e-130	432.0	COG0008@1|root,COG0008@2|Bacteria,1MUCR@1224|Proteobacteria,42MAI@68525|delta/epsilon subdivisions,2MSTD@213481|Bdellovibrionales,2WJ8M@28221|Deltaproteobacteria	213481|Bdellovibrionales	J	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)	gltX	-	6.1.1.17,6.1.1.24	ko:K01885,ko:K09698	ko00860,ko00970,ko01100,ko01110,ko01120,map00860,map00970,map01100,map01110,map01120	M00121,M00359,M00360	R03651,R05578	RC00055,RC00523	ko00000,ko00001,ko00002,ko01000,ko01007,ko02048,ko03016	-	-	-	tRNA-synt_1c
DYD3_k127_1052665_3	1304874.JAFY01000007_gene2426	1.76e-129	428.0	COG0215@1|root,COG0215@2|Bacteria,3TAAB@508458|Synergistetes	508458|Synergistetes	J	Belongs to the class-I aminoacyl-tRNA synthetase family	cysS	-	6.1.1.16	ko:K01883	ko00970,map00970	M00359,M00360	R03650	RC00055,RC00523	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	-	-	-	DALR_2,tRNA-synt_1e
DYD3_k127_1052665_20	862908.BMS_2419	2.418e-14	80.0	COG3637@1|root,COG3637@2|Bacteria	2|Bacteria	M	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety	-	-	-	-	-	-	-	-	-	-	-	-	OMP_b-brl
DYD3_k127_1115142_0	997346.HMPREF9374_0456	5.052e-42	163.0	COG0302@1|root,COG0302@2|Bacteria,1TRNM@1239|Firmicutes,4HAXS@91061|Bacilli,27B0B@186824|Thermoactinomycetaceae	91061|Bacilli	H	GTP cyclohydrolase I	folE	GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0003933,GO:0003934,GO:0005488,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006066,GO:0006725,GO:0006729,GO:0006732,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009108,GO:0009987,GO:0016787,GO:0016810,GO:0016814,GO:0017076,GO:0017144,GO:0018130,GO:0019001,GO:0019238,GO:0019438,GO:0019751,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0034311,GO:0034312,GO:0034641,GO:0035639,GO:0036094,GO:0042558,GO:0042559,GO:0043167,GO:0043168,GO:0043169,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046146,GO:0046165,GO:0046173,GO:0046483,GO:0046872,GO:0046914,GO:0051186,GO:0051188,GO:0071704,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901615,GO:1901617	3.5.4.16	ko:K01495	ko00790,ko01100,map00790,map01100	M00126,M00841,M00842,M00843	R00428,R04639,R05046,R05048	RC00263,RC00294,RC00323,RC00945,RC01188	ko00000,ko00001,ko00002,ko01000	-	-	-	GTP_cyclohydroI
DYD3_k127_1132917_23	930166.CD58_03415	5.855e-08	57.0	COG2608@1|root,COG2608@2|Bacteria,1NGBD@1224|Proteobacteria	1224|Proteobacteria	P	heavy metal transport detoxification protein	copZ	-	-	ko:K07213	ko04978,map04978	-	-	-	ko00000,ko00001	-	-	-	HMA
DYD3_k127_1132917_14	1353529.M899_0838	5.161e-42	164.0	COG2242@1|root,COG2242@2|Bacteria,1NZTT@1224|Proteobacteria,4312D@68525|delta/epsilon subdivisions,2MUDW@213481|Bdellovibrionales,2WWZM@28221|Deltaproteobacteria	213481|Bdellovibrionales	H	protein methyltransferase activity	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_1132917_7	518766.Rmar_0905	4.443e-78	274.0	COG0668@1|root,COG0668@2|Bacteria,4NHU7@976|Bacteroidetes	976|Bacteroidetes	M	mechanosensitive ion channel	-	-	-	ko:K16052	-	-	-	-	ko00000,ko02000	1.A.23.4	-	-	MS_channel
DYD3_k127_1132917_2	1192034.CAP_1165	5.98e-139	468.0	COG0380@1|root,COG1877@1|root,COG0380@2|Bacteria,COG1877@2|Bacteria,1MUIY@1224|Proteobacteria,42NBU@68525|delta/epsilon subdivisions,2WJX9@28221|Deltaproteobacteria,2YU3V@29|Myxococcales	28221|Deltaproteobacteria	G	glycosyl transferase family	otsAB	-	2.4.1.15,2.4.1.347,3.1.3.12	ko:K00697,ko:K16055	ko00500,ko01100,map00500,map01100	-	R02737,R02778	RC00005,RC00017,RC00049,RC02748	ko00000,ko00001,ko01000,ko01003	-	GT20	-	Glyco_transf_20,S6PP,Trehalose_PPase
DYD3_k127_1132917_0	1121957.ATVL01000009_gene1105	6.892e-198	632.0	COG3387@1|root,COG3387@2|Bacteria,4NEE6@976|Bacteroidetes,47MRU@768503|Cytophagia	976|Bacteroidetes	G	Glycosyl hydrolases family 15	-	-	3.2.1.3	ko:K01178	ko00500,ko01100,map00500,map01100	-	R01790,R01791,R06199	-	ko00000,ko00001,ko01000	-	GH15	-	Glyco_hydro_15
DYD3_k127_1132917_25	226186.BT_0204	0.0001171	52.0	COG2365@1|root,COG2365@2|Bacteria,4NQ5E@976|Bacteroidetes,2FNSK@200643|Bacteroidia,4AP8R@815|Bacteroidaceae	976|Bacteroidetes	T	Tyrosine phosphatase family	-	-	-	-	-	-	-	-	-	-	-	-	Y_phosphatase2,Y_phosphatase3
DYD3_k127_1132917_17	1353529.M899_3250	7.278e-32	130.0	2F8KH@1|root,340Z5@2|Bacteria	2|Bacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_1132917_1	1201288.M900_1831	9.49e-175	555.0	2CH0S@1|root,341IR@2|Bacteria	2|Bacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_1132917_15	926549.KI421517_gene3379	1.691e-40	159.0	29FE7@1|root,302BX@2|Bacteria,4NMTG@976|Bacteroidetes	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_1132917_12	1353529.M899_1172	3.155e-46	170.0	COG3118@1|root,COG3118@2|Bacteria,1PP8X@1224|Proteobacteria,43A7C@68525|delta/epsilon subdivisions,2MUER@213481|Bdellovibrionales,2WPUQ@28221|Deltaproteobacteria	213481|Bdellovibrionales	O	Thioredoxin-like domain	-	-	-	ko:K03671	ko04621,ko05418,map04621,map05418	-	-	-	ko00000,ko00001,ko03110	-	-	-	Thioredoxin
DYD3_k127_1132917_10	378806.STAUR_7606	2.025e-60	236.0	COG0642@1|root,COG2203@1|root,COG3829@1|root,COG2203@2|Bacteria,COG2205@2|Bacteria,COG3829@2|Bacteria,1NRP8@1224|Proteobacteria,430R6@68525|delta/epsilon subdivisions,2WVZ1@28221|Deltaproteobacteria	28221|Deltaproteobacteria	T	Domain present in phytochromes and cGMP-specific phosphodiesterases.	-	-	-	-	-	-	-	-	-	-	-	-	GAF,GAF_2,HATPase_c,HisKA,PAS_4
DYD3_k127_1132917_13	1353529.M899_0912	1.468e-42	165.0	COG0428@1|root,COG0428@2|Bacteria	2|Bacteria	P	transporter	gufA	-	-	ko:K07238	-	-	-	-	ko00000,ko02000	2.A.5.5	-	-	Zip
DYD3_k127_1132917_3	1249480.B649_07620	6.427e-115	387.0	COG0397@1|root,COG0397@2|Bacteria,1MVK3@1224|Proteobacteria,42NTK@68525|delta/epsilon subdivisions,2YNFT@29547|Epsilonproteobacteria	29547|Epsilonproteobacteria	S	Belongs to the UPF0061 (SELO) family	-	-	-	-	-	-	-	-	-	-	-	-	UPF0061
DYD3_k127_1132917_8	1122599.AUGR01000010_gene1086	7.697e-78	267.0	COG2326@1|root,COG2326@2|Bacteria,1MVE2@1224|Proteobacteria,1RM9U@1236|Gammaproteobacteria,1XJ0A@135619|Oceanospirillales	135619|Oceanospirillales	S	Polyphosphate kinase 2 (PPK2)	-	-	-	-	-	-	-	-	-	-	-	-	PPK2
DYD3_k127_1132917_9	1123401.JHYQ01000009_gene2282	9.916e-61	220.0	COG0189@1|root,COG0189@2|Bacteria,1MV29@1224|Proteobacteria,1SB70@1236|Gammaproteobacteria	1236|Gammaproteobacteria	HJ	COG0189 Glutathione synthase Ribosomal protein S6 modification enzyme (glutaminyl transferase)	dcsG	-	-	-	-	-	-	-	-	-	-	-	GSH-S_ATP,RimK
DYD3_k127_1132917_6	860228.Ccan_04870	4.195e-87	295.0	COG1741@1|root,COG1741@2|Bacteria,4NGJ5@976|Bacteroidetes,1HYY2@117743|Flavobacteriia,1ESRQ@1016|Capnocytophaga	976|Bacteroidetes	S	Pirin	yhhW	-	-	ko:K06911	-	-	-	-	ko00000	-	-	-	Pirin
DYD3_k127_1132917_19	1184267.A11Q_123	1.781e-24	107.0	COG1765@1|root,COG1765@2|Bacteria,1N2BT@1224|Proteobacteria,42NP7@68525|delta/epsilon subdivisions,2MUI2@213481|Bdellovibrionales,2WKJU@28221|Deltaproteobacteria	213481|Bdellovibrionales	O	PFAM OsmC family protein	-	-	-	ko:K06889,ko:K07397	-	-	-	-	ko00000	-	-	-	Abhydrolase_1,Hydrolase_4,OsmC
DYD3_k127_1132917_5	573065.Astex_2603	8.17e-89	301.0	COG1741@1|root,COG1741@2|Bacteria,1MWIP@1224|Proteobacteria,2TRHR@28211|Alphaproteobacteria,2KFQ3@204458|Caulobacterales	204458|Caulobacterales	S	Belongs to the pirin family	-	-	-	ko:K06911	-	-	-	-	ko00000	-	-	-	Pirin,Pirin_C
DYD3_k127_1132917_16	56780.SYN_00961	4.867e-36	143.0	COG1406@1|root,COG1406@2|Bacteria,1RATZ@1224|Proteobacteria,42R2Q@68525|delta/epsilon subdivisions,2WP6F@28221|Deltaproteobacteria,2MS5R@213462|Syntrophobacterales	28221|Deltaproteobacteria	N	Chemotaxis phosphatase CheX	-	-	-	ko:K03409	ko02030,map02030	-	-	-	ko00000,ko00001,ko02035	-	-	-	CheX
DYD3_k127_1132917_18	318996.AXAZ01000031_gene3284	1.677e-26	110.0	2DJKR@1|root,32YT5@2|Bacteria,1NACC@1224|Proteobacteria,2UDCH@28211|Alphaproteobacteria,3K0FK@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_1132917_4	1229172.JQFA01000002_gene2150	9.996e-96	318.0	COG0625@1|root,COG0625@2|Bacteria,1G1K3@1117|Cyanobacteria,1HBTT@1150|Oscillatoriales	1117|Cyanobacteria	O	Glutathione S-transferase, N-terminal domain	-	-	2.5.1.18	ko:K00799	ko00480,ko00980,ko00982,ko00983,ko01524,ko05200,ko05204,ko05225,ko05418,map00480,map00980,map00982,map00983,map01524,map05200,map05204,map05225,map05418	-	R03522,R07002,R07003,R07004,R07023,R07024,R07025,R07026,R07069,R07070,R07083,R07084,R07091,R07092,R07093,R07094,R07100,R07113,R07116,R08280,R09409,R11905	RC00004,RC00069,RC00840,RC00948,RC01704,RC01705,RC01706,RC01758,RC01759,RC01765,RC01767,RC01769,RC02243,RC02527,RC02939,RC02940,RC02942,RC02943,RC02944	ko00000,ko00001,ko01000,ko02000	1.A.12.2.2,1.A.12.3.2	-	-	GST_C,GST_C_3,GST_N
DYD3_k127_1132917_24	326298.Suden_1270	6.921e-06	59.0	COG2199@1|root,COG2199@2|Bacteria,1N1BS@1224|Proteobacteria,42T9K@68525|delta/epsilon subdivisions,2YPNM@29547|Epsilonproteobacteria	29547|Epsilonproteobacteria	T	Diguanylate cyclase	-	-	-	-	-	-	-	-	-	-	-	-	GGDEF
DYD3_k127_1132917_22	9258.ENSOANP00000029950	4.579e-09	67.0	KOG3544@1|root,KOG3544@2759|Eukaryota,3AMAS@33154|Opisthokonta,3C0K0@33208|Metazoa,3D9NG@33213|Bilateria,48GBS@7711|Chordata,49DBJ@7742|Vertebrata	33208|Metazoa	W	Collagen triple helix repeat (20 copies)	-	-	-	ko:K16617	ko04974,map04974	-	-	-	ko00000,ko00001,ko00536	-	-	-	Collagen
DYD3_k127_1144429_2	927658.AJUM01000010_gene1346	2.436e-89	305.0	COG0513@1|root,COG0513@2|Bacteria,4NEVI@976|Bacteroidetes,2FM7Y@200643|Bacteroidia,3XKQQ@558415|Marinilabiliaceae	976|Bacteroidetes	L	helicase superfamily c-terminal domain	rhlE	-	3.6.4.13	ko:K11927	ko03018,map03018	-	-	-	ko00000,ko00001,ko01000,ko03019	-	-	-	DEAD,Helicase_C
DYD3_k127_1144429_8	1123366.TH3_13184	2.06e-15	79.0	COG0640@1|root,COG0640@2|Bacteria,1N72Q@1224|Proteobacteria,2UFSY@28211|Alphaproteobacteria,2JT9E@204441|Rhodospirillales	204441|Rhodospirillales	K	transcriptional regulators	-	-	-	ko:K22042	-	-	-	-	ko00000,ko03000	-	-	-	HTH_5
DYD3_k127_1144429_10	323848.Nmul_A1681	2.064e-09	67.0	COG0730@1|root,COG0730@2|Bacteria,1MVBS@1224|Proteobacteria,2VQ23@28216|Betaproteobacteria,37327@32003|Nitrosomonadales	28216|Betaproteobacteria	S	membrane transporter protein	-	-	-	ko:K07090	-	-	-	-	ko00000	-	-	-	TauE
DYD3_k127_1144429_6	1254432.SCE1572_13345	1.129e-36	143.0	COG2391@1|root,COG2391@2|Bacteria,1MZ3A@1224|Proteobacteria,42XXQ@68525|delta/epsilon subdivisions,2WSR1@28221|Deltaproteobacteria,2YVMI@29|Myxococcales	28221|Deltaproteobacteria	S	transporter component	-	-	-	ko:K07112	-	-	-	-	ko00000	-	-	-	Sulf_transp
DYD3_k127_1144429_5	1184267.A11Q_270	1.492e-37	145.0	COG2391@1|root,COG2391@2|Bacteria,1MZC0@1224|Proteobacteria,43EZ4@68525|delta/epsilon subdivisions,2MT2Z@213481|Bdellovibrionales,2X2Q0@28221|Deltaproteobacteria	213481|Bdellovibrionales	S	Transporter Component	-	-	-	ko:K07112	-	-	-	-	ko00000	-	-	-	Sulf_transp
DYD3_k127_1144429_1	1218084.BBJK01000080_gene5531	5.094e-92	316.0	COG0491@1|root,COG0607@1|root,COG0491@2|Bacteria,COG0607@2|Bacteria,1MURA@1224|Proteobacteria,2VJYK@28216|Betaproteobacteria,1K220@119060|Burkholderiaceae	28216|Betaproteobacteria	P	PFAM beta-lactamase domain protein	-	-	-	-	-	-	-	-	-	-	-	-	Lactamase_B,Rhodanese
DYD3_k127_1144429_0	264462.Bd0916	9.449e-253	804.0	COG0474@1|root,COG0474@2|Bacteria,1MUU5@1224|Proteobacteria,42M8F@68525|delta/epsilon subdivisions,2WIU0@28221|Deltaproteobacteria	28221|Deltaproteobacteria	P	ATPase, P-type (transporting), HAD superfamily, subfamily IC	-	-	3.6.3.8	ko:K01537	-	-	-	-	ko00000,ko01000	3.A.3.2	-	-	Cation_ATPase_C,Cation_ATPase_N,E1-E2_ATPase,Hydrolase
DYD3_k127_1144429_4	1122951.ATUE01000009_gene461	9.621e-40	151.0	COG0824@1|root,COG0824@2|Bacteria,1MZFI@1224|Proteobacteria,1S8XF@1236|Gammaproteobacteria,3NN8Y@468|Moraxellaceae	1236|Gammaproteobacteria	S	Thioesterase-like superfamily	-	-	-	ko:K07107	-	-	-	-	ko00000,ko01000	-	-	-	4HBT,4HBT_2
DYD3_k127_1144429_9	1366050.N234_25550	4.481e-14	75.0	2CHP3@1|root,33CM7@2|Bacteria,1NHT2@1224|Proteobacteria,2VXWE@28216|Betaproteobacteria	28216|Betaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_1144429_3	1353529.M899_0955	6.339e-53	190.0	COG0545@1|root,COG0545@2|Bacteria,1RDA1@1224|Proteobacteria,42TNB@68525|delta/epsilon subdivisions,2MU5C@213481|Bdellovibrionales,2WQIG@28221|Deltaproteobacteria	213481|Bdellovibrionales	O	Peptidyl-prolyl cis-trans	fbp	-	5.2.1.8	ko:K01802,ko:K03772	-	-	-	-	ko00000,ko01000,ko03110	-	-	-	FKBP_C
DYD3_k127_1144429_7	926566.Terro_1471	1.707e-16	84.0	COG5478@1|root,COG5478@2|Bacteria,3Y898@57723|Acidobacteria,2JN9V@204432|Acidobacteriia	204432|Acidobacteriia	S	Low affinity iron permease	-	-	-	-	-	-	-	-	-	-	-	-	Iron_permease
DYD3_k127_1208454_8	765910.MARPU_12820	1.634e-08	57.0	COG1541@1|root,COG1541@2|Bacteria,1NR5G@1224|Proteobacteria,1RRCG@1236|Gammaproteobacteria,1X1D2@135613|Chromatiales	135613|Chromatiales	H	Acyl-protein synthetase, LuxE	-	-	-	-	-	-	-	-	-	-	-	-	LuxE
DYD3_k127_1208454_1	944480.ATUV01000002_gene145	4.14e-109	383.0	COG1541@1|root,COG1541@2|Bacteria,1MV1W@1224|Proteobacteria,42T0Z@68525|delta/epsilon subdivisions,2WP97@28221|Deltaproteobacteria,2M7K4@213113|Desulfurellales	28221|Deltaproteobacteria	H	Acyl-CoA reductase (LuxC)	-	-	-	-	-	-	-	-	-	-	-	-	AMP-binding,AMP-binding_C_2,LuxC
DYD3_k127_1208454_3	862908.BMS_0828	4.93e-73	261.0	2F694@1|root,33YSW@2|Bacteria,1NXVC@1224|Proteobacteria,430T8@68525|delta/epsilon subdivisions,2MU3V@213481|Bdellovibrionales,2WVU1@28221|Deltaproteobacteria	213481|Bdellovibrionales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_1208454_10	1123248.KB893348_gene193	5.896e-06	56.0	COG2353@1|root,COG2353@2|Bacteria,4NI82@976|Bacteroidetes,1IXPV@117747|Sphingobacteriia	976|Bacteroidetes	S	YceI-like domain	-	-	-	-	-	-	-	-	-	-	-	-	YceI
DYD3_k127_1208454_0	1297742.A176_00558	5.142e-302	940.0	COG3808@1|root,COG3808@2|Bacteria,1MUQ3@1224|Proteobacteria,42N1H@68525|delta/epsilon subdivisions,2WJ0R@28221|Deltaproteobacteria,2YUGV@29|Myxococcales	28221|Deltaproteobacteria	C	Sodium pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for Na( ) movement across the membrane	hppA	-	3.6.1.1	ko:K15987	ko00190,map00190	-	-	-	ko00000,ko00001,ko01000	3.A.10.1	-	-	H_PPase
DYD3_k127_1208454_12	1279009.ADICEAN_00908	2.64e-05	51.0	COG0457@1|root,COG2849@1|root,COG0457@2|Bacteria,COG2849@2|Bacteria,4NMDX@976|Bacteroidetes,47N8G@768503|Cytophagia	976|Bacteroidetes	S	MORN repeat variant	-	-	-	-	-	-	-	-	-	-	-	-	MORN_2,TPR_1,TPR_16,TPR_8
DYD3_k127_1208454_9	1535422.ND16A_0828	4.718e-07	61.0	28MF5@1|root,2ZASN@2|Bacteria,1R7FY@1224|Proteobacteria,1RZXC@1236|Gammaproteobacteria	1236|Gammaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_1208454_11	754027.HMPREF9554_01638	2.049e-05	55.0	COG0666@1|root,COG0666@2|Bacteria,2J70T@203691|Spirochaetes	203691|Spirochaetes	S	Ankyrin repeat protein	-	-	-	ko:K06867	-	-	-	-	ko00000	-	-	-	Ank,Ank_2,Ank_4,Ank_5
DYD3_k127_1208454_13	1151117.AJLF01000001_gene1670	0.0003547	46.0	COG3620@1|root,arCOG00608@2157|Archaea,2XTDG@28890|Euryarchaeota,242XH@183968|Thermococci	183968|Thermococci	K	Helix-turn-helix domain	-	-	-	-	-	-	-	-	-	-	-	-	CBS,HTH_3
DYD3_k127_1208454_2	283942.IL1429	2.961e-75	261.0	COG0861@1|root,COG0861@2|Bacteria,1MWC9@1224|Proteobacteria,1T1GE@1236|Gammaproteobacteria,2QF8T@267893|Idiomarinaceae	1236|Gammaproteobacteria	P	Integral membrane protein TerC family	ygdQ	GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944	-	-	-	-	-	-	-	-	-	-	TerC
DYD3_k127_1208454_5	1201288.M900_2245	7.597e-35	137.0	2C8BN@1|root,32RKS@2|Bacteria,1N7Z0@1224|Proteobacteria,42WEU@68525|delta/epsilon subdivisions,2WS8J@28221|Deltaproteobacteria	28221|Deltaproteobacteria	S	Glycine-zipper domain	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_1208454_4	111781.Lepto7376_3386	1.496e-54	194.0	COG0346@1|root,COG0346@2|Bacteria,1G504@1117|Cyanobacteria,1HAPB@1150|Oscillatoriales	1117|Cyanobacteria	E	Lactoylglutathione lyase	gloA	-	4.4.1.5	ko:K01759	ko00620,map00620	-	R02530	RC00004,RC00740	ko00000,ko00001,ko01000	-	-	-	Glyoxalase
DYD3_k127_1213224_9	765869.BDW_01235	3.801e-08	58.0	COG0009@1|root,COG0009@2|Bacteria,1MVPM@1224|Proteobacteria,42T6S@68525|delta/epsilon subdivisions,2MTS9@213481|Bdellovibrionales,2WP34@28221|Deltaproteobacteria	213481|Bdellovibrionales	J	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine	yrdC1	-	2.7.7.87	ko:K07566	-	-	R10463	RC00745	ko00000,ko01000,ko03009,ko03016	-	-	-	SUA5,Sua5_yciO_yrdC
DYD3_k127_1213224_5	1201288.M900_2388	2.444e-63	222.0	COG1778@1|root,COG1778@2|Bacteria,1RH85@1224|Proteobacteria,42UGA@68525|delta/epsilon subdivisions,2MTAQ@213481|Bdellovibrionales,2WQSR@28221|Deltaproteobacteria	213481|Bdellovibrionales	S	haloacid dehalogenase-like hydrolase	-	-	3.1.3.45	ko:K03270	ko00540,ko01100,map00540,map01100	M00063	R03350	RC00017	ko00000,ko00001,ko00002,ko01000,ko01005	-	-	-	Hydrolase_3
DYD3_k127_1213224_1	862908.BMS_2533	1.276e-128	415.0	COG2877@1|root,COG2877@2|Bacteria,1MV91@1224|Proteobacteria,42M61@68525|delta/epsilon subdivisions,2MSXU@213481|Bdellovibrionales,2WIXU@28221|Deltaproteobacteria	213481|Bdellovibrionales	M	3-deoxy-D-manno-octulosonic acid 8-phosphate synthase	kdsA	-	2.5.1.55	ko:K01627	ko00540,ko01100,map00540,map01100	M00063	R03254	RC00435	ko00000,ko00001,ko00002,ko01000,ko01005	-	-	-	DAHP_synth_1
DYD3_k127_1213224_0	1353529.M899_2518	1.05e-271	842.0	COG0504@1|root,COG0504@2|Bacteria,1MUIT@1224|Proteobacteria,42MEU@68525|delta/epsilon subdivisions,2MSV6@213481|Bdellovibrionales,2WJ0F@28221|Deltaproteobacteria	213481|Bdellovibrionales	F	Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates	pyrG	-	6.3.4.2	ko:K01937	ko00240,ko01100,map00240,map01100	M00052	R00571,R00573	RC00010,RC00074	ko00000,ko00001,ko00002,ko01000	-	-	iAF987.Gmet_1276	CTP_synth_N,GATase
DYD3_k127_1213224_3	1353529.M899_2519	2.98e-86	291.0	COG1212@1|root,COG1212@2|Bacteria,1MUUU@1224|Proteobacteria,42PTX@68525|delta/epsilon subdivisions,2MT6R@213481|Bdellovibrionales,2WMQW@28221|Deltaproteobacteria	213481|Bdellovibrionales	M	Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria	kdsB	-	2.7.7.38	ko:K00979	ko00540,ko01100,map00540,map01100	M00063	R03351,R11396	RC00152,RC00910	ko00000,ko00001,ko00002,ko01000,ko01005	-	-	-	CTP_transf_3
DYD3_k127_1213224_4	862908.BMS_2537	1.847e-84	298.0	COG1538@1|root,COG1538@2|Bacteria	2|Bacteria	MU	efflux transmembrane transporter activity	-	-	-	ko:K03287	-	-	-	-	ko00000	1.B.17	-	-	OEP
DYD3_k127_1213224_2	765869.BDW_07015	4.698e-95	326.0	COG0015@1|root,COG0015@2|Bacteria,1MV4B@1224|Proteobacteria,42MYS@68525|delta/epsilon subdivisions,2MSSK@213481|Bdellovibrionales,2WJ2E@28221|Deltaproteobacteria	213481|Bdellovibrionales	F	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily	purB	-	4.3.2.2	ko:K01756	ko00230,ko00250,ko01100,ko01110,ko01130,map00230,map00250,map01100,map01110,map01130	M00048,M00049	R01083,R04559	RC00379,RC00444,RC00445	ko00000,ko00001,ko00002,ko01000	-	-	-	ADSL_C,Lyase_1
DYD3_k127_1213224_6	1201288.M900_2399	3.63e-31	129.0	COG3087@1|root,COG3087@2|Bacteria,1MYFG@1224|Proteobacteria,437H8@68525|delta/epsilon subdivisions,2MTC0@213481|Bdellovibrionales,2X2QR@28221|Deltaproteobacteria	213481|Bdellovibrionales	D	Sporulation related domain	-	-	-	-	-	-	-	-	-	-	-	-	SPOR
DYD3_k127_1213224_11	1353529.M899_2533	1.606e-05	54.0	COG1450@1|root,COG1450@2|Bacteria	2|Bacteria	NU	protein transport across the cell outer membrane	-	-	-	ko:K02453,ko:K12282	ko03070,ko05111,map03070,map05111	M00331	-	-	ko00000,ko00001,ko00002,ko02044	3.A.15	-	-	OmpA,Secretin,Secretin_N,T2SS-T3SS_pil_N
DYD3_k127_1223329_2	1353529.M899_1771	7.869e-50	186.0	COG4121@1|root,COG4121@2|Bacteria,1Q8T8@1224|Proteobacteria,42RAP@68525|delta/epsilon subdivisions,2MTG2@213481|Bdellovibrionales,2WYBB@28221|Deltaproteobacteria	213481|Bdellovibrionales	S	S-adenosyl-L-methionine-dependent methyltransferase	-	-	-	-	-	-	-	-	-	-	-	-	Methyltransf_30
DYD3_k127_1223329_0	862908.BMS_1717	6.34e-115	378.0	COG2070@1|root,COG2070@2|Bacteria,1MWPC@1224|Proteobacteria,43AEV@68525|delta/epsilon subdivisions,2MUQU@213481|Bdellovibrionales,2X5YA@28221|Deltaproteobacteria	213481|Bdellovibrionales	S	2-nitropropane dioxygenase	-	-	1.3.1.9	ko:K02371	ko00061,ko01100,ko01212,map00061,map01100,map01212	M00083	R04429,R04724,R04955,R04958,R04961,R04966,R04969,R07765	RC00052,RC00076	ko00000,ko00001,ko00002,ko01000,ko01004	-	-	-	NMO
DYD3_k127_1223329_3	264462.Bd1657	1.222e-46	188.0	COG4191@1|root,COG4191@2|Bacteria,1RCM9@1224|Proteobacteria,42MC4@68525|delta/epsilon subdivisions,2MSXW@213481|Bdellovibrionales,2WIZU@28221|Deltaproteobacteria	213481|Bdellovibrionales	T	Histidine kinase A domain protein	-	-	-	-	-	-	-	-	-	-	-	-	ABC_sub_bind,HATPase_c,HisKA,PAS_3,PAS_4,PAS_9,Response_reg
DYD3_k127_1223329_4	99598.Cal7507_3622	0.0005346	44.0	COG2202@1|root,COG2204@1|root,COG4191@1|root,COG5278@1|root,COG2202@2|Bacteria,COG2204@2|Bacteria,COG4191@2|Bacteria,COG5278@2|Bacteria,1G1PE@1117|Cyanobacteria,1HJYY@1161|Nostocales	1117|Cyanobacteria	T	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase	-	-	-	-	-	-	-	-	-	-	-	-	CHASE3,HATPase_c,HisKA,PAS,PAS_3,PAS_4,PAS_9,Response_reg
DYD3_k127_1223329_1	1353529.M899_1767	1.033e-103	345.0	COG0501@1|root,COG0501@2|Bacteria,1MUV4@1224|Proteobacteria,42MEE@68525|delta/epsilon subdivisions,2MTIG@213481|Bdellovibrionales,2WMES@28221|Deltaproteobacteria	213481|Bdellovibrionales	O	Belongs to the peptidase M48B family	htpX	-	-	ko:K03799	-	M00743	-	-	ko00000,ko00002,ko01000,ko01002	-	-	-	Peptidase_M48
DYD3_k127_1226716_0	862908.BMS_0656	3.194e-80	270.0	COG0652@1|root,COG0652@2|Bacteria,1R9ZQ@1224|Proteobacteria,43AKE@68525|delta/epsilon subdivisions,2MT02@213481|Bdellovibrionales,2WMV2@28221|Deltaproteobacteria	213481|Bdellovibrionales	O	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides	-	-	5.2.1.8	ko:K03767	ko01503,ko04217,map01503,map04217	-	-	-	ko00000,ko00001,ko01000,ko03110,ko04147	-	-	-	Pro_isomerase
DYD3_k127_1226716_3	1353529.M899_1189	1.058e-47	188.0	COG0654@1|root,COG0654@2|Bacteria	2|Bacteria	CH	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases	-	-	-	-	-	-	-	-	-	-	-	-	FAD_binding_3,NAD_binding_8
DYD3_k127_1226716_4	1353529.M899_1190	1.843e-45	169.0	2C7BH@1|root,2ZNWA@2|Bacteria,1P9AT@1224|Proteobacteria,4324U@68525|delta/epsilon subdivisions,2MTC7@213481|Bdellovibrionales,2WXVQ@28221|Deltaproteobacteria	213481|Bdellovibrionales	S	PilZ domain	-	-	-	-	-	-	-	-	-	-	-	-	PilZ
DYD3_k127_1226716_1	765869.BDW_06610	4.747e-80	274.0	COG0796@1|root,COG0796@2|Bacteria,1NAI2@1224|Proteobacteria,42P58@68525|delta/epsilon subdivisions,2MT8C@213481|Bdellovibrionales,2WKYK@28221|Deltaproteobacteria	213481|Bdellovibrionales	M	Provides the (R)-glutamate required for cell wall biosynthesis	murI	-	5.1.1.3	ko:K01776	ko00471,ko01100,map00471,map01100	-	R00260	RC00302	ko00000,ko00001,ko01000,ko01011	-	-	iAF987.Gmet_0547	Asp_Glu_race
DYD3_k127_1226716_2	903818.KI912268_gene1318	4.888e-60	220.0	COG0702@1|root,COG0702@2|Bacteria,3Y7DF@57723|Acidobacteria	57723|Acidobacteria	GM	Protein of unknown function (DUF2867)	-	-	-	-	-	-	-	-	-	-	-	-	DUF2867,NAD_binding_10
DYD3_k127_1226716_5	1231057.AMGD01000001_gene2417	3.82e-41	160.0	COG0702@1|root,COG0702@2|Bacteria,1TT3N@1239|Firmicutes,4HB09@91061|Bacilli	91061|Bacilli	GM	NAD(P)H-binding	-	-	1.6.5.3,1.6.99.3	ko:K00329,ko:K00356	ko00190,map00190	-	R11945	RC00061	ko00000,ko00001,ko01000	-	-	-	NAD_binding_10
DYD3_k127_1231363_29	1353529.M899_3356	1.114e-24	104.0	COG0439@1|root,COG0439@2|Bacteria,1MU4H@1224|Proteobacteria,42M14@68525|delta/epsilon subdivisions,2MTQX@213481|Bdellovibrionales,2WIN7@28221|Deltaproteobacteria	213481|Bdellovibrionales	I	Biotin carboxylase	-	-	6.3.4.14,6.4.1.2	ko:K01961	ko00061,ko00620,ko00640,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00061,map00620,map00640,map00720,map01100,map01110,map01120,map01130,map01200,map01212	M00082,M00376	R00742,R04385	RC00040,RC00253,RC00367	ko00000,ko00001,ko00002,ko01000	-	-	-	Biotin_carb_C,Biotin_carb_N,CPSase_L_D2
DYD3_k127_1231363_0	1353529.M899_3357	1.017e-254	793.0	COG4799@1|root,COG4799@2|Bacteria,1MVAX@1224|Proteobacteria,43AEE@68525|delta/epsilon subdivisions,2MSTZ@213481|Bdellovibrionales,2WIRF@28221|Deltaproteobacteria	213481|Bdellovibrionales	I	PFAM carboxyl transferase	pccB	-	2.1.3.1,2.1.3.15,6.4.1.3	ko:K01966,ko:K17489	ko00280,ko00630,ko00640,ko01100,ko01120,ko01130,ko01200,map00280,map00630,map00640,map01100,map01120,map01130,map01200	M00373,M00741	R00353,R01859	RC00040,RC00097,RC00609	ko00000,ko00001,ko00002,ko01000	-	-	-	Carboxyl_trans
DYD3_k127_1231363_12	1353529.M899_1365	5.545e-65	234.0	COG3093@1|root,COG3093@2|Bacteria,1P59P@1224|Proteobacteria,43343@68525|delta/epsilon subdivisions,2MUG7@213481|Bdellovibrionales,2WXZZ@28221|Deltaproteobacteria	213481|Bdellovibrionales	K	Domain of unknown function (DUF4423)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4423
DYD3_k127_1231363_1	1353529.M899_3358	1.583e-209	665.0	COG3829@1|root,COG3829@2|Bacteria,1NU8B@1224|Proteobacteria,43BKG@68525|delta/epsilon subdivisions,2MSNM@213481|Bdellovibrionales,2X6YI@28221|Deltaproteobacteria	213481|Bdellovibrionales	KT	PFAM sigma-54 factor interaction domain-containing protein	-	-	-	ko:K02584	ko02020,map02020	-	-	-	ko00000,ko00001,ko03000	-	-	-	GAF,GAF_2,HTH_8,Pkinase,PocR,Sigma54_activat
DYD3_k127_1231363_24	1201288.M900_2670	1.488e-34	139.0	COG0526@1|root,COG0526@2|Bacteria,1Q3FU@1224|Proteobacteria,432R6@68525|delta/epsilon subdivisions,2WYA7@28221|Deltaproteobacteria	28221|Deltaproteobacteria	O	Thioredoxin-like	-	-	-	-	-	-	-	-	-	-	-	-	AhpC-TSA
DYD3_k127_1231363_18	862908.BMS_3273	2.586e-44	163.0	COG0203@1|root,COG0203@2|Bacteria,1RCWN@1224|Proteobacteria,42SBD@68525|delta/epsilon subdivisions,2MT93@213481|Bdellovibrionales,2WP9P@28221|Deltaproteobacteria	213481|Bdellovibrionales	J	Ribosomal protein L17	rplQ	GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904	-	ko:K02879	ko03010,map03010	M00178	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_L17
DYD3_k127_1231363_2	1353529.M899_3361	6.205e-172	544.0	COG0202@1|root,COG0202@2|Bacteria,1MU75@1224|Proteobacteria,42MIX@68525|delta/epsilon subdivisions,2MSPW@213481|Bdellovibrionales,2WJ5K@28221|Deltaproteobacteria	213481|Bdellovibrionales	K	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates	rpoA	GO:0003674,GO:0003824,GO:0003899,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006351,GO:0006354,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0032774,GO:0034062,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0097659,GO:0097747,GO:0140098,GO:1901360,GO:1901362,GO:1901576	2.7.7.6	ko:K03040	ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020	M00183	R00435,R00441,R00442,R00443	RC02795	br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400	-	-	-	RNA_pol_A_CTD,RNA_pol_A_bac,RNA_pol_L
DYD3_k127_1231363_16	862908.BMS_3275	6.665e-56	198.0	COG0100@1|root,COG0100@2|Bacteria,1RD0A@1224|Proteobacteria,42R43@68525|delta/epsilon subdivisions,2MSZK@213481|Bdellovibrionales,2WPH1@28221|Deltaproteobacteria	213481|Bdellovibrionales	J	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome	rpsK	GO:0000028,GO:0000462,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006139,GO:0006364,GO:0006396,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0016070,GO:0016072,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0030490,GO:0032991,GO:0034470,GO:0034622,GO:0034641,GO:0034645,GO:0034660,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046483,GO:0048027,GO:0065003,GO:0070181,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904	-	ko:K02948	ko03010,map03010	M00178,M00179	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_S11
DYD3_k127_1231363_20	1304284.L21TH_0918	3.905e-41	154.0	COG0099@1|root,COG0099@2|Bacteria,1V3JH@1239|Firmicutes,24HCT@186801|Clostridia,36IR2@31979|Clostridiaceae	186801|Clostridia	J	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits	rpsM	-	-	ko:K02952	ko03010,map03010	M00178,M00179	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_S13
DYD3_k127_1231363_35	1353529.M899_3364	1.497e-14	73.0	COG0257@1|root,COG0257@2|Bacteria	2|Bacteria	J	Belongs to the bacterial ribosomal protein bL36 family	rpmJ	GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904	-	ko:K02919	ko03010,map03010	M00178	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_L36
DYD3_k127_1231363_26	1201288.M900_2676	3.317e-32	126.0	COG0361@1|root,COG0361@2|Bacteria,1MZFU@1224|Proteobacteria,42TRU@68525|delta/epsilon subdivisions,2WPZK@28221|Deltaproteobacteria	28221|Deltaproteobacteria	J	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex	infA	GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0043021,GO:0043022,GO:0044424,GO:0044444,GO:0044464,GO:0044877	-	ko:K02518	-	-	-	-	ko00000,ko03012	-	-	-	eIF-1a
DYD3_k127_1231363_11	862908.BMS_3279	4.086e-66	231.0	COG0563@1|root,COG0563@2|Bacteria,1MXCZ@1224|Proteobacteria,42M8E@68525|delta/epsilon subdivisions,2MT2Q@213481|Bdellovibrionales,2WJH0@28221|Deltaproteobacteria	213481|Bdellovibrionales	F	Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism	adk	GO:0003674,GO:0003824,GO:0004017,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009165,GO:0009987,GO:0015949,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046483,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901576	2.7.4.3	ko:K00939	ko00230,ko00730,ko01100,ko01110,ko01130,map00230,map00730,map01100,map01110,map01130	M00049	R00127,R01547,R11319	RC00002	ko00000,ko00001,ko00002,ko01000,ko04147	-	-	-	ADK,ADK_lid
DYD3_k127_1231363_3	1121448.DGI_2813	4.593e-149	483.0	COG0201@1|root,COG0201@2|Bacteria,1MVU7@1224|Proteobacteria,42MGM@68525|delta/epsilon subdivisions,2WIZ7@28221|Deltaproteobacteria,2M8YH@213115|Desulfovibrionales	28221|Deltaproteobacteria	U	The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently	secY	-	-	ko:K03076	ko02024,ko03060,ko03070,map02024,map03060,map03070	M00335	-	-	ko00000,ko00001,ko00002,ko02044	3.A.5	-	-	SecY
DYD3_k127_1231363_14	862908.BMS_3281	1.213e-57	203.0	COG0200@1|root,COG0200@2|Bacteria,1RDC8@1224|Proteobacteria,42SRC@68525|delta/epsilon subdivisions,2MT8F@213481|Bdellovibrionales,2WQQ4@28221|Deltaproteobacteria	213481|Bdellovibrionales	J	Binds to the 23S rRNA	rplO	GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904	-	ko:K02876	ko03010,map03010	M00178,M00179	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_L27A
DYD3_k127_1231363_34	1201288.M900_2680	5.216e-16	78.0	COG1841@1|root,COG1841@2|Bacteria,1Q1P1@1224|Proteobacteria,42WX1@68525|delta/epsilon subdivisions,2MTDN@213481|Bdellovibrionales,2WSJZ@28221|Deltaproteobacteria	213481|Bdellovibrionales	J	Ribosomal protein L30	rpmD	GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904	-	ko:K02907	ko03010,map03010	M00178,M00179	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_L30
DYD3_k127_1231363_10	1353529.M899_3370	1.478e-72	250.0	COG0098@1|root,COG0098@2|Bacteria,1MUS4@1224|Proteobacteria,42QX0@68525|delta/epsilon subdivisions,2MT1Z@213481|Bdellovibrionales,2WNBN@28221|Deltaproteobacteria	213481|Bdellovibrionales	J	Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body	rpsE	GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904	-	ko:K02988	ko03010,map03010	M00178,M00179	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_S5,Ribosomal_S5_C
DYD3_k127_1231363_22	1353529.M899_3371	2.712e-39	149.0	COG0256@1|root,COG0256@2|Bacteria,1RGY7@1224|Proteobacteria,42TIT@68525|delta/epsilon subdivisions,2MT98@213481|Bdellovibrionales,2WQ8U@28221|Deltaproteobacteria	213481|Bdellovibrionales	J	This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance	rplR	GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0008097,GO:0015934,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0097159,GO:1901363,GO:1990904	-	ko:K02881	ko03010,map03010	M00178,M00179	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_L18p
DYD3_k127_1231363_9	862908.BMS_3285	2.725e-75	256.0	COG0097@1|root,COG0097@2|Bacteria,1R9YZ@1224|Proteobacteria,42NSE@68525|delta/epsilon subdivisions,2MT1B@213481|Bdellovibrionales,2WN9B@28221|Deltaproteobacteria	213481|Bdellovibrionales	J	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center	rplF	GO:0002181,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904	-	ko:K02933	ko03010,map03010	M00178,M00179	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_L6
DYD3_k127_1231363_17	1353529.M899_3373	2.904e-52	187.0	COG0096@1|root,COG0096@2|Bacteria,1RDG3@1224|Proteobacteria,42SF6@68525|delta/epsilon subdivisions,2MT9X@213481|Bdellovibrionales,2WPDP@28221|Deltaproteobacteria	213481|Bdellovibrionales	J	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit	rpsH	GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015935,GO:0022626,GO:0022627,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904	-	ko:K02994	ko03010,map03010	M00178,M00179	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_S8
DYD3_k127_1231363_27	1112212.JH584235_gene1243	1.785e-31	125.0	COG0199@1|root,COG0199@2|Bacteria,1MZDT@1224|Proteobacteria,2UC01@28211|Alphaproteobacteria,2K53G@204457|Sphingomonadales	204457|Sphingomonadales	J	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site	rpsN	-	-	ko:K02954	ko03010,map03010	M00178,M00179	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_S14
DYD3_k127_1231363_7	1201288.M900_2686	1.81e-84	282.0	COG0094@1|root,COG0094@2|Bacteria,1MUU9@1224|Proteobacteria,42QS6@68525|delta/epsilon subdivisions,2MSVT@213481|Bdellovibrionales,2WMPD@28221|Deltaproteobacteria	213481|Bdellovibrionales	J	This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits	rplE	GO:0000027,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904	-	ko:K02931	ko03010,map03010	M00178,M00179	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_L5,Ribosomal_L5_C
DYD3_k127_1231363_28	1353529.M899_3376	3.688e-31	124.0	COG0198@1|root,COG0198@2|Bacteria,1MZQD@1224|Proteobacteria,42TGC@68525|delta/epsilon subdivisions,2WQ2G@28221|Deltaproteobacteria	28221|Deltaproteobacteria	J	One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit	rplX	GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904	-	ko:K02895	ko03010,map03010	M00178,M00179	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	KOW,ribosomal_L24
DYD3_k127_1231363_15	1201290.M902_1663	1.361e-57	202.0	COG0093@1|root,COG0093@2|Bacteria,1RCWZ@1224|Proteobacteria,42RHR@68525|delta/epsilon subdivisions,2MT06@213481|Bdellovibrionales,2WNEK@28221|Deltaproteobacteria	213481|Bdellovibrionales	J	Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome	rplN	GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0070180,GO:0097159,GO:1901363,GO:1990904	-	ko:K02874	ko03010,map03010	M00178,M00179	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_L14
DYD3_k127_1231363_31	1353529.M899_3378	1.039e-22	99.0	COG0186@1|root,COG0186@2|Bacteria,1MZIK@1224|Proteobacteria,42TNS@68525|delta/epsilon subdivisions,2MTBX@213481|Bdellovibrionales,2WR6G@28221|Deltaproteobacteria	213481|Bdellovibrionales	J	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA	rpsQ	GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904	-	ko:K02961	ko03010,map03010	M00178,M00179	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_S17
DYD3_k127_1231363_36	1353529.M899_3379	1.245e-08	58.0	COG0255@1|root,COG0255@2|Bacteria	2|Bacteria	J	Belongs to the universal ribosomal protein uL29 family	rpmC	GO:0000027,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0040007,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:1901564,GO:1901566,GO:1901576,GO:1990904	-	ko:K02904	ko03010,map03010	M00178,M00179	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_L29
DYD3_k127_1231363_13	1201290.M902_1660	1.825e-58	206.0	COG0197@1|root,COG0197@2|Bacteria,1RA0Z@1224|Proteobacteria,42QW5@68525|delta/epsilon subdivisions,2MT69@213481|Bdellovibrionales,2WP71@28221|Deltaproteobacteria	213481|Bdellovibrionales	J	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs	rplP	GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0097159,GO:1901363,GO:1990904	-	ko:K02878	ko03010,map03010	M00178	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_L16
DYD3_k127_1231363_5	1353529.M899_3381	1.491e-103	339.0	COG0092@1|root,COG0092@2|Bacteria,1MUAI@1224|Proteobacteria,42N5W@68525|delta/epsilon subdivisions,2MSWA@213481|Bdellovibrionales,2WIU3@28221|Deltaproteobacteria	213481|Bdellovibrionales	J	Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation	rpsC	GO:0002181,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904	-	ko:K02982	ko03010,map03010	M00178,M00179	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	KH_2,Ribosomal_S3_C
DYD3_k127_1231363_19	1201290.M902_1658	2.028e-43	160.0	COG0091@1|root,COG0091@2|Bacteria,1RH0W@1224|Proteobacteria,42TRE@68525|delta/epsilon subdivisions,2MT7U@213481|Bdellovibrionales,2WQBH@28221|Deltaproteobacteria	213481|Bdellovibrionales	J	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome	rplV	GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904	-	ko:K02890	ko03010,map03010	M00178,M00179	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_L22
DYD3_k127_1231363_21	1201288.M900_2694	2.465e-39	147.0	COG0185@1|root,COG0185@2|Bacteria,1RGYX@1224|Proteobacteria,42THY@68525|delta/epsilon subdivisions,2MU57@213481|Bdellovibrionales,2WQ0F@28221|Deltaproteobacteria	213481|Bdellovibrionales	J	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA	rpsS	GO:0000028,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006996,GO:0008150,GO:0009987,GO:0015935,GO:0016043,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0042254,GO:0042255,GO:0042274,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043933,GO:0044085,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071826,GO:0071840,GO:1990904	-	ko:K02965	ko03010,map03010	M00178,M00179	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_S19
DYD3_k127_1231363_4	862908.BMS_3298	1.134e-130	421.0	COG0090@1|root,COG0090@2|Bacteria,1MVTD@1224|Proteobacteria,42MBV@68525|delta/epsilon subdivisions,2MSN8@213481|Bdellovibrionales,2WIRE@28221|Deltaproteobacteria	213481|Bdellovibrionales	J	One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity	rplB	GO:0002181,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904	-	ko:K02886	ko03010,map03010	M00178,M00179	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_L2,Ribosomal_L2_C
DYD3_k127_1231363_25	862908.BMS_3299	7.499e-34	132.0	COG0089@1|root,COG0089@2|Bacteria,1MZXX@1224|Proteobacteria,42V3Y@68525|delta/epsilon subdivisions,2MTDB@213481|Bdellovibrionales,2WRMX@28221|Deltaproteobacteria	213481|Bdellovibrionales	J	One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome	rplW	GO:0000027,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904	-	ko:K02892	ko03010,map03010	M00178,M00179	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_L23
DYD3_k127_1231363_8	1353529.M899_3386	8.608e-79	267.0	COG0088@1|root,COG0088@2|Bacteria,1MXPF@1224|Proteobacteria,42MPW@68525|delta/epsilon subdivisions,2MT1E@213481|Bdellovibrionales,2WN96@28221|Deltaproteobacteria	213481|Bdellovibrionales	J	One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome	rplD	GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904	-	ko:K02926	ko03010,map03010	M00178	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_L4
DYD3_k127_1231363_6	1353529.M899_3387	4.212e-94	312.0	COG0087@1|root,COG0087@2|Bacteria,1MUST@1224|Proteobacteria,42NV2@68525|delta/epsilon subdivisions,2MT15@213481|Bdellovibrionales,2WNJ1@28221|Deltaproteobacteria	213481|Bdellovibrionales	J	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit	rplC	-	-	ko:K02906	ko03010,map03010	M00178,M00179	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_L3
DYD3_k127_1231363_23	1353529.M899_3388	1.163e-38	144.0	COG0051@1|root,COG0051@2|Bacteria,1RGWF@1224|Proteobacteria,42SE4@68525|delta/epsilon subdivisions,2MT1F@213481|Bdellovibrionales,2WP4K@28221|Deltaproteobacteria	213481|Bdellovibrionales	J	Involved in the binding of tRNA to the ribosomes	rpsJ	GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904	-	ko:K02946	ko03010,map03010	M00178,M00179	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_S10
DYD3_k127_1237791_3	862908.BMS_3376	5.041e-41	153.0	COG0316@1|root,COG0316@2|Bacteria,1RHCW@1224|Proteobacteria,431E6@68525|delta/epsilon subdivisions,2MT88@213481|Bdellovibrionales,2WWGA@28221|Deltaproteobacteria	213481|Bdellovibrionales	S	Belongs to the HesB IscA family	-	-	-	ko:K13628	-	-	-	-	ko00000,ko03016	-	-	-	Fe-S_biosyn
DYD3_k127_1237791_1	862908.BMS_3375	4.403e-86	303.0	COG0354@1|root,COG0457@1|root,COG3071@1|root,COG0354@2|Bacteria,COG0457@2|Bacteria,COG3071@2|Bacteria,1QYGE@1224|Proteobacteria,43CCJ@68525|delta/epsilon subdivisions,2WYDB@28221|Deltaproteobacteria	28221|Deltaproteobacteria	H	Belongs to the GcvT family	ygfZ	-	-	ko:K06980	-	-	-	-	ko00000,ko03016	-	-	-	GCV_T,GCV_T_C
DYD3_k127_1237791_5	1321778.HMPREF1982_03361	1.733e-07	59.0	COG1670@1|root,COG1670@2|Bacteria,1UW2S@1239|Firmicutes,24KS5@186801|Clostridia	186801|Clostridia	J	Acetyltransferase (GNAT) domain	-	-	2.3.1.128	ko:K03790	-	-	-	-	ko00000,ko01000,ko03009	-	-	-	Acetyltransf_3
DYD3_k127_1237791_4	1201290.M902_1811	5.805e-20	100.0	COG3093@1|root,COG3093@2|Bacteria,1NY3A@1224|Proteobacteria,430HJ@68525|delta/epsilon subdivisions,2MU3K@213481|Bdellovibrionales,2WW4H@28221|Deltaproteobacteria	213481|Bdellovibrionales	K	Domain of unknown function (DUF4423)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4423,HTH_3
DYD3_k127_1237791_0	1201288.M900_2753	1.114e-132	430.0	COG3138@1|root,COG3138@2|Bacteria,1MWHC@1224|Proteobacteria,42SUP@68525|delta/epsilon subdivisions,2MSRG@213481|Bdellovibrionales,2WPBD@28221|Deltaproteobacteria	213481|Bdellovibrionales	E	N-succinyltransferase beta subunit	astA	-	2.3.1.109	ko:K00673	ko00330,ko01100,map00330,map01100	-	R00832	RC00004,RC00064	ko00000,ko00001,ko01000	-	-	-	AstA
DYD3_k127_1238539_6	1201290.M902_3130	1.498e-102	341.0	COG0501@1|root,COG0501@2|Bacteria,1NF76@1224|Proteobacteria,42WFB@68525|delta/epsilon subdivisions,2MTHK@213481|Bdellovibrionales,2WSAI@28221|Deltaproteobacteria	213481|Bdellovibrionales	O	Belongs to the peptidase M48B family	-	-	-	-	-	-	-	-	-	-	-	-	Peptidase_M48
DYD3_k127_1238539_7	1353529.M899_1590	1.257e-98	329.0	COG0501@1|root,COG0501@2|Bacteria,1NF76@1224|Proteobacteria,42WFB@68525|delta/epsilon subdivisions,2MTHK@213481|Bdellovibrionales,2WSAI@28221|Deltaproteobacteria	213481|Bdellovibrionales	O	Belongs to the peptidase M48B family	-	-	-	-	-	-	-	-	-	-	-	-	Peptidase_M48
DYD3_k127_1238539_10	264462.Bd1657	1.386e-52	202.0	COG4191@1|root,COG4191@2|Bacteria,1RCM9@1224|Proteobacteria,42MC4@68525|delta/epsilon subdivisions,2MSXW@213481|Bdellovibrionales,2WIZU@28221|Deltaproteobacteria	213481|Bdellovibrionales	T	Histidine kinase A domain protein	-	-	-	-	-	-	-	-	-	-	-	-	ABC_sub_bind,HATPase_c,HisKA,PAS_3,PAS_4,PAS_9,Response_reg
DYD3_k127_1238539_1	1201288.M900_A0422	5.612e-247	772.0	COG4108@1|root,COG4108@2|Bacteria,1MU7X@1224|Proteobacteria,42MAA@68525|delta/epsilon subdivisions,2MSTP@213481|Bdellovibrionales,2WJZC@28221|Deltaproteobacteria	213481|Bdellovibrionales	J	Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP	prfC	GO:0003674,GO:0003676,GO:0003723,GO:0003747,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006412,GO:0006415,GO:0006518,GO:0006807,GO:0008079,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016043,GO:0016150,GO:0019538,GO:0022411,GO:0032984,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043624,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576	-	ko:K02837	-	-	-	-	ko00000,ko03012	-	-	-	GTP_EFTU,GTP_EFTU_D2,RF3_C
DYD3_k127_1238539_13	264462.Bd1657	1.645e-49	194.0	COG4191@1|root,COG4191@2|Bacteria,1RCM9@1224|Proteobacteria,42MC4@68525|delta/epsilon subdivisions,2MSXW@213481|Bdellovibrionales,2WIZU@28221|Deltaproteobacteria	213481|Bdellovibrionales	T	Histidine kinase A domain protein	-	-	-	-	-	-	-	-	-	-	-	-	ABC_sub_bind,HATPase_c,HisKA,PAS_3,PAS_4,PAS_9,Response_reg
DYD3_k127_1238539_0	1353529.M899_1685	0.0	1218.0	COG0403@1|root,COG1003@1|root,COG0403@2|Bacteria,COG1003@2|Bacteria,1MUDP@1224|Proteobacteria,42MR9@68525|delta/epsilon subdivisions,2MSPB@213481|Bdellovibrionales,2WIP3@28221|Deltaproteobacteria	213481|Bdellovibrionales	E	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor	gcvP	-	1.4.4.2	ko:K00281,ko:K00283	ko00260,ko00630,ko01100,ko01110,ko01130,ko01200,map00260,map00630,map01100,map01110,map01130,map01200	M00532	R01221,R03425	RC00022,RC00929,RC02834,RC02880	ko00000,ko00001,ko00002,ko01000	-	-	-	Aminotran_5,GDC-P
DYD3_k127_1238539_15	765914.ThisiDRAFT_0585	6.411e-33	137.0	COG0742@1|root,COG0742@2|Bacteria,1MX8Z@1224|Proteobacteria,1RMIB@1236|Gammaproteobacteria,1WYUS@135613|Chromatiales	135613|Chromatiales	J	Specifically methylates the guanosine in position 1516 of 16S rRNA	rsmJ	-	2.1.1.242	ko:K15984	-	-	-	-	ko00000,ko01000,ko03009	-	-	-	SAM_MT
DYD3_k127_1238539_4	1123057.P872_23320	5.996e-126	411.0	COG0524@1|root,COG0524@2|Bacteria,4NIHI@976|Bacteroidetes,47NUW@768503|Cytophagia	976|Bacteroidetes	G	Belongs to the carbohydrate kinase PfkB family	-	-	-	-	-	-	-	-	-	-	-	-	PfkB
DYD3_k127_1238539_2	36874.HQ34_03875	5.389e-168	539.0	COG0017@1|root,COG0017@2|Bacteria,4NDY4@976|Bacteroidetes,2FKYI@200643|Bacteroidia,22XA5@171551|Porphyromonadaceae	976|Bacteroidetes	J	Asparaginyl-tRNA synthetase	asnS	-	6.1.1.22	ko:K01893	ko00970,map00970	M00359,M00360	R03648	RC00055,RC00523	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	-	-	-	tRNA-synt_2,tRNA_anti-codon
DYD3_k127_1238539_12	1444309.JAQG01000021_gene1364	4.508e-52	197.0	COG2202@1|root,COG3852@1|root,COG2202@2|Bacteria,COG3852@2|Bacteria,1TRH0@1239|Firmicutes,4HD4A@91061|Bacilli,2779W@186822|Paenibacillaceae	91061|Bacilli	T	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)	-	-	2.7.13.3	ko:K02491	ko02020,map02020	M00485	-	-	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	-	-	-	HATPase_c,HisKA,PAS,PAS_3,PAS_4,PAS_9
DYD3_k127_1238539_19	431943.CKL_1634	3.916e-08	61.0	COG2340@1|root,COG2340@2|Bacteria,1V6GZ@1239|Firmicutes,24BAQ@186801|Clostridia,36FMJ@31979|Clostridiaceae	186801|Clostridia	M	PFAM Cysteine-rich secretory protein family	-	-	-	-	-	-	-	-	-	-	-	-	CAP
DYD3_k127_1238539_8	862908.BMS_1834	3.444e-88	326.0	COG0419@1|root,COG0419@2|Bacteria,1MVTQ@1224|Proteobacteria,42NVV@68525|delta/epsilon subdivisions,2WJIZ@28221|Deltaproteobacteria	28221|Deltaproteobacteria	L	ATPase involved in DNA repair	sbcC	-	-	ko:K03546	-	-	-	-	ko00000,ko03400	-	-	-	AAA_23,SbcCD_C
DYD3_k127_1238539_11	926549.KI421517_gene1994	3.371e-52	200.0	COG0420@1|root,COG0420@2|Bacteria,4NEET@976|Bacteroidetes,47MGK@768503|Cytophagia	976|Bacteroidetes	L	SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'- 5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity	sbcD	-	-	ko:K03547	-	-	-	-	ko00000,ko03400	-	-	-	Metallophos,SbcD_C
DYD3_k127_1238539_5	862908.BMS_1832	3.097e-115	389.0	COG1774@1|root,COG1774@2|Bacteria,1MZBX@1224|Proteobacteria,42NE3@68525|delta/epsilon subdivisions,2WK98@28221|Deltaproteobacteria	28221|Deltaproteobacteria	D	PFAM PSP1 domain protein	-	-	-	-	-	-	-	-	-	-	-	-	PSP1
DYD3_k127_1238539_18	862908.BMS_1831	1.849e-16	89.0	COG0470@1|root,COG0470@2|Bacteria	2|Bacteria	L	replication factor c	holB	-	2.7.7.7	ko:K02341,ko:K02343	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	M00260	R00375,R00376,R00377,R00378	RC02795	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	-	-	-	DNA_pol3_delta2,DNApol3-delta_C
DYD3_k127_1238539_9	1353529.M899_1856	1.99e-64	227.0	COG0125@1|root,COG0125@2|Bacteria,1MV9C@1224|Proteobacteria,42RK3@68525|delta/epsilon subdivisions,2MTAI@213481|Bdellovibrionales,2WNES@28221|Deltaproteobacteria	213481|Bdellovibrionales	F	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis	tmk	GO:0003674,GO:0003824,GO:0004798,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006220,GO:0006221,GO:0006227,GO:0006233,GO:0006235,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009041,GO:0009058,GO:0009117,GO:0009123,GO:0009132,GO:0009133,GO:0009138,GO:0009139,GO:0009141,GO:0009142,GO:0009147,GO:0009148,GO:0009165,GO:0009186,GO:0009189,GO:0009196,GO:0009197,GO:0009200,GO:0009202,GO:0009211,GO:0009212,GO:0009219,GO:0009221,GO:0009262,GO:0009263,GO:0009265,GO:0009394,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019692,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046072,GO:0046075,GO:0046077,GO:0046385,GO:0046483,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576	2.7.4.9	ko:K00943	ko00240,ko01100,map00240,map01100	M00053	R02094,R02098	RC00002	ko00000,ko00001,ko00002,ko01000	-	-	-	Thymidylate_kin
DYD3_k127_1238539_14	1201290.M902_3281	2.349e-47	176.0	COG2166@1|root,COG2166@2|Bacteria,1RI8F@1224|Proteobacteria,42VMV@68525|delta/epsilon subdivisions,2MT50@213481|Bdellovibrionales,2WVZF@28221|Deltaproteobacteria	213481|Bdellovibrionales	S	Regulator of cysteine desulfurase activity	sufE	-	-	ko:K02426	-	-	-	-	ko00000	-	-	-	SufE
DYD3_k127_1238539_3	1353529.M899_1982	1.302e-137	444.0	COG0113@1|root,COG0113@2|Bacteria,1MWMW@1224|Proteobacteria,42N17@68525|delta/epsilon subdivisions,2MSRX@213481|Bdellovibrionales,2WJE8@28221|Deltaproteobacteria	213481|Bdellovibrionales	H	Belongs to the ALAD family	hemB	-	4.2.1.24	ko:K01698	ko00860,ko01100,ko01110,ko01120,map00860,map01100,map01110,map01120	M00121	R00036	RC00918,RC01781	ko00000,ko00001,ko00002,ko01000,ko04147	-	-	-	ALAD
DYD3_k127_1238539_16	1321779.HMPREF1984_01673	3.859e-32	138.0	COG0859@1|root,COG0859@2|Bacteria,378YY@32066|Fusobacteria	32066|Fusobacteria	M	heptosyltransferase	-	-	-	-	-	-	-	-	-	-	-	-	Glyco_transf_9
DYD3_k127_1249573_8	1266925.JHVX01000001_gene2795	0.0003376	52.0	COG1538@1|root,COG1538@2|Bacteria,1R744@1224|Proteobacteria,2VWZ3@28216|Betaproteobacteria,372WK@32003|Nitrosomonadales	28216|Betaproteobacteria	MU	Outer membrane efflux protein	-	-	-	ko:K15725	-	-	-	-	ko00000,ko02000	1.B.17.2.2	-	-	OEP
DYD3_k127_1249573_7	404589.Anae109_3914	7.137e-31	128.0	COG2771@1|root,COG2771@2|Bacteria,1QU5E@1224|Proteobacteria,4319G@68525|delta/epsilon subdivisions,2WWCU@28221|Deltaproteobacteria,2Z1AC@29|Myxococcales	28221|Deltaproteobacteria	K	helix_turn_helix, Lux Regulon	-	-	-	-	-	-	-	-	-	-	-	-	GerE
DYD3_k127_1249573_6	264462.Bd3645	9.477e-34	132.0	COG3695@1|root,COG3695@2|Bacteria,1N7J2@1224|Proteobacteria,42VQ4@68525|delta/epsilon subdivisions,2MUBW@213481|Bdellovibrionales,2WS47@28221|Deltaproteobacteria	213481|Bdellovibrionales	L	PFAM Methylated-DNA- protein -cysteine	-	-	-	ko:K07443	-	-	-	-	ko00000	-	-	-	DNA_binding_1
DYD3_k127_1249573_2	264462.Bd2408	9.157e-62	218.0	COG1396@1|root,COG1917@1|root,COG1396@2|Bacteria,COG1917@2|Bacteria,1N34Y@1224|Proteobacteria,42TV3@68525|delta/epsilon subdivisions,2WQ5Z@28221|Deltaproteobacteria	28221|Deltaproteobacteria	K	DNA-binding protein	-	-	-	-	-	-	-	-	-	-	-	-	Cupin_2,HTH_31
DYD3_k127_1249573_3	243233.MCA2966	1.091e-50	191.0	COG3748@1|root,COG3748@2|Bacteria,1RFIZ@1224|Proteobacteria,1S8F8@1236|Gammaproteobacteria,1XEI4@135618|Methylococcales	135618|Methylococcales	S	Urate oxidase N-terminal	-	-	-	-	-	-	-	-	-	-	-	-	Urate_ox_N
DYD3_k127_1249573_0	1353529.M899_0512	1.161e-177	564.0	COG0441@1|root,COG0441@2|Bacteria,1MUP2@1224|Proteobacteria,42M20@68525|delta/epsilon subdivisions,2MSS5@213481|Bdellovibrionales,2WJ2N@28221|Deltaproteobacteria	213481|Bdellovibrionales	J	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)	thrS	GO:0003674,GO:0003824,GO:0004812,GO:0004829,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006435,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576	6.1.1.3	ko:K01868	ko00970,map00970	M00359,M00360	R03663	RC00055,RC00523	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	-	-	-	HGTP_anticodon,TGS,tRNA-synt_2b,tRNA_SAD
DYD3_k127_1249573_1	862908.BMS_2564	1.726e-74	273.0	COG0457@1|root,COG0457@2|Bacteria	862908.BMS_2564|-	S	peptidyl-tyrosine sulfation	-	-	-	ko:K09859	-	-	-	-	ko00000	-	-	-	-
DYD3_k127_1249573_4	1201288.M900_1250	1.267e-46	181.0	COG1475@1|root,COG1475@2|Bacteria	2|Bacteria	K	chromosome segregation	VVA1695	-	-	ko:K03497	-	-	-	-	ko00000,ko03000,ko03036,ko04812	-	-	-	MT-A70,ParBc
DYD3_k127_1249573_5	395492.Rleg2_4342	1.069e-39	149.0	COG0783@1|root,COG0783@2|Bacteria,1RAC5@1224|Proteobacteria,2U5Q5@28211|Alphaproteobacteria,4B6XH@82115|Rhizobiaceae	28211|Alphaproteobacteria	P	Belongs to the Dps family	-	-	-	ko:K04047	-	-	-	-	ko00000,ko03036	-	-	-	Ferritin
DYD3_k127_1322522_1	1123058.KB894240_gene2036	1.876e-98	336.0	COG0038@1|root,COG0038@2|Bacteria,4NFCF@976|Bacteroidetes,1HWJE@117743|Flavobacteriia	976|Bacteroidetes	P	Chloride channel protein	-	-	-	ko:K03281	-	-	-	-	ko00000	2.A.49	-	-	TrkA_C,Voltage_CLC
DYD3_k127_1322522_4	1201288.M900_2136	3.71e-11	69.0	COG4968@1|root,COG4968@2|Bacteria	2|Bacteria	NU	Prokaryotic N-terminal methylation motif	-	-	-	ko:K02456,ko:K02457,ko:K02458,ko:K02459,ko:K02655,ko:K10926	ko03070,ko05111,map03070,map05111	M00331	-	-	ko00000,ko00001,ko00002,ko02035,ko02044	3.A.15,3.A.15.2	-	-	ComP_DUS,N_methyl,T2SSJ
DYD3_k127_1322522_2	862908.BMS_3220	1.679e-58	210.0	COG0127@1|root,COG0127@2|Bacteria,1MUK5@1224|Proteobacteria,42NGT@68525|delta/epsilon subdivisions,2MT7D@213481|Bdellovibrionales,2WK3E@28221|Deltaproteobacteria	213481|Bdellovibrionales	F	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions	rdgB	GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009141,GO:0009143,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046434,GO:0046483,GO:0046700,GO:0047429,GO:0055086,GO:0071704,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901575,GO:1901576	3.6.1.66	ko:K02428	ko00230,map00230	-	R00426,R00720,R01855,R02100,R02720,R03531	RC00002	ko00000,ko00001,ko01000	-	-	iAF987.Gmet_1875	Ham1p_like
DYD3_k127_1322522_0	1353529.M899_3306	2.487e-109	357.0	COG0689@1|root,COG0689@2|Bacteria,1MVFZ@1224|Proteobacteria,42NEX@68525|delta/epsilon subdivisions,2MSYC@213481|Bdellovibrionales,2WJ1Y@28221|Deltaproteobacteria	213481|Bdellovibrionales	J	Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates	rph	GO:0006139,GO:0006401,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009987,GO:0016070,GO:0016072,GO:0016075,GO:0019439,GO:0034641,GO:0034655,GO:0034660,GO:0034661,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0046483,GO:0046700,GO:0071704,GO:0090304,GO:1901360,GO:1901361,GO:1901575	2.7.7.56	ko:K00989	-	-	-	-	ko00000,ko01000,ko03016	-	-	-	RNase_PH,RNase_PH_C
DYD3_k127_1322522_3	862908.BMS_3222	6.836e-20	92.0	COG0340@1|root,COG0340@2|Bacteria	2|Bacteria	H	biotin-[acetyl-CoA-carboxylase] ligase activity	birA	-	6.3.4.15	ko:K03523,ko:K03524	ko00780,ko01100,ko02010,map00780,map01100,map02010	M00581,M00582	R01074,R05145	RC00043,RC00070,RC00096,RC02896	ko00000,ko00001,ko00002,ko01000,ko02000,ko03000	2.A.88.1,2.A.88.2	-	-	BPL_C,BPL_LplA_LipB
DYD3_k127_1334644_2	1353529.M899_1714	2.691e-61	218.0	COG1974@1|root,COG1974@2|Bacteria,1MW80@1224|Proteobacteria,42PAH@68525|delta/epsilon subdivisions,2MT31@213481|Bdellovibrionales,2WKSM@28221|Deltaproteobacteria	213481|Bdellovibrionales	K	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair	lexA	-	3.4.21.88	ko:K01356,ko:K03503	-	M00729	-	-	ko00000,ko00002,ko01000,ko01002,ko03400	-	-	-	LexA_DNA_bind,Peptidase_S24
DYD3_k127_1334644_0	1201290.M902_0375	6.057e-100	334.0	COG0535@1|root,COG0535@2|Bacteria,1N2I6@1224|Proteobacteria,42P9K@68525|delta/epsilon subdivisions,2MSVJ@213481|Bdellovibrionales,2WQ2D@28221|Deltaproteobacteria	213481|Bdellovibrionales	C	Iron-sulfur cluster-binding domain	-	-	-	-	-	-	-	-	-	-	-	-	Radical_SAM,SPASM
DYD3_k127_1334644_3	1201290.M902_0625	1.766e-60	213.0	COG0782@1|root,COG0782@2|Bacteria,1RAP0@1224|Proteobacteria,42UCT@68525|delta/epsilon subdivisions,2MT1X@213481|Bdellovibrionales,2WPAW@28221|Deltaproteobacteria	213481|Bdellovibrionales	K	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus	greB	-	-	ko:K04760	-	-	-	-	ko00000,ko03021	-	-	-	GreA_GreB,GreA_GreB_N
DYD3_k127_1334644_7	215803.DB30_4667	0.0002572	51.0	2DJS1@1|root,30745@2|Bacteria,1Q2J3@1224|Proteobacteria,4385Y@68525|delta/epsilon subdivisions,2X3FS@28221|Deltaproteobacteria,2YVWX@29|Myxococcales	28221|Deltaproteobacteria	S	Membrane bound O-acyl transferase family	-	-	-	-	-	-	-	-	-	-	-	-	MBOAT_2
DYD3_k127_1334644_4	862908.BMS_1123	2.707e-54	205.0	COG0665@1|root,COG0665@2|Bacteria,1MVGP@1224|Proteobacteria,42UMU@68525|delta/epsilon subdivisions,2MSSJ@213481|Bdellovibrionales,2WRRN@28221|Deltaproteobacteria	213481|Bdellovibrionales	C	Thi4 family	-	-	-	-	-	-	-	-	-	-	-	-	DAO
DYD3_k127_1334644_1	862908.BMS_0153	1.743e-87	302.0	COG4166@1|root,COG4166@2|Bacteria,1P91R@1224|Proteobacteria,42Z5J@68525|delta/epsilon subdivisions,2X7Z6@28221|Deltaproteobacteria	28221|Deltaproteobacteria	E	Bacterial extracellular solute-binding proteins, family 5 Middle	-	-	-	ko:K13893	ko02010,map02010	M00349	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.5.21,3.A.1.5.24	-	-	SBP_bac_5
DYD3_k127_1360331_1	1230343.CANP01000049_gene3745	3.617e-33	136.0	COG0642@1|root,COG4191@1|root,COG2205@2|Bacteria,COG4191@2|Bacteria,1NZ3M@1224|Proteobacteria,1T4YX@1236|Gammaproteobacteria,1JCKX@118969|Legionellales	118969|Legionellales	T	His Kinase A (phosphoacceptor) domain	-	-	-	-	-	-	-	-	-	-	-	-	HATPase_c
DYD3_k127_1360331_2	1348583.ATLH01000031_gene1893	4.75e-11	75.0	COG2202@1|root,COG3452@1|root,COG4251@1|root,COG2202@2|Bacteria,COG3452@2|Bacteria,COG4251@2|Bacteria,4PI9N@976|Bacteroidetes,1IFYE@117743|Flavobacteriia,1FA7G@104264|Cellulophaga	976|Bacteroidetes	T	CHASE	-	-	-	-	-	-	-	-	-	-	-	-	CHASE,HATPase_c,HisKA,PAS,PAS_3,PAS_9
DYD3_k127_1360331_0	264462.Bd1657	2.355e-55	215.0	COG4191@1|root,COG4191@2|Bacteria,1RCM9@1224|Proteobacteria,42MC4@68525|delta/epsilon subdivisions,2MSXW@213481|Bdellovibrionales,2WIZU@28221|Deltaproteobacteria	213481|Bdellovibrionales	T	Histidine kinase A domain protein	-	-	-	-	-	-	-	-	-	-	-	-	ABC_sub_bind,HATPase_c,HisKA,PAS_3,PAS_4,PAS_9,Response_reg
DYD3_k127_1363138_6	568768.CM001975_gene526	4.835e-56	209.0	COG1477@1|root,COG1477@2|Bacteria,1MW6K@1224|Proteobacteria,1RNMZ@1236|Gammaproteobacteria,2JE0F@204037|Dickeya	1236|Gammaproteobacteria	M	Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein	apbE	GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009897,GO:0009986,GO:0009987,GO:0016020,GO:0016740,GO:0017013,GO:0019538,GO:0030288,GO:0030313,GO:0031224,GO:0031226,GO:0031233,GO:0031237,GO:0031975,GO:0036094,GO:0036211,GO:0042597,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044425,GO:0044459,GO:0044464,GO:0046872,GO:0048037,GO:0050660,GO:0050662,GO:0071704,GO:0071944,GO:0071949,GO:0097159,GO:0098552,GO:0098567,GO:1901265,GO:1901363,GO:1901564	2.7.1.180	ko:K03734	-	-	-	-	ko00000,ko01000	-	-	-	ApbE
DYD3_k127_1363138_0	862908.BMS_2269	1.274e-211	662.0	COG2871@1|root,COG2871@2|Bacteria,1QTUV@1224|Proteobacteria,42MXC@68525|delta/epsilon subdivisions,2MTCC@213481|Bdellovibrionales,2WJJF@28221|Deltaproteobacteria	213481|Bdellovibrionales	C	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. The first step is catalyzed by NqrF, which accepts electrons from NADH and reduces ubiquinone-1 to ubisemiquinone by a one-electron transfer pathway	nqrF	-	1.6.5.8	ko:K00351	-	-	-	-	ko00000,ko01000	-	-	-	FAD_binding_6,Fer2,NAD_binding_1
DYD3_k127_1363138_3	1168065.DOK_04462	1.021e-100	331.0	COG2209@1|root,COG2209@2|Bacteria,1R33S@1224|Proteobacteria,1RMWV@1236|Gammaproteobacteria,1J5JH@118884|unclassified Gammaproteobacteria	1236|Gammaproteobacteria	C	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol	nqrE	GO:0003674,GO:0003824,GO:0003954,GO:0005575,GO:0006810,GO:0006811,GO:0006812,GO:0006814,GO:0008137,GO:0008150,GO:0008152,GO:0015672,GO:0016020,GO:0016491,GO:0016651,GO:0016655,GO:0030001,GO:0030964,GO:0032991,GO:0044425,GO:0050136,GO:0051179,GO:0051234,GO:0055114,GO:0098796,GO:1902494	1.6.5.8	ko:K00350	-	-	-	-	ko00000,ko01000	-	-	-	Rnf-Nqr
DYD3_k127_1363138_4	1232683.ADIMK_3669	1.156e-82	279.0	COG1347@1|root,COG1347@2|Bacteria,1MUZR@1224|Proteobacteria,1RNFE@1236|Gammaproteobacteria,46413@72275|Alteromonadaceae	1236|Gammaproteobacteria	C	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol	nqrD	GO:0003674,GO:0003824,GO:0003954,GO:0005575,GO:0005623,GO:0005886,GO:0006091,GO:0006119,GO:0006120,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0006814,GO:0008137,GO:0008150,GO:0008152,GO:0009117,GO:0009123,GO:0009126,GO:0009141,GO:0009144,GO:0009150,GO:0009161,GO:0009167,GO:0009199,GO:0009205,GO:0009259,GO:0009987,GO:0015672,GO:0015980,GO:0016020,GO:0016310,GO:0016491,GO:0016651,GO:0016655,GO:0017144,GO:0019637,GO:0019693,GO:0022900,GO:0022904,GO:0030001,GO:0030964,GO:0032991,GO:0034641,GO:0042773,GO:0042775,GO:0044237,GO:0044238,GO:0044281,GO:0044425,GO:0044464,GO:0045333,GO:0046034,GO:0046483,GO:0050136,GO:0051179,GO:0051234,GO:0055086,GO:0055114,GO:0071704,GO:0071944,GO:0072521,GO:0098796,GO:1901135,GO:1901360,GO:1901564,GO:1902494	1.6.5.8	ko:K00349	-	-	-	-	ko00000,ko01000	-	-	-	Rnf-Nqr
DYD3_k127_1363138_5	1323663.AROI01000009_gene3601	5.887e-78	268.0	COG2869@1|root,COG2869@2|Bacteria,1MVDI@1224|Proteobacteria,1RR85@1236|Gammaproteobacteria	1236|Gammaproteobacteria	C	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol	nqrC	-	1.6.5.8	ko:K00348	-	-	-	-	ko00000,ko01000	-	-	-	FMN_bind
DYD3_k127_1363138_1	1201288.M900_1797	1.45e-164	526.0	COG4658@1|root,COG4658@2|Bacteria,1MVY6@1224|Proteobacteria,42MTU@68525|delta/epsilon subdivisions,2WKN8@28221|Deltaproteobacteria	28221|Deltaproteobacteria	C	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol	nqrB	-	1.6.5.8	ko:K00347	-	-	-	-	ko00000,ko01000	-	-	-	NQR2_RnfD_RnfE
DYD3_k127_1363138_2	1201288.M900_1798	1.276e-162	524.0	COG1726@1|root,COG1726@2|Bacteria,1MU36@1224|Proteobacteria,42PMT@68525|delta/epsilon subdivisions,2WK84@28221|Deltaproteobacteria	28221|Deltaproteobacteria	C	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol	nqrA	-	1.6.5.8	ko:K00346	-	-	-	-	ko00000,ko01000	-	-	-	Fer4_10,NQRA,NQRA_SLBB
DYD3_k127_1366792_4	1250006.JHZZ01000001_gene1973	4.391e-36	145.0	COG3000@1|root,COG3000@2|Bacteria,4NMV7@976|Bacteroidetes,1I0S1@117743|Flavobacteriia	976|Bacteroidetes	I	Fatty acid hydroxylase	-	-	-	-	-	-	-	-	-	-	-	-	FA_hydroxylase
DYD3_k127_1366792_3	1122176.KB903531_gene3128	7.054e-44	170.0	COG3000@1|root,COG3000@2|Bacteria,4NMKR@976|Bacteroidetes,1ISPG@117747|Sphingobacteriia	976|Bacteroidetes	I	Fatty acid hydroxylase superfamily	-	-	-	-	-	-	-	-	-	-	-	-	FA_hydroxylase
DYD3_k127_1366792_2	1250006.JHZZ01000001_gene1972	6.546e-46	176.0	COG0508@1|root,COG0508@2|Bacteria,4NKFG@976|Bacteroidetes	976|Bacteroidetes	C	COGs COG0508 Pyruvate 2-oxoglutarate dehydrogenase complex dihydrolipoamide acyltransferase (E2) protein	-	-	2.3.1.12	ko:K00627	ko00010,ko00020,ko00620,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00020,map00620,map01100,map01110,map01120,map01130,map01200	M00307	R00209,R02569	RC00004,RC02742,RC02857	br01601,ko00000,ko00001,ko00002,ko01000	-	-	-	2-oxoacid_dh
DYD3_k127_1366792_0	1121346.KB899833_gene814	0.0	1283.0	COG1924@1|root,COG3580@1|root,COG1924@2|Bacteria,COG3580@2|Bacteria,1TPU5@1239|Firmicutes,4HCZG@91061|Bacilli,26VQ9@186822|Paenibacillaceae	91061|Bacilli	I	COG1924 Activator of 2-hydroxyglutaryl-CoA dehydratase (HSP70-class ATPase domain)	hgdC	-	-	-	-	-	-	-	-	-	-	-	BcrAD_BadFG,DUF2229,HGD-D
DYD3_k127_1366792_1	1121346.KB899833_gene816	4.908e-93	320.0	COG3581@1|root,COG3581@2|Bacteria,1TRVV@1239|Firmicutes,4HBMZ@91061|Bacilli,26V33@186822|Paenibacillaceae	91061|Bacilli	I	Psort location Cytoplasmic, score	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_1366792_5	349521.HCH_01209	1.557e-30	134.0	COG1404@1|root,COG1404@2|Bacteria	2|Bacteria	O	Belongs to the peptidase S8 family	-	-	-	-	-	-	-	-	-	-	-	-	CotH,LTD,Peptidase_M43,Peptidase_S8,SLH
DYD3_k127_1387065_0	411154.GFO_2182	2.496e-106	354.0	COG2267@1|root,COG2267@2|Bacteria,4NHRM@976|Bacteroidetes,1HZPA@117743|Flavobacteriia	976|Bacteroidetes	I	Alpha beta hydrolase	-	-	-	-	-	-	-	-	-	-	-	-	Abhydrolase_1
DYD3_k127_1387065_1	1353529.M899_2645	1.204e-65	258.0	COG3210@1|root,COG3420@1|root,COG3210@2|Bacteria,COG3420@2|Bacteria,1NED3@1224|Proteobacteria,42WDX@68525|delta/epsilon subdivisions,2MTVC@213481|Bdellovibrionales,2WRDH@28221|Deltaproteobacteria	213481|Bdellovibrionales	U	cell wall surface anchor family protein	-	-	-	-	-	-	-	-	-	-	-	-	Peptidase_S74
DYD3_k127_1387065_2	264462.Bd2734	3.25e-26	128.0	COG2911@1|root,COG2911@2|Bacteria	2|Bacteria	S	protein secretion	-	-	3.2.1.78	ko:K01218	ko00051,ko02024,map00051,map02024	-	R01332	RC00467	ko00000,ko00001,ko01000	-	GH26	-	Big_5,CHU_C,DUF642,Haemagg_act,SprB
DYD3_k127_1387065_3	649638.Trad_1218	1.047e-05	54.0	COG4850@1|root,COG4850@2|Bacteria,1WMEC@1297|Deinococcus-Thermus	1297|Deinococcus-Thermus	S	conserved protein (DUF2183)	-	-	-	-	-	-	-	-	-	-	-	-	DUF2183
DYD3_k127_1433354_0	1242864.D187_003597	2.609e-24	106.0	COG1171@1|root,COG1171@2|Bacteria,1MVWJ@1224|Proteobacteria,42MKY@68525|delta/epsilon subdivisions,2WM9K@28221|Deltaproteobacteria,2YV33@29|Myxococcales	28221|Deltaproteobacteria	E	Threonine dehydratase	ilvA	-	4.3.1.19	ko:K01754	ko00260,ko00290,ko01100,ko01110,ko01130,ko01200,ko01230,map00260,map00290,map01100,map01110,map01130,map01200,map01230	M00570	R00220,R00996	RC00418,RC02600	ko00000,ko00001,ko00002,ko01000	-	-	-	ACT,PALP,Thr_dehydrat_C
DYD3_k127_1433354_1	1201288.M900_0854	8.725e-12	74.0	2ETPI@1|root,33M77@2|Bacteria,1NKAQ@1224|Proteobacteria,433C5@68525|delta/epsilon subdivisions,2MUEJ@213481|Bdellovibrionales,2WXNR@28221|Deltaproteobacteria	213481|Bdellovibrionales	S	Pre-toxin TG	-	-	-	-	-	-	-	-	-	-	-	-	PT-TG
DYD3_k127_1435851_7	1293054.HSACCH_01515	4.569e-08	57.0	COG1285@1|root,COG1285@2|Bacteria,1V409@1239|Firmicutes,249SQ@186801|Clostridia,3WAS3@53433|Halanaerobiales	186801|Clostridia	S	PFAM MgtC SapB transporter	-	-	-	ko:K07507	-	-	-	-	ko00000,ko02000	9.B.20	-	-	MgtC
DYD3_k127_1435851_4	1353529.M899_3244	2.45e-80	293.0	COG1505@1|root,COG1505@2|Bacteria,1NZ7N@1224|Proteobacteria,42NR5@68525|delta/epsilon subdivisions,2WMMK@28221|Deltaproteobacteria	28221|Deltaproteobacteria	E	COG1505 Serine proteases of the peptidase family S9A	pep	-	3.4.21.26	ko:K01322	ko04614,map04614	-	-	-	ko00000,ko00001,ko01000,ko01002	-	-	-	Peptidase_S9,Peptidase_S9_N
DYD3_k127_1435851_0	744872.Spica_2487	1.2e-170	546.0	COG2610@1|root,COG2610@2|Bacteria,2J5W9@203691|Spirochaetes	203691|Spirochaetes	EG	Gluconate	-	-	-	ko:K03299	-	-	-	-	ko00000,ko02000	2.A.8	-	-	GntP_permease
DYD3_k127_1435851_1	1121439.dsat_1613	3.475e-104	351.0	COG2379@1|root,COG2379@2|Bacteria,1MVIK@1224|Proteobacteria,42Q1H@68525|delta/epsilon subdivisions,2WK7W@28221|Deltaproteobacteria,2M8T3@213115|Desulfovibrionales	28221|Deltaproteobacteria	G	pfam mofrl	Glyctk	-	2.7.1.165	ko:K11529	ko00030,ko00260,ko00561,ko00630,ko00680,ko01100,ko01120,ko01130,ko01200,map00030,map00260,map00561,map00630,map00680,map01100,map01120,map01130,map01200	M00346	R08572	RC00002,RC00428	ko00000,ko00001,ko00002,ko01000	-	-	-	DUF4147,MOFRL
DYD3_k127_1435851_3	521000.PROVRETT_05768	1.694e-98	331.0	COG2865@1|root,COG2865@2|Bacteria,1QZ00@1224|Proteobacteria,1T4NH@1236|Gammaproteobacteria	1236|Gammaproteobacteria	K	Domain of unknown function (DUF4062)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4062
DYD3_k127_1435851_2	264462.Bd2673	2.928e-99	332.0	COG4748@1|root,COG4748@2|Bacteria	2|Bacteria	NT	type I restriction enzyme	-	-	-	ko:K07504	-	-	-	-	ko00000	-	-	-	HSDR_N,HSDR_N_2
DYD3_k127_1435851_6	3847.GLYMA13G41761.1	7.627e-09	66.0	COG0318@1|root,KOG3628@2759|Eukaryota,37IHD@33090|Viridiplantae,3GEG9@35493|Streptophyta,4JHBB@91835|fabids	35493|Streptophyta	IQ	Phosphopantetheine attachment site	-	-	-	-	-	-	-	-	-	-	-	-	AMP-binding,Amino_oxidase,Catalase,Hexapep,NAD_binding_8,PP-binding
DYD3_k127_1474744_0	1353529.M899_1968	9.422e-163	516.0	COG1494@1|root,COG1494@2|Bacteria,1MUB1@1224|Proteobacteria,42M34@68525|delta/epsilon subdivisions,2MSKZ@213481|Bdellovibrionales,2WKJ6@28221|Deltaproteobacteria	213481|Bdellovibrionales	G	TIGRFAM fructose-1,6-bisphosphatase, class II	glpX	-	3.1.3.11	ko:K02446	ko00010,ko00030,ko00051,ko00680,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00030,map00051,map00680,map00710,map01100,map01110,map01120,map01130,map01200	M00003,M00165,M00167	R00762,R04780	RC00017	ko00000,ko00001,ko00002,ko01000	-	-	-	FBPase_glpX
DYD3_k127_1474744_4	1201288.M900_A0333	1.26e-41	157.0	COG2867@1|root,COG2867@2|Bacteria,1N0H8@1224|Proteobacteria,42TGW@68525|delta/epsilon subdivisions,2MT8U@213481|Bdellovibrionales,2WQGA@28221|Deltaproteobacteria	213481|Bdellovibrionales	I	Polyketide cyclase / dehydrase and lipid transport	-	-	-	-	-	-	-	-	-	-	-	-	Polyketide_cyc,Polyketide_cyc2
DYD3_k127_1474744_5	1201288.M900_A0334	3.274e-24	105.0	2CIY5@1|root,2ZET1@2|Bacteria,1P8MM@1224|Proteobacteria,4330I@68525|delta/epsilon subdivisions,2MUET@213481|Bdellovibrionales,2WXKY@28221|Deltaproteobacteria	213481|Bdellovibrionales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_1474744_2	862908.BMS_1549	5.298e-52	192.0	COG0325@1|root,COG0325@2|Bacteria,1MWN7@1224|Proteobacteria,42PSG@68525|delta/epsilon subdivisions,2MUCI@213481|Bdellovibrionales,2WKYN@28221|Deltaproteobacteria	213481|Bdellovibrionales	S	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis	-	-	-	ko:K06997	-	-	-	-	ko00000	-	-	-	Ala_racemase_N
DYD3_k127_1474744_1	1353529.M899_1962	2.167e-126	412.0	COG3491@1|root,COG3491@2|Bacteria,1MUNT@1224|Proteobacteria,42QN8@68525|delta/epsilon subdivisions,2MSP0@213481|Bdellovibrionales,2WM0P@28221|Deltaproteobacteria	213481|Bdellovibrionales	C	Belongs to the iron ascorbate-dependent oxidoreductase family	-	-	-	-	-	-	-	-	-	-	-	-	2OG-FeII_Oxy,DIOX_N
DYD3_k127_1474744_6	1116472.MGMO_1c00020	4.19e-21	107.0	COG3209@1|root,COG3292@1|root,COG3391@1|root,COG3209@2|Bacteria,COG3292@2|Bacteria,COG3391@2|Bacteria,1MVV1@1224|Proteobacteria,1RY7B@1236|Gammaproteobacteria,1XGYX@135618|Methylococcales	135618|Methylococcales	M	RHS Repeat	-	-	-	-	-	-	-	-	-	-	-	-	RHS_repeat
DYD3_k127_1523085_0	1201288.M900_2712	8.119e-223	694.0	COG0050@1|root,COG0050@2|Bacteria,1MVC0@1224|Proteobacteria,42MWZ@68525|delta/epsilon subdivisions,2MSMP@213481|Bdellovibrionales,2WJ2B@28221|Deltaproteobacteria	213481|Bdellovibrionales	J	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis	tuf	-	-	ko:K02358	-	-	-	-	ko00000,ko03012,ko03029,ko04147	-	-	-	GTP_EFTU,GTP_EFTU_D2,GTP_EFTU_D3
DYD3_k127_1523085_7	1353529.M899_3405	3.588e-59	213.0	COG0566@1|root,COG0566@2|Bacteria,1MWCM@1224|Proteobacteria,42MZF@68525|delta/epsilon subdivisions,2MTF6@213481|Bdellovibrionales,2WNND@28221|Deltaproteobacteria	213481|Bdellovibrionales	J	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family	rlmB	-	2.1.1.185	ko:K03218	-	-	-	-	ko00000,ko01000,ko03009	-	-	-	SpoU_methylase,SpoU_sub_bind
DYD3_k127_1523085_1	862908.BMS_3324	1.181e-208	663.0	COG0442@1|root,COG0442@2|Bacteria,1MU7E@1224|Proteobacteria,42ME5@68525|delta/epsilon subdivisions,2MSRR@213481|Bdellovibrionales,2WKA2@28221|Deltaproteobacteria	213481|Bdellovibrionales	J	Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS	proS	-	6.1.1.15	ko:K01881	ko00970,map00970	M00359,M00360	R03661	RC00055,RC00523	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	-	-	-	HGTP_anticodon,tRNA-synt_2b,tRNA_edit
DYD3_k127_1523085_8	864069.MicloDRAFT_00011440	2.093e-58	206.0	COG0590@1|root,COG0590@2|Bacteria,1RHM4@1224|Proteobacteria,2U6FN@28211|Alphaproteobacteria,1JSE2@119045|Methylobacteriaceae	28211|Alphaproteobacteria	FJ	deaminase zinc-binding	-	-	-	-	-	-	-	-	-	-	-	-	dCMP_cyt_deam_1
DYD3_k127_1523085_9	1166018.FAES_5353	1.2e-55	199.0	COG0454@1|root,COG0456@2|Bacteria,4NQSN@976|Bacteroidetes,47Q25@768503|Cytophagia	976|Bacteroidetes	K	Acetyltransferase (GNAT) domain	-	-	-	-	-	-	-	-	-	-	-	-	Acetyltransf_1,Acetyltransf_10
DYD3_k127_1523085_2	862908.BMS_3337	2.37e-143	460.0	COG0774@1|root,COG0774@2|Bacteria,1MV6T@1224|Proteobacteria,42MVM@68525|delta/epsilon subdivisions,2MSWW@213481|Bdellovibrionales,2WJ4I@28221|Deltaproteobacteria	213481|Bdellovibrionales	M	Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis	lpxC	-	3.5.1.108	ko:K02535,ko:K13599	ko00540,ko01100,ko02020,map00540,map01100,map02020	M00060,M00498	R04587	RC00166,RC00300	ko00000,ko00001,ko00002,ko01000,ko01005,ko02022	-	-	-	LpxC
DYD3_k127_1523085_4	1353529.M899_3410	6.497e-141	454.0	COG2255@1|root,COG2255@2|Bacteria,1MU38@1224|Proteobacteria,42M99@68525|delta/epsilon subdivisions,2MSQB@213481|Bdellovibrionales,2WJ2Q@28221|Deltaproteobacteria	213481|Bdellovibrionales	L	The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing	ruvB	-	3.6.4.12	ko:K03551	ko03440,map03440	-	-	-	ko00000,ko00001,ko01000,ko03400	-	-	-	RuvB_C,RuvB_N
DYD3_k127_1523085_13	862908.BMS_3340	2.055e-45	171.0	COG0632@1|root,COG0632@2|Bacteria,1MWJR@1224|Proteobacteria,42RPS@68525|delta/epsilon subdivisions,2MTEK@213481|Bdellovibrionales,2WNBH@28221|Deltaproteobacteria	213481|Bdellovibrionales	L	The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB	ruvA	-	3.6.4.12	ko:K03550	ko03440,map03440	-	-	-	ko00000,ko00001,ko01000,ko03400	-	-	-	HHH_5,RuvA_C,RuvA_N
DYD3_k127_1523085_11	1353529.M899_3412	1.258e-53	194.0	COG0817@1|root,COG0817@2|Bacteria,1MUJI@1224|Proteobacteria,42QPX@68525|delta/epsilon subdivisions,2MT8Q@213481|Bdellovibrionales,2WNF9@28221|Deltaproteobacteria	213481|Bdellovibrionales	L	Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group	ruvC	GO:0000725,GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004520,GO:0004536,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006281,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008821,GO:0009058,GO:0009059,GO:0009987,GO:0016787,GO:0016788,GO:0016889,GO:0016894,GO:0031297,GO:0032991,GO:0033554,GO:0034641,GO:0034645,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044464,GO:0045005,GO:0046483,GO:0048476,GO:0050896,GO:0051716,GO:0071704,GO:0071932,GO:0090304,GO:0090305,GO:0140097,GO:1901360,GO:1901576	3.1.22.4	ko:K01159	ko03440,map03440	-	-	-	ko00000,ko00001,ko01000,ko03400	-	-	-	RuvC
DYD3_k127_1523085_5	1353529.M899_3414	3.045e-90	305.0	COG0190@1|root,COG0190@2|Bacteria,1MWU4@1224|Proteobacteria,42MW0@68525|delta/epsilon subdivisions,2MSX8@213481|Bdellovibrionales,2WJ90@28221|Deltaproteobacteria	213481|Bdellovibrionales	F	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate	folD	GO:0003674,GO:0003824,GO:0004477,GO:0004488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006730,GO:0008150,GO:0008152,GO:0009987,GO:0016491,GO:0016645,GO:0016646,GO:0016787,GO:0016810,GO:0016814,GO:0019238,GO:0044237,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0055114	1.5.1.5,3.5.4.9	ko:K01491	ko00670,ko00720,ko01100,ko01120,ko01200,map00670,map00720,map01100,map01120,map01200	M00140,M00377	R01220,R01655	RC00202,RC00578	ko00000,ko00001,ko00002,ko01000	-	-	iAF987.Gmet_1162	THF_DHG_CYH,THF_DHG_CYH_C
DYD3_k127_1523085_3	862908.BMS_3344	1.087e-141	458.0	COG0404@1|root,COG0404@2|Bacteria,1MV96@1224|Proteobacteria,42QM6@68525|delta/epsilon subdivisions,2MSVG@213481|Bdellovibrionales,2WK2P@28221|Deltaproteobacteria	213481|Bdellovibrionales	H	The glycine cleavage system catalyzes the degradation of glycine	gcvT	-	2.1.2.10	ko:K00605	ko00260,ko00630,ko00670,ko01100,ko01110,ko01130,ko01200,map00260,map00630,map00670,map01100,map01110,map01130,map01200	M00532	R01221,R02300,R04125	RC00022,RC00069,RC00183,RC02834	ko00000,ko00001,ko00002,ko01000	-	-	-	GCV_T,GCV_T_C
DYD3_k127_1523085_12	1353529.M899_3416	5.156e-47	171.0	COG0509@1|root,COG0509@2|Bacteria,1RGV7@1224|Proteobacteria,42RS9@68525|delta/epsilon subdivisions,2MT4N@213481|Bdellovibrionales,2WP93@28221|Deltaproteobacteria	213481|Bdellovibrionales	E	The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein	gcvH	-	-	ko:K02437	ko00260,ko00630,ko01100,ko01110,ko01130,ko01200,map00260,map00630,map01100,map01110,map01130,map01200	M00532	R01221	RC00022,RC02834	ko00000,ko00001,ko00002	-	-	-	GCV_H
DYD3_k127_1523085_6	1353529.M899_3417	2.946e-61	222.0	COG0810@1|root,COG0810@2|Bacteria,1NG3C@1224|Proteobacteria,42V3M@68525|delta/epsilon subdivisions,2MT5S@213481|Bdellovibrionales,2WS05@28221|Deltaproteobacteria	213481|Bdellovibrionales	M	TonB C terminal	-	-	-	ko:K03832	-	-	-	-	ko00000,ko02000	2.C.1.1	-	-	TonB_2,TonB_C
DYD3_k127_1523085_10	1353529.M899_3419	1.766e-54	196.0	COG5009@1|root,COG5009@2|Bacteria,1MU5A@1224|Proteobacteria,42MJB@68525|delta/epsilon subdivisions,2MSQ6@213481|Bdellovibrionales,2WIXF@28221|Deltaproteobacteria	213481|Bdellovibrionales	M	Penicillin-binding protein, 1A family	mrcA	-	2.4.1.129,3.4.16.4	ko:K05366	ko00550,ko01100,ko01501,map00550,map01100,map01501	-	-	-	ko00000,ko00001,ko01000,ko01003,ko01011	-	GT51	iAF987.Gmet_0354	PCB_OB,Transgly,Transpeptidase
DYD3_k127_1579317_5	1353529.M899_1464	7.242e-119	391.0	COG0265@1|root,COG0265@2|Bacteria,1MU63@1224|Proteobacteria,42NB6@68525|delta/epsilon subdivisions,2MT16@213481|Bdellovibrionales,2WIWE@28221|Deltaproteobacteria	213481|Bdellovibrionales	M	Belongs to the peptidase S1C family	-	-	3.4.21.107	ko:K04771	ko01503,ko02020,map01503,map02020	M00728	-	-	ko00000,ko00001,ko00002,ko01000,ko01002,ko03110	-	-	-	PDZ_2,Trypsin_2
DYD3_k127_1579317_6	316274.Haur_3904	7.932e-107	358.0	COG0436@1|root,COG0436@2|Bacteria,2G5NH@200795|Chloroflexi,375A5@32061|Chloroflexia	32061|Chloroflexia	E	aminotransferase class I and II	-	-	-	-	-	-	-	-	-	-	-	-	Aminotran_1_2
DYD3_k127_1579317_4	862908.BMS_0302	1.303e-143	462.0	COG4239@1|root,COG4239@2|Bacteria,1MUM5@1224|Proteobacteria,42P23@68525|delta/epsilon subdivisions,2MSRY@213481|Bdellovibrionales,2WK75@28221|Deltaproteobacteria	213481|Bdellovibrionales	P	Binding-protein-dependent transport systems inner membrane component	-	-	-	ko:K13895	ko02010,map02010	M00349	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.5.21,3.A.1.5.24	-	-	BPD_transp_1,OppC_N
DYD3_k127_1579317_3	862908.BMS_0301	3.779e-148	476.0	COG4174@1|root,COG4174@2|Bacteria,1MVKE@1224|Proteobacteria,43BKS@68525|delta/epsilon subdivisions,2MSRF@213481|Bdellovibrionales,2X6YW@28221|Deltaproteobacteria	213481|Bdellovibrionales	P	PFAM binding-protein-dependent transport systems inner membrane component	-	-	-	ko:K13894	ko02010,map02010	M00349	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.5.21,3.A.1.5.24	-	-	BPD_transp_1
DYD3_k127_1579317_2	1201288.M900_0360	2.342e-195	622.0	COG0747@1|root,COG0747@2|Bacteria,1MUZH@1224|Proteobacteria,42MFK@68525|delta/epsilon subdivisions,2MSMZ@213481|Bdellovibrionales,2WKBU@28221|Deltaproteobacteria	213481|Bdellovibrionales	E	extracellular solute-binding protein, family 5	-	-	-	ko:K02035,ko:K13893	ko02010,ko02024,map02010,map02024	M00239,M00349	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.5,3.A.1.5.21,3.A.1.5.24	-	-	SBP_bac_5
DYD3_k127_1579317_9	1353529.M899_1479	2.604e-73	253.0	COG2227@1|root,COG2227@2|Bacteria,1RE7I@1224|Proteobacteria,42VAD@68525|delta/epsilon subdivisions,2WRMT@28221|Deltaproteobacteria	28221|Deltaproteobacteria	H	Methyltransferase domain	-	-	-	-	-	-	-	-	-	-	-	-	Methyltransf_25,TehB
DYD3_k127_1579317_16	1353529.M899_1480	5.656e-30	126.0	2AN85@1|root,2ZFP5@2|Bacteria,1P8XX@1224|Proteobacteria,432JX@68525|delta/epsilon subdivisions,2WXP3@28221|Deltaproteobacteria	28221|Deltaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_1579317_18	4155.Migut.D01911.1.p	2.199e-09	67.0	KOG1565@1|root,KOG1565@2759|Eukaryota,37MB0@33090|Viridiplantae,3GFCB@35493|Streptophyta,44EZR@71274|asterids	35493|Streptophyta	O	Belongs to the peptidase M10A family	-	-	3.4.24.34	ko:K01402	-	-	-	-	ko00000,ko01000,ko01002	-	-	-	PG_binding_1,Peptidase_M10
DYD3_k127_1579317_0	1353529.M899_1489	1.067e-273	850.0	COG0459@1|root,COG0459@2|Bacteria,1MURR@1224|Proteobacteria,42M52@68525|delta/epsilon subdivisions,2MSNR@213481|Bdellovibrionales,2WIRK@28221|Deltaproteobacteria	213481|Bdellovibrionales	O	Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions	groL	GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006457,GO:0006458,GO:0008150,GO:0009987,GO:0016465,GO:0032991,GO:0044183,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0051082,GO:0061077,GO:0101031,GO:1990220	-	ko:K04077	ko03018,ko04212,ko04940,ko05134,ko05152,map03018,map04212,map04940,map05134,map05152	-	-	-	ko00000,ko00001,ko03019,ko03029,ko03110,ko04147	-	-	-	Cpn60_TCP1
DYD3_k127_1579317_14	1353529.M899_1490	4.888e-41	154.0	COG0234@1|root,COG0234@2|Bacteria,1MZ2X@1224|Proteobacteria,42U7E@68525|delta/epsilon subdivisions,2MT7R@213481|Bdellovibrionales,2WPZP@28221|Deltaproteobacteria	213481|Bdellovibrionales	O	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter	groS	GO:0003674,GO:0005488,GO:0005515,GO:0006457,GO:0006458,GO:0006950,GO:0006986,GO:0008150,GO:0009987,GO:0010033,GO:0035966,GO:0042221,GO:0043167,GO:0043169,GO:0046872,GO:0050896,GO:0051082,GO:0051084,GO:0051085,GO:0051087,GO:0061077	-	ko:K04078	-	-	-	-	ko00000,ko03029,ko03110	-	-	-	Cpn10
DYD3_k127_1579317_19	1122613.ATUP01000002_gene2699	3.331e-08	66.0	COG0501@1|root,COG0501@2|Bacteria,1MUV4@1224|Proteobacteria,2TS3N@28211|Alphaproteobacteria,43X2J@69657|Hyphomonadaceae	28211|Alphaproteobacteria	O	Belongs to the peptidase M48B family	htpX	-	-	ko:K03799	-	M00743	-	-	ko00000,ko00002,ko01000,ko01002	-	-	-	Peptidase_M48
DYD3_k127_1579317_17	1131269.AQVV01000022_gene2240	4.09e-25	108.0	COG0607@1|root,COG0607@2|Bacteria	2|Bacteria	P	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS	-	-	-	-	-	-	-	-	-	-	-	-	Rhodanese
DYD3_k127_1579317_1	862908.BMS_0277	7.599e-266	844.0	COG0258@1|root,COG0749@1|root,COG0258@2|Bacteria,COG0749@2|Bacteria,1MU31@1224|Proteobacteria,42NAV@68525|delta/epsilon subdivisions,2MSP6@213481|Bdellovibrionales,2WJ3W@28221|Deltaproteobacteria	213481|Bdellovibrionales	L	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity	polA	-	2.7.7.7	ko:K02335	ko00230,ko00240,ko01100,ko03030,ko03410,ko03420,ko03440,map00230,map00240,map01100,map03030,map03410,map03420,map03440	-	R00375,R00376,R00377,R00378	RC02795	ko00000,ko00001,ko01000,ko03032,ko03400	-	-	-	5_3_exonuc,5_3_exonuc_N,DNA_pol_A,DNA_pol_A_exo1
DYD3_k127_1579317_12	862908.BMS_0276	4.259e-52	189.0	COG1714@1|root,COG1714@2|Bacteria,1NJXQ@1224|Proteobacteria,42XN4@68525|delta/epsilon subdivisions,2WSKW@28221|Deltaproteobacteria	28221|Deltaproteobacteria	S	RDD family	-	-	-	-	-	-	-	-	-	-	-	-	RDD
DYD3_k127_1579317_15	1353529.M899_1495	7.863e-41	153.0	COG3118@1|root,COG3118@2|Bacteria,1MZBB@1224|Proteobacteria,42TPU@68525|delta/epsilon subdivisions,2MT2V@213481|Bdellovibrionales,2WQ1M@28221|Deltaproteobacteria	213481|Bdellovibrionales	O	Belongs to the thioredoxin family	trxA	-	-	ko:K03671	ko04621,ko05418,map04621,map05418	-	-	-	ko00000,ko00001,ko03110	-	-	-	Thioredoxin
DYD3_k127_1579317_8	1353529.M899_1496	2.244e-80	271.0	COG0279@1|root,COG0279@2|Bacteria,1NVIE@1224|Proteobacteria,42QUT@68525|delta/epsilon subdivisions,2X5WE@28221|Deltaproteobacteria	28221|Deltaproteobacteria	G	Catalyzes the isomerization of sedoheptulose 7-phosphate in D-glycero-D-manno-heptose 7-phosphate	gmhA	-	5.3.1.28	ko:K03271	ko00540,ko01100,map00540,map01100	M00064	R05645,R09768,R09769	RC00434	ko00000,ko00001,ko00002,ko01000,ko01005	-	-	-	SIS_2
DYD3_k127_1579317_7	1353529.M899_1498	3.236e-89	299.0	COG0811@1|root,COG0811@2|Bacteria,1PKF8@1224|Proteobacteria,42TN7@68525|delta/epsilon subdivisions,2MU21@213481|Bdellovibrionales,2WQK7@28221|Deltaproteobacteria	213481|Bdellovibrionales	U	PFAM MotA TolQ ExbB proton channel	-	-	-	ko:K03561	-	-	-	-	ko00000,ko02000	1.A.30.2.1	-	-	MotA_ExbB
DYD3_k127_1579317_13	1353529.M899_1499	1.395e-50	185.0	COG0848@1|root,COG0848@2|Bacteria,1N8FU@1224|Proteobacteria,42WU3@68525|delta/epsilon subdivisions,2MUMF@213481|Bdellovibrionales,2WSMD@28221|Deltaproteobacteria	213481|Bdellovibrionales	U	Biopolymer transport protein	-	-	-	-	-	-	-	-	-	-	-	-	ExbD
DYD3_k127_1579317_11	1201290.M902_0275	3.23e-55	198.0	COG0848@1|root,COG0848@2|Bacteria,1NA7P@1224|Proteobacteria,42V1Q@68525|delta/epsilon subdivisions,2MTV9@213481|Bdellovibrionales,2WSGW@28221|Deltaproteobacteria	213481|Bdellovibrionales	U	Biopolymer transport protein ExbD/TolR	-	-	-	-	-	-	-	-	-	-	-	-	ExbD
DYD3_k127_1613757_2	264462.Bd1885	1.048e-11	75.0	COG3093@1|root,COG3093@2|Bacteria	2|Bacteria	K	addiction module antidote protein HigA	-	-	-	ko:K07727	-	-	-	-	ko00000,ko03000	-	-	-	DUF4423,HTH_19,HTH_26,HTH_3,TetR_C_6,TetR_N
DYD3_k127_1613757_0	264462.Bd3012	1.147e-27	122.0	COG1376@1|root,COG1376@2|Bacteria,1NGFU@1224|Proteobacteria	1224|Proteobacteria	S	L,D-transpeptidase catalytic domain	-	-	-	-	-	-	-	-	-	-	-	-	YkuD
DYD3_k127_1613757_1	1201288.M900_1537	3.789e-13	74.0	COG2027@1|root,COG2027@2|Bacteria,1NYDM@1224|Proteobacteria,430BT@68525|delta/epsilon subdivisions,2MU39@213481|Bdellovibrionales,2WW3S@28221|Deltaproteobacteria	213481|Bdellovibrionales	M	D-Ala-D-Ala carboxypeptidase 3 (S13) family	-	-	3.4.16.4	ko:K07259	ko00550,map00550	-	-	-	ko00000,ko00001,ko01000,ko01002,ko01011	-	-	-	Peptidase_S13
DYD3_k127_1630924_3	1123276.KB893249_gene459	3.023e-70	245.0	COG4117@1|root,COG4117@2|Bacteria,4NG6M@976|Bacteroidetes,47NBT@768503|Cytophagia	976|Bacteroidetes	C	Prokaryotic cytochrome b561	-	-	-	-	-	-	-	-	-	-	-	-	Ni_hydr_CYTB
DYD3_k127_1630924_5	504472.Slin_4244	4.845e-53	195.0	COG2041@1|root,COG2041@2|Bacteria,4NK0M@976|Bacteroidetes,47P5T@768503|Cytophagia	976|Bacteroidetes	S	Oxidoreductase molybdopterin binding domain	-	-	-	ko:K07147	-	-	-	-	ko00000,ko01000	-	-	-	Oxidored_molyb
DYD3_k127_1630924_4	862908.BMS_1325	3.101e-58	211.0	COG2356@1|root,COG2356@2|Bacteria	2|Bacteria	L	deoxyribonuclease I activity	bsn	-	-	-	-	-	-	-	-	-	-	-	Endonuclease_1,Flg_new
DYD3_k127_1630924_6	1392490.JHZX01000001_gene317	2.361e-52	202.0	COG2202@1|root,COG2203@1|root,COG4251@1|root,COG2202@2|Bacteria,COG2203@2|Bacteria,COG4251@2|Bacteria,4NFC3@976|Bacteroidetes,1HXUA@117743|Flavobacteriia	976|Bacteroidetes	T	Transduction Histidine Kinase	-	-	-	-	-	-	-	-	-	-	-	-	GAF_2,HATPase_c,HisKA,PAS,PAS_3,PAS_4,PAS_9
DYD3_k127_1630924_7	264462.Bd0721	1.008e-40	154.0	COG3805@1|root,COG3805@2|Bacteria,1N2DN@1224|Proteobacteria,431C0@68525|delta/epsilon subdivisions,2MU7A@213481|Bdellovibrionales,2WWKN@28221|Deltaproteobacteria	213481|Bdellovibrionales	Q	Dopa 4,5-dioxygenase family	-	-	-	ko:K10253	-	-	-	-	ko00000,ko01000	-	-	-	DOPA_dioxygen
DYD3_k127_1630924_0	264462.Bd2135	1.672e-126	415.0	COG0387@1|root,COG0387@2|Bacteria,1MWD8@1224|Proteobacteria,43B2V@68525|delta/epsilon subdivisions,2WPRS@28221|Deltaproteobacteria	28221|Deltaproteobacteria	P	Sodium/calcium exchanger protein	-	-	-	ko:K07300	-	-	-	-	ko00000,ko02000	2.A.19	-	-	Na_Ca_ex
DYD3_k127_1630924_2	862908.BMS_0481	2.933e-90	303.0	COG0451@1|root,COG0451@2|Bacteria,1N8PG@1224|Proteobacteria,42TCH@68525|delta/epsilon subdivisions,2WPEI@28221|Deltaproteobacteria	28221|Deltaproteobacteria	GM	NAD dependent epimerase/dehydratase family	-	-	5.1.3.2	ko:K01784	ko00052,ko00520,ko01100,map00052,map00520,map01100	M00361,M00362,M00632	R00291,R02984	RC00289	ko00000,ko00001,ko00002,ko01000	-	-	-	Epimerase
DYD3_k127_1631061_5	765869.BDW_01235	9.907e-58	208.0	COG0009@1|root,COG0009@2|Bacteria,1MVPM@1224|Proteobacteria,42T6S@68525|delta/epsilon subdivisions,2MTS9@213481|Bdellovibrionales,2WP34@28221|Deltaproteobacteria	213481|Bdellovibrionales	J	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine	yrdC1	-	2.7.7.87	ko:K07566	-	-	R10463	RC00745	ko00000,ko01000,ko03009,ko03016	-	-	-	SUA5,Sua5_yciO_yrdC
DYD3_k127_1631061_7	862908.BMS_2529	3.344e-13	72.0	COG2921@1|root,COG2921@2|Bacteria,1P6YR@1224|Proteobacteria,4329X@68525|delta/epsilon subdivisions,2WX7Q@28221|Deltaproteobacteria	28221|Deltaproteobacteria	S	Belongs to the UPF0250 family	-	-	-	ko:K09158	-	-	-	-	ko00000	-	-	-	DUF493
DYD3_k127_1631061_1	1353529.M899_2509	1.199e-131	428.0	COG0240@1|root,COG0240@2|Bacteria,1MUU3@1224|Proteobacteria,42NQB@68525|delta/epsilon subdivisions,2WIWW@28221|Deltaproteobacteria	28221|Deltaproteobacteria	I	Glycerol-3-phosphate dehydrogenase	gpsA	-	1.1.1.94	ko:K00057	ko00564,ko01110,map00564,map01110	-	R00842,R00844	RC00029	ko00000,ko00001,ko01000	-	-	-	NAD_Gly3P_dh_C,NAD_Gly3P_dh_N
DYD3_k127_1631061_0	862908.BMS_2527	3.834e-184	598.0	COG4232@1|root,COG4233@1|root,COG4232@2|Bacteria,COG4233@2|Bacteria,1MU8W@1224|Proteobacteria,42MVQ@68525|delta/epsilon subdivisions,2MT59@213481|Bdellovibrionales,2WKBG@28221|Deltaproteobacteria	213481|Bdellovibrionales	CO	PFAM cytochrome c biogenesis protein, transmembrane region	dsbD	-	1.8.1.8	ko:K04084	-	-	-	-	ko00000,ko01000,ko03110	5.A.1.1	-	-	DsbC,DsbD,Thioredoxin,Thioredoxin_7
DYD3_k127_1631061_3	862908.BMS_2526	5.716e-81	277.0	COG0614@1|root,COG0614@2|Bacteria,1MWVF@1224|Proteobacteria,42PQA@68525|delta/epsilon subdivisions,2WKNZ@28221|Deltaproteobacteria	28221|Deltaproteobacteria	P	PFAM periplasmic binding protein	-	-	-	ko:K02016	ko02010,map02010	M00240	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.14	-	-	Peripla_BP_2
DYD3_k127_1631061_2	862908.BMS_0652	8.717e-92	311.0	COG1162@1|root,COG1162@2|Bacteria,1MUEF@1224|Proteobacteria,42MQV@68525|delta/epsilon subdivisions,2WIZC@28221|Deltaproteobacteria	28221|Deltaproteobacteria	S	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit	rsgA	-	3.1.3.100	ko:K06949	ko00730,ko01100,map00730,map01100	-	R00615,R02135	RC00002,RC00017	ko00000,ko00001,ko01000,ko03009	-	-	-	RsgA_GTPase
DYD3_k127_1631061_9	487316.BBNM01000005_gene125	0.0005298	45.0	2A2R8@1|root,30R45@2|Bacteria,1QBY9@1224|Proteobacteria,1T7JH@1236|Gammaproteobacteria,3NSE4@468|Moraxellaceae	1236|Gammaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_1631061_4	264462.Bd1451	7.615e-65	225.0	COG0454@1|root,COG1846@1|root,COG0456@2|Bacteria,COG1846@2|Bacteria,1Q5AK@1224|Proteobacteria,43AJW@68525|delta/epsilon subdivisions	1224|Proteobacteria	K	Acetyltransferase (GNAT) domain	-	-	-	-	-	-	-	-	-	-	-	-	Acetyltransf_1,Acetyltransf_7,MarR,MarR_2
DYD3_k127_165528_4	264462.Bd3758	1.776e-48	181.0	COG3093@1|root,COG3093@2|Bacteria,1Q234@1224|Proteobacteria,437QF@68525|delta/epsilon subdivisions,2MUDN@213481|Bdellovibrionales,2X2YY@28221|Deltaproteobacteria	213481|Bdellovibrionales	K	Domain of unknown function (DUF4423)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4423
DYD3_k127_165528_2	1353529.M899_2309	2.437e-65	257.0	COG2911@1|root,COG3209@1|root,COG2911@2|Bacteria,COG3209@2|Bacteria,1QY1R@1224|Proteobacteria,43C93@68525|delta/epsilon subdivisions,2MUT2@213481|Bdellovibrionales,2X7JI@28221|Deltaproteobacteria	213481|Bdellovibrionales	M	cell wall surface anchor family protein	-	-	-	-	-	-	-	-	-	-	-	-	Peptidase_S74
DYD3_k127_165528_6	264462.Bd3246	1.209e-45	177.0	COG0597@1|root,COG0597@2|Bacteria,1Q97V@1224|Proteobacteria,437IK@68525|delta/epsilon subdivisions,2MTPV@213481|Bdellovibrionales,2X2S5@28221|Deltaproteobacteria	213481|Bdellovibrionales	MU	This protein specifically catalyzes the removal of signal peptides from prolipoproteins	-	-	3.4.23.36	ko:K03101	ko03060,map03060	-	-	-	ko00000,ko00001,ko01000,ko01002	-	-	-	Peptidase_A8
DYD3_k127_165528_8	862908.BMS_1653	2.55e-29	128.0	2FIK9@1|root,34ACA@2|Bacteria,1P27B@1224|Proteobacteria,4314P@68525|delta/epsilon subdivisions,2MT83@213481|Bdellovibrionales,2WX2C@28221|Deltaproteobacteria	213481|Bdellovibrionales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_165528_7	862908.BMS_1876	1.983e-35	146.0	2A8H6@1|root,30XJ8@2|Bacteria,1P5C2@1224|Proteobacteria,4333S@68525|delta/epsilon subdivisions,2WY41@28221|Deltaproteobacteria	28221|Deltaproteobacteria	S	Endonuclease/Exonuclease/phosphatase family	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_165528_1	1353529.M899_1560	1.204e-72	251.0	COG0847@1|root,COG0847@2|Bacteria	2|Bacteria	L	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease	polC	-	2.7.7.7	ko:K02342	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	M00260	R00375,R00376,R00377,R00378	RC02795	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	-	-	-	BRCT,RNase_T
DYD3_k127_165528_3	862908.BMS_1878	2.619e-53	194.0	COG0739@1|root,COG0739@2|Bacteria,1QVU7@1224|Proteobacteria,43C9J@68525|delta/epsilon subdivisions,2MT9Q@213481|Bdellovibrionales,2X7JZ@28221|Deltaproteobacteria	213481|Bdellovibrionales	M	Peptidase family M23	-	-	-	-	-	-	-	-	-	-	-	-	Peptidase_M23
DYD3_k127_165528_0	862908.BMS_1879	1.463e-80	275.0	COG0496@1|root,COG0496@2|Bacteria,1MVHE@1224|Proteobacteria,42N0I@68525|delta/epsilon subdivisions,2WMUX@28221|Deltaproteobacteria	28221|Deltaproteobacteria	S	Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates	surE	-	3.1.3.5	ko:K03787	ko00230,ko00240,ko00760,ko01100,ko01110,map00230,map00240,map00760,map01100,map01110	-	R00183,R00511,R00963,R01126,R01227,R01569,R01664,R01968,R02088,R02102,R02323,R02719,R03346	RC00017	ko00000,ko00001,ko01000	-	-	-	SurE
DYD3_k127_1679789_0	862908.BMS_2701	2.736e-25	122.0	COG0823@1|root,COG0823@2|Bacteria	2|Bacteria	U	Involved in the tonB-independent uptake of proteins	ydjN	-	-	-	-	-	-	-	-	-	-	-	Cu_amine_oxidN1,DUF5050,LRR_4,PD40,Transglut_core
DYD3_k127_1679789_2	765869.BDW_05500	3.769e-06	57.0	2DCRB@1|root,2ZF2A@2|Bacteria,1PAX0@1224|Proteobacteria	1224|Proteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_1679789_1	1353529.M899_1445	1.668e-22	106.0	COG2304@1|root,COG5184@1|root,COG2304@2|Bacteria,COG5184@2|Bacteria,1PDQV@1224|Proteobacteria,43CYI@68525|delta/epsilon subdivisions,2X86P@28221|Deltaproteobacteria	28221|Deltaproteobacteria	M	SMART Integrin alpha beta-propellor repeat protein	-	-	-	-	-	-	-	-	-	-	-	-	FG-GAP_2
DYD3_k127_1682962_1	1469607.KK073769_gene5191	1.852e-63	229.0	COG0753@1|root,COG0753@2|Bacteria,1G4T1@1117|Cyanobacteria,1HNDV@1161|Nostocales	1117|Cyanobacteria	P	Catalase	-	-	-	-	-	-	-	-	-	-	-	-	Catalase
DYD3_k127_1682962_0	1201288.M900_A0133	3.765e-139	463.0	COG2303@1|root,COG2303@2|Bacteria,1QQ8F@1224|Proteobacteria,42PWF@68525|delta/epsilon subdivisions,2MTM7@213481|Bdellovibrionales,2WKVA@28221|Deltaproteobacteria	213481|Bdellovibrionales	E	GMC oxidoreductase	choD	-	1.1.3.6	ko:K03333	ko00984,ko01120,map00984,map01120	-	R01459	RC00146	ko00000,ko00001,ko01000	-	-	-	GMC_oxred_C,GMC_oxred_N
DYD3_k127_1682962_6	290397.Adeh_3956	8.39e-20	98.0	2A9VF@1|root,30Z3B@2|Bacteria,1PKZS@1224|Proteobacteria,435JG@68525|delta/epsilon subdivisions,2WZXJ@28221|Deltaproteobacteria,2Z0YG@29|Myxococcales	28221|Deltaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_1682962_8	8081.XP_008408933.1	1.016e-08	66.0	KOG3648@1|root,KOG3648@2759|Eukaryota,38DNM@33154|Opisthokonta,3BAF2@33208|Metazoa,3CRII@33213|Bilateria,487ZY@7711|Chordata,48UWD@7742|Vertebrata,49XD6@7898|Actinopterygii	33208|Metazoa	U	Golgi glycoprotein	GLG1	GO:0000137,GO:0000138,GO:0000139,GO:0001501,GO:0002376,GO:0003674,GO:0005102,GO:0005488,GO:0005515,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005737,GO:0005794,GO:0005795,GO:0005797,GO:0005886,GO:0006810,GO:0006886,GO:0006928,GO:0007275,GO:0008104,GO:0008150,GO:0009653,GO:0009887,GO:0009892,GO:0009966,GO:0009968,GO:0009987,GO:0010468,GO:0010605,GO:0010629,GO:0010646,GO:0010648,GO:0010955,GO:0012505,GO:0015031,GO:0015833,GO:0016020,GO:0016021,GO:0016477,GO:0017015,GO:0017134,GO:0019222,GO:0019838,GO:0023051,GO:0023057,GO:0030162,GO:0030512,GO:0031012,GO:0031090,GO:0031224,GO:0031323,GO:0031324,GO:0031984,GO:0031985,GO:0032268,GO:0032269,GO:0032330,GO:0032501,GO:0032502,GO:0033036,GO:0034613,GO:0040011,GO:0042886,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044421,GO:0044422,GO:0044424,GO:0044425,GO:0044431,GO:0044444,GO:0044446,GO:0044464,GO:0045184,GO:0045595,GO:0045861,GO:0046907,GO:0048513,GO:0048519,GO:0048523,GO:0048583,GO:0048585,GO:0048705,GO:0048731,GO:0048856,GO:0048870,GO:0050789,GO:0050793,GO:0050794,GO:0050900,GO:0051171,GO:0051172,GO:0051179,GO:0051234,GO:0051239,GO:0051246,GO:0051248,GO:0051641,GO:0051649,GO:0051674,GO:0060255,GO:0060348,GO:0060349,GO:0061035,GO:0065007,GO:0070613,GO:0070727,GO:0071702,GO:0071705,GO:0071944,GO:0080090,GO:0090092,GO:0090101,GO:0090287,GO:0090288,GO:0098588,GO:0098791,GO:1903317,GO:1903318,GO:1903844,GO:1903845,GO:2000026	-	ko:K06816	ko04514,map04514	-	-	-	ko00000,ko00001,ko04516	-	-	-	Cys_rich_FGFR
DYD3_k127_1682962_3	1201290.M902_2590	3.362e-35	138.0	COG2346@1|root,COG2346@2|Bacteria,1RH21@1224|Proteobacteria,42WN5@68525|delta/epsilon subdivisions,2MU6B@213481|Bdellovibrionales,2WS3V@28221|Deltaproteobacteria	213481|Bdellovibrionales	S	Bacterial-like globin	-	-	-	ko:K06886	-	-	-	-	ko00000	-	-	-	Bac_globin
DYD3_k127_1682962_2	1168065.DOK_02973	1.937e-36	153.0	COG3930@1|root,COG3930@2|Bacteria,1PYFH@1224|Proteobacteria,1RP1J@1236|Gammaproteobacteria,1J7I5@118884|unclassified Gammaproteobacteria	1236|Gammaproteobacteria	S	DUF1704	IV02_27630	-	-	-	-	-	-	-	-	-	-	-	DUF1704
DYD3_k127_1682962_5	862908.BMS_2494	1.913e-22	110.0	2DWD5@1|root,33ZQZ@2|Bacteria,1NDIS@1224|Proteobacteria,42WHX@68525|delta/epsilon subdivisions,2MTG8@213481|Bdellovibrionales,2WSGI@28221|Deltaproteobacteria	213481|Bdellovibrionales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_1682962_7	375286.mma_3428	2.056e-15	86.0	COG2071@1|root,COG2071@2|Bacteria,1MV8E@1224|Proteobacteria,2VMMI@28216|Betaproteobacteria,47324@75682|Oxalobacteraceae	28216|Betaproteobacteria	S	Peptidase C26	-	-	4.1.3.27	ko:K01658,ko:K07010	ko00400,ko00405,ko01100,ko01110,ko01130,ko01230,ko02024,ko02025,map00400,map00405,map01100,map01110,map01130,map01230,map02024,map02025	M00023	R00985,R00986	RC00010,RC02148,RC02414	ko00000,ko00001,ko00002,ko01000,ko01002	-	-	-	Peptidase_C26
DYD3_k127_1682962_4	1133849.O3I_021710	2.489e-24	117.0	COG0308@1|root,COG0308@2|Bacteria,2HJ8E@201174|Actinobacteria,4G5T5@85025|Nocardiaceae	201174|Actinobacteria	E	aminopeptidase N	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_1692707_3	1231057.AMGD01000001_gene2417	9.489e-77	265.0	COG0702@1|root,COG0702@2|Bacteria,1TT3N@1239|Firmicutes,4HB09@91061|Bacilli	91061|Bacilli	GM	NAD(P)H-binding	-	-	1.6.5.3,1.6.99.3	ko:K00329,ko:K00356	ko00190,map00190	-	R11945	RC00061	ko00000,ko00001,ko01000	-	-	-	NAD_binding_10
DYD3_k127_1692707_7	1265313.HRUBRA_02380	2.73e-27	121.0	2C9MV@1|root,34BZA@2|Bacteria	2|Bacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_1692707_5	1185876.BN8_01394	3.078e-55	200.0	COG0637@1|root,COG0637@2|Bacteria,4NHHK@976|Bacteroidetes,47P9C@768503|Cytophagia	976|Bacteroidetes	S	Haloacid dehalogenase-like hydrolase	-	-	-	-	-	-	-	-	-	-	-	-	HAD_2
DYD3_k127_1692707_4	215803.DB30_7307	2.598e-71	265.0	COG0642@1|root,COG2205@2|Bacteria,1NRP8@1224|Proteobacteria,42RWK@68525|delta/epsilon subdivisions,2X4H3@28221|Deltaproteobacteria,2YZ04@29|Myxococcales	28221|Deltaproteobacteria	T	GAF domain	-	-	-	-	-	-	-	-	-	-	-	-	GAF_2,HATPase_c,HisKA,PAS_4
DYD3_k127_1692707_8	1173021.ALWA01000035_gene3902	3.376e-26	125.0	COG2202@1|root,COG2202@2|Bacteria	2|Bacteria	T	Pas domain	-	-	-	-	-	-	-	-	-	-	-	-	GAF_2,GGDEF,GerE,HATPase_c,HisKA,HisKA_2,PAS,PAS_3,PAS_4,PAS_8,PAS_9,Response_reg
DYD3_k127_1692707_9	1128421.JAGA01000003_gene3728	6.462e-22	99.0	COG0745@1|root,COG0745@2|Bacteria	1128421.JAGA01000003_gene3728|-	T	phosphorelay signal transduction system	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_1692707_2	468059.AUHA01000004_gene2372	6.769e-79	286.0	COG0642@1|root,COG3614@1|root,COG2205@2|Bacteria,COG3614@2|Bacteria	2|Bacteria	T	CHASE	-	-	-	-	-	-	-	-	-	-	-	-	CHASE,EAL,GAF_2,GGDEF,MASE1,PAS_3,PAS_4,PAS_9
DYD3_k127_1692707_1	1123234.AUKI01000021_gene933	1.055e-125	419.0	COG0665@1|root,COG0723@1|root,COG0665@2|Bacteria,COG0723@2|Bacteria,4NFT6@976|Bacteroidetes,1I14A@117743|Flavobacteriia	976|Bacteroidetes	CE	fad dependent oxidoreductase	-	-	-	-	-	-	-	-	-	-	-	-	DAO,Rieske
DYD3_k127_1692707_10	1169143.KB911034_gene992	0.0008554	47.0	COG2823@1|root,COG2823@2|Bacteria,1PXMK@1224|Proteobacteria,2WD0W@28216|Betaproteobacteria,1K8YY@119060|Burkholderiaceae	28216|Betaproteobacteria	S	PFAM transport-associated	-	-	-	-	-	-	-	-	-	-	-	-	BON
DYD3_k127_1692707_6	314265.R2601_19999	1.726e-44	174.0	COG4313@1|root,COG4313@2|Bacteria,1PC95@1224|Proteobacteria,2U0FJ@28211|Alphaproteobacteria	28211|Alphaproteobacteria	C	Putative MetA-pathway of phenol degradation	-	-	-	-	-	-	-	-	-	-	-	-	Phenol_MetA_deg
DYD3_k127_1692707_0	264462.Bd3608	2.438e-126	414.0	COG5361@1|root,COG5361@2|Bacteria,1PB8E@1224|Proteobacteria	1224|Proteobacteria	S	Protein of unknown function (DUF1214)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1214,DUF1254
DYD3_k127_1705118_7	1121887.AUDK01000002_gene2229	0.0003157	46.0	COG4775@1|root,COG4775@2|Bacteria,4NE80@976|Bacteroidetes,1HXIH@117743|Flavobacteriia,2NSB1@237|Flavobacterium	976|Bacteroidetes	M	membrane	-	-	-	-	-	-	-	-	-	-	-	-	Bac_surface_Ag,POTRA
DYD3_k127_1705118_4	1353529.M899_2009	2.442e-62	218.0	COG0330@1|root,COG0330@2|Bacteria,1MUM8@1224|Proteobacteria,42NX0@68525|delta/epsilon subdivisions,2MTG6@213481|Bdellovibrionales,2WISZ@28221|Deltaproteobacteria	213481|Bdellovibrionales	O	PFAM Band 7 protein	-	-	-	-	-	-	-	-	-	-	-	-	Band_7
DYD3_k127_1705118_6	536233.CLO_3339	9.151e-13	80.0	COG0726@1|root,COG0726@2|Bacteria,1TYRH@1239|Firmicutes,24GVR@186801|Clostridia,36I2Q@31979|Clostridiaceae	186801|Clostridia	G	deacetylase	-	-	-	-	-	-	-	-	-	-	-	-	Polysacc_deac_1
DYD3_k127_1705118_0	1353529.M899_3086	3.724e-268	837.0	COG1217@1|root,COG1217@2|Bacteria,1MV5Q@1224|Proteobacteria,42M3S@68525|delta/epsilon subdivisions,2MSRP@213481|Bdellovibrionales,2WJVZ@28221|Deltaproteobacteria	213481|Bdellovibrionales	T	elongation factor Tu domain 2 protein	typA	-	-	ko:K06207	-	-	-	-	ko00000	-	-	-	EFG_C,GTP_EFTU,GTP_EFTU_D2
DYD3_k127_1705118_3	589873.EP13_10660	1.251e-82	281.0	COG2220@1|root,COG2220@2|Bacteria,1MVP2@1224|Proteobacteria,1RRSZ@1236|Gammaproteobacteria,46APP@72275|Alteromonadaceae	1236|Gammaproteobacteria	S	Beta-lactamase superfamily domain	-	-	-	-	-	-	-	-	-	-	-	-	Lactamase_B_2,Lactamase_B_3
DYD3_k127_1705118_5	1280952.HJA_03426	8.188e-15	78.0	COG0789@1|root,COG0789@2|Bacteria,1MZ3P@1224|Proteobacteria,2UC95@28211|Alphaproteobacteria,43ZX9@69657|Hyphomonadaceae	28211|Alphaproteobacteria	K	helix_turn_helix, mercury resistance	-	-	-	ko:K08365	-	-	-	-	ko00000,ko03000	-	-	-	MerR,MerR-DNA-bind,MerR_1
DYD3_k127_1705118_1	862908.BMS_1965	3.408e-207	656.0	COG2509@1|root,COG2509@2|Bacteria,1MV6P@1224|Proteobacteria,42MT3@68525|delta/epsilon subdivisions,2MSPG@213481|Bdellovibrionales,2WIK5@28221|Deltaproteobacteria	213481|Bdellovibrionales	S	FAD dependent oxidoreductase	-	-	-	ko:K07137	-	-	-	-	ko00000	-	-	-	FAD_binding_2,FAD_binding_3,HI0933_like,Pyr_redox_2
DYD3_k127_1705118_2	1353529.M899_0298	2.244e-99	338.0	COG1058@1|root,COG1546@1|root,COG1058@2|Bacteria,COG1546@2|Bacteria,1RH2Y@1224|Proteobacteria,42MQ4@68525|delta/epsilon subdivisions,2MT47@213481|Bdellovibrionales,2WMDT@28221|Deltaproteobacteria	213481|Bdellovibrionales	S	Belongs to the CinA family	cinA	GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0006139,GO:0006259,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363	3.5.1.42	ko:K03742,ko:K03743	ko00760,map00760	-	R02322	RC00100	ko00000,ko00001,ko01000	-	-	-	CinA,MoCF_biosynth
DYD3_k127_178550_1	1201288.M900_0535	1.87e-211	671.0	COG1960@1|root,COG1960@2|Bacteria,1MU20@1224|Proteobacteria,42MUH@68525|delta/epsilon subdivisions,2MTRV@213481|Bdellovibrionales,2WJ16@28221|Deltaproteobacteria	213481|Bdellovibrionales	C	acyl-coa dehydrogenase	-	-	-	ko:K09456,ko:K20035	ko00920,map00920	-	R11130	RC03363	ko00000,ko00001,ko01000	-	-	-	Acyl-CoA_dh_1,Acyl-CoA_dh_C,Acyl-CoA_dh_M,Acyl-CoA_dh_N,AcylCoA_DH_N
DYD3_k127_178550_6	1353529.M899_1452	9.17e-36	144.0	COG0745@1|root,COG0745@2|Bacteria,1MVCB@1224|Proteobacteria,4314Y@68525|delta/epsilon subdivisions,2MUDX@213481|Bdellovibrionales,2WWYE@28221|Deltaproteobacteria	1224|Proteobacteria	K	Transcriptional regulatory protein, C terminal	-	-	-	ko:K07657	ko02020,map02020	M00434	-	-	ko00000,ko00001,ko00002,ko02022	-	-	-	Response_reg,Trans_reg_C
DYD3_k127_178550_7	1353529.M899_1452	2.098e-31	132.0	COG0745@1|root,COG0745@2|Bacteria,1MVCB@1224|Proteobacteria,4314Y@68525|delta/epsilon subdivisions,2MUDX@213481|Bdellovibrionales,2WWYE@28221|Deltaproteobacteria	1224|Proteobacteria	K	Transcriptional regulatory protein, C terminal	-	-	-	ko:K07657	ko02020,map02020	M00434	-	-	ko00000,ko00001,ko00002,ko02022	-	-	-	Response_reg,Trans_reg_C
DYD3_k127_178550_3	1353529.M899_3147	2.648e-84	294.0	COG0116@1|root,COG0116@2|Bacteria,1MUQM@1224|Proteobacteria,42NJ1@68525|delta/epsilon subdivisions,2MSZF@213481|Bdellovibrionales,2WJ5S@28221|Deltaproteobacteria	213481|Bdellovibrionales	L	Belongs to the methyltransferase superfamily	rlmL	-	2.1.1.173,2.1.1.264	ko:K07444,ko:K12297	-	-	R07234	RC00003	ko00000,ko01000,ko03009	-	-	-	Methyltrans_SAM,THUMP,UPF0020
DYD3_k127_178550_0	485918.Cpin_2039	4.691e-240	747.0	COG0499@1|root,COG0499@2|Bacteria,4NEKE@976|Bacteroidetes,1IQTE@117747|Sphingobacteriia	976|Bacteroidetes	H	May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine	ahcY	GO:0000096,GO:0003674,GO:0003824,GO:0004013,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006520,GO:0006534,GO:0006555,GO:0006575,GO:0006725,GO:0006732,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009066,GO:0009069,GO:0009116,GO:0009119,GO:0009987,GO:0016787,GO:0016801,GO:0016802,GO:0017144,GO:0019752,GO:0033353,GO:0034641,GO:0042278,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046128,GO:0046439,GO:0046483,GO:0046498,GO:0046500,GO:0051186,GO:0055086,GO:0071704,GO:0072521,GO:1901135,GO:1901360,GO:1901564,GO:1901605,GO:1901657	3.3.1.1	ko:K01251	ko00270,ko01100,map00270,map01100	M00035	R00192,R04936	RC00056,RC00069,RC01161,RC01243	ko00000,ko00001,ko00002,ko01000,ko01009,ko04147	-	-	-	AdoHcyase,AdoHcyase_NAD
DYD3_k127_178550_5	1184267.A11Q_945	1.554e-38	157.0	COG2885@1|root,COG2885@2|Bacteria,1R8DG@1224|Proteobacteria,42NGC@68525|delta/epsilon subdivisions,2WMAP@28221|Deltaproteobacteria	28221|Deltaproteobacteria	M	Belongs to the ompA family	-	-	-	ko:K03286	-	-	-	-	ko00000,ko02000	1.B.6	-	-	OmpA,Phenol_MetA_deg,TSP_3,VWA
DYD3_k127_178550_4	1201288.M900_0540	4.428e-44	165.0	COG0698@1|root,COG0698@2|Bacteria,1RHBF@1224|Proteobacteria,42SAN@68525|delta/epsilon subdivisions,2MT4D@213481|Bdellovibrionales,2WP1V@28221|Deltaproteobacteria	213481|Bdellovibrionales	G	ribose 5-phosphate isomerase B	rpiB	-	5.3.1.6	ko:K01808	ko00030,ko00051,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00051,map00710,map01100,map01110,map01120,map01130,map01200,map01230	M00004,M00007,M00165,M00167	R01056,R09030	RC00376,RC00434	ko00000,ko00001,ko00002,ko01000	-	-	iAF987.Gmet_1604	LacAB_rpiB
DYD3_k127_1800477_13	1353529.M899_3284	2.017e-20	96.0	COG1051@1|root,COG1051@2|Bacteria	2|Bacteria	F	GDP-mannose mannosyl hydrolase activity	-	-	3.6.1.55	ko:K03574	-	-	-	-	ko00000,ko01000,ko03400	-	-	-	NIPSNAP,NUDIX
DYD3_k127_1800477_11	1353529.M899_3283	6.035e-43	168.0	2EEQZ@1|root,338IP@2|Bacteria	2|Bacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_1800477_10	862908.BMS_3186	2.964e-58	207.0	2EC0X@1|root,33605@2|Bacteria	2|Bacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_1800477_4	1201288.M900_2595	9.761e-148	479.0	COG1253@1|root,COG1253@2|Bacteria,1MV3P@1224|Proteobacteria,42N97@68525|delta/epsilon subdivisions,2WJV1@28221|Deltaproteobacteria	28221|Deltaproteobacteria	S	PFAM CBS domain	-	-	-	ko:K03699	-	-	-	-	ko00000,ko02042	-	-	-	CBS,CorC_HlyC,DUF21
DYD3_k127_1800477_7	862908.BMS_3184	1.197e-120	395.0	COG0492@1|root,COG0492@2|Bacteria,1MVWS@1224|Proteobacteria,42YY5@68525|delta/epsilon subdivisions,2WPYC@28221|Deltaproteobacteria	28221|Deltaproteobacteria	C	Pyridine nucleotide-disulphide oxidoreductase	-	-	1.8.1.9	ko:K00384	ko00450,map00450	-	R02016,R03596,R09372	RC00013,RC02518,RC02873	ko00000,ko00001,ko01000	-	-	-	Pyr_redox_2
DYD3_k127_1800477_12	1353529.M899_3274	4.26e-28	116.0	COG0633@1|root,COG0633@2|Bacteria	2|Bacteria	C	Ferredoxin	-	-	-	ko:K04755	-	-	-	-	ko00000	-	-	-	Fer2
DYD3_k127_1800477_3	862908.BMS_3181	3.5e-169	538.0	COG0334@1|root,COG0334@2|Bacteria,1MUXS@1224|Proteobacteria,42PYC@68525|delta/epsilon subdivisions,2MSRK@213481|Bdellovibrionales,2WMC4@28221|Deltaproteobacteria	213481|Bdellovibrionales	C	Belongs to the Glu Leu Phe Val dehydrogenases family	ldh	-	1.4.1.9	ko:K00263	ko00280,ko00290,ko01100,ko01110,ko01130,map00280,map00290,map01100,map01110,map01130	-	R01088,R01434,R02196	RC00006,RC00036	ko00000,ko00001,ko01000	-	-	-	ELFV_dehydrog,ELFV_dehydrog_N
DYD3_k127_1800477_6	1121007.AUML01000004_gene2366	1.409e-133	464.0	COG0747@1|root,COG1361@1|root,COG2931@1|root,COG3210@1|root,COG4932@1|root,COG5184@1|root,COG0747@2|Bacteria,COG1361@2|Bacteria,COG2931@2|Bacteria,COG3210@2|Bacteria,COG4932@2|Bacteria,COG5184@2|Bacteria,4PI2M@976|Bacteroidetes,1ICIX@117743|Flavobacteriia,2YGUY@290174|Aquimarina	976|Bacteroidetes	M	C-terminal domain of CHU protein family	-	-	-	-	-	-	-	-	-	-	-	-	CHU_C
DYD3_k127_1800477_8	1353529.M899_3272	1.277e-108	362.0	28QK0@1|root,2ZD1U@2|Bacteria,1NFK4@1224|Proteobacteria,42VSJ@68525|delta/epsilon subdivisions,2MT9N@213481|Bdellovibrionales,2WRIZ@28221|Deltaproteobacteria	213481|Bdellovibrionales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_1800477_1	1254432.SCE1572_38620	3.017e-236	760.0	COG1032@1|root,COG5011@1|root,COG1032@2|Bacteria,COG5011@2|Bacteria,1MV5G@1224|Proteobacteria,42MPT@68525|delta/epsilon subdivisions,2WJG9@28221|Deltaproteobacteria,2YUJ4@29|Myxococcales	28221|Deltaproteobacteria	C	SMART Elongator protein 3 MiaB NifB	-	-	-	-	-	-	-	-	-	-	-	-	DUF2344,Radical_SAM
DYD3_k127_1800477_2	517418.Ctha_0693	2.571e-180	574.0	COG0004@1|root,COG0004@2|Bacteria,1FDG1@1090|Chlorobi	1090|Chlorobi	P	PFAM Rh family protein ammonium transporter	-	-	-	ko:K03320	-	-	-	-	ko00000,ko02000	1.A.11	-	-	Ammonium_transp
DYD3_k127_1800477_5	1121904.ARBP01000080_gene6042	6.014e-144	476.0	COG1404@1|root,COG1404@2|Bacteria,4NF1M@976|Bacteroidetes,47MAI@768503|Cytophagia	976|Bacteroidetes	O	Peptidase S8 and S53 subtilisin kexin sedolisin	wprA	-	-	-	-	-	-	-	-	-	-	-	Peptidase_S8
DYD3_k127_1800477_0	1353529.M899_3271	0.0	1103.0	COG0022@1|root,COG1071@1|root,COG0022@2|Bacteria,COG1071@2|Bacteria,1MU5R@1224|Proteobacteria,43DBH@68525|delta/epsilon subdivisions,2MT27@213481|Bdellovibrionales,2X8HI@28221|Deltaproteobacteria	213481|Bdellovibrionales	C	Transketolase, pyrimidine binding domain	-	-	1.2.4.4	ko:K11381	ko00280,ko00640,ko01100,ko01110,ko01130,map00280,map00640,map01100,map01110,map01130	M00036	R07599,R07600,R07601,R07602,R07603,R07604,R10996,R10997	RC00027,RC00627,RC02743,RC02883,RC02949,RC02953	br01601,ko00000,ko00001,ko00002,ko01000	-	-	-	E1_dh,Transket_pyr,Transketolase_C
DYD3_k127_1800477_9	1550091.JROE01000002_gene1151	4.136e-71	263.0	COG0574@1|root,COG3848@1|root,COG0574@2|Bacteria,COG3848@2|Bacteria,4NH4R@976|Bacteroidetes,1ISB2@117747|Sphingobacteriia	976|Bacteroidetes	GT	Pyruvate phosphate dikinase, PEP pyruvate binding	-	-	2.7.9.2	ko:K01007	ko00620,ko00680,ko00720,ko01100,ko01120,ko01200,map00620,map00680,map00720,map01100,map01120,map01200	M00173,M00374	R00199	RC00002,RC00015	ko00000,ko00001,ko00002,ko01000	-	-	-	PEP-utilizers,PPDK_N
DYD3_k127_1802371_4	1353529.M899_2397	5.119e-77	263.0	COG0522@1|root,COG0522@2|Bacteria,1MW0U@1224|Proteobacteria,42M5X@68525|delta/epsilon subdivisions,2MT28@213481|Bdellovibrionales,2WJGN@28221|Deltaproteobacteria	213481|Bdellovibrionales	J	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit	rpsD	-	-	ko:K02986	ko03010,map03010	M00178,M00179	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_S4,S4
DYD3_k127_1802371_5	679201.HMPREF9334_01434	4.429e-64	223.0	COG0054@1|root,COG0054@2|Bacteria,1V1DA@1239|Firmicutes,4H3ZR@909932|Negativicutes	909932|Negativicutes	H	Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin	ribH	-	2.5.1.78	ko:K00794	ko00740,ko01100,ko01110,map00740,map01100,map01110	M00125	R04457	RC00960	ko00000,ko00001,ko00002,ko01000	-	-	-	DMRL_synthase
DYD3_k127_1802371_1	1120973.AQXL01000121_gene83	7.929e-143	464.0	COG0108@1|root,COG0807@1|root,COG0108@2|Bacteria,COG0807@2|Bacteria,1TPH9@1239|Firmicutes,4H9PW@91061|Bacilli,2784U@186823|Alicyclobacillaceae	91061|Bacilli	H	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate	ribBA	GO:0003674,GO:0003824,GO:0003933,GO:0003935,GO:0006766,GO:0006767,GO:0006771,GO:0006807,GO:0008150,GO:0008152,GO:0008686,GO:0009058,GO:0009110,GO:0009231,GO:0009987,GO:0016787,GO:0016810,GO:0016814,GO:0016829,GO:0016830,GO:0017144,GO:0018130,GO:0019238,GO:0034641,GO:0042364,GO:0042726,GO:0042727,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576	3.5.4.25,4.1.99.12	ko:K14652	ko00740,ko00790,ko01100,ko01110,map00740,map00790,map01100,map01110	M00125,M00840	R00425,R07281	RC00293,RC01792,RC01815,RC02504	ko00000,ko00001,ko00002,ko01000	-	-	iSB619.SA_RS08945	DHBP_synthase,GTP_cyclohydro2
DYD3_k127_1802371_6	1353529.M899_0014	5.536e-60	214.0	COG0307@1|root,COG0307@2|Bacteria,1MUMB@1224|Proteobacteria,42QT1@68525|delta/epsilon subdivisions,2MU8C@213481|Bdellovibrionales,2WNK6@28221|Deltaproteobacteria	213481|Bdellovibrionales	H	riboflavin synthase, alpha subunit	ribE	-	2.5.1.9	ko:K00793	ko00740,ko01100,ko01110,map00740,map01100,map01110	M00125	R00066	RC00958,RC00960	ko00000,ko00001,ko00002,ko01000	-	-	-	Lum_binding
DYD3_k127_1802371_3	1353529.M899_0013	4.835e-87	299.0	COG0117@1|root,COG1985@1|root,COG0117@2|Bacteria,COG1985@2|Bacteria,1MUWT@1224|Proteobacteria,42NBS@68525|delta/epsilon subdivisions,2MU0C@213481|Bdellovibrionales,2WIP2@28221|Deltaproteobacteria	213481|Bdellovibrionales	H	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate	ribD	-	1.1.1.193,3.5.4.26	ko:K11752	ko00740,ko01100,ko01110,ko02024,map00740,map01100,map01110,map02024	M00125	R03458,R03459	RC00204,RC00933	ko00000,ko00001,ko00002,ko01000	-	-	iAF987.Gmet_1624	RibD_C,dCMP_cyt_deam_1
DYD3_k127_1802371_2	862908.BMS_2018	1.059e-87	299.0	COG4974@1|root,COG4974@2|Bacteria	2|Bacteria	L	Belongs to the 'phage' integrase family	xerD	-	-	ko:K04763	-	-	-	-	ko00000,ko03036	-	-	-	Phage_int_SAM_1,Phage_int_SAM_4,Phage_integrase
DYD3_k127_1802371_0	264462.Bd1414	6.303e-212	670.0	COG0488@1|root,COG0488@2|Bacteria,1MU37@1224|Proteobacteria,42M2A@68525|delta/epsilon subdivisions,2MSM6@213481|Bdellovibrionales,2WIJY@28221|Deltaproteobacteria	213481|Bdellovibrionales	S	ABC transporter	-	-	-	ko:K06158	-	-	-	-	ko00000,ko03012	-	-	-	ABC_tran,ABC_tran_Xtn
DYD3_k127_1802371_7	1201288.M900_A0324	9.17e-29	118.0	COG0664@1|root,COG0664@2|Bacteria,1NHNS@1224|Proteobacteria,42X3Y@68525|delta/epsilon subdivisions,2MT9B@213481|Bdellovibrionales,2WT4M@28221|Deltaproteobacteria	213481|Bdellovibrionales	T	cyclic nucleotide-binding	-	-	-	ko:K03321,ko:K10914	ko02020,ko02024,ko02025,ko02026,ko05111,map02020,map02024,map02025,map02026,map05111	-	-	-	ko00000,ko00001,ko02000,ko03000	2.A.53.3	-	-	FliG_C,cNMP_binding
DYD3_k127_1808916_2	862908.BMS_1881	2.657e-26	115.0	COG0512@1|root,COG0512@2|Bacteria,1RI23@1224|Proteobacteria,42ZWC@68525|delta/epsilon subdivisions,2MUHC@213481|Bdellovibrionales,2WT4F@28221|Deltaproteobacteria	213481|Bdellovibrionales	EH	Glutamine amidotransferase class-I	-	-	-	-	-	-	-	-	-	-	-	-	GATase
DYD3_k127_1808916_0	1353529.M899_1556	2.195e-165	549.0	COG1452@1|root,COG1452@2|Bacteria,1MUJC@1224|Proteobacteria,42N34@68525|delta/epsilon subdivisions,2MT4W@213481|Bdellovibrionales,2WJUD@28221|Deltaproteobacteria	213481|Bdellovibrionales	M	Involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane	lptD	-	-	ko:K04744	-	-	-	-	ko00000,ko02000	1.B.42.1	-	iAF987.Gmet_2474	OstA,OstA_2,OstA_C
DYD3_k127_1808916_3	1034943.BN1094_02668	2.051e-24	116.0	COG0285@1|root,COG0285@2|Bacteria,1MVCH@1224|Proteobacteria,1RMB0@1236|Gammaproteobacteria,1JD38@118969|Legionellales	118969|Legionellales	H	Belongs to the folylpolyglutamate synthase family	folC	-	6.3.2.12,6.3.2.17	ko:K11754	ko00790,ko01100,map00790,map01100	M00126,M00841	R00942,R02237,R04241	RC00064,RC00090,RC00162	ko00000,ko00001,ko00002,ko01000	-	-	-	Mur_ligase_M
DYD3_k127_1808916_1	1353529.M899_1554	5.789e-127	412.0	COG0777@1|root,COG0777@2|Bacteria,1MW8G@1224|Proteobacteria,42MAB@68525|delta/epsilon subdivisions,2WK95@28221|Deltaproteobacteria	28221|Deltaproteobacteria	I	Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA	accD	-	2.1.3.15,6.4.1.2	ko:K01963	ko00061,ko00620,ko00640,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00061,map00620,map00640,map00720,map01100,map01110,map01120,map01130,map01200,map01212	M00082,M00376	R00742,R04386	RC00040,RC00253,RC00367	ko00000,ko00001,ko00002,ko01000	-	-	-	Carboxyl_trans
DYD3_k127_180911_2	573370.DMR_43760	4.388e-25	106.0	COG0513@1|root,COG0513@2|Bacteria,1MU49@1224|Proteobacteria,42MGZ@68525|delta/epsilon subdivisions,2WIY6@28221|Deltaproteobacteria,2M7YC@213115|Desulfovibrionales	28221|Deltaproteobacteria	L	DEAD DEAH box helicase domain protein	rhlE-2	-	3.6.4.13	ko:K11927	ko03018,map03018	-	-	-	ko00000,ko00001,ko01000,ko03019	-	-	-	DEAD,Helicase_C
DYD3_k127_180911_1	1201290.M902_1086	2.599e-50	181.0	COG0073@1|root,COG0073@2|Bacteria,1RGU7@1224|Proteobacteria,42TSP@68525|delta/epsilon subdivisions,2MUAC@213481|Bdellovibrionales,2WQQH@28221|Deltaproteobacteria	213481|Bdellovibrionales	J	Chaperone CsaA	csaA	-	-	ko:K06878	-	-	-	-	ko00000	-	-	-	tRNA_bind
DYD3_k127_180911_0	1095769.CAHF01000022_gene368	1.595e-151	492.0	COG0477@1|root,COG0477@2|Bacteria,1QTWJ@1224|Proteobacteria,2WGG4@28216|Betaproteobacteria,4795N@75682|Oxalobacteraceae	28216|Betaproteobacteria	EGP	Fungal trichothecene efflux pump (TRI12)	-	-	-	-	-	-	-	-	-	-	-	-	MFS_1
DYD3_k127_180911_3	1353529.M899_3016	2.015e-24	111.0	COG1450@1|root,COG1450@2|Bacteria	2|Bacteria	NU	protein transport across the cell outer membrane	gspD	-	-	ko:K02453,ko:K02666	ko03070,ko05111,map03070,map05111	M00331	-	-	ko00000,ko00001,ko00002,ko02035,ko02044	3.A.15,3.A.15.2	-	-	Secretin,Secretin_N
DYD3_k127_180911_4	1089551.KE386572_gene2299	1.793e-07	57.0	COG2326@1|root,COG2326@2|Bacteria,1MVE2@1224|Proteobacteria,2TSU8@28211|Alphaproteobacteria,4BS50@82117|unclassified Alphaproteobacteria	28211|Alphaproteobacteria	S	Polyphosphate kinase 2 (PPK2)	-	-	-	-	-	-	-	-	-	-	-	-	PPK2
DYD3_k127_1847001_2	103690.17135516	5.529e-35	141.0	COG4932@1|root,COG4932@2|Bacteria,1GIGN@1117|Cyanobacteria,1HKKY@1161|Nostocales	1117|Cyanobacteria	M	Cna protein B-type domain	-	-	-	-	-	-	-	-	-	-	-	-	DUF11,SdrD_B
DYD3_k127_1847001_5	164328.Phyra39393	4.288e-26	121.0	2C5PI@1|root,2SKFW@2759|Eukaryota,3QE8A@4776|Peronosporales	4776|Peronosporales	S	Transglutaminase elicitor	-	-	-	-	-	-	-	-	-	-	-	-	TGase_elicitor
DYD3_k127_1847001_0	1185653.A1A1_07457	1.387e-64	230.0	COG0596@1|root,COG0596@2|Bacteria,1UZ7K@1239|Firmicutes,4HCZB@91061|Bacilli,26GAH@186818|Planococcaceae	91061|Bacilli	S	Alpha beta hydrolase	yfhM	-	3.8.1.5	ko:K01563	ko00361,ko00625,ko01100,ko01120,map00361,map00625,map01100,map01120	-	R05284,R05367,R05368,R05369,R05370,R07669,R07670	RC01317,RC01340,RC01341,RC02013	ko00000,ko00001,ko01000	-	-	-	Abhydrolase_1
DYD3_k127_1847001_3	1002809.SSIL_3609	1.599e-34	138.0	COG2032@1|root,COG2032@2|Bacteria,1V3HM@1239|Firmicutes,4HH2Q@91061|Bacilli,26ICD@186818|Planococcaceae	91061|Bacilli	P	Copper/zinc superoxide dismutase (SODC)	-	-	1.15.1.1	ko:K04565	ko04146,ko04213,ko05014,ko05016,ko05020,map04146,map04213,map05014,map05016,map05020	-	-	-	ko00000,ko00001,ko01000	-	-	-	Sod_Cu
DYD3_k127_1847001_4	247490.KSU1_D0155	4.045e-27	114.0	COG1145@1|root,32UJ7@2|Bacteria,2J4X7@203682|Planctomycetes	2|Bacteria	C	Ferredoxin	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_1847001_6	1038858.AXBA01000024_gene4068	2.409e-23	108.0	COG0671@1|root,COG0671@2|Bacteria,1R91F@1224|Proteobacteria,2U31R@28211|Alphaproteobacteria	28211|Alphaproteobacteria	I	Acid phosphatase homologues	-	-	3.1.3.2	ko:K09474	ko00740,ko01100,ko02020,map00740,map01100,map02020	-	R00548	RC00017	ko00000,ko00001,ko01000	-	-	-	PAP2
DYD3_k127_1847001_1	1353529.M899_0911	4.578e-53	200.0	COG3591@1|root,COG3591@2|Bacteria,1NP6U@1224|Proteobacteria,42ZKY@68525|delta/epsilon subdivisions,2MTXG@213481|Bdellovibrionales,2WUS6@28221|Deltaproteobacteria	213481|Bdellovibrionales	E	Belongs to the peptidase S1B family	-	-	-	-	-	-	-	-	-	-	-	-	Trypsin_2
DYD3_k127_1847001_8	1122147.AUEH01000055_gene2564	0.0008372	50.0	2AYWY@1|root,31R2N@2|Bacteria,1UPXG@1239|Firmicutes,4IVCM@91061|Bacilli,3F66A@33958|Lactobacillaceae	91061|Bacilli	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_1847001_7	1267534.KB906757_gene780	1.377e-08	61.0	2DZXG@1|root,32VMH@2|Bacteria	2|Bacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_1849726_5	862908.BMS_2067	1.306e-34	135.0	COG5531@1|root,COG5531@2|Bacteria,1N3MD@1224|Proteobacteria,430NN@68525|delta/epsilon subdivisions,2MT6T@213481|Bdellovibrionales,2WVYS@28221|Deltaproteobacteria	213481|Bdellovibrionales	B	SWI complex, BAF60b domains	-	-	-	-	-	-	-	-	-	-	-	-	SWIB
DYD3_k127_1849726_0	264462.Bd2892	3.962e-202	634.0	COG0111@1|root,COG0111@2|Bacteria,1MU5Z@1224|Proteobacteria,42M1C@68525|delta/epsilon subdivisions,2MTPS@213481|Bdellovibrionales,2WIZQ@28221|Deltaproteobacteria	213481|Bdellovibrionales	C	D-isomer specific 2-hydroxyacid dehydrogenase	serA	-	1.1.1.399,1.1.1.95	ko:K00058	ko00260,ko00680,ko01100,ko01120,ko01130,ko01200,ko01230,map00260,map00680,map01100,map01120,map01130,map01200,map01230	M00020	R01513	RC00031	ko00000,ko00001,ko00002,ko01000,ko04147	-	-	-	2-Hacid_dh,2-Hacid_dh_C
DYD3_k127_1849726_3	59374.Fisuc_1930	9.471e-45	173.0	COG3093@1|root,COG3093@2|Bacteria	2|Bacteria	K	addiction module antidote protein HigA	-	-	-	ko:K07110,ko:K21686	-	-	-	-	ko00000,ko03000	-	-	-	DUF2083,DUF4423,HTH_3,HTH_31,Peptidase_M78
DYD3_k127_1849726_1	927677.ALVU02000001_gene2236	1.635e-134	445.0	COG0477@1|root,COG0477@2|Bacteria,1G155@1117|Cyanobacteria	1117|Cyanobacteria	EGP	Major Facilitator Superfamily	-	-	-	-	-	-	-	-	-	-	-	-	MFS_1
DYD3_k127_1849726_7	1121898.Q766_02760	1.412e-08	60.0	2BJ05@1|root,32D8Q@2|Bacteria,4PDAC@976|Bacteroidetes,1INDC@117743|Flavobacteriia,2NZ5R@237|Flavobacterium	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_1849726_2	1244869.H261_09899	4.314e-125	407.0	COG5265@1|root,COG5265@2|Bacteria,1NSKS@1224|Proteobacteria,2UQAG@28211|Alphaproteobacteria,2JR6D@204441|Rhodospirillales	204441|Rhodospirillales	V	COG5265 ABC-type transport system involved in Fe-S cluster assembly, permease and ATPase components	-	-	-	ko:K06147	-	-	-	-	ko00000,ko02000	3.A.1.106,3.A.1.109,3.A.1.21	-	-	ABC_membrane,ABC_tran
DYD3_k127_1896369_0	862908.BMS_1134	1.15e-91	308.0	COG0266@1|root,COG0266@2|Bacteria,1MVM5@1224|Proteobacteria,42T7F@68525|delta/epsilon subdivisions,2MT5B@213481|Bdellovibrionales,2WP8W@28221|Deltaproteobacteria	213481|Bdellovibrionales	L	Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates	fpg	-	3.2.2.23,4.2.99.18	ko:K10563	ko03410,map03410	-	-	-	ko00000,ko00001,ko01000,ko03400	-	-	-	Fapy_DNA_glyco,H2TH,zf-FPG_IleRS
DYD3_k127_1896369_2	998674.ATTE01000001_gene1339	5.343e-77	267.0	COG2850@1|root,COG2850@2|Bacteria	2|Bacteria	P	peptidyl-arginine hydroxylation	yxbC	GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0018193,GO:0018195,GO:0019538,GO:0030961,GO:0036211,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0071704,GO:1901564	1.14.11.47	ko:K18850	-	-	-	-	ko00000,ko01000,ko03009	-	-	-	Cupin_4
DYD3_k127_1896369_1	1201288.M900_0982	5.286e-90	307.0	COG1161@1|root,COG1161@2|Bacteria,1MV5H@1224|Proteobacteria,42N0B@68525|delta/epsilon subdivisions,2WN21@28221|Deltaproteobacteria	28221|Deltaproteobacteria	S	Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity	ylqF	-	-	ko:K14540	-	-	-	-	ko00000,ko03009	-	-	-	MMR_HSR1
DYD3_k127_1896369_3	862908.BMS_0285	8.171e-50	186.0	COG0501@1|root,COG0501@2|Bacteria,1P1RT@1224|Proteobacteria,431Z3@68525|delta/epsilon subdivisions,2MUC9@213481|Bdellovibrionales,2WWGS@28221|Deltaproteobacteria	213481|Bdellovibrionales	O	Belongs to the peptidase M48B family	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_200130_2	305700.B447_01476	0.0002798	45.0	COG3310@1|root,COG3310@2|Bacteria,1RDE0@1224|Proteobacteria,2VQ9D@28216|Betaproteobacteria,2KW6Y@206389|Rhodocyclales	206389|Rhodocyclales	S	Protein of unknown function (DUF1415)	-	-	-	ko:K09941	-	-	-	-	ko00000	-	-	-	DUF1415
DYD3_k127_200130_0	1184267.A11Q_424	5.88e-107	356.0	COG0697@1|root,COG0697@2|Bacteria,1N239@1224|Proteobacteria,4310T@68525|delta/epsilon subdivisions	1224|Proteobacteria	EG	EamA-like transporter family	-	-	-	-	-	-	-	-	-	-	-	-	EamA
DYD3_k127_200130_1	1005048.CFU_1853	2.933e-63	227.0	COG2358@1|root,COG2358@2|Bacteria,1PNJV@1224|Proteobacteria,2VI8H@28216|Betaproteobacteria,473TS@75682|Oxalobacteraceae	28216|Betaproteobacteria	S	transport system, periplasmic component	-	-	-	-	-	-	-	-	-	-	-	-	NMT1_3
DYD3_k127_2005275_2	1237149.C900_04673	7.302e-38	145.0	COG0244@1|root,COG0244@2|Bacteria,4NFFK@976|Bacteroidetes,47JGP@768503|Cytophagia	976|Bacteroidetes	J	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors	rplJ	-	-	ko:K02864	ko03010,map03010	M00178,M00179	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_L10
DYD3_k127_2005275_1	1237149.C900_04674	4.759e-50	181.0	COG0222@1|root,COG0222@2|Bacteria,4NQAQ@976|Bacteroidetes,47PSQ@768503|Cytophagia	976|Bacteroidetes	J	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation	rplL	-	-	ko:K02935	ko03010,map03010	M00178	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_L12,Ribosomal_L12_N
DYD3_k127_2005275_0	1237149.C900_04675	0.0	1786.0	COG0085@1|root,COG0085@2|Bacteria,4NF8D@976|Bacteroidetes,47JXH@768503|Cytophagia	976|Bacteroidetes	K	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates	rpoB	GO:0000428,GO:0005575,GO:0005622,GO:0005623,GO:0030880,GO:0032991,GO:0044424,GO:0044464,GO:0061695,GO:1902494,GO:1990234	2.7.7.6	ko:K03043	ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020	M00183	R00435,R00441,R00442,R00443	RC02795	br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400	-	-	-	RNA_pol_Rpb2_1,RNA_pol_Rpb2_2,RNA_pol_Rpb2_3,RNA_pol_Rpb2_45,RNA_pol_Rpb2_6,RNA_pol_Rpb2_7
DYD3_k127_2026490_28	1128912.GMES_0380	1.914e-14	79.0	COG0847@1|root,COG0847@2|Bacteria,1MV8Z@1224|Proteobacteria,1T3CM@1236|Gammaproteobacteria,46DAI@72275|Alteromonadaceae	1236|Gammaproteobacteria	L	VRR_NUC	-	-	2.7.7.7	ko:K02342	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	M00260	R00375,R00376,R00377,R00378	RC02795	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	-	-	-	GIY-YIG,RNase_T,VRR_NUC
DYD3_k127_2026490_29	641491.DND132_2624	3.66e-14	77.0	COG1974@1|root,COG1974@2|Bacteria,1MZFA@1224|Proteobacteria,42T6V@68525|delta/epsilon subdivisions,2WPNI@28221|Deltaproteobacteria,2MC1S@213115|Desulfovibrionales	28221|Deltaproteobacteria	L	Belongs to the peptidase S24 family	umuD	-	-	ko:K03503	-	-	-	-	ko00000,ko01000,ko01002,ko03400	-	-	-	Peptidase_S24
DYD3_k127_2026490_9	269798.CHU_1492	1.034e-104	353.0	COG0389@1|root,COG0389@2|Bacteria,4NGPH@976|Bacteroidetes,47KI6@768503|Cytophagia	976|Bacteroidetes	L	Nucleotidyltransferase DNA polymerase involved in DNA repair	umuC3	-	-	ko:K03502	-	-	-	-	ko00000,ko03400	-	-	-	DUF4113,IMS,IMS_C,IMS_HHH
DYD3_k127_2026490_12	1184267.A11Q_257	1.273e-59	218.0	COG0492@1|root,COG0492@2|Bacteria,1MVWS@1224|Proteobacteria,42YY5@68525|delta/epsilon subdivisions,2MTM0@213481|Bdellovibrionales,2WPYC@28221|Deltaproteobacteria	213481|Bdellovibrionales	C	Pyridine nucleotide-disulphide oxidoreductase	-	-	-	-	-	-	-	-	-	-	-	-	Pyr_redox_2
DYD3_k127_2026490_13	1403819.BATR01000137_gene4842	2.067e-57	211.0	COG0583@1|root,COG0583@2|Bacteria	2|Bacteria	K	DNA-binding transcription factor activity	-	-	-	ko:K21757	-	-	-	-	ko00000,ko03000	-	-	-	HTH_1,LysR_substrate
DYD3_k127_2026490_10	264462.Bd2040	6.728e-91	304.0	COG1011@1|root,COG1011@2|Bacteria,1MVF8@1224|Proteobacteria,42XTZ@68525|delta/epsilon subdivisions,2MSYE@213481|Bdellovibrionales,2WSNH@28221|Deltaproteobacteria	213481|Bdellovibrionales	S	HAD-hyrolase-like	-	-	3.8.1.2	ko:K01560,ko:K07025	ko00361,ko00625,ko01100,ko01120,map00361,map00625,map01100,map01120	-	R05287	RC00697	ko00000,ko00001,ko01000	-	-	-	HAD_2
DYD3_k127_2026490_27	1123399.AQVE01000008_gene1496	3.226e-20	95.0	COG3238@1|root,COG3238@2|Bacteria,1MZFD@1224|Proteobacteria,1SA7V@1236|Gammaproteobacteria	1236|Gammaproteobacteria	S	Putative inner membrane exporter, YdcZ	-	-	-	ko:K09936	ko02024,map02024	-	-	-	ko00000,ko00001,ko02000	2.A.7.21	-	-	DMT_YdcZ
DYD3_k127_2026490_24	579405.Dd703_2131	8.906e-22	100.0	COG3238@1|root,COG3238@2|Bacteria,1N843@1224|Proteobacteria,1SDM4@1236|Gammaproteobacteria	1236|Gammaproteobacteria	S	Putative inner membrane exporter, YdcZ	-	-	-	ko:K09936	ko02024,map02024	-	-	-	ko00000,ko00001,ko02000	2.A.7.21	-	-	DMT_YdcZ
DYD3_k127_2026490_5	929703.KE386491_gene2058	2.321e-122	406.0	COG0477@1|root,COG2814@2|Bacteria,4NG6X@976|Bacteroidetes,47KCB@768503|Cytophagia	976|Bacteroidetes	EGP	TIGRFAM Drug resistance transporter Bcr CflA subfamily	bcr	-	-	ko:K03446,ko:K07552	-	M00701	-	-	ko00000,ko00002,ko02000	2.A.1.2,2.A.1.3	-	-	MFS_1
DYD3_k127_2026490_3	264462.Bd2378	8.517e-142	463.0	COG0038@1|root,COG0038@2|Bacteria,1MV4K@1224|Proteobacteria,42PJQ@68525|delta/epsilon subdivisions,2MU2J@213481|Bdellovibrionales,2WKR4@28221|Deltaproteobacteria	213481|Bdellovibrionales	P	Chloride channel	-	-	-	ko:K03281	-	-	-	-	ko00000	2.A.49	-	-	CBS,Voltage_CLC
DYD3_k127_2026490_8	216594.MMAR_3023	5.199e-109	359.0	COG3781@1|root,COG3781@2|Bacteria,2I939@201174|Actinobacteria,238XI@1762|Mycobacteriaceae	201174|Actinobacteria	S	Bestrophin, RFP-TM, chloride channel	-	-	-	ko:K08994	-	-	-	-	ko00000,ko02000	1.A.46.2	-	-	Bestrophin
DYD3_k127_2026490_19	1208323.B30_06701	4.415e-39	148.0	COG2076@1|root,COG2076@2|Bacteria,1MZ54@1224|Proteobacteria,2UBXR@28211|Alphaproteobacteria	28211|Alphaproteobacteria	P	COG2076 Membrane transporters of cations and cationic drugs	qacE	-	-	ko:K03297	-	-	-	-	ko00000,ko02000	2.A.7.1	-	-	Multi_Drug_Res
DYD3_k127_2026490_15	1189612.A33Q_2960	4.35e-48	183.0	COG2267@1|root,COG2267@2|Bacteria,4NIU9@976|Bacteroidetes,47PWX@768503|Cytophagia	976|Bacteroidetes	I	Serine aminopeptidase, S33	ytpA	-	-	-	-	-	-	-	-	-	-	-	Hydrolase_4
DYD3_k127_2026490_31	232721.Ajs_2266	4.938e-12	72.0	COG3832@1|root,COG3832@2|Bacteria,1RCZK@1224|Proteobacteria,2VR7G@28216|Betaproteobacteria,4ADZG@80864|Comamonadaceae	28216|Betaproteobacteria	S	Activator of Hsp90 ATPase 1 family protein	-	-	-	-	-	-	-	-	-	-	-	-	AHSA1
DYD3_k127_2026490_26	110365.A0A023B1Z5	3.733e-21	109.0	COG0664@1|root,KOG1113@2759|Eukaryota,3Y9W7@5794|Apicomplexa	5794|Apicomplexa	T	CAMP-dependent protein kinase regulatory subunit	-	-	-	ko:K04739	ko04910,map04910	-	-	-	ko00000,ko00001	-	-	-	cNMP_binding
DYD3_k127_2026490_18	1453498.LG45_08880	3.27e-41	157.0	COG4430@1|root,COG4430@2|Bacteria,4NNT1@976|Bacteroidetes,1I3HQ@117743|Flavobacteriia,2NWF4@237|Flavobacterium	976|Bacteroidetes	S	Domain of unknown function (DUF1905)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1905,OmdA
DYD3_k127_2026490_25	1121890.AUDO01000001_gene623	1.683e-21	95.0	COG3530@1|root,COG3530@2|Bacteria,4NUSP@976|Bacteroidetes,1I50I@117743|Flavobacteriia,2NX50@237|Flavobacterium	976|Bacteroidetes	S	Putative quorum-sensing-regulated virulence factor	-	-	-	ko:K09954	-	-	-	-	ko00000	-	-	-	QSregVF_b
DYD3_k127_2026490_20	485913.Krac_9387	1.158e-32	132.0	COG4319@1|root,COG4319@2|Bacteria	2|Bacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	FMN_red,SnoaL_3
DYD3_k127_2026490_7	1121373.KB903665_gene3094	6.542e-120	399.0	COG3515@1|root,COG3515@2|Bacteria	2|Bacteria	M	Protein conserved in bacteria	-	-	-	ko:K11891,ko:K11902,ko:K11910	ko02025,ko03070,map02025,map03070	M00334	-	-	ko00000,ko00001,ko00002,ko02044	3.A.23.1	-	-	ImcF-related_N,ImpA_N,OmpA
DYD3_k127_2026490_11	765869.BDW_13360	2.905e-79	267.0	COG0221@1|root,COG0221@2|Bacteria,1RA2F@1224|Proteobacteria,42MQB@68525|delta/epsilon subdivisions,2WPIA@28221|Deltaproteobacteria	28221|Deltaproteobacteria	C	Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions	ppa	-	3.6.1.1	ko:K01507	ko00190,map00190	-	-	-	ko00000,ko00001,ko01000	-	-	-	Pyrophosphatase
DYD3_k127_2026490_23	1123355.JHYO01000001_gene3305	4.362e-22	106.0	COG0596@1|root,COG0596@2|Bacteria,1PHK9@1224|Proteobacteria,2V8RG@28211|Alphaproteobacteria,370ZS@31993|Methylocystaceae	28211|Alphaproteobacteria	S	Serine aminopeptidase, S33	-	-	-	-	-	-	-	-	-	-	-	-	Abhydrolase_1
DYD3_k127_2026490_17	1201288.M900_0751	8.075e-42	162.0	COG0727@1|root,COG0727@2|Bacteria,1PCRF@1224|Proteobacteria,42XX7@68525|delta/epsilon subdivisions,2MUJJ@213481|Bdellovibrionales,2WY0N@28221|Deltaproteobacteria	213481|Bdellovibrionales	S	Putative zinc- or iron-chelating domain	-	-	-	-	-	-	-	-	-	-	-	-	CxxCxxCC
DYD3_k127_2026490_21	1201290.M902_0453	2.024e-28	116.0	COG0760@1|root,COG0760@2|Bacteria,1MZDK@1224|Proteobacteria,42TQU@68525|delta/epsilon subdivisions,2MTFS@213481|Bdellovibrionales,2WQ3A@28221|Deltaproteobacteria	213481|Bdellovibrionales	O	Peptidyl-prolyl cis-trans isomerase	ppiC	-	5.2.1.8	ko:K01802,ko:K03769	-	-	-	-	ko00000,ko01000,ko03110	-	-	-	Rotamase,Rotamase_3,SseB
DYD3_k127_2026490_14	1184267.A11Q_2491	2.684e-53	192.0	COG1522@1|root,COG1522@2|Bacteria,1MX7R@1224|Proteobacteria,42WDC@68525|delta/epsilon subdivisions,2MUHY@213481|Bdellovibrionales,2WRM7@28221|Deltaproteobacteria	213481|Bdellovibrionales	K	helix_turn_helix ASNC type	-	-	-	ko:K03719	-	-	-	-	ko00000,ko03000,ko03036	-	-	-	AsnC_trans_reg,HTH_24
DYD3_k127_2026490_16	521000.PROVRETT_06257	3.984e-45	174.0	COG4413@1|root,COG4413@2|Bacteria,1MW42@1224|Proteobacteria,1RY06@1236|Gammaproteobacteria	1236|Gammaproteobacteria	E	urea transporter	yut	-	-	ko:K08717	-	-	-	-	ko00000,ko02000	1.A.28.2	-	-	UT
DYD3_k127_2026490_33	272626.lin2125	2.292e-06	58.0	COG0671@1|root,COG0671@2|Bacteria,1VF2U@1239|Firmicutes,4HJ5B@91061|Bacilli,26KDD@186820|Listeriaceae	91061|Bacilli	I	Acid phosphatase homologues	-	-	3.6.1.27	ko:K19302	ko00550,map00550	-	R05627	RC00002	ko00000,ko00001,ko01000,ko01011	-	-	-	PAP2
DYD3_k127_2026490_0	378806.STAUR_0548	5.7e-154	494.0	COG0667@1|root,COG0667@2|Bacteria,1MV2Y@1224|Proteobacteria,43475@68525|delta/epsilon subdivisions,2X27R@28221|Deltaproteobacteria,2YXCB@29|Myxococcales	28221|Deltaproteobacteria	C	Aldo/keto reductase family	mocA	-	-	-	-	-	-	-	-	-	-	-	Aldo_ket_red
DYD3_k127_2026490_4	522306.CAP2UW1_2446	3.685e-132	432.0	COG3135@1|root,COG3135@2|Bacteria,1MUS1@1224|Proteobacteria,2VIN0@28216|Betaproteobacteria	28216|Betaproteobacteria	Q	PFAM Benzoate membrane transport protein	benE	-	-	ko:K05782	-	-	-	-	ko00000,ko02000	2.A.46.1	-	-	BenE
DYD3_k127_2026490_1	1449049.JONW01000005_gene1171	7.239e-144	466.0	COG2911@1|root,COG2911@2|Bacteria,1NHQB@1224|Proteobacteria,2TZ4U@28211|Alphaproteobacteria	28211|Alphaproteobacteria	S	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane	-	-	-	-	-	-	-	-	-	-	-	-	Porin_2
DYD3_k127_2026490_6	1397527.Q670_04240	7.248e-121	397.0	COG2066@1|root,COG2066@2|Bacteria,1MWB5@1224|Proteobacteria,1RMY9@1236|Gammaproteobacteria,1XHZG@135619|Oceanospirillales	135619|Oceanospirillales	E	Belongs to the glutaminase family	glsA	-	3.5.1.2	ko:K01425	ko00220,ko00250,ko00471,ko01100,ko04724,ko04727,ko04964,ko05206,ko05230,map00220,map00250,map00471,map01100,map04724,map04727,map04964,map05206,map05230	-	R00256,R01579	RC00010,RC02798	ko00000,ko00001,ko01000	-	-	-	Glutaminase
DYD3_k127_2026490_2	234267.Acid_0447	5.238e-142	457.0	COG2159@1|root,COG2159@2|Bacteria,3Y7DZ@57723|Acidobacteria	57723|Acidobacteria	S	PFAM amidohydrolase	-	-	-	-	-	-	-	-	-	-	-	-	Amidohydro_2
DYD3_k127_2073228_22	502025.Hoch_4471	4.441e-17	83.0	COG0636@1|root,COG0636@2|Bacteria,1QAIF@1224|Proteobacteria,43A8Y@68525|delta/epsilon subdivisions,2X9Z1@28221|Deltaproteobacteria,2YW38@29|Myxococcales	28221|Deltaproteobacteria	C	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation	atpE	-	-	ko:K02110	ko00190,ko00195,ko01100,map00190,map00195,map01100	M00157	-	-	ko00000,ko00001,ko00002,ko00194	3.A.2.1	-	-	ATP-synt_C
DYD3_k127_2073228_14	1201288.M900_0009	7.234e-79	271.0	COG0356@1|root,COG0356@2|Bacteria,1MV87@1224|Proteobacteria,42NR9@68525|delta/epsilon subdivisions,2MT1Y@213481|Bdellovibrionales,2WKX1@28221|Deltaproteobacteria	213481|Bdellovibrionales	C	it plays a direct role in the translocation of protons across the membrane	atpB	GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0005886,GO:0005887,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0008324,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015399,GO:0015405,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016021,GO:0016462,GO:0016469,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0031224,GO:0031226,GO:0032991,GO:0033177,GO:0034220,GO:0034641,GO:0034654,GO:0042623,GO:0042625,GO:0042626,GO:0042777,GO:0043492,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0044769,GO:0045259,GO:0045263,GO:0046034,GO:0046390,GO:0046483,GO:0046933,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0071944,GO:0072521,GO:0072522,GO:0090407,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0099131,GO:0099132,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600	-	ko:K02108	ko00190,ko00195,ko01100,map00190,map00195,map01100	M00157	-	-	ko00000,ko00001,ko00002,ko00194,ko03110	3.A.2.1	-	-	ATP-synt_A
DYD3_k127_2073228_15	862908.BMS_0006	4.723e-67	237.0	COG0457@1|root,COG0457@2|Bacteria	862908.BMS_0006|-	S	peptidyl-tyrosine sulfation	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_2073228_0	796606.BMMGA3_00030	4.593e-287	903.0	COG0188@1|root,COG0188@2|Bacteria,1TP2Z@1239|Firmicutes,4HAHY@91061|Bacilli,1ZB8F@1386|Bacillus	91061|Bacilli	L	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner	gyrA	-	5.99.1.3	ko:K02469	-	-	-	-	ko00000,ko01000,ko03032,ko03400	-	-	-	DNA_gyraseA_C,DNA_topoisoIV
DYD3_k127_2073228_3	686340.Metal_0007	4.26e-256	814.0	COG0187@1|root,COG0187@2|Bacteria,1MVKT@1224|Proteobacteria,1RNB2@1236|Gammaproteobacteria,1XEQA@135618|Methylococcales	135618|Methylococcales	L	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner	gyrB	-	5.99.1.3	ko:K02470	-	-	-	-	ko00000,ko01000,ko03032,ko03400	-	-	-	DNA_gyraseB,DNA_gyraseB_C,HATPase_c,Toprim
DYD3_k127_2073228_9	1353529.M899_0003	4.331e-116	384.0	COG1195@1|root,COG1195@2|Bacteria,1MX8N@1224|Proteobacteria,42SYJ@68525|delta/epsilon subdivisions,2MTAS@213481|Bdellovibrionales,2WP80@28221|Deltaproteobacteria	213481|Bdellovibrionales	L	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP	recF	GO:0000731,GO:0006139,GO:0006259,GO:0006281,GO:0006302,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0018130,GO:0019438,GO:0033554,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0071897,GO:0090304,GO:1901360,GO:1901362,GO:1901576	-	ko:K03629	ko03440,map03440	-	-	-	ko00000,ko00001,ko03400	-	-	-	SMC_N
DYD3_k127_2073228_4	862908.BMS_0002	9.658e-137	444.0	COG0592@1|root,COG0592@2|Bacteria,1MVD9@1224|Proteobacteria,42NQW@68525|delta/epsilon subdivisions,2MSVN@213481|Bdellovibrionales,2WJZM@28221|Deltaproteobacteria	213481|Bdellovibrionales	L	Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria	dnaN	-	2.7.7.7	ko:K02338	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	M00260	R00375,R00376,R00377,R00378	RC02795	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	-	-	-	DNA_pol3_beta,DNA_pol3_beta_2,DNA_pol3_beta_3
DYD3_k127_2073228_5	1353529.M899_0001	2.894e-135	448.0	COG0593@1|root,COG0593@2|Bacteria,1MU5H@1224|Proteobacteria,42MA0@68525|delta/epsilon subdivisions,2MSVX@213481|Bdellovibrionales,2WJAT@28221|Deltaproteobacteria	213481|Bdellovibrionales	L	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids	dnaA	GO:0003674,GO:0003676,GO:0003677,GO:0003688,GO:0003690,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006270,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0016020,GO:0034641,GO:0034645,GO:0043170,GO:0043565,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0071944,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901576,GO:1990837	-	ko:K02313	ko02020,ko04112,map02020,map04112	-	-	-	ko00000,ko00001,ko03032,ko03036	-	-	-	Bac_DnaA,Bac_DnaA_C,DnaA_N
DYD3_k127_2073228_23	862908.BMS_3450	1.145e-15	78.0	COG0230@1|root,COG0230@2|Bacteria,1Q80X@1224|Proteobacteria,43A9P@68525|delta/epsilon subdivisions,2MTCB@213481|Bdellovibrionales,2XA1B@28221|Deltaproteobacteria	213481|Bdellovibrionales	J	Ribosomal protein L34	rpmH	-	-	ko:K02914	ko03010,map03010	M00178	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_L34
DYD3_k127_2073228_26	443254.Marpi_0812	7.004e-07	55.0	COG0594@1|root,COG0594@2|Bacteria,2GDER@200918|Thermotogae	200918|Thermotogae	J	RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme	rnpA	-	3.1.26.5	ko:K03536	-	-	-	-	ko00000,ko01000,ko03016	-	-	-	Ribonuclease_P
DYD3_k127_2073228_20	1219626.HMPREF1639_04225	1.92e-25	106.0	COG0759@1|root,COG0759@2|Bacteria,1VEIG@1239|Firmicutes,24QN4@186801|Clostridia,25RU5@186804|Peptostreptococcaceae	186801|Clostridia	S	Could be involved in insertion of integral membrane proteins into the membrane	yidD	-	-	ko:K08998	-	-	-	-	ko00000	-	-	-	Haemolytic
DYD3_k127_2073228_7	1353529.M899_3519	5.476e-129	427.0	COG0706@1|root,COG0706@2|Bacteria,1MV5M@1224|Proteobacteria,42MS8@68525|delta/epsilon subdivisions,2MSX2@213481|Bdellovibrionales,2WJB6@28221|Deltaproteobacteria	213481|Bdellovibrionales	U	Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins	yidC	-	-	ko:K03217	ko02024,ko03060,ko03070,map02024,map03060,map03070	M00335	-	-	ko00000,ko00001,ko00002,ko02044,ko03029	2.A.9	-	-	60KD_IMP,YidC_periplas
DYD3_k127_2073228_8	1353529.M899_3518	3.574e-116	389.0	COG0486@1|root,COG0486@2|Bacteria,1MUCQ@1224|Proteobacteria,42M6T@68525|delta/epsilon subdivisions,2MT3B@213481|Bdellovibrionales,2WIWY@28221|Deltaproteobacteria	213481|Bdellovibrionales	J	Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34	mnmE	-	-	ko:K03650	-	-	R08701	RC00053,RC00209,RC00870	ko00000,ko01000,ko03016	-	-	-	MMR_HSR1,MnmE_helical,TrmE_N
DYD3_k127_2073228_6	760154.Sulba_1924	1.439e-132	444.0	COG0445@1|root,COG0445@2|Bacteria,1MU6F@1224|Proteobacteria,42KZC@68525|delta/epsilon subdivisions,2YM82@29547|Epsilonproteobacteria	29547|Epsilonproteobacteria	D	NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34	gidA	-	-	ko:K03495	-	-	R08701	RC00053,RC00209,RC00870	ko00000,ko03016,ko03036	-	-	-	GIDA,GIDA_assoc
DYD3_k127_2073228_17	1353529.M899_3516	2.67e-58	209.0	COG0357@1|root,COG0357@2|Bacteria	2|Bacteria	J	rRNA methyltransferase activity	gidB	-	2.1.1.170	ko:K03501	-	-	-	-	ko00000,ko01000,ko03009,ko03036	-	-	-	GidB,Methyltransf_32
DYD3_k127_2073228_11	1353529.M899_3515	1.667e-106	351.0	COG1192@1|root,COG1192@2|Bacteria,1MV43@1224|Proteobacteria,42MTF@68525|delta/epsilon subdivisions,2MSTE@213481|Bdellovibrionales,2WJ6X@28221|Deltaproteobacteria	213481|Bdellovibrionales	D	PFAM Cobyrinic acid ac-diamide synthase	soj	-	-	ko:K03496	-	-	-	-	ko00000,ko03036,ko04812	-	-	-	AAA_31
DYD3_k127_2073228_12	1201290.M902_1524	1.125e-102	342.0	COG1475@1|root,COG1475@2|Bacteria,1MW2E@1224|Proteobacteria,42M8S@68525|delta/epsilon subdivisions,2MSXG@213481|Bdellovibrionales,2WNG8@28221|Deltaproteobacteria	213481|Bdellovibrionales	K	Belongs to the ParB family	parB	-	-	ko:K03497	-	-	-	-	ko00000,ko03000,ko03036,ko04812	-	-	-	ParBc
DYD3_k127_2073228_18	1353529.M899_3513	5.125e-50	180.0	COG1664@1|root,COG1664@2|Bacteria,1N7TF@1224|Proteobacteria,42VWZ@68525|delta/epsilon subdivisions,2MTB5@213481|Bdellovibrionales,2WRPF@28221|Deltaproteobacteria	213481|Bdellovibrionales	M	Integral membrane protein CcmA involved in cell shape determination	-	-	-	-	-	-	-	-	-	-	-	-	Bactofilin
DYD3_k127_2073228_21	1201288.M900_2823	1.045e-23	108.0	COG0711@1|root,COG0711@2|Bacteria	2|Bacteria	C	ATP synthesis coupled proton transport	atpF	-	3.4.21.89	ko:K02109,ko:K03100,ko:K20444	ko00190,ko00195,ko01100,ko02024,ko03060,map00190,map00195,map01100,map02024,map03060	M00157	-	-	ko00000,ko00001,ko00002,ko00194,ko01000,ko01002,ko01005,ko02000	3.A.2.1,4.D.1.3	GT2,GT4	-	ATP-synt_B,Glyco_trans_1_4,Glyco_transf_4,Glycos_transf_2,OSCP,TIR_2,WD40
DYD3_k127_2073228_16	862908.BMS_3438	1.179e-61	216.0	COG0712@1|root,COG0712@2|Bacteria	2|Bacteria	C	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation	atpH	-	-	ko:K02113	ko00190,ko00195,ko01100,map00190,map00195,map01100	M00157	-	-	ko00000,ko00001,ko00002,ko00194	3.A.2.1	-	-	OSCP
DYD3_k127_2073228_1	1201288.M900_2821	1.272e-263	818.0	COG0056@1|root,COG0056@2|Bacteria,1MUG7@1224|Proteobacteria,42MVX@68525|delta/epsilon subdivisions,2MSSG@213481|Bdellovibrionales,2WIK7@28221|Deltaproteobacteria	213481|Bdellovibrionales	C	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit	atpA	-	3.6.3.14	ko:K02111	ko00190,ko00195,ko01100,map00190,map00195,map01100	M00157	-	-	ko00000,ko00001,ko00002,ko00194,ko01000	3.A.2.1	-	-	ATP-synt_ab,ATP-synt_ab_C,ATP-synt_ab_N
DYD3_k127_2073228_10	1353529.M899_3508	4.193e-110	362.0	COG0224@1|root,COG0224@2|Bacteria,1MU28@1224|Proteobacteria,42N8B@68525|delta/epsilon subdivisions,2MSZY@213481|Bdellovibrionales,2WJ6I@28221|Deltaproteobacteria	213481|Bdellovibrionales	C	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex	atpG	-	-	ko:K02115	ko00190,ko00195,ko01100,map00190,map00195,map01100	M00157	-	-	ko00000,ko00001,ko00002,ko00194	3.A.2.1	-	-	ATP-synt
DYD3_k127_2073228_2	1201288.M900_2819	1.621e-256	796.0	COG0055@1|root,COG0055@2|Bacteria,1MUFU@1224|Proteobacteria,42KZA@68525|delta/epsilon subdivisions,2MSPE@213481|Bdellovibrionales,2WJ1V@28221|Deltaproteobacteria	213481|Bdellovibrionales	C	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits	atpD	-	3.6.3.14	ko:K02112	ko00190,ko00195,ko01100,map00190,map00195,map01100	M00157	-	-	ko00000,ko00001,ko00002,ko00194,ko01000	3.A.2.1	-	-	ATP-synt_ab,ATP-synt_ab_N
DYD3_k127_2073228_25	1078083.HMPREF1208_02262	6.848e-12	71.0	COG0355@1|root,COG0355@2|Bacteria,1VA89@1239|Firmicutes,4HKHS@91061|Bacilli,4GYX7@90964|Staphylococcaceae	91061|Bacilli	C	Produces ATP from ADP in the presence of a proton gradient across the membrane	atpC	GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016469,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0032991,GO:0033178,GO:0034220,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044464,GO:0045259,GO:0045261,GO:0046034,GO:0046390,GO:0046483,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600	-	ko:K02114	ko00190,ko00195,ko01100,map00190,map00195,map01100	M00157	-	-	ko00000,ko00001,ko00002,ko00194	3.A.2.1	-	-	ATP-synt_DE,ATP-synt_DE_N
DYD3_k127_2073228_13	862908.BMS_3432	7.316e-90	311.0	COG0741@1|root,COG0741@2|Bacteria,1MWKE@1224|Proteobacteria,42QM3@68525|delta/epsilon subdivisions,2MU29@213481|Bdellovibrionales,2WKI2@28221|Deltaproteobacteria	213481|Bdellovibrionales	M	Membrane-bound lytic murein transglycosylase	-	-	-	ko:K08307	-	-	-	-	ko00000,ko01000,ko01011	-	-	-	SLT
DYD3_k127_2105911_7	543728.Vapar_4890	2.739e-42	171.0	COG0642@1|root,COG2770@1|root,COG2205@2|Bacteria,COG2770@2|Bacteria,1MUAK@1224|Proteobacteria,2VIS3@28216|Betaproteobacteria,4ACJ3@80864|Comamonadaceae	28216|Betaproteobacteria	T	Histidine kinase	-	-	-	-	-	-	-	-	-	-	-	-	HAMP,HATPase_c,HisKA
DYD3_k127_2105911_1	452637.Oter_0318	2.19e-76	262.0	COG0745@1|root,COG0745@2|Bacteria,46UQH@74201|Verrucomicrobia,3K9IM@414999|Opitutae	414999|Opitutae	K	Transcriptional regulatory protein, C terminal	-	-	-	-	-	-	-	-	-	-	-	-	Response_reg,Trans_reg_C
DYD3_k127_2105911_10	330214.NIDE0040	2.992e-11	70.0	COG3678@1|root,COG3678@2|Bacteria	2|Bacteria	NPTU	ATP-independent chaperone mediated protein folding	-	-	-	-	-	-	-	-	-	-	-	-	LTXXQ,Metal_resist
DYD3_k127_2105911_2	1201288.M900_0503	1.717e-75	260.0	COG0670@1|root,COG0670@2|Bacteria,1MU69@1224|Proteobacteria,42MWD@68525|delta/epsilon subdivisions,2WMG9@28221|Deltaproteobacteria	28221|Deltaproteobacteria	S	Belongs to the BI1 family	ybhL	-	-	ko:K06890,ko:K19416	-	M00742	-	-	ko00000,ko00002,ko02000	1.A.14.2.1	-	-	Bax1-I
DYD3_k127_2105911_9	1122132.AQYH01000016_gene2903	7.388e-24	108.0	COG3803@1|root,COG3803@2|Bacteria,1RHYI@1224|Proteobacteria,2U7AN@28211|Alphaproteobacteria,4BABX@82115|Rhizobiaceae	28211|Alphaproteobacteria	S	Bacterial protein of unknown function (DUF924)	-	-	-	-	-	-	-	-	-	-	-	-	DUF924
DYD3_k127_2105911_6	264462.Bd1745	4.621e-49	185.0	COG0583@1|root,COG0583@2|Bacteria,1QAQ1@1224|Proteobacteria,433RD@68525|delta/epsilon subdivisions,2MTGZ@213481|Bdellovibrionales,2WTIS@28221|Deltaproteobacteria	2|Bacteria	K	LysR substrate binding domain	-	-	-	-	-	-	-	-	-	-	-	-	HTH_1,LysR_substrate
DYD3_k127_2105911_3	1094715.CM001373_gene297	1.806e-65	235.0	COG3207@1|root,COG3207@2|Bacteria,1R4R2@1224|Proteobacteria,1RQMJ@1236|Gammaproteobacteria,1JCV6@118969|Legionellales	118969|Legionellales	Q	pyoverdine biosynthesis protein PvcA	-	-	-	-	-	-	-	-	-	-	-	-	DIT1_PvcA
DYD3_k127_2105911_5	1122164.JHWF01000043_gene1437	1.879e-50	187.0	COG2175@1|root,COG2175@2|Bacteria,1R69C@1224|Proteobacteria,1RQQN@1236|Gammaproteobacteria,1JGID@118969|Legionellales	118969|Legionellales	Q	Taurine catabolism dioxygenase TauD, TfdA family	-	-	-	-	-	-	-	-	-	-	-	-	TauD
DYD3_k127_2105911_0	1121324.CLIT_23c04850	9.745e-242	758.0	COG0488@1|root,COG0488@2|Bacteria,1TPW0@1239|Firmicutes,248ST@186801|Clostridia,25QU3@186804|Peptostreptococcaceae	186801|Clostridia	S	ABC transporter	ykpA	-	-	-	-	-	-	-	-	-	-	-	ABC_tran,ABC_tran_Xtn
DYD3_k127_2105911_8	1538295.JY96_21810	1.438e-37	144.0	COG3759@1|root,COG3759@2|Bacteria,1MZ4F@1224|Proteobacteria,2VUPP@28216|Betaproteobacteria,1KMDF@119065|unclassified Burkholderiales	28216|Betaproteobacteria	S	Protein of unknown function (DUF1304)	-	-	-	ko:K08987	-	-	-	-	ko00000	-	-	-	DUF1304
DYD3_k127_2105911_4	1237149.C900_04937	4.299e-60	214.0	COG0584@1|root,COG0584@2|Bacteria,4NGI1@976|Bacteroidetes,47MFN@768503|Cytophagia	976|Bacteroidetes	C	PFAM Glycerophosphoryl diester phosphodiesterase	glpQ	-	3.1.4.46	ko:K01126	ko00564,map00564	-	R01030,R01470	RC00017,RC00425	ko00000,ko00001,ko01000	-	-	-	GDPD,Phytase-like
DYD3_k127_2143106_0	794903.OPIT5_27280	2.12e-234	760.0	COG3696@1|root,COG3696@2|Bacteria,46USJ@74201|Verrucomicrobia,3K96P@414999|Opitutae	74201|Verrucomicrobia	P	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family	-	-	-	ko:K15726	-	-	-	-	ko00000,ko02000	2.A.6.1.2	-	-	ACR_tran
DYD3_k127_2143106_11	90813.JQMT01000001_gene1084	5.231e-71	244.0	COG2824@1|root,COG2824@2|Bacteria,1RGUU@1224|Proteobacteria,1S60W@1236|Gammaproteobacteria,462BF@72273|Thiotrichales	72273|Thiotrichales	P	PhnA Zinc-Ribbon	-	-	-	ko:K06193	ko01120,map01120	-	-	-	ko00000	-	-	-	PhnA,PhnA_Zn_Ribbon
DYD3_k127_2143106_1	264462.Bd3656	5.455e-158	508.0	COG0477@1|root,COG2814@2|Bacteria,1MVVW@1224|Proteobacteria,42YKU@68525|delta/epsilon subdivisions,2MTRE@213481|Bdellovibrionales,2WUEM@28221|Deltaproteobacteria	213481|Bdellovibrionales	EGP	Major Facilitator Superfamily	-	-	-	-	-	-	-	-	-	-	-	-	MFS_1
DYD3_k127_2143106_15	1123060.JONP01000029_gene3629	2.783e-59	212.0	COG1335@1|root,COG1335@2|Bacteria,1MWFQ@1224|Proteobacteria,2TUZG@28211|Alphaproteobacteria	28211|Alphaproteobacteria	Q	Amidases related to nicotinamidase	-	-	-	-	-	-	-	-	-	-	-	-	Isochorismatase
DYD3_k127_2143106_17	443143.GM18_1060	1.385e-45	171.0	COG2353@1|root,COG2353@2|Bacteria,1R9XD@1224|Proteobacteria,42T4I@68525|delta/epsilon subdivisions,2WPAC@28221|Deltaproteobacteria,43UU5@69541|Desulfuromonadales	28221|Deltaproteobacteria	S	Belongs to the UPF0312 family	-	-	-	-	-	-	-	-	-	-	-	-	YceI
DYD3_k127_2143106_6	1410620.SHLA_6c000650	1.349e-108	358.0	COG0656@1|root,COG0656@2|Bacteria,1MWFS@1224|Proteobacteria,2TT2Q@28211|Alphaproteobacteria,4BBW3@82115|Rhizobiaceae	28211|Alphaproteobacteria	S	Aldo keto reductases, related to diketogulonate reductase	dkgA	-	1.1.1.346	ko:K06221	-	-	R08878	RC00089	ko00000,ko01000	-	-	-	Aldo_ket_red
DYD3_k127_2143106_9	1444711.CCJF01000004_gene2135	9.365e-78	263.0	COG1853@1|root,COG1853@2|Bacteria	2|Bacteria	S	FMN binding	flr	-	-	-	-	-	-	-	-	-	-	-	Flavin_Reduct
DYD3_k127_2143106_21	862908.BMS_0685	6.799e-42	166.0	COG3021@1|root,COG3021@2|Bacteria,1MVPP@1224|Proteobacteria	1224|Proteobacteria	S	Endonuclease Exonuclease Phosphatase	-	-	-	-	-	-	-	-	-	-	-	-	Exo_endo_phos
DYD3_k127_2143106_19	1184267.A11Q_1010	6.837e-44	173.0	COG2374@1|root,COG2374@2|Bacteria,1N5TK@1224|Proteobacteria,437GY@68525|delta/epsilon subdivisions,2MT6J@213481|Bdellovibrionales,2WSJQ@28221|Deltaproteobacteria	213481|Bdellovibrionales	S	Endonuclease/Exonuclease/phosphatase family	-	-	-	-	-	-	-	-	-	-	-	-	Exo_endo_phos
DYD3_k127_2143106_2	1166018.FAES_0344	3.726e-151	485.0	COG0667@1|root,COG0667@2|Bacteria,4NEDK@976|Bacteroidetes,47KXI@768503|Cytophagia	976|Bacteroidetes	C	PFAM aldo keto reductase	-	-	-	-	-	-	-	-	-	-	-	-	Aldo_ket_red
DYD3_k127_2143106_22	362418.IW19_15230	7.801e-37	144.0	COG2764@1|root,COG2764@2|Bacteria,4NQD7@976|Bacteroidetes,1I2AQ@117743|Flavobacteriia,2NW94@237|Flavobacterium	976|Bacteroidetes	S	Glyoxalase	-	-	-	ko:K04750	-	-	-	-	ko00000	-	-	-	3-dmu-9_3-mt
DYD3_k127_2143106_27	886293.Sinac_7080	6.653e-27	121.0	COG3832@1|root,COG3832@2|Bacteria,2J0ET@203682|Planctomycetes	203682|Planctomycetes	S	Activator of Hsp90 ATPase homolog 1-like protein	-	-	-	-	-	-	-	-	-	-	-	-	AHSA1
DYD3_k127_2143106_32	666686.B1NLA3E_12160	3.665e-18	94.0	COG3832@1|root,COG3832@2|Bacteria	2|Bacteria	J	glyoxalase III activity	-	-	-	-	-	-	-	-	-	-	-	-	AHSA1
DYD3_k127_2143106_3	420324.KI912039_gene2235	2.036e-134	436.0	COG2070@1|root,COG2070@2|Bacteria,1MU2F@1224|Proteobacteria,2TUT7@28211|Alphaproteobacteria,1JSXA@119045|Methylobacteriaceae	28211|Alphaproteobacteria	S	PFAM 2-nitropropane dioxygenase NPD	MA20_36480	-	1.13.12.16	ko:K00459	ko00910,map00910	-	R00025	RC02541,RC02759	ko00000,ko00001,ko01000	-	-	-	NMO
DYD3_k127_2143106_20	862908.BMS_0685	1.859e-43	169.0	COG3021@1|root,COG3021@2|Bacteria,1MVPP@1224|Proteobacteria	1224|Proteobacteria	S	Endonuclease Exonuclease Phosphatase	-	-	-	-	-	-	-	-	-	-	-	-	Exo_endo_phos
DYD3_k127_2143106_29	1041147.AUFB01000012_gene1780	1.003e-22	106.0	COG0671@1|root,COG0671@2|Bacteria,1R91F@1224|Proteobacteria,2U31R@28211|Alphaproteobacteria,4BCD3@82115|Rhizobiaceae	28211|Alphaproteobacteria	I	Acid phosphatase homologues	-	-	3.1.3.2	ko:K09474	ko00740,ko01100,ko02020,map00740,map01100,map02020	-	R00548	RC00017	ko00000,ko00001,ko01000	-	-	-	PAP2
DYD3_k127_2143106_30	1353529.M899_1873	1.724e-22	103.0	COG0727@1|root,COG0727@2|Bacteria,1N3UP@1224|Proteobacteria,42U10@68525|delta/epsilon subdivisions,2WQ8S@28221|Deltaproteobacteria	28221|Deltaproteobacteria	S	Putative zinc- or iron-chelating domain	-	-	-	-	-	-	-	-	-	-	-	-	CxxCxxCC
DYD3_k127_2143106_8	1353529.M899_1161	1.642e-81	280.0	COG3384@1|root,COG3384@2|Bacteria,1MXJZ@1224|Proteobacteria,42Q1N@68525|delta/epsilon subdivisions,2MSN0@213481|Bdellovibrionales,2WK3A@28221|Deltaproteobacteria	213481|Bdellovibrionales	S	PFAM Extradiol ring-cleavage dioxygenase class III protein subunit B	ygiD	-	-	ko:K15777	ko00965,map00965	-	R08836	RC00387	ko00000,ko00001,ko01000	-	-	-	LigB
DYD3_k127_2143106_23	1500301.JQMF01000002_gene706	1.048e-36	143.0	COG3832@1|root,COG3832@2|Bacteria,1RJ7U@1224|Proteobacteria,2U9W0@28211|Alphaproteobacteria,4BE9Z@82115|Rhizobiaceae	28211|Alphaproteobacteria	S	Activator of Hsp90 ATPase homolog 1-like protein	-	-	-	-	-	-	-	-	-	-	-	-	AHSA1
DYD3_k127_2143106_26	1201290.M902_1903	2.971e-28	131.0	COG1502@1|root,COG1502@2|Bacteria	2|Bacteria	I	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol	nuc	-	3.1.4.4	ko:K06131,ko:K17717	ko00564,ko00565,ko01100,ko01110,map00564,map00565,map01100,map01110	-	R01310,R02051,R07385,R07390	RC00017,RC00425	ko00000,ko00001,ko01000	-	-	-	PLDc_2
DYD3_k127_2143106_7	264462.Bd2068	7.534e-108	355.0	COG0501@1|root,COG0501@2|Bacteria,1MUNA@1224|Proteobacteria,43BJA@68525|delta/epsilon subdivisions,2WME6@28221|Deltaproteobacteria	28221|Deltaproteobacteria	O	Peptidase family M48	-	-	-	-	-	-	-	-	-	-	-	-	Peptidase_M48
DYD3_k127_2143106_24	264462.Bd2883	5.929e-33	133.0	COG0517@1|root,COG0517@2|Bacteria,1QQRM@1224|Proteobacteria,42TVT@68525|delta/epsilon subdivisions,2MUHU@213481|Bdellovibrionales,2X2EN@28221|Deltaproteobacteria	213481|Bdellovibrionales	S	Domain in cystathionine beta-synthase and other proteins.	-	-	-	-	-	-	-	-	-	-	-	-	CBS
DYD3_k127_2143106_18	1353529.M899_3302	3.667e-45	168.0	2AINR@1|root,31957@2|Bacteria,1NZ0E@1224|Proteobacteria,430UB@68525|delta/epsilon subdivisions,2MT6P@213481|Bdellovibrionales,2WVME@28221|Deltaproteobacteria	213481|Bdellovibrionales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_2143106_25	1353529.M899_0434	1.614e-31	130.0	COG1547@1|root,COG1547@2|Bacteria,1NM9F@1224|Proteobacteria,432N5@68525|delta/epsilon subdivisions,2WXNF@28221|Deltaproteobacteria	28221|Deltaproteobacteria	S	Domain of unknown function (DUF309)	-	-	-	ko:K09763	-	-	-	-	ko00000	-	-	-	DUF309
DYD3_k127_2143106_13	1163407.UU7_11864	1.701e-69	261.0	COG0265@1|root,COG0265@2|Bacteria	2|Bacteria	O	serine-type endopeptidase activity	-	-	-	ko:K04772	-	-	-	-	ko00000,ko01000,ko01002	-	-	-	PDZ_2,Trypsin_2
DYD3_k127_2143106_16	1184267.A11Q_1869	2.962e-59	211.0	COG1272@1|root,COG1272@2|Bacteria,1PGRH@1224|Proteobacteria,42WQ9@68525|delta/epsilon subdivisions,2MU1C@213481|Bdellovibrionales,2WS3I@28221|Deltaproteobacteria	213481|Bdellovibrionales	S	Haemolysin-III related	-	-	-	ko:K11068	-	-	-	-	ko00000,ko02042	-	-	-	HlyIII
DYD3_k127_2143106_4	399742.Ent638_3918	2.807e-118	387.0	COG0583@1|root,COG0583@2|Bacteria,1MV06@1224|Proteobacteria,1RPI0@1236|Gammaproteobacteria,3X0ZR@547|Enterobacter	1236|Gammaproteobacteria	K	Transcriptional regulator	yhjC	GO:0003674,GO:0003676,GO:0003677,GO:0003700,GO:0005488,GO:0006139,GO:0006351,GO:0006355,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009889,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0016070,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0031323,GO:0031326,GO:0032774,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0043565,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0046483,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0071704,GO:0080090,GO:0090304,GO:0097159,GO:0097659,GO:0140110,GO:1901360,GO:1901362,GO:1901363,GO:1901576,GO:1903506,GO:2000112,GO:2001141	-	-	-	-	-	-	-	-	-	-	HTH_1,LysR_substrate
DYD3_k127_2143106_5	1458275.AZ34_07645	3.283e-111	365.0	COG1028@1|root,COG1028@2|Bacteria,1MU73@1224|Proteobacteria,2VKMX@28216|Betaproteobacteria,4AATA@80864|Comamonadaceae	28216|Betaproteobacteria	IQ	Short-chain dehydrogenase reductase sdr	-	-	-	-	-	-	-	-	-	-	-	-	adh_short_C2
DYD3_k127_2143106_12	264462.Bd2836	2.656e-70	241.0	COG2353@1|root,COG2353@2|Bacteria,1R9XD@1224|Proteobacteria,42T4I@68525|delta/epsilon subdivisions,2MT3E@213481|Bdellovibrionales,2WPAC@28221|Deltaproteobacteria	213481|Bdellovibrionales	S	Belongs to the UPF0312 family	-	-	-	-	-	-	-	-	-	-	-	-	YceI
DYD3_k127_2143106_31	7220.FBpp0132475	3.093e-18	89.0	KOG1971@1|root,KOG1971@2759|Eukaryota,38DIW@33154|Opisthokonta,3BCUS@33208|Metazoa,3CS3C@33213|Bilateria,41TBU@6656|Arthropoda,3SHZJ@50557|Insecta,44X5M@7147|Diptera,45W5C@7214|Drosophilidae	33208|Metazoa	O	Oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors. It is involved in the biological process described with oxidation-reduction process	PLOD1	GO:0000003,GO:0000902,GO:0000904,GO:0001666,GO:0001701,GO:0001885,GO:0001886,GO:0002009,GO:0002064,GO:0003006,GO:0003008,GO:0003013,GO:0003018,GO:0003158,GO:0003382,GO:0003674,GO:0003824,GO:0003980,GO:0005488,GO:0005506,GO:0005515,GO:0005575,GO:0005576,GO:0005615,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005789,GO:0005791,GO:0005794,GO:0005802,GO:0006011,GO:0006082,GO:0006139,GO:0006464,GO:0006486,GO:0006493,GO:0006520,GO:0006575,GO:0006725,GO:0006793,GO:0006807,GO:0006950,GO:0007275,GO:0007276,GO:0007281,GO:0007292,GO:0007295,GO:0007399,GO:0008015,GO:0008104,GO:0008150,GO:0008152,GO:0008194,GO:0008198,GO:0008378,GO:0008475,GO:0008544,GO:0008652,GO:0009058,GO:0009059,GO:0009066,GO:0009067,GO:0009100,GO:0009101,GO:0009225,GO:0009628,GO:0009653,GO:0009719,GO:0009725,GO:0009790,GO:0009792,GO:0009887,GO:0009888,GO:0009987,GO:0010033,GO:0012505,GO:0016020,GO:0016043,GO:0016053,GO:0016491,GO:0016705,GO:0016706,GO:0016740,GO:0016757,GO:0016758,GO:0017185,GO:0018126,GO:0018193,GO:0018205,GO:0019538,GO:0019752,GO:0019842,GO:0019953,GO:0021915,GO:0022412,GO:0022414,GO:0022607,GO:0030154,GO:0030198,GO:0030199,GO:0030246,GO:0030323,GO:0030324,GO:0030855,GO:0030867,GO:0031012,GO:0031090,GO:0031406,GO:0031418,GO:0031984,GO:0032501,GO:0032502,GO:0032504,GO:0032870,GO:0032963,GO:0032964,GO:0032989,GO:0032991,GO:0033036,GO:0033218,GO:0033823,GO:0034641,GO:0034645,GO:0035150,GO:0035250,GO:0035251,GO:0035295,GO:0035296,GO:0036094,GO:0036211,GO:0036293,GO:0040007,GO:0042175,GO:0042221,GO:0042277,GO:0042311,GO:0042398,GO:0042802,GO:0042803,GO:0043009,GO:0043062,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0043177,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0043413,GO:0043436,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044281,GO:0044283,GO:0044421,GO:0044422,GO:0044424,GO:0044425,GO:0044431,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0044703,GO:0045446,GO:0046394,GO:0046483,GO:0046527,GO:0046872,GO:0046914,GO:0046946,GO:0046947,GO:0046983,GO:0048029,GO:0048037,GO:0048468,GO:0048471,GO:0048477,GO:0048513,GO:0048589,GO:0048609,GO:0048729,GO:0048730,GO:0048731,GO:0048856,GO:0048869,GO:0050211,GO:0050662,GO:0050880,GO:0050896,GO:0051179,GO:0051213,GO:0051704,GO:0051716,GO:0055086,GO:0055114,GO:0060425,GO:0060429,GO:0060541,GO:0062023,GO:0065007,GO:0065008,GO:0070085,GO:0070482,GO:0070815,GO:0070831,GO:0070887,GO:0071310,GO:0071495,GO:0071704,GO:0071711,GO:0071840,GO:0090066,GO:0097359,GO:0097435,GO:0097746,GO:0097755,GO:0098588,GO:0098791,GO:0098827,GO:0140096,GO:1901135,GO:1901137,GO:1901360,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607,GO:1902494	1.14.11.4,2.4.1.50,2.4.1.66	ko:K00473,ko:K13645,ko:K13646,ko:K13647,ko:K15174	ko00310,ko00514,ko04011,map00310,map00514,map04011	-	R03376,R03380,R04491	RC00005,RC00049,RC00397,RC00709	ko00000,ko00001,ko01000,ko01003,ko03021,ko04147	-	-	-	2OG-FeII_Oxy
DYD3_k127_2197529_2	862908.BMS_0938	3.572e-32	130.0	2DDU5@1|root,2ZJAM@2|Bacteria,1PAH7@1224|Proteobacteria,432EN@68525|delta/epsilon subdivisions,2MUJ4@213481|Bdellovibrionales,2WY5X@28221|Deltaproteobacteria	213481|Bdellovibrionales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	Stanniocalcin
DYD3_k127_2197529_1	204773.HEAR1081	2.974e-82	277.0	COG3548@1|root,COG3548@2|Bacteria,1R9WQ@1224|Proteobacteria,2VQBM@28216|Betaproteobacteria,474I0@75682|Oxalobacteraceae	28216|Betaproteobacteria	S	Protein of unknown function (DUF1211)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1211
DYD3_k127_2197529_0	1121948.AUAC01000002_gene1052	1.376e-114	389.0	COG2176@1|root,COG2176@2|Bacteria,1QUVW@1224|Proteobacteria,2TSZS@28211|Alphaproteobacteria,43ZJG@69657|Hyphomonadaceae	28211|Alphaproteobacteria	L	VRR_NUC	polC	-	2.7.7.7	ko:K02342	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	M00260	R00375,R00376,R00377,R00378	RC02795	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	-	-	-	RNase_T,VRR_NUC
DYD3_k127_2199580_10	1201288.M900_0936	1.089e-40	160.0	COG1846@1|root,COG1846@2|Bacteria,1NXZJ@1224|Proteobacteria,430BH@68525|delta/epsilon subdivisions,2MU6M@213481|Bdellovibrionales,2WVRG@28221|Deltaproteobacteria	213481|Bdellovibrionales	K	Domain of unknown function (DUF4423)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4423
DYD3_k127_2199580_2	351016.RAZWK3B_09896	6.105e-96	325.0	COG3473@1|root,COG3473@2|Bacteria,1RKZQ@1224|Proteobacteria,2U13U@28211|Alphaproteobacteria	28211|Alphaproteobacteria	Q	Maleate cis-trans isomerase	-	-	5.2.1.1	ko:K01799	ko00650,ko00760,ko01120,map00650,map00760,map01120	M00622	R01087	RC00448	ko00000,ko00001,ko00002,ko01000	-	-	-	-
DYD3_k127_2199580_6	1448139.AI20_18365	1.652e-62	226.0	COG0583@1|root,COG0583@2|Bacteria,1MW16@1224|Proteobacteria,1RPNX@1236|Gammaproteobacteria,1Y5QS@135624|Aeromonadales	135624|Aeromonadales	K	LysR substrate binding domain	-	-	-	-	-	-	-	-	-	-	-	-	HTH_1,LysR_substrate
DYD3_k127_2199580_1	869213.JCM21142_3996	1.717e-207	657.0	COG0367@1|root,COG0367@2|Bacteria,4NFQ3@976|Bacteroidetes,47JSF@768503|Cytophagia	976|Bacteroidetes	E	Asparagine synthase	asnB	-	6.3.5.4	ko:K01953	ko00250,ko01100,ko01110,map00250,map01100,map01110	-	R00578	RC00010	ko00000,ko00001,ko01000,ko01002	-	-	-	Asn_synthase,GATase_7
DYD3_k127_2199580_3	1201288.M900_1987	2.482e-95	321.0	COG2866@1|root,COG2866@2|Bacteria,1NW73@1224|Proteobacteria,42QG0@68525|delta/epsilon subdivisions,2MSW3@213481|Bdellovibrionales,2WJE5@28221|Deltaproteobacteria	213481|Bdellovibrionales	E	Protein of unknown function (DUF2817)	-	-	-	-	-	-	-	-	-	-	-	-	Peptidase_M14
DYD3_k127_2199580_7	1298593.TOL_1209	2.097e-62	224.0	COG0846@1|root,COG0846@2|Bacteria,1MUK1@1224|Proteobacteria,1RMX5@1236|Gammaproteobacteria,1XIDW@135619|Oceanospirillales	135619|Oceanospirillales	K	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form	cobB	-	-	ko:K12410	-	-	-	-	ko00000,ko01000	-	-	-	SIR2
DYD3_k127_2199580_8	264462.Bd1725	1.048e-59	218.0	COG1562@1|root,COG1562@2|Bacteria,1MX4W@1224|Proteobacteria	1224|Proteobacteria	I	phytoene synthase	crtB	GO:0003674,GO:0003824,GO:0006629,GO:0006720,GO:0006721,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0009058,GO:0009987,GO:0016108,GO:0016109,GO:0016114,GO:0016116,GO:0016117,GO:0016740,GO:0016765,GO:0042440,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0046148,GO:0071704,GO:1901576	2.5.1.32,2.5.1.99	ko:K02291	ko00906,ko01062,ko01100,ko01110,map00906,map01062,map01100,map01110	M00097	R02065,R04218,R07270,R10177	RC00362,RC01101,RC02869	ko00000,ko00001,ko00002,ko01000,ko01006	-	-	-	SQS_PSY
DYD3_k127_2199580_0	264462.Bd1724	7.987e-227	711.0	COG1233@1|root,COG1233@2|Bacteria,1MV2R@1224|Proteobacteria,42NXM@68525|delta/epsilon subdivisions,2MUHZ@213481|Bdellovibrionales,2WJ2I@28221|Deltaproteobacteria	213481|Bdellovibrionales	Q	PFAM FAD dependent oxidoreductase	-	-	1.3.99.26,1.3.99.28,1.3.99.29,1.3.99.31,5.2.1.13	ko:K09835,ko:K10027	ko00906,ko01100,ko01110,map00906,map01100,map01110	M00097	R04787,R04798,R04800,R07512,R09691,R09692	RC01214,RC01960,RC02088,RC02605	ko00000,ko00001,ko00002,ko01000	-	-	-	Amino_oxidase
DYD3_k127_2199580_9	502025.Hoch_2210	9.989e-42	167.0	COG0142@1|root,COG0142@2|Bacteria,1NXYK@1224|Proteobacteria,430UK@68525|delta/epsilon subdivisions,2WVY1@28221|Deltaproteobacteria	28221|Deltaproteobacteria	H	Belongs to the FPP GGPP synthase family	-	-	-	-	-	-	-	-	-	-	-	-	polyprenyl_synt
DYD3_k127_2199580_5	1121028.ARQE01000003_gene590	3.491e-66	235.0	COG1635@1|root,COG1635@2|Bacteria,1QV1K@1224|Proteobacteria,2TWTU@28211|Alphaproteobacteria,2PKB1@255475|Aurantimonadaceae	28211|Alphaproteobacteria	H	Lycopene cyclase protein	-	-	5.5.1.19	ko:K06443	ko00906,ko01100,ko01110,map00906,map01100,map01110	M00097	R03824,R04801,R05341,R06962,R07856	RC01004,RC01964	ko00000,ko00001,ko00002,ko01000	-	-	-	Lycopene_cycl
DYD3_k127_2222651_0	264462.Bd2726	3.156e-07	64.0	COG1566@1|root,COG1566@2|Bacteria,1NX9X@1224|Proteobacteria,430YD@68525|delta/epsilon subdivisions,2MU4I@213481|Bdellovibrionales,2WVVE@28221|Deltaproteobacteria	213481|Bdellovibrionales	V	PFAM secretion protein HlyD family protein	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_22350_0	745411.B3C1_11779	6.978e-20	104.0	COG3083@1|root,COG3083@2|Bacteria,1MX6X@1224|Proteobacteria,1RPAU@1236|Gammaproteobacteria	1236|Gammaproteobacteria	S	Hydrolase of alkaline phosphatase superfamily	-	-	-	-	-	-	-	-	-	-	-	-	Sulfatase
DYD3_k127_2271069_3	1120963.KB894504_gene1882	1.492e-18	101.0	COG1664@1|root,COG2931@1|root,COG5571@1|root,COG1664@2|Bacteria,COG2931@2|Bacteria,COG5571@2|Bacteria,1QUZJ@1224|Proteobacteria,1T318@1236|Gammaproteobacteria,2Q1VF@267888|Pseudoalteromonadaceae	1236|Gammaproteobacteria	MN	calcium- and calmodulin-responsive adenylate cyclase activity	mshQ	-	-	ko:K12287	-	-	-	-	ko00000,ko02044	-	-	-	Bactofilin,H_lectin,Laminin_G_3,PA14
DYD3_k127_2271069_4	1121286.AUMT01000008_gene542	1.382e-08	68.0	COG5492@1|root,COG5492@2|Bacteria,4PPAJ@976|Bacteroidetes,1I5P1@117743|Flavobacteriia	976|Bacteroidetes	N	Concanavalin A-like lectin/glucanases superfamily	-	-	-	-	-	-	-	-	-	-	-	-	Laminin_G_3
DYD3_k127_2271069_1	1469607.KK073768_gene2434	1.127e-40	160.0	COG4638@1|root,COG4638@2|Bacteria,1G2UQ@1117|Cyanobacteria,1HM5N@1161|Nostocales	1117|Cyanobacteria	P	PFAM Rieske 2Fe-2S domain	hcaE	-	-	ko:K19982	ko00404,ko01130,map00404,map01130	M00790	R11107	RC01333	ko00000,ko00001,ko00002,ko01000	-	-	-	PaO,Rieske
DYD3_k127_228133_6	1353529.M899_1298	2.45e-15	91.0	COG1196@1|root,COG1196@2|Bacteria	2|Bacteria	D	nuclear chromosome segregation	-	-	-	-	-	-	-	-	-	-	-	-	Cu_amine_oxidN1,DUF1542,DUF4139,DUF4140,FIVAR,GA,Gram_pos_anchor,Rib,YSIRK_signal
DYD3_k127_228133_0	862908.BMS_0019	0.0	1233.0	COG0178@1|root,COG0178@2|Bacteria,1MW0W@1224|Proteobacteria,42M4I@68525|delta/epsilon subdivisions,2MSS4@213481|Bdellovibrionales,2WJHM@28221|Deltaproteobacteria	213481|Bdellovibrionales	L	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate	uvrA	-	-	ko:K03701	ko03420,map03420	-	-	-	ko00000,ko00001,ko03400	-	-	-	ABC_tran
DYD3_k127_228133_4	1201288.M900_0090	3.68e-62	226.0	COG1995@1|root,COG1995@2|Bacteria,1MX5W@1224|Proteobacteria,42NJJ@68525|delta/epsilon subdivisions,2MT3X@213481|Bdellovibrionales,2WJGI@28221|Deltaproteobacteria	213481|Bdellovibrionales	H	Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)	pdxA	-	1.1.1.262,1.1.1.408,1.1.1.409	ko:K00097,ko:K22024	ko00750,ko01100,map00750,map01100	M00124	R05681,R05837,R07406	RC00089,RC00675,RC01475	ko00000,ko00001,ko00002,ko01000	-	-	-	PdxA
DYD3_k127_228133_3	1201288.M900_0091	5.681e-77	268.0	COG0760@1|root,COG0760@2|Bacteria	2|Bacteria	O	peptidyl-prolyl cis-trans isomerase activity	surA	GO:0000413,GO:0003674,GO:0003755,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0006457,GO:0006458,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016043,GO:0016853,GO:0016859,GO:0018193,GO:0018208,GO:0019538,GO:0022607,GO:0030288,GO:0030313,GO:0031647,GO:0031975,GO:0033218,GO:0036211,GO:0042277,GO:0042597,GO:0043163,GO:0043165,GO:0043170,GO:0043412,GO:0044085,GO:0044091,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044464,GO:0044764,GO:0045229,GO:0050821,GO:0051082,GO:0051084,GO:0051085,GO:0051704,GO:0060274,GO:0061024,GO:0061077,GO:0065007,GO:0065008,GO:0071704,GO:0071709,GO:0071840,GO:0140096,GO:1901564	5.2.1.8	ko:K03769,ko:K03771	-	-	-	-	ko00000,ko01000,ko03110	-	-	-	Rotamase,Rotamase_3,SurA_N
DYD3_k127_228133_2	862908.BMS_0022	3.916e-81	278.0	COG0760@1|root,COG0760@2|Bacteria,1MZDK@1224|Proteobacteria,42RP3@68525|delta/epsilon subdivisions,2MTUM@213481|Bdellovibrionales,2WNPA@28221|Deltaproteobacteria	213481|Bdellovibrionales	M	peptidyl-prolyl isomerase	-	-	5.2.1.8	ko:K03769,ko:K03770	-	-	-	-	ko00000,ko01000,ko03110	-	-	-	Rotamase,Rotamase_2,Rotamase_3,SurA_N_3
DYD3_k127_228133_1	862908.BMS_0023	0.0	1114.0	COG1197@1|root,COG1197@2|Bacteria,1MUXG@1224|Proteobacteria,42N8X@68525|delta/epsilon subdivisions,2MSM0@213481|Bdellovibrionales,2WIVR@28221|Deltaproteobacteria	213481|Bdellovibrionales	L	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site	mfd	-	-	ko:K03723	ko03420,map03420	-	-	-	ko00000,ko00001,ko01000,ko03400	-	-	-	CarD_CdnL_TRCF,DEAD,Helicase_C,TRCF
DYD3_k127_228133_5	862908.BMS_0024	7.099e-41	156.0	COG0838@1|root,COG0838@2|Bacteria,1PPP3@1224|Proteobacteria,42VF4@68525|delta/epsilon subdivisions,2MUQA@213481|Bdellovibrionales,2WRIV@28221|Deltaproteobacteria	213481|Bdellovibrionales	C	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain	nuoA	-	1.6.5.3	ko:K00330	ko00190,ko01100,map00190,map01100	M00144	R11945	RC00061	ko00000,ko00001,ko00002,ko01000	3.D.1	-	-	Oxidored_q4
DYD3_k127_2368678_12	862908.BMS_3053	7.682e-23	113.0	COG0737@1|root,COG0737@2|Bacteria	2|Bacteria	F	nucleotide catabolic process	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_2368678_5	1353529.M899_3179	4.929e-124	409.0	COG1104@1|root,COG1104@2|Bacteria,1MU1C@1224|Proteobacteria,42M5V@68525|delta/epsilon subdivisions,2MSY6@213481|Bdellovibrionales,2WIR6@28221|Deltaproteobacteria	213481|Bdellovibrionales	E	Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine	-	-	2.8.1.7	ko:K04487	ko00730,ko01100,ko04122,map00730,map01100,map04122	-	R07460,R11528,R11529	RC01789,RC02313	ko00000,ko00001,ko01000,ko02048,ko03016,ko03029	-	-	-	Aminotran_5
DYD3_k127_2368678_2	1353529.M899_3178	8.356e-163	520.0	COG0379@1|root,COG0379@2|Bacteria,1MWQU@1224|Proteobacteria,42N99@68525|delta/epsilon subdivisions,2MT2T@213481|Bdellovibrionales,2WJY8@28221|Deltaproteobacteria	213481|Bdellovibrionales	H	Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate	nadA	GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006520,GO:0006531,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008987,GO:0009058,GO:0009066,GO:0009108,GO:0009117,GO:0009165,GO:0009435,GO:0009987,GO:0016053,GO:0017144,GO:0018130,GO:0019355,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019637,GO:0019674,GO:0019752,GO:0019805,GO:0034627,GO:0034628,GO:0034641,GO:0034654,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0046496,GO:0046874,GO:0048037,GO:0051186,GO:0051188,GO:0051536,GO:0051539,GO:0051540,GO:0055086,GO:0071704,GO:0072524,GO:0072525,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605	2.5.1.72	ko:K03517	ko00760,ko01100,map00760,map01100	M00115	R04292	RC01119	ko00000,ko00001,ko00002,ko01000	-	-	-	NadA
DYD3_k127_2368678_4	862908.BMS_3048	2.656e-124	404.0	COG1192@1|root,COG1192@2|Bacteria,1MV43@1224|Proteobacteria,42MTF@68525|delta/epsilon subdivisions,2WJ6X@28221|Deltaproteobacteria	28221|Deltaproteobacteria	D	PFAM Cobyrinic acid ac-diamide synthase	-	-	-	ko:K03496	-	-	-	-	ko00000,ko03036,ko04812	-	-	-	AAA_31
DYD3_k127_2368678_7	1353529.M899_3175	6.531e-86	292.0	COG1475@1|root,COG1475@2|Bacteria,1N87M@1224|Proteobacteria	1224|Proteobacteria	K	ParB-like nuclease domain	-	-	-	ko:K03497	-	-	-	-	ko00000,ko03000,ko03036,ko04812	-	-	-	ParBc
DYD3_k127_2368678_1	862908.BMS_3045	1.53e-211	663.0	COG0334@1|root,COG0334@2|Bacteria,1MUMF@1224|Proteobacteria,42NM8@68525|delta/epsilon subdivisions,2MSNU@213481|Bdellovibrionales,2WIWB@28221|Deltaproteobacteria	213481|Bdellovibrionales	C	Belongs to the Glu Leu Phe Val dehydrogenases family	-	-	1.4.1.3	ko:K00261	ko00220,ko00250,ko00471,ko00910,ko01100,ko01200,ko04217,ko04964,map00220,map00250,map00471,map00910,map01100,map01200,map04217,map04964	M00740	R00243,R00248	RC00006,RC02799	ko00000,ko00001,ko00002,ko01000,ko04147	-	-	-	ELFV_dehydrog,ELFV_dehydrog_N
DYD3_k127_2368678_8	1201290.M902_2251	1.308e-48	186.0	COG0671@1|root,COG0671@2|Bacteria,1NCIZ@1224|Proteobacteria,43A9X@68525|delta/epsilon subdivisions,2MU5Y@213481|Bdellovibrionales,2X9SX@28221|Deltaproteobacteria	213481|Bdellovibrionales	I	PAP2 superfamily	-	-	-	-	-	-	-	-	-	-	-	-	PAP2
DYD3_k127_2368678_11	1201290.M902_1845	5.692e-23	105.0	COG0606@1|root,COG0606@2|Bacteria	2|Bacteria	O	chelatase, subunit chli	comM	-	-	ko:K07391	-	-	-	-	ko00000	-	-	-	ChlI,Mg_chelatase,Mg_chelatase_C
DYD3_k127_2368678_13	598467.BrE312_3608	5.947e-14	74.0	2C5EY@1|root,32YQJ@2|Bacteria,1N8K7@1224|Proteobacteria,1SDU6@1236|Gammaproteobacteria	1236|Gammaproteobacteria	S	Domain of unknown function (DUF4160)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4160
DYD3_k127_2368678_6	862908.BMS_3041	1.973e-120	394.0	COG0205@1|root,COG0205@2|Bacteria,1MVN3@1224|Proteobacteria,42Q5V@68525|delta/epsilon subdivisions,2MSNY@213481|Bdellovibrionales,2WJA1@28221|Deltaproteobacteria	213481|Bdellovibrionales	F	Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis	pfkA	-	2.7.1.11	ko:K00850	ko00010,ko00030,ko00051,ko00052,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko03018,ko04152,ko05230,map00010,map00030,map00051,map00052,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map03018,map04152,map05230	M00001,M00345	R00756,R03236,R03237,R03238,R03239,R04779	RC00002,RC00017	ko00000,ko00001,ko00002,ko01000,ko01009,ko03019	-	-	-	PFK
DYD3_k127_2368678_0	1353529.M899_3155	3.859e-212	670.0	COG0696@1|root,COG0696@2|Bacteria,1MUQ1@1224|Proteobacteria,42N6C@68525|delta/epsilon subdivisions,2WJ66@28221|Deltaproteobacteria	28221|Deltaproteobacteria	G	Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate	gpmI	-	5.4.2.12	ko:K15633	ko00010,ko00260,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00260,map00680,map01100,map01110,map01120,map01130,map01200,map01230	M00001,M00002,M00003	R01518	RC00536	ko00000,ko00001,ko00002,ko01000	-	-	-	Metalloenzyme,Phosphodiest,iPGM_N
DYD3_k127_2368678_10	1353529.M899_1336	4.613e-41	156.0	COG1576@1|root,COG1576@2|Bacteria,1N7WB@1224|Proteobacteria,42V41@68525|delta/epsilon subdivisions,2MTG3@213481|Bdellovibrionales,2X6IT@28221|Deltaproteobacteria	213481|Bdellovibrionales	J	Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA	rlmH	-	2.1.1.177	ko:K00783	-	-	-	-	ko00000,ko01000,ko03009	-	-	-	SPOUT_MTase
DYD3_k127_2368678_9	1201290.M902_1916	1.236e-41	158.0	COG0799@1|root,COG0799@2|Bacteria,1MZEF@1224|Proteobacteria,42VN5@68525|delta/epsilon subdivisions,2MTFD@213481|Bdellovibrionales,2WRGG@28221|Deltaproteobacteria	213481|Bdellovibrionales	J	Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation	rsfS	-	-	ko:K09710	-	-	-	-	ko00000,ko03009	-	-	-	RsfS
DYD3_k127_2368678_3	1201288.M900_0408	5.194e-142	459.0	COG0536@1|root,COG0536@2|Bacteria,1MUGZ@1224|Proteobacteria,42M40@68525|delta/epsilon subdivisions,2MSMS@213481|Bdellovibrionales,2WIM4@28221|Deltaproteobacteria	213481|Bdellovibrionales	S	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control	obg	-	-	ko:K03979	-	-	-	-	ko00000,ko01000,ko03009	-	-	-	GTP1_OBG,MMR_HSR1
DYD3_k127_2417742_10	1122621.ATZA01000032_gene3022	1.881e-35	138.0	COG1765@1|root,COG1765@2|Bacteria,4NQ66@976|Bacteroidetes,1ISTX@117747|Sphingobacteriia	976|Bacteroidetes	O	PFAM OsmC-like protein	osmC	-	-	-	-	-	-	-	-	-	-	-	OsmC
DYD3_k127_2417742_6	1201290.M902_3058	4.189e-50	198.0	COG1404@1|root,COG1404@2|Bacteria,1RCVT@1224|Proteobacteria	1224|Proteobacteria	O	Subtilase family	-	-	-	-	-	-	-	-	-	-	-	-	Peptidase_S8
DYD3_k127_2417742_8	471854.Dfer_2422	6.871e-45	169.0	COG2353@1|root,COG2353@2|Bacteria,4NMWH@976|Bacteroidetes,47PZ0@768503|Cytophagia	976|Bacteroidetes	S	Belongs to the UPF0312 family	-	-	-	-	-	-	-	-	-	-	-	-	YceI
DYD3_k127_2417742_7	1230343.CANP01000008_gene844	7.959e-47	179.0	COG0583@1|root,COG0583@2|Bacteria,1MZTA@1224|Proteobacteria,1SYCQ@1236|Gammaproteobacteria,1JE50@118969|Legionellales	118969|Legionellales	K	Bacterial regulatory helix-turn-helix protein, lysR family	-	-	-	-	-	-	-	-	-	-	-	-	HTH_1,LysR_substrate
DYD3_k127_2417742_2	1237149.C900_00597	2.941e-141	483.0	COG0823@1|root,COG0823@2|Bacteria,4NGPR@976|Bacteroidetes,47MQP@768503|Cytophagia	976|Bacteroidetes	U	Involved in the tonB-independent uptake of proteins	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_2417742_12	1201288.M900_1777	2.644e-11	75.0	COG4122@1|root,COG4122@2|Bacteria	2|Bacteria	E	O-methyltransferase activity	-	-	-	-	-	-	-	-	-	-	-	-	Methyltransf_21,SAM_MT
DYD3_k127_2417742_4	378806.STAUR_1355	7.51e-73	260.0	COG2966@1|root,COG3610@1|root,COG2966@2|Bacteria,COG3610@2|Bacteria,1RAQ0@1224|Proteobacteria,42PCB@68525|delta/epsilon subdivisions,2X357@28221|Deltaproteobacteria,2YUBM@29|Myxococcales	28221|Deltaproteobacteria	S	Threonine/Serine exporter, ThrE	-	-	-	-	-	-	-	-	-	-	-	-	ThrE
DYD3_k127_2417742_1	675817.VDA_003258	3.873e-163	522.0	COG0183@1|root,COG0183@2|Bacteria,1MU5G@1224|Proteobacteria,1RM93@1236|Gammaproteobacteria,1XUI2@135623|Vibrionales	135623|Vibrionales	I	Catalyzes the final step of fatty acid oxidation in which acetyl-CoA is released and the CoA ester of a fatty acid two carbons shorter is formed	fadA	GO:0003674,GO:0003824,GO:0003988,GO:0006082,GO:0006629,GO:0006631,GO:0008150,GO:0008152,GO:0009056,GO:0009062,GO:0009987,GO:0016042,GO:0016054,GO:0016408,GO:0016740,GO:0016746,GO:0016747,GO:0019752,GO:0032787,GO:0043436,GO:0044237,GO:0044238,GO:0044242,GO:0044248,GO:0044255,GO:0044281,GO:0044282,GO:0046395,GO:0071704,GO:0072329,GO:1901575	2.3.1.16	ko:K00632	ko00071,ko00280,ko00281,ko00362,ko00592,ko00642,ko01100,ko01110,ko01120,ko01130,ko01212,map00071,map00280,map00281,map00362,map00592,map00642,map01100,map01110,map01120,map01130,map01212	M00087,M00113	R00829,R00927,R01177,R03778,R03858,R03991,R04546,R04742,R04747,R05506,R05586,R07891,R07895,R07899,R08091,R08095	RC00004,RC00326,RC00405,RC01702,RC02728,RC02898,RC02955	ko00000,ko00001,ko00002,ko01000	-	-	-	Thiolase_C,Thiolase_N
DYD3_k127_2417742_0	1415780.JPOG01000001_gene1548	7.41e-253	799.0	COG1024@1|root,COG1250@1|root,COG1024@2|Bacteria,COG1250@2|Bacteria,1MU9P@1224|Proteobacteria,1RMZ8@1236|Gammaproteobacteria,1X486@135614|Xanthomonadales	135614|Xanthomonadales	I	3-hydroxyacyl-coa dehydrogenase	-	-	-	-	-	-	-	-	-	-	-	-	3HCDH,3HCDH_N,ECH_1
DYD3_k127_2417742_5	1123073.KB899241_gene2291	2.761e-71	243.0	COG0386@1|root,COG0386@2|Bacteria,1RD1R@1224|Proteobacteria,1S425@1236|Gammaproteobacteria,1X610@135614|Xanthomonadales	135614|Xanthomonadales	O	Belongs to the glutathione peroxidase family	gpo	-	1.11.1.9	ko:K00432	ko00480,ko00590,ko04918,map00480,map00590,map04918	-	R00274,R07034,R07035	RC00011,RC00982	ko00000,ko00001,ko01000	-	-	-	GSHPx
DYD3_k127_2417742_3	1183438.GKIL_3901	4.139e-136	443.0	COG1979@1|root,COG1979@2|Bacteria	2|Bacteria	C	1-butanol biosynthetic process	yqhD	-	-	ko:K00100,ko:K08325,ko:K19955	ko00640,ko00650,ko01120,map00640,map00650,map01120	-	R02528,R03544,R03545	RC00087,RC00739	ko00000,ko00001,ko01000	-	-	-	Fe-ADH
DYD3_k127_2417742_9	1353529.M899_1778	4.168e-39	153.0	COG3148@1|root,COG3148@2|Bacteria,1QJR0@1224|Proteobacteria,42UN7@68525|delta/epsilon subdivisions,2MUDY@213481|Bdellovibrionales,2WQDN@28221|Deltaproteobacteria	213481|Bdellovibrionales	S	DTW	-	-	-	-	-	-	-	-	-	-	-	-	DTW
DYD3_k127_2417742_11	273068.TTE1413	2.15e-35	143.0	COG1191@1|root,COG1191@2|Bacteria,1TP9K@1239|Firmicutes,248M0@186801|Clostridia,42GJB@68295|Thermoanaerobacterales	186801|Clostridia	K	Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released	fliA	-	-	ko:K02405	ko02020,ko02025,ko02026,ko02040,ko05111,map02020,map02025,map02026,map02040,map05111	-	-	-	ko00000,ko00001,ko02035,ko03021	-	-	-	Sigma70_r2,Sigma70_r3,Sigma70_r4
DYD3_k127_2450378_1	862908.BMS_1384	5.082e-86	301.0	COG0457@1|root,COG0457@2|Bacteria,1NZEU@1224|Proteobacteria,430M4@68525|delta/epsilon subdivisions,2MTSE@213481|Bdellovibrionales,2WVW8@28221|Deltaproteobacteria	213481|Bdellovibrionales	S	Tetratricopeptide repeat	-	-	-	-	-	-	-	-	-	-	-	-	TPR_16
DYD3_k127_2450378_2	862908.BMS_1385	1.735e-79	271.0	2CIQC@1|root,2ZNRR@2|Bacteria,1P8GJ@1224|Proteobacteria,432F7@68525|delta/epsilon subdivisions,2WYER@28221|Deltaproteobacteria	28221|Deltaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_2450378_3	862908.BMS_1386	2.23e-68	252.0	COG3121@1|root,COG3266@1|root,COG3121@2|Bacteria,COG3266@2|Bacteria,1QWY2@1224|Proteobacteria	1224|Proteobacteria	NU	domain, Protein	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_2450378_4	1348583.ATLH01000022_gene2228	1.558e-55	204.0	2DKFZ@1|root,309D6@2|Bacteria,4NEGR@976|Bacteroidetes,1HZN8@117743|Flavobacteriia	976|Bacteroidetes	S	Domain of unknown function (DUF4382)	-	-	-	-	-	-	-	-	-	-	-	-	CarboxypepD_reg,DUF4382
DYD3_k127_2450378_0	862908.BMS_2353	4.498e-103	346.0	COG0820@1|root,COG0820@2|Bacteria,1MUYK@1224|Proteobacteria,42N69@68525|delta/epsilon subdivisions	1224|Proteobacteria	J	Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs	rlmN	GO:0000049,GO:0000154,GO:0001510,GO:0002935,GO:0003674,GO:0003676,GO:0003723,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008169,GO:0008173,GO:0008175,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016426,GO:0016433,GO:0016740,GO:0016741,GO:0022613,GO:0030488,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0048037,GO:0051536,GO:0051539,GO:0051540,GO:0070040,GO:0070475,GO:0071704,GO:0071840,GO:0090304,GO:0097159,GO:0140098,GO:0140101,GO:0140102,GO:1901360,GO:1901363	2.1.1.192	ko:K06941	-	-	-	-	ko00000,ko01000,ko03009	-	-	-	Fer4_14,Radical_SAM
DYD3_k127_2450378_5	349521.HCH_01659	8.83e-43	160.0	COG1179@1|root,COG1179@2|Bacteria,1MWXR@1224|Proteobacteria,1RMT3@1236|Gammaproteobacteria,1XHB5@135619|Oceanospirillales	135619|Oceanospirillales	H	UBA THIF-type NAD FAD binding	-	-	-	ko:K22132	-	-	-	-	ko00000,ko03016	-	-	-	ThiF
DYD3_k127_2484595_0	862908.BMS_2940	1.759e-128	458.0	COG3177@1|root,COG3177@2|Bacteria,1NQRT@1224|Proteobacteria,42YCS@68525|delta/epsilon subdivisions,2MTSZ@213481|Bdellovibrionales,2WUD0@28221|Deltaproteobacteria	213481|Bdellovibrionales	S	Fic/DOC family	-	-	-	-	-	-	-	-	-	-	-	-	Fic
DYD3_k127_2484595_1	1353529.M899_1298	1.147e-16	96.0	COG1196@1|root,COG1196@2|Bacteria	2|Bacteria	D	nuclear chromosome segregation	-	-	-	-	-	-	-	-	-	-	-	-	Cu_amine_oxidN1,DUF1542,DUF4139,DUF4140,FIVAR,GA,Gram_pos_anchor,Rib,YSIRK_signal
DYD3_k127_2492317_8	56110.Oscil6304_1350	5.713e-10	68.0	COG0642@1|root,COG2202@1|root,COG2203@1|root,COG2202@2|Bacteria,COG2203@2|Bacteria,COG2205@2|Bacteria,1GQAF@1117|Cyanobacteria,1HHSK@1150|Oscillatoriales	1117|Cyanobacteria	T	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase	-	-	-	ko:K11959	ko02010,map02010	M00323	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.4.4,3.A.1.4.5	-	-	GAF,HAMP,HATPase_c,HisKA,PAS_4,PAS_9,dCache_1
DYD3_k127_2492317_4	1184267.A11Q_2447	2.974e-92	309.0	COG3842@1|root,COG3842@2|Bacteria,1MU3I@1224|Proteobacteria,42MUK@68525|delta/epsilon subdivisions,2MTW4@213481|Bdellovibrionales,2X5CN@28221|Deltaproteobacteria	213481|Bdellovibrionales	P	Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system	-	-	3.6.3.30,3.6.3.31	ko:K02010,ko:K11072	ko02010,map02010	M00190,M00299	-	-	ko00000,ko00001,ko00002,ko01000,ko02000	3.A.1.10,3.A.1.11.1	-	-	ABC_tran,TOBE_2
DYD3_k127_2492317_2	1184267.A11Q_2446	4.505e-119	402.0	COG1178@1|root,COG1178@2|Bacteria	2|Bacteria	P	thiamine transport	-	-	-	ko:K02011	ko02010,map02010	M00190	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.10	-	-	BPD_transp_1
DYD3_k127_2492317_3	1184267.A11Q_2445	7.506e-95	320.0	COG1840@1|root,COG1840@2|Bacteria,1MXZ8@1224|Proteobacteria,42P50@68525|delta/epsilon subdivisions,2WKU5@28221|Deltaproteobacteria	28221|Deltaproteobacteria	P	PFAM extracellular solute-binding protein family 1	-	-	-	ko:K02012	ko02010,map02010	M00190	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.10	-	-	SBP_bac_11,SBP_bac_6
DYD3_k127_2492317_0	1184267.A11Q_1236	4.822e-174	550.0	COG0180@1|root,COG0180@2|Bacteria,1MV4T@1224|Proteobacteria,42MCV@68525|delta/epsilon subdivisions,2MT25@213481|Bdellovibrionales,2WJI2@28221|Deltaproteobacteria	213481|Bdellovibrionales	J	PFAM aminoacyl-tRNA synthetase class Ib	trpS	-	6.1.1.2	ko:K01867	ko00970,map00970	M00359,M00360	R03664	RC00055,RC00523	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	-	-	-	tRNA-synt_1b
DYD3_k127_2492317_9	1385935.N836_10795	2.025e-05	51.0	2CIIF@1|root,315FB@2|Bacteria,1G6R8@1117|Cyanobacteria,1HBTJ@1150|Oscillatoriales	1117|Cyanobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_2492317_1	713587.THITH_08575	3.072e-121	395.0	COG1741@1|root,COG1741@2|Bacteria,1MWIP@1224|Proteobacteria,1RNVM@1236|Gammaproteobacteria,1WXMH@135613|Chromatiales	135613|Chromatiales	S	Belongs to the pirin family	-	-	-	ko:K06911	-	-	-	-	ko00000	-	-	-	Pirin,Pirin_C
DYD3_k127_2492317_7	1242864.D187_005330	1.64e-24	107.0	COG0745@1|root,COG0745@2|Bacteria	1242864.D187_005330|-	T	phosphorelay signal transduction system	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_2492317_6	1242864.D187_008103	1.482e-57	220.0	COG5002@1|root,COG5002@2|Bacteria,1R5EN@1224|Proteobacteria	1224|Proteobacteria	T	Histidine kinase	-	-	-	-	-	-	-	-	-	-	-	-	GAF_2,HATPase_c,HisKA,PAS,PAS_9,Response_reg
DYD3_k127_2492317_5	862908.BMS_1519	2.368e-62	216.0	COG0450@1|root,COG0450@2|Bacteria,1MWPY@1224|Proteobacteria,42MAJ@68525|delta/epsilon subdivisions,2MTMU@213481|Bdellovibrionales,2WN6W@28221|Deltaproteobacteria	213481|Bdellovibrionales	O	C-terminal domain of 1-Cys peroxiredoxin	ahpC	-	1.11.1.15	ko:K03386	ko04214,map04214	-	-	-	ko00000,ko00001,ko01000,ko04147	-	-	-	1-cysPrx_C,AhpC-TSA
DYD3_k127_2502402_7	1234595.C725_1802	3.78e-23	109.0	COG2829@1|root,COG2829@2|Bacteria,1PC8I@1224|Proteobacteria,2UNU9@28211|Alphaproteobacteria	28211|Alphaproteobacteria	M	Phospholipase A1	-	-	-	-	-	-	-	-	-	-	-	-	PLA1
DYD3_k127_2502402_5	765869.BDW_13685	5.655e-45	171.0	COG3137@1|root,COG3137@2|Bacteria,1N2DE@1224|Proteobacteria,42W9S@68525|delta/epsilon subdivisions,2MT9W@213481|Bdellovibrionales,2WTC1@28221|Deltaproteobacteria	213481|Bdellovibrionales	M	Protein of unknown function, DUF481	-	-	-	ko:K07283	-	-	-	-	ko00000	-	-	-	DUF481
DYD3_k127_2502402_9	1423790.BN53_00380	3.436e-15	88.0	2AYWY@1|root,3354X@2|Bacteria,1VUSY@1239|Firmicutes,4HVEY@91061|Bacilli,3FC0S@33958|Lactobacillaceae	91061|Bacilli	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_2502402_3	1201290.M902_2990	2.752e-77	265.0	COG2135@1|root,COG2135@2|Bacteria,1NA2X@1224|Proteobacteria,4379M@68525|delta/epsilon subdivisions,2MUDR@213481|Bdellovibrionales,2X2DN@28221|Deltaproteobacteria	213481|Bdellovibrionales	S	SOS response associated peptidase (SRAP)	-	-	-	-	-	-	-	-	-	-	-	-	SRAP
DYD3_k127_2502402_2	1267535.KB906767_gene2479	3.123e-99	339.0	COG0531@1|root,COG0531@2|Bacteria,3Y2T1@57723|Acidobacteria,2JI3B@204432|Acidobacteriia	204432|Acidobacteriia	E	Amino acid permease	-	-	-	ko:K03294	-	-	-	-	ko00000	2.A.3.2	-	-	AA_permease_2
DYD3_k127_2502402_11	1123236.KB899377_gene294	0.0002279	49.0	COG2823@1|root,COG2823@2|Bacteria,1PCIJ@1224|Proteobacteria,1RRGP@1236|Gammaproteobacteria,4678Y@72275|Alteromonadaceae	1236|Gammaproteobacteria	S	bacterial OsmY and nodulation domain	osmY	GO:0005575,GO:0005623,GO:0006457,GO:0006950,GO:0006970,GO:0006972,GO:0008150,GO:0009628,GO:0009987,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0044464,GO:0050896,GO:0061077	-	ko:K04065	-	-	-	-	ko00000	-	-	-	BON
DYD3_k127_2502402_4	862908.BMS_1010	1.223e-60	219.0	COG0726@1|root,COG0726@2|Bacteria	2|Bacteria	G	polysaccharide deacetylase	-	-	3.5.1.104	ko:K22278	-	-	-	-	ko00000,ko01000	-	-	-	Polysacc_deac_1
DYD3_k127_2502402_0	926550.CLDAP_24530	1.382e-230	729.0	COG3158@1|root,COG3158@2|Bacteria	2|Bacteria	P	potassium ion transmembrane transporter activity	kup	GO:0003674,GO:0005215,GO:0005575,GO:0006810,GO:0006811,GO:0006812,GO:0006813,GO:0008150,GO:0008324,GO:0009987,GO:0015075,GO:0015077,GO:0015079,GO:0015318,GO:0015672,GO:0016020,GO:0022857,GO:0022890,GO:0030001,GO:0034220,GO:0046873,GO:0051179,GO:0051234,GO:0055085,GO:0071804,GO:0071805,GO:0098655,GO:0098660,GO:0098662	-	ko:K03549	-	-	-	-	ko00000,ko02000	2.A.72	-	-	K_trans
DYD3_k127_2502402_6	278963.ATWD01000003_gene88	6.433e-35	146.0	COG1294@1|root,COG1294@2|Bacteria,3Y3UT@57723|Acidobacteria,2JM3E@204432|Acidobacteriia	204432|Acidobacteriia	C	Cytochrome bd terminal oxidase subunit II	-	-	1.10.3.14	ko:K00426	ko00190,ko01100,ko02020,map00190,map01100,map02020	M00153	R11325	RC00061	ko00000,ko00001,ko00002,ko01000	3.D.4.3	-	-	Cyt_bd_oxida_II
DYD3_k127_2502402_1	762903.Pedsa_2289	9.282e-168	539.0	COG1271@1|root,COG1271@2|Bacteria,4NG7U@976|Bacteroidetes,1INY9@117747|Sphingobacteriia	976|Bacteroidetes	C	Cytochrome bd ubiquinol oxidase subunit I	cydA	-	1.10.3.14	ko:K00425	ko00190,ko01100,ko02020,map00190,map01100,map02020	M00153	R11325	RC00061	ko00000,ko00001,ko00002,ko01000	3.D.4.3	-	-	Cyt_bd_oxida_I
DYD3_k127_2502402_8	211165.AJLN01000100_gene4080	3.865e-18	100.0	COG5549@1|root,COG5549@2|Bacteria,1G2AK@1117|Cyanobacteria,1JI4Z@1189|Stigonemataceae	1117|Cyanobacteria	O	Domain of unknown function (DUF5118)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4953,DUF5117,DUF5118
DYD3_k127_250288_0	1353529.M899_1643	8.63e-35	151.0	COG0457@1|root,COG0457@2|Bacteria	1353529.M899_1643|-	S	peptidyl-tyrosine sulfation	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_2534708_3	765869.BDW_13275	1.383e-40	160.0	COG1287@1|root,COG1287@2|Bacteria,1P4UD@1224|Proteobacteria	1224|Proteobacteria	S	Dolichyl-phosphate-mannose-protein mannosyltransferase	-	-	-	-	-	-	-	-	-	-	-	-	PMT_2
DYD3_k127_2534708_1	1124780.ANNU01000008_gene2655	6.439e-43	163.0	COG1607@1|root,COG1607@2|Bacteria,4NNQF@976|Bacteroidetes,47UYZ@768503|Cytophagia	976|Bacteroidetes	I	Thioesterase superfamily	-	-	-	-	-	-	-	-	-	-	-	-	4HBT
DYD3_k127_2534708_4	1201290.M902_0965	6.366e-39	150.0	2C5K6@1|root,34306@2|Bacteria,1NX7I@1224|Proteobacteria	1224|Proteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	DUF4430
DYD3_k127_2534708_5	118166.JH976537_gene3300	5.465e-23	113.0	2BVTZ@1|root,32U84@2|Bacteria,1G7UE@1117|Cyanobacteria,1HCEE@1150|Oscillatoriales	1117|Cyanobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_2534708_2	1347087.CBYO010000021_gene3192	2.078e-41	169.0	COG3544@1|root,COG3544@2|Bacteria,1UZIE@1239|Firmicutes,4HD94@91061|Bacilli	91061|Bacilli	S	Protein conserved in bacteria	-	-	-	-	-	-	-	-	-	-	-	-	DoxX
DYD3_k127_2553908_1	1121007.AUML01000024_gene322	4.569e-18	89.0	COG1696@1|root,COG1696@2|Bacteria,4NFK5@976|Bacteroidetes,1HWM1@117743|Flavobacteriia,2YH2K@290174|Aquimarina	976|Bacteroidetes	M	Membrane bound O-acyl transferase family	-	-	-	-	-	-	-	-	-	-	-	-	MBOAT
DYD3_k127_2553908_2	1353529.M899_2160	3.251e-14	87.0	COG1716@1|root,COG1716@2|Bacteria	2|Bacteria	T	histone H2A K63-linked ubiquitination	-	-	-	ko:K21832	-	-	-	-	ko00000	-	-	-	FAD_binding_6,FHA,Fer2,FtsK_SpoIIIE,NAD_binding_1,WD40
DYD3_k127_2554165_3	1353529.M899_0320	3.534e-36	139.0	COG4770@1|root,COG4770@2|Bacteria,1P6RE@1224|Proteobacteria,43BQE@68525|delta/epsilon subdivisions,2MUTJ@213481|Bdellovibrionales,2X71H@28221|Deltaproteobacteria	213481|Bdellovibrionales	I	carboxylase	-	-	6.4.1.3,6.4.1.4,6.4.1.5	ko:K01965,ko:K01968,ko:K13777	ko00280,ko00281,ko00630,ko00640,ko01100,ko01120,ko01130,ko01200,map00280,map00281,map00630,map00640,map01100,map01120,map01130,map01200	M00036,M00373,M00741	R01859,R03494,R04138	RC00097,RC00367,RC00609,RC00942	ko00000,ko00001,ko00002,ko01000	-	-	-	Biotin_carb_C,Biotin_carb_N,Biotin_lipoyl,CPSase_L_D2
DYD3_k127_2554165_2	862908.BMS_1994	8.019e-79	270.0	COG1024@1|root,COG1024@2|Bacteria,1MVEC@1224|Proteobacteria,42S4C@68525|delta/epsilon subdivisions,2MT2B@213481|Bdellovibrionales,2WNXY@28221|Deltaproteobacteria	213481|Bdellovibrionales	I	enoyl-CoA hydratase isomerase family protein	-	-	4.2.1.18	ko:K13766	ko00280,ko01100,map00280,map01100	M00036	R02085	RC02416	ko00000,ko00001,ko00002,ko01000	-	-	-	ECH_1
DYD3_k127_2554165_0	1353529.M899_0322	3.711e-263	819.0	COG4799@1|root,COG4799@2|Bacteria,1MVAX@1224|Proteobacteria,42N6D@68525|delta/epsilon subdivisions,2MSQI@213481|Bdellovibrionales,2X5IJ@28221|Deltaproteobacteria	213481|Bdellovibrionales	I	carboxylase	mccB	-	6.4.1.4,6.4.1.5	ko:K01969,ko:K13778	ko00280,ko00281,ko01100,map00280,map00281,map01100	M00036	R03494,R04138	RC00367,RC00942	ko00000,ko00001,ko00002,ko01000	-	-	iAF987.Gmet_3290	Carboxyl_trans
DYD3_k127_2554165_1	1121957.ATVL01000007_gene2240	4.077e-116	395.0	COG1368@1|root,COG1368@2|Bacteria,4NIAA@976|Bacteroidetes,47MRX@768503|Cytophagia	976|Bacteroidetes	M	Sulfatase	-	-	-	ko:K01138	-	-	-	-	ko00000,ko01000	-	-	-	Sulfatase
DYD3_k127_2573666_7	1353529.M899_1797	2.806e-34	135.0	COG1179@1|root,COG1179@2|Bacteria,1MWXR@1224|Proteobacteria,42PHC@68525|delta/epsilon subdivisions,2MSYF@213481|Bdellovibrionales,2WNBT@28221|Deltaproteobacteria	213481|Bdellovibrionales	H	PFAM UBA THIF-type NAD FAD binding protein	-	-	-	ko:K22132	-	-	-	-	ko00000,ko03016	-	-	-	ThiF
DYD3_k127_2573666_14	335541.Swol_1633	1.305e-11	69.0	COG3339@1|root,COG3339@2|Bacteria	2|Bacteria	S	Protein of unknown function (DUF1232)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1232
DYD3_k127_2573666_2	215803.DB30_5068	1.079e-98	335.0	COG0477@1|root,COG2814@2|Bacteria,1QTX0@1224|Proteobacteria,42QJX@68525|delta/epsilon subdivisions,2WKPN@28221|Deltaproteobacteria,2Z26U@29|Myxococcales	28221|Deltaproteobacteria	EGP	Transmembrane secretion effector	-	-	-	-	-	-	-	-	-	-	-	-	MFS_3
DYD3_k127_2573666_11	1184267.A11Q_2245	3.82e-25	121.0	COG0793@1|root,COG0793@2|Bacteria,1MU39@1224|Proteobacteria,42MHD@68525|delta/epsilon subdivisions,2MTIP@213481|Bdellovibrionales,2WJKC@28221|Deltaproteobacteria	213481|Bdellovibrionales	M	Belongs to the peptidase S41A family	-	-	3.4.21.102	ko:K03797	-	-	-	-	ko00000,ko01000,ko01002	-	-	-	PDZ_2,Peptidase_S41
DYD3_k127_2573666_8	1201290.M902_2989	1.253e-29	123.0	COG0782@1|root,COG0782@2|Bacteria,1MZNI@1224|Proteobacteria,42VKP@68525|delta/epsilon subdivisions,2MTA8@213481|Bdellovibrionales,2WSC9@28221|Deltaproteobacteria	213481|Bdellovibrionales	K	Transcription elongation factor, GreA/GreB, C-term	-	-	-	-	-	-	-	-	-	-	-	-	GreA_GreB
DYD3_k127_2573666_5	136993.KB900627_gene20	2.344e-46	172.0	COG3012@1|root,COG3012@2|Bacteria,1MZZK@1224|Proteobacteria,2UACH@28211|Alphaproteobacteria,36YJ3@31993|Methylocystaceae	28211|Alphaproteobacteria	S	SEC-C motif	-	-	-	ko:K09858	-	-	-	-	ko00000	-	-	-	SEC-C
DYD3_k127_2573666_1	639030.JHVA01000001_gene139	1.546e-121	419.0	COG1643@1|root,COG1643@2|Bacteria,3Y38N@57723|Acidobacteria,2JHKA@204432|Acidobacteriia	204432|Acidobacteriia	L	ATP-dependent helicase HrpB	-	-	3.6.4.13	ko:K03579	-	-	-	-	ko00000,ko01000	-	-	-	DEAD,HA2,Helicase_C,HrpB_C
DYD3_k127_2573666_9	1201290.M902_1905	7.666e-28	115.0	COG4728@1|root,COG4728@2|Bacteria,1N6NP@1224|Proteobacteria,42WCY@68525|delta/epsilon subdivisions,2MUCU@213481|Bdellovibrionales,2X2YP@28221|Deltaproteobacteria	213481|Bdellovibrionales	K	Protein of unknown function (DUF1653)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1653
DYD3_k127_2573666_10	1267535.KB906767_gene2906	3.469e-25	120.0	COG1008@1|root,COG1008@2|Bacteria	2|Bacteria	C	NDH-1 shuttles electrons from NAD(P)H, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient	nuoM	GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944	1.6.5.3	ko:K00342	ko00190,ko01100,map00190,map01100	M00144	R11945	RC00061	ko00000,ko00001,ko00002,ko01000	3.D.1	-	-	Proton_antipo_M
DYD3_k127_2573666_3	378806.STAUR_4540	1.367e-78	279.0	COG1009@1|root,COG1009@2|Bacteria,1MW2M@1224|Proteobacteria,42KZE@68525|delta/epsilon subdivisions,2WIPT@28221|Deltaproteobacteria,2YTZ4@29|Myxococcales	28221|Deltaproteobacteria	CP	NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus	-	-	-	-	-	-	-	-	-	-	-	-	Proton_antipo_M,Proton_antipo_N
DYD3_k127_2573666_0	378806.STAUR_4541	1.149e-171	572.0	COG3002@1|root,COG3002@2|Bacteria,1MX5K@1224|Proteobacteria,42ZJD@68525|delta/epsilon subdivisions,2X2MC@28221|Deltaproteobacteria,2YTSJ@29|Myxococcales	28221|Deltaproteobacteria	S	Belongs to the UPF0753 family	-	-	-	ko:K09822	-	-	-	-	ko00000	-	-	-	DUF2309
DYD3_k127_2573666_6	485918.Cpin_5227	2.571e-38	152.0	COG1073@1|root,COG1073@2|Bacteria,4NP3H@976|Bacteroidetes	976|Bacteroidetes	S	Alpha/beta hydrolase family	-	-	-	-	-	-	-	-	-	-	-	-	Abhydrolase_1,Hydrolase_4
DYD3_k127_2573666_4	85643.Tmz1t_1904	6.892e-61	216.0	COG0625@1|root,COG0625@2|Bacteria,1MY47@1224|Proteobacteria,2VI89@28216|Betaproteobacteria,2KWAP@206389|Rhodocyclales	206389|Rhodocyclales	O	Belongs to the GST superfamily	-	-	2.5.1.18	ko:K00799	ko00480,ko00980,ko00982,ko00983,ko01524,ko05200,ko05204,ko05225,ko05418,map00480,map00980,map00982,map00983,map01524,map05200,map05204,map05225,map05418	-	R03522,R07002,R07003,R07004,R07023,R07024,R07025,R07026,R07069,R07070,R07083,R07084,R07091,R07092,R07093,R07094,R07100,R07113,R07116,R08280,R09409,R11905	RC00004,RC00069,RC00840,RC00948,RC01704,RC01705,RC01706,RC01758,RC01759,RC01765,RC01767,RC01769,RC02243,RC02527,RC02939,RC02940,RC02942,RC02943,RC02944	ko00000,ko00001,ko01000,ko02000	1.A.12.2.2,1.A.12.3.2	-	-	GST_C,GST_N,GST_N_3
DYD3_k127_2573666_13	909663.KI867151_gene3132	3.091e-12	73.0	COG0774@1|root,COG2204@1|root,COG0774@2|Bacteria,COG2204@2|Bacteria,1MV6T@1224|Proteobacteria,42MVM@68525|delta/epsilon subdivisions,2WJ4I@28221|Deltaproteobacteria,2MRFZ@213462|Syntrophobacterales	28221|Deltaproteobacteria	MT	UDP-3-O-acyl N-acetylglycosamine deacetylase	lpxC	-	3.5.1.108	ko:K02535,ko:K13599	ko00540,ko01100,ko02020,map00540,map01100,map02020	M00060,M00498	R04587	RC00166,RC00300	ko00000,ko00001,ko00002,ko01000,ko01005,ko02022	-	-	-	LpxC
DYD3_k127_2573666_12	1206733.BAGC01000048_gene2372	1.958e-16	94.0	COG0661@1|root,COG0661@2|Bacteria,2GJQ6@201174|Actinobacteria,4G0D1@85025|Nocardiaceae	201174|Actinobacteria	S	ABC1 family	ubiB	-	-	ko:K03688	-	-	-	-	ko00000	-	-	-	ABC1,APH
DYD3_k127_2581627_16	1541065.JRFE01000014_gene1450	3.072e-27	117.0	COG4251@1|root,COG5000@1|root,COG5002@1|root,COG4251@2|Bacteria,COG5000@2|Bacteria,COG5002@2|Bacteria,1G0A1@1117|Cyanobacteria,3VHNF@52604|Pleurocapsales	1117|Cyanobacteria	T	PFAM Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase	-	-	-	-	-	-	-	-	-	-	-	-	HATPase_c,HisKA,PAS_3,PAS_4,PAS_9
DYD3_k127_2581627_2	1353529.M899_3054	7.46e-181	586.0	COG1196@1|root,COG1196@2|Bacteria,1PVEZ@1224|Proteobacteria,4378E@68525|delta/epsilon subdivisions,2MTMB@213481|Bdellovibrionales,2WTSG@28221|Deltaproteobacteria	213481|Bdellovibrionales	D	nuclear chromosome segregation	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_2581627_5	1353529.M899_3053	6.065e-124	406.0	2C0AB@1|root,33SRP@2|Bacteria,1NT3G@1224|Proteobacteria,42YYQ@68525|delta/epsilon subdivisions,2MTH5@213481|Bdellovibrionales,2WURR@28221|Deltaproteobacteria	213481|Bdellovibrionales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_2581627_13	1353529.M899_3052	5.816e-50	205.0	COG1196@1|root,COG1196@2|Bacteria,1Q6RU@1224|Proteobacteria,433NU@68525|delta/epsilon subdivisions,2MUMP@213481|Bdellovibrionales,2WY5A@28221|Deltaproteobacteria	213481|Bdellovibrionales	DT	nuclear chromosome segregation	-	-	-	-	-	-	-	-	-	-	-	-	FHA
DYD3_k127_2581627_12	378806.STAUR_7633	1.91e-50	194.0	293FU@1|root,2ZQY7@2|Bacteria,1PAUE@1224|Proteobacteria,437XW@68525|delta/epsilon subdivisions,2X9RN@28221|Deltaproteobacteria,2YUR8@29|Myxococcales	28221|Deltaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_2581627_6	862908.BMS_2055	5.039e-113	369.0	COG0623@1|root,COG0623@2|Bacteria,1MV05@1224|Proteobacteria,42MA4@68525|delta/epsilon subdivisions,2WIPU@28221|Deltaproteobacteria	28221|Deltaproteobacteria	I	Enoyl- acyl-carrier-protein reductase NADH	fabI	-	1.3.1.10,1.3.1.9	ko:K00208	ko00061,ko00333,ko00780,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01100,map01130,map01212	M00083,M00572	R01404,R04429,R04430,R04724,R04725,R04955,R04956,R04958,R04959,R04961,R04962,R04966,R04967,R04969,R04970,R07765,R10118,R10122,R11671	RC00052,RC00076,RC00120	ko00000,ko00001,ko00002,ko01000,ko01004	-	-	-	adh_short_C2
DYD3_k127_2581627_14	1353529.M899_1521	1.439e-41	157.0	COG1547@1|root,COG1547@2|Bacteria,1NPV3@1224|Proteobacteria,42XAN@68525|delta/epsilon subdivisions,2WSKH@28221|Deltaproteobacteria	28221|Deltaproteobacteria	S	Domain of unknown function (DUF309)	-	-	-	ko:K09763	-	-	-	-	ko00000	-	-	-	DUF309
DYD3_k127_2581627_15	862908.BMS_0248	1.826e-32	136.0	COG2981@1|root,COG2981@2|Bacteria	2|Bacteria	E	high-affinity sulfate:proton symporter activity	cysZ	GO:0000096,GO:0000097,GO:0000103,GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006082,GO:0006520,GO:0006534,GO:0006790,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0006820,GO:0008150,GO:0008152,GO:0008271,GO:0008272,GO:0008324,GO:0008509,GO:0008512,GO:0008652,GO:0009058,GO:0009069,GO:0009070,GO:0009675,GO:0009987,GO:0015075,GO:0015077,GO:0015078,GO:0015103,GO:0015116,GO:0015291,GO:0015293,GO:0015294,GO:0015295,GO:0015296,GO:0015318,GO:0015672,GO:0015698,GO:0016020,GO:0016021,GO:0016053,GO:0019344,GO:0019752,GO:0022804,GO:0022857,GO:0022890,GO:0031224,GO:0031226,GO:0034220,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0044425,GO:0044459,GO:0044464,GO:0046394,GO:0051179,GO:0051234,GO:0055085,GO:0071704,GO:0071944,GO:0072348,GO:0098655,GO:0098656,GO:0098660,GO:0098661,GO:0098662,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607,GO:1901682,GO:1902358,GO:1902600	-	ko:K06203	-	-	-	-	ko00000	-	-	iJR904.b2413,iYL1228.KPN_02760	EI24
DYD3_k127_2581627_7	338969.Rfer_3496	3.953e-106	353.0	28HGI@1|root,2Z7SC@2|Bacteria,1MWKC@1224|Proteobacteria,2VP5Q@28216|Betaproteobacteria,4AGW7@80864|Comamonadaceae	28216|Betaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_2581627_17	1353529.M899_1518	2.908e-11	74.0	COG0859@1|root,COG0859@2|Bacteria	2|Bacteria	M	ADP-heptose-lipopolysaccharide heptosyltransferase activity	-	-	-	ko:K02849	ko00540,ko01100,map00540,map01100	M00080	-	-	ko00000,ko00001,ko00002,ko01000,ko01003,ko01005	-	GT9	-	Glyco_transf_9
DYD3_k127_2581627_0	1201290.M902_0258	0.0	1203.0	COG0525@1|root,COG0525@2|Bacteria,1MV7B@1224|Proteobacteria,42MPZ@68525|delta/epsilon subdivisions,2MSPR@213481|Bdellovibrionales,2WIR9@28221|Deltaproteobacteria	213481|Bdellovibrionales	J	amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner	valS	GO:0003674,GO:0003824,GO:0004812,GO:0004832,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006438,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576	6.1.1.9	ko:K01873	ko00970,map00970	M00359,M00360	R03665	RC00055,RC00523	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	-	-	-	Anticodon_1,Val_tRNA-synt_C,tRNA-synt_1
DYD3_k127_2581627_4	862908.BMS_0446	2.294e-124	412.0	COG0124@1|root,COG0124@2|Bacteria,1MV2K@1224|Proteobacteria,42MG0@68525|delta/epsilon subdivisions,2MT5M@213481|Bdellovibrionales,2WJE1@28221|Deltaproteobacteria	213481|Bdellovibrionales	J	PFAM tRNA synthetase, class II (G, H, P and S)	hisS	-	6.1.1.21	ko:K01892	ko00970,map00970	M00359,M00360	R03655	RC00055,RC00523	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	-	-	-	HGTP_anticodon,tRNA-synt_His
DYD3_k127_2581627_1	862908.BMS_0256	2.369e-312	968.0	COG0247@1|root,COG0247@2|Bacteria,1MUMH@1224|Proteobacteria,42MIV@68525|delta/epsilon subdivisions,2WJ5X@28221|Deltaproteobacteria	28221|Deltaproteobacteria	C	4Fe-4S ferredoxin iron-sulfur binding domain protein	-	-	-	-	-	-	-	-	-	-	-	-	CCG,Fer4_10,Fer4_8,Nitrate_red_gam
DYD3_k127_2581627_10	862908.BMS_0259	9.812e-81	277.0	COG1281@1|root,COG1281@2|Bacteria,1PJ1U@1224|Proteobacteria,4374V@68525|delta/epsilon subdivisions,2MTFN@213481|Bdellovibrionales,2X20N@28221|Deltaproteobacteria	213481|Bdellovibrionales	O	Hsp33 protein	hslO	-	-	ko:K04083	-	-	-	-	ko00000,ko03110	-	-	-	HSP33
DYD3_k127_2581627_9	1353529.M899_1509	2.412e-87	317.0	COG2887@1|root,COG2887@2|Bacteria	2|Bacteria	L	Belongs to the helicase family. UvrD subfamily	-	-	3.6.4.12	ko:K16899	-	-	-	-	ko00000,ko01000,ko03400	-	-	-	PDDEXK_1
DYD3_k127_2581627_3	862908.BMS_0261	9.026e-152	507.0	COG1074@1|root,COG1074@2|Bacteria,1MUTF@1224|Proteobacteria,42NKH@68525|delta/epsilon subdivisions,2MTQA@213481|Bdellovibrionales,2WS57@28221|Deltaproteobacteria	213481|Bdellovibrionales	L	Belongs to the helicase family. UvrD subfamily	-	-	3.6.4.12	ko:K16898	-	-	-	-	ko00000,ko01000,ko03400	-	-	-	PDDEXK_1,UvrD-helicase,UvrD_C
DYD3_k127_2582196_0	1353529.M899_0205	1.665e-77	262.0	COG0723@1|root,COG0723@2|Bacteria,1NINP@1224|Proteobacteria,42VKD@68525|delta/epsilon subdivisions,2WRHY@28221|Deltaproteobacteria	28221|Deltaproteobacteria	C	PFAM Rieske 2Fe-2S domain	pcmE	-	1.10.9.1	ko:K02636,ko:K03886	ko00190,ko00195,ko01100,map00190,map00195,map01100	M00151,M00162	R03817,R08409	RC01002	ko00000,ko00001,ko00002,ko00194,ko01000	-	-	-	Rieske
DYD3_k127_2582196_2	1353529.M899_0204	1.643e-67	239.0	COG1413@1|root,COG1413@2|Bacteria	2|Bacteria	C	deoxyhypusine monooxygenase activity	-	-	2.1.1.113	ko:K00590	-	-	-	-	ko00000,ko01000,ko02048	-	-	-	HEAT_2
DYD3_k127_2589101_1	862908.BMS_0148	2.86e-28	114.0	COG1758@1|root,COG1758@2|Bacteria,1N6TX@1224|Proteobacteria,42V07@68525|delta/epsilon subdivisions,2MTCR@213481|Bdellovibrionales,2WRQ6@28221|Deltaproteobacteria	213481|Bdellovibrionales	K	Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits	rpoZ	-	2.7.7.6	ko:K03060	ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020	M00183	R00435,R00441,R00442,R00443	RC02795	br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400	-	-	-	RNA_pol_Rpb6
DYD3_k127_2589101_0	862908.BMS_0149	1.503e-185	598.0	COG1022@1|root,COG1022@2|Bacteria,1MU4D@1224|Proteobacteria,42N2G@68525|delta/epsilon subdivisions,2MSPN@213481|Bdellovibrionales,2WIXB@28221|Deltaproteobacteria	213481|Bdellovibrionales	I	PFAM AMP-dependent synthetase and ligase	-	-	6.2.1.3	ko:K01897	ko00061,ko00071,ko01100,ko01212,ko02024,ko03320,ko04146,ko04216,ko04714,ko04920,map00061,map00071,map01100,map01212,map02024,map03320,map04146,map04216,map04714,map04920	M00086	R01280	RC00004,RC00014	ko00000,ko00001,ko00002,ko01000,ko01004,ko04147	4.C.1.1	-	-	AMP-binding
DYD3_k127_2595343_4	44689.DDB0188211	1.633e-88	307.0	295V0@1|root,2RCTK@2759|Eukaryota,3XBE0@554915|Amoebozoa	554915|Amoebozoa	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_2595343_6	1353529.M899_1820	6.828e-65	239.0	COG3591@1|root,COG3591@2|Bacteria,1NP6U@1224|Proteobacteria,42ZKY@68525|delta/epsilon subdivisions,2MTXG@213481|Bdellovibrionales,2WUS6@28221|Deltaproteobacteria	213481|Bdellovibrionales	E	Belongs to the peptidase S1B family	-	-	-	-	-	-	-	-	-	-	-	-	Trypsin_2
DYD3_k127_2595343_1	1353529.M899_0685	7.566e-153	495.0	COG1196@1|root,COG1196@2|Bacteria,1R3XQ@1224|Proteobacteria,42YF5@68525|delta/epsilon subdivisions,2MSSS@213481|Bdellovibrionales,2WUDV@28221|Deltaproteobacteria	213481|Bdellovibrionales	D	HAD superfamily (subfamily IG) hydrolase 5'-Nucleotidase	surE2	-	-	-	-	-	-	-	-	-	-	-	5_nucleotid
DYD3_k127_2595343_9	862908.BMS_1526	4.234e-17	92.0	COG1396@1|root,COG1396@2|Bacteria	2|Bacteria	K	sequence-specific DNA binding	-	-	2.7.1.196,2.7.1.205	ko:K02760,ko:K20480	ko00500,ko02024,ko02060,map00500,map02024,map02060	M00275	R11170,R11172	RC00017,RC03206	ko00000,ko00001,ko00002,ko01000,ko02000,ko03000	4.A.3.2	-	-	HTH_3,HTH_31
DYD3_k127_2595343_5	862908.BMS_1039	1.256e-87	303.0	COG0667@1|root,COG0667@2|Bacteria,1MVEH@1224|Proteobacteria,42MDR@68525|delta/epsilon subdivisions,2WKUR@28221|Deltaproteobacteria	28221|Deltaproteobacteria	C	aldo keto reductase	-	-	1.1.1.65	ko:K05275	ko00750,ko01100,ko01120,map00750,map01100,map01120	-	R01708	RC00116	ko00000,ko00001,ko01000	-	-	-	Aldo_ket_red
DYD3_k127_2595343_10	160799.PBOR_07320	9.724e-05	54.0	COG0775@1|root,COG0775@2|Bacteria,1U7WK@1239|Firmicutes,4HB8K@91061|Bacilli,26RG2@186822|Paenibacillaceae	91061|Bacilli	E	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively	mtnN	-	3.2.2.9	ko:K01243	ko00270,ko01100,ko01230,map00270,map01100,map01230	M00034,M00609	R00194,R01401	RC00063,RC00318	ko00000,ko00001,ko00002,ko01000	-	-	-	PNP_UDP_1
DYD3_k127_2595343_3	1201290.M902_2455	3.828e-122	400.0	COG1533@1|root,COG1533@2|Bacteria,1NWJ9@1224|Proteobacteria,42P30@68525|delta/epsilon subdivisions,2WIPV@28221|Deltaproteobacteria	28221|Deltaproteobacteria	L	radical SAM domain protein	-	-	4.1.99.14	ko:K03716	-	-	-	-	ko00000,ko01000	-	-	-	-
DYD3_k127_2595343_7	1201288.M900_1528	6.745e-46	171.0	COG3751@1|root,COG3751@2|Bacteria	2|Bacteria	O	2OG-Fe(II) oxygenase superfamily	-	-	-	ko:K07336,ko:K07394	-	-	-	-	ko00000,ko01000	-	-	-	2OG-FeII_Oxy_3
DYD3_k127_2595343_8	404589.Anae109_1654	1.327e-39	153.0	COG2764@1|root,COG2764@2|Bacteria,1RF5T@1224|Proteobacteria,42SN0@68525|delta/epsilon subdivisions,2WPY6@28221|Deltaproteobacteria,2Z0UJ@29|Myxococcales	28221|Deltaproteobacteria	S	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily	-	-	-	ko:K04750	-	-	-	-	ko00000	-	-	-	3-dmu-9_3-mt,Glyoxalase
DYD3_k127_2595343_2	1191523.MROS_1342	1.235e-135	437.0	COG0031@1|root,COG0031@2|Bacteria	2|Bacteria	E	Belongs to the cysteine synthase cystathionine beta- synthase family	cysK	-	2.5.1.47	ko:K01738	ko00270,ko00920,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00270,map00920,map01100,map01110,map01120,map01130,map01200,map01230	M00021	R00897,R03601,R04859	RC00020,RC02814,RC02821	ko00000,ko00001,ko00002,ko01000	-	-	-	PALP
DYD3_k127_2595343_0	1353529.M899_0597	1.395e-242	772.0	COG0021@1|root,COG0021@2|Bacteria,1MUEY@1224|Proteobacteria,42M80@68525|delta/epsilon subdivisions,2MSS1@213481|Bdellovibrionales,2WINJ@28221|Deltaproteobacteria	213481|Bdellovibrionales	G	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate	tkt	-	2.2.1.1	ko:K00615	ko00030,ko00710,ko01051,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00710,map01051,map01100,map01110,map01120,map01130,map01200,map01230	M00004,M00007,M00165,M00167	R01067,R01641,R01830,R06590	RC00032,RC00226,RC00571,RC01560	ko00000,ko00001,ko00002,ko01000	-	-	-	Transket_pyr,Transketolase_C,Transketolase_N
DYD3_k127_2630590_6	862908.BMS_2427	3.183e-20	93.0	COG2832@1|root,COG2832@2|Bacteria,1N7BI@1224|Proteobacteria,42VV6@68525|delta/epsilon subdivisions,2MT87@213481|Bdellovibrionales,2WS0G@28221|Deltaproteobacteria	213481|Bdellovibrionales	S	Protein of unknown function (DUF454)	-	-	-	ko:K09790	-	-	-	-	ko00000	-	-	-	DUF454
DYD3_k127_2630590_2	862908.BMS_2663	8.038e-87	299.0	COG4324@1|root,COG4324@2|Bacteria,1N0FE@1224|Proteobacteria,42TKC@68525|delta/epsilon subdivisions,2MT3T@213481|Bdellovibrionales,2WQ16@28221|Deltaproteobacteria	213481|Bdellovibrionales	S	Putative aminopeptidase	-	-	-	-	-	-	-	-	-	-	-	-	Aminopep
DYD3_k127_2630590_0	862908.BMS_2662	5.749e-106	352.0	COG0189@1|root,COG0189@2|Bacteria,1MVUA@1224|Proteobacteria,42SG1@68525|delta/epsilon subdivisions,2WP1E@28221|Deltaproteobacteria	28221|Deltaproteobacteria	H	Belongs to the prokaryotic GSH synthase family	gshB	-	6.3.2.3	ko:K01920	ko00270,ko00480,ko01100,map00270,map00480,map01100	M00118	R00497,R10994	RC00096,RC00141	ko00000,ko00001,ko00002,ko01000	-	-	-	GSH-S_ATP,GSH-S_N
DYD3_k127_2630590_5	862908.BMS_2656	8.935e-21	106.0	COG4191@1|root,COG4191@2|Bacteria	2|Bacteria	T	Histidine kinase	-	-	-	-	-	-	-	-	-	-	-	-	GAF,GAF_2,GGDEF,HATPase_c,HWE_HK,HisKA_3,PAS,PAS_3,PAS_4,PAS_9,dCache_1
DYD3_k127_2630590_3	1423758.BN55_04100	5.524e-39	149.0	COG1490@1|root,COG1490@2|Bacteria,1V6GH@1239|Firmicutes,4HINN@91061|Bacilli,3F6GK@33958|Lactobacillaceae	91061|Bacilli	J	rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality	dtd	GO:0002161,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006399,GO:0006450,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016070,GO:0016787,GO:0016788,GO:0034641,GO:0034660,GO:0043170,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0051499,GO:0051500,GO:0052689,GO:0065007,GO:0065008,GO:0071704,GO:0090304,GO:0106074,GO:0140098,GO:0140101,GO:1901360	-	ko:K07560	-	-	-	-	ko00000,ko01000,ko03016	-	-	-	Tyr_Deacylase
DYD3_k127_2644877_2	857087.Metme_3844	3.101e-67	240.0	COG0659@1|root,COG0659@2|Bacteria,1MVWV@1224|Proteobacteria,1RMCN@1236|Gammaproteobacteria,1XDZX@135618|Methylococcales	135618|Methylococcales	P	PFAM Sulphate transporter	-	-	-	-	-	-	-	-	-	-	-	-	Sulfate_transp
DYD3_k127_2644877_0	1353529.M899_0824	3.145e-252	801.0	COG0826@1|root,COG0826@2|Bacteria,1MUQG@1224|Proteobacteria,42M8P@68525|delta/epsilon subdivisions,2MTPU@213481|Bdellovibrionales,2WMKS@28221|Deltaproteobacteria	213481|Bdellovibrionales	O	Collagenase	-	-	-	ko:K08303	ko05120,map05120	-	-	-	ko00000,ko00001,ko01000,ko01002	-	-	-	DUF3656,Peptidase_U32
DYD3_k127_2644877_3	862908.BMS_1845	1.092e-65	244.0	COG0737@1|root,COG0737@2|Bacteria,1MX03@1224|Proteobacteria	1224|Proteobacteria	F	Belongs to the 5'-nucleotidase family	cpdB	-	3.1.3.5,3.1.3.6,3.1.4.16,3.6.1.45	ko:K01119,ko:K11751	ko00230,ko00240,ko00760,ko01100,ko01110,map00230,map00240,map00760,map01100,map01110	-	R00183,R00511,R00963,R01126,R01227,R01562,R01569,R01664,R01877,R01968,R02088,R02102,R02148,R02323,R02370,R02719,R03346,R03537,R03538,R03929,R05135	RC00017,RC00078,RC00296	ko00000,ko00001,ko01000	-	-	iE2348C_1286.E2348C_4246,iECS88_1305.ECS88_4396,iLF82_1304.LF82_624	5_nucleotid_C,Metallophos
DYD3_k127_2644877_4	1201288.M900_2067	4.851e-35	137.0	COG1832@1|root,COG1832@2|Bacteria,1PUW7@1224|Proteobacteria,42T5D@68525|delta/epsilon subdivisions,2WPHZ@28221|Deltaproteobacteria	28221|Deltaproteobacteria	S	CoA binding domain	-	-	-	ko:K06929	-	-	-	-	ko00000	-	-	-	CoA_binding_2
DYD3_k127_2644877_1	862908.BMS_0651	8.765e-138	452.0	COG0277@1|root,COG0277@2|Bacteria,1MU6Y@1224|Proteobacteria,42M0V@68525|delta/epsilon subdivisions,2MTEH@213481|Bdellovibrionales,2WIQ1@28221|Deltaproteobacteria	213481|Bdellovibrionales	C	PFAM FAD linked oxidase domain protein	glcD	-	1.1.2.4,1.1.3.15	ko:K00102,ko:K00104	ko00620,ko00630,ko01100,ko01110,ko01120,ko01130,map00620,map00630,map01100,map01110,map01120,map01130	-	R00197,R00475	RC00042,RC00044	ko00000,ko00001,ko01000	-	-	iAF987.Gmet_3245	FAD-oxidase_C,FAD_binding_4
DYD3_k127_2644877_5	1353529.M899_3268	8.591e-24	111.0	COG2933@1|root,COG2933@2|Bacteria	2|Bacteria	J	rRNA processing	rlmM	GO:0000154,GO:0000451,GO:0000453,GO:0001510,GO:0003674,GO:0003824,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008171,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016434,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0070677,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360	2.1.1.186	ko:K06968	-	-	-	-	ko00000,ko01000,ko03009	-	-	-	FtsJ
DYD3_k127_2664263_4	1353529.M899_0118	1.368e-39	149.0	COG0714@1|root,COG0714@2|Bacteria,1MUFN@1224|Proteobacteria,42NCX@68525|delta/epsilon subdivisions,2MSQ0@213481|Bdellovibrionales,2WJUZ@28221|Deltaproteobacteria	213481|Bdellovibrionales	S	ATPase associated with various cellular activities	-	-	-	ko:K03924	-	-	-	-	ko00000,ko01000	-	-	-	AAA_3
DYD3_k127_2664263_2	1353529.M899_0119	3.854e-71	249.0	COG1721@1|root,COG1721@2|Bacteria,1PR6P@1224|Proteobacteria,42VQU@68525|delta/epsilon subdivisions,2WRGW@28221|Deltaproteobacteria	28221|Deltaproteobacteria	S	Protein of unknown function DUF58	-	-	-	-	-	-	-	-	-	-	-	-	DUF58
DYD3_k127_2664263_0	862908.BMS_0114	3.522e-101	338.0	COG2304@1|root,COG2304@2|Bacteria,1MXQ7@1224|Proteobacteria,42NWB@68525|delta/epsilon subdivisions,2MSZT@213481|Bdellovibrionales,2WKKE@28221|Deltaproteobacteria	213481|Bdellovibrionales	S	von Willebrand factor, type A	batA	-	-	ko:K07114	-	-	-	-	ko00000,ko02000	1.A.13.2.2,1.A.13.2.3	-	-	BatA,VWA
DYD3_k127_2664263_1	862908.BMS_0115	6.789e-88	312.0	COG2304@1|root,COG2304@2|Bacteria,1MW51@1224|Proteobacteria,42M45@68525|delta/epsilon subdivisions,2WM19@28221|Deltaproteobacteria	28221|Deltaproteobacteria	K	von Willebrand factor, type A	-	-	-	ko:K07114	-	-	-	-	ko00000,ko02000	1.A.13.2.2,1.A.13.2.3	-	-	TPR_1,TPR_16,TPR_2,VWA,VWA_2
DYD3_k127_2664263_3	1353529.M899_0123	9.648e-62	224.0	COG0457@1|root,COG0457@2|Bacteria,1MXK4@1224|Proteobacteria,42PK9@68525|delta/epsilon subdivisions,2MTTA@213481|Bdellovibrionales,2WM9F@28221|Deltaproteobacteria	213481|Bdellovibrionales	S	Oxygen tolerance	-	-	-	-	-	-	-	-	-	-	-	-	BatD
DYD3_k127_2669621_16	404589.Anae109_4434	8.152e-22	99.0	COG0438@1|root,COG0438@2|Bacteria,1MY5T@1224|Proteobacteria,43085@68525|delta/epsilon subdivisions,2WVFW@28221|Deltaproteobacteria	28221|Deltaproteobacteria	M	PFAM Glycosyl transferase, group 1	-	-	-	-	-	-	-	-	-	-	-	-	Glyco_trans_1_4,Glyco_trans_4_4
DYD3_k127_2669621_13	1242864.D187_005443	4.743e-40	156.0	COG0863@1|root,COG0863@2|Bacteria	2|Bacteria	L	N-4 methylation of cytosine	-	-	2.1.1.72	ko:K00571,ko:K03497	-	-	-	-	ko00000,ko01000,ko02048,ko03000,ko03036,ko04812	-	-	-	N6_N4_Mtase,ParBc,RE_Eco29kI
DYD3_k127_2669621_5	1485544.JQKP01000017_gene629	5.633e-116	378.0	COG0121@1|root,COG0121@2|Bacteria,1MU1J@1224|Proteobacteria,2VJP1@28216|Betaproteobacteria	28216|Betaproteobacteria	S	glutamine amidotransferase	yafJ	-	-	-	-	-	-	-	-	-	-	-	GATase_4
DYD3_k127_2669621_17	246197.MXAN_1277	1.281e-21	109.0	2EEAV@1|root,3385A@2|Bacteria,1NFGT@1224|Proteobacteria,433D3@68525|delta/epsilon subdivisions,2WXH1@28221|Deltaproteobacteria	28221|Deltaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_2669621_19	378806.STAUR_8253	3.861e-17	85.0	COG0784@1|root,COG0784@2|Bacteria,1QA59@1224|Proteobacteria,434UR@68525|delta/epsilon subdivisions,2WZ5U@28221|Deltaproteobacteria,2Z1E0@29|Myxococcales	28221|Deltaproteobacteria	T	cheY-homologous receiver domain	-	-	-	-	-	-	-	-	-	-	-	-	Response_reg
DYD3_k127_2669621_22	215803.DB30_4097	1.784e-12	78.0	2BNKI@1|root,32H9E@2|Bacteria,1PCZV@1224|Proteobacteria,438NP@68525|delta/epsilon subdivisions,2X8T9@28221|Deltaproteobacteria,2YXCN@29|Myxococcales	28221|Deltaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_2669621_2	1123256.KB907928_gene2171	3.701e-165	528.0	COG1301@1|root,COG1301@2|Bacteria,1MU0Q@1224|Proteobacteria,1RMEN@1236|Gammaproteobacteria,1X2YQ@135614|Xanthomonadales	135614|Xanthomonadales	C	Responsible for the transport of dicarboxylates such as succinate, fumarate, and malate	-	-	-	ko:K11103	ko02020,map02020	-	-	-	ko00000,ko00001,ko02000	2.A.23.1.3,2.A.23.1.6,2.A.23.1.7	-	-	SDF
DYD3_k127_2669621_20	941449.dsx2_0328	4.326e-15	83.0	COG0517@1|root,COG0517@2|Bacteria,1RA25@1224|Proteobacteria,42R80@68525|delta/epsilon subdivisions,2WMW6@28221|Deltaproteobacteria,2MARF@213115|Desulfovibrionales	28221|Deltaproteobacteria	S	PFAM CBS domain containing protein	-	-	-	ko:K04767	-	-	-	-	ko00000	-	-	-	CBS
DYD3_k127_2669621_21	1201290.M902_2855	6.467e-14	77.0	COG0589@1|root,COG0589@2|Bacteria	2|Bacteria	T	AMP binding	-	-	2.4.1.266	ko:K09118,ko:K13693	-	-	-	-	ko00000,ko01000,ko01003	-	GT81	-	Usp
DYD3_k127_2669621_18	1279009.ADICEAN_00095	2.459e-18	93.0	COG1670@1|root,COG1670@2|Bacteria	2|Bacteria	J	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins	anmK	-	2.3.1.128	ko:K03790	-	-	-	-	ko00000,ko01000,ko03009	-	-	-	Acetyltransf_3
DYD3_k127_2669621_8	862908.BMS_2404	1.097e-83	291.0	COG4870@1|root,COG4870@2|Bacteria	2|Bacteria	O	transferase activity, transferring glycosyl groups	-	-	-	-	-	-	-	-	-	-	-	-	Big_3,Kelch_1,Peptidase_C1,Peptidase_C25
DYD3_k127_2669621_10	264462.Bd2645	2.327e-79	269.0	COG0572@1|root,COG0572@2|Bacteria,1MWCH@1224|Proteobacteria,42T0E@68525|delta/epsilon subdivisions,2MSY5@213481|Bdellovibrionales,2WPTV@28221|Deltaproteobacteria	213481|Bdellovibrionales	F	Belongs to the uridine kinase family	-	-	2.7.1.19,2.7.1.48	ko:K00855,ko:K00876	ko00240,ko00710,ko00983,ko01100,ko01120,ko01200,map00240,map00710,map00983,map01100,map01120,map01200	M00165,M00166	R00513,R00516,R00517,R00962,R00964,R00967,R00968,R00970,R01523,R01548,R01549,R01880,R02091,R02096,R02097,R02327,R02332,R02371,R02372,R08232	RC00002,RC00017	ko00000,ko00001,ko00002,ko01000	-	-	-	PRK
DYD3_k127_2669621_7	264462.Bd1531	3.472e-92	307.0	COG0035@1|root,COG0035@2|Bacteria,1MV4N@1224|Proteobacteria,42NNR@68525|delta/epsilon subdivisions,2MSWQ@213481|Bdellovibrionales,2WK6M@28221|Deltaproteobacteria	213481|Bdellovibrionales	F	Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate	upp	GO:0003674,GO:0003824,GO:0004849,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006206,GO:0006213,GO:0006220,GO:0006221,GO:0006222,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008655,GO:0009058,GO:0009112,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009124,GO:0009129,GO:0009130,GO:0009156,GO:0009161,GO:0009163,GO:0009165,GO:0009173,GO:0009174,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0018130,GO:0019205,GO:0019206,GO:0019438,GO:0019637,GO:0019693,GO:0034404,GO:0034641,GO:0034654,GO:0042455,GO:0043094,GO:0043097,GO:0043174,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046049,GO:0046131,GO:0046132,GO:0046134,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659	2.4.2.9	ko:K00761	ko00240,ko01100,map00240,map01100	-	R00966	RC00063	ko00000,ko00001,ko01000	-	-	-	UPRTase
DYD3_k127_2669621_3	1184267.A11Q_1750	3.209e-162	519.0	COG0807@1|root,COG0807@2|Bacteria,1MWUM@1224|Proteobacteria,42Q3I@68525|delta/epsilon subdivisions,2MSUK@213481|Bdellovibrionales,2WKQZ@28221|Deltaproteobacteria	213481|Bdellovibrionales	H	Protein of unknown function (DUF1688)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1688
DYD3_k127_2669621_1	264462.Bd1533	2.212e-212	665.0	COG0807@1|root,COG0807@2|Bacteria,1PZGN@1224|Proteobacteria,42QN1@68525|delta/epsilon subdivisions,2MST3@213481|Bdellovibrionales,2WIK3@28221|Deltaproteobacteria	213481|Bdellovibrionales	H	GTP cyclohydrolase N terminal	-	-	-	-	-	-	-	-	-	-	-	-	GTP_CH_N,GTP_cyclohydro2
DYD3_k127_2669621_0	1184267.A11Q_1752	2.46e-252	784.0	COG1012@1|root,COG1012@2|Bacteria,1MUHV@1224|Proteobacteria,42MVJ@68525|delta/epsilon subdivisions,2MSMA@213481|Bdellovibrionales,2WKM4@28221|Deltaproteobacteria	213481|Bdellovibrionales	C	methylmalonate-semialdehyde dehydrogenase	mmsA	-	1.2.1.18,1.2.1.27	ko:K00140	ko00280,ko00410,ko00562,ko00640,ko01100,ko01200,map00280,map00410,map00562,map00640,map01100,map01200	M00013	R00705,R00706,R00922,R00935	RC00004,RC02723,RC02817	ko00000,ko00001,ko00002,ko01000	-	-	-	Aldedh
DYD3_k127_2669621_23	404589.Anae109_3022	2.008e-08	64.0	COG1403@1|root,COG1403@2|Bacteria	2|Bacteria	V	endonuclease activity	-	-	-	ko:K07451	-	-	-	-	ko00000,ko01000,ko02048	-	-	-	HNH,HNH_4
DYD3_k127_2669621_9	1201288.M900_A0225	1.722e-79	279.0	COG0671@1|root,COG0671@2|Bacteria,1RIRR@1224|Proteobacteria,42X79@68525|delta/epsilon subdivisions,2WSVG@28221|Deltaproteobacteria	28221|Deltaproteobacteria	I	PFAM phosphoesterase, PA-phosphatase related	-	-	-	-	-	-	-	-	-	-	-	-	PAP2
DYD3_k127_2669621_15	980584.AFPB01000167_gene1986	1.086e-31	130.0	COG0242@1|root,COG0242@2|Bacteria,4NPGM@976|Bacteroidetes,1I26B@117743|Flavobacteriia	976|Bacteroidetes	J	Polypeptide deformylase	-	-	-	-	-	-	-	-	-	-	-	-	Pep_deformylase
DYD3_k127_2669621_24	1121019.AUMN01000001_gene828	1.497e-07	63.0	28NEM@1|root,2ZBH4@2|Bacteria,2GM8V@201174|Actinobacteria,1WB5N@1268|Micrococcaceae	201174|Actinobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	CHRD
DYD3_k127_2669621_14	1201290.M902_0805	7.198e-38	146.0	COG1694@1|root,COG1694@2|Bacteria,1N02D@1224|Proteobacteria,42W8Z@68525|delta/epsilon subdivisions,2MU7I@213481|Bdellovibrionales,2WS5B@28221|Deltaproteobacteria	213481|Bdellovibrionales	S	MazG-like family	-	-	-	-	-	-	-	-	-	-	-	-	MazG-like
DYD3_k127_2669621_6	55207.KP22_09440	2.298e-108	357.0	COG3129@1|root,COG3129@2|Bacteria,1MUI4@1224|Proteobacteria,1RMVA@1236|Gammaproteobacteria,1MQS0@122277|Pectobacterium	1236|Gammaproteobacteria	J	Specifically methylates the adenine in position 1618 of 23S rRNA	rlmF	GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0008988,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016433,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0052907,GO:0070475,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360	2.1.1.181	ko:K06970	-	-	R07232	RC00003,RC00335	ko00000,ko01000,ko03009	-	-	-	Methyltransf_10
DYD3_k127_2669621_12	1071679.BG57_03600	2.259e-40	154.0	COG2764@1|root,COG2764@2|Bacteria,1RF5T@1224|Proteobacteria,2VTA0@28216|Betaproteobacteria,1KHTX@119060|Burkholderiaceae	28216|Betaproteobacteria	S	glyoxalase bleomycin resistance protein dioxygenase	-	-	-	ko:K04750	-	-	-	-	ko00000	-	-	-	Glyoxalase
DYD3_k127_2669621_11	861299.J421_1050	1.979e-44	166.0	COG1881@1|root,COG1881@2|Bacteria,1ZU1T@142182|Gemmatimonadetes	142182|Gemmatimonadetes	S	Phosphatidylethanolamine-binding protein	-	-	-	ko:K06910	-	-	-	-	ko00000	-	-	-	PBP
DYD3_k127_2669621_25	743720.Psefu_0067	5.216e-05	52.0	29DIQ@1|root,300GG@2|Bacteria,1RJVY@1224|Proteobacteria,1SIH0@1236|Gammaproteobacteria,1YVIM@136845|Pseudomonas putida group	1236|Gammaproteobacteria	S	Protein of unknown function (DUF3617)	-	-	-	-	-	-	-	-	-	-	-	-	DUF3617
DYD3_k127_2669621_4	1184267.A11Q_340	5.503e-150	482.0	COG0820@1|root,COG0820@2|Bacteria,1MUYK@1224|Proteobacteria,42N69@68525|delta/epsilon subdivisions,2MTNF@213481|Bdellovibrionales,2WUGN@28221|Deltaproteobacteria	213481|Bdellovibrionales	J	Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs	-	-	2.1.1.192	ko:K06941	-	-	-	-	ko00000,ko01000,ko03009	-	-	-	Radical_SAM
DYD3_k127_2679328_1	1121939.L861_03125	6.711e-56	199.0	COG0016@1|root,COG0016@2|Bacteria,1MVD7@1224|Proteobacteria,1RN22@1236|Gammaproteobacteria,1XHW3@135619|Oceanospirillales	135619|Oceanospirillales	J	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily	pheS	-	6.1.1.20	ko:K01889	ko00970,map00970	M00359,M00360	R03660	RC00055,RC00523	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	-	-	-	Phe_tRNA-synt_N,tRNA-synt_2d
DYD3_k127_2679328_3	572547.Amico_0699	2.045e-32	134.0	COG0745@1|root,COG0745@2|Bacteria,3TA97@508458|Synergistetes	508458|Synergistetes	K	Two component transcriptional regulator, winged helix family	-	-	-	ko:K07665	ko02020,map02020	M00452,M00745	-	-	ko00000,ko00001,ko00002,ko01504,ko02022	-	-	-	Response_reg,Trans_reg_C
DYD3_k127_2679328_0	862908.BMS_2399	6.373e-82	288.0	2FFQC@1|root,347MN@2|Bacteria,1P3GT@1224|Proteobacteria	1224|Proteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_2679328_2	1353529.M899_2600	1.877e-50	187.0	COG2267@1|root,COG2267@2|Bacteria,1MWF5@1224|Proteobacteria,42T8M@68525|delta/epsilon subdivisions,2MTJB@213481|Bdellovibrionales,2WPBS@28221|Deltaproteobacteria	213481|Bdellovibrionales	I	PFAM alpha beta hydrolase fold	agmH	-	-	-	-	-	-	-	-	-	-	-	Hydrolase_4
DYD3_k127_268404_0	1353529.M899_3140	3.043e-53	192.0	COG1321@1|root,COG1321@2|Bacteria,1NPSR@1224|Proteobacteria,43B3N@68525|delta/epsilon subdivisions,2WQ9R@28221|Deltaproteobacteria	28221|Deltaproteobacteria	K	Helix-turn-helix diphteria tox regulatory element	-	-	-	-	-	-	-	-	-	-	-	-	Fe_dep_repr_C,Fe_dep_repress
DYD3_k127_268404_1	1353529.M899_3138	7.658e-43	166.0	COG3202@1|root,COG3202@2|Bacteria,1MVP5@1224|Proteobacteria,42MNS@68525|delta/epsilon subdivisions,2WSQX@28221|Deltaproteobacteria	28221|Deltaproteobacteria	C	ATP ADP translocase	-	-	-	ko:K03301	-	-	-	-	ko00000	2.A.12	-	-	MFS_1,TLC
DYD3_k127_2703559_0	1353529.M899_0696	5.408e-163	528.0	COG1404@1|root,COG1404@2|Bacteria,1MU3S@1224|Proteobacteria,42Q3Z@68525|delta/epsilon subdivisions,2MSP7@213481|Bdellovibrionales,2WJPC@28221|Deltaproteobacteria	213481|Bdellovibrionales	O	Belongs to the peptidase S8 family	-	-	-	-	-	-	-	-	-	-	-	-	CUB,He_PIG,Peptidase_S8
DYD3_k127_2703559_1	1201288.M900_2353	4.019e-34	144.0	2DN50@1|root,32VJ4@2|Bacteria,1N8HX@1224|Proteobacteria,42VGC@68525|delta/epsilon subdivisions,2WS94@28221|Deltaproteobacteria	28221|Deltaproteobacteria	S	Domain of unknown function (DUF4340)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4340
DYD3_k127_2703559_3	1201288.M900_0936	2.866e-27	118.0	COG1846@1|root,COG1846@2|Bacteria,1NXZJ@1224|Proteobacteria,430BH@68525|delta/epsilon subdivisions,2MU6M@213481|Bdellovibrionales,2WVRG@28221|Deltaproteobacteria	213481|Bdellovibrionales	K	Domain of unknown function (DUF4423)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4423
DYD3_k127_2727021_1	862908.BMS_1942	1.169e-93	313.0	COG0524@1|root,COG0524@2|Bacteria,1MUUC@1224|Proteobacteria	1224|Proteobacteria	G	COG0524 Sugar kinases, ribokinase family	gsk	GO:0003674,GO:0003824,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008906,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0044237	2.7.1.73	ko:K00892	ko00230,map00230	-	R01131,R01228	RC00002,RC00017	ko00000,ko00001,ko01000	-	-	iSDY_1059.SDY_0442	PfkB
DYD3_k127_2727021_3	765869.BDW_05520	2.364e-19	98.0	COG3741@1|root,COG3741@2|Bacteria,1MY4D@1224|Proteobacteria,4313R@68525|delta/epsilon subdivisions,2MTPF@213481|Bdellovibrionales,2WWX1@28221|Deltaproteobacteria	213481|Bdellovibrionales	E	N-formylglutamate amidohydrolase	-	-	-	-	-	-	-	-	-	-	-	-	FGase
DYD3_k127_2727021_8	1353529.M899_1651	1.15e-06	55.0	2968W@1|root,2ZTIY@2|Bacteria,1P4M7@1224|Proteobacteria,433JI@68525|delta/epsilon subdivisions,2MTFW@213481|Bdellovibrionales,2WYBW@28221|Deltaproteobacteria	213481|Bdellovibrionales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_2727021_4	862908.BMS_1950	4.802e-16	90.0	29ACU@1|root,2ZXDA@2|Bacteria,1P4JM@1224|Proteobacteria,432VX@68525|delta/epsilon subdivisions,2MUJS@213481|Bdellovibrionales,2WY0D@28221|Deltaproteobacteria	213481|Bdellovibrionales	S	Hsp20/alpha crystallin family	-	-	-	-	-	-	-	-	-	-	-	-	HSP20
DYD3_k127_2727021_6	1158345.JNLL01000001_gene1630	1.618e-11	68.0	COG1254@1|root,COG1254@2|Bacteria,2G49Q@200783|Aquificae	200783|Aquificae	C	Belongs to the acylphosphatase family	-	-	3.6.1.7	ko:K01512	ko00620,ko00627,ko01120,map00620,map00627,map01120	-	R00317,R01421,R01515	RC00043	ko00000,ko00001,ko01000	-	-	-	Acylphosphatase
DYD3_k127_2730509_5	215803.DB30_0063	1.418e-22	102.0	COG0781@1|root,COG0781@2|Bacteria,1N94P@1224|Proteobacteria,42SEA@68525|delta/epsilon subdivisions,2WQP9@28221|Deltaproteobacteria,2YVKR@29|Myxococcales	28221|Deltaproteobacteria	K	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons	nusB	-	-	ko:K03625	-	-	-	-	ko00000,ko03009,ko03021	-	-	-	NusB
DYD3_k127_2730509_2	1304284.L21TH_0627	1.451e-47	175.0	COG1327@1|root,COG1327@2|Bacteria,1V3JA@1239|Firmicutes,24HFT@186801|Clostridia,36HY1@31979|Clostridiaceae	186801|Clostridia	K	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes	nrdR	-	-	ko:K07738	-	-	-	-	ko00000,ko03000	-	-	-	ATP-cone
DYD3_k127_2730509_7	5111.M1VZQ4	2.301e-05	49.0	2CU1F@1|root,2RIS6@2759|Eukaryota	2759|Eukaryota	O	Kazal-type serine protease inhibitor domain	-	-	-	-	-	-	-	-	-	-	-	-	Kazal_1,Kazal_2
DYD3_k127_2730509_0	439235.Dalk_3310	1.951e-165	529.0	COG0112@1|root,COG0112@2|Bacteria,1MUIS@1224|Proteobacteria,42M0T@68525|delta/epsilon subdivisions,2WJ3C@28221|Deltaproteobacteria,2MHY8@213118|Desulfobacterales	28221|Deltaproteobacteria	E	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism	glyA	-	2.1.2.1	ko:K00600	ko00260,ko00460,ko00630,ko00670,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko01523,map00260,map00460,map00630,map00670,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map01523	M00140,M00141,M00346,M00532	R00945,R09099	RC00022,RC00112,RC01583,RC02958	ko00000,ko00001,ko00002,ko01000	-	-	-	SHMT
DYD3_k127_2730509_3	349521.HCH_06530	2.341e-26	118.0	29802@1|root,2ZV65@2|Bacteria,1NCI9@1224|Proteobacteria,1SW63@1236|Gammaproteobacteria	1236|Gammaproteobacteria	-	-	-	-	-	ko:K07090	-	-	-	-	ko00000	-	-	-	TauE
DYD3_k127_2730509_1	264462.Bd1159	1.448e-55	213.0	2F9M1@1|root,341X9@2|Bacteria,1NY9P@1224|Proteobacteria,430CD@68525|delta/epsilon subdivisions,2MTU3@213481|Bdellovibrionales,2WVTP@28221|Deltaproteobacteria	213481|Bdellovibrionales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_2730509_4	1184267.A11Q_1280	5.495e-24	115.0	2CH0U@1|root,344SI@2|Bacteria,1P3MY@1224|Proteobacteria,43158@68525|delta/epsilon subdivisions,2MTPH@213481|Bdellovibrionales,2WW89@28221|Deltaproteobacteria	213481|Bdellovibrionales	S	Protein of unknown function (DUF1501)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1501
DYD3_k127_2743634_3	765869.BDW_12330	1.332e-09	65.0	COG3271@1|root,COG3271@2|Bacteria	2|Bacteria	-	-	-	-	-	ko:K02450	-	M00331	-	-	ko00000,ko00002,ko02044	9.B.42	-	-	DUF3335,Peptidase_C39,Peptidase_C39_2,TPR_16,TPR_19,TPR_2,TPR_8
DYD3_k127_2743634_0	1201288.M900_1407	3.986e-140	456.0	COG0443@1|root,COG0443@2|Bacteria,1MXBT@1224|Proteobacteria,42PF4@68525|delta/epsilon subdivisions,2MSP5@213481|Bdellovibrionales,2WKA8@28221|Deltaproteobacteria	213481|Bdellovibrionales	O	Belongs to the heat shock protein 70 family	-	-	-	ko:K04046	-	-	-	-	ko00000,ko03110	1.A.33	-	-	HSP70
DYD3_k127_2743634_2	1353529.M899_0981	5.851e-39	150.0	COG0526@1|root,COG0526@2|Bacteria,1Q24R@1224|Proteobacteria,437RY@68525|delta/epsilon subdivisions,2MUH6@213481|Bdellovibrionales,2X30S@28221|Deltaproteobacteria	213481|Bdellovibrionales	CO	AhpC/TSA family	-	-	-	-	-	-	-	-	-	-	-	-	AhpC-TSA
DYD3_k127_2743634_1	264462.Bd2916	1.375e-57	209.0	COG1917@1|root,COG2207@1|root,COG1917@2|Bacteria,COG2207@2|Bacteria,1QY2I@1224|Proteobacteria,43C9U@68525|delta/epsilon subdivisions,2MTXX@213481|Bdellovibrionales,2WWRW@28221|Deltaproteobacteria	213481|Bdellovibrionales	K	helix_turn_helix, arabinose operon control protein	-	-	-	-	-	-	-	-	-	-	-	-	AraC_binding,HTH_18
DYD3_k127_2743691_3	862908.BMS_3219	7.367e-86	291.0	COG0583@1|root,COG0583@2|Bacteria,1MU2E@1224|Proteobacteria,42T5W@68525|delta/epsilon subdivisions,2MTTD@213481|Bdellovibrionales,2WPVR@28221|Deltaproteobacteria	213481|Bdellovibrionales	K	transcriptional regulator	-	-	-	-	-	-	-	-	-	-	-	-	HTH_1,LysR_substrate
DYD3_k127_2743691_1	1069080.KB913028_gene1398	3.035e-167	531.0	COG1073@1|root,COG1073@2|Bacteria,1TPW7@1239|Firmicutes,4H3KY@909932|Negativicutes	909932|Negativicutes	S	Dienelactone hydrolase family	-	-	-	ko:K06889	-	-	-	-	ko00000	-	-	-	DLH
DYD3_k127_2743691_2	264462.Bd3690	8.657e-136	442.0	COG0477@1|root,COG2814@2|Bacteria,1MVD0@1224|Proteobacteria,42QBJ@68525|delta/epsilon subdivisions,2MTU0@213481|Bdellovibrionales,2WMZ6@28221|Deltaproteobacteria	213481|Bdellovibrionales	EGP	Major Facilitator Superfamily	-	-	-	ko:K03445	-	-	-	-	ko00000,ko02000	2.A.1.2.26	-	-	MFS_1
DYD3_k127_2743691_6	526218.Sterm_3792	1.965e-29	121.0	COG4925@1|root,COG4925@2|Bacteria,37AYX@32066|Fusobacteria	32066|Fusobacteria	I	sulfurtransferase activity	-	-	-	-	-	-	-	-	-	-	-	-	Cyclophil_like
DYD3_k127_2743691_0	765869.BDW_10310	8.789e-291	908.0	COG2132@1|root,COG2132@2|Bacteria,1MU0J@1224|Proteobacteria,42PNF@68525|delta/epsilon subdivisions,2WKN3@28221|Deltaproteobacteria	28221|Deltaproteobacteria	Q	Multicopper oxidase	copA	-	1.16.3.3	ko:K22348	-	-	-	-	ko00000,ko01000	-	-	-	Cu-oxidase,Cu-oxidase_2,Cu-oxidase_3
DYD3_k127_2743691_4	1049564.TevJSym_ap00120	8.155e-39	149.0	COG3019@1|root,COG3019@2|Bacteria,1MZ9V@1224|Proteobacteria,1S9CQ@1236|Gammaproteobacteria,1J6NS@118884|unclassified Gammaproteobacteria	1236|Gammaproteobacteria	S	Protein of unknown function, DUF	-	-	-	-	-	-	-	-	-	-	-	-	DUF411
DYD3_k127_2743691_5	349521.HCH_04213	5.271e-37	150.0	COG2207@1|root,COG2207@2|Bacteria,1MWCA@1224|Proteobacteria,1S31C@1236|Gammaproteobacteria,1XK5P@135619|Oceanospirillales	135619|Oceanospirillales	K	helix_turn_helix, arabinose operon control protein	-	-	-	-	-	-	-	-	-	-	-	-	HTH_18
DYD3_k127_2787043_6	264462.Bd1577	8.768e-38	154.0	COG0477@1|root,COG2814@2|Bacteria,1PEUD@1224|Proteobacteria,42ZNU@68525|delta/epsilon subdivisions,2MTV0@213481|Bdellovibrionales,2WUXK@28221|Deltaproteobacteria	213481|Bdellovibrionales	EGP	Major Facilitator Superfamily	-	-	-	-	-	-	-	-	-	-	-	-	MFS_1
DYD3_k127_2787043_2	264462.Bd1576	1.479e-133	445.0	COG4264@1|root,COG4264@2|Bacteria,1QUJJ@1224|Proteobacteria,42UJM@68525|delta/epsilon subdivisions,2MTNV@213481|Bdellovibrionales,2WQ5X@28221|Deltaproteobacteria	213481|Bdellovibrionales	Q	IucA / IucC family	-	-	6.3.2.38	ko:K03894	ko00310,ko01120,map00310,map01120	-	R10090	RC00064,RC00090	ko00000,ko00001,ko01000	-	-	-	FhuF,IucA_IucC
DYD3_k127_2787043_3	264462.Bd1575	1.845e-85	294.0	COG1670@1|root,COG1670@2|Bacteria,1MWIE@1224|Proteobacteria,42XSJ@68525|delta/epsilon subdivisions,2MTVX@213481|Bdellovibrionales,2WSSB@28221|Deltaproteobacteria	213481|Bdellovibrionales	J	Siderophore biosynthesis protein domain	-	-	2.3.1.102	ko:K03896,ko:K21992	ko00310,ko01120,map00310,map01120	-	R03168	RC00004,RC00865	ko00000,ko00001,ko01000	-	-	-	Acetyltransf_8
DYD3_k127_2787043_0	264462.Bd1574	2.669e-168	546.0	COG4264@1|root,COG4264@2|Bacteria,1MVUU@1224|Proteobacteria,42R7F@68525|delta/epsilon subdivisions,2MTUU@213481|Bdellovibrionales,2WMTX@28221|Deltaproteobacteria	213481|Bdellovibrionales	Q	IucA / IucC family	iucC	-	6.3.2.39	ko:K03895	ko00310,ko01120,map00310,map01120	-	R10091	RC00064,RC00090	ko00000,ko00001,ko01000	-	-	-	FhuF,IucA_IucC
DYD3_k127_2787043_1	323261.Noc_1811	6.025e-150	485.0	COG3486@1|root,COG3486@2|Bacteria,1MX36@1224|Proteobacteria,1RNB9@1236|Gammaproteobacteria	1236|Gammaproteobacteria	Q	l-lysine 6-monooxygenase	iucD	-	1.14.13.195,1.14.13.196,1.14.13.59	ko:K03897,ko:K10531	ko00310,ko01120,map00310,map01120	-	R00448	RC00298	ko00000,ko00001,ko01000	-	-	-	K_oxygenase
DYD3_k127_2787043_7	376686.Fjoh_4040	9.25e-21	104.0	COG3182@1|root,COG3182@2|Bacteria,4NEXX@976|Bacteroidetes,1HZF7@117743|Flavobacteriia,2P03C@237|Flavobacterium	976|Bacteroidetes	S	PepSY-associated TM region	-	-	-	-	-	-	-	-	-	-	-	-	PepSY_TM
DYD3_k127_2787043_4	760192.Halhy_2294	2.913e-72	260.0	COG3746@1|root,COG3746@2|Bacteria,4P3MR@976|Bacteroidetes	976|Bacteroidetes	P	phosphate-selective porin O and P	-	-	-	-	-	-	-	-	-	-	-	-	Porin_O_P
DYD3_k127_2787043_8	203122.Sde_0375	2.427e-08	66.0	COG2982@1|root,COG2982@2|Bacteria,1PJZH@1224|Proteobacteria,1S1J6@1236|Gammaproteobacteria,466M4@72275|Alteromonadaceae	1236|Gammaproteobacteria	M	Domain of Unknown Function (DUF748)	-	-	-	-	-	-	-	-	-	-	-	-	DUF748
DYD3_k127_2787043_5	1353529.M899_0929	4.862e-56	202.0	COG0702@1|root,COG0702@2|Bacteria,1MZG7@1224|Proteobacteria,42UCW@68525|delta/epsilon subdivisions,2MT3V@213481|Bdellovibrionales,2WQWQ@28221|Deltaproteobacteria	213481|Bdellovibrionales	GM	NAD(P)H-binding	-	-	-	-	-	-	-	-	-	-	-	-	NAD_binding_10
DYD3_k127_2789722_0	862908.BMS_3385	2.054e-150	478.0	COG0648@1|root,COG0648@2|Bacteria,1N9ZF@1224|Proteobacteria,43EYJ@68525|delta/epsilon subdivisions,2WV80@28221|Deltaproteobacteria	28221|Deltaproteobacteria	L	AP endonuclease family 2	-	-	3.1.21.2	ko:K01151	ko03410,map03410	-	-	-	ko00000,ko00001,ko01000,ko03400	-	-	-	AP_endonuc_2
DYD3_k127_2789722_9	1353529.M899_2013	2.034e-20	102.0	COG3093@1|root,COG3093@2|Bacteria,1Q20T@1224|Proteobacteria,437NQ@68525|delta/epsilon subdivisions,2MU86@213481|Bdellovibrionales,2X2WY@28221|Deltaproteobacteria	213481|Bdellovibrionales	K	Domain of unknown function (DUF4423)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4423
DYD3_k127_2789722_5	1201288.M900_A0112	1.821e-49	192.0	COG1075@1|root,COG1075@2|Bacteria	2|Bacteria	KLT	acetyltransferases and hydrolases with the alpha beta hydrolase fold	-	-	-	-	-	-	-	-	-	-	-	-	Abhydrolase_6,Lipase_3,PGAP1
DYD3_k127_2789722_11	400682.PAC_15707030	2.191e-07	54.0	COG1145@1|root,2SU1A@2759|Eukaryota,3ATRZ@33154|Opisthokonta,3C387@33208|Metazoa	33208|Metazoa	C	4Fe-4S binding domain	-	-	-	-	-	-	-	-	-	-	-	-	Fer4
DYD3_k127_2789722_4	862908.BMS_3389	1.405e-51	195.0	COG1208@1|root,COG1208@2|Bacteria,1R9ZD@1224|Proteobacteria,42SI2@68525|delta/epsilon subdivisions,2WPJB@28221|Deltaproteobacteria	28221|Deltaproteobacteria	JM	Nucleotidyl transferase	-	-	2.7.7.13	ko:K00966	ko00051,ko00520,ko01100,ko01110,map00051,map00520,map01100,map01110	M00114,M00361,M00362	R00885	RC00002	ko00000,ko00001,ko00002,ko01000	-	-	-	NTP_transferase
DYD3_k127_2789722_1	862908.BMS_3390	2.904e-87	299.0	COG3178@1|root,COG3178@2|Bacteria,1MXCH@1224|Proteobacteria,42TUJ@68525|delta/epsilon subdivisions,2MSY4@213481|Bdellovibrionales,2WQ4U@28221|Deltaproteobacteria	213481|Bdellovibrionales	S	phosphotransferase related to Ser Thr protein kinases	-	-	2.7.1.221	ko:K07102	ko00520,ko01100,map00520,map01100	-	R08968,R11024	RC00002,RC00078	ko00000,ko00001,ko01000	-	-	-	APH
DYD3_k127_2789722_8	1353529.M899_3462	2.713e-39	155.0	COG1652@1|root,COG1652@2|Bacteria,1PGX0@1224|Proteobacteria,43DQH@68525|delta/epsilon subdivisions,2WR9G@28221|Deltaproteobacteria	28221|Deltaproteobacteria	S	Lysin motif	-	-	-	-	-	-	-	-	-	-	-	-	LysM
DYD3_k127_2789722_3	1120968.AUBX01000009_gene565	4.177e-67	236.0	COG1428@1|root,COG1428@2|Bacteria,4NFA8@976|Bacteroidetes,47P9Q@768503|Cytophagia	976|Bacteroidetes	F	deoxynucleoside kinase	dck	-	-	-	-	-	-	-	-	-	-	-	dNK
DYD3_k127_2789722_7	862908.BMS_3395	1.424e-39	153.0	COG0801@1|root,COG0801@2|Bacteria,1MZH8@1224|Proteobacteria,42TJ2@68525|delta/epsilon subdivisions,2WQ4P@28221|Deltaproteobacteria	28221|Deltaproteobacteria	H	PFAM 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK	folK	-	2.7.6.3	ko:K00950	ko00790,ko01100,map00790,map01100	M00126,M00841	R03503	RC00002,RC00017	ko00000,ko00001,ko00002,ko01000	-	-	-	HPPK
DYD3_k127_2789722_12	1205680.CAKO01000029_gene4987	0.0001919	44.0	COG2114@1|root,COG2114@2|Bacteria,1MVZU@1224|Proteobacteria,2U128@28211|Alphaproteobacteria,2JWF3@204441|Rhodospirillales	204441|Rhodospirillales	T	Adenylyl- / guanylyl cyclase, catalytic domain	-	-	4.6.1.1	ko:K01768	ko00230,ko02025,ko04113,ko04213,map00230,map02025,map04113,map04213	M00695	R00089,R00434	RC00295	ko00000,ko00001,ko00002,ko01000	-	-	-	Guanylate_cyc
DYD3_k127_2817725_0	862908.BMS_3201	5.579e-108	364.0	COG2204@1|root,COG2204@2|Bacteria,1MU0N@1224|Proteobacteria,42M03@68525|delta/epsilon subdivisions,2WIT0@28221|Deltaproteobacteria	28221|Deltaproteobacteria	T	two component, sigma54 specific, transcriptional regulator, Fis family	-	-	-	-	-	-	-	-	-	-	-	-	FHA,HTH_8,Response_reg,Sigma54_activat
DYD3_k127_2817725_2	1353529.M899_1462	2.507e-76	263.0	COG3568@1|root,COG3568@2|Bacteria,1PPNP@1224|Proteobacteria,42QW2@68525|delta/epsilon subdivisions,2WMRN@28221|Deltaproteobacteria	28221|Deltaproteobacteria	L	PFAM Endonuclease Exonuclease phosphatase	-	-	-	-	-	-	-	-	-	-	-	-	Exo_endo_phos
DYD3_k127_2817725_1	314345.SPV1_02262	1.034e-105	350.0	COG0688@1|root,COG0688@2|Bacteria,1MVT4@1224|Proteobacteria	1224|Proteobacteria	I	Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer)	psd	-	4.1.1.65	ko:K01613	ko00564,ko01100,ko01110,map00564,map01100,map01110	M00093	R02055	RC00299	ko00000,ko00001,ko00002,ko01000	-	-	-	PS_Dcarbxylase
DYD3_k127_2818552_5	862908.BMS_2510	1.798e-73	252.0	COG1055@1|root,COG1055@2|Bacteria,1N68M@1224|Proteobacteria,42PD9@68525|delta/epsilon subdivisions,2MTG9@213481|Bdellovibrionales,2WKRV@28221|Deltaproteobacteria	213481|Bdellovibrionales	P	Putative Na+/H+ antiporter	-	-	-	-	-	-	-	-	-	-	-	-	Na_H_antiport_3
DYD3_k127_2818552_11	1201288.M900_1864	4.693e-38	143.0	COG1141@1|root,COG1141@2|Bacteria	2|Bacteria	C	electron transfer activity	rnfB	-	-	ko:K03616,ko:K05337	-	-	-	-	ko00000	-	-	-	FeS,Fer4,Fer4_13
DYD3_k127_2818552_1	1201290.M902_1057	1.371e-187	602.0	COG1109@1|root,COG1109@2|Bacteria,1QUGD@1224|Proteobacteria,43BUU@68525|delta/epsilon subdivisions,2WKYP@28221|Deltaproteobacteria	28221|Deltaproteobacteria	G	phosphoglucomutase phosphomannomutase alpha beta alpha domain I	-	-	5.4.2.2,5.4.2.8	ko:K01835,ko:K01840	ko00010,ko00030,ko00051,ko00052,ko00230,ko00500,ko00520,ko00521,ko01100,ko01110,ko01120,ko01130,map00010,map00030,map00051,map00052,map00230,map00500,map00520,map00521,map01100,map01110,map01120,map01130	M00114,M00549	R00959,R01057,R01818,R08639	RC00408	ko00000,ko00001,ko00002,ko01000	-	-	-	PGM_PMM_I,PGM_PMM_II,PGM_PMM_III,PGM_PMM_IV
DYD3_k127_2818552_3	862908.BMS_2513	2.846e-90	302.0	COG0603@1|root,COG0603@2|Bacteria,1MU5V@1224|Proteobacteria,42MKZ@68525|delta/epsilon subdivisions,2MT75@213481|Bdellovibrionales,2WING@28221|Deltaproteobacteria	213481|Bdellovibrionales	F	Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0))	queC	-	6.3.4.20	ko:K06920	ko00790,ko01100,map00790,map01100	-	R09978	RC00959	ko00000,ko00001,ko01000,ko03016	-	-	iAF987.Gmet_3075	QueC
DYD3_k127_2818552_9	1353529.M899_1874	8.689e-47	185.0	COG2206@1|root,COG2206@2|Bacteria	2|Bacteria	T	PFAM metal-dependent phosphohydrolase, HD sub domain	cnpD3	-	3.6.1.11,3.6.1.40	ko:K01524,ko:K07016	ko00230,map00230	-	R03409	RC00002	ko00000,ko00001,ko01000,ko02048	-	-	-	HD,HD_5
DYD3_k127_2818552_2	1353529.M899_2494	8.167e-112	368.0	COG1462@1|root,COG1462@2|Bacteria,1N6JH@1224|Proteobacteria,42TMT@68525|delta/epsilon subdivisions,2MT4S@213481|Bdellovibrionales,2WR11@28221|Deltaproteobacteria	213481|Bdellovibrionales	M	curli production assembly transport component CsgG	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_2818552_0	1201290.M902_1156	0.0	1624.0	COG0587@1|root,COG0587@2|Bacteria,1MUIF@1224|Proteobacteria,42MGP@68525|delta/epsilon subdivisions,2MSV5@213481|Bdellovibrionales,2WIZ2@28221|Deltaproteobacteria	213481|Bdellovibrionales	L	DNA polymerase III alpha subunit	-	-	2.7.7.7	ko:K02337	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	M00260	R00375,R00376,R00377,R00378	RC02795	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	-	-	-	DNA_pol3_alpha,HHH_6,PHP
DYD3_k127_2818552_4	1201288.M900_A0500	4.023e-89	306.0	COG1398@1|root,COG1398@2|Bacteria,1N2MA@1224|Proteobacteria,42YFC@68525|delta/epsilon subdivisions,2MTMM@213481|Bdellovibrionales,2WU03@28221|Deltaproteobacteria	213481|Bdellovibrionales	I	desaturase	-	-	1.14.19.1	ko:K00507	ko01040,ko01212,ko03320,ko04152,ko04212,map01040,map01212,map03320,map04152,map04212	-	R02222	RC00917	ko00000,ko00001,ko01000,ko01004	-	-	-	FA_desaturase
DYD3_k127_2818552_6	264462.Bd3361	1.476e-70	246.0	COG2375@1|root,COG2375@2|Bacteria,1R4TD@1224|Proteobacteria,42Y77@68525|delta/epsilon subdivisions,2MTXR@213481|Bdellovibrionales,2WUMY@28221|Deltaproteobacteria	213481|Bdellovibrionales	P	Siderophore-interacting protein	mxcB	-	-	-	-	-	-	-	-	-	-	-	FAD_binding_9,SIP
DYD3_k127_2818552_10	32049.SYNPCC7002_A0554	2.413e-45	171.0	COG0235@1|root,COG0235@2|Bacteria,1G2EA@1117|Cyanobacteria,1H0B9@1129|Synechococcus	1117|Cyanobacteria	H	Catalyzes the dehydration of methylthioribulose-1- phosphate (MTRu-1-P) into 2,3-diketo-5-methylthiopentyl-1- phosphate (DK-MTP-1-P)	mtnB	-	4.2.1.109	ko:K08964	ko00270,ko01100,map00270,map01100	M00034	R07392	RC01939	ko00000,ko00001,ko00002,ko01000	-	-	-	Aldolase_II
DYD3_k127_2818552_7	760192.Halhy_5975	1.85e-62	219.0	COG1791@1|root,COG1791@2|Bacteria	2|Bacteria	S	Catalyzes 2 different reactions between oxygene and the acireductone 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK-MTPene) depending upon the metal bound in the active site. Fe-containing acireductone dioxygenase (Fe-ARD) produces formate and 2-keto-4- methylthiobutyrate (KMTB), the alpha-ketoacid precursor of methionine in the methionine recycle pathway. Ni-containing acireductone dioxygenase (Ni-ARD) produces methylthiopropionate, carbon monoxide and formate, and does not lie on the methionine recycle pathway	mtnD	GO:0000096,GO:0003674,GO:0003824,GO:0006082,GO:0006520,GO:0006555,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009066,GO:0009987,GO:0010309,GO:0016491,GO:0016701,GO:0016702,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0051213,GO:0055114,GO:0071704,GO:1901564,GO:1901605	1.13.11.53,1.13.11.54	ko:K08967	ko00270,ko01100,map00270,map01100	M00034	R07363,R07364	RC01866,RC02018,RC02118	ko00000,ko00001,ko00002,ko01000	-	-	iYL1228.KPN_00643	ARD
DYD3_k127_2818552_8	118168.MC7420_2349	2.757e-61	218.0	COG4229@1|root,COG4229@2|Bacteria,1G5UV@1117|Cyanobacteria,1HB8J@1150|Oscillatoriales	1117|Cyanobacteria	C	Bifunctional enzyme that catalyzes the enolization of 2,3-diketo-5-methylthiopentyl-1-phosphate (DK-MTP-1-P) into the intermediate 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate (HK-MTPenyl-1-P), which is then dephosphorylated to form the acireductone 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK- MTPene)	mtnC	-	3.1.3.77	ko:K09880	ko00270,ko01100,map00270,map01100	M00034	R07395	RC02779	ko00000,ko00001,ko00002,ko01000	-	-	-	HAD_2,Hydrolase
DYD3_k127_2837617_0	1250005.PHEL85_0321	2.147e-118	405.0	COG1198@1|root,COG1198@2|Bacteria,4NFHB@976|Bacteroidetes,1HWZJ@117743|Flavobacteriia,3VVU9@52959|Polaribacter	976|Bacteroidetes	L	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA	priA	-	-	ko:K04066	ko03440,map03440	-	-	-	ko00000,ko00001,ko01000,ko03400	-	-	-	DEAD,Helicase_C,ResIII
DYD3_k127_2837617_1	862908.BMS_3409	2.534e-35	139.0	28XQR@1|root,2ZJME@2|Bacteria,1P7K1@1224|Proteobacteria,4328C@68525|delta/epsilon subdivisions,2MT8S@213481|Bdellovibrionales,2WX7W@28221|Deltaproteobacteria	213481|Bdellovibrionales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_2841011_12	264462.Bd3266	2.128e-19	102.0	COG3210@1|root,COG3210@2|Bacteria,1NED3@1224|Proteobacteria,42WDX@68525|delta/epsilon subdivisions,2MTVC@213481|Bdellovibrionales,2WRDH@28221|Deltaproteobacteria	213481|Bdellovibrionales	U	cell wall surface anchor family protein	-	-	-	-	-	-	-	-	-	-	-	-	Peptidase_S74
DYD3_k127_2841011_13	264462.Bd0705	7.397e-19	101.0	COG0729@1|root,COG2911@1|root,COG0729@2|Bacteria,COG2911@2|Bacteria,1QY1J@1224|Proteobacteria,430S6@68525|delta/epsilon subdivisions,2MU2E@213481|Bdellovibrionales,2WVNT@28221|Deltaproteobacteria	1224|Proteobacteria	M	Chaperone of endosialidase	-	-	-	-	-	-	-	-	-	-	-	-	Peptidase_S74
DYD3_k127_2841011_11	765869.BDW_04410	2.128e-19	102.0	COG3210@1|root,COG3210@2|Bacteria,1NED3@1224|Proteobacteria,42WDX@68525|delta/epsilon subdivisions,2MTVC@213481|Bdellovibrionales,2WRDH@28221|Deltaproteobacteria	213481|Bdellovibrionales	U	cell wall surface anchor family protein	-	-	-	-	-	-	-	-	-	-	-	-	Peptidase_S74
DYD3_k127_2841011_14	66692.ABC3794	1.597e-15	81.0	COG2963@1|root,COG2963@2|Bacteria,1VBDW@1239|Firmicutes,4HM9H@91061|Bacilli,1ZQDU@1386|Bacillus	91061|Bacilli	L	transposase activity	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_2841011_15	574375.BAGA_08655	4.196e-06	52.0	COG2801@1|root,COG2801@2|Bacteria,1TQEG@1239|Firmicutes,4IPM1@91061|Bacilli,1ZDEF@1386|Bacillus	91061|Bacilli	L	Integrase core domain	-	-	-	-	-	-	-	-	-	-	-	-	HTH_21,rve,rve_2
DYD3_k127_2841011_10	765869.BDW_12470	1.316e-21	95.0	COG2801@1|root,COG2801@2|Bacteria,1PNRG@1224|Proteobacteria,43ASC@68525|delta/epsilon subdivisions,2MUHW@213481|Bdellovibrionales,2X6AZ@28221|Deltaproteobacteria	68525|delta/epsilon subdivisions	L	COG2801 Transposase and inactivated derivatives	-	-	-	-	-	-	-	-	-	-	-	-	HTH_21,rve
DYD3_k127_2841011_3	1201288.M900_0145	1.196e-158	516.0	COG0206@1|root,COG0206@2|Bacteria,1MV2X@1224|Proteobacteria,42MHK@68525|delta/epsilon subdivisions,2MSTJ@213481|Bdellovibrionales,2WJAZ@28221|Deltaproteobacteria	213481|Bdellovibrionales	D	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity	ftsZ	-	-	ko:K03531	ko04112,map04112	-	-	-	ko00000,ko00001,ko02048,ko03036,ko04812	-	-	-	FtsZ_C,Tubulin
DYD3_k127_2841011_1	862908.BMS_0068	1.063e-178	567.0	COG0849@1|root,COG0849@2|Bacteria,1MUSR@1224|Proteobacteria,42MS2@68525|delta/epsilon subdivisions,2MSPD@213481|Bdellovibrionales,2WIQ0@28221|Deltaproteobacteria	213481|Bdellovibrionales	D	Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring	ftsA	-	-	ko:K03590	ko04112,map04112	-	-	-	ko00000,ko00001,ko03036,ko04812	-	-	-	FtsA,SHS2_FTSA
DYD3_k127_2841011_6	1201288.M900_0142	2.277e-84	289.0	COG0812@1|root,COG0812@2|Bacteria,1MXDH@1224|Proteobacteria,42P86@68525|delta/epsilon subdivisions,2MTEY@213481|Bdellovibrionales,2WN8T@28221|Deltaproteobacteria	213481|Bdellovibrionales	M	Cell wall formation	murB	-	1.3.1.98	ko:K00075	ko00520,ko00550,ko01100,map00520,map00550,map01100	-	R03191,R03192	RC02639	ko00000,ko00001,ko01000,ko01011	-	-	-	FAD_binding_4,MurB_C
DYD3_k127_2841011_4	1201288.M900_0141	9.717e-152	492.0	COG0773@1|root,COG0773@2|Bacteria,1MV68@1224|Proteobacteria,42MMP@68525|delta/epsilon subdivisions,2MSV8@213481|Bdellovibrionales,2WK50@28221|Deltaproteobacteria	213481|Bdellovibrionales	M	Belongs to the MurCDEF family	murC	-	6.3.2.8	ko:K01924	ko00471,ko00550,ko01100,map00471,map00550,map01100	-	R03193	RC00064,RC00141	ko00000,ko00001,ko01000,ko01011	-	-	-	Mur_ligase,Mur_ligase_C,Mur_ligase_M
DYD3_k127_2841011_8	318161.Sden_0355	4.79e-46	179.0	COG0707@1|root,COG0707@2|Bacteria,1MVIB@1224|Proteobacteria,1RMQ3@1236|Gammaproteobacteria,2QAIN@267890|Shewanellaceae	1236|Gammaproteobacteria	M	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)	murG	GO:0000270,GO:0003674,GO:0003824,GO:0006022,GO:0006023,GO:0006024,GO:0006807,GO:0008150,GO:0008152,GO:0008194,GO:0008375,GO:0009058,GO:0009059,GO:0009252,GO:0009273,GO:0009987,GO:0016740,GO:0016757,GO:0016758,GO:0030203,GO:0034645,GO:0042546,GO:0043170,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044249,GO:0044260,GO:0050511,GO:0070589,GO:0071554,GO:0071704,GO:0071840,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576	2.4.1.227	ko:K02563	ko00550,ko01100,ko01502,ko04112,map00550,map01100,map01502,map04112	-	R05032,R05662	RC00005,RC00049	ko00000,ko00001,ko01000,ko01011	-	GT28	iSFV_1184.SFV_0083,iSF_1195.SF0087,iSFxv_1172.SFxv_0091,iS_1188.S0089	Glyco_tran_28_C,Glyco_transf_28
DYD3_k127_2841011_5	862908.BMS_0064	7.842e-116	386.0	COG0772@1|root,COG0772@2|Bacteria,1MVDB@1224|Proteobacteria,42MG2@68525|delta/epsilon subdivisions,2MSYY@213481|Bdellovibrionales,2WJ01@28221|Deltaproteobacteria	213481|Bdellovibrionales	D	Belongs to the SEDS family	ftsW	-	-	ko:K03588	ko04112,map04112	-	-	-	ko00000,ko00001,ko02000,ko03036	2.A.103.1	-	-	FTSW_RODA_SPOVE
DYD3_k127_2841011_0	1353529.M899_0074	5.227e-201	634.0	COG0771@1|root,COG0771@2|Bacteria,1MVYD@1224|Proteobacteria,42MJY@68525|delta/epsilon subdivisions,2MSNT@213481|Bdellovibrionales,2WJAQ@28221|Deltaproteobacteria	213481|Bdellovibrionales	M	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)	murD	-	6.3.2.9	ko:K01925	ko00471,ko00550,ko01100,map00471,map00550,map01100	-	R02783	RC00064,RC00141	ko00000,ko00001,ko01000,ko01011	-	-	-	AlaDh_PNT_C,FAD_binding_3,Mur_ligase_C,Mur_ligase_M,NAD_binding_8
DYD3_k127_2841011_2	862908.BMS_0062	4.135e-162	517.0	COG0472@1|root,COG0472@2|Bacteria,1MUTK@1224|Proteobacteria,42MCP@68525|delta/epsilon subdivisions,2MSMX@213481|Bdellovibrionales,2WJDS@28221|Deltaproteobacteria	213481|Bdellovibrionales	M	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan	mraY	-	2.7.8.13	ko:K01000	ko00550,ko01100,ko01502,map00550,map01100,map01502	-	R05629,R05630	RC00002,RC02753	ko00000,ko00001,ko01000,ko01011	9.B.146	-	iAF987.Gmet_0409	Glycos_transf_4,MraY_sig1
DYD3_k127_2841011_9	862908.BMS_0061	3.027e-44	170.0	COG0770@1|root,COG0770@2|Bacteria,1QTSF@1224|Proteobacteria,42MXF@68525|delta/epsilon subdivisions,2MSZD@213481|Bdellovibrionales,2WIJZ@28221|Deltaproteobacteria	213481|Bdellovibrionales	M	Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein	murF	-	6.3.2.10	ko:K01929	ko00300,ko00550,ko01100,ko01502,map00300,map00550,map01100,map01502	-	R04573,R04617	RC00064,RC00141	ko00000,ko00001,ko01000,ko01011	-	-	-	Mur_ligase,Mur_ligase_C,Mur_ligase_M
DYD3_k127_2849715_9	1353529.M899_1853	7.405e-48	188.0	COG1519@1|root,COG1519@2|Bacteria,1MU9F@1224|Proteobacteria,42PCH@68525|delta/epsilon subdivisions,2MTEB@213481|Bdellovibrionales,2WMQM@28221|Deltaproteobacteria	213481|Bdellovibrionales	M	PFAM Three-deoxy-D-manno-octulosonic-acid transferase	kdtA	-	2.4.99.12,2.4.99.13,2.4.99.14,2.4.99.15	ko:K02527	ko00540,ko01100,map00540,map01100	M00060,M00080	R04658,R05074,R09763	RC00009,RC00077,RC00247	ko00000,ko00001,ko00002,ko01000,ko01003,ko01005	-	GT30	-	Glycos_transf_N
DYD3_k127_2849715_14	264462.Bd2786	3.63e-20	93.0	COG1396@1|root,COG1396@2|Bacteria,1NJ2C@1224|Proteobacteria,43C96@68525|delta/epsilon subdivisions,2MUMJ@213481|Bdellovibrionales,2X7JN@28221|Deltaproteobacteria	1224|Proteobacteria	K	Helix-turn-helix domain	-	-	-	-	-	-	-	-	-	-	-	-	HTH_3,HTH_31
DYD3_k127_2849715_0	1201288.M900_A0437	3.18e-203	639.0	COG0183@1|root,COG0183@2|Bacteria,1MU5G@1224|Proteobacteria,42MSR@68525|delta/epsilon subdivisions,2MSMB@213481|Bdellovibrionales,2WM0B@28221|Deltaproteobacteria	213481|Bdellovibrionales	I	Belongs to the thiolase family	-	-	2.3.1.16,2.3.1.9	ko:K00626,ko:K00632	ko00071,ko00072,ko00280,ko00281,ko00310,ko00362,ko00380,ko00592,ko00620,ko00630,ko00640,ko00642,ko00650,ko00720,ko00900,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,ko02020,map00071,map00072,map00280,map00281,map00310,map00362,map00380,map00592,map00620,map00630,map00640,map00642,map00650,map00720,map00900,map01100,map01110,map01120,map01130,map01200,map01212,map02020	M00087,M00088,M00095,M00113,M00373,M00374,M00375	R00238,R00829,R00927,R01177,R03778,R03858,R03991,R04546,R04742,R04747,R05506,R05586,R07891,R07895,R07899,R08091,R08095	RC00004,RC00326,RC00405,RC01702,RC02728,RC02898,RC02955	ko00000,ko00001,ko00002,ko01000,ko04147	-	-	-	Thiolase_C,Thiolase_N
DYD3_k127_2849715_2	1278307.KB906973_gene1275	6.479e-149	496.0	COG1024@1|root,COG1250@1|root,COG1024@2|Bacteria,COG1250@2|Bacteria,1MU9P@1224|Proteobacteria,1RMZ8@1236|Gammaproteobacteria,2QHU0@267894|Psychromonadaceae	1236|Gammaproteobacteria	I	3-hydroxyacyl-CoA dehydrogenase	fadB	GO:0003674,GO:0003824,GO:0003857,GO:0004165,GO:0004300,GO:0006082,GO:0006629,GO:0006631,GO:0006635,GO:0008150,GO:0008152,GO:0008692,GO:0009056,GO:0009062,GO:0009987,GO:0016042,GO:0016054,GO:0016491,GO:0016614,GO:0016616,GO:0016829,GO:0016835,GO:0016836,GO:0016853,GO:0016854,GO:0016856,GO:0016860,GO:0016863,GO:0019395,GO:0019752,GO:0030258,GO:0032787,GO:0034440,GO:0043436,GO:0044237,GO:0044238,GO:0044242,GO:0044248,GO:0044255,GO:0044281,GO:0044282,GO:0046395,GO:0055114,GO:0071704,GO:0072329,GO:1901575	1.1.1.35,4.2.1.17,5.1.2.3,5.3.3.8	ko:K01782,ko:K01825	ko00071,ko00280,ko00281,ko00310,ko00362,ko00380,ko00410,ko00640,ko00650,ko00903,ko00930,ko01040,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00071,map00280,map00281,map00310,map00362,map00380,map00410,map00640,map00650,map00903,map00930,map01040,map01100,map01110,map01120,map01130,map01200,map01212	M00032,M00087	R01975,R03026,R03045,R03276,R04137,R04170,R04203,R04204,R04224,R04737,R04738,R04739,R04740,R04741,R04744,R04745,R04746,R04748,R04749,R04756,R05066,R05305,R06411,R06412,R06941,R06942,R07935,R07951,R08093,R08094	RC00029,RC00099,RC00117,RC00241,RC00525,RC00831,RC00834,RC00896,RC01078,RC01086,RC01095,RC01098,RC01103,RC01217,RC02115	ko00000,ko00001,ko00002,ko01000	-	-	iLF82_1304.LF82_0614,iNRG857_1313.NRG857_19200	3HCDH,3HCDH_N,ECH_1
DYD3_k127_2849715_4	862908.BMS_1820	2.52e-81	284.0	COG4591@1|root,COG4591@2|Bacteria	2|Bacteria	M	lipoprotein localization to outer membrane	lolC	GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0008104,GO:0008150,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0032991,GO:0033036,GO:0034613,GO:0044425,GO:0044459,GO:0044464,GO:0044872,GO:0044873,GO:0044874,GO:0051179,GO:0051641,GO:0070727,GO:0071944,GO:0072657,GO:0089705,GO:0098796,GO:0098797,GO:1990778	-	ko:K02004,ko:K09808	ko02010,map02010	M00255,M00258	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1,3.A.1.125	-	-	FtsX,MacB_PCD
DYD3_k127_2849715_11	471854.Dfer_2797	1.023e-32	139.0	COG4974@1|root,COG4974@2|Bacteria,4NE0E@976|Bacteroidetes,47JU5@768503|Cytophagia	976|Bacteroidetes	D	Tyrosine recombinase XerC	xerC	-	-	ko:K04763	-	-	-	-	ko00000,ko03036	-	-	-	Phage_int_SAM_1,Phage_integrase
DYD3_k127_2849715_3	264462.Bd0545	6.404e-96	326.0	COG1322@1|root,COG1322@2|Bacteria,1MWHV@1224|Proteobacteria,42NDS@68525|delta/epsilon subdivisions,2MUR8@213481|Bdellovibrionales,2WJDE@28221|Deltaproteobacteria	213481|Bdellovibrionales	S	DNA recombination protein RmuC	-	-	-	ko:K09760	-	-	-	-	ko00000	-	-	-	RmuC
DYD3_k127_2849715_10	1121413.JMKT01000003_gene170	2.111e-37	147.0	COG0449@1|root,COG0449@2|Bacteria,1RGWX@1224|Proteobacteria,42TA9@68525|delta/epsilon subdivisions,2WPHJ@28221|Deltaproteobacteria	28221|Deltaproteobacteria	M	ORF6N domain	-	-	-	-	-	-	-	-	-	-	-	-	ORF6N
DYD3_k127_2849715_7	862908.BMS_1010	1.585e-62	225.0	COG0726@1|root,COG0726@2|Bacteria	2|Bacteria	G	polysaccharide deacetylase	-	-	3.5.1.104	ko:K22278	-	-	-	-	ko00000,ko01000	-	-	-	Polysacc_deac_1
DYD3_k127_2849715_6	1201290.M902_0544	3.08e-63	231.0	COG3591@1|root,COG3591@2|Bacteria	2|Bacteria	E	Belongs to the peptidase S1B family	-	-	-	-	-	-	-	-	-	-	-	-	PAN_4,Trypsin,Trypsin_2,WSC
DYD3_k127_2849715_1	1280944.HY17_17585	7.501e-186	607.0	COG2183@1|root,COG2183@2|Bacteria,1MUA7@1224|Proteobacteria,2TTSC@28211|Alphaproteobacteria,43Z2G@69657|Hyphomonadaceae	28211|Alphaproteobacteria	K	S1 RNA-binding domain-containing protein	tex	GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0009314,GO:0009628,GO:0010212,GO:0044424,GO:0044444,GO:0044464,GO:0050896	-	ko:K06959	-	-	-	-	ko00000	-	-	-	HHH_3,S1,Tex_N,Tex_YqgF
DYD3_k127_2849715_13	1353529.M899_1834	1.589e-30	133.0	COG0665@1|root,COG0665@2|Bacteria	2|Bacteria	E	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity	-	-	1.5.99.6	ko:K00316	ko00330,ko00410,ko01100,map00330,map00410,map01100	-	R01914,R01915	RC00053,RC00225	ko00000,ko00001,ko01000	-	-	-	DAO,FAD_oxidored,NAD_binding_8
DYD3_k127_2849715_16	1033733.CAEK01000001_gene226	2.894e-15	85.0	COG2039@1|root,COG2039@2|Bacteria,1TRRX@1239|Firmicutes,248T4@186801|Clostridia,22GM9@1570339|Peptoniphilaceae	186801|Clostridia	O	Removes 5-oxoproline from various penultimate amino acid residues except L-proline	pcp	-	3.4.19.3	ko:K01304	-	-	-	-	ko00000,ko01000,ko01002	-	-	-	Peptidase_C15
DYD3_k127_2849715_5	675814.VIC_001630	1.032e-67	251.0	COG2755@1|root,COG2755@2|Bacteria	2|Bacteria	E	lipolytic protein G-D-S-L family	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_2870880_3	1173022.Cri9333_2244	2.466e-46	175.0	COG4638@1|root,COG4638@2|Bacteria,1G2UQ@1117|Cyanobacteria,1H8G2@1150|Oscillatoriales	1117|Cyanobacteria	P	PFAM Rieske 2Fe-2S domain	hcaE	-	-	ko:K19982	ko00404,ko01130,map00404,map01130	M00790	R11107	RC01333	ko00000,ko00001,ko00002,ko01000	-	-	-	PaO,Rieske
DYD3_k127_2870880_4	1201288.M900_A0074	4.387e-37	148.0	COG3770@1|root,COG3770@2|Bacteria,1MU9I@1224|Proteobacteria,42VK7@68525|delta/epsilon subdivisions,2MTC5@213481|Bdellovibrionales,2WS1M@28221|Deltaproteobacteria	213481|Bdellovibrionales	M	LysM domain protein	mepA	-	-	ko:K07261	-	-	-	-	ko00000,ko01000,ko01002,ko01011	-	-	-	LysM,Peptidase_M74
DYD3_k127_2870880_5	1336233.JAEH01000032_gene501	1.578e-24	105.0	COG3000@1|root,COG3000@2|Bacteria,1NR7X@1224|Proteobacteria,1RQDX@1236|Gammaproteobacteria,2Q9W4@267890|Shewanellaceae	1236|Gammaproteobacteria	I	Fatty acid hydroxylase superfamily	-	-	-	-	-	-	-	-	-	-	-	-	FA_hydroxylase
DYD3_k127_2870880_0	1408226.T233_01581	5.116e-143	465.0	COG0172@1|root,COG0172@2|Bacteria,1TP4W@1239|Firmicutes,4H9Y4@91061|Bacilli,4B003@81852|Enterococcaceae	91061|Bacilli	J	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)	serS	-	6.1.1.11	ko:K01875	ko00970,map00970	M00359,M00360	R03662,R08218	RC00055,RC00523	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	-	-	-	Seryl_tRNA_N,tRNA-synt_2b
DYD3_k127_2870880_2	862908.BMS_0038	7.234e-97	337.0	COG0457@1|root,COG3071@1|root,COG0457@2|Bacteria,COG3071@2|Bacteria,1PEH7@1224|Proteobacteria,42TVC@68525|delta/epsilon subdivisions,2MT8Z@213481|Bdellovibrionales,2WSUQ@28221|Deltaproteobacteria	213481|Bdellovibrionales	H	Tetratricopeptide repeat	-	-	-	-	-	-	-	-	-	-	-	-	TPR_16,TPR_19,TPR_2,TPR_8
DYD3_k127_2895903_1	1109445.AGSX01000009_gene2057	2.316e-111	367.0	COG1801@1|root,COG1801@2|Bacteria,1MU7F@1224|Proteobacteria,1RYRW@1236|Gammaproteobacteria,1Z0MB@136846|Pseudomonas stutzeri group	1236|Gammaproteobacteria	S	Protein of unknown function DUF72	-	-	-	-	-	-	-	-	-	-	-	-	DUF72
DYD3_k127_2895903_5	640510.BC1001_5816	1.032e-47	182.0	COG4221@1|root,COG4221@2|Bacteria,1MUU6@1224|Proteobacteria,2VM6H@28216|Betaproteobacteria,1K0XE@119060|Burkholderiaceae	28216|Betaproteobacteria	S	Belongs to the short-chain dehydrogenases reductases (SDR) family	-	-	-	-	-	-	-	-	-	-	-	-	adh_short
DYD3_k127_2895903_0	670292.JH26_24305	6.866e-131	427.0	COG0655@1|root,COG0655@2|Bacteria,1MX6A@1224|Proteobacteria,2TU75@28211|Alphaproteobacteria,1JUA9@119045|Methylobacteriaceae	28211|Alphaproteobacteria	S	NADPH-dependent FMN reductase	-	-	-	-	-	-	-	-	-	-	-	-	FMN_red
DYD3_k127_2895903_7	260799.BAS0687	1.232e-19	93.0	COG2905@1|root,COG2905@2|Bacteria,1VW3X@1239|Firmicutes,4HJ81@91061|Bacilli,1ZH6S@1386|Bacillus	91061|Bacilli	T	COG0517 FOG CBS domain	ylbB	-	-	-	-	-	-	-	-	-	-	-	CBS
DYD3_k127_2895903_14	1218103.CIN01S_07_03920	2.041e-06	51.0	2EHXM@1|root,33BP4@2|Bacteria,4PGND@976|Bacteroidetes,1IHFD@117743|Flavobacteriia,3ZU54@59732|Chryseobacterium	976|Bacteroidetes	S	Protein of unknown function (DUF3606)	-	-	-	-	-	-	-	-	-	-	-	-	DUF3606
DYD3_k127_2895903_8	1201288.M900_1022	1.343e-19	90.0	COG2501@1|root,COG2501@2|Bacteria,1N7NW@1224|Proteobacteria,42W9B@68525|delta/epsilon subdivisions,2WS2I@28221|Deltaproteobacteria	28221|Deltaproteobacteria	S	S4 domain	-	-	-	ko:K14761	-	-	-	-	ko00000,ko03009	-	-	-	S4_2
DYD3_k127_2895903_4	215803.DB30_2240	4.852e-64	238.0	COG0642@1|root,COG2205@2|Bacteria,1QUJ7@1224|Proteobacteria,43BJF@68525|delta/epsilon subdivisions	1224|Proteobacteria	T	Histidine kinase	-	-	2.7.13.3	ko:K07636	ko02020,map02020	M00434	-	-	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	-	-	-	GAF_2,HAMP,HATPase_c,HisKA,Response_reg,sCache_like
DYD3_k127_2895903_6	1123229.AUBC01000024_gene4560	2.096e-37	158.0	COG3300@1|root,COG4191@1|root,COG3300@2|Bacteria,COG4191@2|Bacteria,1RCM9@1224|Proteobacteria,2TQQ9@28211|Alphaproteobacteria,3JR0R@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	T	Response regulator receiver	-	-	-	-	-	-	-	-	-	-	-	-	HATPase_c,HisKA,MASE1,MHYT,PAS,PAS_4,PAS_9,Response_reg
DYD3_k127_2895903_2	163908.KB235896_gene4632	2.022e-89	304.0	COG0491@1|root,COG1141@1|root,COG0491@2|Bacteria,COG1141@2|Bacteria,1G3D1@1117|Cyanobacteria,1HKI6@1161|Nostocales	1117|Cyanobacteria	C	4Fe-4S single cluster domain of Ferredoxin I	-	-	-	-	-	-	-	-	-	-	-	-	Fer4_13
DYD3_k127_2895903_3	614083.AWQR01000003_gene2923	1.287e-65	237.0	COG1408@1|root,COG1408@2|Bacteria,1MUH5@1224|Proteobacteria,2VH7E@28216|Betaproteobacteria,4AA4X@80864|Comamonadaceae	28216|Betaproteobacteria	S	PFAM metallophosphoesterase	-	-	-	ko:K07098	-	-	-	-	ko00000	-	-	-	Metallophos
DYD3_k127_2895903_13	1304275.C41B8_12539	4.642e-08	60.0	COG5592@1|root,COG5592@2|Bacteria,1RGUY@1224|Proteobacteria,1S5V6@1236|Gammaproteobacteria	1236|Gammaproteobacteria	S	Hemerythrin hhe cation binding	-	-	-	-	-	-	-	-	-	-	-	-	Hemerythrin
DYD3_k127_2895903_9	215803.DB30_2334	2.923e-19	92.0	COG0745@1|root,COG0745@2|Bacteria,1NBDV@1224|Proteobacteria,42UVC@68525|delta/epsilon subdivisions,2WQ45@28221|Deltaproteobacteria,2Z1KX@29|Myxococcales	28221|Deltaproteobacteria	T	cheY-homologous receiver domain	-	-	-	-	-	-	-	-	-	-	-	-	Response_reg
DYD3_k127_2895903_11	981327.F925_01959	2.971e-15	76.0	COG0652@1|root,COG0652@2|Bacteria,1R9ZQ@1224|Proteobacteria,1S222@1236|Gammaproteobacteria,3NKAW@468|Moraxellaceae	1236|Gammaproteobacteria	G	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides	ppiB	GO:0000413,GO:0003674,GO:0003755,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016853,GO:0016859,GO:0018193,GO:0018208,GO:0019538,GO:0036211,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:0140096,GO:1901564	5.2.1.8	ko:K03768	-	-	-	-	ko00000,ko01000,ko03110	-	-	-	Pro_isomerase
DYD3_k127_2909137_0	1201290.M902_1367	7.391e-227	715.0	COG2804@1|root,COG2804@2|Bacteria,1MU7V@1224|Proteobacteria,42M51@68525|delta/epsilon subdivisions,2MSSU@213481|Bdellovibrionales,2WIPP@28221|Deltaproteobacteria	213481|Bdellovibrionales	NU	PFAM Type II secretion system protein E	pilB	-	-	ko:K02652	-	-	-	-	ko00000,ko02035,ko02044	3.A.15.2	-	-	T2SSE,T2SSE_N,cNMP_binding
DYD3_k127_2909137_2	862908.BMS_0120	8.789e-167	531.0	COG2805@1|root,COG2805@2|Bacteria,1MU3J@1224|Proteobacteria,42M7F@68525|delta/epsilon subdivisions,2MSP9@213481|Bdellovibrionales,2WIMF@28221|Deltaproteobacteria	213481|Bdellovibrionales	NU	twitching motility protein	pilT-4	-	-	ko:K02669	-	-	-	-	ko00000,ko02035,ko02044	3.A.15.2	-	-	T2SSE
DYD3_k127_2909137_3	1353529.M899_0128	4.494e-143	464.0	COG1459@1|root,COG1459@2|Bacteria,1MV4U@1224|Proteobacteria,42NES@68525|delta/epsilon subdivisions,2MSWH@213481|Bdellovibrionales,2WJ0V@28221|Deltaproteobacteria	213481|Bdellovibrionales	NU	Type II secretion system	pilC	-	-	ko:K02653	-	-	-	-	ko00000,ko02035,ko02044	3.A.15.2	-	-	T2SSF
DYD3_k127_2909137_12	862908.BMS_0122	4.112e-27	118.0	COG4968@1|root,COG4968@2|Bacteria,1QXV9@1224|Proteobacteria,42VR9@68525|delta/epsilon subdivisions,2MT99@213481|Bdellovibrionales,2WRJV@28221|Deltaproteobacteria	213481|Bdellovibrionales	NU	Pfam:N_methyl_2	pilA	GO:0005575,GO:0005623,GO:0009289,GO:0042995,GO:0044464	-	ko:K02650	ko02020,map02020	-	-	-	ko00000,ko00001,ko02035,ko02044	3.A.15.2	-	-	N_methyl,Pilin_PilA
DYD3_k127_2909137_8	862908.BMS_0123	1.503e-51	193.0	COG0457@1|root,COG0457@2|Bacteria,1NMQD@1224|Proteobacteria,42XCX@68525|delta/epsilon subdivisions,2MTFP@213481|Bdellovibrionales,2WSK3@28221|Deltaproteobacteria	213481|Bdellovibrionales	S	Tetratricopeptide repeat	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_2909137_5	1353529.M899_0131	1.003e-82	285.0	COG1131@1|root,COG1131@2|Bacteria,1MUX3@1224|Proteobacteria,42NSM@68525|delta/epsilon subdivisions,2MT0R@213481|Bdellovibrionales,2WJXQ@28221|Deltaproteobacteria	213481|Bdellovibrionales	V	ABC transporter	-	-	-	ko:K01990	-	M00254	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	ABC_tran
DYD3_k127_2909137_7	862908.BMS_0125	8.889e-52	193.0	COG1277@1|root,COG1277@2|Bacteria,1NCXV@1224|Proteobacteria,42VK2@68525|delta/epsilon subdivisions,2MT92@213481|Bdellovibrionales,2WRNT@28221|Deltaproteobacteria	213481|Bdellovibrionales	S	ABC-type transport system involved in multi-copper enzyme maturation, permease component	-	-	-	-	-	-	-	-	-	-	-	-	ABC2_membrane_2
DYD3_k127_2909137_6	1201290.M902_1360	2.398e-77	266.0	COG1989@1|root,COG1989@2|Bacteria,1MUZF@1224|Proteobacteria,42S2A@68525|delta/epsilon subdivisions,2MT3G@213481|Bdellovibrionales,2WMQ8@28221|Deltaproteobacteria	213481|Bdellovibrionales	NOU	Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue	pilD	-	3.4.23.43	ko:K02654	-	M00331	-	-	ko00000,ko00002,ko01000,ko01002,ko02035,ko02044	3.A.15.2	-	-	DiS_P_DiS,Peptidase_A24
DYD3_k127_2909137_4	862908.BMS_0127	1.731e-93	319.0	COG4972@1|root,COG4972@2|Bacteria,1MX8P@1224|Proteobacteria,42M36@68525|delta/epsilon subdivisions,2MT2A@213481|Bdellovibrionales,2WJFJ@28221|Deltaproteobacteria	213481|Bdellovibrionales	NU	TIGRFAM type IV pilus assembly protein PilM	pilM	-	-	ko:K02662	-	-	-	-	ko00000,ko02035,ko02044	-	-	-	PilM_2
DYD3_k127_2909137_1	1353529.M899_0138	2.217e-189	609.0	COG4796@1|root,COG4796@2|Bacteria,1QTT6@1224|Proteobacteria,42MKN@68525|delta/epsilon subdivisions,2MSX9@213481|Bdellovibrionales,2WJV6@28221|Deltaproteobacteria	213481|Bdellovibrionales	U	Type II and III secretion system protein	pilQ	-	-	ko:K02666	-	-	-	-	ko00000,ko02035,ko02044	3.A.15.2	-	-	AMIN,STN,Secretin,Secretin_N
DYD3_k127_2909137_9	1353529.M899_0139	8.833e-44	163.0	COG0457@1|root,COG0457@2|Bacteria,1NEMW@1224|Proteobacteria,42WBX@68525|delta/epsilon subdivisions,2MTCS@213481|Bdellovibrionales,2WRAD@28221|Deltaproteobacteria	213481|Bdellovibrionales	NU	Tetratricopeptide repeat	-	-	-	-	-	-	-	-	-	-	-	-	TPR_14,TPR_16,TPR_19,TPR_8
DYD3_k127_2942521_0	862908.BMS_3201	3.263e-90	313.0	COG2204@1|root,COG2204@2|Bacteria,1MU0N@1224|Proteobacteria,42M03@68525|delta/epsilon subdivisions,2WIT0@28221|Deltaproteobacteria	28221|Deltaproteobacteria	T	two component, sigma54 specific, transcriptional regulator, Fis family	-	-	-	-	-	-	-	-	-	-	-	-	FHA,HTH_8,Response_reg,Sigma54_activat
DYD3_k127_2942521_1	264462.Bd2653	9.127e-56	203.0	COG0775@1|root,COG0775@2|Bacteria,1MY5S@1224|Proteobacteria,42MBG@68525|delta/epsilon subdivisions,2WSEX@28221|Deltaproteobacteria	28221|Deltaproteobacteria	F	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively	-	-	3.2.2.9	ko:K01243	ko00270,ko01100,ko01230,map00270,map01100,map01230	M00034,M00609	R00194,R01401	RC00063,RC00318	ko00000,ko00001,ko00002,ko01000	-	-	-	PNP_UDP_1
DYD3_k127_2942521_2	1124982.MSI_05080	2.077e-14	85.0	COG0683@1|root,COG0683@2|Bacteria,2J77G@203691|Spirochaetes	203691|Spirochaetes	E	Receptor family ligand binding region	-	-	-	ko:K01999	ko02010,ko02024,map02010,map02024	M00237	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.4	-	-	Peripla_BP_6
DYD3_k127_296906_0	862908.BMS_0111	5.942e-100	329.0	COG0714@1|root,COG0714@2|Bacteria,1MUFN@1224|Proteobacteria,42NCX@68525|delta/epsilon subdivisions,2MSQ0@213481|Bdellovibrionales,2WJUZ@28221|Deltaproteobacteria	213481|Bdellovibrionales	S	ATPase associated with various cellular activities	-	-	-	ko:K03924	-	-	-	-	ko00000,ko01000	-	-	-	AAA_3
DYD3_k127_296906_1	1201288.M900_0179	1.281e-96	329.0	COG1092@1|root,COG1092@2|Bacteria,1MUGB@1224|Proteobacteria,42M7K@68525|delta/epsilon subdivisions,2MTSJ@213481|Bdellovibrionales,2WKKM@28221|Deltaproteobacteria	213481|Bdellovibrionales	J	S-adenosylmethionine-dependent methyltransferase	-	-	2.1.1.191	ko:K06969	-	-	-	-	ko00000,ko01000,ko03009	-	-	-	Methyltrans_SAM,Methyltransf_25
DYD3_k127_296906_2	1201288.M900_0177	3.684e-65	240.0	COG1293@1|root,COG1293@2|Bacteria	2|Bacteria	K	actin binding	FbpA	-	-	-	-	-	-	-	-	-	-	-	DUF814,FbpA,ThiI
DYD3_k127_296906_4	1121351.AUAP01000017_gene1313	1.306e-05	57.0	COG1562@1|root,COG1562@2|Bacteria,1N6J2@1224|Proteobacteria,2VIZC@28216|Betaproteobacteria,2KQEW@206351|Neisseriales	206351|Neisseriales	I	squalene synthase HpnC	hpnC	-	-	-	-	-	-	-	-	-	-	-	SQS_PSY
DYD3_k127_2972173_11	745310.G432_03760	1.617e-24	116.0	COG2885@1|root,COG2885@2|Bacteria,1R5IS@1224|Proteobacteria,2U2V8@28211|Alphaproteobacteria,2K1H8@204457|Sphingomonadales	204457|Sphingomonadales	M	Belongs to the ompA family	-	-	-	-	-	-	-	-	-	-	-	-	OmpA
DYD3_k127_2972173_1	1123508.JH636439_gene1756	4.208e-197	625.0	COG5361@1|root,COG5361@2|Bacteria,2IYY0@203682|Planctomycetes	203682|Planctomycetes	S	Protein of unknown function (DUF1214)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1214,DUF1254
DYD3_k127_2972173_2	1134912.AJTV01000013_gene609	1.703e-141	463.0	COG5361@1|root,COG5361@2|Bacteria,1MWTW@1224|Proteobacteria,2TUR1@28211|Alphaproteobacteria	28211|Alphaproteobacteria	S	Protein of unknown function (DUF1254)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1214,DUF1254
DYD3_k127_2972173_9	1110502.TMO_1568	1.086e-41	158.0	COG1846@1|root,COG1846@2|Bacteria,1RH1F@1224|Proteobacteria,2U9GN@28211|Alphaproteobacteria,2JSY6@204441|Rhodospirillales	204441|Rhodospirillales	K	helix_turn_helix multiple antibiotic resistance protein	-	-	-	-	-	-	-	-	-	-	-	-	MarR
DYD3_k127_2972173_7	929703.KE386492_gene4295	7.261e-53	190.0	COG1764@1|root,COG1764@2|Bacteria,4NNVC@976|Bacteroidetes,47QWH@768503|Cytophagia	976|Bacteroidetes	O	OsmC-like protein	-	-	-	-	-	-	-	-	-	-	-	-	OsmC
DYD3_k127_2972173_13	1122164.JHWF01000020_gene1493	7.069e-17	87.0	COG5592@1|root,COG5592@2|Bacteria,1QSVQ@1224|Proteobacteria,1RWGC@1236|Gammaproteobacteria,1JGGV@118969|Legionellales	2|Bacteria	S	Hemerythrin HHE cation binding domain	-	-	-	-	-	-	-	-	-	-	-	-	Hemerythrin
DYD3_k127_2972173_4	1184267.A11Q_294	7.192e-100	334.0	COG0583@1|root,COG0583@2|Bacteria,1MW16@1224|Proteobacteria,43EZZ@68525|delta/epsilon subdivisions,2MTVE@213481|Bdellovibrionales,2X2T2@28221|Deltaproteobacteria	213481|Bdellovibrionales	K	LysR substrate binding domain	-	-	-	-	-	-	-	-	-	-	-	-	HTH_1,LysR_substrate
DYD3_k127_2972173_3	1122137.AQXF01000001_gene2556	5.338e-109	356.0	COG1335@1|root,COG1335@2|Bacteria,1MU5N@1224|Proteobacteria,2TU4C@28211|Alphaproteobacteria	28211|Alphaproteobacteria	Q	isochorismatase	-	-	-	-	-	-	-	-	-	-	-	-	Isochorismatase
DYD3_k127_2972173_0	883126.HMPREF9710_04813	5.625e-198	634.0	COG1574@1|root,COG1574@2|Bacteria,1MWP2@1224|Proteobacteria,2VIK2@28216|Betaproteobacteria,473ZR@75682|Oxalobacteraceae	28216|Betaproteobacteria	S	Amidohydrolase family	-	-	-	-	-	-	-	-	-	-	-	-	Amidohydro_3
DYD3_k127_2972173_14	1408445.JHXP01000012_gene2360	1.907e-15	80.0	COG3245@1|root,COG3245@2|Bacteria,1MZBZ@1224|Proteobacteria,1S9Z9@1236|Gammaproteobacteria,1JEVA@118969|Legionellales	118969|Legionellales	C	Cytochrome C oxidase, cbb3-type, subunit III	cycB	-	-	-	-	-	-	-	-	-	-	-	Cytochrome_CBB3
DYD3_k127_2972173_5	290397.Adeh_1623	6.989e-59	218.0	COG0642@1|root,COG3284@1|root,COG2205@2|Bacteria,COG3284@2|Bacteria,1NRP8@1224|Proteobacteria,43E87@68525|delta/epsilon subdivisions,2X7N1@28221|Deltaproteobacteria	28221|Deltaproteobacteria	T	His Kinase A (phosphoacceptor) domain	-	-	-	-	-	-	-	-	-	-	-	-	HATPase_c,HisKA,PAS
DYD3_k127_2972173_8	1201290.M902_0585	3.324e-49	193.0	COG4191@1|root,COG4191@2|Bacteria,1RCM9@1224|Proteobacteria,42NFY@68525|delta/epsilon subdivisions,2MUNW@213481|Bdellovibrionales,2WJKV@28221|Deltaproteobacteria	213481|Bdellovibrionales	T	PFAM ATP-binding region, ATPase domain protein	-	-	-	-	-	-	-	-	-	-	-	-	CHASE5,HATPase_c,HisKA
DYD3_k127_2972173_15	1123277.KB893228_gene2108	1.542e-13	72.0	COG1028@1|root,COG1028@2|Bacteria,4NGQY@976|Bacteroidetes,47JWP@768503|Cytophagia	976|Bacteroidetes	IQ	KR domain	-	-	1.1.1.53	ko:K00038	ko00140,ko01100,map00140,map01100	-	R04831,R04834,R04844,R04847	RC00139,RC01219,RC01220	ko00000,ko00001,ko01000	-	-	-	adh_short_C2
DYD3_k127_2972173_12	1038860.AXAP01000001_gene6576	6.931e-19	94.0	COG2197@1|root,COG2197@2|Bacteria,1R9GN@1224|Proteobacteria,2VETM@28211|Alphaproteobacteria,3JW56@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	T	helix_turn_helix, Lux Regulon	mctR	-	-	ko:K07684	ko02020,map02020	M00471	-	-	ko00000,ko00001,ko00002,ko02022	-	-	-	GerE,Response_reg
DYD3_k127_2972173_6	264462.Bd2838	2.495e-58	217.0	COG5002@1|root,COG5002@2|Bacteria	2|Bacteria	T	protein histidine kinase activity	-	-	-	ko:K03281	-	-	-	-	ko00000	2.A.49	-	-	HATPase_c,HisKA,HisKA_7TM,Response_reg,SSF
DYD3_k127_2972266_0	1353529.M899_2262	1.34e-283	938.0	COG0689@1|root,COG2982@1|root,COG5184@1|root,COG0689@2|Bacteria,COG2982@2|Bacteria,COG5184@2|Bacteria	2|Bacteria	DZ	guanyl-nucleotide exchange factor activity	-	-	3.2.1.1,3.2.1.4	ko:K01176,ko:K01179,ko:K20276,ko:K21429	ko00500,ko01100,ko02024,ko04973,map00500,map01100,map02024,map04973	-	R02108,R02112,R06200,R11262,R11307,R11308	-	ko00000,ko00001,ko01000,ko01002	-	GH13,GH5,GH9	-	Cadherin_3,DUF4347,He_PIG,HemolysinCabind
DYD3_k127_2972266_1	264462.Bd3478	4.552e-181	582.0	COG0405@1|root,COG0405@2|Bacteria,1MUV6@1224|Proteobacteria,42NY8@68525|delta/epsilon subdivisions,2MTH4@213481|Bdellovibrionales,2WJNT@28221|Deltaproteobacteria	213481|Bdellovibrionales	E	gamma-glutamyltransferase	ggt	-	2.3.2.2,3.4.19.13	ko:K00681	ko00430,ko00460,ko00480,ko01100,map00430,map00460,map00480,map01100	-	R00494,R01262,R01687,R03867,R03916,R03970,R03971,R04935	RC00064,RC00090,RC00096	ko00000,ko00001,ko01000,ko01002	-	-	-	G_glu_transpept
DYD3_k127_2972266_6	862908.BMS_1625	8.333e-28	119.0	COG2154@1|root,COG2154@2|Bacteria,1RH99@1224|Proteobacteria,42U1P@68525|delta/epsilon subdivisions,2WQF3@28221|Deltaproteobacteria	28221|Deltaproteobacteria	H	Pterin 4 alpha carbinolamine dehydratase	phhB	-	4.2.1.96	ko:K01724	ko00790,map00790	-	R04734	RC01208	ko00000,ko00001,ko01000,ko04147	-	-	-	Pterin_4a
DYD3_k127_2972266_5	572477.Alvin_0462	7.624e-41	158.0	COG4067@1|root,COG4067@2|Bacteria,1RGX8@1224|Proteobacteria,1S5YR@1236|Gammaproteobacteria,1WYD4@135613|Chromatiales	135613|Chromatiales	O	Putative ATP-dependant zinc protease	-	-	-	-	-	-	-	-	-	-	-	-	Zn_protease
DYD3_k127_2972266_3	1201288.M900_1892	4.88e-86	305.0	COG0741@1|root,COG1388@1|root,COG0741@2|Bacteria,COG1388@2|Bacteria,1MWKE@1224|Proteobacteria,42ZHA@68525|delta/epsilon subdivisions,2MUP5@213481|Bdellovibrionales,2WV37@28221|Deltaproteobacteria	213481|Bdellovibrionales	M	Lysin motif	-	-	-	ko:K08307	-	-	-	-	ko00000,ko01000,ko01011	-	-	-	LysM,SLT
DYD3_k127_2972266_4	1250006.JHZZ01000001_gene650	6.525e-46	179.0	COG3568@1|root,COG3568@2|Bacteria,4NPTN@976|Bacteroidetes,1IG4Y@117743|Flavobacteriia,3VVDU@52959|Polaribacter	976|Bacteroidetes	S	Endonuclease/Exonuclease/phosphatase family	-	-	-	-	-	-	-	-	-	-	-	-	Exo_endo_phos
DYD3_k127_2972266_2	344747.PM8797T_31760	2.839e-120	396.0	COG0044@1|root,COG0044@2|Bacteria,2IWWW@203682|Planctomycetes	203682|Planctomycetes	F	dihydroorotase	-	-	3.5.2.2,3.5.2.3,3.5.2.5	ko:K01464,ko:K01465,ko:K01466	ko00230,ko00240,ko00410,ko00770,ko00983,ko01100,ko01120,map00230,map00240,map00410,map00770,map00983,map01100,map01120	M00046,M00051,M00546	R01993,R02269,R02425,R03055,R08227	RC00632,RC00680	ko00000,ko00001,ko00002,ko01000,ko04147	-	-	-	Amidohydro_1
DYD3_k127_2985349_2	261292.Nit79A3_1095	0.0001542	50.0	COG0457@1|root,COG0457@2|Bacteria,1PW9H@1224|Proteobacteria,2WBUI@28216|Betaproteobacteria,373TY@32003|Nitrosomonadales	28216|Betaproteobacteria	S	TPR repeat	-	-	-	-	-	-	-	-	-	-	-	-	TPR_8
DYD3_k127_2985349_0	1201288.M900_A0244	2.586e-40	167.0	2C20F@1|root,32R9J@2|Bacteria,1RKQ3@1224|Proteobacteria,4305A@68525|delta/epsilon subdivisions,2MU1I@213481|Bdellovibrionales,2WVJD@28221|Deltaproteobacteria	213481|Bdellovibrionales	S	Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family	-	-	-	-	-	-	-	-	-	-	-	-	Peptidase_C92
DYD3_k127_2985349_1	1077285.AGDG01000039_gene4006	5.211e-21	95.0	COG2885@1|root,COG2885@2|Bacteria,4NI3U@976|Bacteroidetes,2FQF1@200643|Bacteroidia,4ASDD@815|Bacteroidaceae	976|Bacteroidetes	M	OmpA family	-	-	-	ko:K03286	-	-	-	-	ko00000,ko02000	1.B.6	-	-	OMP_b-brl_2,OmpA
DYD3_k127_2992164_10	1416760.AYMS01000064_gene1569	2.548e-12	76.0	COG1289@1|root,COG1289@2|Bacteria,4NG4J@976|Bacteroidetes,1HXYW@117743|Flavobacteriia,47HGN@76831|Myroides	976|Bacteroidetes	S	FUSC-like inner membrane protein yccS	yccS	-	-	-	-	-	-	-	-	-	-	-	FUSC-like,FUSC_2
DYD3_k127_2992164_5	1121904.ARBP01000006_gene4075	3.764e-46	178.0	COG0598@1|root,COG0598@2|Bacteria,4NG3C@976|Bacteroidetes,47MPJ@768503|Cytophagia	976|Bacteroidetes	P	CorA-like Mg2+ transporter protein	corA	-	-	ko:K03284	-	-	-	-	ko00000,ko02000	1.A.35.1,1.A.35.3	-	-	CorA
DYD3_k127_2992164_3	754476.Q7A_2793	1.753e-56	206.0	COG3568@1|root,COG3568@2|Bacteria,1MVN7@1224|Proteobacteria,1RNSP@1236|Gammaproteobacteria,46334@72273|Thiotrichales	72273|Thiotrichales	L	Endonuclease exonuclease phosphatase family	-	-	-	-	-	-	-	-	-	-	-	-	Exo_endo_phos
DYD3_k127_2992164_1	323848.Nmul_A1523	5.58e-75	272.0	COG0398@1|root,COG1502@1|root,COG0398@2|Bacteria,COG1502@2|Bacteria,1PF9K@1224|Proteobacteria,2WB7I@28216|Betaproteobacteria,373SE@32003|Nitrosomonadales	28216|Betaproteobacteria	I	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_2992164_6	743720.Psefu_2803	8.837e-46	179.0	COG0392@1|root,COG0392@2|Bacteria,1MXH9@1224|Proteobacteria,1RS5E@1236|Gammaproteobacteria,1YXHF@136845|Pseudomonas putida group	1236|Gammaproteobacteria	S	Lysylphosphatidylglycerol synthase TM region	ybhN	GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944	-	ko:K07027	-	-	-	-	ko00000,ko02000	4.D.2	-	-	LPG_synthase_TM
DYD3_k127_2992164_8	1116369.KB890024_gene758	1.583e-40	153.0	COG0346@1|root,COG0346@2|Bacteria,1RHQB@1224|Proteobacteria,2UDWR@28211|Alphaproteobacteria,43M24@69277|Phyllobacteriaceae	28211|Alphaproteobacteria	E	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily	-	-	-	-	-	-	-	-	-	-	-	-	Glyoxalase
DYD3_k127_2992164_2	1353529.M899_2444	9.401e-63	222.0	COG1418@1|root,COG1418@2|Bacteria,1RB2W@1224|Proteobacteria,42UMT@68525|delta/epsilon subdivisions,2MSZQ@213481|Bdellovibrionales,2WQD6@28221|Deltaproteobacteria	213481|Bdellovibrionales	S	Metal dependent phosphohydrolases with conserved 'HD' motif.	-	-	-	ko:K06950	-	-	-	-	ko00000	-	-	-	HD
DYD3_k127_2992164_4	224308.BSU29640	5.587e-47	173.0	COG1956@1|root,COG1956@2|Bacteria,1V6GQ@1239|Firmicutes,4HH7X@91061|Bacilli,1ZFMG@1386|Bacillus	91061|Bacilli	T	GAF domain-containing protein	ytsP	-	1.8.4.14	ko:K08968	ko00270,map00270	-	R02025	RC00639	ko00000,ko00001,ko01000	-	-	-	GAF_2
DYD3_k127_2992164_7	351160.RCIX178	1.308e-44	178.0	COG0477@1|root,arCOG00132@2157|Archaea,2XYHV@28890|Euryarchaeota	28890|Euryarchaeota	G	Major facilitator superfamily	-	-	-	-	-	-	-	-	-	-	-	-	MFS_1,Sugar_tr
DYD3_k127_2992164_0	1201288.M900_1232	6.147e-150	495.0	COG3055@1|root,COG3055@2|Bacteria,1NG6Z@1224|Proteobacteria,433H1@68525|delta/epsilon subdivisions,2WY6T@28221|Deltaproteobacteria	28221|Deltaproteobacteria	S	Kelch motif	-	-	-	-	-	-	-	-	-	-	-	-	Kelch_1
DYD3_k127_2992164_9	358681.BBR47_40160	5.957e-21	97.0	2E4QW@1|root,32ZJG@2|Bacteria,1VB67@1239|Firmicutes,4HN4X@91061|Bacilli,26ZAQ@186822|Paenibacillaceae	91061|Bacilli	S	Protein of unknown function (DUF3995)	M1-716	-	-	-	-	-	-	-	-	-	-	-	DUF3995
DYD3_k127_3006857_8	1353529.M899_2181	8.527e-79	271.0	COG0583@1|root,COG0583@2|Bacteria	2|Bacteria	K	DNA-binding transcription factor activity	-	-	-	-	-	-	-	-	-	-	-	-	HTH_1,LysR_substrate
DYD3_k127_3006857_5	1353529.M899_2183	3.031e-146	484.0	COG0457@1|root,COG0457@2|Bacteria	1353529.M899_2183|-	S	peptidyl-tyrosine sulfation	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_3006857_0	1353529.M899_2185	4.406e-255	798.0	COG1960@1|root,COG1960@2|Bacteria,1MUDR@1224|Proteobacteria,42RBW@68525|delta/epsilon subdivisions,2MUQK@213481|Bdellovibrionales,2X5G8@28221|Deltaproteobacteria	213481|Bdellovibrionales	C	Acyl-CoA dehydrogenase, C-terminal domain	-	-	-	-	-	-	-	-	-	-	-	-	Acyl-CoA_dh_1,Acyl-CoA_dh_M,Acyl-CoA_dh_N
DYD3_k127_3006857_13	862908.BMS_1271	6.352e-55	209.0	COG3031@1|root,COG3031@2|Bacteria,1NB50@1224|Proteobacteria,42WPG@68525|delta/epsilon subdivisions,2MT7H@213481|Bdellovibrionales,2WREX@28221|Deltaproteobacteria	213481|Bdellovibrionales	U	General secretion pathway protein C	gspC	-	-	ko:K02452	ko03070,ko05111,map03070,map05111	M00331	-	-	ko00000,ko00001,ko00002,ko02044	3.A.15	-	-	PDZ_2,T2SSC
DYD3_k127_3006857_1	862908.BMS_1270	2.454e-243	777.0	COG1450@1|root,COG1450@2|Bacteria,1MUUA@1224|Proteobacteria,42M9I@68525|delta/epsilon subdivisions,2MSR5@213481|Bdellovibrionales,2WK1H@28221|Deltaproteobacteria	213481|Bdellovibrionales	NU	Type II and III secretion system protein	gspD	-	-	ko:K02453	ko03070,ko05111,map03070,map05111	M00331	-	-	ko00000,ko00001,ko00002,ko02044	3.A.15	-	-	Secretin,Secretin_N
DYD3_k127_3006857_2	765869.BDW_05460	2.25e-174	563.0	COG2804@1|root,COG2804@2|Bacteria,1MU7V@1224|Proteobacteria,42M51@68525|delta/epsilon subdivisions,2MSNC@213481|Bdellovibrionales,2WIPP@28221|Deltaproteobacteria	213481|Bdellovibrionales	NU	PFAM Type II secretion system protein E	gspE	-	-	ko:K02454	ko03070,ko05111,map03070,map05111	M00331	-	-	ko00000,ko00001,ko00002,ko02044	3.A.15	-	-	T2SSE,T2SSE_N
DYD3_k127_3006857_3	862908.BMS_1268	8.431e-165	527.0	COG1459@1|root,COG1459@2|Bacteria,1MV4U@1224|Proteobacteria,42NES@68525|delta/epsilon subdivisions,2MSNB@213481|Bdellovibrionales,2WJ0V@28221|Deltaproteobacteria	213481|Bdellovibrionales	NU	Type II secretion system	gspF	-	-	ko:K02455,ko:K02653	ko03070,ko05111,map03070,map05111	M00331	-	-	ko00000,ko00001,ko00002,ko02035,ko02044	3.A.15,3.A.15.2	-	-	T2SSF
DYD3_k127_3006857_14	1353529.M899_2190	5.756e-51	184.0	COG2165@1|root,COG2165@2|Bacteria,1RDX2@1224|Proteobacteria,42SFB@68525|delta/epsilon subdivisions,2MTDX@213481|Bdellovibrionales,2WP3B@28221|Deltaproteobacteria	213481|Bdellovibrionales	U	general secretion pathway protein G	gspG	-	-	ko:K02456	ko03070,ko05111,map03070,map05111	M00331	-	-	ko00000,ko00001,ko00002,ko02044	3.A.15	-	-	N_methyl,T2SSG
DYD3_k127_3006857_18	862908.BMS_1265	4.979e-28	120.0	COG2165@1|root,COG2165@2|Bacteria	2|Bacteria	NU	general secretion pathway protein	lspI	-	-	ko:K02246,ko:K02456,ko:K02457,ko:K02458	ko03070,ko05111,map03070,map05111	M00331,M00429	-	-	ko00000,ko00001,ko00002,ko02044	3.A.15	-	-	N_methyl,T2SSI
DYD3_k127_3006857_12	1201290.M902_2798	8.829e-59	222.0	COG3156@1|root,COG3156@2|Bacteria,1RIW9@1224|Proteobacteria,42V6H@68525|delta/epsilon subdivisions,2MTFK@213481|Bdellovibrionales,2WRT7@28221|Deltaproteobacteria	213481|Bdellovibrionales	U	Type II secretion system (T2SS), protein K	gspK	-	-	ko:K02460	ko03070,ko05111,map03070,map05111	M00331	-	-	ko00000,ko00001,ko00002,ko02044	3.A.15	-	-	T2SSK
DYD3_k127_3006857_6	862908.BMS_1262	1.069e-96	335.0	COG4972@1|root,COG4972@2|Bacteria,1QR4D@1224|Proteobacteria,436SY@68525|delta/epsilon subdivisions,2MTAT@213481|Bdellovibrionales,2X1GD@28221|Deltaproteobacteria	213481|Bdellovibrionales	NU	type 4 fimbrial biogenesis protein PilM	-	-	-	ko:K02461	ko03070,ko05111,map03070,map05111	M00331	-	-	ko00000,ko00001,ko00002,ko02044	3.A.15	-	-	PilM_2
DYD3_k127_3006857_10	1353529.M899_2198	7.524e-62	223.0	COG0142@1|root,COG0142@2|Bacteria,1MWNG@1224|Proteobacteria,42NPN@68525|delta/epsilon subdivisions,2MT67@213481|Bdellovibrionales,2WIY4@28221|Deltaproteobacteria	213481|Bdellovibrionales	H	Belongs to the FPP GGPP synthase family	ispA	-	2.5.1.1,2.5.1.10,2.5.1.29	ko:K00795,ko:K13789	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	M00364,M00366	R01658,R02003,R02061	RC00279	ko00000,ko00001,ko00002,ko01000,ko01006	-	-	-	polyprenyl_synt
DYD3_k127_3006857_19	1201288.M900_1667	7.638e-22	98.0	COG0789@1|root,COG0789@2|Bacteria,1RGYB@1224|Proteobacteria,42V1F@68525|delta/epsilon subdivisions,2MTB2@213481|Bdellovibrionales,2WR79@28221|Deltaproteobacteria	213481|Bdellovibrionales	K	PFAM regulatory protein, MerR	-	-	-	-	-	-	-	-	-	-	-	-	MerR_1
DYD3_k127_3006857_9	1353529.M899_2199	4.179e-63	219.0	COG0776@1|root,COG0776@2|Bacteria,1RH5Z@1224|Proteobacteria,42TK0@68525|delta/epsilon subdivisions,2MT5R@213481|Bdellovibrionales,2WQ5D@28221|Deltaproteobacteria	213481|Bdellovibrionales	K	This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control	himA	-	-	ko:K04764	-	-	-	-	ko00000,ko03032,ko03036,ko03400	-	-	-	Bac_DNA_binding
DYD3_k127_3006857_15	1353529.M899_2108	3.116e-48	175.0	COG0292@1|root,COG0292@2|Bacteria,1RGU2@1224|Proteobacteria,42REF@68525|delta/epsilon subdivisions,2MT8B@213481|Bdellovibrionales,2WQ4F@28221|Deltaproteobacteria	213481|Bdellovibrionales	J	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit	rplT	GO:0000027,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006996,GO:0008150,GO:0009987,GO:0015934,GO:0016043,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0042254,GO:0042255,GO:0042273,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043933,GO:0044085,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071826,GO:0071840,GO:1990904	-	ko:K02887	ko03010,map03010	M00178	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_L20
DYD3_k127_3006857_21	639282.DEFDS_1502	1.584e-11	69.0	COG0291@1|root,COG0291@2|Bacteria,2GFY3@200930|Deferribacteres	200930|Deferribacteres	J	Ribosomal protein L35	rpmI	-	-	ko:K02916	ko03010,map03010	M00178	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_L35p
DYD3_k127_3006857_11	862908.BMS_2031	8.043e-59	209.0	COG0290@1|root,COG0290@2|Bacteria,1RDD2@1224|Proteobacteria,42RHA@68525|delta/epsilon subdivisions,2MT46@213481|Bdellovibrionales,2WNQW@28221|Deltaproteobacteria	213481|Bdellovibrionales	J	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins	infC	GO:0003674,GO:0003676,GO:0003723,GO:0003743,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006412,GO:0006413,GO:0006518,GO:0006807,GO:0006996,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016020,GO:0016043,GO:0019538,GO:0022411,GO:0032790,GO:0032984,GO:0032988,GO:0034641,GO:0034645,GO:0043021,GO:0043022,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1903008	-	ko:K02520	-	-	-	-	ko00000,ko03012,ko03029	-	-	-	IF3_C,IF3_N
DYD3_k127_3006857_4	862908.BMS_2033	3.406e-161	526.0	COG2937@1|root,COG2937@2|Bacteria,1MWZ6@1224|Proteobacteria,42MN4@68525|delta/epsilon subdivisions,2WJJ5@28221|Deltaproteobacteria	28221|Deltaproteobacteria	I	Belongs to the GPAT DAPAT family	plsB	-	2.3.1.15	ko:K00631	ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110	M00089	R00851,R09380	RC00004,RC00039,RC00041	ko00000,ko00001,ko00002,ko01000,ko01004	-	-	-	Acyltransferase
DYD3_k127_3006857_7	1048830.GUU_01947	6.559e-82	284.0	COG0516@1|root,COG0516@2|Bacteria,3WT11@544448|Tenericutes	544448|Tenericutes	F	Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth	guaB	-	1.1.1.205	ko:K00088	ko00230,ko00983,ko01100,ko01110,map00230,map00983,map01100,map01110	M00050	R01130,R08240	RC00143,RC02207	ko00000,ko00001,ko00002,ko01000,ko04147	-	-	-	CBS,IMPDH
DYD3_k127_3030770_0	1184267.A11Q_656	5.474e-166	530.0	COG2216@1|root,COG2216@2|Bacteria,1QY0C@1224|Proteobacteria,43DGI@68525|delta/epsilon subdivisions,2X8NC@28221|Deltaproteobacteria	28221|Deltaproteobacteria	P	E1-E2 ATPase	-	-	3.6.3.12	ko:K01547	ko02020,map02020	-	-	-	ko00000,ko00001,ko01000	3.A.3.7	-	-	E1-E2_ATPase,Hydrolase
DYD3_k127_3030770_2	1123073.KB899242_gene1507	5.488e-36	143.0	COG2156@1|root,COG2156@2|Bacteria,1RABG@1224|Proteobacteria,1S2B0@1236|Gammaproteobacteria,1X6DA@135614|Xanthomonadales	135614|Xanthomonadales	P	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit acts as a catalytic chaperone that increases the ATP- binding affinity of the ATP-hydrolyzing subunit KdpB by the formation of a transient KdpB KdpC ATP ternary complex	kdpC	-	3.6.3.12	ko:K01548	ko02020,map02020	-	-	-	ko00000,ko00001,ko01000	3.A.3.7	-	-	KdpC
DYD3_k127_3030770_1	1156937.MFUM_230013	1.027e-157	521.0	COG0642@1|root,COG2205@2|Bacteria,46UHY@74201|Verrucomicrobia,37GB8@326457|unclassified Verrucomicrobia	74201|Verrucomicrobia	T	Osmosensitive K+ channel His kinase sensor domain	kdpD	-	2.7.13.3	ko:K07646	ko02020,map02020	M00454	-	-	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	-	-	-	DUF4118,GAF_3,HATPase_c,HisKA,KdpD,Usp
DYD3_k127_3071616_5	862908.BMS_2972	6.873e-66	240.0	2FCVT@1|root,344YN@2|Bacteria,1P3BD@1224|Proteobacteria,4320J@68525|delta/epsilon subdivisions,2MT76@213481|Bdellovibrionales,2WX5V@28221|Deltaproteobacteria	213481|Bdellovibrionales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_3071616_0	1353529.M899_1327	3.002e-146	478.0	COG0741@1|root,COG1388@1|root,COG0741@2|Bacteria,COG1388@2|Bacteria,1MWKE@1224|Proteobacteria,42M5C@68525|delta/epsilon subdivisions,2MSWY@213481|Bdellovibrionales,2WJ54@28221|Deltaproteobacteria	213481|Bdellovibrionales	M	Lytic transglycosylase catalytic	mltD2	-	-	ko:K08307	-	-	-	-	ko00000,ko01000,ko01011	-	-	-	LysM,SLT
DYD3_k127_3071616_2	1353529.M899_1329	6.455e-100	332.0	COG0682@1|root,COG0682@2|Bacteria,1MVE3@1224|Proteobacteria,42M2I@68525|delta/epsilon subdivisions,2WMSH@28221|Deltaproteobacteria	28221|Deltaproteobacteria	M	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins	lgt	-	-	ko:K13292	-	-	-	-	ko00000,ko01000	-	-	-	LGT
DYD3_k127_3071616_15	215803.DB30_4097	7.466e-17	91.0	2BNKI@1|root,32H9E@2|Bacteria,1PCZV@1224|Proteobacteria,438NP@68525|delta/epsilon subdivisions,2X8T9@28221|Deltaproteobacteria,2YXCN@29|Myxococcales	28221|Deltaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_3071616_1	1209072.ALBT01000058_gene867	1.614e-126	440.0	COG4992@1|root,COG5322@1|root,COG4992@2|Bacteria,COG5322@2|Bacteria,1R6U9@1224|Proteobacteria,1RU1Z@1236|Gammaproteobacteria,1FIBF@10|Cellvibrio	1236|Gammaproteobacteria	E	Aminotransferase class-III	-	-	-	-	-	-	-	-	-	-	-	-	Aminotran_3
DYD3_k127_3071616_16	877421.AUJT01000007_gene727	1.11e-12	79.0	COG3153@1|root,COG3153@2|Bacteria,1VRKQ@1239|Firmicutes,24Y7N@186801|Clostridia,27MY4@186928|unclassified Lachnospiraceae	186801|Clostridia	S	acetyltransferase	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_3071616_4	1166018.FAES_4882	2.676e-74	266.0	COG2124@1|root,COG2124@2|Bacteria,4NG9Z@976|Bacteroidetes,47KN0@768503|Cytophagia	976|Bacteroidetes	Q	Cytochrome P450	-	-	-	-	-	-	-	-	-	-	-	-	p450
DYD3_k127_3071616_3	398512.JQKC01000017_gene3093	1.103e-86	316.0	COG0574@1|root,COG3848@1|root,COG0574@2|Bacteria,COG3848@2|Bacteria,1UIEA@1239|Firmicutes,25EJM@186801|Clostridia,3WI29@541000|Ruminococcaceae	186801|Clostridia	GT	Pyruvate phosphate dikinase, PEP/pyruvate binding domain	ppdK	-	2.7.9.1,2.7.9.2	ko:K01006,ko:K01007	ko00620,ko00680,ko00710,ko00720,ko01100,ko01120,ko01200,map00620,map00680,map00710,map00720,map01100,map01120,map01200	M00169,M00171,M00172,M00173,M00374	R00199,R00206	RC00002,RC00015	ko00000,ko00001,ko00002,ko01000	-	-	-	PEP-utilizers,PEP-utilizers_C,PPDK_N
DYD3_k127_3071616_13	592010.GCWU000182_000328	5.368e-27	121.0	COG0382@1|root,COG0382@2|Bacteria,1TR4B@1239|Firmicutes,4HF3A@91061|Bacilli	91061|Bacilli	H	UbiA prenyltransferase family	ubiA	-	2.5.1.39	ko:K03179	ko00130,ko01100,ko01110,map00130,map01100,map01110	M00117	R05000,R05615	RC00209,RC02895	ko00000,ko00001,ko00002,ko01000,ko01006	-	-	-	UbiA
DYD3_k127_3071616_12	1266845.Q783_10550	1.346e-29	126.0	COG0575@1|root,COG0575@2|Bacteria,1V6V6@1239|Firmicutes,4HVJR@91061|Bacilli	91061|Bacilli	I	CDP-archaeol synthase	-	-	-	-	-	-	-	-	-	-	-	-	CarS-like
DYD3_k127_3071616_14	946077.W5A_06436	3.037e-21	107.0	COG4591@1|root,COG4591@2|Bacteria,4NHBR@976|Bacteroidetes,1HXJE@117743|Flavobacteriia	976|Bacteroidetes	M	ABC-type transport system involved in lipoprotein release permease component	lolC	-	-	ko:K09808	ko02010,map02010	M00255	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.125	-	-	FtsX,MacB_PCD
DYD3_k127_3071616_11	1123517.JOMR01000001_gene308	1.54e-32	141.0	COG4591@1|root,COG4591@2|Bacteria,1R4Q2@1224|Proteobacteria,1S1AK@1236|Gammaproteobacteria	1236|Gammaproteobacteria	M	COG4591 ABC-type transport system, involved in lipoprotein release, permease component	VPA0558	-	-	ko:K02004	-	M00258	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	FtsX,MacB_PCD
DYD3_k127_3071616_6	1121904.ARBP01000002_gene6767	1.792e-64	228.0	COG1136@1|root,COG1136@2|Bacteria,4NGY1@976|Bacteroidetes	2|Bacteria	V	ATPases associated with a variety of cellular activities	-	-	-	ko:K02003	-	M00258	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	ABC_tran
DYD3_k127_3071616_7	945713.IALB_3136	5.132e-44	170.0	COG2834@1|root,COG2834@2|Bacteria	2|Bacteria	M	Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane)	VPA0557	-	-	-	-	-	-	-	-	-	-	-	DUF4292,LolA_like
DYD3_k127_3097083_5	1250006.JHZZ01000001_gene1987	0.0001427	48.0	COG4704@1|root,COG4704@2|Bacteria,4NUS8@976|Bacteroidetes,1I45Z@117743|Flavobacteriia,3VWRK@52959|Polaribacter	976|Bacteroidetes	S	Uncharacterized protein conserved in bacteria (DUF2141)	-	-	-	-	-	-	-	-	-	-	-	-	DUF2141
DYD3_k127_3097083_1	1112217.PPL19_22699	3.336e-49	189.0	COG1635@1|root,COG1635@2|Bacteria,1QV1K@1224|Proteobacteria,1T2UT@1236|Gammaproteobacteria	1236|Gammaproteobacteria	H	Lycopene cyclase protein	-	-	5.5.1.19	ko:K06443	ko00906,ko01100,ko01110,map00906,map01100,map01110	M00097	R03824,R04801,R05341,R06962,R07856	RC01004,RC01964	ko00000,ko00001,ko00002,ko01000	-	-	-	Lycopene_cycl
DYD3_k127_3097083_3	1184267.A11Q_738	2.195e-44	166.0	COG0503@1|root,COG0503@2|Bacteria,1MVZ6@1224|Proteobacteria,42QSH@68525|delta/epsilon subdivisions,2MU1N@213481|Bdellovibrionales,2WP5X@28221|Deltaproteobacteria	213481|Bdellovibrionales	F	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis	apt	-	2.4.2.7	ko:K00759	ko00230,ko01100,map00230,map01100	-	R00190,R01229,R04378	RC00063	ko00000,ko00001,ko01000,ko04147	-	-	-	Pribosyltran
DYD3_k127_3097083_4	1201290.M902_2923	2.972e-07	63.0	COG3637@1|root,COG3637@2|Bacteria	2|Bacteria	M	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety	-	-	-	ko:K22110	-	-	-	-	ko00000,ko02000	1.B.35.1,1.B.35.2	-	-	MtrB_PioB,OMP_b-brl,OMP_b-brl_2
DYD3_k127_3097083_0	500635.MITSMUL_03536	5.866e-63	224.0	COG1189@1|root,COG1189@2|Bacteria,1TPE4@1239|Firmicutes,4H37C@909932|Negativicutes	909932|Negativicutes	J	Ribosomal RNA large subunit methyltransferase J	rrmJ	-	2.1.1.226,2.1.1.227	ko:K06442	-	-	-	-	ko00000,ko01000,ko03009	-	-	-	FtsJ,S4
DYD3_k127_3097083_2	862908.BMS_3091	3.975e-47	180.0	COG0253@1|root,COG0253@2|Bacteria,1MWDH@1224|Proteobacteria,42MRX@68525|delta/epsilon subdivisions,2MTBV@213481|Bdellovibrionales,2WMP4@28221|Deltaproteobacteria	213481|Bdellovibrionales	E	Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan	dapF	-	5.1.1.7	ko:K01778	ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00300,map01100,map01110,map01120,map01130,map01230	M00016,M00525,M00527	R02735	RC00302	ko00000,ko00001,ko00002,ko01000	-	-	-	DAP_epimerase
DYD3_k127_3131093_1	888062.HMPREF9083_0267	1.308e-103	353.0	COG0621@1|root,COG0621@2|Bacteria,1TNYN@1239|Firmicutes,4H1VJ@909932|Negativicutes	909932|Negativicutes	H	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine	miaB	-	2.8.4.3	ko:K06168	-	-	R10645,R10646,R10647	RC00003,RC00980,RC03221,RC03222	ko00000,ko01000,ko03016	-	-	-	Radical_SAM,TRAM,UPF0004
DYD3_k127_3131093_16	929558.SMGD1_0145	0.0002898	49.0	COG0454@1|root,COG3246@1|root,COG0456@2|Bacteria,COG3246@2|Bacteria,1MZTP@1224|Proteobacteria,42PZT@68525|delta/epsilon subdivisions	1224|Proteobacteria	K	beta-keto acid cleavage enzyme	-	-	2.3.1.247	ko:K18013	ko00310,map00310	-	R10564	RC02728,RC03199	ko00000,ko00001,ko01000	-	-	-	Acetyltransf_1,BKACE
DYD3_k127_3131093_7	757424.Hsero_3284	4.315e-52	189.0	COG1611@1|root,COG1611@2|Bacteria,1RD59@1224|Proteobacteria,2VRA6@28216|Betaproteobacteria,473BN@75682|Oxalobacteraceae	28216|Betaproteobacteria	S	Belongs to the LOG family	yvdD_1	-	3.2.2.10	ko:K06966	ko00230,ko00240,map00230,map00240	-	R00182,R00510	RC00063,RC00318	ko00000,ko00001,ko01000	-	-	-	Lysine_decarbox
DYD3_k127_3131093_9	1353529.M899_2711	1.151e-47	177.0	COG2917@1|root,COG2917@2|Bacteria,1Q6K5@1224|Proteobacteria,433B7@68525|delta/epsilon subdivisions,2MUII@213481|Bdellovibrionales,2WXYM@28221|Deltaproteobacteria	213481|Bdellovibrionales	D	probably involved in intracellular septation	ispZ	-	-	ko:K06190	-	-	-	-	ko00000	-	-	-	IspA
DYD3_k127_3131093_6	1353529.M899_2715	1.534e-58	214.0	COG0564@1|root,COG0564@2|Bacteria,1MVJ5@1224|Proteobacteria,42N4V@68525|delta/epsilon subdivisions,2X6EJ@28221|Deltaproteobacteria	28221|Deltaproteobacteria	J	RNA pseudouridylate synthase	-	-	5.4.99.23	ko:K06180	-	-	-	-	ko00000,ko01000,ko03009	-	-	-	PseudoU_synth_2
DYD3_k127_3131093_3	862908.BMS_2699	5.699e-91	306.0	COG1360@1|root,COG1360@2|Bacteria	2|Bacteria	N	Flagellar Motor Protein	-	-	-	ko:K02557	ko02030,ko02040,map02030,map02040	-	-	-	ko00000,ko00001,ko02000,ko02035	1.A.30.1	-	-	MotB_plug,OmpA
DYD3_k127_3131093_2	1201288.M900_2077	4.099e-98	326.0	COG1291@1|root,COG1291@2|Bacteria,1MXK3@1224|Proteobacteria,42QCX@68525|delta/epsilon subdivisions,2MU7E@213481|Bdellovibrionales,2WKYY@28221|Deltaproteobacteria	213481|Bdellovibrionales	N	PFAM MotA TolQ ExbB proton channel	-	-	-	ko:K02556	ko02020,ko02030,ko02040,map02020,map02030,map02040	-	-	-	ko00000,ko00001,ko02000,ko02035	1.A.30.1	-	-	MotA_ExbB
DYD3_k127_3131093_5	1353529.M899_2732	9.647e-62	220.0	COG0147@1|root,COG0147@2|Bacteria,1MVBJ@1224|Proteobacteria,42P55@68525|delta/epsilon subdivisions,2MU8R@213481|Bdellovibrionales,2WKYQ@28221|Deltaproteobacteria	213481|Bdellovibrionales	EH	TIGRFAM para-aminobenzoate synthase, subunit I	pabB	-	2.6.1.85,4.1.3.38	ko:K01665,ko:K03342	ko00790,map00790	-	R01716,R05553	RC00010,RC01418,RC01843,RC02148	ko00000,ko00001,ko01000,ko01007	-	-	-	Aminotran_4,Chorismate_bind
DYD3_k127_3131093_13	1353529.M899_2732	3.032e-17	88.0	COG0147@1|root,COG0147@2|Bacteria,1MVBJ@1224|Proteobacteria,42P55@68525|delta/epsilon subdivisions,2MU8R@213481|Bdellovibrionales,2WKYQ@28221|Deltaproteobacteria	213481|Bdellovibrionales	EH	TIGRFAM para-aminobenzoate synthase, subunit I	pabB	-	2.6.1.85,4.1.3.38	ko:K01665,ko:K03342	ko00790,map00790	-	R01716,R05553	RC00010,RC01418,RC01843,RC02148	ko00000,ko00001,ko01000,ko01007	-	-	-	Aminotran_4,Chorismate_bind
DYD3_k127_3131093_0	1353529.M899_2733	1.079e-148	483.0	COG0305@1|root,COG0305@2|Bacteria,1MUG9@1224|Proteobacteria,42M7X@68525|delta/epsilon subdivisions,2MSQA@213481|Bdellovibrionales,2WJCA@28221|Deltaproteobacteria	213481|Bdellovibrionales	L	it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins	dnaB	-	3.6.4.12	ko:K02314	ko03030,ko04112,map03030,map04112	-	-	-	ko00000,ko00001,ko01000,ko03032	-	-	-	DnaB,DnaB_C
DYD3_k127_3131093_10	862908.BMS_2711	5.273e-44	166.0	COG0359@1|root,COG0359@2|Bacteria,1RD0R@1224|Proteobacteria,42SCQ@68525|delta/epsilon subdivisions,2MT9R@213481|Bdellovibrionales,2WPZQ@28221|Deltaproteobacteria	213481|Bdellovibrionales	J	Binds to the 23S rRNA	rplI	GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904	-	ko:K02939	ko03010,map03010	M00178	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_L9_C,Ribosomal_L9_N
DYD3_k127_3131093_12	1201288.M900_2082	1.34e-31	136.0	COG4241@1|root,COG4241@2|Bacteria,1Q1UZ@1224|Proteobacteria,437HD@68525|delta/epsilon subdivisions,2MTDH@213481|Bdellovibrionales,2X2QX@28221|Deltaproteobacteria	213481|Bdellovibrionales	S	Predicted membrane protein (DUF2232)	-	-	-	-	-	-	-	-	-	-	-	-	DUF2232
DYD3_k127_3131093_8	1201290.M902_2100	7.693e-48	181.0	COG0238@1|root,COG0360@1|root,COG0238@2|Bacteria,COG0360@2|Bacteria	2|Bacteria	J	Binds together with S18 to 16S ribosomal RNA	rpsF	GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0019843,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0048027,GO:0070181,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904	4.3.1.19	ko:K01754,ko:K02963,ko:K02990	ko00260,ko00290,ko01100,ko01110,ko01130,ko01200,ko01230,ko03010,map00260,map00290,map01100,map01110,map01130,map01200,map01230,map03010	M00178,M00570	R00220,R00996	RC00418,RC02600	br01610,ko00000,ko00001,ko00002,ko01000,ko03011,ko03029	-	-	-	Ribosomal_S18,Ribosomal_S6
DYD3_k127_3131093_4	1353529.M899_1632	1.156e-71	254.0	28WTE@1|root,2ZISX@2|Bacteria,1PADX@1224|Proteobacteria,432P4@68525|delta/epsilon subdivisions,2MUH7@213481|Bdellovibrionales,2WY2E@28221|Deltaproteobacteria	213481|Bdellovibrionales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_3172341_3	1353529.M899_3058	3.126e-25	108.0	COG0451@1|root,COG0451@2|Bacteria,1N8PG@1224|Proteobacteria,42TCH@68525|delta/epsilon subdivisions,2WPEI@28221|Deltaproteobacteria	28221|Deltaproteobacteria	GM	NAD dependent epimerase/dehydratase family	-	-	5.1.3.2	ko:K01784	ko00052,ko00520,ko01100,map00052,map00520,map01100	M00361,M00362,M00632	R00291,R02984	RC00289	ko00000,ko00001,ko00002,ko01000	-	-	-	Epimerase
DYD3_k127_3172341_0	1353529.M899_3057	3.577e-93	314.0	COG0204@1|root,COG0204@2|Bacteria,1R9IG@1224|Proteobacteria,42T29@68525|delta/epsilon subdivisions,2MT91@213481|Bdellovibrionales,2WPJ8@28221|Deltaproteobacteria	213481|Bdellovibrionales	I	Acyltransferase	-	-	-	-	-	-	-	-	-	-	-	-	Acyltransferase
DYD3_k127_3172341_2	1201288.M900_0615	1.671e-71	248.0	COG0218@1|root,COG0218@2|Bacteria,1MY3Z@1224|Proteobacteria,42RJR@68525|delta/epsilon subdivisions,2MTE4@213481|Bdellovibrionales,2WMK3@28221|Deltaproteobacteria	213481|Bdellovibrionales	D	Necessary for normal cell division and for the maintenance of normal septation	engB	GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464	-	ko:K03978	-	-	-	-	ko00000,ko03036	-	-	-	MMR_HSR1
DYD3_k127_3172341_1	862908.BMS_0486	2.682e-86	303.0	COG2204@1|root,COG2204@2|Bacteria,1MU0N@1224|Proteobacteria,42Z2A@68525|delta/epsilon subdivisions,2MTND@213481|Bdellovibrionales,2WUNW@28221|Deltaproteobacteria	213481|Bdellovibrionales	K	Sigma-54 interaction domain	-	-	-	-	-	-	-	-	-	-	-	-	Sigma54_activat
DYD3_k127_3172341_5	862908.BMS_0488	3.197e-13	75.0	2EJ56@1|root,33CWD@2|Bacteria,1NMPP@1224|Proteobacteria,4337G@68525|delta/epsilon subdivisions,2MTC6@213481|Bdellovibrionales,2WY0X@28221|Deltaproteobacteria	213481|Bdellovibrionales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_3181856_2	1229204.AMYY01000011_gene165	1.041e-114	384.0	COG0370@1|root,COG0370@2|Bacteria,1MUZC@1224|Proteobacteria,2TQSU@28211|Alphaproteobacteria	28211|Alphaproteobacteria	P	Ferrous iron transport protein B	feoB	-	-	ko:K04759	-	-	-	-	ko00000,ko02000	9.A.8.1	-	-	FeoB_C,FeoB_N,Gate
DYD3_k127_3181856_7	1211114.ALIP01000140_gene2340	0.0001746	48.0	COG1918@1|root,COG1918@2|Bacteria,1NASN@1224|Proteobacteria,1SFH7@1236|Gammaproteobacteria,1XC9A@135614|Xanthomonadales	135614|Xanthomonadales	P	ferrous iron transport protein	feoA	-	-	ko:K04758	-	-	-	-	ko00000,ko02000	-	-	-	FeoA
DYD3_k127_3181856_1	717774.Marme_4050	1.418e-144	475.0	COG0737@1|root,COG0737@2|Bacteria,1MX03@1224|Proteobacteria,1RPX3@1236|Gammaproteobacteria,1XINS@135619|Oceanospirillales	135619|Oceanospirillales	F	Belongs to the 5'-nucleotidase family	ushA	-	3.1.3.5,3.6.1.45	ko:K11751	ko00230,ko00240,ko00760,ko01100,ko01110,map00230,map00240,map00760,map01100,map01110	-	R00183,R00511,R00963,R01126,R01227,R01569,R01664,R01968,R02088,R02102,R02323,R02719,R03346	RC00017	ko00000,ko00001,ko01000	-	-	-	5_nucleotid_C,Metallophos
DYD3_k127_3181856_4	1047013.AQSP01000118_gene1243	2.317e-56	205.0	COG1864@1|root,COG1864@2|Bacteria,2NRFT@2323|unclassified Bacteria	2|Bacteria	F	DNA/RNA non-specific endonuclease	nucA	-	-	ko:K01173	ko04210,map04210	-	-	-	ko00000,ko00001,ko03029	-	-	-	Endonuclease_NS
DYD3_k127_3181856_3	391625.PPSIR1_21804	4.069e-76	282.0	COG2202@1|root,COG4191@1|root,COG2202@2|Bacteria,COG4191@2|Bacteria,1RCM9@1224|Proteobacteria,42NFY@68525|delta/epsilon subdivisions,2WJKV@28221|Deltaproteobacteria	28221|Deltaproteobacteria	T	PFAM ATP-binding region, ATPase domain protein	-	-	2.7.13.3	ko:K02482,ko:K10819	-	-	-	-	ko00000,ko01000,ko01001,ko02022	-	-	-	HAMP,HATPase_c,HisKA,PAS,PAS_4,PAS_8,PAS_9
DYD3_k127_3181856_6	1101195.Meth11DRAFT_0904	1.199e-22	114.0	COG0642@1|root,COG2205@2|Bacteria,1R8EX@1224|Proteobacteria,2VSAK@28216|Betaproteobacteria,2KNF5@206350|Nitrosomonadales	206350|Nitrosomonadales	T	Domain present in phytochromes and cGMP-specific phosphodiesterases.	-	-	-	-	-	-	-	-	-	-	-	-	GAF,HATPase_c,HisKA,PAS
DYD3_k127_3181856_0	1250232.JQNJ01000001_gene638	1.513e-243	770.0	COG0339@1|root,COG0339@2|Bacteria,4NFYA@976|Bacteroidetes,1HX30@117743|Flavobacteriia	976|Bacteroidetes	E	peptidase	dcp	-	3.4.15.5,3.4.24.70	ko:K01284,ko:K01414	-	-	-	-	ko00000,ko01000,ko01002	-	-	-	Peptidase_M3
DYD3_k127_3181856_5	1353529.M899_3138	7.11e-26	111.0	COG3202@1|root,COG3202@2|Bacteria,1MVP5@1224|Proteobacteria,42MNS@68525|delta/epsilon subdivisions,2WSQX@28221|Deltaproteobacteria	28221|Deltaproteobacteria	C	ATP ADP translocase	-	-	-	ko:K03301	-	-	-	-	ko00000	2.A.12	-	-	MFS_1,TLC
DYD3_k127_3183586_3	1206730.BAGA01000139_gene3361	6.599e-09	58.0	COG1403@1|root,COG1403@2|Bacteria	2|Bacteria	V	endonuclease activity	-	-	-	-	-	-	-	-	-	-	-	-	DUF222,HNH,HNH_5
DYD3_k127_3183586_0	1201288.M900_A0251	7.86e-130	428.0	COG1404@1|root,COG1404@2|Bacteria,1RCVT@1224|Proteobacteria	1224|Proteobacteria	O	Subtilase family	-	-	-	-	-	-	-	-	-	-	-	-	Peptidase_S8
DYD3_k127_3183586_1	1353529.M899_1820	1.544e-85	293.0	COG3591@1|root,COG3591@2|Bacteria,1NP6U@1224|Proteobacteria,42ZKY@68525|delta/epsilon subdivisions,2MTXG@213481|Bdellovibrionales,2WUS6@28221|Deltaproteobacteria	213481|Bdellovibrionales	E	Belongs to the peptidase S1B family	-	-	-	-	-	-	-	-	-	-	-	-	Trypsin_2
DYD3_k127_3183586_2	1122207.MUS1_08715	1.014e-11	72.0	COG0835@1|root,COG0835@2|Bacteria,1RCIR@1224|Proteobacteria,1S61F@1236|Gammaproteobacteria,1XKR5@135619|Oceanospirillales	135619|Oceanospirillales	NT	Chemotaxis signal transduction protein	pilI	-	-	ko:K02659	ko02020,ko02025,map02020,map02025	-	-	-	ko00000,ko00001,ko02035,ko02044	-	-	-	CheW
DYD3_k127_320451_42	1411123.JQNH01000001_gene2271	3.879e-06	54.0	COG2823@1|root,COG2823@2|Bacteria,1N1R4@1224|Proteobacteria,2UDII@28211|Alphaproteobacteria	28211|Alphaproteobacteria	S	periplasmic or secreted lipoprotein	-	-	-	-	-	-	-	-	-	-	-	-	BON
DYD3_k127_320451_4	264462.Bd0448	2.628e-164	531.0	COG1502@1|root,COG1502@2|Bacteria,1MUDJ@1224|Proteobacteria,42M77@68525|delta/epsilon subdivisions,2MTBA@213481|Bdellovibrionales,2WM41@28221|Deltaproteobacteria	213481|Bdellovibrionales	I	Phospholipase D. Active site motifs.	-	-	-	ko:K06132	ko00564,ko01100,map00564,map01100	-	R11062	RC00017	ko00000,ko00001,ko01000	-	-	-	PLDc_2
DYD3_k127_320451_26	1396418.BATQ01000016_gene4273	1.072e-43	172.0	COG0697@1|root,COG0697@2|Bacteria,46T3I@74201|Verrucomicrobia,2IVMP@203494|Verrucomicrobiae	203494|Verrucomicrobiae	EG	EamA-like transporter family	-	-	-	-	-	-	-	-	-	-	-	-	EamA
DYD3_k127_320451_11	1005994.GTGU_04458	1.087e-84	298.0	COG1167@1|root,COG1167@2|Bacteria,1MV6F@1224|Proteobacteria,1RMQ0@1236|Gammaproteobacteria	1236|Gammaproteobacteria	K	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs	yjiR	GO:0006139,GO:0006351,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0018130,GO:0019438,GO:0032774,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0046483,GO:0071704,GO:0090304,GO:0097659,GO:1901360,GO:1901362,GO:1901576	-	-	-	-	-	-	-	-	-	-	Aminotran_1_2,GntR
DYD3_k127_320451_39	243924.LT42_19770	2.674e-12	72.0	COG0745@1|root,COG0745@2|Bacteria,1MY3D@1224|Proteobacteria,1RPKN@1236|Gammaproteobacteria	1236|Gammaproteobacteria	K	Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain	ompR	GO:0000156,GO:0000160,GO:0000976,GO:0001067,GO:0001130,GO:0001216,GO:0001217,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006355,GO:0007154,GO:0007165,GO:0008150,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009987,GO:0010468,GO:0010556,GO:0010557,GO:0010558,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0019219,GO:0019222,GO:0023052,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0032991,GO:0032993,GO:0035556,GO:0043565,GO:0044212,GO:0044424,GO:0044464,GO:0045892,GO:0045893,GO:0045934,GO:0045935,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051172,GO:0051173,GO:0051252,GO:0051253,GO:0051254,GO:0051716,GO:0060089,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:0140110,GO:1901363,GO:1902679,GO:1902680,GO:1903506,GO:1903507,GO:1903508,GO:1990837,GO:2000112,GO:2000113,GO:2001141	-	ko:K07659	ko02020,ko02026,map02020,map02026	M00445,M00742,M00743	-	-	ko00000,ko00001,ko00002,ko02022	-	-	-	Response_reg,Trans_reg_C
DYD3_k127_320451_24	1123269.NX02_23295	1.191e-59	216.0	COG2230@1|root,COG2230@2|Bacteria,1QUR4@1224|Proteobacteria,2TW4A@28211|Alphaproteobacteria,2K357@204457|Sphingomonadales	204457|Sphingomonadales	M	Mycolic acid cyclopropane synthetase	-	-	2.1.1.95	ko:K05928	ko00130,ko01100,ko01110,map00130,map01100,map01110	M00112	R07236,R07504,R10491,R10492	RC00003,RC01662	ko00000,ko00001,ko00002,ko01000	-	-	-	CMAS
DYD3_k127_320451_23	765869.BDW_03465	6.123e-60	219.0	COG0583@1|root,COG0583@2|Bacteria,1MW16@1224|Proteobacteria,42U8R@68525|delta/epsilon subdivisions,2MU1D@213481|Bdellovibrionales,2WQ0V@28221|Deltaproteobacteria	213481|Bdellovibrionales	K	transcriptional regulator	-	-	-	-	-	-	-	-	-	-	-	-	HTH_1,LysR_substrate
DYD3_k127_320451_36	264462.Bd1005	5.243e-19	94.0	COG2353@1|root,COG2353@2|Bacteria,1R9XD@1224|Proteobacteria,42T4I@68525|delta/epsilon subdivisions,2MTWW@213481|Bdellovibrionales,2X5P3@28221|Deltaproteobacteria	213481|Bdellovibrionales	S	Belongs to the UPF0312 family	-	-	-	-	-	-	-	-	-	-	-	-	YceI
DYD3_k127_320451_7	1254432.SCE1572_30505	3.956e-125	409.0	COG0604@1|root,COG0604@2|Bacteria,1MWBD@1224|Proteobacteria,42PQH@68525|delta/epsilon subdivisions,2WM5W@28221|Deltaproteobacteria,2Z39N@29|Myxococcales	28221|Deltaproteobacteria	C	Zinc-binding dehydrogenase	-	-	1.6.5.5	ko:K00344	-	-	-	-	ko00000,ko01000	-	-	-	ADH_N,ADH_zinc_N,ADH_zinc_N_2
DYD3_k127_320451_37	290397.Adeh_3956	9.633e-17	89.0	2A9VF@1|root,30Z3B@2|Bacteria,1PKZS@1224|Proteobacteria,435JG@68525|delta/epsilon subdivisions,2WZXJ@28221|Deltaproteobacteria,2Z0YG@29|Myxococcales	28221|Deltaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_320451_16	264462.Bd3687	1.086e-72	250.0	COG0500@1|root,COG0500@2|Bacteria,1RDHE@1224|Proteobacteria,43CA2@68525|delta/epsilon subdivisions,2MTYF@213481|Bdellovibrionales,2X7KJ@28221|Deltaproteobacteria	213481|Bdellovibrionales	Q	Protein of unknown function (DUF938)	-	-	-	-	-	-	-	-	-	-	-	-	DUF938
DYD3_k127_320451_19	1134474.O59_003374	8.07e-67	231.0	COG3812@1|root,COG3812@2|Bacteria,1RGUV@1224|Proteobacteria,1S24N@1236|Gammaproteobacteria,1FGTA@10|Cellvibrio	1236|Gammaproteobacteria	S	Domain of unknown function (DUF1993)	-	-	-	ko:K09983	-	-	-	-	ko00000	-	-	-	DUF1993
DYD3_k127_320451_21	886293.Sinac_0491	3.885e-66	239.0	COG1680@1|root,COG1680@2|Bacteria,2IZDA@203682|Planctomycetes	203682|Planctomycetes	V	Beta-lactamase class C	-	-	-	-	-	-	-	-	-	-	-	-	Beta-lactamase
DYD3_k127_320451_43	688270.Celal_3761	1.39e-05	52.0	COG5492@1|root,COG5492@2|Bacteria,4NT99@976|Bacteroidetes,1I25B@117743|Flavobacteriia	976|Bacteroidetes	N	Bacterial Ig-like domain 2	-	-	-	-	-	-	-	-	-	-	-	-	Alpha-amylase,Beta_helix,Big_2,CBM26,CBM9_1,DM13,DUF4979,Pectate_lyase_3
DYD3_k127_320451_2	556268.OFAG_00774	5.375e-207	660.0	COG0465@1|root,COG0465@2|Bacteria,1MU6J@1224|Proteobacteria,2VHEM@28216|Betaproteobacteria,478MR@75682|Oxalobacteraceae	28216|Betaproteobacteria	O	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins	-	-	-	ko:K03798	-	M00742	-	-	ko00000,ko00002,ko01000,ko01002,ko03110	-	-	-	AAA,FtsH_ext,Peptidase_M41
DYD3_k127_320451_34	1306990.BARG01000002_gene101	8.613e-23	115.0	COG1404@1|root,COG1404@2|Bacteria,2GKJR@201174|Actinobacteria	201174|Actinobacteria	O	Belongs to the peptidase S8 family	-	-	-	-	-	-	-	-	-	-	-	-	PPC,Peptidase_S8
DYD3_k127_320451_17	644968.DFW101_2310	8.478e-70	256.0	COG0642@1|root,COG2205@2|Bacteria,1MW8M@1224|Proteobacteria,42R77@68525|delta/epsilon subdivisions,2WMVR@28221|Deltaproteobacteria,2MAKU@213115|Desulfovibrionales	28221|Deltaproteobacteria	T	Integral membrane sensor signal transduction histidine kinase	-	-	-	-	-	-	-	-	-	-	-	-	HAMP,HATPase_c,HisKA
DYD3_k127_320451_15	349521.HCH_00579	9.291e-74	254.0	COG0745@1|root,COG0745@2|Bacteria,1MU67@1224|Proteobacteria,1RNWH@1236|Gammaproteobacteria,1XJ8U@135619|Oceanospirillales	135619|Oceanospirillales	K	Response regulator receiver	-	-	-	ko:K02483	-	-	-	-	ko00000,ko02022	-	-	-	Response_reg,Trans_reg_C
DYD3_k127_320451_32	264462.Bd2165	1.956e-26	113.0	COG1765@1|root,COG1765@2|Bacteria,1RCZW@1224|Proteobacteria,42VTN@68525|delta/epsilon subdivisions,2WRRM@28221|Deltaproteobacteria	28221|Deltaproteobacteria	O	OsmC-like protein	-	-	-	ko:K07397	-	-	-	-	ko00000	-	-	-	OsmC
DYD3_k127_320451_25	700598.Niako_2103	9.437e-46	171.0	COG1651@1|root,COG1651@2|Bacteria,4NQ9P@976|Bacteroidetes,1ISGX@117747|Sphingobacteriia	976|Bacteroidetes	O	PFAM DSBA-like thioredoxin domain	-	-	-	-	-	-	-	-	-	-	-	-	Thioredoxin_4
DYD3_k127_320451_28	421531.IX38_22685	4.564e-41	158.0	COG1651@1|root,COG1651@2|Bacteria,4NQ9P@976|Bacteroidetes,1I8YG@117743|Flavobacteriia,3ZPI2@59732|Chryseobacterium	976|Bacteroidetes	O	DSBA-like thioredoxin domain	-	-	-	-	-	-	-	-	-	-	-	-	Thioredoxin_4
DYD3_k127_320451_38	1283300.ATXB01000001_gene1713	3.995e-16	83.0	COG5502@1|root,COG5502@2|Bacteria,1NB8V@1224|Proteobacteria,1SETZ@1236|Gammaproteobacteria	1236|Gammaproteobacteria	S	Uncharacterized conserved protein (DUF2267)	-	-	-	-	-	-	-	-	-	-	-	-	DUF2267
DYD3_k127_320451_8	243231.GSU0801	7.955e-125	413.0	COG3637@1|root,COG3637@2|Bacteria,1QUUK@1224|Proteobacteria	1224|Proteobacteria	M	Alginate export	-	-	-	-	-	-	-	-	-	-	-	-	Alginate_exp
DYD3_k127_320451_6	883126.HMPREF9710_01038	4.663e-144	463.0	COG0657@1|root,COG0657@2|Bacteria,1NEXK@1224|Proteobacteria,2VPP7@28216|Betaproteobacteria,4724Q@75682|Oxalobacteraceae	28216|Betaproteobacteria	I	alpha/beta hydrolase fold	-	-	-	ko:K01066	-	-	-	-	ko00000,ko01000	-	-	-	Abhydrolase_3
DYD3_k127_320451_13	1349767.GJA_5429	9.185e-83	283.0	COG1075@1|root,COG1075@2|Bacteria,1QWT0@1224|Proteobacteria,2VIF6@28216|Betaproteobacteria,473V2@75682|Oxalobacteraceae	28216|Betaproteobacteria	S	Alpha/beta hydrolase family	-	-	-	-	-	-	-	-	-	-	-	-	Abhydrolase_6
DYD3_k127_320451_29	1071679.BG57_26925	1.116e-33	134.0	COG1959@1|root,COG1959@2|Bacteria,1N1AX@1224|Proteobacteria,2VVDW@28216|Betaproteobacteria,1K7BV@119060|Burkholderiaceae	28216|Betaproteobacteria	K	Transcriptional regulator	-	-	-	-	-	-	-	-	-	-	-	-	Rrf2
DYD3_k127_320451_1	1196322.A370_05906	1.879e-234	750.0	COG0466@1|root,COG0466@2|Bacteria,1TNYG@1239|Firmicutes,247SH@186801|Clostridia,36EC1@31979|Clostridiaceae	186801|Clostridia	O	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner	lon	-	3.4.21.53	ko:K01338	ko04112,map04112	-	-	-	ko00000,ko00001,ko01000,ko01002	-	-	-	AAA,LON_substr_bdg,Lon_C
DYD3_k127_320451_35	1169144.KB910932_gene791	1.344e-20	94.0	COG0640@1|root,COG0640@2|Bacteria,1VAK2@1239|Firmicutes,4HMC7@91061|Bacilli,1ZH68@1386|Bacillus	91061|Bacilli	K	Bacterial regulatory protein, arsR family	yczG	-	-	-	-	-	-	-	-	-	-	-	HTH_20,HTH_5
DYD3_k127_320451_27	1353529.M899_1495	9.653e-43	160.0	COG3118@1|root,COG3118@2|Bacteria,1MZBB@1224|Proteobacteria,42TPU@68525|delta/epsilon subdivisions,2MT2V@213481|Bdellovibrionales,2WQ1M@28221|Deltaproteobacteria	213481|Bdellovibrionales	O	Belongs to the thioredoxin family	trxA	-	-	ko:K03671	ko04621,ko05418,map04621,map05418	-	-	-	ko00000,ko00001,ko03110	-	-	-	Thioredoxin
DYD3_k127_320451_0	1201290.M902_2738	2.546e-311	1030.0	COG3209@1|root,COG3391@1|root,COG3209@2|Bacteria,COG3391@2|Bacteria,1MVV1@1224|Proteobacteria,42R71@68525|delta/epsilon subdivisions,2MTDG@213481|Bdellovibrionales,2WMW5@28221|Deltaproteobacteria	213481|Bdellovibrionales	M	RHS Repeat	-	-	-	-	-	-	-	-	-	-	-	-	DUF4150,RHS,RHS_repeat,Transglut_core
DYD3_k127_320451_40	649639.Bcell_3566	3.507e-08	66.0	COG0841@1|root,COG0841@2|Bacteria,1UMIR@1239|Firmicutes,4ITW6@91061|Bacilli,1ZDQC@1386|Bacillus	91061|Bacilli	V	Bacterial Ig-like domain (group 3)	-	-	-	-	-	-	-	-	-	-	-	-	Big_3_2,Big_3_3
DYD3_k127_320451_12	1353529.M899_1765	1.347e-84	296.0	COG0312@1|root,COG0312@2|Bacteria,1MUVW@1224|Proteobacteria,42RID@68525|delta/epsilon subdivisions,2MU6N@213481|Bdellovibrionales,2WN9N@28221|Deltaproteobacteria	213481|Bdellovibrionales	S	Peptidase U62 modulator of DNA gyrase	pmbA	-	-	ko:K03592	-	-	-	-	ko00000,ko01002	-	-	-	PmbA_TldD
DYD3_k127_320451_3	862908.BMS_1711	2.138e-168	540.0	COG0312@1|root,COG0312@2|Bacteria,1MUSK@1224|Proteobacteria,42QCV@68525|delta/epsilon subdivisions,2MTJW@213481|Bdellovibrionales,2WJP8@28221|Deltaproteobacteria	213481|Bdellovibrionales	S	Peptidase U62 modulator of DNA gyrase	tldD	-	-	ko:K03568	-	-	-	-	ko00000,ko01002	-	-	-	PmbA_TldD
DYD3_k127_320451_18	1220582.RRU01S_04_01140	7.768e-68	241.0	COG0702@1|root,COG0702@2|Bacteria,1MW44@1224|Proteobacteria,2TRDF@28211|Alphaproteobacteria,4BA15@82115|Rhizobiaceae	28211|Alphaproteobacteria	GM	NmrA-like family	ytfG	GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0008152,GO:0016491,GO:0016651,GO:0016655,GO:0044424,GO:0044444,GO:0044464,GO:0055114	1.6.5.2	ko:K19267	ko00130,ko01110,map00130,map01110	-	R02964,R03643,R03816	RC00819	ko00000,ko00001,ko01000	-	-	-	NAD_binding_10,NmrA
DYD3_k127_320451_20	1242864.D187_009189	2.767e-66	237.0	COG0583@1|root,COG0583@2|Bacteria,1MW16@1224|Proteobacteria,42U8R@68525|delta/epsilon subdivisions,2WQ0V@28221|Deltaproteobacteria	28221|Deltaproteobacteria	K	transcriptional regulator	-	-	-	-	-	-	-	-	-	-	-	-	HTH_1,LysR_substrate
DYD3_k127_320451_10	1333998.M2A_1906	9.876e-98	333.0	COG0596@1|root,COG0596@2|Bacteria,1MWVN@1224|Proteobacteria,2TQVB@28211|Alphaproteobacteria,4BPWP@82117|unclassified Alphaproteobacteria	28211|Alphaproteobacteria	S	Epoxide hydrolase N terminus	-	-	3.3.2.9	ko:K01253	ko00980,ko04976,ko05204,map00980,map04976,map05204	-	R07013,R07014,R07027,R07071,R07072,R07082,R09410,R09417,R09443	RC01447,RC01728,RC01764,RC02528	ko00000,ko00001,ko01000,ko01002	-	-	-	EHN
DYD3_k127_320451_30	358220.C380_12520	2.806e-29	121.0	COG2050@1|root,COG2050@2|Bacteria,1QU0P@1224|Proteobacteria,2VTB0@28216|Betaproteobacteria	28216|Betaproteobacteria	Q	Putative thioesterase (yiiD_Cterm)	-	-	-	-	-	-	-	-	-	-	-	-	YiiD_C
DYD3_k127_320451_9	395961.Cyan7425_1969	1.033e-102	342.0	COG2066@1|root,COG2066@2|Bacteria,1G1IK@1117|Cyanobacteria,3KH5H@43988|Cyanothece	1117|Cyanobacteria	E	Belongs to the glutaminase family	glsA	-	3.5.1.2	ko:K01425	ko00220,ko00250,ko00471,ko01100,ko04724,ko04727,ko04964,ko05206,ko05230,map00220,map00250,map00471,map01100,map04724,map04727,map04964,map05206,map05230	-	R00256,R01579	RC00010,RC02798	ko00000,ko00001,ko01000	-	-	-	Glutaminase,STAS,cNMP_binding
DYD3_k127_320451_5	1184267.A11Q_378	3.641e-146	467.0	COG1131@1|root,COG1131@2|Bacteria,1MUX3@1224|Proteobacteria,42MV1@68525|delta/epsilon subdivisions,2MT0J@213481|Bdellovibrionales,2WK9W@28221|Deltaproteobacteria	213481|Bdellovibrionales	V	PFAM ABC transporter	ybhF-C	-	-	ko:K01990,ko:K01992,ko:K09695	ko02010,map02010	M00252,M00254	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1,3.A.1.102	-	-	ABC2_membrane_3,ABC_tran,DUF4162
DYD3_k127_320451_14	240016.ABIZ01000001_gene714	2.083e-75	260.0	COG0842@1|root,COG0842@2|Bacteria	2|Bacteria	V	Transport permease protein	nodJ	-	-	ko:K09694	ko02010,map02010	M00252	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.102	-	-	ABC2_membrane
DYD3_k127_320451_22	1121324.CLIT_2c03230	7.483e-61	222.0	COG2998@1|root,COG2998@2|Bacteria,1V9V8@1239|Firmicutes,25H3U@186801|Clostridia	186801|Clostridia	H	Copper amine oxidase N-terminal domain	-	-	-	-	-	-	-	-	-	-	-	-	Cu_amine_oxidN1
DYD3_k127_320451_33	42099.EPrPV00000020649	9.331e-26	114.0	COG0705@1|root,KOG2980@2759|Eukaryota,1MH50@121069|Pythiales	121069|Pythiales	T	Serine protease family S54. Source PGD	-	-	-	-	-	-	-	-	-	-	-	-	Rhomboid
DYD3_k127_321707_2	1201290.M902_1295	2.934e-21	98.0	COG1536@1|root,COG1536@2|Bacteria	2|Bacteria	N	FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation	fliF	-	-	ko:K02409,ko:K02410	ko02030,ko02040,map02030,map02040	-	-	-	ko00000,ko00001,ko02035,ko02044	3.A.6.2,3.A.6.3	-	-	FliG_C,FliG_M,FliG_N,YscJ_FliF
DYD3_k127_321707_3	221027.JO40_06310	5.384e-05	51.0	COG0664@1|root,COG0664@2|Bacteria,2J5G6@203691|Spirochaetes	203691|Spirochaetes	T	cyclic nucleotide-binding	-	-	-	-	-	-	-	-	-	-	-	-	cNMP_binding
DYD3_k127_321707_1	1353529.M899_0197	1.138e-67	241.0	COG0248@1|root,COG0248@2|Bacteria,1MV35@1224|Proteobacteria,42NIH@68525|delta/epsilon subdivisions,2MTAX@213481|Bdellovibrionales,2WQJT@28221|Deltaproteobacteria	213481|Bdellovibrionales	FP	PFAM Ppx GppA phosphatase	gppA-1	-	3.6.1.11,3.6.1.40	ko:K01524	ko00230,map00230	-	R03409	RC00002	ko00000,ko00001,ko01000	-	-	-	Ppx-GppA
DYD3_k127_321707_0	1353529.M899_0196	4.418e-117	386.0	COG0182@1|root,COG0182@2|Bacteria,1MUPM@1224|Proteobacteria,42MJ2@68525|delta/epsilon subdivisions,2MTY0@213481|Bdellovibrionales,2WJQB@28221|Deltaproteobacteria	213481|Bdellovibrionales	J	Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P)	mtnA	-	5.3.1.23	ko:K08963	ko00270,ko01100,map00270,map01100	M00034	R04420	RC01151	ko00000,ko00001,ko00002,ko01000	-	-	-	IF-2B
DYD3_k127_3247404_1	1201288.M900_0628	2.411e-316	984.0	COG0280@1|root,COG0281@1|root,COG0280@2|Bacteria,COG0281@2|Bacteria,1MU0A@1224|Proteobacteria,42MDI@68525|delta/epsilon subdivisions,2MSS0@213481|Bdellovibrionales,2WIVY@28221|Deltaproteobacteria	213481|Bdellovibrionales	C	malic protein domain protein	maeB	-	1.1.1.40	ko:K00029	ko00620,ko00710,ko01100,ko01120,ko01200,map00620,map00710,map01100,map01120,map01200	M00169,M00172	R00216	RC00105	ko00000,ko00001,ko00002,ko01000	-	-	iAF987.Gmet_1637	Malic_M,PTA_PTB,malic
DYD3_k127_3247404_3	1201290.M902_0361	4.025e-52	187.0	COG0251@1|root,COG0251@2|Bacteria,1MZ3J@1224|Proteobacteria,42TSD@68525|delta/epsilon subdivisions,2MT9J@213481|Bdellovibrionales,2WQ6E@28221|Deltaproteobacteria	213481|Bdellovibrionales	J	PFAM Endoribonuclease L-PSP	-	-	3.5.99.10	ko:K09022	-	-	R11098,R11099	RC03275,RC03354	ko00000,ko01000	-	-	-	Ribonuc_L-PSP
DYD3_k127_3247404_5	1201288.M900_0626	6.052e-29	125.0	COG1434@1|root,COG1434@2|Bacteria,1Q5EB@1224|Proteobacteria,432FB@68525|delta/epsilon subdivisions,2WY9S@28221|Deltaproteobacteria	28221|Deltaproteobacteria	S	DUF218 domain	-	-	-	-	-	-	-	-	-	-	-	-	DUF218
DYD3_k127_3247404_0	1353529.M899_3043	0.0	1032.0	COG0317@1|root,COG0317@2|Bacteria,1MU44@1224|Proteobacteria,42M6W@68525|delta/epsilon subdivisions,2MSUS@213481|Bdellovibrionales,2WIZF@28221|Deltaproteobacteria	213481|Bdellovibrionales	KT	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance	relA	-	2.7.6.5	ko:K00951	ko00230,map00230	-	R00429	RC00002,RC00078	ko00000,ko00001,ko01000	-	-	-	ACT_4,HD_4,RelA_SpoT,TGS
DYD3_k127_3247404_2	862908.BMS_0491	6.627e-58	206.0	COG0194@1|root,COG0194@2|Bacteria,1MW92@1224|Proteobacteria,42R4H@68525|delta/epsilon subdivisions,2MT5N@213481|Bdellovibrionales,2WNAD@28221|Deltaproteobacteria	213481|Bdellovibrionales	F	Essential for recycling GMP and indirectly, cGMP	gmk	GO:0003674,GO:0003824,GO:0004385,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009126,GO:0009132,GO:0009135,GO:0009150,GO:0009161,GO:0009165,GO:0009167,GO:0009179,GO:0009185,GO:0009259,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0042278,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046037,GO:0046128,GO:0046483,GO:0046710,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0072521,GO:0090407,GO:1901068,GO:1901135,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901576,GO:1901657	2.7.4.8	ko:K00942	ko00230,ko01100,map00230,map01100	M00050	R00332,R02090	RC00002	ko00000,ko00001,ko00002,ko01000	-	-	-	Guanylate_kin
DYD3_k127_3247404_4	862908.BMS_0490	1.964e-29	118.0	COG1561@1|root,COG1561@2|Bacteria,1MWRA@1224|Proteobacteria,42RFR@68525|delta/epsilon subdivisions,2MT39@213481|Bdellovibrionales,2WJYK@28221|Deltaproteobacteria	213481|Bdellovibrionales	S	YicC domain protein	yicC	-	-	-	-	-	-	-	-	-	-	-	DUF1732,YicC_N
DYD3_k127_3260869_1	862908.BMS_3404	1.181e-70	264.0	COG0741@1|root,COG0741@2|Bacteria,1MV3F@1224|Proteobacteria,42N7A@68525|delta/epsilon subdivisions,2MUQ6@213481|Bdellovibrionales,2WQFJ@28221|Deltaproteobacteria	213481|Bdellovibrionales	M	PFAM Lytic transglycosylase catalytic	-	-	-	ko:K08309	-	-	-	-	ko00000,ko01000,ko01011	-	GH23	-	SLT,SLT_L,TPR_16,TPR_6
DYD3_k127_3260869_2	1201290.M902_1560	1.992e-38	150.0	2EU5D@1|root,33MN1@2|Bacteria,1NN7M@1224|Proteobacteria	1224|Proteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_3260869_0	862908.BMS_3402	1.24e-128	422.0	COG0489@1|root,COG0489@2|Bacteria,1MU7R@1224|Proteobacteria,42NR0@68525|delta/epsilon subdivisions,2MSYB@213481|Bdellovibrionales,2WIPG@28221|Deltaproteobacteria	213481|Bdellovibrionales	D	Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP	mrp	-	-	ko:K03593	-	-	-	-	ko00000,ko03029,ko03036	-	-	-	FeS_assembly_P,ParA
DYD3_k127_3302117_0	1230343.CANP01000023_gene1722	7.164e-58	211.0	COG2027@1|root,COG2027@2|Bacteria,1RKPD@1224|Proteobacteria,1S896@1236|Gammaproteobacteria,1JCZS@118969|Legionellales	118969|Legionellales	M	Protein of unknown function (DUF1460)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1460
DYD3_k127_3331589_0	1341181.FLJC2902T_05060	6.731e-171	563.0	COG3386@1|root,COG3386@2|Bacteria,4PKPT@976|Bacteroidetes,1IKDI@117743|Flavobacteriia,2P0DY@237|Flavobacterium	976|Bacteroidetes	G	Domain of unknown function (DUF5122) beta-propeller	-	-	-	-	-	-	-	-	-	-	-	-	DUF5122
DYD3_k127_3331589_1	1071679.BG57_14470	2.063e-78	270.0	COG1028@1|root,COG1028@2|Bacteria,1MXNY@1224|Proteobacteria,2VN50@28216|Betaproteobacteria,1K3D6@119060|Burkholderiaceae	28216|Betaproteobacteria	IQ	Short-chain dehydrogenase reductase sdr	-	-	1.1.1.100	ko:K00059	ko00061,ko00333,ko00780,ko01040,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01040,map01100,map01130,map01212	M00083,M00572	R04533,R04534,R04536,R04543,R04566,R04953,R04964,R07759,R07763,R10116,R10120,R11671	RC00029,RC00117	ko00000,ko00001,ko00002,ko01000,ko01004	-	-	-	adh_short_C2
DYD3_k127_3331589_2	1242864.D187_003853	5.812e-40	153.0	COG1309@1|root,COG1309@2|Bacteria,1N68B@1224|Proteobacteria	1224|Proteobacteria	K	Bacterial regulatory proteins, tetR family	-	-	-	-	-	-	-	-	-	-	-	-	TetR_N
DYD3_k127_3355174_0	313594.PI23P_08350	1.203e-72	257.0	COG0491@1|root,COG0491@2|Bacteria,4NYGS@976|Bacteroidetes,1IB5Q@117743|Flavobacteriia	976|Bacteroidetes	S	Metallo-beta-lactamase superfamily	-	-	-	-	-	-	-	-	-	-	-	-	Lactamase_B
DYD3_k127_3355174_1	84531.JMTZ01000039_gene535	1.963e-28	125.0	COG0491@1|root,COG0491@2|Bacteria,1R5KK@1224|Proteobacteria,1RY5Y@1236|Gammaproteobacteria	1236|Gammaproteobacteria	S	Metallo-beta-lactamase superfamily	-	-	-	-	-	-	-	-	-	-	-	-	Lactamase_B
DYD3_k127_3397171_6	862908.BMS_0167	3.648e-51	194.0	COG4552@1|root,COG4552@2|Bacteria,1P8GX@1224|Proteobacteria,432DT@68525|delta/epsilon subdivisions,2MTBZ@213481|Bdellovibrionales,2WYDX@28221|Deltaproteobacteria	213481|Bdellovibrionales	S	Acetyltransferase (GNAT) domain	-	-	-	-	-	-	-	-	-	-	-	-	Acetyltransf_9
DYD3_k127_3397171_0	1353529.M899_0172	1.942e-141	453.0	COG1344@1|root,COG1344@2|Bacteria,1MV1N@1224|Proteobacteria,42MX8@68525|delta/epsilon subdivisions,2MTHE@213481|Bdellovibrionales,2WKE1@28221|Deltaproteobacteria	213481|Bdellovibrionales	N	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella	fliC	-	-	ko:K02406	ko02020,ko02040,ko04621,ko04626,ko05132,ko05134,map02020,map02040,map04621,map04626,map05132,map05134	-	-	-	ko00000,ko00001,ko02035	-	-	-	Flagellin_C,Flagellin_IN,Flagellin_N
DYD3_k127_3397171_2	862908.BMS_0169	1.716e-114	374.0	COG1344@1|root,COG1344@2|Bacteria,1MV1N@1224|Proteobacteria,42MX8@68525|delta/epsilon subdivisions,2MUPT@213481|Bdellovibrionales,2WIK0@28221|Deltaproteobacteria	213481|Bdellovibrionales	N	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella	-	-	-	ko:K02406	ko02020,ko02040,ko04621,ko04626,ko05132,ko05134,map02020,map02040,map04621,map04626,map05132,map05134	-	-	-	ko00000,ko00001,ko02035	-	-	-	Flagellin_C,Flagellin_N
DYD3_k127_3397171_3	1353529.M899_0175	9.401e-90	304.0	COG1091@1|root,COG1091@2|Bacteria	2|Bacteria	M	dTDP-4-dehydrorhamnose reductase activity	rmlD	-	1.1.1.133	ko:K00067	ko00521,ko00523,ko01130,map00521,map00523,map01130	M00793	R02777	RC00182	ko00000,ko00001,ko00002,ko01000	-	-	-	RmlD_sub_bind
DYD3_k127_3397171_5	862908.BMS_0171	4.118e-60	214.0	2CD09@1|root,2ZWRV@2|Bacteria,1P61H@1224|Proteobacteria,4333E@68525|delta/epsilon subdivisions,2MTA4@213481|Bdellovibrionales,2WXH2@28221|Deltaproteobacteria	213481|Bdellovibrionales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_3397171_10	862908.BMS_0172	5.825e-11	64.0	COG3847@1|root,COG3847@2|Bacteria	2|Bacteria	U	Flp Fap pilin component	-	-	-	ko:K02651	ko04112,map04112	-	-	-	ko00000,ko00001,ko02035,ko02044	-	-	-	Flp_Fap
DYD3_k127_3397171_7	1201288.M900_0238	2.605e-28	120.0	COG4960@1|root,COG4960@2|Bacteria	2|Bacteria	OU	Type IV leader peptidase family	tadV	-	3.4.23.43	ko:K02278	-	-	-	-	ko00000,ko01000,ko02035,ko02044	-	-	-	Peptidase_A24
DYD3_k127_3397171_4	862908.BMS_0178	1.246e-86	294.0	COG3745@1|root,COG3745@2|Bacteria,1NDG2@1224|Proteobacteria,42WK8@68525|delta/epsilon subdivisions,2MT5Z@213481|Bdellovibrionales,2WRTY@28221|Deltaproteobacteria	213481|Bdellovibrionales	U	flp pilus assembly protein CpaB	cpaB	-	-	ko:K02279	-	-	-	-	ko00000,ko02035,ko02044	-	-	-	RcpC,SAF
DYD3_k127_3397171_1	862908.BMS_0179	8.973e-131	433.0	COG4796@1|root,COG4796@2|Bacteria,1NE2V@1224|Proteobacteria,43EIK@68525|delta/epsilon subdivisions,2MT0C@213481|Bdellovibrionales,2X8H4@28221|Deltaproteobacteria	213481|Bdellovibrionales	U	Bacterial type II and III secretion system protein	-	-	-	ko:K02280	-	-	-	-	ko00000,ko02035,ko02044	-	-	-	Secretin,T2SS-T3SS_pil_N
DYD3_k127_3422880_0	264462.Bd2226	0.0	1088.0	COG3696@1|root,COG3696@2|Bacteria,1NUIV@1224|Proteobacteria,42M0A@68525|delta/epsilon subdivisions,2MTHN@213481|Bdellovibrionales,2WIQY@28221|Deltaproteobacteria	213481|Bdellovibrionales	P	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family	-	-	-	ko:K07787,ko:K15726	ko02020,map02020	-	-	-	ko00000,ko00001,ko02000	2.A.6.1.2,2.A.6.1.4	-	-	ACR_tran
DYD3_k127_3422880_10	1184267.A11Q_507	4.673e-44	176.0	COG1538@1|root,COG1538@2|Bacteria,1QBNS@1224|Proteobacteria,437T1@68525|delta/epsilon subdivisions,2MUK9@213481|Bdellovibrionales,2X327@28221|Deltaproteobacteria	213481|Bdellovibrionales	MU	HAS ABC exporter outer membrane component	-	-	-	ko:K12340	ko01501,ko01503,ko02020,ko03070,ko04626,ko05133,map01501,map01503,map02020,map03070,map04626,map05133	M00325,M00326,M00339,M00571,M00575,M00646,M00647,M00696,M00697,M00709,M00720,M00821	-	-	ko00000,ko00001,ko00002,ko01504,ko02000,ko02044	1.B.17,2.A.6.2	-	-	OEP
DYD3_k127_3422880_2	1444711.CCJF01000004_gene2307	5.332e-184	597.0	COG2015@1|root,COG2015@2|Bacteria	2|Bacteria	Q	COG2015, Alkyl sulfatase and related hydrolases	yjcS	GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0006082,GO:0006790,GO:0006805,GO:0008150,GO:0008152,GO:0008484,GO:0009410,GO:0009987,GO:0016787,GO:0016788,GO:0018741,GO:0018909,GO:0030288,GO:0030313,GO:0031975,GO:0042221,GO:0042597,GO:0043436,GO:0044237,GO:0044281,GO:0044464,GO:0050896,GO:0051716,GO:0070887,GO:0071466,GO:0071704	-	-	-	-	-	-	-	-	-	-	Alkyl_sulf_C,Alkyl_sulf_dimr,Lactamase_B
DYD3_k127_3422880_11	62928.azo3210	3.936e-24	111.0	COG2829@1|root,COG2829@2|Bacteria,1PC8I@1224|Proteobacteria,2VMT8@28216|Betaproteobacteria,2KV87@206389|Rhodocyclales	206389|Rhodocyclales	M	Phospholipase A1	-	-	-	-	-	-	-	-	-	-	-	-	PLA1
DYD3_k127_3422880_14	63737.Npun_F3111	2.544e-06	52.0	COG0428@1|root,COG0428@2|Bacteria,1G2YK@1117|Cyanobacteria	1117|Cyanobacteria	PT	cyclic nucleotide-binding domain	-	-	-	ko:K07238	-	-	-	-	ko00000,ko02000	2.A.5.5	-	-	-
DYD3_k127_3422880_8	1173024.KI912151_gene2427	6.589e-52	193.0	COG3228@1|root,COG3228@2|Bacteria,1G43W@1117|Cyanobacteria,1JKRG@1189|Stigonemataceae	1117|Cyanobacteria	S	Glucose-regulated metallo-peptidase M90	-	-	-	ko:K09933	-	-	-	-	ko00000,ko01002	-	-	-	Peptidase_M90
DYD3_k127_3422880_6	400668.Mmwyl1_1454	5.798e-76	269.0	COG0438@1|root,COG0438@2|Bacteria,1NE3V@1224|Proteobacteria,1RQE3@1236|Gammaproteobacteria,1XMF4@135619|Oceanospirillales	135619|Oceanospirillales	M	Glycosyl transferases group 1	-	-	-	ko:K02844	ko00540,ko01100,map00540,map01100	M00080	-	-	ko00000,ko00001,ko00002,ko01000,ko01003,ko01005	-	GT4	-	Glyco_transf_4,Glycos_transf_1
DYD3_k127_3422880_5	862908.BMS_1718	2.279e-86	301.0	COG0784@1|root,COG2206@1|root,COG0784@2|Bacteria,COG2206@2|Bacteria	2|Bacteria	T	PFAM metal-dependent phosphohydrolase, HD sub domain	cnpD3	-	3.6.1.11,3.6.1.40	ko:K01524,ko:K07016	ko00230,map00230	-	R03409	RC00002	ko00000,ko00001,ko01000,ko02048	-	-	-	HD,HD_5,Response_reg
DYD3_k127_3422880_3	1201288.M900_0778	1.046e-110	368.0	COG1509@1|root,COG1509@2|Bacteria,1MUPJ@1224|Proteobacteria,42MNR@68525|delta/epsilon subdivisions,2MT2E@213481|Bdellovibrionales,2WJ70@28221|Deltaproteobacteria	213481|Bdellovibrionales	C	Lysine 2,3-aminomutase YodO family protein	kamA	-	5.4.3.2	ko:K01843	ko00310,map00310	-	R00461	RC00303	ko00000,ko00001,ko01000	-	-	-	Fer4_12,Fer4_14,LAM_C,Radical_SAM
DYD3_k127_3422880_7	1353529.M899_1154	8.843e-63	227.0	COG0847@1|root,COG2378@1|root,COG0847@2|Bacteria,COG2378@2|Bacteria,1MV8Z@1224|Proteobacteria,42MQQ@68525|delta/epsilon subdivisions,2MT3A@213481|Bdellovibrionales,2WK68@28221|Deltaproteobacteria	213481|Bdellovibrionales	L	EXOIII	-	-	2.7.7.7	ko:K02342	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	M00260	R00375,R00376,R00377,R00378	RC02795	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	-	-	-	RNase_T
DYD3_k127_3422880_1	1353529.M899_1153	3.496e-237	740.0	COG1249@1|root,COG1249@2|Bacteria,1MU2U@1224|Proteobacteria,42N8Y@68525|delta/epsilon subdivisions,2WIR7@28221|Deltaproteobacteria	28221|Deltaproteobacteria	C	Pyridine nucleotide-disulphide oxidoreductase, dimerisation	lpdA	-	1.8.1.4	ko:K00382	ko00010,ko00020,ko00260,ko00280,ko00620,ko00630,ko00640,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00020,map00260,map00280,map00620,map00630,map00640,map01100,map01110,map01120,map01130,map01200	M00009,M00011,M00036,M00307,M00532	R00209,R01221,R01698,R03815,R07618,R08549	RC00004,RC00022,RC00583,RC02742,RC02833,RC02834	br01601,ko00000,ko00001,ko00002,ko01000,ko04147	-	-	-	Pyr_redox_2,Pyr_redox_dim
DYD3_k127_3422880_4	880073.Calab_0664	1.993e-98	336.0	COG0508@1|root,COG0508@2|Bacteria,2NNZ8@2323|unclassified Bacteria	2|Bacteria	C	e3 binding domain	bfmBB	-	2.3.1.168,2.3.1.61	ko:K00658,ko:K09699	ko00020,ko00280,ko00310,ko00640,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00280,map00310,map00640,map01100,map01110,map01120,map01130,map01200	M00009,M00011,M00032,M00036	R02570,R02571,R02662,R03174,R04097,R08549,R10998	RC00004,RC02727,RC02833,RC02870	br01601,ko00000,ko00001,ko00002,ko01000	-	-	-	2-oxoacid_dh,Biotin_lipoyl,E3_binding
DYD3_k127_3422880_9	1201290.M902_0891	2.542e-44	177.0	COG2984@1|root,COG4191@1|root,COG2984@2|Bacteria,COG4191@2|Bacteria,1RCM9@1224|Proteobacteria,42MC4@68525|delta/epsilon subdivisions,2MSXW@213481|Bdellovibrionales,2WIZU@28221|Deltaproteobacteria	213481|Bdellovibrionales	T	Histidine kinase A domain protein	-	-	-	-	-	-	-	-	-	-	-	-	ABC_sub_bind,HATPase_c,HisKA,PAS_3,PAS_4,PAS_9,Response_reg
DYD3_k127_3424628_2	693444.D782_1095	1.965e-60	217.0	COG0566@1|root,COG0566@2|Bacteria,1MXGV@1224|Proteobacteria,1RNWQ@1236|Gammaproteobacteria	1236|Gammaproteobacteria	J	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family	yfiF	GO:0000154,GO:0000451,GO:0000453,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008171,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016435,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0070039,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360	-	ko:K03214	-	-	-	-	ko00000,ko01000,ko03009,ko03016	-	-	-	SpoU_methylase,SpoU_sub_bind
DYD3_k127_3424628_1	1121434.AULY01000010_gene2292	1.231e-87	299.0	COG2933@1|root,COG2933@2|Bacteria,1MWBM@1224|Proteobacteria,42PNE@68525|delta/epsilon subdivisions,2WKCK@28221|Deltaproteobacteria,2MABQ@213115|Desulfovibrionales	28221|Deltaproteobacteria	J	FtsJ-like methyltransferase	-	-	2.1.1.186	ko:K06968	-	-	-	-	ko00000,ko01000,ko03009	-	-	-	FtsJ
DYD3_k127_3424628_0	3067.XP_002954349.1	1.069e-99	338.0	COG1092@1|root,2QS1I@2759|Eukaryota,37IID@33090|Viridiplantae,34H8I@3041|Chlorophyta	3041|Chlorophyta	J	S-adenosylmethionine-dependent methyltransferase	-	-	-	-	-	-	-	-	-	-	-	-	Methyltrans_SAM
DYD3_k127_3424628_6	862908.BMS_0918	1.509e-06	57.0	2E9YV@1|root,3344D@2|Bacteria,1N91C@1224|Proteobacteria,42V9B@68525|delta/epsilon subdivisions,2MTE5@213481|Bdellovibrionales,2WSH5@28221|Deltaproteobacteria	213481|Bdellovibrionales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_3424628_5	589865.DaAHT2_0154	1.236e-16	86.0	COG1595@1|root,COG1595@2|Bacteria,1Q4ZI@1224|Proteobacteria,42TYH@68525|delta/epsilon subdivisions,2WQNG@28221|Deltaproteobacteria	28221|Deltaproteobacteria	K	Belongs to the sigma-70 factor family. ECF subfamily	carQ	-	-	ko:K03088	-	-	-	-	ko00000,ko03021	-	-	-	Sigma70_r2,Sigma70_r4,Sigma70_r4_2
DYD3_k127_3424628_3	1122236.KB905142_gene548	8.859e-22	99.0	2DIKN@1|root,32UB8@2|Bacteria,1N2WQ@1224|Proteobacteria,2VVBM@28216|Betaproteobacteria,2KNUE@206350|Nitrosomonadales	206350|Nitrosomonadales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_3424628_4	247639.MGP2080_01406	5.958e-19	95.0	28NQX@1|root,2ZBQB@2|Bacteria,1RBV5@1224|Proteobacteria	1224|Proteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_3436111_6	1246995.AFR_16455	2.636e-14	85.0	2CKMT@1|root,32YH1@2|Bacteria,2IJID@201174|Actinobacteria	201174|Actinobacteria	S	Parallel beta-helix repeats	-	-	-	-	-	-	-	-	-	-	-	-	Beta_helix
DYD3_k127_3436111_5	1184267.A11Q_208	6.845e-18	93.0	COG3093@1|root,COG3093@2|Bacteria,1Q234@1224|Proteobacteria,437QF@68525|delta/epsilon subdivisions,2MUDN@213481|Bdellovibrionales,2X2YY@28221|Deltaproteobacteria	213481|Bdellovibrionales	K	Domain of unknown function (DUF4423)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4423
DYD3_k127_3436111_0	1353529.M899_1128	0.0	1394.0	COG0060@1|root,COG0060@2|Bacteria,1MVBQ@1224|Proteobacteria,42MKB@68525|delta/epsilon subdivisions,2MSPK@213481|Bdellovibrionales,2WJ4W@28221|Deltaproteobacteria	213481|Bdellovibrionales	J	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)	ileS	-	6.1.1.5	ko:K01870	ko00970,map00970	M00359,M00360	R03656	RC00055,RC00523	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	-	-	-	Anticodon_1,tRNA-synt_1
DYD3_k127_3436111_3	1353529.M899_1126	1.516e-37	146.0	COG0424@1|root,COG0424@2|Bacteria,1RH6H@1224|Proteobacteria,42SR7@68525|delta/epsilon subdivisions,2MT8T@213481|Bdellovibrionales,2WP65@28221|Deltaproteobacteria	213481|Bdellovibrionales	D	Maf-like protein	maf	-	-	ko:K06287	-	-	-	-	ko00000	-	-	-	Maf
DYD3_k127_3485266_2	172088.AUGA01000018_gene2125	1.3e-43	165.0	COG0370@1|root,COG0370@2|Bacteria,1MUZC@1224|Proteobacteria,2TQSU@28211|Alphaproteobacteria,3JUFP@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	Ferrous iron transport protein B	feoB	-	-	ko:K04759	-	-	-	-	ko00000,ko02000	9.A.8.1	-	-	FeoB_C,FeoB_N,Gate
DYD3_k127_3485266_3	929556.Solca_3149	5.412e-29	122.0	COG2050@1|root,COG2050@2|Bacteria,4P2ZC@976|Bacteroidetes	976|Bacteroidetes	Q	Domain of unknown function (DUF4442)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4442
DYD3_k127_3485266_0	1353529.M899_3135	1.032e-125	410.0	COG2070@1|root,COG2070@2|Bacteria,1MU0U@1224|Proteobacteria,42S7V@68525|delta/epsilon subdivisions,2MSV3@213481|Bdellovibrionales,2WNFD@28221|Deltaproteobacteria	213481|Bdellovibrionales	S	Nitronate monooxygenase	-	-	1.13.12.16	ko:K00459	ko00910,map00910	-	R00025	RC02541,RC02759	ko00000,ko00001,ko01000	-	-	-	NMO
DYD3_k127_3485266_1	862908.BMS_3021	1.102e-48	183.0	COG2234@1|root,COG2234@2|Bacteria,1MXJC@1224|Proteobacteria,42RKA@68525|delta/epsilon subdivisions,2MSY3@213481|Bdellovibrionales,2WUCM@28221|Deltaproteobacteria	213481|Bdellovibrionales	S	Peptidase family M28	-	-	3.4.11.10	ko:K05994	-	-	-	-	ko00000,ko01000,ko01002	-	-	-	Peptidase_M28
DYD3_k127_3503804_1	1353529.M899_0902	2.767e-241	759.0	COG0514@1|root,COG0514@2|Bacteria,1MVGG@1224|Proteobacteria,42MV3@68525|delta/epsilon subdivisions,2MSRV@213481|Bdellovibrionales,2WJZB@28221|Deltaproteobacteria	213481|Bdellovibrionales	L	ATP-dependent DNA helicase RecQ	recQ	-	3.6.4.12	ko:K03654	ko03018,map03018	-	-	-	ko00000,ko00001,ko01000,ko03400	-	-	-	DEAD,HRDC,HTH_40,Helicase_C,RQC,RecQ_Zn_bind
DYD3_k127_3503804_6	1380387.JADM01000004_gene2871	1.05e-84	296.0	COG4325@1|root,COG4325@2|Bacteria,1MXTM@1224|Proteobacteria,1RNYZ@1236|Gammaproteobacteria,1XM1A@135619|Oceanospirillales	135619|Oceanospirillales	S	Predicted membrane protein (DUF2254)	-	-	-	-	-	-	-	-	-	-	-	-	DUF2254
DYD3_k127_3503804_3	1146883.BLASA_2950	2.309e-103	345.0	COG0668@1|root,COG0668@2|Bacteria,2H4WB@201174|Actinobacteria	201174|Actinobacteria	M	Mechanosensitive ion channel	-	-	-	-	-	-	-	-	-	-	-	-	MS_channel
DYD3_k127_3503804_0	1233951.IO90_04355	0.0	1068.0	COG1012@1|root,COG2030@1|root,COG1012@2|Bacteria,COG2030@2|Bacteria,4NI68@976|Bacteroidetes,1HXAQ@117743|Flavobacteriia,3HI14@358033|Chryseobacterium	976|Bacteroidetes	CI	Catalyzes the ring cleavage reaction in phenylacetate degradation and the formation of 3-hydroxyacyl-CoA from crotonyl-CoA	paaN	-	1.2.1.91,3.3.2.12	ko:K02618	ko00360,ko01120,map00360,map01120	-	R09820,R09836	RC00080,RC02667	ko00000,ko00001,ko01000	-	-	-	Aldedh,DUF1569,MaoC_dehydratas
DYD3_k127_3503804_5	1385935.N836_30250	3.712e-86	302.0	COG3250@1|root,COG3250@2|Bacteria,1GD73@1117|Cyanobacteria	1117|Cyanobacteria	G	Horizontally Transferred TransMembrane Domain	-	-	-	-	-	-	-	-	-	-	-	-	VKG_Carbox
DYD3_k127_3503804_8	109760.SPPG_02720T0	8.521e-48	179.0	COG2940@1|root,KOG1082@2759|Eukaryota	2759|Eukaryota	Z	Histone-lysine N-methyltransferase	-	GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0006325,GO:0006464,GO:0006479,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008213,GO:0008276,GO:0008757,GO:0009987,GO:0010452,GO:0016043,GO:0016278,GO:0016279,GO:0016569,GO:0016570,GO:0016571,GO:0016740,GO:0016741,GO:0018022,GO:0018024,GO:0018193,GO:0018205,GO:0019538,GO:0032259,GO:0034968,GO:0036211,GO:0042054,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044464,GO:0046975,GO:0051276,GO:0071704,GO:0071840,GO:0140096,GO:1901564	2.1.1.43	ko:K11433	ko00310,map00310	-	R03875,R03938,R04866,R04867	RC00003,RC00060,RC00181,RC00496	ko00000,ko00001,ko01000,ko03036	-	-	-	Pre-SET,SET
DYD3_k127_3503804_4	700598.Niako_2137	8.645e-94	314.0	2C0ZU@1|root,32R7S@2|Bacteria,4P4KK@976|Bacteroidetes	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_3503804_9	1485545.JQLW01000005_gene1149	1.145e-13	85.0	2E2SU@1|root,3014J@2|Bacteria,1RG0V@1224|Proteobacteria	1224|Proteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_3503804_2	1353529.M899_0938	6.737e-229	718.0	COG3634@1|root,COG3634@2|Bacteria,1MUKD@1224|Proteobacteria,42P04@68525|delta/epsilon subdivisions,2MTQR@213481|Bdellovibrionales,2WMFA@28221|Deltaproteobacteria	213481|Bdellovibrionales	O	Pyridine nucleotide-disulphide oxidoreductase	ahpF	-	-	ko:K03387	-	-	-	-	ko00000,ko01000	-	-	-	Pyr_redox_2,Thioredoxin_3
DYD3_k127_3503804_7	1237149.C900_01570	7.326e-75	259.0	COG0550@1|root,COG0550@2|Bacteria,4NF9S@976|Bacteroidetes,47K7C@768503|Cytophagia	976|Bacteroidetes	L	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone	topA	-	5.99.1.2	ko:K03168	-	-	-	-	ko00000,ko01000,ko03032,ko03400	-	-	-	Topoisom_bac,Toprim,Toprim_C_rpt
DYD3_k127_3520629_1	1353529.M899_1986	1.145e-184	582.0	COG4962@1|root,COG4962@2|Bacteria,1R7SU@1224|Proteobacteria,42PWC@68525|delta/epsilon subdivisions,2MSQG@213481|Bdellovibrionales,2WM34@28221|Deltaproteobacteria	213481|Bdellovibrionales	U	Flp pilus assembly protein, ATPase CpaF	-	-	-	ko:K02283	-	-	-	-	ko00000,ko02035,ko02044	-	-	-	T2SSE
DYD3_k127_3520629_0	1201290.M902_3122	1.721e-200	631.0	COG0148@1|root,COG0148@2|Bacteria,1MU1N@1224|Proteobacteria,42MS9@68525|delta/epsilon subdivisions,2MSQE@213481|Bdellovibrionales,2WJMS@28221|Deltaproteobacteria	213481|Bdellovibrionales	F	Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis	eno	-	4.2.1.11	ko:K01689	ko00010,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko03018,ko04066,map00010,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map03018,map04066	M00001,M00002,M00003,M00346,M00394	R00658	RC00349	ko00000,ko00001,ko00002,ko01000,ko03019,ko04147	-	-	-	Enolase_C,Enolase_N
DYD3_k127_3536071_3	862908.BMS_2071	9.068e-22	103.0	COG1564@1|root,COG1564@2|Bacteria	2|Bacteria	H	THIamine pyrophosphokinase	thiN	-	2.7.6.2	ko:K00949	ko00730,ko01100,map00730,map01100	-	R00619	RC00002,RC00017	ko00000,ko00001,ko01000	-	-	-	PglZ,TPK_B1_binding,TPK_catalytic
DYD3_k127_3536071_2	862908.BMS_2073	1.052e-41	162.0	COG3503@1|root,COG3503@2|Bacteria,1RA1Q@1224|Proteobacteria	1224|Proteobacteria	S	membrane	-	-	-	-	-	-	-	-	-	-	-	-	DUF1624
DYD3_k127_3536071_0	1201288.M900_1117	2.985e-161	524.0	COG1333@1|root,COG1333@2|Bacteria,1P0AC@1224|Proteobacteria,431KJ@68525|delta/epsilon subdivisions,2MT72@213481|Bdellovibrionales,2WWUQ@28221|Deltaproteobacteria	213481|Bdellovibrionales	O	ResB-like family	-	-	-	-	-	-	-	-	-	-	-	-	ResB
DYD3_k127_3536071_1	1201288.M900_1118	7.301e-158	512.0	COG0755@1|root,COG0755@2|Bacteria,1RG0A@1224|Proteobacteria,42N37@68525|delta/epsilon subdivisions,2MSY8@213481|Bdellovibrionales,2WPT0@28221|Deltaproteobacteria	213481|Bdellovibrionales	O	Cytochrome C assembly protein	-	-	-	-	-	-	-	-	-	-	-	-	Cytochrom_C_asm,ResB
DYD3_k127_3582570_0	926549.KI421517_gene662	2.951e-60	214.0	COG0288@1|root,COG0288@2|Bacteria,4NH0X@976|Bacteroidetes,47PCP@768503|Cytophagia	976|Bacteroidetes	P	Reversible hydration of carbon dioxide	-	-	4.2.1.1	ko:K01673	ko00910,map00910	-	R00132,R10092	RC02807	ko00000,ko00001,ko01000	-	-	-	Pro_CA
DYD3_k127_3582570_1	886293.Sinac_0781	1.963e-40	159.0	COG3619@1|root,COG3619@2|Bacteria,2J3C2@203682|Planctomycetes	203682|Planctomycetes	S	Protein of unknown function (DUF1275)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1275
DYD3_k127_3582570_2	1121033.AUCF01000005_gene5295	3.7e-08	61.0	2CTAY@1|root,32ST0@2|Bacteria,1N57M@1224|Proteobacteria,2UDXZ@28211|Alphaproteobacteria,2JTMY@204441|Rhodospirillales	204441|Rhodospirillales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_3598480_12	291985.CCSI01000001_gene2157	6.56e-34	138.0	COG2258@1|root,COG2258@2|Bacteria,1RAPM@1224|Proteobacteria,2U5IG@28211|Alphaproteobacteria,2K3XH@204457|Sphingomonadales	204457|Sphingomonadales	S	protein conserved in bacteria	-	-	-	-	-	-	-	-	-	-	-	-	3-alpha,MOSC
DYD3_k127_3598480_7	536019.Mesop_0598	9.137e-78	268.0	COG2162@1|root,COG2162@2|Bacteria,1RDF3@1224|Proteobacteria,2U7QG@28211|Alphaproteobacteria,43MTI@69277|Phyllobacteriaceae	28211|Alphaproteobacteria	Q	Belongs to the arylamine N-acetyltransferase family	nat	-	2.3.1.118	ko:K00675	-	-	-	-	ko00000,ko01000	-	-	-	Acetyltransf_2
DYD3_k127_3598480_4	765869.BDW_04205	5.71e-100	335.0	COG2855@1|root,COG2855@2|Bacteria,1MVIP@1224|Proteobacteria,42P59@68525|delta/epsilon subdivisions,2MTMW@213481|Bdellovibrionales,2WJUJ@28221|Deltaproteobacteria	213481|Bdellovibrionales	S	Conserved hypothetical protein 698	-	-	-	-	-	-	-	-	-	-	-	-	Cons_hypoth698
DYD3_k127_3598480_17	546262.NEICINOT_04665	4.62e-12	78.0	COG0607@1|root,COG0607@2|Bacteria,1NGN9@1224|Proteobacteria,2VUUZ@28216|Betaproteobacteria,2KRW2@206351|Neisseriales	206351|Neisseriales	P	Rhodanese Homology Domain	-	-	-	ko:K03972	-	-	-	-	ko00000	-	-	-	Rhodanese
DYD3_k127_3598480_1	1122225.AULQ01000006_gene1143	1.079e-103	351.0	COG2259@1|root,COG2259@2|Bacteria,4NFR6@976|Bacteroidetes,1HZI7@117743|Flavobacteriia	976|Bacteroidetes	S	Quinol oxidase	-	-	1.8.5.2	ko:K16936,ko:K16937	ko00920,ko01120,map00920,map01120	-	R07177	-	ko00000,ko00001,ko01000	3.D.4.9	-	-	DoxA,DoxD
DYD3_k127_3598480_19	608506.COB47_2237	6.66e-07	58.0	COG0640@1|root,COG0640@2|Bacteria,1V6CU@1239|Firmicutes,24R9E@186801|Clostridia,42H4C@68295|Thermoanaerobacterales	186801|Clostridia	K	PFAM regulatory protein, ArsR	-	-	-	ko:K03892,ko:K21903	-	-	-	-	ko00000,ko03000	-	-	-	HTH_5
DYD3_k127_3598480_11	1038922.PflQ2_4309	1.205e-55	198.0	COG4807@1|root,COG4807@2|Bacteria,1RD33@1224|Proteobacteria,1S2XV@1236|Gammaproteobacteria,1YNWS@136843|Pseudomonas fluorescens group	1236|Gammaproteobacteria	S	Protein of unknown function (DUF1456)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1456
DYD3_k127_3598480_8	1388763.O165_012305	2.252e-74	253.0	COG1280@1|root,COG1280@2|Bacteria,1MWA1@1224|Proteobacteria,1RPAI@1236|Gammaproteobacteria,1YVW6@136845|Pseudomonas putida group	1236|Gammaproteobacteria	E	LysE type translocator	-	-	-	-	-	-	-	-	-	-	-	-	LysE
DYD3_k127_3598480_10	1157490.EL26_03640	2.529e-58	212.0	COG0451@1|root,COG0451@2|Bacteria,1TR3K@1239|Firmicutes,4HD3P@91061|Bacilli	91061|Bacilli	GM	Dehydratase	-	-	-	-	-	-	-	-	-	-	-	-	Epimerase
DYD3_k127_3598480_14	861530.ALOZ01000075_gene1338	3.21e-24	111.0	COG4195@1|root,COG4195@2|Bacteria,1VBQ5@1239|Firmicutes,4HK5Q@91061|Bacilli,4GYTT@90964|Staphylococcaceae	91061|Bacilli	S	Poly-gamma-glutamate hydrolase	ymaC	-	-	-	-	-	-	-	-	-	-	-	Gamma_PGA_hydro
DYD3_k127_3598480_18	1380347.JNII01000008_gene4027	1.008e-08	62.0	COG3631@1|root,COG5485@1|root,COG3631@2|Bacteria,COG5485@2|Bacteria,2INPT@201174|Actinobacteria,4ETGU@85013|Frankiales	2|Bacteria	S	SnoaL-like polyketide cyclase	-	-	-	ko:K06893	-	-	-	-	ko00000	-	-	-	SnoaL,SnoaL_2
DYD3_k127_3598480_0	1184267.A11Q_234	2.575e-126	407.0	COG1028@1|root,COG1028@2|Bacteria,1MU73@1224|Proteobacteria,42YCG@68525|delta/epsilon subdivisions,2MTYR@213481|Bdellovibrionales,2WU9H@28221|Deltaproteobacteria	213481|Bdellovibrionales	IQ	Dehydrogenase reductase	-	-	-	-	-	-	-	-	-	-	-	-	adh_short_C2
DYD3_k127_3598480_3	862908.BMS_2112	1.604e-102	345.0	COG2220@1|root,COG2220@2|Bacteria,1MV20@1224|Proteobacteria,42QPP@68525|delta/epsilon subdivisions,2MTXU@213481|Bdellovibrionales,2X5P5@28221|Deltaproteobacteria	213481|Bdellovibrionales	S	Beta-lactamase superfamily domain	-	-	-	-	-	-	-	-	-	-	-	-	Lactamase_B_2
DYD3_k127_3598480_2	1184267.A11Q_233	2.647e-103	347.0	COG4977@1|root,COG4977@2|Bacteria,1QTV9@1224|Proteobacteria,43CQR@68525|delta/epsilon subdivisions,2X7Y7@28221|Deltaproteobacteria	28221|Deltaproteobacteria	K	AraC-type transcriptional regulator N-terminus	-	-	-	-	-	-	-	-	-	-	-	-	AraC_N,HTH_18
DYD3_k127_3598480_6	862908.BMS_3057	8.583e-90	309.0	COG0564@1|root,COG0564@2|Bacteria,1MVDX@1224|Proteobacteria,43B0D@68525|delta/epsilon subdivisions,2WRKF@28221|Deltaproteobacteria	28221|Deltaproteobacteria	J	Responsible for synthesis of pseudouridine from uracil	-	-	5.4.99.23	ko:K06180	-	-	-	-	ko00000,ko01000,ko03009	-	-	-	PseudoU_synth_2
DYD3_k127_3598480_9	1353529.M899_3184	3.844e-67	236.0	COG0561@1|root,COG0561@2|Bacteria,1R4WX@1224|Proteobacteria,42P98@68525|delta/epsilon subdivisions,2MTAY@213481|Bdellovibrionales,2WJWW@28221|Deltaproteobacteria	213481|Bdellovibrionales	S	hydrolases of the HAD superfamily	-	-	-	-	-	-	-	-	-	-	-	-	Hydrolase_3
DYD3_k127_3598480_13	867902.Ornrh_1932	8.143e-34	138.0	2BXI0@1|root,2Z9A2@2|Bacteria,4NFDQ@976|Bacteroidetes,1I0GE@117743|Flavobacteriia	976|Bacteroidetes	S	Protein of unknown function (DUF2459)	-	-	-	-	-	-	-	-	-	-	-	-	DUF2459
DYD3_k127_3598480_5	1353529.M899_3185	7.587e-91	312.0	COG0564@1|root,COG0564@2|Bacteria,1MVJ5@1224|Proteobacteria,42MDF@68525|delta/epsilon subdivisions,2X6EH@28221|Deltaproteobacteria	28221|Deltaproteobacteria	J	Responsible for synthesis of pseudouridine from uracil	-	-	5.4.99.23	ko:K06180	-	-	-	-	ko00000,ko01000,ko03009	-	-	-	PseudoU_synth_2
DYD3_k127_3598480_21	1382358.JHVN01000002_gene2339	4.049e-05	55.0	COG1028@1|root,COG1028@2|Bacteria,1TP76@1239|Firmicutes,4HAA6@91061|Bacilli,21W76@150247|Anoxybacillus	91061|Bacilli	IQ	Enoyl-(Acyl carrier protein) reductase	-	-	-	-	-	-	-	-	-	-	-	-	adh_short,adh_short_C2
DYD3_k127_3606118_0	1120965.AUBV01000015_gene1058	3.639e-09	69.0	COG5337@1|root,COG5337@2|Bacteria,4P3EE@976|Bacteroidetes	976|Bacteroidetes	M	CotH kinase protein	-	-	-	ko:K06330	-	-	-	-	ko00000	-	-	-	CotH
DYD3_k127_3619354_7	983920.Y88_3304	2.679e-18	85.0	COG1804@1|root,COG1804@2|Bacteria,1MU2K@1224|Proteobacteria,2TR7Q@28211|Alphaproteobacteria	28211|Alphaproteobacteria	C	L-carnitine dehydratase bile acid-inducible protein F	-	-	2.8.3.19	ko:K18702	-	-	-	-	ko00000,ko01000	-	-	-	CoA_transf_3
DYD3_k127_3619354_0	1353529.M899_0217	1.048e-272	848.0	COG0843@1|root,COG0843@2|Bacteria,1MU7S@1224|Proteobacteria,42M18@68525|delta/epsilon subdivisions,2MSS3@213481|Bdellovibrionales,2WJUK@28221|Deltaproteobacteria	213481|Bdellovibrionales	C	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B	ctaD	-	1.9.3.1	ko:K02274	ko00190,ko01100,map00190,map01100	M00155	R00081	RC00016	ko00000,ko00001,ko00002,ko01000	3.D.4.2,3.D.4.3,3.D.4.4,3.D.4.6	-	-	COX1
DYD3_k127_3619354_2	1353529.M899_0216	2.93e-101	337.0	COG1622@1|root,COG1622@2|Bacteria,1MVYW@1224|Proteobacteria,42R2B@68525|delta/epsilon subdivisions,2MT7K@213481|Bdellovibrionales,2WN74@28221|Deltaproteobacteria	213481|Bdellovibrionales	C	Cytochrome c oxidase subunit	-	-	1.9.3.1	ko:K02275	ko00190,ko01100,map00190,map01100	M00155	R00081	RC00016	ko00000,ko00001,ko00002,ko01000	3.D.4.2,3.D.4.4,3.D.4.6	-	-	COX2
DYD3_k127_3619354_4	862908.BMS_0218	3.304e-84	301.0	COG0109@1|root,COG1612@1|root,COG0109@2|Bacteria,COG1612@2|Bacteria,1MW3S@1224|Proteobacteria,42TVJ@68525|delta/epsilon subdivisions,2MT8W@213481|Bdellovibrionales,2X5CE@28221|Deltaproteobacteria	213481|Bdellovibrionales	H	Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group	ctaB	GO:0003674,GO:0003824,GO:0004311,GO:0004659,GO:0005575,GO:0005623,GO:0005886,GO:0006091,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0008495,GO:0009058,GO:0009987,GO:0015980,GO:0016020,GO:0016740,GO:0016765,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0044464,GO:0045333,GO:0046148,GO:0046483,GO:0051186,GO:0051188,GO:0055114,GO:0071704,GO:0071944,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576	2.5.1.141	ko:K02257	ko00190,ko00860,ko01100,ko01110,ko04714,map00190,map00860,map01100,map01110,map04714	M00154	R07411	RC01786	ko00000,ko00001,ko00002,ko01000,ko01006,ko03029	-	-	-	COX15-CtaA,UbiA
DYD3_k127_3619354_5	1403819.BATR01000098_gene3260	5.154e-44	164.0	COG2322@1|root,COG2322@2|Bacteria,46SZT@74201|Verrucomicrobia,2IUT2@203494|Verrucomicrobiae	203494|Verrucomicrobiae	S	Protein of unknown function (DUF420)	-	-	-	-	-	-	-	-	-	-	-	-	DUF420
DYD3_k127_3619354_3	1353529.M899_0209	2.628e-84	284.0	COG1845@1|root,COG1845@2|Bacteria,1MUCK@1224|Proteobacteria,42RCU@68525|delta/epsilon subdivisions,2MT7P@213481|Bdellovibrionales,2WMXY@28221|Deltaproteobacteria	213481|Bdellovibrionales	C	Cytochrome c oxidase, subunit III	coxC	-	1.9.3.1	ko:K02276,ko:K02299	ko00190,ko01100,map00190,map01100	M00155,M00417	R00081	RC00016	ko00000,ko00001,ko00002,ko01000	3.D.4.4,3.D.4.5,3.D.4.6	-	-	COX3
DYD3_k127_3619354_6	1538295.JY96_11020	1.804e-29	120.0	COG0724@1|root,COG0724@2|Bacteria,1N6VR@1224|Proteobacteria,2VRC4@28216|Betaproteobacteria,1KKP8@119065|unclassified Burkholderiales	28216|Betaproteobacteria	S	RNA-binding protein	-	-	-	-	-	-	-	-	-	-	-	-	RRM_1
DYD3_k127_3619354_1	1046714.AMRX01000008_gene1206	1.52e-214	680.0	COG1944@1|root,COG1944@2|Bacteria,1MV7K@1224|Proteobacteria,1RN47@1236|Gammaproteobacteria,464WG@72275|Alteromonadaceae	1236|Gammaproteobacteria	O	redox protein, regulator of disulfide bond formation	ycaO	GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0018193,GO:0018197,GO:0018198,GO:0018339,GO:0019538,GO:0036211,GO:0043167,GO:0043169,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0046872,GO:0047429,GO:0047693,GO:0071704,GO:1901564	-	ko:K09136	-	-	-	-	ko00000,ko03009	-	-	-	OsmC,YcaO
DYD3_k127_3619354_9	1336208.JADY01000008_gene2126	1.177e-07	61.0	COG1042@1|root,COG1670@1|root,COG1042@2|Bacteria,COG1670@2|Bacteria,1MW98@1224|Proteobacteria,2TR24@28211|Alphaproteobacteria,2JPV8@204441|Rhodospirillales	204441|Rhodospirillales	C	COG1042 Acyl-CoA synthetase (NDP forming)	yfiQ	-	-	ko:K09181	-	-	-	-	ko00000	-	-	-	ATP-grasp_5,Acetyltransf_1,Acetyltransf_3,CoA_binding_2,Succ_CoA_lig
DYD3_k127_3629276_1	390989.JOEG01000017_gene6230	2.842e-84	289.0	COG2141@1|root,COG2141@2|Bacteria,2GJ66@201174|Actinobacteria,4D8IY@85008|Micromonosporales	201174|Actinobacteria	C	Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases	-	-	-	-	-	-	-	-	-	-	-	-	Bac_luciferase
DYD3_k127_3629276_0	1403819.BATR01000094_gene2929	5.799e-169	536.0	COG1902@1|root,COG1902@2|Bacteria,46SGZ@74201|Verrucomicrobia,2ITH2@203494|Verrucomicrobiae	203494|Verrucomicrobiae	C	NADH:flavin oxidoreductase / NADH oxidase family	-	-	-	-	-	-	-	-	-	-	-	-	Oxidored_FMN
DYD3_k127_3629276_2	1184267.A11Q_1570	5.993e-18	87.0	COG1959@1|root,COG1959@2|Bacteria,1N1AX@1224|Proteobacteria,43DNW@68525|delta/epsilon subdivisions,2MTET@213481|Bdellovibrionales,2WT2X@28221|Deltaproteobacteria	213481|Bdellovibrionales	K	Transcriptional regulator	-	-	-	-	-	-	-	-	-	-	-	-	Rrf2
DYD3_k127_3633142_7	1201288.M900_0676	1.88e-60	211.0	COG1868@1|root,COG1868@2|Bacteria,1MX01@1224|Proteobacteria,42N2Y@68525|delta/epsilon subdivisions,2MSQM@213481|Bdellovibrionales,2WIS2@28221|Deltaproteobacteria	213481|Bdellovibrionales	N	flagellar motor switch protein FliM	fliM	-	-	ko:K02416	ko02030,ko02040,map02030,map02040	-	-	-	ko00000,ko00001,ko02035	-	-	-	FliM,FliMN_C
DYD3_k127_3633142_9	1201288.M900_0677	1.742e-51	184.0	COG1886@1|root,COG1886@2|Bacteria,1RGWT@1224|Proteobacteria,42TQB@68525|delta/epsilon subdivisions,2MT4T@213481|Bdellovibrionales,2WQCQ@28221|Deltaproteobacteria	213481|Bdellovibrionales	N	Flagellar motor switch protein FliN	fliN	-	-	ko:K02417	ko02030,ko02040,map02030,map02040	-	-	-	ko00000,ko00001,ko02035,ko02044	3.A.6.2,3.A.6.3	-	-	FliMN_C
DYD3_k127_3633142_8	862908.BMS_0558	5.272e-53	201.0	COG3190@1|root,COG3190@2|Bacteria	2|Bacteria	N	flagellar	fliZ	-	-	ko:K02418	ko02040,map02040	-	-	-	ko00000,ko00001,ko02035,ko02044	3.A.6.2	-	-	FliO
DYD3_k127_3633142_4	862908.BMS_0559	7.179e-106	348.0	COG1338@1|root,COG1338@2|Bacteria,1MVBU@1224|Proteobacteria,42NDZ@68525|delta/epsilon subdivisions,2MSWI@213481|Bdellovibrionales,2WKCN@28221|Deltaproteobacteria	213481|Bdellovibrionales	N	Plays a role in the flagellum-specific transport system	fliP	-	-	ko:K02419	ko02040,map02040	-	-	-	ko00000,ko00001,ko02035,ko02044	3.A.6.2	-	-	FliP
DYD3_k127_3633142_10	862908.BMS_0560	9.63e-25	106.0	COG1987@1|root,COG1987@2|Bacteria,1N73W@1224|Proteobacteria,42VAB@68525|delta/epsilon subdivisions,2MTE3@213481|Bdellovibrionales,2WR6X@28221|Deltaproteobacteria	213481|Bdellovibrionales	N	Flagellar biosynthetic protein FliQ	fliQ	-	-	ko:K02420,ko:K03227	ko02040,ko03070,map02040,map03070	M00332,M00542,M00660	-	-	ko00000,ko00001,ko00002,ko02035,ko02044	3.A.6.1,3.A.6.2,3.A.6.3	-	-	Bac_export_3
DYD3_k127_3633142_5	862908.BMS_0561	2.709e-88	298.0	COG1684@1|root,COG1684@2|Bacteria,1NIF4@1224|Proteobacteria,42NX7@68525|delta/epsilon subdivisions,2MTEQ@213481|Bdellovibrionales,2WQ35@28221|Deltaproteobacteria	213481|Bdellovibrionales	N	flagellar biosynthetic protein FliR	fliR	-	-	ko:K02421	ko02040,map02040	-	-	-	ko00000,ko00001,ko02035,ko02044	3.A.6.2	-	-	Bac_export_1
DYD3_k127_3633142_2	1353529.M899_2982	5.261e-126	412.0	COG1377@1|root,COG1377@2|Bacteria,1MUWI@1224|Proteobacteria,42NKR@68525|delta/epsilon subdivisions,2MSWN@213481|Bdellovibrionales,2WJIQ@28221|Deltaproteobacteria	213481|Bdellovibrionales	N	Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin	flhB	-	-	ko:K02401	ko02040,map02040	-	-	-	ko00000,ko00001,ko02035,ko02044	3.A.6.2	-	-	Bac_export_2
DYD3_k127_3633142_0	1353529.M899_2981	0.0	1012.0	COG1298@1|root,COG1298@2|Bacteria,1MUF3@1224|Proteobacteria,42NB2@68525|delta/epsilon subdivisions,2MSSM@213481|Bdellovibrionales,2WIWG@28221|Deltaproteobacteria	213481|Bdellovibrionales	N	Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin	flhA	-	-	ko:K02400	ko02040,map02040	-	-	-	ko00000,ko00001,ko02035,ko02044	3.A.6.2,3.A.6.3	-	-	FHIPEP
DYD3_k127_3633142_3	1353529.M899_2980	3.281e-111	377.0	COG1419@1|root,COG1419@2|Bacteria,1MUQW@1224|Proteobacteria,42NBF@68525|delta/epsilon subdivisions,2MTD1@213481|Bdellovibrionales,2WNW9@28221|Deltaproteobacteria	213481|Bdellovibrionales	N	PFAM GTP-binding signal recognition particle SRP54 G- domain	flhF	-	-	ko:K02404	-	-	-	-	ko00000,ko02035	-	-	-	SRP54
DYD3_k127_3633142_6	862908.BMS_0565	1.446e-84	290.0	COG0455@1|root,COG0455@2|Bacteria,1R8IW@1224|Proteobacteria,42PF7@68525|delta/epsilon subdivisions,2MTBQ@213481|Bdellovibrionales,2WJB5@28221|Deltaproteobacteria	213481|Bdellovibrionales	D	Belongs to the ParA family	-	-	-	ko:K04562	-	-	-	-	ko00000,ko02035	-	-	-	AAA_31,CbiA,ParA
DYD3_k127_3633142_1	1353529.M899_2978	7.762e-129	415.0	COG1191@1|root,COG1191@2|Bacteria,1MWEU@1224|Proteobacteria,42QQ8@68525|delta/epsilon subdivisions,2MSNG@213481|Bdellovibrionales,2WMX3@28221|Deltaproteobacteria	213481|Bdellovibrionales	K	Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released	fliA	-	-	ko:K02405	ko02020,ko02025,ko02026,ko02040,ko05111,map02020,map02025,map02026,map02040,map05111	-	-	-	ko00000,ko00001,ko02035,ko03021	-	-	-	Sigma70_r2,Sigma70_r3,Sigma70_r4
DYD3_k127_364743_0	1201288.M900_2487	2.89e-202	636.0	COG1219@1|root,COG1219@2|Bacteria,1MVQK@1224|Proteobacteria,42MWJ@68525|delta/epsilon subdivisions,2MSTX@213481|Bdellovibrionales,2WJ8Q@28221|Deltaproteobacteria	213481|Bdellovibrionales	O	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP	clpX	GO:0000166,GO:0003674,GO:0003824,GO:0004176,GO:0005488,GO:0005524,GO:0006508,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008233,GO:0009056,GO:0009057,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0019538,GO:0030163,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0042623,GO:0043167,GO:0043168,GO:0043170,GO:0044238,GO:0051301,GO:0070011,GO:0071704,GO:0097159,GO:0097367,GO:0140096,GO:1901265,GO:1901363,GO:1901564,GO:1901565,GO:1901575	-	ko:K03544	ko04112,map04112	-	-	-	ko00000,ko00001,ko03110	-	-	-	AAA_2,ClpB_D2-small,zf-C4_ClpX
DYD3_k127_364743_3	1201288.M900_2488	1.068e-98	325.0	COG0740@1|root,COG0740@2|Bacteria,1MV46@1224|Proteobacteria,42MFU@68525|delta/epsilon subdivisions,2MSVC@213481|Bdellovibrionales,2WK74@28221|Deltaproteobacteria	213481|Bdellovibrionales	O	Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins	clpP	-	3.4.21.92	ko:K01358	ko04112,ko04212,map04112,map04212	-	-	-	ko00000,ko00001,ko01000,ko01002	-	-	-	CLP_protease
DYD3_k127_364743_4	862908.BMS_2642	5.708e-86	287.0	COG0450@1|root,COG0450@2|Bacteria,1MWPY@1224|Proteobacteria,42MAJ@68525|delta/epsilon subdivisions,2MU0S@213481|Bdellovibrionales,2WNT4@28221|Deltaproteobacteria	213481|Bdellovibrionales	O	PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen	prx-2	-	1.11.1.15	ko:K03386,ko:K20011	ko04214,map04214	-	-	-	ko00000,ko00001,ko01000,ko04147	-	-	-	1-cysPrx_C,AhpC-TSA
DYD3_k127_364743_6	1123517.JOMR01000001_gene494	8.322e-64	222.0	COG0783@1|root,COG0783@2|Bacteria,1RAC5@1224|Proteobacteria,1S2H7@1236|Gammaproteobacteria,461ZN@72273|Thiotrichales	72273|Thiotrichales	P	Belongs to the Dps family	-	-	-	ko:K04047	-	-	-	-	ko00000,ko03036	-	-	-	Ferritin
DYD3_k127_364743_9	215803.DB30_5083	9.201e-39	159.0	COG0642@1|root,COG2205@2|Bacteria,1NRP8@1224|Proteobacteria,42Z45@68525|delta/epsilon subdivisions,2WTWB@28221|Deltaproteobacteria,2YW9J@29|Myxococcales	28221|Deltaproteobacteria	T	Histidine kinase	-	-	-	-	-	-	-	-	-	-	-	-	GAF,HAMP,HATPase_c,HisKA,PAS_4
DYD3_k127_364743_14	156889.Mmc1_1510	3.874e-06	53.0	COG2198@1|root,COG2198@2|Bacteria,1NJUT@1224|Proteobacteria	1224|Proteobacteria	T	PFAM Hpt domain protein	-	-	-	-	-	-	-	-	-	-	-	-	Hpt
DYD3_k127_364743_1	1201290.M902_2197	9.299e-187	593.0	COG1875@1|root,COG1875@2|Bacteria,1MUX1@1224|Proteobacteria,42MK9@68525|delta/epsilon subdivisions,2MSRB@213481|Bdellovibrionales,2WJ1C@28221|Deltaproteobacteria	213481|Bdellovibrionales	T	SMART Nucleotide binding protein, PINc	phoH1	-	-	ko:K07175	-	-	-	-	ko00000	-	-	-	PIN_4,PhoH
DYD3_k127_364743_5	1201288.M900_2495	1.101e-67	244.0	2DRY6@1|root,33DN5@2|Bacteria,1P33Z@1224|Proteobacteria,4321Q@68525|delta/epsilon subdivisions,2MT6Z@213481|Bdellovibrionales,2WWZK@28221|Deltaproteobacteria	213481|Bdellovibrionales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_364743_2	1353529.M899_2655	2.773e-144	467.0	COG0436@1|root,COG0436@2|Bacteria,1MW0Z@1224|Proteobacteria,42MKR@68525|delta/epsilon subdivisions,2MSYT@213481|Bdellovibrionales,2WIS3@28221|Deltaproteobacteria	213481|Bdellovibrionales	E	PFAM Aminotransferase class I and II	-	-	2.6.1.1	ko:K00812	ko00220,ko00250,ko00270,ko00330,ko00350,ko00360,ko00400,ko00401,ko00950,ko00960,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map00250,map00270,map00330,map00350,map00360,map00400,map00401,map00950,map00960,map01100,map01110,map01130,map01210,map01230	-	R00355,R00694,R00734,R00896,R02433,R02619,R05052	RC00006	ko00000,ko00001,ko01000,ko01007	-	-	-	Aminotran_1_2
DYD3_k127_364743_8	862908.BMS_2650	3.647e-61	214.0	COG0669@1|root,COG0669@2|Bacteria,1RD9F@1224|Proteobacteria,42RJQ@68525|delta/epsilon subdivisions,2MT32@213481|Bdellovibrionales,2WNDS@28221|Deltaproteobacteria	213481|Bdellovibrionales	H	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate	coaD	GO:0003674,GO:0003824,GO:0004595,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006732,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0015936,GO:0015937,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0033865,GO:0033866,GO:0033875,GO:0034030,GO:0034032,GO:0034033,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046390,GO:0046483,GO:0051186,GO:0051188,GO:0055086,GO:0070566,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576	2.7.7.3	ko:K00954	ko00770,ko01100,map00770,map01100	M00120	R03035	RC00002	ko00000,ko00001,ko00002,ko01000	-	-	-	CTP_transf_like
DYD3_k127_364743_11	862908.BMS_2651	2.474e-37	147.0	COG0742@1|root,COG0742@2|Bacteria,1MXKW@1224|Proteobacteria,42U1F@68525|delta/epsilon subdivisions,2MTE9@213481|Bdellovibrionales,2WQQM@28221|Deltaproteobacteria	213481|Bdellovibrionales	L	Methyltransferase	-	-	2.1.1.171	ko:K08316	-	-	R07234	RC00003	ko00000,ko01000,ko03009	-	-	-	Cons_hypoth95
DYD3_k127_3654033_5	1201288.M900_1259	9.541e-15	80.0	COG0316@1|root,COG0316@2|Bacteria	2|Bacteria	S	protein maturation	-	-	-	ko:K13628,ko:K15724	-	-	-	-	ko00000,ko03016	-	-	-	Fe-S_biosyn
DYD3_k127_3654033_1	1353529.M899_2179	8.23e-201	640.0	COG3975@1|root,COG3975@2|Bacteria,1MUHZ@1224|Proteobacteria,42YBA@68525|delta/epsilon subdivisions,2WUP5@28221|Deltaproteobacteria	28221|Deltaproteobacteria	S	Peptidase, M61	-	-	-	-	-	-	-	-	-	-	-	-	PDZ_2,Peptidase_M61
DYD3_k127_3654033_4	1201288.M900_1255	2.575e-15	83.0	COG2977@1|root,COG2977@2|Bacteria	2|Bacteria	Q	Belongs to the P-Pant transferase superfamily	sfp3	-	6.3.2.14	ko:K02362,ko:K06133	ko00770,ko01053,ko01110,ko01130,map00770,map01053,map01110,map01130	-	R01625,R07644	RC00002,RC00162,RC03046	ko00000,ko00001,ko01000	-	-	-	ACPS
DYD3_k127_3654033_0	1353529.M899_2170	1.663e-278	874.0	COG3968@1|root,COG3968@2|Bacteria,1QUKF@1224|Proteobacteria,42PBH@68525|delta/epsilon subdivisions,2MTCD@213481|Bdellovibrionales,2WJZG@28221|Deltaproteobacteria	213481|Bdellovibrionales	S	Glutamine synthetase, catalytic region	glnN	-	6.3.1.2	ko:K01915	ko00220,ko00250,ko00630,ko00910,ko01100,ko01120,ko01230,ko02020,ko04217,ko04724,ko04727,map00220,map00250,map00630,map00910,map01100,map01120,map01230,map02020,map04217,map04724,map04727	-	R00253	RC00010,RC02798	ko00000,ko00001,ko01000,ko04147	-	-	-	GSIII_N,Gln-synt_C
DYD3_k127_3654033_2	1254432.SCE1572_40290	1.563e-126	430.0	COG3055@1|root,COG3055@2|Bacteria,1Q4PQ@1224|Proteobacteria,4347S@68525|delta/epsilon subdivisions,2X34Y@28221|Deltaproteobacteria,2YUAC@29|Myxococcales	28221|Deltaproteobacteria	V	Kelch motif	-	-	-	-	-	-	-	-	-	-	-	-	Kelch_1,Kelch_4,TSP_3
DYD3_k127_3654033_3	448385.sce6854	9.153e-74	267.0	COG3055@1|root,COG3055@2|Bacteria,1Q4PQ@1224|Proteobacteria,4347S@68525|delta/epsilon subdivisions,2X34Y@28221|Deltaproteobacteria,2YUAC@29|Myxococcales	28221|Deltaproteobacteria	V	Kelch motif	-	-	-	-	-	-	-	-	-	-	-	-	Kelch_1,Kelch_4,TSP_3
DYD3_k127_366222_4	1353529.M899_1590	1.75e-100	335.0	COG0501@1|root,COG0501@2|Bacteria,1NF76@1224|Proteobacteria,42WFB@68525|delta/epsilon subdivisions,2MTHK@213481|Bdellovibrionales,2WSAI@28221|Deltaproteobacteria	213481|Bdellovibrionales	O	Belongs to the peptidase M48B family	-	-	-	-	-	-	-	-	-	-	-	-	Peptidase_M48
DYD3_k127_366222_5	1121898.Q766_13035	1.015e-84	290.0	COG0679@1|root,COG0679@2|Bacteria,4NIQF@976|Bacteroidetes,1I08Z@117743|Flavobacteriia,2NS99@237|Flavobacterium	976|Bacteroidetes	S	Transporter	-	-	-	ko:K07088	-	-	-	-	ko00000	-	-	-	Mem_trans
DYD3_k127_366222_1	575564.HMPREF0014_01186	3.341e-153	490.0	COG1816@1|root,COG1816@2|Bacteria,1MWBV@1224|Proteobacteria,1RNVI@1236|Gammaproteobacteria,3NJMF@468|Moraxellaceae	1236|Gammaproteobacteria	F	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism	add	-	3.5.4.2,3.5.4.4	ko:K01488,ko:K21053	ko00230,ko01100,ko05340,map00230,map01100,map05340	-	R01244,R01560,R02556	RC00477	ko00000,ko00001,ko01000	-	-	-	A_deaminase
DYD3_k127_366222_2	761193.Runsl_2950	1.21e-128	422.0	COG2252@1|root,COG2252@2|Bacteria,4NGCG@976|Bacteroidetes,47NEQ@768503|Cytophagia	976|Bacteroidetes	S	Permease family	yieG	-	-	ko:K06901	-	-	-	-	ko00000,ko02000	2.A.1.40	-	-	Xan_ur_permease
DYD3_k127_366222_3	264462.Bd2633	1.119e-107	365.0	COG4630@1|root,COG4630@2|Bacteria,1MWI1@1224|Proteobacteria,43E4Q@68525|delta/epsilon subdivisions,2MTP3@213481|Bdellovibrionales,2X7E4@28221|Deltaproteobacteria	213481|Bdellovibrionales	C	CO dehydrogenase flavoprotein C-terminal domain	xdhA	-	1.17.1.4	ko:K13481	ko00230,ko01100,ko01120,map00230,map01100,map01120	M00546	R01768,R02103	RC00143	ko00000,ko00001,ko00002,ko01000	-	-	-	CO_deh_flav_C,FAD_binding_5,Fer2,Fer2_2
DYD3_k127_366222_0	862908.BMS_2856	3.359e-249	793.0	COG4631@1|root,COG4631@2|Bacteria,1NQSR@1224|Proteobacteria,43C3C@68525|delta/epsilon subdivisions,2MTI8@213481|Bdellovibrionales,2X7DZ@28221|Deltaproteobacteria	213481|Bdellovibrionales	C	Xanthine dehydrogenase	xdhB	-	1.17.1.4	ko:K13482	ko00230,ko01100,ko01120,map00230,map01100,map01120	M00546	R01768,R02103	RC00143	ko00000,ko00001,ko00002,ko01000	-	-	-	Ald_Xan_dh_C,Ald_Xan_dh_C2,CO_deh_flav_C,FAD_binding_5,Fer2,Fer2_2
DYD3_k127_366222_6	264462.Bd2635	2.602e-28	119.0	COG1975@1|root,COG1975@2|Bacteria,1R3RT@1224|Proteobacteria,43BHQ@68525|delta/epsilon subdivisions,2MTVP@213481|Bdellovibrionales,2X6W7@28221|Deltaproteobacteria	213481|Bdellovibrionales	O	XdhC Rossmann domain	pcmU	-	-	ko:K07402	-	-	-	-	ko00000	-	-	-	XdhC_C,XdhC_CoxI
DYD3_k127_366602_10	246194.CHY_2459	4.9e-70	246.0	COG1171@1|root,COG1171@2|Bacteria,1TP22@1239|Firmicutes,248D5@186801|Clostridia,42FCX@68295|Thermoanaerobacterales	186801|Clostridia	E	Threonine dehydratase	ilvA	-	4.3.1.19	ko:K01754	ko00260,ko00290,ko01100,ko01110,ko01130,ko01200,ko01230,map00260,map00290,map01100,map01110,map01130,map01200,map01230	M00570	R00220,R00996	RC00418,RC02600	ko00000,ko00001,ko00002,ko01000	-	-	-	ACT,PALP
DYD3_k127_366602_22	1449345.JHWC01000006_gene1042	3.999e-15	82.0	COG1971@1|root,COG1971@2|Bacteria,1NWBY@1224|Proteobacteria,42RE2@68525|delta/epsilon subdivisions	1224|Proteobacteria	P	Probably functions as a manganese efflux pump	mntP	-	-	-	-	-	-	-	-	-	-	-	Mntp
DYD3_k127_366602_9	1353529.M899_0214	1.207e-70	250.0	COG1612@1|root,COG1612@2|Bacteria,1Q99Q@1224|Proteobacteria,430B1@68525|delta/epsilon subdivisions,2MTC1@213481|Bdellovibrionales,2WVQ9@28221|Deltaproteobacteria	213481|Bdellovibrionales	O	Cytochrome oxidase assembly protein	-	-	-	ko:K02259	ko00190,ko00860,ko01100,ko01110,ko02020,ko04714,map00190,map00860,map01100,map01110,map02020,map04714	M00154	R07412	RC00769	ko00000,ko00001,ko00002,ko03029	3.D.4.4	-	-	COX15-CtaA
DYD3_k127_366602_16	1049564.TevJSym_aa00730	4.939e-42	160.0	COG0566@1|root,COG0566@2|Bacteria,1Q9ZC@1224|Proteobacteria,1SWHA@1236|Gammaproteobacteria,1JBBP@118884|unclassified Gammaproteobacteria	1236|Gammaproteobacteria	J	SpoU rRNA Methylase family	-	-	-	-	-	-	-	-	-	-	-	-	SpoU_methylase
DYD3_k127_366602_23	1122970.AUHC01000002_gene1323	1.636e-10	69.0	COG2802@1|root,COG2802@2|Bacteria,1NV9N@1224|Proteobacteria,2TQZ4@28211|Alphaproteobacteria,2K0QK@204457|Sphingomonadales	204457|Sphingomonadales	S	to the N-terminal domain of Lon protease	-	-	-	ko:K07157	-	-	-	-	ko00000	-	-	-	LON_substr_bdg
DYD3_k127_366602_13	264462.Bd1657	4.188e-52	205.0	COG4191@1|root,COG4191@2|Bacteria,1RCM9@1224|Proteobacteria,42MC4@68525|delta/epsilon subdivisions,2MSXW@213481|Bdellovibrionales,2WIZU@28221|Deltaproteobacteria	213481|Bdellovibrionales	T	Histidine kinase A domain protein	-	-	-	-	-	-	-	-	-	-	-	-	ABC_sub_bind,HATPase_c,HisKA,PAS_3,PAS_4,PAS_9,Response_reg
DYD3_k127_366602_5	740709.A10D4_06951	8.452e-144	467.0	COG1301@1|root,COG1301@2|Bacteria,1MU0Q@1224|Proteobacteria,1RMEN@1236|Gammaproteobacteria,2QFB7@267893|Idiomarinaceae	1236|Gammaproteobacteria	U	Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family	gltT	-	-	ko:K03309	-	-	-	-	ko00000	2.A.23	-	-	SDF
DYD3_k127_366602_2	1387312.BAUS01000011_gene1877	2.112e-173	551.0	COG0738@1|root,COG0738@2|Bacteria,1MXDC@1224|Proteobacteria,2VN8R@28216|Betaproteobacteria	28216|Betaproteobacteria	G	glucose galactose transporter	gluP	-	-	ko:K02429	-	-	-	-	ko00000,ko02000	2.A.1.7	-	-	MFS_1
DYD3_k127_366602_24	1122605.KB893646_gene131	1.293e-07	63.0	COG0739@1|root,COG0739@2|Bacteria,4NED7@976|Bacteroidetes,1INUW@117747|Sphingobacteriia	976|Bacteroidetes	M	Peptidase, M23	-	-	-	-	-	-	-	-	-	-	-	-	Peptidase_M23
DYD3_k127_366602_25	314275.MADE_1009725	2.422e-06	58.0	2DMIH@1|root,32RT1@2|Bacteria,1RDKU@1224|Proteobacteria,1S562@1236|Gammaproteobacteria,466ZR@72275|Alteromonadaceae	1236|Gammaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_366602_4	1122169.AREN01000022_gene7	7.925e-162	529.0	COG1793@1|root,COG3285@1|root,COG1793@2|Bacteria,COG3285@2|Bacteria,1MVWY@1224|Proteobacteria,1RQ06@1236|Gammaproteobacteria,1JDZ1@118969|Legionellales	118969|Legionellales	L	ATP dependent DNA ligase C terminal region	ykoU	-	6.5.1.1	ko:K01971	ko03450,map03450	-	R00381	RC00005	ko00000,ko00001,ko01000,ko03400	-	-	-	DNA_ligase_A_C,DNA_ligase_A_M,LigD_N
DYD3_k127_366602_11	318996.AXAZ01000012_gene2615	3.651e-62	218.0	COG1793@1|root,COG3285@1|root,COG1793@2|Bacteria,COG3285@2|Bacteria,1MVWY@1224|Proteobacteria,2TRSZ@28211|Alphaproteobacteria,3JR3Z@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	L	DNA ligase	ligD	-	6.5.1.1	ko:K01971	ko03450,map03450	-	R00381	RC00005	ko00000,ko00001,ko01000,ko03400	-	-	-	DNA_ligase_A_C,DNA_ligase_A_M,LigD_N
DYD3_k127_366602_8	264462.Bd2254	2.251e-94	318.0	COG1273@1|root,COG1273@2|Bacteria,1N4UX@1224|Proteobacteria,42RD5@68525|delta/epsilon subdivisions,2WMZ1@28221|Deltaproteobacteria	28221|Deltaproteobacteria	L	With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD	ku	-	-	ko:K10979	ko03450,map03450	-	-	-	ko00000,ko00001,ko03400	-	-	-	Ku
DYD3_k127_366602_7	1487953.JMKF01000022_gene2503	7.836e-120	396.0	COG0673@1|root,COG0673@2|Bacteria,1G18V@1117|Cyanobacteria,1HG44@1150|Oscillatoriales	1117|Cyanobacteria	S	Oxidoreductase family, NAD-binding Rossmann fold	-	-	1.1.1.335,1.1.99.28	ko:K00118,ko:K13020	ko00520,map00520	-	R10140	RC00182	ko00000,ko00001,ko01000,ko01005	-	-	-	GFO_IDH_MocA,GFO_IDH_MocA_C
DYD3_k127_366602_12	1121859.KB890750_gene182	4.582e-59	212.0	COG0693@1|root,COG0693@2|Bacteria,4NQI1@976|Bacteroidetes,47PAI@768503|Cytophagia	976|Bacteroidetes	S	Intracellular protease, PfpI family	-	-	3.5.1.124	ko:K05520	-	-	-	-	ko00000,ko01000,ko01002	-	-	-	DJ-1_PfpI
DYD3_k127_366602_6	448385.sce7806	3.226e-130	441.0	COG0642@1|root,COG3437@1|root,COG2205@2|Bacteria,COG3437@2|Bacteria,1NRP8@1224|Proteobacteria,42RWK@68525|delta/epsilon subdivisions,2WNCS@28221|Deltaproteobacteria,2YWYI@29|Myxococcales	28221|Deltaproteobacteria	T	PAS fold	-	-	-	-	-	-	-	-	-	-	-	-	GAF,HATPase_c,HisKA,PAS_4,PAS_9,Response_reg
DYD3_k127_366602_0	290397.Adeh_4122	0.0	2536.0	COG0784@1|root,COG0840@1|root,COG1511@1|root,COG4251@1|root,COG0784@2|Bacteria,COG0840@2|Bacteria,COG1511@2|Bacteria,COG4251@2|Bacteria,1NC9X@1224|Proteobacteria,43BZ2@68525|delta/epsilon subdivisions,2X79T@28221|Deltaproteobacteria,2YU1H@29|Myxococcales	28221|Deltaproteobacteria	T	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain	-	-	-	-	-	-	-	-	-	-	-	-	GAF_2,HAMP,HATPase_c,HisKA,Response_reg
DYD3_k127_366602_26	1242864.D187_006920	1.324e-05	50.0	COG3682@1|root,COG3682@2|Bacteria,1N6UP@1224|Proteobacteria	1224|Proteobacteria	K	Transcriptional regulator	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_366602_27	215803.DB30_3427	0.0004605	44.0	COG3682@1|root,COG3682@2|Bacteria,1N6UP@1224|Proteobacteria,43DK7@68525|delta/epsilon subdivisions,2X8RD@28221|Deltaproteobacteria,2Z0IP@29|Myxococcales	28221|Deltaproteobacteria	K	Transcriptional regulator	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_366602_21	1123368.AUIS01000006_gene676	1.809e-15	79.0	2C12A@1|root,33B7C@2|Bacteria,1NMUW@1224|Proteobacteria	1224|Proteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_366602_14	927677.ALVU02000001_gene3277	1.224e-47	176.0	COG3871@1|root,COG3871@2|Bacteria,1GBSH@1117|Cyanobacteria	1117|Cyanobacteria	S	Pyridoxamine 5'-phosphate oxidase like	-	-	-	-	-	-	-	-	-	-	-	-	Pyrid_ox_like
DYD3_k127_366602_3	649638.Trad_0088	5.251e-163	517.0	COG1899@1|root,COG1899@2|Bacteria,1WI9Q@1297|Deinococcus-Thermus	1297|Deinococcus-Thermus	O	Deoxyhypusine synthase	-	-	2.5.1.46	ko:K00809	-	-	-	-	ko00000,ko01000	-	-	-	DS
DYD3_k127_366602_1	283942.IL0360	1.057e-173	553.0	COG1816@1|root,COG1816@2|Bacteria,1MWBV@1224|Proteobacteria,1RNVI@1236|Gammaproteobacteria,2QFDG@267893|Idiomarinaceae	1236|Gammaproteobacteria	F	Adenosine deaminase	add	-	3.5.4.4	ko:K01488	ko00230,ko01100,ko05340,map00230,map01100,map05340	-	R01560,R02556	RC00477	ko00000,ko00001,ko01000	-	-	-	A_deaminase
DYD3_k127_366602_19	1353529.M899_2025	1.322e-31	135.0	COG3093@1|root,COG3093@2|Bacteria	2|Bacteria	K	addiction module antidote protein HigA	-	-	-	ko:K07110,ko:K21686	-	-	-	-	ko00000,ko03000	-	-	-	DUF2083,DUF4423,HTH_3,HTH_31,Peptidase_M78
DYD3_k127_366602_18	1443665.JACA01000026_gene3487	3.241e-37	146.0	COG1502@1|root,COG1502@2|Bacteria,4NMXS@976|Bacteroidetes,1I2ID@117743|Flavobacteriia	976|Bacteroidetes	I	ORF6N domain	-	-	-	-	-	-	-	-	-	-	-	-	ORF6N
DYD3_k127_366602_17	862908.BMS_0855	3.119e-41	155.0	COG1231@1|root,COG1231@2|Bacteria,1QWEG@1224|Proteobacteria,43DB9@68525|delta/epsilon subdivisions,2X8H8@28221|Deltaproteobacteria	28221|Deltaproteobacteria	E	Flavin containing amine oxidoreductase	-	-	-	-	-	-	-	-	-	-	-	-	Amino_oxidase
DYD3_k127_3667750_6	862908.BMS_2301	3.146e-24	112.0	COG1057@1|root,COG1057@2|Bacteria	2|Bacteria	H	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)	nadD	-	2.7.7.18,3.6.1.55	ko:K00969,ko:K03574	ko00760,ko01100,map00760,map01100	M00115	R00137,R03005	RC00002	ko00000,ko00001,ko00002,ko01000,ko03400	-	-	-	CTP_transf_like
DYD3_k127_3667750_3	862908.BMS_1011	2.453e-72	252.0	COG1489@1|root,COG1489@2|Bacteria,1MUC3@1224|Proteobacteria,42QXT@68525|delta/epsilon subdivisions,2MT4U@213481|Bdellovibrionales,2WN0R@28221|Deltaproteobacteria	213481|Bdellovibrionales	S	Belongs to the SfsA family	sfsA	-	-	ko:K06206	-	-	-	-	ko00000	-	-	-	SfsA
DYD3_k127_3667750_0	862908.BMS_1018	5.79e-185	587.0	COG0372@1|root,COG0372@2|Bacteria,1MUKX@1224|Proteobacteria,42N8U@68525|delta/epsilon subdivisions,2MSZ2@213481|Bdellovibrionales,2WJAN@28221|Deltaproteobacteria	213481|Bdellovibrionales	C	Belongs to the citrate synthase family	gltA	-	2.3.3.1	ko:K01647	ko00020,ko00630,ko01100,ko01110,ko01120,ko01130,ko01200,ko01210,ko01230,map00020,map00630,map01100,map01110,map01120,map01130,map01200,map01210,map01230	M00009,M00010,M00012,M00740	R00351	RC00004,RC00067	br01601,ko00000,ko00001,ko00002,ko01000	-	-	-	Citrate_synt
DYD3_k127_3667750_1	1353529.M899_2723	4.578e-119	391.0	COG1840@1|root,COG1840@2|Bacteria,1MUEG@1224|Proteobacteria,42NKM@68525|delta/epsilon subdivisions,2MTI1@213481|Bdellovibrionales,2WM4Z@28221|Deltaproteobacteria	213481|Bdellovibrionales	P	extracellular solute-binding protein, family 1	-	-	-	ko:K02012	ko02010,map02010	M00190	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.10	-	-	SBP_bac_6,SBP_bac_8
DYD3_k127_3667750_4	525904.Tter_1772	8.172e-30	124.0	COG3153@1|root,COG3153@2|Bacteria	2|Bacteria	S	transferase activity, transferring acyl groups	-	-	2.3.1.189	ko:K15520	-	-	-	-	ko00000,ko01000	-	-	-	Acetyltransf_1,Acetyltransf_10
DYD3_k127_3686113_3	635013.TherJR_0733	5.757e-27	119.0	COG0682@1|root,COG0682@2|Bacteria,1TPAK@1239|Firmicutes,24APG@186801|Clostridia,261Q5@186807|Peptococcaceae	186801|Clostridia	M	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins	lgt	-	-	ko:K13292	-	-	-	-	ko00000,ko01000	-	-	-	LGT
DYD3_k127_3686113_2	1353529.M899_3451	2.078e-43	164.0	COG0597@1|root,COG0597@2|Bacteria,1RGV9@1224|Proteobacteria,42UAT@68525|delta/epsilon subdivisions,2MTBU@213481|Bdellovibrionales,2WQ31@28221|Deltaproteobacteria	213481|Bdellovibrionales	M	This protein specifically catalyzes the removal of signal peptides from prolipoproteins	lspA	-	3.4.23.36	ko:K03101	ko03060,map03060	-	-	-	ko00000,ko00001,ko01000,ko01002	-	-	-	Peptidase_A8
DYD3_k127_3686113_0	765869.BDW_12415	4.465e-168	541.0	COG2204@1|root,COG2204@2|Bacteria,1MU0N@1224|Proteobacteria,42M03@68525|delta/epsilon subdivisions,2MSN1@213481|Bdellovibrionales,2WIT0@28221|Deltaproteobacteria	213481|Bdellovibrionales	T	two component, sigma54 specific, transcriptional regulator, Fis family	-	-	-	-	-	-	-	-	-	-	-	-	HTH_8,Response_reg,Sigma54_activat
DYD3_k127_3686113_1	1201290.M902_1579	3.858e-56	198.0	COG0642@1|root,COG4252@1|root,COG2205@2|Bacteria,COG4252@2|Bacteria,1MXH7@1224|Proteobacteria,43CDG@68525|delta/epsilon subdivisions,2MSUH@213481|Bdellovibrionales,2X602@28221|Deltaproteobacteria	213481|Bdellovibrionales	T	CHASE2 domain	-	-	2.7.13.3	ko:K07636	ko02020,map02020	M00434	-	-	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	-	-	-	CHASE2,HATPase_c,HisKA
DYD3_k127_3733720_14	1408433.JHXV01000009_gene1341	1.519e-13	77.0	COG2849@1|root,COG2849@2|Bacteria,4NMDX@976|Bacteroidetes,1I51X@117743|Flavobacteriia	976|Bacteroidetes	M	PFAM MORN repeat variant	-	-	-	-	-	-	-	-	-	-	-	-	MORN_2,TPR_1,TPR_16,TPR_8
DYD3_k127_3733720_0	1353529.M899_2030	0.0	1071.0	COG0480@1|root,COG0480@2|Bacteria,1MUCV@1224|Proteobacteria,42NDG@68525|delta/epsilon subdivisions,2MSS8@213481|Bdellovibrionales,2WKYU@28221|Deltaproteobacteria	213481|Bdellovibrionales	J	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome	fusA1	-	-	ko:K02355	-	-	-	-	ko00000,ko03012,ko03029	-	-	-	EFG_C,EFG_II,EFG_IV,GTP_EFTU,GTP_EFTU_D2
DYD3_k127_3733720_5	1353529.M899_2022	2.193e-65	233.0	COG0583@1|root,COG0583@2|Bacteria,1MWVU@1224|Proteobacteria,42PMQ@68525|delta/epsilon subdivisions,2MTAN@213481|Bdellovibrionales,2WKB8@28221|Deltaproteobacteria	213481|Bdellovibrionales	K	Transcriptional regulator, LysR family	-	-	-	-	-	-	-	-	-	-	-	-	HTH_1,LysR_substrate
DYD3_k127_3733720_7	1353529.M899_2021	1.175e-37	156.0	COG0617@1|root,COG0617@2|Bacteria,1MVCS@1224|Proteobacteria,42QKZ@68525|delta/epsilon subdivisions,2MTPD@213481|Bdellovibrionales,2WJ74@28221|Deltaproteobacteria	213481|Bdellovibrionales	H	Adds poly(A) tail to the 3' end of many RNAs, which usually targets these RNAs for decay. Plays a significant role in the global control of gene expression, through influencing the rate of transcript degradation, and in the general RNA quality control	pcnB	-	2.7.7.19,2.7.7.72	ko:K00970,ko:K00974	ko03013,ko03018,map03013,map03018	-	R09382,R09383,R09384,R09386	RC00078	ko00000,ko00001,ko01000,ko03016,ko03019	-	-	-	PolyA_pol,PolyA_pol_RNAbd,PolyA_pol_arg_C
DYD3_k127_3733720_10	1121033.AUCF01000001_gene2069	1.349e-25	113.0	COG0454@1|root,COG0456@2|Bacteria,1NARR@1224|Proteobacteria,2UJ98@28211|Alphaproteobacteria	28211|Alphaproteobacteria	K	Acetyltransferase (GNAT) family	-	-	-	-	-	-	-	-	-	-	-	-	Acetyltransf_1,Acetyltransf_7
DYD3_k127_3733720_8	404589.Anae109_0055	3.044e-36	151.0	COG2821@1|root,COG2821@2|Bacteria,1MXD4@1224|Proteobacteria,42P7C@68525|delta/epsilon subdivisions,2WKKF@28221|Deltaproteobacteria,2Z08W@29|Myxococcales	28221|Deltaproteobacteria	M	MltA specific insert domain	-	-	-	ko:K08304	-	-	-	-	ko00000,ko01000,ko01011	-	GH102	-	3D,MltA
DYD3_k127_3733720_3	1353529.M899_0252	7.369e-89	299.0	COG0327@1|root,COG0327@2|Bacteria,1MVUN@1224|Proteobacteria	1224|Proteobacteria	S	dinuclear metal center protein, YbgI	ybgI	GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0009314,GO:0009628,GO:0010212,GO:0042802,GO:0043167,GO:0043169,GO:0044424,GO:0044444,GO:0044464,GO:0046872,GO:0050896	3.5.4.16	ko:K22391	ko00790,ko01100,map00790,map01100	M00126	R00428,R04639,R05046,R05048	RC00263,RC00294,RC00323,RC00945,RC01188	ko00000,ko00001,ko00002,ko01000	-	-	-	NIF3
DYD3_k127_3733720_2	1120965.AUBV01000001_gene3209	5.776e-179	565.0	COG0191@1|root,COG0191@2|Bacteria,4NF5C@976|Bacteroidetes,47MC3@768503|Cytophagia	976|Bacteroidetes	G	fructose-bisphosphate aldolase, class II, yeast E. coli subtype	fbaA	-	4.1.2.13	ko:K01624	ko00010,ko00030,ko00051,ko00680,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00030,map00051,map00680,map00710,map01100,map01110,map01120,map01130,map01200,map01230	M00001,M00003,M00165,M00167,M00344,M00345	R01068,R01070,R01829,R02568	RC00438,RC00439,RC00603,RC00604	ko00000,ko00001,ko00002,ko01000	-	-	-	F_bP_aldolase
DYD3_k127_3733720_4	566466.NOR53_1758	6.625e-76	276.0	COG3748@1|root,COG3748@2|Bacteria,1MWHB@1224|Proteobacteria,1RRV4@1236|Gammaproteobacteria,1J8QE@118884|unclassified Gammaproteobacteria	1236|Gammaproteobacteria	S	Pfam:DUF989	-	-	-	-	-	-	-	-	-	-	-	-	Urate_ox_N
DYD3_k127_3733720_9	215803.DB30_4287	5.304e-36	156.0	COG3794@1|root,COG3794@2|Bacteria,1Q2EH@1224|Proteobacteria,43807@68525|delta/epsilon subdivisions,2X3A8@28221|Deltaproteobacteria,2YV38@29|Myxococcales	28221|Deltaproteobacteria	C	Carboxypeptidase regulatory-like domain	-	-	-	-	-	-	-	-	-	-	-	-	CarboxypepD_reg
DYD3_k127_3733720_12	65071.PYU1_T002569	5.162e-23	101.0	COG2351@1|root,KOG3006@2759|Eukaryota,1MH3B@121069|Pythiales	121069|Pythiales	I	hydrolase. Source PGD	-	-	-	-	-	-	-	-	-	-	-	-	Transthyretin
DYD3_k127_3733720_1	529818.AMSG_12430T0	1.039e-315	1020.0	COG2225@1|root,COG4266@1|root,KOG0769@2759|Eukaryota,KOG1261@2759|Eukaryota,KOG4145@2759|Eukaryota	2759|Eukaryota	F	allantoicase activity	ALLC	GO:0000003,GO:0000255,GO:0000295,GO:0003674,GO:0003824,GO:0004037,GO:0005215,GO:0005346,GO:0005347,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005740,GO:0005743,GO:0005773,GO:0005774,GO:0005777,GO:0005778,GO:0005779,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0006820,GO:0006839,GO:0006855,GO:0006862,GO:0006950,GO:0007154,GO:0008150,GO:0008152,GO:0008324,GO:0008509,GO:0008514,GO:0009267,GO:0009605,GO:0009987,GO:0009991,GO:0010467,GO:0015075,GO:0015101,GO:0015215,GO:0015216,GO:0015217,GO:0015228,GO:0015230,GO:0015238,GO:0015605,GO:0015695,GO:0015711,GO:0015748,GO:0015858,GO:0015865,GO:0015866,GO:0015867,GO:0015868,GO:0015880,GO:0015893,GO:0015931,GO:0015932,GO:0016020,GO:0016021,GO:0016043,GO:0016787,GO:0016810,GO:0016813,GO:0017144,GO:0019866,GO:0019954,GO:0022857,GO:0030587,GO:0031090,GO:0031152,GO:0031224,GO:0031231,GO:0031300,GO:0031301,GO:0031667,GO:0031668,GO:0031669,GO:0031903,GO:0031966,GO:0031967,GO:0031975,GO:0032502,GO:0032535,GO:0033554,GO:0034220,GO:0034641,GO:0035349,GO:0035350,GO:0035352,GO:0042221,GO:0042493,GO:0042579,GO:0042594,GO:0043132,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043603,GO:0044237,GO:0044375,GO:0044422,GO:0044424,GO:0044425,GO:0044429,GO:0044437,GO:0044438,GO:0044439,GO:0044444,GO:0044446,GO:0044464,GO:0044610,GO:0044764,GO:0046483,GO:0048856,GO:0050896,GO:0051179,GO:0051181,GO:0051182,GO:0051184,GO:0051185,GO:0051234,GO:0051503,GO:0051703,GO:0051704,GO:0051716,GO:0051724,GO:0055085,GO:0065007,GO:0065008,GO:0071077,GO:0071106,GO:0071496,GO:0071702,GO:0071704,GO:0071705,GO:0071840,GO:0072530,GO:0080121,GO:0080122,GO:0090066,GO:0090702,GO:0098588,GO:0098630,GO:0098655,GO:0098656,GO:0098743,GO:0098805,GO:0099120,GO:1901264,GO:1901360,GO:1901505,GO:1901564,GO:1901679	1.3.2.3,3.5.3.4	ko:K00225,ko:K01477,ko:K13354,ko:K15168	ko00053,ko00230,ko01100,ko01110,ko01120,ko04146,map00053,map00230,map01100,map01110,map01120,map04146	M00114,M00546	R00640,R02422,R07679	RC00092,RC00195,RC00379,RC00712	ko00000,ko00001,ko00002,ko01000,ko02000,ko03021	2.A.29.20.1	-	-	Allantoicase,Mito_carr
DYD3_k127_3733720_11	1121438.JNJA01000001_gene2608	1.29e-23	108.0	COG0671@1|root,COG0671@2|Bacteria,1R91F@1224|Proteobacteria,435NU@68525|delta/epsilon subdivisions,2X025@28221|Deltaproteobacteria,2M9WZ@213115|Desulfovibrionales	28221|Deltaproteobacteria	I	Acid phosphatase homologues	-	-	3.1.3.2	ko:K09474	ko00740,ko01100,ko02020,map00740,map01100,map02020	-	R00548	RC00017	ko00000,ko00001,ko01000	-	-	-	PAP2
DYD3_k127_3733720_16	1144343.PMI41_04965	1.525e-05	53.0	COG0563@1|root,COG0563@2|Bacteria	2|Bacteria	F	adenylate kinase activity	adk	-	2.7.4.3	ko:K00939	ko00230,ko00730,ko01100,ko01110,ko01130,map00230,map00730,map01100,map01110,map01130	M00049	R00127,R01547,R11319	RC00002	ko00000,ko00001,ko00002,ko01000,ko04147	-	-	-	ADK,ADK_lid
DYD3_k127_3733720_17	522772.Dacet_1597	0.0004205	51.0	COG1618@1|root,COG1618@2|Bacteria	2|Bacteria	F	nucleotide phosphatase activity, acting on free nucleotides	mobA	-	2.7.4.9,2.7.7.77,3.6.1.15,3.6.1.55,3.6.3.29,3.6.3.34	ko:K00943,ko:K02013,ko:K02017,ko:K03574,ko:K03752,ko:K06928	ko00230,ko00240,ko00730,ko00790,ko01100,ko02010,map00230,map00240,map00730,map00790,map01100,map02010	M00053,M00189,M00240	R00086,R00615,R02094,R02098,R11581	RC00002	ko00000,ko00001,ko00002,ko01000,ko02000,ko03400	3.A.1.14,3.A.1.8	-	-	DUF2478,NTPase_1
DYD3_k127_3733720_13	264462.Bd2635	4.727e-21	96.0	COG1975@1|root,COG1975@2|Bacteria,1R3RT@1224|Proteobacteria,43BHQ@68525|delta/epsilon subdivisions,2MTVP@213481|Bdellovibrionales,2X6W7@28221|Deltaproteobacteria	213481|Bdellovibrionales	O	XdhC Rossmann domain	pcmU	-	-	ko:K07402	-	-	-	-	ko00000	-	-	-	XdhC_C,XdhC_CoxI
DYD3_k127_3733936_6	862908.BMS_0401	2.468e-74	253.0	COG0553@1|root,COG0553@2|Bacteria,1MV6M@1224|Proteobacteria,42M5P@68525|delta/epsilon subdivisions,2MSMD@213481|Bdellovibrionales,2WIW8@28221|Deltaproteobacteria	213481|Bdellovibrionales	KL	helicase domain protein	-	-	-	-	-	-	-	-	-	-	-	-	Helicase_C,SNF2_N
DYD3_k127_3733936_7	290400.Jann_3572	6.988e-14	75.0	COG3237@1|root,COG3237@2|Bacteria,1N6X4@1224|Proteobacteria,2UF5Q@28211|Alphaproteobacteria	28211|Alphaproteobacteria	S	Belongs to the UPF0337 (CsbD) family	-	-	-	-	-	-	-	-	-	-	-	-	CsbD
DYD3_k127_3733936_4	862908.BMS_2367	4.145e-83	283.0	COG0778@1|root,COG0778@2|Bacteria,1RBXY@1224|Proteobacteria,43DUT@68525|delta/epsilon subdivisions,2MTSM@213481|Bdellovibrionales,2X2AV@28221|Deltaproteobacteria	213481|Bdellovibrionales	C	Nitroreductase family	-	-	-	-	-	-	-	-	-	-	-	-	Nitroreductase
DYD3_k127_3733936_0	264462.Bd3092	1.765e-182	582.0	COG0840@1|root,COG0840@2|Bacteria,1MU9B@1224|Proteobacteria,42KZR@68525|delta/epsilon subdivisions,2MTWB@213481|Bdellovibrionales,2WJ2T@28221|Deltaproteobacteria	213481|Bdellovibrionales	T	histidine kinase HAMP region domain protein	-	-	-	ko:K03406	ko02020,ko02030,map02020,map02030	-	-	-	ko00000,ko00001,ko02035	-	-	-	4HB_MCP_1,HAMP,MCPsignal,dCache_1,dCache_2,dCache_3,sCache_2
DYD3_k127_3733936_2	570967.JMLV01000008_gene1306	5.286e-90	307.0	COG2133@1|root,COG2133@2|Bacteria,1MV2E@1224|Proteobacteria,2TR47@28211|Alphaproteobacteria,2JPVS@204441|Rhodospirillales	204441|Rhodospirillales	G	Glucose / Sorbosone dehydrogenase	-	-	-	ko:K21430	-	-	-	-	ko00000,ko01000	-	-	-	GSDH
DYD3_k127_3733936_3	1184267.A11Q_1967	4.021e-85	294.0	COG2133@1|root,COG2133@2|Bacteria,1MV2E@1224|Proteobacteria,42QQG@68525|delta/epsilon subdivisions,2MTKR@213481|Bdellovibrionales,2WMXN@28221|Deltaproteobacteria	213481|Bdellovibrionales	G	Glucose / Sorbosone dehydrogenase	gdhB	-	-	ko:K21430	-	-	-	-	ko00000,ko01000	-	-	-	GSDH,Ricin_B_lectin
DYD3_k127_3733936_1	1121904.ARBP01000003_gene6488	3.423e-93	316.0	COG0859@1|root,COG0859@2|Bacteria,4PKBY@976|Bacteroidetes,47NHC@768503|Cytophagia	976|Bacteroidetes	M	Glycosyltransferase family 9 (heptosyltransferase)	-	-	-	ko:K02843	ko00540,ko01100,map00540,map01100	M00080	-	-	ko00000,ko00001,ko00002,ko01000,ko01003,ko01005	-	GT9	-	Glyco_transf_9
DYD3_k127_3733936_5	926562.Oweho_3520	8.278e-76	262.0	COG0463@1|root,COG0463@2|Bacteria,4NGYU@976|Bacteroidetes,1HXFJ@117743|Flavobacteriia,2PB57@246874|Cryomorphaceae	976|Bacteroidetes	M	Glycosyl transferase family 2	-	-	-	-	-	-	-	-	-	-	-	-	Glycos_transf_2
DYD3_k127_3743620_14	573.JG24_05680	9.018e-12	71.0	COG0782@1|root,COG0782@2|Bacteria,1MZNY@1224|Proteobacteria,1S8V4@1236|Gammaproteobacteria	1236|Gammaproteobacteria	K	regulator of nucleoside diphosphate kinase	rnk	-	-	ko:K06140	-	-	-	-	ko00000,ko03000	-	-	-	GreA_GreB,Rnk_N
DYD3_k127_3743620_8	1168067.JAGP01000001_gene1212	2.586e-57	202.0	COG3791@1|root,COG3791@2|Bacteria,1N031@1224|Proteobacteria,1S8W1@1236|Gammaproteobacteria,462KW@72273|Thiotrichales	72273|Thiotrichales	S	Glutathione-dependent formaldehyde-activating enzyme	-	-	-	-	-	-	-	-	-	-	-	-	GFA
DYD3_k127_3743620_4	204669.Acid345_0050	2.576e-89	303.0	COG0726@1|root,COG0726@2|Bacteria	2|Bacteria	G	polysaccharide deacetylase	-	-	3.5.1.104	ko:K22278	-	-	-	-	ko00000,ko01000	-	-	-	Polysacc_deac_1
DYD3_k127_3743620_3	1210884.HG799462_gene7988	1.78e-96	321.0	COG0500@1|root,COG0500@2|Bacteria,2IZ18@203682|Planctomycetes	203682|Planctomycetes	Q	Methyltransferase domain	-	-	-	-	-	-	-	-	-	-	-	-	Methyltransf_11
DYD3_k127_3743620_9	395493.BegalDRAFT_1169	2.841e-44	169.0	COG0500@1|root,COG0500@2|Bacteria,1RAE4@1224|Proteobacteria,1S0RC@1236|Gammaproteobacteria,460TU@72273|Thiotrichales	72273|Thiotrichales	Q	Belongs to the class I-like SAM-binding methyltransferase superfamily. TPMT family	tpm	-	2.1.1.67	ko:K00569	ko00983,map00983	-	R08236,R08239,R08246	RC00003,RC00980,RC02277	ko00000,ko00001,ko01000	-	-	-	TPMT
DYD3_k127_3743620_10	435908.IDSA_10145	3.503e-31	123.0	COG1942@1|root,COG1942@2|Bacteria,1N6WW@1224|Proteobacteria,1SC97@1236|Gammaproteobacteria	1236|Gammaproteobacteria	G	4-oxalocrotonate tautomerase	-	-	5.3.2.6	ko:K01821	ko00362,ko00621,ko00622,ko01100,ko01120,ko01220,map00362,map00621,map00622,map01100,map01120,map01220	M00569	R03966,R05389	RC01040,RC01355	ko00000,ko00001,ko00002,ko01000	-	-	-	Tautomerase
DYD3_k127_3743620_13	1353529.M899_0677	2.37e-24	108.0	COG0454@1|root,COG0454@2|Bacteria	2|Bacteria	K	-acetyltransferase	yrkN	-	2.3.1.82	ko:K03826,ko:K03827,ko:K18816	-	-	-	-	br01600,ko00000,ko01000,ko01504	-	-	-	Acetyltransf_1,Acetyltransf_10,Acetyltransf_7
DYD3_k127_3743620_16	871585.BDGL_002910	1.51e-07	62.0	COG0583@1|root,COG0583@2|Bacteria,1MU7H@1224|Proteobacteria,1RPF8@1236|Gammaproteobacteria,3NKDK@468|Moraxellaceae	1236|Gammaproteobacteria	K	LysR substrate binding domain	yafC	GO:0006139,GO:0006351,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009314,GO:0009628,GO:0009987,GO:0010212,GO:0010467,GO:0016070,GO:0018130,GO:0019438,GO:0032774,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0046483,GO:0050896,GO:0071704,GO:0090304,GO:0097659,GO:1901360,GO:1901362,GO:1901576	-	-	-	-	-	-	-	-	-	-	HTH_1,LysR_substrate
DYD3_k127_3743620_15	411901.BACCAC_03705	8.707e-08	60.0	COG2207@1|root,COG3449@1|root,COG2207@2|Bacteria,COG3449@2|Bacteria,4NHWS@976|Bacteroidetes,2FPZ5@200643|Bacteroidia,4APAA@815|Bacteroidaceae	976|Bacteroidetes	K	methylphosphotriester-DNA alkyltransferase (AraC XylS family)	-	-	-	ko:K13652	-	-	-	-	ko00000,ko03000	-	-	-	GyrI-like,HTH_18
DYD3_k127_3743620_0	1353529.M899_2779	1.314e-115	394.0	COG3011@1|root,COG3011@2|Bacteria,1Q0EU@1224|Proteobacteria,437QY@68525|delta/epsilon subdivisions,2MUEV@213481|Bdellovibrionales,2X2ZJ@28221|Deltaproteobacteria	213481|Bdellovibrionales	S	Protein conserved in bacteria	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_3743620_12	1297742.A176_06421	1.957e-26	116.0	COG5002@1|root,COG5002@2|Bacteria,1QUJ9@1224|Proteobacteria,42MEB@68525|delta/epsilon subdivisions,2X85R@28221|Deltaproteobacteria	28221|Deltaproteobacteria	T	His Kinase A (phosphoacceptor) domain	-	-	-	-	-	-	-	-	-	-	-	-	HATPase_c,HisKA,MEDS
DYD3_k127_3743620_11	379066.GAU_3151	3.268e-28	121.0	2E0TE@1|root,32WB2@2|Bacteria	2|Bacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_3743620_7	862908.BMS_1353	5.182e-69	243.0	COG2304@1|root,COG2304@2|Bacteria	2|Bacteria	IU	oxidoreductase activity	tadG	-	-	ko:K12515	-	-	-	-	ko00000,ko02044	-	-	-	Tad,VWA,VWA_2
DYD3_k127_3743620_6	862908.BMS_1354	2.539e-72	251.0	COG0811@1|root,COG0811@2|Bacteria,1NXZ9@1224|Proteobacteria	1224|Proteobacteria	U	PFAM MotA TolQ ExbB proton channel family	-	-	-	-	-	-	-	-	-	-	-	-	MotA_ExbB
DYD3_k127_3743620_1	1201290.M902_1061	5.707e-112	372.0	COG0115@1|root,COG0115@2|Bacteria,1MVB0@1224|Proteobacteria,42MKX@68525|delta/epsilon subdivisions,2MSWV@213481|Bdellovibrionales,2WJ7X@28221|Deltaproteobacteria	213481|Bdellovibrionales	E	Branched-chain amino acid aminotransferase	ilvE	-	2.6.1.42	ko:K00826	ko00270,ko00280,ko00290,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00270,map00280,map00290,map00770,map01100,map01110,map01130,map01210,map01230	M00019,M00036,M00119,M00570	R01090,R01214,R02199,R10991	RC00006,RC00036	ko00000,ko00001,ko00002,ko01000,ko01007	-	-	iAF987.Gmet_2853	Aminotran_4
DYD3_k127_3743620_2	264462.Bd1342	2.665e-111	371.0	COG4335@1|root,COG4335@2|Bacteria,1P0C1@1224|Proteobacteria,42UBS@68525|delta/epsilon subdivisions,2MSYX@213481|Bdellovibrionales,2WTKZ@28221|Deltaproteobacteria	213481|Bdellovibrionales	L	DNA alkylation repair enzyme	-	-	-	-	-	-	-	-	-	-	-	-	DNA_alkylation
DYD3_k127_3743620_5	862908.BMS_2510	9.63e-83	278.0	COG1055@1|root,COG1055@2|Bacteria,1N68M@1224|Proteobacteria,42PD9@68525|delta/epsilon subdivisions,2MTG9@213481|Bdellovibrionales,2WKRV@28221|Deltaproteobacteria	213481|Bdellovibrionales	P	Putative Na+/H+ antiporter	-	-	-	-	-	-	-	-	-	-	-	-	Na_H_antiport_3
DYD3_k127_3757449_3	63737.Npun_R4697	2.743e-12	72.0	COG4638@1|root,COG4638@2|Bacteria,1G2UQ@1117|Cyanobacteria,1HM5N@1161|Nostocales	1117|Cyanobacteria	P	PFAM Rieske 2Fe-2S domain	hcaE	-	-	ko:K19982	ko00404,ko01130,map00404,map01130	M00790	R11107	RC01333	ko00000,ko00001,ko00002,ko01000	-	-	-	PaO,Rieske
DYD3_k127_3757449_4	443254.Marpi_0433	0.0005965	51.0	COG0392@1|root,COG0392@2|Bacteria,2GD8B@200918|Thermotogae	200918|Thermotogae	S	PFAM conserved	-	-	-	ko:K07027	-	-	-	-	ko00000,ko02000	4.D.2	-	-	LPG_synthase_TM
DYD3_k127_3757449_0	1005048.CFU_2181	4.004e-55	205.0	COG2175@1|root,COG2175@2|Bacteria,1MWQ6@1224|Proteobacteria,2VKNN@28216|Betaproteobacteria,4736V@75682|Oxalobacteraceae	1224|Proteobacteria	Q	Taurine catabolism dioxygenase TauD, TfdA family	-	-	-	-	-	-	-	-	-	-	-	-	TauD
DYD3_k127_3757449_1	1173022.Cri9333_2244	2.256e-16	81.0	COG4638@1|root,COG4638@2|Bacteria,1G2UQ@1117|Cyanobacteria,1H8G2@1150|Oscillatoriales	1117|Cyanobacteria	P	PFAM Rieske 2Fe-2S domain	hcaE	-	-	ko:K19982	ko00404,ko01130,map00404,map01130	M00790	R11107	RC01333	ko00000,ko00001,ko00002,ko01000	-	-	-	PaO,Rieske
DYD3_k127_3795182_3	1353529.M899_3496	1.783e-127	416.0	COG1228@1|root,COG1228@2|Bacteria,1MUYR@1224|Proteobacteria,42NVH@68525|delta/epsilon subdivisions,2MSY9@213481|Bdellovibrionales,2WJN9@28221|Deltaproteobacteria	213481|Bdellovibrionales	Q	Belongs to the metallo-dependent hydrolases superfamily. HutI family	hutI	-	3.5.2.7	ko:K01468	ko00340,ko01100,map00340,map01100	M00045	R02288	RC00683	ko00000,ko00001,ko00002,ko01000	-	-	-	Amidohydro_1,Amidohydro_3
DYD3_k127_3795182_0	643867.Ftrac_0095	2.079e-236	742.0	COG2987@1|root,COG2987@2|Bacteria,4NF2P@976|Bacteroidetes,47K5S@768503|Cytophagia	976|Bacteroidetes	E	Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate	hutU	-	4.2.1.49	ko:K01712	ko00340,ko01100,map00340,map01100	M00045	R02914	RC00804	ko00000,ko00001,ko00002,ko01000	-	-	-	Urocanase,Urocanase_C,Urocanase_N
DYD3_k127_3795182_1	1353529.M899_3494	4.385e-227	713.0	COG2986@1|root,COG2986@2|Bacteria,1MU6K@1224|Proteobacteria,42MST@68525|delta/epsilon subdivisions,2MSRA@213481|Bdellovibrionales,2WKAN@28221|Deltaproteobacteria	213481|Bdellovibrionales	E	Histidine ammonia-lyase	hutH	-	4.3.1.3	ko:K01745	ko00340,ko01100,map00340,map01100	M00045	R01168	RC00361	ko00000,ko00001,ko00002,ko01000	-	-	-	Lyase_aromatic
DYD3_k127_3795182_6	862908.BMS_3419	5.728e-67	235.0	COG0036@1|root,COG0036@2|Bacteria,1MUZM@1224|Proteobacteria,42NC0@68525|delta/epsilon subdivisions,2MT00@213481|Bdellovibrionales,2WJK9@28221|Deltaproteobacteria	213481|Bdellovibrionales	G	Belongs to the ribulose-phosphate 3-epimerase family	rpe	-	5.1.3.1	ko:K01783	ko00030,ko00040,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00040,map00710,map01100,map01110,map01120,map01130,map01200,map01230	M00004,M00007	R01529	RC00540	ko00000,ko00001,ko00002,ko01000	-	-	-	Ribul_P_3_epim
DYD3_k127_3795182_2	1353529.M899_3492	1.398e-134	434.0	COG0223@1|root,COG0223@2|Bacteria,1MU4Q@1224|Proteobacteria,42M3E@68525|delta/epsilon subdivisions,2MT0P@213481|Bdellovibrionales,2WKMK@28221|Deltaproteobacteria	213481|Bdellovibrionales	J	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus	fmt	-	1.1.1.305,2.1.2.13,2.1.2.9	ko:K00604,ko:K10011	ko00520,ko00670,ko00970,ko01503,map00520,map00670,map00970,map01503	M00721,M00761	R03940,R07658,R07660	RC00026,RC00165,RC01575,RC01812	ko00000,ko00001,ko00002,ko01000,ko01005	-	-	-	Formyl_trans_C,Formyl_trans_N
DYD3_k127_3795182_5	1201288.M900_2803	9.673e-70	241.0	COG0242@1|root,COG0242@2|Bacteria,1RA2P@1224|Proteobacteria,42RFN@68525|delta/epsilon subdivisions,2MTU6@213481|Bdellovibrionales,2WP25@28221|Deltaproteobacteria	213481|Bdellovibrionales	J	Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions	def	-	3.5.1.88	ko:K01462	-	-	-	-	ko00000,ko01000	-	-	-	Pep_deformylase
DYD3_k127_3795182_4	862908.BMS_3415	5.725e-74	261.0	COG0795@1|root,COG0795@2|Bacteria,1MVW3@1224|Proteobacteria,42N5X@68525|delta/epsilon subdivisions,2MTAZ@213481|Bdellovibrionales,2WJ3H@28221|Deltaproteobacteria	213481|Bdellovibrionales	S	PFAM permease YjgP YjgQ family protein	lptG	-	-	ko:K11720	ko02010,map02010	M00320	-	-	ko00000,ko00001,ko00002,ko02000	1.B.42.1	-	-	YjgP_YjgQ
DYD3_k127_3795182_7	1353529.M899_3486	1.025e-60	213.0	COG1210@1|root,COG1210@2|Bacteria,1MV5F@1224|Proteobacteria,42MJU@68525|delta/epsilon subdivisions,2MSX6@213481|Bdellovibrionales,2WJS4@28221|Deltaproteobacteria	213481|Bdellovibrionales	M	UTP-glucose-1-phosphate uridylyltransferase	galU	-	2.7.7.9	ko:K00963	ko00040,ko00052,ko00500,ko00520,ko01100,ko01130,map00040,map00052,map00500,map00520,map01100,map01130	M00129,M00361,M00362,M00549	R00289	RC00002	ko00000,ko00001,ko00002,ko01000	-	-	-	NTP_transferase
DYD3_k127_3802351_0	862908.BMS_2203	9.401e-86	290.0	COG0602@1|root,COG0602@2|Bacteria,1MUJ2@1224|Proteobacteria,42RT9@68525|delta/epsilon subdivisions,2MTFT@213481|Bdellovibrionales,2WNJ0@28221|Deltaproteobacteria	213481|Bdellovibrionales	H	Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7- carboxy-7-deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds	queE	-	4.3.99.3	ko:K10026	ko00790,ko01100,map00790,map01100	-	R10002	RC02989	ko00000,ko00001,ko01000,ko03016	-	-	iAF987.Gmet_1658	Fer4_14,Radical_SAM
DYD3_k127_3802351_4	862908.BMS_2201	1.182e-25	110.0	COG2363@1|root,COG2363@2|Bacteria,1MZX3@1224|Proteobacteria,42UHB@68525|delta/epsilon subdivisions,2WQHM@28221|Deltaproteobacteria	28221|Deltaproteobacteria	S	Protein of unknown function (DUF423)	-	-	-	-	-	-	-	-	-	-	-	-	DUF423
DYD3_k127_3802351_2	1356852.N008_10665	1.687e-36	142.0	COG2050@1|root,COG2050@2|Bacteria,4NUYW@976|Bacteroidetes,47VEA@768503|Cytophagia	976|Bacteroidetes	Q	Thioesterase superfamily	-	-	-	-	-	-	-	-	-	-	-	-	4HBT
DYD3_k127_3802351_1	331113.SNE_A10430	1.312e-45	175.0	COG3091@1|root,COG3091@2|Bacteria	2|Bacteria	K	SprT-like family	sprT	-	-	-	-	-	-	-	-	-	-	-	SprT-like
DYD3_k127_3821389_0	273068.TTE2145	5.141e-66	235.0	COG1131@1|root,COG1131@2|Bacteria,1TQUS@1239|Firmicutes,25AZ1@186801|Clostridia,42EK9@68295|Thermoanaerobacterales	186801|Clostridia	V	PFAM ABC transporter related	-	-	-	ko:K01990	-	M00254	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	ABC_tran
DYD3_k127_3821389_2	335543.Sfum_1754	6.268e-37	149.0	COG1277@1|root,COG1277@2|Bacteria,1NZZ9@1224|Proteobacteria,42SH9@68525|delta/epsilon subdivisions,2WPWW@28221|Deltaproteobacteria,2MRMI@213462|Syntrophobacterales	28221|Deltaproteobacteria	S	ABC-2 family transporter protein	-	-	-	ko:K01992	-	M00254	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	ABC2_membrane_2,ABC2_membrane_3,ABC_transp_aux
DYD3_k127_3821389_1	1499967.BAYZ01000095_gene4168	1.504e-63	238.0	COG3225@1|root,COG3225@2|Bacteria,2NNVN@2323|unclassified Bacteria	2|Bacteria	N	ABC-type uncharacterized transport system	gldG	-	-	ko:K01992	-	M00254	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	ABC2_membrane_2,ABC_transp_aux
DYD3_k127_3827945_0	1353529.M899_0234	3.593e-266	841.0	COG0072@1|root,COG0073@1|root,COG0072@2|Bacteria,COG0073@2|Bacteria,1MWKS@1224|Proteobacteria,42M1G@68525|delta/epsilon subdivisions,2MSSX@213481|Bdellovibrionales,2WJ7V@28221|Deltaproteobacteria	213481|Bdellovibrionales	J	Phenylalanyl-tRNA synthetase, beta subunit	pheT	GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006432,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009328,GO:0009987,GO:0010467,GO:0016070,GO:0019538,GO:0019752,GO:0032991,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:1901360,GO:1901564,GO:1901566,GO:1901576,GO:1902494	6.1.1.20	ko:K01890	ko00970,map00970	M00359,M00360	R03660	RC00055,RC00523	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	-	-	-	B3_4,B5,FDX-ACB,tRNA_bind
DYD3_k127_3827945_2	862908.BMS_1903	5.491e-168	533.0	COG0016@1|root,COG0016@2|Bacteria,1MVD7@1224|Proteobacteria,42MB0@68525|delta/epsilon subdivisions,2MSP2@213481|Bdellovibrionales,2WJ42@28221|Deltaproteobacteria	213481|Bdellovibrionales	J	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily	pheS	GO:0003674,GO:0003824,GO:0004812,GO:0004826,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006432,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576	6.1.1.20	ko:K01889	ko00970,map00970	M00359,M00360	R03660	RC00055,RC00523	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	-	-	iAF987.Gmet_1415	Phe_tRNA-synt_N,tRNA-synt_2d
DYD3_k127_3827945_12	862908.BMS_1904	3.519e-36	143.0	2CA4A@1|root,32RQK@2|Bacteria,1RE4A@1224|Proteobacteria,42RRI@68525|delta/epsilon subdivisions,2WND4@28221|Deltaproteobacteria	28221|Deltaproteobacteria	S	Domain of unknown function (DUF4416)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4416
DYD3_k127_3827945_3	1353529.M899_0237	2.553e-130	424.0	COG2870@1|root,COG2870@2|Bacteria,1MV3Z@1224|Proteobacteria,42MBC@68525|delta/epsilon subdivisions,2MSXC@213481|Bdellovibrionales,2WIKU@28221|Deltaproteobacteria	213481|Bdellovibrionales	H	Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose	hldE	GO:0000271,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005976,GO:0006629,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008653,GO:0008713,GO:0008920,GO:0009058,GO:0009059,GO:0009103,GO:0009244,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0016301,GO:0016310,GO:0016740,GO:0016757,GO:0016772,GO:0019200,GO:0033692,GO:0034637,GO:0034645,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044262,GO:0044264,GO:0044424,GO:0044444,GO:0044464,GO:0046401,GO:0046835,GO:0071704,GO:1901135,GO:1901137,GO:1901576,GO:1903509	2.7.1.167,2.7.7.70	ko:K03272	ko00540,ko01100,map00540,map01100	M00064	R05644,R05646	RC00002,RC00078	ko00000,ko00001,ko00002,ko01000,ko01005	-	-	iAF987.Gmet_0922	CTP_transf_like,PfkB
DYD3_k127_3827945_10	1201288.M900_1091	6.239e-55	201.0	COG0283@1|root,COG0283@2|Bacteria,1MUUD@1224|Proteobacteria,42STI@68525|delta/epsilon subdivisions,2MT5T@213481|Bdellovibrionales,2WP1K@28221|Deltaproteobacteria	213481|Bdellovibrionales	F	Belongs to the cytidylate kinase family. Type 1 subfamily	cmk	-	2.7.4.25	ko:K00945	ko00240,ko01100,map00240,map01100	M00052	R00158,R00512,R01665	RC00002	ko00000,ko00001,ko00002,ko01000	-	-	-	Cytidylate_kin
DYD3_k127_3827945_13	862908.BMS_1908	1.757e-28	125.0	COG0741@1|root,COG0741@2|Bacteria,1N1GB@1224|Proteobacteria,42X1K@68525|delta/epsilon subdivisions,2MTCK@213481|Bdellovibrionales,2WTCI@28221|Deltaproteobacteria	213481|Bdellovibrionales	M	COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM invasin domains)	-	-	-	ko:K08309	-	-	-	-	ko00000,ko01000,ko01011	-	GH23	-	SLT
DYD3_k127_3827945_1	862908.BMS_1909	5.393e-223	712.0	COG1331@1|root,COG1331@2|Bacteria,1MUUT@1224|Proteobacteria,42MP3@68525|delta/epsilon subdivisions,2WJ7Y@28221|Deltaproteobacteria	28221|Deltaproteobacteria	O	Protein of unknown function, DUF255	yyaL	-	-	ko:K06888	-	-	-	-	ko00000	-	-	-	GlcNAc_2-epim,Thioredox_DsbH
DYD3_k127_3827945_4	862908.BMS_1910	2.516e-86	295.0	COG1804@1|root,COG1804@2|Bacteria,1MW1H@1224|Proteobacteria	1224|Proteobacteria	C	carnitine dehydratase	-	-	2.8.3.16	ko:K07749	-	-	-	-	ko00000,ko01000	-	-	-	CoA_transf_3
DYD3_k127_3827945_9	1201288.M900_2029	8.427e-57	202.0	COG1047@1|root,COG1047@2|Bacteria,1RD35@1224|Proteobacteria,42MCS@68525|delta/epsilon subdivisions,2MUR5@213481|Bdellovibrionales,2WQGI@28221|Deltaproteobacteria	213481|Bdellovibrionales	O	Peptidyl-prolyl cis-trans isomerase	-	-	5.2.1.8	ko:K01802	-	-	-	-	ko00000,ko01000	-	-	-	FKBP_C
DYD3_k127_3827945_7	153721.MYP_2622	2.645e-73	258.0	COG4948@1|root,COG4948@2|Bacteria,4NG8N@976|Bacteroidetes,47K7T@768503|Cytophagia	976|Bacteroidetes	M	mandelate racemase muconate lactonizing	ykfB	GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016853,GO:0016854,GO:0034641,GO:0043167,GO:0043169,GO:0043603,GO:0044237,GO:0046872,GO:0071704,GO:1901564	5.1.1.20,5.1.1.3	ko:K01776,ko:K19802	ko00471,ko01100,map00471,map01100	-	R00260,R10938	RC00302,RC03309	ko00000,ko00001,ko01000,ko01011	-	-	-	MR_MLE_C,MR_MLE_N
DYD3_k127_3827945_14	1353529.M899_0245	1.256e-24	111.0	COG3863@1|root,COG3863@2|Bacteria,1NNIK@1224|Proteobacteria,43BEG@68525|delta/epsilon subdivisions,2X6T1@28221|Deltaproteobacteria	28221|Deltaproteobacteria	S	Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family	-	-	-	-	-	-	-	-	-	-	-	-	Peptidase_C92
DYD3_k127_3827945_8	1123279.ATUS01000006_gene3508	1.885e-61	219.0	COG1876@1|root,COG1876@2|Bacteria,1N2IC@1224|Proteobacteria,1S0DU@1236|Gammaproteobacteria,1J68J@118884|unclassified Gammaproteobacteria	1236|Gammaproteobacteria	M	COG1876 D-alanyl-D-alanine carboxypeptidase	vanY	-	-	-	-	-	-	-	-	-	-	-	VanY
DYD3_k127_3827945_11	862908.BMS_1422	1.206e-40	154.0	COG0824@1|root,COG0824@2|Bacteria,1REIH@1224|Proteobacteria,42UZ3@68525|delta/epsilon subdivisions,2MT36@213481|Bdellovibrionales,2WSFV@28221|Deltaproteobacteria	213481|Bdellovibrionales	S	Thioesterase-like superfamily	-	-	-	ko:K07107	-	-	-	-	ko00000,ko01000	-	-	-	4HBT_2
DYD3_k127_3827945_5	862908.BMS_1647	4.595e-76	262.0	2E9HT@1|root,333QW@2|Bacteria,1ND9N@1224|Proteobacteria,430F5@68525|delta/epsilon subdivisions,2MT4K@213481|Bdellovibrionales,2WVRV@28221|Deltaproteobacteria	213481|Bdellovibrionales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_3832060_0	862908.BMS_0629	2.377e-66	229.0	COG0766@1|root,COG0766@2|Bacteria,1MUH7@1224|Proteobacteria,42MJT@68525|delta/epsilon subdivisions,2MSU6@213481|Bdellovibrionales,2WJ7W@28221|Deltaproteobacteria	213481|Bdellovibrionales	M	Belongs to the EPSP synthase family. MurA subfamily	murA	-	2.5.1.7	ko:K00790	ko00520,ko00550,ko01100,map00520,map00550,map01100	-	R00660	RC00350	ko00000,ko00001,ko01000,ko01011	-	-	-	EPSP_synthase
DYD3_k127_3832060_2	862908.BMS_0630	2.689e-43	160.0	COG0537@1|root,COG0537@2|Bacteria,1RDCJ@1224|Proteobacteria,42SEH@68525|delta/epsilon subdivisions,2WRC9@28221|Deltaproteobacteria	28221|Deltaproteobacteria	FG	Scavenger mRNA decapping enzyme C-term binding	-	-	-	ko:K02503	-	-	-	-	ko00000,ko04147	-	-	-	HIT
DYD3_k127_3832060_1	1353529.M899_2506	3.749e-55	201.0	COG1729@1|root,COG1729@2|Bacteria	2|Bacteria	S	protein trimerization	-	-	-	-	-	-	-	-	-	-	-	-	TPR_16,TPR_6,TPR_8,YfiO
DYD3_k127_3832060_6	1201288.M900_0591	3.22e-12	69.0	COG0745@1|root,COG0745@2|Bacteria,1MVCB@1224|Proteobacteria,4314Y@68525|delta/epsilon subdivisions,2MUDX@213481|Bdellovibrionales,2WWYE@28221|Deltaproteobacteria	213481|Bdellovibrionales	K	Transcriptional regulatory protein, C terminal	-	-	-	-	-	-	-	-	-	-	-	-	Response_reg,Trans_reg_C
DYD3_k127_3907325_2	1232410.KI421421_gene3840	1.203e-124	412.0	COG0541@1|root,COG0541@2|Bacteria,1MVIA@1224|Proteobacteria,42M94@68525|delta/epsilon subdivisions,2WINB@28221|Deltaproteobacteria,43SA8@69541|Desulfuromonadales	28221|Deltaproteobacteria	U	Signal peptide binding domain	ffh	-	3.6.5.4	ko:K03106	ko02024,ko03060,ko03070,map02024,map03060,map03070	M00335	-	-	ko00000,ko00001,ko00002,ko01000,ko02044	3.A.5.1,3.A.5.2,3.A.5.7,3.A.5.8,3.A.5.9	-	-	SRP54,SRP54_N,SRP_SPB
DYD3_k127_3907325_6	1201290.M902_2751	1.978e-28	120.0	COG0546@1|root,COG0546@2|Bacteria	2|Bacteria	S	glycolate biosynthetic process	-	-	3.1.3.18	ko:K01091	ko00630,ko01100,ko01110,ko01130,map00630,map01100,map01110,map01130	-	R01334	RC00017	ko00000,ko00001,ko01000	-	-	-	HAD_2,NUDIX,Nudix_N
DYD3_k127_3907325_1	862908.BMS_2157	2.154e-130	429.0	COG0042@1|root,COG0042@2|Bacteria,1MV5V@1224|Proteobacteria,42N3M@68525|delta/epsilon subdivisions,2MSWR@213481|Bdellovibrionales,2WKM7@28221|Deltaproteobacteria	213481|Bdellovibrionales	H	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines	nifR3	-	-	ko:K05540	-	-	-	-	ko00000,ko01000,ko03016	-	-	-	Dus
DYD3_k127_3907325_5	264462.Bd1827	2.05e-41	158.0	COG1607@1|root,COG1607@2|Bacteria,1RAEQ@1224|Proteobacteria,42SPA@68525|delta/epsilon subdivisions,2MUST@213481|Bdellovibrionales,2WPPE@28221|Deltaproteobacteria	213481|Bdellovibrionales	I	PFAM thioesterase superfamily	-	-	-	-	-	-	-	-	-	-	-	-	4HBT
DYD3_k127_3907325_4	1487953.JMKF01000042_gene2628	8.246e-53	196.0	COG3239@1|root,COG3239@2|Bacteria	2|Bacteria	I	unsaturated fatty acid biosynthetic process	-	-	-	-	-	-	-	-	-	-	-	-	FA_desaturase
DYD3_k127_3907325_3	1353529.M899_2374	3.101e-67	256.0	COG2911@1|root,COG3210@1|root,COG2911@2|Bacteria,COG3210@2|Bacteria,1N928@1224|Proteobacteria	1224|Proteobacteria	M	Chaperone of endosialidase	-	-	-	-	-	-	-	-	-	-	-	-	Peptidase_S74
DYD3_k127_3907325_7	1144313.PMI10_01249	1.333e-18	101.0	COG5295@1|root,COG5295@2|Bacteria,4PHVQ@976|Bacteroidetes,1IDGQ@117743|Flavobacteriia,2NYDB@237|Flavobacterium	976|Bacteroidetes	UW	Hep Hag repeat protein	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_3907325_8	264462.Bd2548	2.901e-08	67.0	COG0729@1|root,COG2911@1|root,COG0729@2|Bacteria,COG2911@2|Bacteria,1N928@1224|Proteobacteria	1224|Proteobacteria	M	Chaperone of endosialidase	-	-	-	-	-	-	-	-	-	-	-	-	Peptidase_S74
DYD3_k127_3917091_3	1201288.M900_A0170	6.695e-120	395.0	COG0270@1|root,COG0270@2|Bacteria,1MV9H@1224|Proteobacteria,42SDU@68525|delta/epsilon subdivisions,2WQ2F@28221|Deltaproteobacteria	28221|Deltaproteobacteria	H	PFAM C-5 cytosine-specific DNA methylase	dcm	-	2.1.1.37	ko:K00558	ko00270,ko01100,ko05206,map00270,map01100,map05206	M00035	R04858	RC00003,RC00332	ko00000,ko00001,ko00002,ko01000,ko02048,ko03032,ko03036	-	-	-	DNA_methylase
DYD3_k127_3917091_2	247490.KSU1_B0212	5.006e-132	433.0	COG2211@1|root,COG2211@2|Bacteria	2|Bacteria	G	Major facilitator Superfamily	ampG	-	-	ko:K08218	ko01501,map01501	M00628	-	-	ko00000,ko00001,ko00002,ko02000	2.A.1.25	-	-	Acatn,MFS_1
DYD3_k127_3917091_10	673862.BABL1_886	6.36e-11	74.0	COG0666@1|root,COG0666@2|Bacteria,1RBYV@1224|Proteobacteria,42TI1@68525|delta/epsilon subdivisions,2WQ9N@28221|Deltaproteobacteria	28221|Deltaproteobacteria	S	PFAM Ankyrin	-	-	-	-	-	-	-	-	-	-	-	-	Ank,Ank_2,Ank_3,Ank_4,Ank_5
DYD3_k127_3917091_4	1219076.N646_0291	1.767e-97	325.0	2BVTQ@1|root,2Z7J9@2|Bacteria,1P01Z@1224|Proteobacteria,1RNNB@1236|Gammaproteobacteria,1XT57@135623|Vibrionales	135623|Vibrionales	S	Protein of unknown function (DUF2797)	LA2027	-	-	-	-	-	-	-	-	-	-	-	DUF2797
DYD3_k127_3917091_0	862908.BMS_1212	1.741e-257	820.0	COG0308@1|root,COG0308@2|Bacteria,1MUCI@1224|Proteobacteria,42KZI@68525|delta/epsilon subdivisions,2MSTB@213481|Bdellovibrionales,2WJ2C@28221|Deltaproteobacteria	213481|Bdellovibrionales	E	Peptidase M1 membrane alanine aminopeptidase	pepN	-	3.4.11.2	ko:K01256,ko:K08776	ko00480,ko01100,map00480,map01100	-	R00899,R04951	RC00096,RC00141	ko00000,ko00001,ko01000,ko01002	-	-	-	DUF3458,DUF3458_C,ERAP1_C,HEAT_2,Peptidase_M1
DYD3_k127_3917091_1	504472.Slin_5879	1.583e-149	486.0	COG1057@1|root,COG1057@2|Bacteria,4NEIR@976|Bacteroidetes,47KX5@768503|Cytophagia	976|Bacteroidetes	H	Nicotinate-nucleotide adenylyltransferase	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_3917091_6	1033733.CAEK01000021_gene425	2.337e-25	111.0	COG0350@1|root,COG0350@2|Bacteria,1VA03@1239|Firmicutes,24JAA@186801|Clostridia,22HPS@1570339|Peptoniphilaceae	186801|Clostridia	L	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated	ogt	-	2.1.1.63	ko:K00567	-	-	-	-	ko00000,ko01000,ko03400	-	-	-	DNA_binding_1,Methyltransf_1N
DYD3_k127_3917091_5	1201288.M900_1079	1.048e-46	179.0	COG0095@1|root,COG0095@2|Bacteria,1N1T8@1224|Proteobacteria,42QHH@68525|delta/epsilon subdivisions,2MTSA@213481|Bdellovibrionales,2WMEX@28221|Deltaproteobacteria	213481|Bdellovibrionales	H	Catalyzes both the ATP-dependent activation of exogenously supplied lipoate to lipoyl-AMP and the transfer of the activated lipoyl onto the lipoyl domains of lipoate-dependent enzymes	lplA	-	6.3.1.20	ko:K03800	ko00785,ko01100,map00785,map01100	-	R07770,R07771,R11143	RC00043,RC00070,RC00090,RC00992,RC02896	ko00000,ko00001,ko01000	-	-	-	BPL_LplA_LipB,Lip_prot_lig_C
DYD3_k127_3917091_8	1353529.M899_0700	3.349e-22	96.0	COG0267@1|root,COG0267@2|Bacteria,1Q1V0@1224|Proteobacteria,437HE@68525|delta/epsilon subdivisions,2MTDQ@213481|Bdellovibrionales,2X2QY@28221|Deltaproteobacteria	213481|Bdellovibrionales	J	Ribosomal protein L33	rpmG	-	-	ko:K02913	ko03010,map03010	M00178	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_L33
DYD3_k127_4005458_0	883078.HMPREF9695_01635	6.062e-169	536.0	COG3049@1|root,COG3049@2|Bacteria,1MWPQ@1224|Proteobacteria,2TTPI@28211|Alphaproteobacteria,3JXEU@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	Linear amide C-N hydrolases, choloylglycine hydrolase family	-	-	3.5.1.24	ko:K01442	ko00120,ko00121,ko01100,map00120,map00121,map01100	-	R02797,R03975,R03977,R04486,R04487,R05835	RC00090,RC00096	ko00000,ko00001,ko01000	-	-	-	CBAH
DYD3_k127_4005458_1	1123248.KB893315_gene3212	2.146e-122	411.0	COG0642@1|root,COG5002@1|root,COG2205@2|Bacteria,COG5002@2|Bacteria,4PKPQ@976|Bacteroidetes	976|Bacteroidetes	T	PAS domain	-	-	-	-	-	-	-	-	-	-	-	-	HATPase_c,HisKA,PAS_9
DYD3_k127_4005458_3	1121124.JNIX01000001_gene1039	1.231e-42	164.0	COG1418@1|root,COG1418@2|Bacteria	2|Bacteria	S	mRNA catabolic process	-	-	-	ko:K06950	-	-	-	-	ko00000	-	-	-	HD
DYD3_k127_4005458_2	225849.swp_2998	9.466e-46	177.0	2EYU1@1|root,33S18@2|Bacteria,1NU2Q@1224|Proteobacteria,1SJQN@1236|Gammaproteobacteria	1236|Gammaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_4050162_34	684719.HIMB114_00006090	4.452e-08	57.0	COG0649@1|root,COG0649@2|Bacteria,1MVIN@1224|Proteobacteria,2TQZ0@28211|Alphaproteobacteria,4BPED@82117|unclassified Alphaproteobacteria	28211|Alphaproteobacteria	C	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient	nuoD	GO:0003674,GO:0003824,GO:0003954,GO:0008150,GO:0008152,GO:0016491,GO:0016651,GO:0016655,GO:0050136,GO:0055114	1.6.5.3	ko:K00333	ko00190,ko01100,map00190,map01100	M00144	R11945	RC00061	ko00000,ko00001,ko00002,ko01000	3.D.1	-	-	Complex1_49kDa
DYD3_k127_4050162_37	1262449.CP6013_2895	0.0005888	47.0	COG1036@1|root,COG1180@1|root,COG1036@2|Bacteria,COG1180@2|Bacteria,1UM0H@1239|Firmicutes,25G8F@186801|Clostridia,36HMU@31979|Clostridiaceae	186801|Clostridia	CO	4Fe-4S binding domain	-	-	1.3.7.1	ko:K20449	ko00760,ko01120,map00760,map01120	-	R03164	RC02422	ko00000,ko00001,ko01000	-	-	-	Fer4
DYD3_k127_4050162_23	379066.GAU_0166	4.911e-46	180.0	COG1398@1|root,COG1398@2|Bacteria,1ZT9N@142182|Gemmatimonadetes	142182|Gemmatimonadetes	I	Fatty acid desaturase	-	-	1.14.19.1	ko:K00507	ko01040,ko01212,ko03320,ko04152,ko04212,map01040,map01212,map03320,map04152,map04212	-	R02222	RC00917	ko00000,ko00001,ko01000,ko01004	-	-	-	-
DYD3_k127_4050162_16	862908.BMS_2247	1.56e-67	237.0	COG2360@1|root,COG2360@2|Bacteria,1R9W8@1224|Proteobacteria,42QRC@68525|delta/epsilon subdivisions,2MT14@213481|Bdellovibrionales,2WMP7@28221|Deltaproteobacteria	213481|Bdellovibrionales	O	Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine	aat	-	2.3.2.6	ko:K00684	-	-	R03813,R11443,R11444	RC00055,RC00064	ko00000,ko01000	-	-	-	Leu_Phe_trans
DYD3_k127_4050162_9	1201290.M902_2653	1.762e-106	356.0	COG0010@1|root,COG0010@2|Bacteria,1MVFH@1224|Proteobacteria,42MXZ@68525|delta/epsilon subdivisions,2WJWG@28221|Deltaproteobacteria	28221|Deltaproteobacteria	E	Belongs to the arginase family	-	-	3.5.3.1	ko:K01476	ko00220,ko00330,ko01100,ko01110,ko01130,ko01230,ko05146,map00220,map00330,map01100,map01110,map01130,map01230,map05146	M00029,M00134	R00551	RC00024,RC00329	ko00000,ko00001,ko00002,ko01000	-	-	-	Arginase
DYD3_k127_4050162_21	862908.BMS_2245	1.869e-48	185.0	COG1052@1|root,COG1052@2|Bacteria,1P7KV@1224|Proteobacteria	1224|Proteobacteria	CH	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain	-	-	1.1.1.399,1.1.1.95	ko:K00058	ko00260,ko00680,ko01100,ko01120,ko01130,ko01200,ko01230,map00260,map00680,map01100,map01120,map01130,map01200,map01230	M00020	R01513	RC00031	ko00000,ko00001,ko00002,ko01000,ko04147	-	-	-	2-Hacid_dh_C
DYD3_k127_4050162_7	862908.BMS_2243	2.547e-118	385.0	COG0024@1|root,COG0024@2|Bacteria,1MU99@1224|Proteobacteria,42MM5@68525|delta/epsilon subdivisions,2MSX1@213481|Bdellovibrionales,2WJMN@28221|Deltaproteobacteria	213481|Bdellovibrionales	J	TIGRFAM methionine aminopeptidase, type I	map	-	3.4.11.18	ko:K01265	-	-	-	-	ko00000,ko01000,ko01002	-	-	-	Peptidase_M24,SEC-C
DYD3_k127_4050162_33	1200567.JNKD01000031_gene1951	6.541e-09	66.0	COG0694@1|root,COG0822@1|root,COG0694@2|Bacteria,COG0822@2|Bacteria,1RD5K@1224|Proteobacteria,1S3P1@1236|Gammaproteobacteria,1Y4C9@135624|Aeromonadales	135624|Aeromonadales	C	A scaffold on which IscS assembles Fe-S clusters. It is likely that Fe-S cluster coordination is flexible as the role of this complex is to build and then hand off Fe-S clusters	-	-	-	ko:K13819	-	-	-	-	ko00000	-	-	-	Fer2_BFD,NifU,NifU_N
DYD3_k127_4050162_12	1353529.M899_2332	2.83e-94	316.0	COG0805@1|root,COG0805@2|Bacteria,1MVAY@1224|Proteobacteria,42MM7@68525|delta/epsilon subdivisions,2MT26@213481|Bdellovibrionales,2WKJW@28221|Deltaproteobacteria	213481|Bdellovibrionales	U	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides	tatC	-	-	ko:K03118	ko03060,ko03070,map03060,map03070	M00336	-	-	ko00000,ko00001,ko00002,ko02044	2.A.64	-	-	TatC
DYD3_k127_4050162_11	283942.IL1212	4.063e-103	344.0	COG0010@1|root,COG0010@2|Bacteria,1MVFH@1224|Proteobacteria,1RMH5@1236|Gammaproteobacteria,2QFSB@267893|Idiomarinaceae	1236|Gammaproteobacteria	E	Belongs to the arginase family	speB	GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006576,GO:0006595,GO:0006596,GO:0006807,GO:0008150,GO:0008152,GO:0008783,GO:0009058,GO:0009308,GO:0009309,GO:0009445,GO:0009446,GO:0009987,GO:0016787,GO:0016810,GO:0016813,GO:0030145,GO:0034641,GO:0042401,GO:0043167,GO:0043169,GO:0044106,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046872,GO:0046914,GO:0071704,GO:0097164,GO:1901564,GO:1901566,GO:1901576	3.5.3.1,3.5.3.11,3.5.3.17,3.5.3.7,3.5.3.8	ko:K01476,ko:K01479,ko:K01480,ko:K12255,ko:K18459	ko00220,ko00330,ko00340,ko01100,ko01110,ko01130,ko01230,ko05146,map00220,map00330,map00340,map01100,map01110,map01130,map01230,map05146	M00029,M00045,M00133,M00134	R00551,R01157,R01990,R02285	RC00024,RC00221,RC00329,RC00681	ko00000,ko00001,ko00002,ko01000	-	-	iB21_1397.B21_02730,iECB_1328.ECB_02767,iECD_1391.ECD_02767,iSbBS512_1146.SbBS512_E3370	Arginase
DYD3_k127_4050162_15	395493.BegalDRAFT_1570	1.859e-74	259.0	COG0421@1|root,COG0421@2|Bacteria,1MVV5@1224|Proteobacteria,1RMUT@1236|Gammaproteobacteria,460UY@72273|Thiotrichales	72273|Thiotrichales	E	Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine	speE	-	2.5.1.16	ko:K00797	ko00270,ko00330,ko00410,ko00480,ko01100,map00270,map00330,map00410,map00480,map01100	M00034,M00133	R01920,R02869,R08359	RC00021,RC00053	ko00000,ko00001,ko00002,ko01000	-	-	-	Spermine_synt_N,Spermine_synth
DYD3_k127_4050162_6	862908.BMS_2236	1.574e-121	398.0	COG0451@1|root,COG0451@2|Bacteria,1MVE4@1224|Proteobacteria,42MC1@68525|delta/epsilon subdivisions,2MSPZ@213481|Bdellovibrionales,2WJ24@28221|Deltaproteobacteria	213481|Bdellovibrionales	GM	Catalyzes the interconversion between ADP-D-glycero- beta-D-manno-heptose and ADP-L-glycero-beta-D-manno-heptose via an epimerization at carbon 6 of the heptose	hldD	-	5.1.3.20	ko:K03274	ko00540,ko01100,map00540,map01100	M00064	R05176	RC01291	ko00000,ko00001,ko00002,ko01000,ko01005	-	-	-	Epimerase
DYD3_k127_4050162_32	314230.DSM3645_28702	1.333e-10	68.0	COG1536@1|root,COG1536@2|Bacteria,2IX0X@203682|Planctomycetes	203682|Planctomycetes	N	flagellar motor switch protein	fliG	-	-	ko:K02410	ko02030,ko02040,map02030,map02040	-	-	-	ko00000,ko00001,ko02035	-	-	-	FliG_C,FliG_M,FliG_N
DYD3_k127_4050162_26	862908.BMS_1274	3.463e-24	108.0	COG1734@1|root,COG1734@2|Bacteria,1RD08@1224|Proteobacteria,42W0Y@68525|delta/epsilon subdivisions,2MUQ8@213481|Bdellovibrionales,2WS69@28221|Deltaproteobacteria	213481|Bdellovibrionales	T	Prokaryotic dksA/traR C4-type zinc finger	-	-	-	ko:K06204	ko02026,map02026	-	-	-	ko00000,ko00001,ko03000,ko03009,ko03021	-	-	-	zf-dskA_traR
DYD3_k127_4050162_3	1415774.U728_1911	2.131e-152	503.0	COG0326@1|root,COG0326@2|Bacteria,1TQEU@1239|Firmicutes,247ND@186801|Clostridia,36DJ5@31979|Clostridiaceae	186801|Clostridia	O	Molecular chaperone. Has ATPase activity	htpG	-	-	ko:K04079	ko04141,ko04151,ko04217,ko04612,ko04621,ko04626,ko04657,ko04659,ko04914,ko04915,ko05200,ko05215,ko05418,map04141,map04151,map04217,map04612,map04621,map04626,map04657,map04659,map04914,map04915,map05200,map05215,map05418	-	-	-	ko00000,ko00001,ko01009,ko03029,ko03051,ko03110,ko04131,ko04147	-	-	-	HATPase_c,HATPase_c_3,HSP90
DYD3_k127_4050162_17	264462.Bd3633	1.055e-60	216.0	COG0252@1|root,COG0252@2|Bacteria,1RHAW@1224|Proteobacteria,42SNH@68525|delta/epsilon subdivisions,2MTW1@213481|Bdellovibrionales,2WPQC@28221|Deltaproteobacteria	213481|Bdellovibrionales	EJ	PFAM Asparaginase	aspG	-	3.5.1.1	ko:K01424	ko00250,ko00460,ko01100,ko01110,map00250,map00460,map01100,map01110	-	R00485	RC00010,RC02798	ko00000,ko00001,ko01000	-	-	-	Asparaginase
DYD3_k127_4050162_18	1453500.AT05_00405	3.501e-57	209.0	28JIP@1|root,2Z82C@2|Bacteria,4NFN9@976|Bacteroidetes,1HZ0J@117743|Flavobacteriia	976|Bacteroidetes	S	S1 P1 nuclease	-	-	-	-	-	-	-	-	-	-	-	-	S1-P1_nuclease
DYD3_k127_4050162_20	1353529.M899_2305	4.377e-50	181.0	COG0346@1|root,COG0346@2|Bacteria,1RCYU@1224|Proteobacteria,42URG@68525|delta/epsilon subdivisions,2WNDG@28221|Deltaproteobacteria	28221|Deltaproteobacteria	E	PFAM Glyoxalase bleomycin resistance protein dioxygenase	mceE	-	5.1.99.1	ko:K05606	ko00280,ko00630,ko00640,ko00720,ko01100,ko01120,ko01200,map00280,map00630,map00640,map00720,map01100,map01120,map01200	M00373,M00375,M00376,M00741	R02765,R09979	RC00780,RC02739	ko00000,ko00001,ko00002,ko01000	-	-	-	Glyoxalase_4
DYD3_k127_4050162_19	862908.BMS_1284	5.298e-52	192.0	COG0705@1|root,COG0705@2|Bacteria,1PD2F@1224|Proteobacteria,42XIJ@68525|delta/epsilon subdivisions,2MT85@213481|Bdellovibrionales,2WT8Q@28221|Deltaproteobacteria	213481|Bdellovibrionales	S	Eukaryotic integral membrane protein (DUF1751)	-	-	-	-	-	-	-	-	-	-	-	-	Rhomboid
DYD3_k127_4050162_27	1201288.M900_1735	4.577e-22	101.0	COG1580@1|root,COG1580@2|Bacteria	2|Bacteria	N	Controls the rotational direction of flagella during chemotaxis	fliL	-	-	ko:K02415	-	-	-	-	ko00000,ko02035	-	-	-	FliL
DYD3_k127_4050162_1	1201288.M900_1733	1.699e-193	608.0	COG0686@1|root,COG0686@2|Bacteria,1QTX1@1224|Proteobacteria,42MSF@68525|delta/epsilon subdivisions,2MSTF@213481|Bdellovibrionales,2WKJ5@28221|Deltaproteobacteria	213481|Bdellovibrionales	C	Belongs to the AlaDH PNT family	ald	-	1.4.1.1	ko:K00259	ko00250,ko00430,ko01100,map00250,map00430,map01100	-	R00396	RC00008	ko00000,ko00001,ko01000	-	-	iAF987.Gmet_1099	AlaDh_PNT_C,AlaDh_PNT_N
DYD3_k127_4050162_14	1353529.M899_0484	1.359e-74	262.0	COG1235@1|root,COG1235@2|Bacteria,1MVJH@1224|Proteobacteria,42Q0E@68525|delta/epsilon subdivisions,2WITX@28221|Deltaproteobacteria	28221|Deltaproteobacteria	S	Metallo-beta-lactamase superfamily	-	-	3.1.4.55	ko:K06167	ko00440,map00440	-	R10205	RC00296	ko00000,ko00001,ko01000	-	-	-	Lactamase_B_2
DYD3_k127_4050162_4	1201288.M900_1731	1.03e-126	421.0	COG0612@1|root,COG0612@2|Bacteria,1MVST@1224|Proteobacteria,42N0H@68525|delta/epsilon subdivisions,2MTSX@213481|Bdellovibrionales,2WK9P@28221|Deltaproteobacteria	213481|Bdellovibrionales	S	Peptidase M16	-	-	-	ko:K07263	-	-	-	-	ko00000,ko01000,ko01002	-	-	-	Peptidase_M16,Peptidase_M16_C
DYD3_k127_4050162_10	1353529.M899_0481	3.25e-103	351.0	COG0612@1|root,COG0612@2|Bacteria,1MU6R@1224|Proteobacteria,42M74@68525|delta/epsilon subdivisions,2MU8A@213481|Bdellovibrionales,2WR3G@28221|Deltaproteobacteria	213481|Bdellovibrionales	S	Peptidase M16 inactive domain	-	-	-	ko:K07263	-	-	-	-	ko00000,ko01000,ko01002	-	-	-	Peptidase_M16,Peptidase_M16_C
DYD3_k127_4050162_30	742767.HMPREF9456_00873	6.155e-12	70.0	COG1664@1|root,COG1664@2|Bacteria,4NUZA@976|Bacteroidetes,2FUPU@200643|Bacteroidia,22YMZ@171551|Porphyromonadaceae	976|Bacteroidetes	M	Integral membrane protein CcmA involved in cell shape determination	-	-	-	-	-	-	-	-	-	-	-	-	Bactofilin
DYD3_k127_4050162_8	1353529.M899_0478	1.151e-106	355.0	COG3034@1|root,COG3034@2|Bacteria,1N2B6@1224|Proteobacteria,42QS4@68525|delta/epsilon subdivisions,2MT2W@213481|Bdellovibrionales,2WPZF@28221|Deltaproteobacteria	213481|Bdellovibrionales	S	L,D-transpeptidase catalytic domain	-	-	-	-	-	-	-	-	-	-	-	-	YkuD
DYD3_k127_4050162_25	1201288.M900_1726	3.801e-33	147.0	COG4372@1|root,COG4372@2|Bacteria,1P7F1@1224|Proteobacteria,433M5@68525|delta/epsilon subdivisions,2MTDR@213481|Bdellovibrionales,2WXQI@28221|Deltaproteobacteria	213481|Bdellovibrionales	S	Transposase	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_4050162_22	862908.BMS_1301	9.126e-47	185.0	COG2199@1|root,COG3706@2|Bacteria,1R7HC@1224|Proteobacteria,42UHW@68525|delta/epsilon subdivisions,2MTJ4@213481|Bdellovibrionales,2WQ01@28221|Deltaproteobacteria	213481|Bdellovibrionales	T	Diguanylate cyclase	-	-	-	-	-	-	-	-	-	-	-	-	GGDEF,Response_reg
DYD3_k127_4050162_24	264462.Bd3677	4.95e-38	149.0	COG2808@1|root,COG2808@2|Bacteria,1N1B9@1224|Proteobacteria,42WNY@68525|delta/epsilon subdivisions,2MUJQ@213481|Bdellovibrionales,2WRMA@28221|Deltaproteobacteria	213481|Bdellovibrionales	K	Putative FMN-binding domain	paiB	-	-	ko:K07734	-	-	-	-	ko00000,ko03000	-	-	-	FMN_bind_2
DYD3_k127_4050162_38	388467.A19Y_1282	0.0009216	50.0	COG1403@1|root,COG1403@2|Bacteria,1G7VH@1117|Cyanobacteria,1HCI7@1150|Oscillatoriales	1117|Cyanobacteria	L	PFAM HNH endonuclease	-	-	-	ko:K07451	-	-	-	-	ko00000,ko01000,ko02048	-	-	-	HNH,HNH_5
DYD3_k127_4050162_0	862908.BMS_1312	1.93e-194	623.0	COG0171@1|root,COG0388@1|root,COG0171@2|Bacteria,COG0388@2|Bacteria,1MU9U@1224|Proteobacteria,42N86@68525|delta/epsilon subdivisions,2MTTJ@213481|Bdellovibrionales,2WIV4@28221|Deltaproteobacteria	213481|Bdellovibrionales	H	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source	nadE	-	6.3.5.1	ko:K01950	ko00760,ko01100,map00760,map01100	M00115	R00257	RC00010,RC00100	ko00000,ko00001,ko00002,ko01000	-	-	-	CN_hydrolase,NAD_synthase
DYD3_k127_4050162_2	862908.BMS_1313	6.215e-189	600.0	COG1206@1|root,COG1206@2|Bacteria,1MWNQ@1224|Proteobacteria,42MTS@68525|delta/epsilon subdivisions,2MSTY@213481|Bdellovibrionales,2WJ50@28221|Deltaproteobacteria	213481|Bdellovibrionales	J	Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs	trmFO	GO:0000166,GO:0001510,GO:0002097,GO:0002098,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0048037,GO:0050660,GO:0050662,GO:0071704,GO:0090304,GO:0097159,GO:1901265,GO:1901360,GO:1901363	2.1.1.74	ko:K04094	-	-	-	-	ko00000,ko01000,ko03016,ko03036	-	-	-	GIDA
DYD3_k127_4050162_13	1353529.M899_0462	8.71e-86	293.0	COG0697@1|root,COG0697@2|Bacteria,1RDQ0@1224|Proteobacteria,42ZI8@68525|delta/epsilon subdivisions,2MTV4@213481|Bdellovibrionales,2WUWQ@28221|Deltaproteobacteria	213481|Bdellovibrionales	EG	EamA-like transporter family	-	-	-	-	-	-	-	-	-	-	-	-	EamA
DYD3_k127_4056502_13	264462.Bd2137	1.49e-13	76.0	2AIQJ@1|root,3197A@2|Bacteria,1Q1YP@1224|Proteobacteria,437KN@68525|delta/epsilon subdivisions,2MU22@213481|Bdellovibrionales,2X2US@28221|Deltaproteobacteria	213481|Bdellovibrionales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_4056502_7	264462.Bd2462	5.242e-46	173.0	COG0741@1|root,COG0741@2|Bacteria,1N1GB@1224|Proteobacteria,42X1K@68525|delta/epsilon subdivisions,2MTCK@213481|Bdellovibrionales,2WTCI@28221|Deltaproteobacteria	213481|Bdellovibrionales	M	COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM invasin domains)	-	-	-	ko:K08309	-	-	-	-	ko00000,ko01000,ko01011	-	GH23	-	SLT
DYD3_k127_4056502_1	1121924.ATWH01000002_gene3895	4.157e-150	488.0	COG3011@1|root,COG3011@2|Bacteria,2GMSU@201174|Actinobacteria,4FKMH@85023|Microbacteriaceae	201174|Actinobacteria	S	Lipase maturation factor	LMF	-	-	-	-	-	-	-	-	-	-	-	LMF1
DYD3_k127_4056502_6	983545.Glaag_3423	2.987e-46	169.0	COG1803@1|root,COG1803@2|Bacteria,1RD3D@1224|Proteobacteria,1S3XN@1236|Gammaproteobacteria,46733@72275|Alteromonadaceae	1236|Gammaproteobacteria	G	methylglyoxal synthase	mgsA	GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006081,GO:0008150,GO:0008152,GO:0008929,GO:0009058,GO:0009438,GO:0009987,GO:0016829,GO:0016835,GO:0016838,GO:0019242,GO:0042180,GO:0042181,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046184,GO:0071704,GO:1901576	4.2.3.3	ko:K01734	ko00640,ko01120,map00640,map01120	-	R01016	RC00424	ko00000,ko00001,ko01000	-	-	iECUMN_1333.ECUMN_1153,iYL1228.KPN_00992	MGS
DYD3_k127_4056502_5	1201288.M900_2187	3.212e-64	253.0	COG3210@1|root,COG5295@1|root,COG3210@2|Bacteria,COG5295@2|Bacteria,1N0C9@1224|Proteobacteria	1224|Proteobacteria	UW	YadA-like membrane anchor domain	-	-	-	ko:K12342	ko03070,map03070	-	-	-	ko00000,ko00001,ko02044	1.B.40.1.3,1.B.40.1.4	-	-	YadA_anchor,YadA_stalk
DYD3_k127_4056502_9	439235.Dalk_0659	3.952e-35	138.0	COG2199@1|root,COG3706@2|Bacteria,1N0N3@1224|Proteobacteria,43E7J@68525|delta/epsilon subdivisions,2X7JX@28221|Deltaproteobacteria	28221|Deltaproteobacteria	T	cheY-homologous receiver domain	-	-	-	ko:K03413	ko02020,ko02030,map02020,map02030	M00506	-	-	ko00000,ko00001,ko00002,ko02022,ko02035	-	-	-	Response_reg
DYD3_k127_4056502_8	1184267.A11Q_303	6.7e-41	161.0	COG1406@1|root,COG1406@2|Bacteria,1RATZ@1224|Proteobacteria,42R2Q@68525|delta/epsilon subdivisions,2MU8P@213481|Bdellovibrionales,2WP6F@28221|Deltaproteobacteria	213481|Bdellovibrionales	N	PFAM CheC domain protein	-	-	-	ko:K03409	ko02030,map02030	-	-	-	ko00000,ko00001,ko02035	-	-	-	CheX
DYD3_k127_4056502_3	1121904.ARBP01000010_gene2266	2.463e-75	260.0	COG1611@1|root,COG1611@2|Bacteria,4NF20@976|Bacteroidetes,47KCT@768503|Cytophagia	976|Bacteroidetes	S	Belongs to the LOG family	-	-	3.2.2.10	ko:K06966	ko00230,ko00240,map00230,map00240	-	R00182,R00510	RC00063,RC00318	ko00000,ko00001,ko01000	-	-	-	Lysine_decarbox
DYD3_k127_4056502_14	1278073.MYSTI_01292	1.632e-08	65.0	COG1196@1|root,COG1196@2|Bacteria,1NF14@1224|Proteobacteria,431HW@68525|delta/epsilon subdivisions,2WWNN@28221|Deltaproteobacteria	28221|Deltaproteobacteria	D	nuclear chromosome segregation	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_4056502_10	717774.Marme_3837	2.071e-29	129.0	COG0697@1|root,COG0697@2|Bacteria,1RDQ0@1224|Proteobacteria,1SNBH@1236|Gammaproteobacteria	1236|Gammaproteobacteria	EG	EamA-like transporter family	-	-	-	-	-	-	-	-	-	-	-	-	EamA
DYD3_k127_4056502_4	264462.Bd1950	5.658e-73	256.0	COG1619@1|root,COG1619@2|Bacteria,1MWIY@1224|Proteobacteria,42Q52@68525|delta/epsilon subdivisions,2WJ3S@28221|Deltaproteobacteria	28221|Deltaproteobacteria	V	PFAM peptidase U61, LD-carboxypeptidase A	-	-	3.4.17.13	ko:K01297	-	-	-	-	ko00000,ko01000,ko01002,ko01011	-	-	-	Peptidase_S66
DYD3_k127_4056502_15	158189.SpiBuddy_2817	4.891e-06	55.0	COG1011@1|root,COG1011@2|Bacteria,2JBH2@203691|Spirochaetes	203691|Spirochaetes	S	Haloacid dehalogenase-like hydrolase	-	-	-	ko:K07025	-	-	-	-	ko00000	-	-	-	HAD_2
DYD3_k127_4056502_12	1449976.KALB_1762	1.097e-15	90.0	COG3568@1|root,COG3568@2|Bacteria,2IEQF@201174|Actinobacteria	201174|Actinobacteria	S	GH3 auxin-responsive promoter	-	-	-	-	-	-	-	-	-	-	-	-	GH3
DYD3_k127_4056502_2	69328.PVLB_05250	2.38e-125	425.0	COG1629@1|root,COG4771@2|Bacteria,1QTS8@1224|Proteobacteria,1T1FF@1236|Gammaproteobacteria	1236|Gammaproteobacteria	P	Outer membrane receptor proteins mostly Fe transport	irp	-	-	ko:K02014	-	-	-	-	ko00000,ko02000	1.B.14	-	-	CarboxypepD_reg,Plug,TonB_dep_Rec
DYD3_k127_4056502_11	862908.BMS_2333	4.383e-25	110.0	COG0735@1|root,COG0735@2|Bacteria,1NEZS@1224|Proteobacteria,43A7K@68525|delta/epsilon subdivisions,2MU7D@213481|Bdellovibrionales,2X9ZJ@28221|Deltaproteobacteria	213481|Bdellovibrionales	K	Ferric uptake regulator family	-	-	-	ko:K03711	-	-	-	-	ko00000,ko03000	-	-	-	FUR
DYD3_k127_4056502_0	1353529.M899_3037	0.0	1550.0	COG2931@1|root,COG3391@1|root,COG4932@1|root,COG2931@2|Bacteria,COG3391@2|Bacteria,COG4932@2|Bacteria,1MU7T@1224|Proteobacteria,42R1I@68525|delta/epsilon subdivisions,2MTRA@213481|Bdellovibrionales,2WMVI@28221|Deltaproteobacteria	213481|Bdellovibrionales	Q	COG2931, RTX toxins and related Ca2 -binding proteins	-	-	-	ko:K20276	ko02024,map02024	-	-	-	ko00000,ko00001	-	-	-	DUF4215
DYD3_k127_4072052_2	1353529.M899_1176	4.982e-216	684.0	COG0608@1|root,COG0608@2|Bacteria,1MU1M@1224|Proteobacteria,42MYF@68525|delta/epsilon subdivisions,2MSZ0@213481|Bdellovibrionales,2WJE3@28221|Deltaproteobacteria	213481|Bdellovibrionales	L	single-stranded-DNA-specific exonuclease RecJ	recJ	-	-	ko:K07462	ko03410,ko03430,ko03440,map03410,map03430,map03440	-	-	-	ko00000,ko00001,ko01000,ko03400	-	-	-	DHH,DHHA1
DYD3_k127_4072052_4	983917.RGE_32140	1.459e-66	237.0	COG1680@1|root,COG1680@2|Bacteria,1RBWE@1224|Proteobacteria,2W0TX@28216|Betaproteobacteria	28216|Betaproteobacteria	V	COG1680 Beta-lactamase class C and other penicillin binding	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_4072052_0	264462.Bd1010	6.023e-238	754.0	COG0855@1|root,COG0855@2|Bacteria,1MUM3@1224|Proteobacteria,42NN7@68525|delta/epsilon subdivisions,2MTKJ@213481|Bdellovibrionales,2WJG7@28221|Deltaproteobacteria	213481|Bdellovibrionales	H	Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)	ppk	-	2.7.4.1	ko:K00937	ko00190,ko03018,map00190,map03018	-	-	-	ko00000,ko00001,ko01000,ko03019	-	-	-	PP_kinase,PP_kinase_C,PP_kinase_N
DYD3_k127_4072052_8	395493.BegalDRAFT_2015	1.822e-14	79.0	COG2062@1|root,COG2062@2|Bacteria,1PKQP@1224|Proteobacteria,1SDUE@1236|Gammaproteobacteria	1236|Gammaproteobacteria	T	Phosphoglycerate mutase family	-	-	-	-	-	-	-	-	-	-	-	-	His_Phos_1
DYD3_k127_4072052_5	314345.SPV1_07149	2.446e-51	194.0	COG0248@1|root,COG0248@2|Bacteria,1MV35@1224|Proteobacteria	1224|Proteobacteria	FP	Catalyzes the conversion of pppGpp to ppGpp. Guanosine pentaphosphate (pppGpp) is a cytoplasmic signaling molecule which together with ppGpp controls the stringent response , an adaptive process that allows bacteria to respond to amino acid starvation, resulting in the coordinated regulation of numerous cellular activities	gppA	GO:0003674,GO:0003824,GO:0004309,GO:0005488,GO:0005515,GO:0006082,GO:0006139,GO:0006725,GO:0006793,GO:0006797,GO:0006798,GO:0006807,GO:0006950,GO:0007154,GO:0008150,GO:0008152,GO:0008894,GO:0009056,GO:0009267,GO:0009605,GO:0009987,GO:0009991,GO:0015949,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0031667,GO:0031668,GO:0031669,GO:0033554,GO:0034641,GO:0042594,GO:0042802,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044281,GO:0046483,GO:0050896,GO:0051716,GO:0055086,GO:0071496,GO:0071704,GO:1901360,GO:1901575	3.6.1.11,3.6.1.40	ko:K01524	ko00230,map00230	-	R03409	RC00002	ko00000,ko00001,ko01000	-	-	iECABU_c1320.ECABU_c42590,iECED1_1282.ECED1_4463,iECIAI39_1322.ECIAI39_2643	HD,Ppx-GppA
DYD3_k127_4072052_3	1121373.KB903665_gene3094	5.037e-117	392.0	COG3515@1|root,COG3515@2|Bacteria	2|Bacteria	M	Protein conserved in bacteria	-	-	-	ko:K11891,ko:K11902,ko:K11910	ko02025,ko03070,map02025,map03070	M00334	-	-	ko00000,ko00001,ko00002,ko02044	3.A.23.1	-	-	ImcF-related_N,ImpA_N,OmpA
DYD3_k127_4072052_1	269798.CHU_1228	6.89e-223	696.0	COG0538@1|root,COG0538@2|Bacteria,4NDY2@976|Bacteroidetes,47MTA@768503|Cytophagia	976|Bacteroidetes	C	Belongs to the isocitrate and isopropylmalate dehydrogenases family	icd	-	1.1.1.42	ko:K00031	ko00020,ko00480,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01210,ko01230,ko04146,map00020,map00480,map00720,map01100,map01110,map01120,map01130,map01200,map01210,map01230,map04146	M00009,M00010,M00173,M00740	R00267,R00268,R01899	RC00001,RC00084,RC00114,RC00626,RC02801	br01601,ko00000,ko00001,ko00002,ko01000	-	-	-	Iso_dh
DYD3_k127_4072052_6	765869.BDW_01335	2.956e-47	183.0	COG1404@1|root,COG4935@1|root,COG1404@2|Bacteria,COG4935@2|Bacteria,1QU1I@1224|Proteobacteria,42V9S@68525|delta/epsilon subdivisions,2WRPK@28221|Deltaproteobacteria	28221|Deltaproteobacteria	O	Subtilase family	-	-	3.4.21.121	ko:K20755	-	-	-	-	ko00000,ko01000,ko01002	-	-	-	P_proprotein,Peptidase_S8
DYD3_k127_4072052_9	555778.Hneap_2214	1.19e-10	63.0	COG3547@1|root,COG3547@2|Bacteria,1QYJU@1224|Proteobacteria,1RN0A@1236|Gammaproteobacteria,1WZMA@135613|Chromatiales	135613|Chromatiales	L	transposase IS116 IS110 IS902 family	-	-	-	-	-	-	-	-	-	-	-	-	DEDD_Tnp_IS110,Transposase_20
DYD3_k127_40743_0	211165.AJLN01000100_gene4293	1.501e-170	544.0	arCOG06766@1|root,2Z87F@2|Bacteria,1G1NX@1117|Cyanobacteria,1JKSG@1189|Stigonemataceae	1117|Cyanobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_40743_2	667014.Thein_1542	8.107e-09	69.0	COG1033@1|root,COG1033@2|Bacteria,2GIBA@200940|Thermodesulfobacteria	200940|Thermodesulfobacteria	S	Patched family	-	-	-	ko:K07003	-	-	-	-	ko00000	-	-	-	MMPL
DYD3_k127_40743_1	1469607.KK073768_gene2434	1.332e-64	228.0	COG4638@1|root,COG4638@2|Bacteria,1G2UQ@1117|Cyanobacteria,1HM5N@1161|Nostocales	1117|Cyanobacteria	P	PFAM Rieske 2Fe-2S domain	hcaE	-	-	ko:K19982	ko00404,ko01130,map00404,map01130	M00790	R11107	RC01333	ko00000,ko00001,ko00002,ko01000	-	-	-	PaO,Rieske
DYD3_k127_4093622_1	862908.BMS_2142	2.977e-44	168.0	COG0276@1|root,COG0477@1|root,COG0276@2|Bacteria,COG2814@2|Bacteria,1MVR1@1224|Proteobacteria,42M0C@68525|delta/epsilon subdivisions,2MURR@213481|Bdellovibrionales,2X5EE@28221|Deltaproteobacteria	213481|Bdellovibrionales	EGHP	Catalyzes the ferrous insertion into protoporphyrin IX	hemH	-	-	-	-	-	-	-	-	-	-	-	Ferrochelatase,MFS_1
DYD3_k127_4093622_0	264462.Bd0087	1.515e-76	259.0	COG0780@1|root,COG0780@2|Bacteria,1MW0M@1224|Proteobacteria,42RDZ@68525|delta/epsilon subdivisions,2MSWM@213481|Bdellovibrionales,2WQ4Z@28221|Deltaproteobacteria	213481|Bdellovibrionales	S	Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)	queF	-	1.7.1.13	ko:K06879,ko:K09457	ko00790,ko01100,map00790,map01100	-	R07605	RC01875	ko00000,ko00001,ko01000,ko03016	-	-	-	QueF
DYD3_k127_4093622_3	862908.BMS_2144	1.052e-11	66.0	COG1826@1|root,COG1826@2|Bacteria,1NGDP@1224|Proteobacteria,42V5P@68525|delta/epsilon subdivisions,2WRM0@28221|Deltaproteobacteria	28221|Deltaproteobacteria	U	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system	-	-	-	ko:K03116	ko03060,ko03070,map03060,map03070	M00336	-	-	ko00000,ko00001,ko00002,ko02044	2.A.64	-	-	MttA_Hcf106
DYD3_k127_4093622_4	382464.ABSI01000011_gene3179	4.972e-07	63.0	COG0729@1|root,COG4372@1|root,COG0729@2|Bacteria,COG4372@2|Bacteria,46XNN@74201|Verrucomicrobia,2IW9I@203494|Verrucomicrobiae	203494|Verrucomicrobiae	M	surface antigen	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_4093622_2	862908.BMS_2153	1.311e-32	146.0	COG2911@1|root,COG3210@1|root,COG3420@1|root,COG5295@1|root,COG2911@2|Bacteria,COG3210@2|Bacteria,COG3420@2|Bacteria,COG5295@2|Bacteria,1NGFP@1224|Proteobacteria,43EIP@68525|delta/epsilon subdivisions,2MUTH@213481|Bdellovibrionales,2X8HE@28221|Deltaproteobacteria	213481|Bdellovibrionales	U	Chaperone of endosialidase	-	-	-	ko:K21449	-	-	-	-	ko00000,ko02000	1.B.40.2	-	-	Peptidase_S74
DYD3_k127_4109359_6	862908.BMS_2849	1.964e-17	82.0	COG1366@1|root,COG1366@2|Bacteria,1NG3I@1224|Proteobacteria,42W69@68525|delta/epsilon subdivisions,2MUAP@213481|Bdellovibrionales,2WS39@28221|Deltaproteobacteria	213481|Bdellovibrionales	T	Belongs to the anti-sigma-factor antagonist family	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_4109359_0	1201290.M902_0551	4.837e-100	344.0	COG4191@1|root,COG4191@2|Bacteria,1RCM9@1224|Proteobacteria,42Q3F@68525|delta/epsilon subdivisions,2MTPT@213481|Bdellovibrionales,2WM2F@28221|Deltaproteobacteria	213481|Bdellovibrionales	T	ATP-binding region ATPase domain protein	-	-	-	-	-	-	-	-	-	-	-	-	HATPase_c,HDOD,HisKA,Response_reg
DYD3_k127_4109359_4	862908.BMS_2846	2.009e-33	133.0	COG0745@1|root,COG0745@2|Bacteria	862908.BMS_2846|-	T	phosphorelay signal transduction system	-	-	-	ko:K03413	ko02020,ko02030,map02020,map02030	M00506	-	-	ko00000,ko00001,ko00002,ko02022,ko02035	-	-	-	-
DYD3_k127_4109359_3	1151127.KB906329_gene2554	4.455e-36	144.0	COG1280@1|root,COG1280@2|Bacteria,1RD4I@1224|Proteobacteria,1S52N@1236|Gammaproteobacteria,1YSPZ@136843|Pseudomonas fluorescens group	1236|Gammaproteobacteria	E	LysE type translocator	-	-	-	-	-	-	-	-	-	-	-	-	LysE
DYD3_k127_4109359_2	264462.Bd0663	7.707e-65	241.0	COG0840@1|root,COG0840@2|Bacteria,1MU9B@1224|Proteobacteria,42M22@68525|delta/epsilon subdivisions,2WM8F@28221|Deltaproteobacteria	28221|Deltaproteobacteria	NT	Chemotaxis sensory transducer	mcp64H-1	-	-	ko:K03406	ko02020,ko02030,map02020,map02030	-	-	-	ko00000,ko00001,ko02035	-	-	-	4HB_MCP_1,HAMP,MCPsignal,PAS_4,dCache_1
DYD3_k127_4109359_7	398578.Daci_3726	8.417e-14	78.0	COG3209@1|root,COG3209@2|Bacteria,1MVV1@1224|Proteobacteria,2VPNU@28216|Betaproteobacteria,4AFGQ@80864|Comamonadaceae	28216|Betaproteobacteria	M	TIGRFAM YD repeat protein	-	-	-	-	-	-	-	-	-	-	-	-	RHS,RHS_repeat
DYD3_k127_4109359_5	608506.COB47_2083	1.478e-20	100.0	COG2944@1|root,COG2944@2|Bacteria,1UZ9K@1239|Firmicutes,25EFY@186801|Clostridia,42HCR@68295|Thermoanaerobacterales	186801|Clostridia	K	PFAM helix-turn-helix domain protein	-	-	-	-	-	-	-	-	-	-	-	-	DUF4065,HTH_3,MqsA_antitoxin
DYD3_k127_4110160_5	1353529.M899_1369	9.335e-69	237.0	COG0220@1|root,COG0220@2|Bacteria,1MUWJ@1224|Proteobacteria,42M78@68525|delta/epsilon subdivisions,2MT89@213481|Bdellovibrionales,2WRKW@28221|Deltaproteobacteria	213481|Bdellovibrionales	J	Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA	trmB	GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008176,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016423,GO:0016740,GO:0016741,GO:0030488,GO:0032259,GO:0032991,GO:0034470,GO:0034641,GO:0034660,GO:0034708,GO:0036265,GO:0043170,GO:0043412,GO:0043414,GO:0043527,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0106004,GO:0140098,GO:0140101,GO:1901360,GO:1902494,GO:1990234	2.1.1.33	ko:K03439	-	-	-	-	ko00000,ko01000,ko03016	-	-	-	Methyltransf_4
DYD3_k127_4110160_3	1353529.M899_0330	3.883e-100	333.0	COG1344@1|root,COG1344@2|Bacteria,1MV1N@1224|Proteobacteria,42MX8@68525|delta/epsilon subdivisions,2WKE1@28221|Deltaproteobacteria	28221|Deltaproteobacteria	N	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella	fliC	-	-	ko:K02406	ko02020,ko02040,ko04621,ko04626,ko05132,ko05134,map02020,map02040,map04621,map04626,map05132,map05134	-	-	-	ko00000,ko00001,ko02035	-	-	-	Flagellin_C,Flagellin_IN,Flagellin_N
DYD3_k127_4110160_0	765869.BDW_06400	6.174e-137	445.0	COG0399@1|root,COG0399@2|Bacteria,1MUPN@1224|Proteobacteria,42M4C@68525|delta/epsilon subdivisions,2MTRR@213481|Bdellovibrionales,2WJ1Q@28221|Deltaproteobacteria	213481|Bdellovibrionales	E	Belongs to the DegT DnrJ EryC1 family	-	-	-	-	-	-	-	-	-	-	-	-	DegT_DnrJ_EryC1
DYD3_k127_4110160_12	1201288.M900_0395	1.138e-16	85.0	COG1051@1|root,COG1051@2|Bacteria	2|Bacteria	F	GDP-mannose mannosyl hydrolase activity	-	-	3.6.1.13,3.6.1.55,3.6.1.67	ko:K01515,ko:K03574,ko:K08310,ko:K19965	ko00230,ko00790,map00230,map00790	M00126	R01054,R04638	RC00002	ko00000,ko00001,ko00002,ko01000,ko03400	-	-	-	NUDIX
DYD3_k127_4110160_7	1201288.M900_0396	2.411e-57	207.0	COG1994@1|root,COG1994@2|Bacteria,1NSFF@1224|Proteobacteria,42STM@68525|delta/epsilon subdivisions,2MT4B@213481|Bdellovibrionales,2WPAD@28221|Deltaproteobacteria	213481|Bdellovibrionales	S	PFAM peptidase M50	-	-	-	-	-	-	-	-	-	-	-	-	Peptidase_M50
DYD3_k127_4110160_4	862908.BMS_0418	2.835e-81	279.0	COG1354@1|root,COG1354@2|Bacteria,1MVCN@1224|Proteobacteria,42RG5@68525|delta/epsilon subdivisions,2MT9G@213481|Bdellovibrionales,2WNRE@28221|Deltaproteobacteria	213481|Bdellovibrionales	D	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves	scpA	-	-	ko:K05896	-	-	-	-	ko00000,ko03036	-	-	-	SMC_ScpA
DYD3_k127_4110160_1	1201288.M900_0398	1.173e-118	397.0	COG1386@1|root,COG1386@2|Bacteria,1PUA6@1224|Proteobacteria,42SVD@68525|delta/epsilon subdivisions,2MT4G@213481|Bdellovibrionales,2WPFX@28221|Deltaproteobacteria	213481|Bdellovibrionales	D	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves	scpB	-	-	ko:K06024	-	-	-	-	ko00000,ko03036	-	-	-	SMC_ScpB
DYD3_k127_4110160_2	862908.BMS_0420	1.006e-105	354.0	COG1187@1|root,COG1187@2|Bacteria,1MUCE@1224|Proteobacteria,42NI7@68525|delta/epsilon subdivisions,2MT2N@213481|Bdellovibrionales,2WNPX@28221|Deltaproteobacteria	213481|Bdellovibrionales	J	Belongs to the pseudouridine synthase RsuA family	rluB	-	5.4.99.22	ko:K06178	-	-	-	-	ko00000,ko01000,ko03009	-	-	-	PseudoU_synth_2,S4
DYD3_k127_4110160_6	1144275.COCOR_07988	3.709e-62	228.0	COG1723@1|root,COG1723@2|Bacteria,1R8R9@1224|Proteobacteria,42W7V@68525|delta/epsilon subdivisions,2WS5C@28221|Deltaproteobacteria,2YZMK@29|Myxococcales	28221|Deltaproteobacteria	S	PFAM Uncharacterised ACR, YagE family COG1723	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_4110160_13	247633.GP2143_11944	1.173e-10	63.0	2DRA2@1|root,33AVQ@2|Bacteria,1NKZA@1224|Proteobacteria,1SH2Z@1236|Gammaproteobacteria	1236|Gammaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_4110160_8	862908.BMS_0771	1.396e-36	153.0	COG4974@1|root,COG4974@2|Bacteria,1QUFQ@1224|Proteobacteria,43CG3@68525|delta/epsilon subdivisions,2X7R3@28221|Deltaproteobacteria	28221|Deltaproteobacteria	L	Belongs to the 'phage' integrase family	-	-	-	-	-	-	-	-	-	-	-	-	Arm-DNA-bind_3,Phage_int_SAM_3,Phage_integrase
DYD3_k127_4112658_0	1201290.M902_1207	0.0	1084.0	COG0022@1|root,COG1071@1|root,COG0022@2|Bacteria,COG1071@2|Bacteria,1MU5R@1224|Proteobacteria,42ZJ1@68525|delta/epsilon subdivisions,2MUPH@213481|Bdellovibrionales,2WV0T@28221|Deltaproteobacteria	213481|Bdellovibrionales	C	Transketolase, pyrimidine binding domain	-	-	1.2.4.4	ko:K11381	ko00280,ko00640,ko01100,ko01110,ko01130,map00280,map00640,map01100,map01110,map01130	M00036	R07599,R07600,R07601,R07602,R07603,R07604,R10996,R10997	RC00027,RC00627,RC02743,RC02883,RC02949,RC02953	br01601,ko00000,ko00001,ko00002,ko01000	-	-	-	E1_dh,Transket_pyr,Transketolase_C
DYD3_k127_4112658_4	756272.Plabr_4327	1.335e-141	463.0	COG0160@1|root,COG0160@2|Bacteria,2IX55@203682|Planctomycetes	203682|Planctomycetes	H	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family	-	-	2.6.1.11,2.6.1.17	ko:K00821	ko00220,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00220,map00300,map01100,map01110,map01120,map01130,map01210,map01230	M00016,M00028,M00845	R02283,R04475	RC00006,RC00062	ko00000,ko00001,ko00002,ko01000,ko01007	-	-	-	Aminotran_3
DYD3_k127_4112658_11	756272.Plabr_4326	6.855e-92	313.0	COG3138@1|root,COG3138@2|Bacteria,2IZXE@203682|Planctomycetes	203682|Planctomycetes	E	COG3138 Arginine ornithine N-succinyltransferase beta subunit	-	-	2.3.1.109	ko:K00673	ko00330,ko01100,map00330,map01100	-	R00832	RC00004,RC00064	ko00000,ko00001,ko01000	-	-	-	AstA
DYD3_k127_4112658_29	264462.Bd2527	1.089e-26	115.0	COG2353@1|root,COG2353@2|Bacteria,1PBC0@1224|Proteobacteria,43332@68525|delta/epsilon subdivisions,2MU9I@213481|Bdellovibrionales,2WX6Z@28221|Deltaproteobacteria	213481|Bdellovibrionales	S	YceI-like domain	-	-	-	-	-	-	-	-	-	-	-	-	YceI
DYD3_k127_4112658_36	656519.Halsa_1055	2.885e-15	81.0	COG2204@1|root,COG2204@2|Bacteria,1V6R9@1239|Firmicutes,24IX3@186801|Clostridia,3WBDM@53433|Halanaerobiales	186801|Clostridia	T	PFAM response regulator receiver	-	-	-	-	-	-	-	-	-	-	-	-	Response_reg,TPR_2,TPR_8
DYD3_k127_4112658_8	765869.BDW_08955	2.813e-103	342.0	COG5383@1|root,COG5383@2|Bacteria,1MWTV@1224|Proteobacteria,42UDM@68525|delta/epsilon subdivisions,2MSXX@213481|Bdellovibrionales,2WQI9@28221|Deltaproteobacteria	213481|Bdellovibrionales	S	DUF1338	-	-	-	-	-	-	-	-	-	-	-	-	DUF1338
DYD3_k127_4112658_2	862908.BMS_3370	3.708e-180	577.0	COG1012@1|root,COG1012@2|Bacteria,1MV2I@1224|Proteobacteria,42R7M@68525|delta/epsilon subdivisions,2MSMV@213481|Bdellovibrionales,2WMUH@28221|Deltaproteobacteria	213481|Bdellovibrionales	C	Succinylglutamic semialdehyde dehydrogenase	astD	-	1.2.1.71	ko:K06447	ko00330,ko01100,map00330,map01100	-	R05049	RC00080	ko00000,ko00001,ko01000	-	-	-	Aldedh
DYD3_k127_4112658_9	926549.KI421517_gene2001	7.239e-100	339.0	COG0477@1|root,COG2814@2|Bacteria,4NESW@976|Bacteroidetes,47JIH@768503|Cytophagia	976|Bacteroidetes	EGP	PFAM Major Facilitator Superfamily	-	-	-	-	-	-	-	-	-	-	-	-	MFS_1,Sugar_tr
DYD3_k127_4112658_19	112098.XP_008620823.1	3.188e-67	239.0	COG2962@1|root,2SNKR@2759|Eukaryota	2759|Eukaryota	S	EamA-like transporter family	-	-	-	-	-	-	-	-	-	-	-	-	EamA
DYD3_k127_4112658_12	862908.BMS_0499	1.117e-88	303.0	COG0583@1|root,COG0583@2|Bacteria,1MVA1@1224|Proteobacteria,42QWY@68525|delta/epsilon subdivisions,2MSQP@213481|Bdellovibrionales,2WMZD@28221|Deltaproteobacteria	213481|Bdellovibrionales	K	LysR substrate binding domain	oxyR	-	-	ko:K04761	ko02026,map02026	-	-	-	ko00000,ko00001,ko03000	-	-	-	HTH_1,LysR_substrate
DYD3_k127_4112658_33	1121374.KB891588_gene3305	2.101e-17	88.0	COG3238@1|root,COG3238@2|Bacteria,1N6ZC@1224|Proteobacteria,1SEP3@1236|Gammaproteobacteria	1236|Gammaproteobacteria	S	Putative inner membrane exporter, YdcZ	-	-	-	ko:K09936	ko02024,map02024	-	-	-	ko00000,ko00001,ko02000	2.A.7.21	-	-	DMT_YdcZ
DYD3_k127_4112658_25	1335757.SPICUR_03565	1.222e-34	146.0	COG3842@1|root,COG3842@2|Bacteria,1MU3I@1224|Proteobacteria,1RNPX@1236|Gammaproteobacteria,1WWRC@135613|Chromatiales	135613|Chromatiales	E	Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system	potA	-	3.6.3.20,3.6.3.31	ko:K05816,ko:K11072,ko:K11076	ko02010,map02010	M00198,M00299,M00300	-	-	ko00000,ko00001,ko00002,ko01000,ko02000	3.A.1.1.3,3.A.1.11.1,3.A.1.11.2	-	-	ABC_tran,TOBE_2
DYD3_k127_4112658_23	1184267.A11Q_1018	5.417e-48	190.0	COG1502@1|root,COG1502@2|Bacteria,1MUDJ@1224|Proteobacteria,42M77@68525|delta/epsilon subdivisions,2MTBA@213481|Bdellovibrionales,2WM41@28221|Deltaproteobacteria	213481|Bdellovibrionales	I	Phospholipase D. Active site motifs.	-	-	-	ko:K06132	ko00564,ko01100,map00564,map01100	-	R11062	RC00017	ko00000,ko00001,ko01000	-	-	-	PLDc_2
DYD3_k127_4112658_37	404589.Anae109_3838	4.452e-14	84.0	COG1409@1|root,COG1409@2|Bacteria,1NS3S@1224|Proteobacteria,43AFC@68525|delta/epsilon subdivisions,2X64J@28221|Deltaproteobacteria,2Z0UN@29|Myxococcales	28221|Deltaproteobacteria	G	Purple acid Phosphatase, N-terminal domain	-	-	-	-	-	-	-	-	-	-	-	-	Metallophos,Pur_ac_phosph_N
DYD3_k127_4112658_5	1201290.M902_1023	5.973e-135	435.0	COG0320@1|root,COG0320@2|Bacteria,1MVRD@1224|Proteobacteria,42P2E@68525|delta/epsilon subdivisions,2MTIH@213481|Bdellovibrionales,2WIJQ@28221|Deltaproteobacteria	213481|Bdellovibrionales	H	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives	lipA	GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006464,GO:0006629,GO:0006631,GO:0006633,GO:0006732,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009106,GO:0009107,GO:0009108,GO:0009249,GO:0009987,GO:0010467,GO:0016053,GO:0016740,GO:0016782,GO:0016783,GO:0016992,GO:0018065,GO:0018130,GO:0018193,GO:0018205,GO:0019538,GO:0019752,GO:0032787,GO:0036211,GO:0043170,GO:0043412,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044267,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0046483,GO:0051186,GO:0051188,GO:0051604,GO:0070283,GO:0071704,GO:0072330,GO:1901360,GO:1901362,GO:1901564,GO:1901576	2.8.1.8	ko:K03644	ko00785,ko01100,map00785,map01100	-	R07767,R07768	RC01978	ko00000,ko00001,ko01000	-	-	-	LIAS_N,Radical_SAM
DYD3_k127_4112658_24	1201288.M900_0798	3.095e-46	175.0	COG0321@1|root,COG0321@2|Bacteria,1MU6A@1224|Proteobacteria,42RIC@68525|delta/epsilon subdivisions,2MTAV@213481|Bdellovibrionales,2WNRX@28221|Deltaproteobacteria	213481|Bdellovibrionales	H	Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate-dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate	lipB	GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009249,GO:0009987,GO:0010467,GO:0018065,GO:0018193,GO:0018205,GO:0019538,GO:0036211,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0051604,GO:0071704,GO:1901564	2.3.1.181	ko:K03801	ko00785,ko01100,map00785,map01100	-	R07766,R07769	RC00039,RC00992,RC02867	ko00000,ko00001,ko01000	-	-	-	BPL_LplA_LipB
DYD3_k127_4112658_6	862908.BMS_3158	6.794e-124	405.0	COG0082@1|root,COG0082@2|Bacteria,1MU98@1224|Proteobacteria,42MF9@68525|delta/epsilon subdivisions,2MSM4@213481|Bdellovibrionales,2WJ57@28221|Deltaproteobacteria	213481|Bdellovibrionales	E	Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system	aroC	-	4.2.3.5	ko:K01736	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	M00022	R01714	RC00586	ko00000,ko00001,ko00002,ko01000	-	-	-	Chorismate_synt
DYD3_k127_4112658_10	1089439.KB902275_gene1706	2.966e-98	346.0	COG1368@1|root,COG1368@2|Bacteria,1MVCM@1224|Proteobacteria,1RYKY@1236|Gammaproteobacteria,46304@72273|Thiotrichales	72273|Thiotrichales	M	Sulfatase	-	-	-	-	-	-	-	-	-	-	-	-	Sulfatase
DYD3_k127_4112658_7	862908.BMS_3065	2.07e-122	402.0	COG2805@1|root,COG2805@2|Bacteria,1MU3J@1224|Proteobacteria,42M7F@68525|delta/epsilon subdivisions,2MSP9@213481|Bdellovibrionales,2WIMF@28221|Deltaproteobacteria	213481|Bdellovibrionales	NU	twitching motility protein	-	-	-	ko:K02669	-	-	-	-	ko00000,ko02035,ko02044	3.A.15.2	-	-	T2SSE
DYD3_k127_4112658_18	227377.CBU_0096	2.905e-67	243.0	COG1502@1|root,COG1502@2|Bacteria,1MWUW@1224|Proteobacteria,1RNEC@1236|Gammaproteobacteria	1236|Gammaproteobacteria	I	Catalyzes the phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol	clsB	GO:0003674,GO:0003824,GO:0004620,GO:0004630,GO:0005575,GO:0006629,GO:0006644,GO:0006650,GO:0006655,GO:0006793,GO:0006796,GO:0008081,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0008808,GO:0009058,GO:0009987,GO:0016020,GO:0016298,GO:0016740,GO:0016772,GO:0016780,GO:0016787,GO:0016788,GO:0019637,GO:0030572,GO:0032048,GO:0032049,GO:0042578,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0045017,GO:0046471,GO:0046474,GO:0046486,GO:0071704,GO:0090407,GO:1901576	-	ko:K06131	ko00564,ko01100,map00564,map01100	-	R07390	RC00017	ko00000,ko00001,ko01000	-	-	iECED1_1282.ECED1_0754	PLDc_2
DYD3_k127_4112658_20	261292.Nit79A3_1925	3.156e-64	229.0	COG3568@1|root,COG3568@2|Bacteria,1MVN7@1224|Proteobacteria,2VJYW@28216|Betaproteobacteria,372S8@32003|Nitrosomonadales	28216|Betaproteobacteria	L	PFAM Endonuclease exonuclease phosphatase	-	-	-	-	-	-	-	-	-	-	-	-	Exo_endo_phos
DYD3_k127_4112658_30	743720.Psefu_3405	2.138e-26	115.0	COG0783@1|root,COG0783@2|Bacteria	2|Bacteria	P	Belongs to the Dps family	-	-	-	ko:K04047	-	-	-	-	ko00000,ko03036	-	-	-	Ferritin
DYD3_k127_4112658_26	378806.STAUR_1640	5.068e-32	133.0	2BQU5@1|root,32JQX@2|Bacteria,1Q2FD@1224|Proteobacteria,43F3V@68525|delta/epsilon subdivisions,2X3BD@28221|Deltaproteobacteria,2YV8I@29|Myxococcales	28221|Deltaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_4112658_27	765869.BDW_06100	5.352e-32	132.0	COG2755@1|root,COG2755@2|Bacteria,1NTK7@1224|Proteobacteria	1224|Proteobacteria	E	lipolytic protein G-D-S-L family	wssF	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_4112658_15	1353529.M899_0755	8.912e-79	268.0	COG3340@1|root,COG3340@2|Bacteria,1N554@1224|Proteobacteria,43B7T@68525|delta/epsilon subdivisions	1224|Proteobacteria	E	Peptidase family S51	-	-	3.4.13.21	ko:K05995	-	-	-	-	ko00000,ko01000,ko01002	-	-	-	Peptidase_S51
DYD3_k127_4112658_1	1353529.M899_0757	5.828e-219	694.0	COG0397@1|root,COG0397@2|Bacteria,1NRW9@1224|Proteobacteria,42Y88@68525|delta/epsilon subdivisions,2MTGI@213481|Bdellovibrionales,2WTM9@28221|Deltaproteobacteria	213481|Bdellovibrionales	S	Uncharacterized ACR, YdiU/UPF0061 family	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_4112658_16	862908.BMS_0725	6.213e-74	258.0	COG1073@1|root,COG1073@2|Bacteria,1RFAF@1224|Proteobacteria,43AJV@68525|delta/epsilon subdivisions,2MUS4@213481|Bdellovibrionales,2X601@28221|Deltaproteobacteria	213481|Bdellovibrionales	S	Alpha/beta hydrolase family	-	-	-	ko:K06889	-	-	-	-	ko00000	-	-	-	Hydrolase_4
DYD3_k127_4112658_21	865937.Gilli_1101	3.536e-53	195.0	COG2173@1|root,COG2173@2|Bacteria,4NE2K@976|Bacteroidetes,1HYZ1@117743|Flavobacteriia,2P7B3@244698|Gillisia	976|Bacteroidetes	M	D-ala-D-ala dipeptidase	vanX	-	3.4.13.22	ko:K08641	ko01502,ko02020,map01502,map02020	M00651	-	-	ko00000,ko00001,ko00002,ko01000,ko01002,ko01011,ko01504	-	-	-	Peptidase_M15
DYD3_k127_4112658_14	862908.BMS_0429	3.84e-81	293.0	28J7E@1|root,2Z92U@2|Bacteria,1NAE1@1224|Proteobacteria,42P08@68525|delta/epsilon subdivisions,2MSYH@213481|Bdellovibrionales,2WJXV@28221|Deltaproteobacteria	213481|Bdellovibrionales	S	Domain of unknown function (DUF4105)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4105
DYD3_k127_4112658_32	765869.BDW_07065	1.763e-23	105.0	2DMP9@1|root,32SV1@2|Bacteria,1N17Y@1224|Proteobacteria,42TQF@68525|delta/epsilon subdivisions,2MUCE@213481|Bdellovibrionales,2WQHJ@28221|Deltaproteobacteria	213481|Bdellovibrionales	S	Protein of unknown function (DUF3015)	-	-	-	-	-	-	-	-	-	-	-	-	DUF3015
DYD3_k127_4112658_31	1201288.M900_1282	4.175e-26	116.0	COG0400@1|root,COG0400@2|Bacteria	2|Bacteria	S	palmitoyl-(protein) hydrolase activity	-	-	3.1.3.18	ko:K01091	ko00630,ko01100,ko01110,ko01130,map00630,map01100,map01110,map01130	-	R01334	RC00017	ko00000,ko00001,ko01000	-	-	-	-
DYD3_k127_4112658_39	1034347.CAHJ01000037_gene4365	5.908e-09	64.0	COG0494@1|root,COG0494@2|Bacteria,1V6F5@1239|Firmicutes,4HII9@91061|Bacilli,1ZFIW@1386|Bacillus	91061|Bacilli	L	Belongs to the Nudix hydrolase family	nudF	-	3.6.1.13	ko:K01515	ko00230,map00230	-	R01054	RC00002	ko00000,ko00001,ko01000	-	-	iSB619.SA_RS07540,iYO844.BSU23610	NUDIX
DYD3_k127_4112658_38	32049.SYNPCC7002_A2662	1.744e-10	63.0	COG2906@1|root,COG2906@2|Bacteria,1GPJW@1117|Cyanobacteria,1H3EA@1129|Synechococcus	1117|Cyanobacteria	P	BFD-like [2Fe-2S] binding domain	-	-	-	ko:K02192	-	-	-	-	ko00000	-	-	-	Fer2_BFD
DYD3_k127_4112658_17	1353529.M899_2061	1.234e-73	250.0	COG2193@1|root,COG2193@2|Bacteria,1RCW7@1224|Proteobacteria,42SK2@68525|delta/epsilon subdivisions,2WPB3@28221|Deltaproteobacteria	28221|Deltaproteobacteria	P	Iron-storage protein, whose ferroxidase center binds Fe(2 ) ions, oxidizes them by dioxygen to Fe(3 ), and participates in the subsequent Fe(3 ) oxide mineral core formation within the central cavity of the protein complex	bfr	GO:0006873,GO:0006875,GO:0006879,GO:0006880,GO:0008150,GO:0009987,GO:0019725,GO:0030003,GO:0042592,GO:0046916,GO:0048878,GO:0050801,GO:0051179,GO:0051235,GO:0051238,GO:0051641,GO:0051651,GO:0055065,GO:0055072,GO:0055076,GO:0055080,GO:0055082,GO:0065007,GO:0065008,GO:0097577,GO:0098771	1.16.3.1	ko:K03594	ko00860,map00860	-	R00078	RC02758	ko00000,ko00001,ko01000	-	-	-	Ferritin
DYD3_k127_4112658_22	1313421.JHBV01000043_gene3082	2.434e-50	183.0	COG0432@1|root,COG0432@2|Bacteria,4NNMN@976|Bacteroidetes,1ISBQ@117747|Sphingobacteriia	976|Bacteroidetes	S	PFAM Uncharacterised protein family UPF0047	yjbQ	-	-	-	-	-	-	-	-	-	-	-	UPF0047
DYD3_k127_4112658_13	1353529.M899_3285	7.624e-84	289.0	COG0042@1|root,COG0042@2|Bacteria,1MV5V@1224|Proteobacteria,42N3M@68525|delta/epsilon subdivisions,2MSWR@213481|Bdellovibrionales,2WKM7@28221|Deltaproteobacteria	213481|Bdellovibrionales	H	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines	-	-	-	-	-	-	-	-	-	-	-	-	Dus
DYD3_k127_4112658_3	1004149.AFOE01000018_gene574	3.255e-148	490.0	COG3291@1|root,COG4412@1|root,COG4733@1|root,COG5644@1|root,COG3291@2|Bacteria,COG4412@2|Bacteria,COG4733@2|Bacteria,COG5644@2|Bacteria,4P2UU@976|Bacteroidetes,1HYAX@117743|Flavobacteriia	976|Bacteroidetes	DZ	TIGRFAM Bacterial surface protein 26-residue repeat	-	-	-	-	-	-	-	-	-	-	-	-	CHU_C,Cadherin,DUF285,TIG,TSP_3
DYD3_k127_4112658_42	1201290.M902_0225	3.915e-08	64.0	COG2911@1|root,COG3209@1|root,COG3210@1|root,COG2911@2|Bacteria,COG3209@2|Bacteria,COG3210@2|Bacteria,1NED3@1224|Proteobacteria,42WDX@68525|delta/epsilon subdivisions,2WRDH@28221|Deltaproteobacteria	28221|Deltaproteobacteria	U	cell wall surface anchor family protein	-	-	-	-	-	-	-	-	-	-	-	-	Peptidase_S74
DYD3_k127_4125856_8	1047013.AQSP01000081_gene88	1.123e-37	161.0	COG4206@1|root,COG4206@2|Bacteria,2NP6H@2323|unclassified Bacteria	2|Bacteria	H	TonB dependent receptor	btuB	-	-	ko:K02014,ko:K16092	-	-	-	-	ko00000,ko02000	1.B.14,1.B.14.3	-	-	Plug,TonB_dep_Rec
DYD3_k127_4125856_7	862908.BMS_1170	1.158e-62	239.0	COG1752@1|root,COG1752@2|Bacteria,1NCAA@1224|Proteobacteria,42ZIY@68525|delta/epsilon subdivisions,2WUVJ@28221|Deltaproteobacteria	28221|Deltaproteobacteria	S	Patatin-like phospholipase	-	-	-	-	-	-	-	-	-	-	-	-	Patatin
DYD3_k127_4125856_16	1158345.JNLL01000001_gene1589	6.615e-17	83.0	COG2337@1|root,COG2337@2|Bacteria	2|Bacteria	T	Toxic component of a toxin-antitoxin (TA) module	mazF	-	-	ko:K07171	-	-	-	-	ko00000,ko01000,ko02048	-	-	-	PemK_toxin
DYD3_k127_4125856_14	1201290.M902_2131	2.371e-27	115.0	COG1544@1|root,COG1544@2|Bacteria	2|Bacteria	J	regulation of translation	hpf	GO:0003674,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006417,GO:0006448,GO:0008150,GO:0009889,GO:0009890,GO:0009892,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010608,GO:0010629,GO:0015935,GO:0016020,GO:0017148,GO:0019222,GO:0022626,GO:0022627,GO:0030312,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032268,GO:0032269,GO:0032991,GO:0034248,GO:0034249,GO:0043021,GO:0043022,GO:0043024,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0044877,GO:0045900,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051246,GO:0051248,GO:0060255,GO:0065007,GO:0071944,GO:0080090,GO:1990904,GO:2000112,GO:2000113	-	ko:K05808	-	-	-	-	ko00000,ko03009	-	-	-	Ribosom_S30AE_C,Ribosomal_S30AE
DYD3_k127_4125856_1	1353529.M899_2682	1.385e-175	563.0	COG1508@1|root,COG1508@2|Bacteria,1MW4V@1224|Proteobacteria,42M3C@68525|delta/epsilon subdivisions,2MSR3@213481|Bdellovibrionales,2WJ21@28221|Deltaproteobacteria	213481|Bdellovibrionales	K	Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released	rpoN	-	-	ko:K03092	ko02020,ko05111,map02020,map05111	-	-	-	ko00000,ko00001,ko03021	-	-	-	Sigma54_AID,Sigma54_CBD,Sigma54_DBD
DYD3_k127_4125856_4	1201290.M902_2129	3.703e-114	372.0	COG1137@1|root,COG1137@2|Bacteria,1MU8M@1224|Proteobacteria,42M4J@68525|delta/epsilon subdivisions,2MSMF@213481|Bdellovibrionales,2WJM8@28221|Deltaproteobacteria	213481|Bdellovibrionales	S	PFAM ABC transporter	lptB	-	-	ko:K06861	ko02010,map02010	M00320	-	-	ko00000,ko00001,ko00002,ko01000,ko02000	1.B.42.1	-	-	ABC_tran,BCA_ABC_TP_C
DYD3_k127_4125856_0	862908.BMS_2677	0.0	1030.0	COG0249@1|root,COG0249@2|Bacteria,1MUGX@1224|Proteobacteria,42MRR@68525|delta/epsilon subdivisions,2MSNK@213481|Bdellovibrionales,2WIQ7@28221|Deltaproteobacteria	213481|Bdellovibrionales	L	that it carries out the mismatch recognition step. This protein has a weak ATPase activity	mutS	GO:0003674,GO:0003676,GO:0003677,GO:0003684,GO:0003690,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008094,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0030983,GO:0032300,GO:0032991,GO:0033554,GO:0034641,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1990391	-	ko:K03555	ko03430,map03430	-	-	-	ko00000,ko00001,ko03400	-	-	-	MutS_I,MutS_II,MutS_III,MutS_IV,MutS_V
DYD3_k127_4125856_12	1353529.M899_2129	1.069e-31	139.0	COG2206@1|root,COG2206@2|Bacteria	2|Bacteria	T	PFAM metal-dependent phosphohydrolase, HD sub domain	-	-	-	-	-	-	-	-	-	-	-	-	HD,HD_5,Hpt
DYD3_k127_4125856_11	1201288.M900_A0417	1.727e-34	148.0	COG2206@1|root,COG2206@2|Bacteria	2|Bacteria	T	PFAM metal-dependent phosphohydrolase, HD sub domain	-	-	-	-	-	-	-	-	-	-	-	-	HD,HD_5,Hpt
DYD3_k127_4125856_3	1391646.AVSU01000029_gene2645	3.755e-156	512.0	COG0173@1|root,COG0173@2|Bacteria,1TPCN@1239|Firmicutes,247Z3@186801|Clostridia,25QPR@186804|Peptostreptococcaceae	186801|Clostridia	J	Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp)	aspS	-	6.1.1.12	ko:K01876	ko00970,map00970	M00359,M00360	R05577	RC00055,RC00523	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029	-	-	-	GAD,tRNA-synt_2,tRNA-synt_2d,tRNA_anti-codon
DYD3_k127_4125856_13	862908.BMS_2683	4.128e-28	120.0	COG1430@1|root,COG1430@2|Bacteria,1MZBJ@1224|Proteobacteria,42VH9@68525|delta/epsilon subdivisions,2MTFY@213481|Bdellovibrionales,2WT3R@28221|Deltaproteobacteria	213481|Bdellovibrionales	S	Uncharacterized ACR, COG1430	-	-	-	ko:K09005	-	-	-	-	ko00000	-	-	-	DUF192
DYD3_k127_4125856_15	862908.BMS_2683	9.012e-18	90.0	COG1430@1|root,COG1430@2|Bacteria,1MZBJ@1224|Proteobacteria,42VH9@68525|delta/epsilon subdivisions,2MTFY@213481|Bdellovibrionales,2WT3R@28221|Deltaproteobacteria	213481|Bdellovibrionales	S	Uncharacterized ACR, COG1430	-	-	-	ko:K09005	-	-	-	-	ko00000	-	-	-	DUF192
DYD3_k127_4125856_2	1201290.M902_1894	1.376e-162	530.0	COG0513@1|root,COG0513@2|Bacteria,1MU49@1224|Proteobacteria,42MGZ@68525|delta/epsilon subdivisions,2MSMR@213481|Bdellovibrionales,2WIY6@28221|Deltaproteobacteria	213481|Bdellovibrionales	L	Belongs to the DEAD box helicase family	-	-	3.6.4.13	ko:K05592	ko03018,map03018	-	-	-	ko00000,ko00001,ko01000,ko03009,ko03019	-	-	-	DEAD,DbpA,Helicase_C
DYD3_k127_4125856_9	1246445.ANAY01000006_gene3669	8.943e-37	156.0	COG0591@1|root,COG0591@2|Bacteria	2|Bacteria	E	symporter activity	-	-	-	-	-	-	-	-	-	-	-	-	Beta-lactamase,DUF1343,SSF
DYD3_k127_4125856_6	857087.Metme_3259	1.529e-65	246.0	COG2274@1|root,COG2274@2|Bacteria,1MXTI@1224|Proteobacteria,1RQ97@1236|Gammaproteobacteria	1236|Gammaproteobacteria	V	abc transporter atp-binding protein	-	-	-	ko:K02021	-	-	-	-	ko00000,ko02000	3.A.1.106,3.A.1.110,3.A.1.112,3.A.1.113,3.A.1.117,3.A.1.21	-	-	ABC_membrane
DYD3_k127_4125856_5	272624.lpg0225	1.624e-85	295.0	COG0845@1|root,COG0845@2|Bacteria,1PZ6R@1224|Proteobacteria,1RRGC@1236|Gammaproteobacteria,1JD1U@118969|Legionellales	118969|Legionellales	M	RND efflux membrane fusion	-	-	-	-	-	-	-	-	-	-	-	-	Biotin_lipoyl_2,HlyD_3
DYD3_k127_4144316_10	1184267.A11Q_941	1.495e-64	232.0	COG0708@1|root,COG0708@2|Bacteria,1QIB4@1224|Proteobacteria,42ZET@68525|delta/epsilon subdivisions,2MSXV@213481|Bdellovibrionales,2WUSU@28221|Deltaproteobacteria	213481|Bdellovibrionales	L	Endonuclease/Exonuclease/phosphatase family	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_4144316_22	272624.lpg2069	3.172e-06	49.0	COG3385@1|root,COG3385@2|Bacteria,1MXYG@1224|Proteobacteria,1T3NU@1236|Gammaproteobacteria,1JGPG@118969|Legionellales	118969|Legionellales	L	Transposase DDE domain	-	-	-	-	-	-	-	-	-	-	-	-	Dimer_Tnp_Tn5
DYD3_k127_4144316_11	862908.BMS_2436	5.168e-54	198.0	COG3917@1|root,COG3917@2|Bacteria,1RJFB@1224|Proteobacteria,4321E@68525|delta/epsilon subdivisions,2WWXC@28221|Deltaproteobacteria	28221|Deltaproteobacteria	G	DSBA-like thioredoxin domain	-	-	-	-	-	-	-	-	-	-	-	-	DSBA
DYD3_k127_4144316_14	1201290.M902_0965	3.587e-30	125.0	2C5K6@1|root,34306@2|Bacteria,1NX7I@1224|Proteobacteria	1224|Proteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	DUF4430
DYD3_k127_4144316_2	1353529.M899_0739	8.222e-226	711.0	COG1816@1|root,COG1816@2|Bacteria,1R7EK@1224|Proteobacteria,42MHV@68525|delta/epsilon subdivisions,2MSQX@213481|Bdellovibrionales,2WMI4@28221|Deltaproteobacteria	213481|Bdellovibrionales	F	Adenosine/AMP deaminase	-	-	-	-	-	-	-	-	-	-	-	-	A_deaminase
DYD3_k127_4144316_17	771875.Ferpe_0701	1.316e-25	110.0	COG1970@1|root,COG1970@2|Bacteria,2GEE5@200918|Thermotogae	2|Bacteria	M	Large-conductance mechanosensitive channel, MscL	mscL	GO:0003674,GO:0005215,GO:0005575,GO:0006810,GO:0006811,GO:0006884,GO:0008150,GO:0008361,GO:0008381,GO:0009987,GO:0009992,GO:0015267,GO:0016020,GO:0016021,GO:0016043,GO:0019725,GO:0022803,GO:0022836,GO:0022857,GO:0030104,GO:0031224,GO:0032535,GO:0042592,GO:0044425,GO:0048878,GO:0051179,GO:0051234,GO:0055082,GO:0055085,GO:0065007,GO:0065008,GO:0071840,GO:0090066	-	ko:K03282	-	-	-	-	ko00000,ko02000	1.A.22.1	-	-	MscL
DYD3_k127_4144316_8	264462.Bd3823	1.119e-72	267.0	COG3228@1|root,COG3228@2|Bacteria,1R9QQ@1224|Proteobacteria,42Z4D@68525|delta/epsilon subdivisions,2MTT9@213481|Bdellovibrionales,2WTTI@28221|Deltaproteobacteria	213481|Bdellovibrionales	S	Domain of unknown function (DUF4105)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4105
DYD3_k127_4144316_15	771875.Ferpe_0701	2.969e-27	114.0	COG1970@1|root,COG1970@2|Bacteria,2GEE5@200918|Thermotogae	2|Bacteria	M	Large-conductance mechanosensitive channel, MscL	mscL	GO:0003674,GO:0005215,GO:0005575,GO:0006810,GO:0006811,GO:0006884,GO:0008150,GO:0008361,GO:0008381,GO:0009987,GO:0009992,GO:0015267,GO:0016020,GO:0016021,GO:0016043,GO:0019725,GO:0022803,GO:0022836,GO:0022857,GO:0030104,GO:0031224,GO:0032535,GO:0042592,GO:0044425,GO:0048878,GO:0051179,GO:0051234,GO:0055082,GO:0055085,GO:0065007,GO:0065008,GO:0071840,GO:0090066	-	ko:K03282	-	-	-	-	ko00000,ko02000	1.A.22.1	-	-	MscL
DYD3_k127_4144316_5	1238182.C882_0410	3.186e-97	327.0	COG1703@1|root,COG1703@2|Bacteria,1MVI0@1224|Proteobacteria,2TS96@28211|Alphaproteobacteria,2JP84@204441|Rhodospirillales	204441|Rhodospirillales	E	periplasmic protein kinase ArgK and related GTPases of G3E family	argK	-	-	ko:K07588	-	-	-	-	ko00000,ko01000	-	-	-	ArgK
DYD3_k127_4144316_1	1123355.JHYO01000021_gene180	0.0	1021.0	COG2185@1|root,COG2185@2|Bacteria,1QU3N@1224|Proteobacteria,2TVY1@28211|Alphaproteobacteria,371JA@31993|Methylocystaceae	28211|Alphaproteobacteria	I	Methylmalonyl-CoA mutase	-	-	5.4.99.2	ko:K01847	ko00280,ko00630,ko00640,ko00720,ko01100,ko01120,ko01200,map00280,map00630,map00640,map00720,map01100,map01120,map01200	M00373,M00376,M00741	R00833	RC00395	ko00000,ko00001,ko00002,ko01000	-	-	-	B12-binding,MM_CoA_mutase
DYD3_k127_4144316_16	1267580.AF6_0962	4.728e-27	127.0	COG1884@1|root,COG1884@2|Bacteria,1TSVA@1239|Firmicutes,4HDE1@91061|Bacilli,21WCI@150247|Anoxybacillus	91061|Bacilli	I	Methylmalonyl-CoA mutase	mutA	-	5.4.99.2	ko:K01847	ko00280,ko00630,ko00640,ko00720,ko01100,ko01120,ko01200,map00280,map00630,map00640,map00720,map01100,map01120,map01200	M00373,M00376,M00741	R00833	RC00395	ko00000,ko00001,ko00002,ko01000	-	-	-	MM_CoA_mutase
DYD3_k127_4144316_9	862908.BMS_1012	4.521e-71	257.0	COG2204@1|root,COG2206@1|root,COG2204@2|Bacteria,COG2206@2|Bacteria	2|Bacteria	T	PFAM metal-dependent phosphohydrolase, HD sub domain	cnpD3	-	3.6.1.11,3.6.1.40	ko:K01524,ko:K02282,ko:K07016,ko:K20971	ko00230,ko02025,map00230,map02025	-	R03409	RC00002	ko00000,ko00001,ko01000,ko01001,ko02022,ko02035,ko02044,ko02048	-	-	-	HD,HD_5
DYD3_k127_4144316_7	862908.BMS_2802	2.036e-87	295.0	COG0500@1|root,COG2226@2|Bacteria,1QY1T@1224|Proteobacteria,42YBC@68525|delta/epsilon subdivisions,2MSW8@213481|Bdellovibrionales,2WUEA@28221|Deltaproteobacteria	213481|Bdellovibrionales	Q	methyltransferase	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_4144316_3	862908.BMS_2408	6.788e-181	591.0	COG0793@1|root,COG0793@2|Bacteria,1MU39@1224|Proteobacteria,42NID@68525|delta/epsilon subdivisions,2MSNJ@213481|Bdellovibrionales,2WJ4P@28221|Deltaproteobacteria	213481|Bdellovibrionales	M	Belongs to the peptidase S41A family	prc	-	3.4.21.102	ko:K03797	-	-	-	-	ko00000,ko01000,ko01002	-	-	-	DUF3340,PDZ,Peptidase_S41
DYD3_k127_4144316_6	1201290.M902_1159	2.808e-96	327.0	COG0167@1|root,COG0167@2|Bacteria,1MU7C@1224|Proteobacteria,42M46@68525|delta/epsilon subdivisions,2MT2D@213481|Bdellovibrionales,2WJ7G@28221|Deltaproteobacteria	213481|Bdellovibrionales	F	Catalyzes the conversion of dihydroorotate to orotate	pyrD	GO:0003674,GO:0003824,GO:0004152,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006206,GO:0006207,GO:0006220,GO:0006221,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009112,GO:0009117,GO:0009165,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0016491,GO:0016627,GO:0016635,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019856,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046112,GO:0046390,GO:0046483,GO:0055086,GO:0055114,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576	1.3.1.14,1.3.5.2	ko:K00254,ko:K02823,ko:K17828	ko00240,ko01100,map00240,map01100	M00051	R01868,R01869	RC00051	ko00000,ko00001,ko00002,ko01000	-	-	-	DHO_dh
DYD3_k127_4144316_4	1158146.KB907128_gene1800	5.243e-125	406.0	COG0189@1|root,COG0189@2|Bacteria,1MX62@1224|Proteobacteria,1RM8B@1236|Gammaproteobacteria,1WX7Z@135613|Chromatiales	135613|Chromatiales	HJ	Belongs to the RimK family	rimK	-	-	ko:K05844	-	-	-	-	ko00000,ko01000,ko03009	-	-	-	RimK
DYD3_k127_4144316_12	1297581.H919_08385	4.332e-37	145.0	COG0369@1|root,COG0369@2|Bacteria,1TP5J@1239|Firmicutes,4HCQI@91061|Bacilli	91061|Bacilli	P	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component	cysJ	-	1.8.1.2	ko:K00380	ko00920,ko01100,ko01120,map00920,map01100,map01120	M00176	R00858	RC00065	ko00000,ko00001,ko00002,ko01000	-	-	iYO844.BSU33440	FAD_binding_1,Flavodoxin_1,NAD_binding_1
DYD3_k127_4144316_23	1122130.AUHN01000004_gene1233	5.1e-05	49.0	COG2608@1|root,COG2608@2|Bacteria	2|Bacteria	P	mercury ion transmembrane transporter activity	-	-	-	-	-	-	-	-	-	-	-	-	HMA
DYD3_k127_4144316_19	264462.Bd1800	3.222e-14	78.0	2E6Y4@1|root,331HE@2|Bacteria,1R3NM@1224|Proteobacteria,42XD7@68525|delta/epsilon subdivisions,2MUTM@213481|Bdellovibrionales,2WT3C@28221|Deltaproteobacteria	213481|Bdellovibrionales	S	MerC mercury resistance protein	-	-	-	-	-	-	-	-	-	-	-	-	MerC
DYD3_k127_4144316_13	264198.Reut_A2120	4.274e-31	123.0	COG0254@1|root,COG0254@2|Bacteria,1MZ4D@1224|Proteobacteria,2VU3I@28216|Betaproteobacteria,1K8HB@119060|Burkholderiaceae	28216|Betaproteobacteria	J	Ribosomal protein L31	rpmE2	-	-	ko:K02909	ko03010,map03010	M00178	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_L31
DYD3_k127_4144316_0	1123274.KB899411_gene3176	0.0	1070.0	COG0550@1|root,COG1754@1|root,COG0550@2|Bacteria,COG1754@2|Bacteria,2J5BS@203691|Spirochaetes	203691|Spirochaetes	L	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone	topA	-	5.99.1.2	ko:K03168	-	-	-	-	ko00000,ko01000,ko03032,ko03400	-	-	-	Topoisom_bac,Toprim,Toprim_C_rpt,zf-C4_Topoisom
DYD3_k127_4144316_20	1201290.M902_0745	4.479e-13	70.0	COG1846@1|root,COG1846@2|Bacteria,1NYTK@1224|Proteobacteria,430N0@68525|delta/epsilon subdivisions,2MURM@213481|Bdellovibrionales,2WW1B@28221|Deltaproteobacteria	213481|Bdellovibrionales	K	Domain of unknown function (DUF4423)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4423
DYD3_k127_4168530_8	1038867.AXAY01000010_gene1064	1.721e-29	121.0	COG1215@1|root,COG1215@2|Bacteria,1QTWU@1224|Proteobacteria,2TWRY@28211|Alphaproteobacteria,3K6N2@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	Glycosyltransferase like family 2	-	-	-	ko:K20534	-	-	-	-	ko00000,ko01000,ko01005,ko02000	4.D.2.1.9	GT2	-	Glycos_transf_2
DYD3_k127_4168530_9	862908.BMS_0938	4.71e-20	95.0	2DDU5@1|root,2ZJAM@2|Bacteria,1PAH7@1224|Proteobacteria,432EN@68525|delta/epsilon subdivisions,2MUJ4@213481|Bdellovibrionales,2WY5X@28221|Deltaproteobacteria	213481|Bdellovibrionales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	Stanniocalcin
DYD3_k127_4168530_11	1201288.M900_1210	2.541e-13	80.0	2DX9Z@1|root,34426@2|Bacteria,1NZZS@1224|Proteobacteria	1224|Proteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_4168530_5	1278073.MYSTI_07550	8.117e-46	187.0	COG0642@1|root,COG3614@1|root,COG2205@2|Bacteria,COG3614@2|Bacteria,1NRP8@1224|Proteobacteria,42RDI@68525|delta/epsilon subdivisions,2WU70@28221|Deltaproteobacteria	28221|Deltaproteobacteria	T	CHASE	-	-	-	-	-	-	-	-	-	-	-	-	CHASE,GAF,HATPase_c,HisKA
DYD3_k127_4168530_10	1353529.M899_1107	1.053e-17	87.0	2C0UW@1|root,2ZEIJ@2|Bacteria,1P77U@1224|Proteobacteria,432BX@68525|delta/epsilon subdivisions,2MUJT@213481|Bdellovibrionales,2WYF3@28221|Deltaproteobacteria	213481|Bdellovibrionales	S	by glimmer	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_4168530_2	1470593.BW43_01404	5.938e-104	354.0	COG0477@1|root,COG2814@2|Bacteria,1MX1Q@1224|Proteobacteria,1RYQ3@1236|Gammaproteobacteria	1236|Gammaproteobacteria	EGP	Major Facilitator	-	-	-	-	-	-	-	-	-	-	-	-	MFS_1
DYD3_k127_4168530_3	1500281.JQKZ01000033_gene177	9.598e-74	257.0	COG2021@1|root,COG2021@2|Bacteria,4PMHB@976|Bacteroidetes	976|Bacteroidetes	E	Alpha beta hydrolase	-	-	-	-	-	-	-	-	-	-	-	-	Abhydrolase_1
DYD3_k127_4168530_1	1121864.OMO_01818	4.152e-122	405.0	COG0104@1|root,COG0104@2|Bacteria,1TQ4C@1239|Firmicutes,4H9YT@91061|Bacilli,4B0Q6@81852|Enterococcaceae	91061|Bacilli	F	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP	purA	GO:0003674,GO:0003824,GO:0004019,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006163,GO:0006164,GO:0006167,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044208,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046033,GO:0046040,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576	6.3.4.4	ko:K01939	ko00230,ko00250,ko01100,map00230,map00250,map01100	M00049	R01135	RC00458,RC00459	ko00000,ko00001,ko00002,ko01000	-	-	-	Adenylsucc_synt
DYD3_k127_4168530_0	1353529.M899_3006	3.165e-153	500.0	COG0728@1|root,COG0728@2|Bacteria,1MUH0@1224|Proteobacteria,42M28@68525|delta/epsilon subdivisions,2MT1N@213481|Bdellovibrionales,2WJPF@28221|Deltaproteobacteria	213481|Bdellovibrionales	S	Involved in peptidoglycan biosynthesis. Transports lipid-linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane	murJ	-	-	ko:K03980	-	-	-	-	ko00000,ko01011,ko02000	2.A.66.4	-	-	MVIN
DYD3_k127_4189688_3	33898.JRHJ01000069_gene7008	2.982e-41	155.0	COG2129@1|root,COG2129@2|Bacteria,2GJ72@201174|Actinobacteria	201174|Actinobacteria	S	metallophosphoesterase	-	-	-	-	-	-	-	-	-	-	-	-	Metallophos
DYD3_k127_4189688_4	1242864.D187_001781	3.86e-17	93.0	COG4914@1|root,COG4914@2|Bacteria,1QX3W@1224|Proteobacteria,43BWC@68525|delta/epsilon subdivisions,2X774@28221|Deltaproteobacteria,2YYN5@29|Myxococcales	28221|Deltaproteobacteria	S	Uncharacterised nucleotidyltransferase	-	-	-	-	-	-	-	-	-	-	-	-	DUF2204,NTP_transf_5
DYD3_k127_4189688_1	1033802.SSPSH_000795	6.613e-60	213.0	COG0454@1|root,COG0454@2|Bacteria,1RDBA@1224|Proteobacteria,1S225@1236|Gammaproteobacteria	1236|Gammaproteobacteria	K	COG0454 Histone acetyltransferase HPA2 and related acetyltransferases	-	-	-	-	-	-	-	-	-	-	-	-	Acetyltransf_1
DYD3_k127_4189688_2	1396418.BATQ01000099_gene5575	8.236e-42	165.0	COG0388@1|root,COG0388@2|Bacteria,46ZGG@74201|Verrucomicrobia,2IUQ5@203494|Verrucomicrobiae	203494|Verrucomicrobiae	S	Carbon-nitrogen hydrolase	-	-	-	-	-	-	-	-	-	-	-	-	Acetyltransf_1,CN_hydrolase
DYD3_k127_4189688_0	1122947.FR7_2825	4.661e-64	225.0	COG1272@1|root,COG1272@2|Bacteria,1TSFK@1239|Firmicutes,4H41C@909932|Negativicutes	909932|Negativicutes	S	channel protein, hemolysin III family	yqfA	-	-	ko:K11068	-	-	-	-	ko00000,ko02042	-	-	-	HlyIII
DYD3_k127_4202190_1	1134474.O59_000934	1.378e-106	356.0	COG3509@1|root,COG3509@2|Bacteria,1N6M6@1224|Proteobacteria,1S6C7@1236|Gammaproteobacteria	1236|Gammaproteobacteria	Q	Esterase PHB depolymerase	lpqC	-	-	ko:K03932	-	-	-	-	ko00000	-	CE1	-	Abhydrolase_2,Esterase_phd
DYD3_k127_4202190_3	1041504.RATSFB_0748	2.674e-06	58.0	COG0265@1|root,COG0265@2|Bacteria,1TRM8@1239|Firmicutes,247M5@186801|Clostridia,36DM2@31979|Clostridiaceae	186801|Clostridia	O	PDZ DHR GLGF domain protein	degQ	-	3.4.21.107	ko:K04771	ko01503,ko02020,map01503,map02020	M00728	-	-	ko00000,ko00001,ko00002,ko01000,ko01002,ko03110	-	-	-	PDZ_2,Trypsin_2
DYD3_k127_4202190_2	378806.STAUR_0330	2.564e-42	161.0	COG1309@1|root,COG1309@2|Bacteria,1NIKJ@1224|Proteobacteria	1224|Proteobacteria	K	COG1309 Transcriptional regulator	-	-	-	ko:K03577	-	M00647	-	-	ko00000,ko00002,ko03000	-	-	-	TetR_N
DYD3_k127_4202190_0	1577887.JSYG01000049_gene3025	1.075e-122	404.0	COG2220@1|root,COG2220@2|Bacteria,1MV20@1224|Proteobacteria,1RN4Z@1236|Gammaproteobacteria,2JCTV@204037|Dickeya	1236|Gammaproteobacteria	S	Beta-lactamase superfamily domain	-	-	-	-	-	-	-	-	-	-	-	-	Lactamase_B_2
DYD3_k127_4205175_2	1476973.JMMB01000007_gene793	5.811e-44	164.0	COG0634@1|root,COG0634@2|Bacteria,1V1C9@1239|Firmicutes,24FR4@186801|Clostridia,25RBZ@186804|Peptostreptococcaceae	186801|Clostridia	F	Belongs to the purine pyrimidine phosphoribosyltransferase family	hpt	-	2.4.2.8	ko:K00760	ko00230,ko00983,ko01100,ko01110,map00230,map00983,map01100,map01110	-	R00190,R01132,R01229,R02142,R08237,R08238,R08245	RC00063,RC00122	ko00000,ko00001,ko01000	-	-	-	Pribosyltran
DYD3_k127_4205175_0	1353529.M899_1106	1.563e-88	300.0	COG0035@1|root,COG0035@2|Bacteria,1RBD6@1224|Proteobacteria,42R1E@68525|delta/epsilon subdivisions,2MTMR@213481|Bdellovibrionales,2WN3Q@28221|Deltaproteobacteria	213481|Bdellovibrionales	F	Uracil phosphoribosyltransferase	-	-	-	-	-	-	-	-	-	-	-	-	UPRTase
DYD3_k127_4205175_1	1353529.M899_1108	6.784e-72	249.0	COG1435@1|root,COG1435@2|Bacteria,1PY2K@1224|Proteobacteria,42RJI@68525|delta/epsilon subdivisions,2MSZ9@213481|Bdellovibrionales,2WNKR@28221|Deltaproteobacteria	213481|Bdellovibrionales	F	Thymidine kinase	tdk	-	2.7.1.21	ko:K00857	ko00240,ko00983,ko01100,map00240,map00983,map01100	-	R01567,R02099,R08233	RC00002,RC00017	ko00000,ko00001,ko01000	-	-	-	TK
DYD3_k127_4218605_2	862908.BMS_3021	1.064e-59	211.0	COG2234@1|root,COG2234@2|Bacteria,1MXJC@1224|Proteobacteria,42RKA@68525|delta/epsilon subdivisions,2MSY3@213481|Bdellovibrionales,2WUCM@28221|Deltaproteobacteria	213481|Bdellovibrionales	S	Peptidase family M28	-	-	3.4.11.10	ko:K05994	-	-	-	-	ko00000,ko01000,ko01002	-	-	-	Peptidase_M28
DYD3_k127_4218605_0	1353529.M899_3134	7.805e-306	963.0	COG4581@1|root,COG4581@2|Bacteria,1MVD6@1224|Proteobacteria,42PR3@68525|delta/epsilon subdivisions,2X5JT@28221|Deltaproteobacteria	28221|Deltaproteobacteria	L	helicase superfamily c-terminal domain	mgpS	-	3.6.4.13	ko:K17675	-	-	-	-	ko00000,ko01000,ko03029	-	-	-	Helicase_C
DYD3_k127_4218605_1	1201288.M900_0553	5.832e-81	279.0	COG2833@1|root,COG2833@2|Bacteria,1MW0V@1224|Proteobacteria,42KZ6@68525|delta/epsilon subdivisions,2MTDK@213481|Bdellovibrionales,2WVSN@28221|Deltaproteobacteria	213481|Bdellovibrionales	F	Protein of unknown function (DUF455)	-	-	-	-	-	-	-	-	-	-	-	-	DUF455
DYD3_k127_4226785_2	55529.EKX45608	7.449e-63	230.0	COG0626@1|root,KOG0053@2759|Eukaryota	2759|Eukaryota	E	cystathionine gamma-synthase activity	-	-	2.5.1.48,4.4.1.11	ko:K01739,ko:K01761	ko00270,ko00450,ko00920,ko01100,ko01110,ko01130,ko01230,map00270,map00450,map00920,map01100,map01110,map01130,map01230	M00017	R00654,R00999,R01288,R02508,R03217,R03260,R04770,R04944,R04945,R04946	RC00020,RC00056,RC00069,RC00196,RC00348,RC00420,RC01209,RC01210,RC02848,RC02866	ko00000,ko00001,ko00002,ko01000	-	-	-	Cys_Met_Meta_PP
DYD3_k127_4226785_6	1122179.KB890416_gene2683	8.188e-15	78.0	COG2940@1|root,COG2940@2|Bacteria	2|Bacteria	K	SET domain	CP_0991	-	-	ko:K07117	-	-	-	-	ko00000	-	-	-	SET
DYD3_k127_4226785_0	1316936.K678_03537	2.693e-67	236.0	COG3884@1|root,COG3884@2|Bacteria,1MYMU@1224|Proteobacteria,2VGXA@28211|Alphaproteobacteria,2JUMF@204441|Rhodospirillales	204441|Rhodospirillales	I	Acyl-ACP thioesterase	-	-	-	-	-	-	-	-	-	-	-	-	Acyl-ACP_TE
DYD3_k127_4226785_5	1162668.LFE_0086	1.727e-24	111.0	COG0745@1|root,COG0745@2|Bacteria,3J0JU@40117|Nitrospirae	40117|Nitrospirae	K	Transcriptional regulatory protein, C terminal	-	-	-	ko:K07664	ko02020,map02020	M00450,M00645,M00646,M00648	-	-	ko00000,ko00001,ko00002,ko02022	-	-	-	Response_reg,Trans_reg_C
DYD3_k127_4226785_4	264462.Bd1657	4.589e-42	171.0	COG4191@1|root,COG4191@2|Bacteria,1RCM9@1224|Proteobacteria,42MC4@68525|delta/epsilon subdivisions,2MSXW@213481|Bdellovibrionales,2WIZU@28221|Deltaproteobacteria	213481|Bdellovibrionales	T	Histidine kinase A domain protein	-	-	-	-	-	-	-	-	-	-	-	-	ABC_sub_bind,HATPase_c,HisKA,PAS_3,PAS_4,PAS_9,Response_reg
DYD3_k127_4226785_1	1237149.C900_02536	1.005e-63	231.0	COG0745@1|root,COG0745@2|Bacteria,4NIQC@976|Bacteroidetes,47PG7@768503|Cytophagia	976|Bacteroidetes	K	COGs COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain	-	-	-	ko:K07667	ko02020,ko02024,map02020,map02024	M00454	-	-	ko00000,ko00001,ko00002,ko02022	-	-	-	Response_reg,Trans_reg_C
DYD3_k127_4226785_3	84531.JMTZ01000010_gene3149	3.766e-46	170.0	COG0752@1|root,COG0752@2|Bacteria,1MVCJ@1224|Proteobacteria,1RMYI@1236|Gammaproteobacteria,1X31P@135614|Xanthomonadales	135614|Xanthomonadales	J	glycyl-tRNA synthetase alpha subunit	glyQ	-	6.1.1.14	ko:K01878	ko00970,map00970	M00360	R03654	RC00055,RC00523	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	-	-	-	tRNA-synt_2e
DYD3_k127_4277964_5	1201288.M900_0470	5.209e-50	179.0	COG1536@1|root,COG1536@2|Bacteria,1MV9X@1224|Proteobacteria,42MS3@68525|delta/epsilon subdivisions,2MSSF@213481|Bdellovibrionales,2WMCR@28221|Deltaproteobacteria	213481|Bdellovibrionales	N	flagellar motor switch protein FliG	fliG	-	-	ko:K02410	ko02030,ko02040,map02030,map02040	-	-	-	ko00000,ko00001,ko02035	-	-	-	FliG_C,FliG_M,FliG_N
DYD3_k127_4277964_6	1353529.M899_1276	2.446e-46	177.0	COG1317@1|root,COG1317@2|Bacteria,1Q5YU@1224|Proteobacteria,43A9H@68525|delta/epsilon subdivisions,2MTEM@213481|Bdellovibrionales,2X2H0@28221|Deltaproteobacteria	213481|Bdellovibrionales	N	Flagellar assembly protein FliH	fliH	-	-	ko:K02411	ko02040,map02040	-	-	-	ko00000,ko00001,ko02035,ko02044	3.A.6.2	-	-	FliH
DYD3_k127_4277964_0	1353529.M899_1275	4.474e-211	663.0	COG1157@1|root,COG1157@2|Bacteria,1MUH6@1224|Proteobacteria,42M0K@68525|delta/epsilon subdivisions,2MSQ7@213481|Bdellovibrionales,2WISR@28221|Deltaproteobacteria	213481|Bdellovibrionales	NU	PFAM H transporting two-sector ATPase alpha beta subunit central region	fliI	-	3.6.3.14	ko:K02412	ko02040,map02040	-	-	-	ko00000,ko00001,ko01000,ko02035,ko02044	3.A.6.2,3.A.6.3	-	-	ATP-synt_ab,ATP-synt_ab_N
DYD3_k127_4277964_10	439235.Dalk_0671	0.0004761	48.0	COG2882@1|root,COG2882@2|Bacteria,1QSZM@1224|Proteobacteria,437NG@68525|delta/epsilon subdivisions,2X2WP@28221|Deltaproteobacteria,2MKXK@213118|Desulfobacterales	28221|Deltaproteobacteria	NOU	Flagellar FliJ protein	-	-	-	ko:K02413	ko02040,map02040	-	-	-	ko00000,ko00001,ko02035	-	-	-	FliJ
DYD3_k127_4277964_7	1353529.M899_1273	3.149e-36	143.0	COG3334@1|root,COG3334@2|Bacteria,1PT17@1224|Proteobacteria,437BU@68525|delta/epsilon subdivisions,2MTDP@213481|Bdellovibrionales,2X2H9@28221|Deltaproteobacteria	213481|Bdellovibrionales	S	PFAM MgtE intracellular	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_4277964_3	1201288.M900_0917	4.126e-64	237.0	COG4191@1|root,COG4191@2|Bacteria,1R9WR@1224|Proteobacteria,42ZYK@68525|delta/epsilon subdivisions,2MTZK@213481|Bdellovibrionales,2WV76@28221|Deltaproteobacteria	213481|Bdellovibrionales	T	Domain present in phytochromes and cGMP-specific phosphodiesterases.	-	-	-	-	-	-	-	-	-	-	-	-	GAF,HisKA
DYD3_k127_4277964_4	862908.BMS_2922	3.734e-53	199.0	COG1843@1|root,COG1843@2|Bacteria,1MXCG@1224|Proteobacteria,42U4T@68525|delta/epsilon subdivisions,2MT6Y@213481|Bdellovibrionales,2WQ5B@28221|Deltaproteobacteria	213481|Bdellovibrionales	N	Required for flagellar hook formation. May act as a scaffolding protein	flgD	-	-	ko:K02389	ko02040,map02040	-	-	-	ko00000,ko00001,ko02035	-	-	-	FLgD_tudor,FlgD,FlgD_ig
DYD3_k127_4277964_8	862908.BMS_2921	5.363e-34	135.0	2E35U@1|root,32Y5R@2|Bacteria,1NZ3B@1224|Proteobacteria,430FJ@68525|delta/epsilon subdivisions,2MTEI@213481|Bdellovibrionales,2WVN5@28221|Deltaproteobacteria	213481|Bdellovibrionales	N	Putative flagellar	-	-	-	-	-	-	-	-	-	-	-	-	Flagellar_put
DYD3_k127_4277964_1	862908.BMS_2920	5.958e-184	585.0	COG1749@1|root,COG1749@2|Bacteria,1MU5J@1224|Proteobacteria,42NGP@68525|delta/epsilon subdivisions,2MSR0@213481|Bdellovibrionales,2WIZN@28221|Deltaproteobacteria	213481|Bdellovibrionales	N	Flagellar hook protein FlgE	flgE	-	-	ko:K02390	ko02040,map02040	-	-	-	ko00000,ko00001,ko02035	-	-	-	FlaE,Flg_bb_rod,Flg_bbr_C
DYD3_k127_4277964_2	765869.BDW_04005	4.238e-99	341.0	COG0840@1|root,COG0840@2|Bacteria,1MU9B@1224|Proteobacteria,42M22@68525|delta/epsilon subdivisions,2WM8F@28221|Deltaproteobacteria	28221|Deltaproteobacteria	NT	Chemotaxis sensory transducer	mcp64H-1	-	-	ko:K03406	ko02020,ko02030,map02020,map02030	-	-	-	ko00000,ko00001,ko02035	-	-	-	4HB_MCP_1,HAMP,MCPsignal,PAS_4,dCache_1
DYD3_k127_4302694_0	906888.JCM19314_936	1.398e-34	140.0	COG4403@1|root,COG4403@2|Bacteria,4PKR3@976|Bacteroidetes,1I295@117743|Flavobacteriia,3HM2V@363408|Nonlabens	976|Bacteroidetes	V	Lanthionine synthetase C family protein	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_4302694_2	862908.BMS_2171	6.423e-13	74.0	2BZV9@1|root,3474J@2|Bacteria,1P00Y@1224|Proteobacteria,431TB@68525|delta/epsilon subdivisions,2MUCT@213481|Bdellovibrionales,2WX0C@28221|Deltaproteobacteria	213481|Bdellovibrionales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_4302694_1	765869.BDW_08265	5.935e-22	98.0	COG3011@1|root,COG3011@2|Bacteria,1N0YV@1224|Proteobacteria,42VUX@68525|delta/epsilon subdivisions,2MT7T@213481|Bdellovibrionales,2WW8H@28221|Deltaproteobacteria	213481|Bdellovibrionales	S	Protein of unknown function, DUF393	-	-	-	-	-	-	-	-	-	-	-	-	DUF393
DYD3_k127_4351072_0	1499967.BAYZ01000048_gene2713	3.013e-142	467.0	COG2103@1|root,COG2103@2|Bacteria,2NP6Y@2323|unclassified Bacteria	2|Bacteria	S	Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate	murQ	-	4.2.1.126	ko:K07106	ko00520,ko01100,map00520,map01100	-	R08555	RC00397,RC00746	ko00000,ko00001,ko01000	-	-	-	SIS,SIS_2
DYD3_k127_4351072_1	1353529.M899_2375	2.073e-102	375.0	COG3210@1|root,COG5295@1|root,COG3210@2|Bacteria,COG5295@2|Bacteria,1NED3@1224|Proteobacteria,42WDX@68525|delta/epsilon subdivisions,2MTVC@213481|Bdellovibrionales,2WRDH@28221|Deltaproteobacteria	213481|Bdellovibrionales	U	cell wall surface anchor family protein	-	-	-	-	-	-	-	-	-	-	-	-	Peptidase_S74
DYD3_k127_4357759_2	1122137.AQXF01000002_gene233	8.967e-94	316.0	COG5265@1|root,COG5265@2|Bacteria,1NSKS@1224|Proteobacteria,2UQAG@28211|Alphaproteobacteria	28211|Alphaproteobacteria	V	COG5265 ABC-type transport system involved in Fe-S cluster assembly permease and ATPase components	atm1	GO:0003674,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005740,GO:0005743,GO:0006732,GO:0006777,GO:0006793,GO:0006796,GO:0006807,GO:0006873,GO:0006875,GO:0006879,GO:0006996,GO:0007275,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009507,GO:0009526,GO:0009536,GO:0009555,GO:0009657,GO:0009658,GO:0009889,GO:0009941,GO:0009987,GO:0010035,GO:0010038,GO:0010288,GO:0010380,GO:0016020,GO:0016043,GO:0018130,GO:0019222,GO:0019538,GO:0019637,GO:0019720,GO:0019725,GO:0019866,GO:0022622,GO:0030003,GO:0031090,GO:0031323,GO:0031326,GO:0031966,GO:0031967,GO:0031975,GO:0032501,GO:0032502,GO:0042221,GO:0042592,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043545,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044429,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464,GO:0046483,GO:0046686,GO:0046916,GO:0048229,GO:0048364,GO:0048731,GO:0048856,GO:0048878,GO:0050789,GO:0050790,GO:0050794,GO:0050801,GO:0050896,GO:0051171,GO:0051186,GO:0051188,GO:0051189,GO:0051193,GO:0051276,GO:0055065,GO:0055072,GO:0055076,GO:0055080,GO:0055082,GO:0065007,GO:0065008,GO:0065009,GO:0071704,GO:0071840,GO:0090056,GO:0090407,GO:0098771,GO:0099402,GO:1901360,GO:1901362,GO:1901401,GO:1901463,GO:1901564,GO:1901566,GO:1901576	-	ko:K06147	-	-	-	-	ko00000,ko02000	3.A.1.106,3.A.1.109,3.A.1.21	-	-	ABC_membrane,ABC_tran
DYD3_k127_4357759_4	242159.ABO98406	2.149e-85	289.0	COG0491@1|root,KOG0814@2759|Eukaryota,37YI5@33090|Viridiplantae	33090|Viridiplantae	S	Metallo-beta-lactamase superfamily	-	-	1.13.11.18	ko:K17725	ko00920,map00920	-	R08678	RC02313	ko00000,ko00001,ko01000,ko03029	-	-	-	Lactamase_B
DYD3_k127_4357759_6	1184267.A11Q_270	1.575e-39	151.0	COG2391@1|root,COG2391@2|Bacteria,1MZC0@1224|Proteobacteria,43EZ4@68525|delta/epsilon subdivisions,2MT2Z@213481|Bdellovibrionales,2X2Q0@28221|Deltaproteobacteria	213481|Bdellovibrionales	S	Transporter Component	-	-	-	ko:K07112	-	-	-	-	ko00000	-	-	-	Sulf_transp
DYD3_k127_4357759_7	448385.sce2292	4.388e-34	135.0	COG2391@1|root,COG2391@2|Bacteria,1MZ3A@1224|Proteobacteria,42XXQ@68525|delta/epsilon subdivisions,2WSR1@28221|Deltaproteobacteria,2YVMI@29|Myxococcales	28221|Deltaproteobacteria	S	transporter component	-	-	-	ko:K07112	-	-	-	-	ko00000	-	-	-	Sulf_transp
DYD3_k127_4357759_0	886379.AEWI01000018_gene1315	9.491e-274	864.0	COG1554@1|root,COG1554@2|Bacteria,4NFG1@976|Bacteroidetes,2FME6@200643|Bacteroidia,3XJ8I@558415|Marinilabiliaceae	976|Bacteroidetes	G	Glycosyl hydrolase family 65, C-terminal domain	-	-	-	-	-	-	-	-	-	-	-	-	Glyco_hydro_65C,Glyco_hydro_65N,Glyco_hydro_65m
DYD3_k127_4357759_1	865937.Gilli_3177	1.06e-101	348.0	COG0637@1|root,COG1877@1|root,COG0637@2|Bacteria,COG1877@2|Bacteria,4NPCQ@976|Bacteroidetes,1I205@117743|Flavobacteriia	976|Bacteroidetes	G	Removes the phosphate from trehalose 6-phosphate to produce free trehalose	otsB	-	3.1.3.12	ko:K01087	ko00500,ko01100,map00500,map01100	-	R02778	RC00017	ko00000,ko00001,ko01000	-	-	-	HAD_2,Trehalose_PPase
DYD3_k127_4357759_5	1201288.M900_1164	1.377e-80	276.0	COG1344@1|root,COG1344@2|Bacteria,1MV1N@1224|Proteobacteria,42MX8@68525|delta/epsilon subdivisions,2MTHE@213481|Bdellovibrionales,2WKE1@28221|Deltaproteobacteria	213481|Bdellovibrionales	N	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella	fliC	-	-	ko:K02406	ko02020,ko02040,ko04621,ko04626,ko05132,ko05134,map02020,map02040,map04621,map04626,map05132,map05134	-	-	-	ko00000,ko00001,ko02035	-	-	-	Flagellin_C,Flagellin_IN,Flagellin_N
DYD3_k127_4357759_3	1353529.M899_0684	6.747e-91	309.0	COG0123@1|root,COG0123@2|Bacteria,1MU7P@1224|Proteobacteria,42V54@68525|delta/epsilon subdivisions,2WSDI@28221|Deltaproteobacteria	28221|Deltaproteobacteria	BQ	Histone deacetylase	-	-	3.5.1.98	ko:K11418	ko05034,ko05165,ko05203,map05034,map05165,map05203	-	-	-	ko00000,ko00001,ko01000,ko03036	-	-	-	Hist_deacetyl
DYD3_k127_4357759_8	1353529.M899_3083	1.365e-30	124.0	COG2199@1|root,COG3706@2|Bacteria,1QVXG@1224|Proteobacteria,43D39@68525|delta/epsilon subdivisions	1224|Proteobacteria	T	cheY-homologous receiver domain	-	-	-	ko:K03413	ko02020,ko02030,map02020,map02030	M00506	-	-	ko00000,ko00001,ko00002,ko02022,ko02035	-	-	-	Response_reg
DYD3_k127_4396065_5	1353529.M899_2569	1.011e-30	141.0	COG0729@1|root,COG2911@1|root,COG0729@2|Bacteria,COG2911@2|Bacteria,1N928@1224|Proteobacteria	1224|Proteobacteria	M	Chaperone of endosialidase	-	-	-	-	-	-	-	-	-	-	-	-	Peptidase_S74
DYD3_k127_4396065_1	1232437.KL662047_gene5143	1.708e-93	316.0	COG0189@1|root,COG0189@2|Bacteria,1MVDU@1224|Proteobacteria,42MVH@68525|delta/epsilon subdivisions,2WMHB@28221|Deltaproteobacteria,2MME3@213118|Desulfobacterales	28221|Deltaproteobacteria	HJ	Sugar-transfer associated ATP-grasp	-	-	-	-	-	-	-	-	-	-	-	-	ATPgrasp_ST
DYD3_k127_4396065_3	519989.ECTPHS_04009	4.442e-41	170.0	COG1305@1|root,COG1305@2|Bacteria,1MVV3@1224|Proteobacteria,1RRIA@1236|Gammaproteobacteria,1X0CC@135613|Chromatiales	135613|Chromatiales	E	7 transmembrane helices usually fused to an inactive transglutaminase	-	-	-	-	-	-	-	-	-	-	-	-	7TM_transglut,Transglut_i_TM
DYD3_k127_4396065_6	1165841.SULAR_09499	6.401e-22	101.0	COG4067@1|root,COG4067@2|Bacteria,1N0VV@1224|Proteobacteria,43B1S@68525|delta/epsilon subdivisions	1224|Proteobacteria	O	Putative ATP-dependant zinc protease	-	-	-	-	-	-	-	-	-	-	-	-	Zn_protease
DYD3_k127_4396065_0	103690.17132805	5.431e-148	480.0	COG1012@1|root,COG1012@2|Bacteria,1G2U1@1117|Cyanobacteria,1HIJT@1161|Nostocales	1117|Cyanobacteria	C	Belongs to the aldehyde dehydrogenase family	-	-	1.2.1.3,1.2.1.5	ko:K00128,ko:K00129	ko00010,ko00053,ko00071,ko00280,ko00310,ko00330,ko00340,ko00350,ko00360,ko00380,ko00410,ko00561,ko00620,ko00625,ko00903,ko00980,ko00981,ko00982,ko01100,ko01110,ko01120,ko01130,ko05204,map00010,map00053,map00071,map00280,map00310,map00330,map00340,map00350,map00360,map00380,map00410,map00561,map00620,map00625,map00903,map00980,map00981,map00982,map01100,map01110,map01120,map01130,map05204	M00135	R00264,R00631,R00710,R00711,R00904,R01752,R01986,R02536,R02537,R02549,R02678,R02695,R02697,R02940,R02957,R03283,R03300,R03302,R03869,R04065,R04506,R04882,R04883,R04888,R04889,R04891,R04892,R04903,R04996,R05050,R05237,R05238,R05286,R06366,R07104,R08146,R08282,R08283,R08307	RC00047,RC00071,RC00080,RC00186,RC00218,RC00242,RC00816,RC01500,RC01735	ko00000,ko00001,ko00002,ko01000	-	-	-	Aldedh
DYD3_k127_4396065_2	1353529.M899_0159	2.721e-43	164.0	COG4166@1|root,COG4166@2|Bacteria,1P91R@1224|Proteobacteria,42Z5J@68525|delta/epsilon subdivisions,2X7Z6@28221|Deltaproteobacteria	28221|Deltaproteobacteria	E	Bacterial extracellular solute-binding proteins, family 5 Middle	-	-	-	ko:K13893	ko02010,map02010	M00349	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.5.21,3.A.1.5.24	-	-	SBP_bac_5
DYD3_k127_4405213_4	1123400.KB904746_gene1162	9.31e-31	134.0	2C5PI@1|root,333MN@2|Bacteria,1R6UK@1224|Proteobacteria,1RYYP@1236|Gammaproteobacteria	1236|Gammaproteobacteria	S	Transglutaminase elicitor	-	-	-	-	-	-	-	-	-	-	-	-	Ricin_B_lectin,TGase_elicitor
DYD3_k127_4405213_5	1184267.A11Q_1594	2.162e-23	101.0	2BQ39@1|root,32IXQ@2|Bacteria,1Q214@1224|Proteobacteria,437P2@68525|delta/epsilon subdivisions,2MU97@213481|Bdellovibrionales,2X2XA@28221|Deltaproteobacteria	213481|Bdellovibrionales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_4405213_3	85643.Tmz1t_1904	1.826e-39	154.0	COG0625@1|root,COG0625@2|Bacteria,1MY47@1224|Proteobacteria,2VI89@28216|Betaproteobacteria,2KWAP@206389|Rhodocyclales	206389|Rhodocyclales	O	Belongs to the GST superfamily	-	-	2.5.1.18	ko:K00799	ko00480,ko00980,ko00982,ko00983,ko01524,ko05200,ko05204,ko05225,ko05418,map00480,map00980,map00982,map00983,map01524,map05200,map05204,map05225,map05418	-	R03522,R07002,R07003,R07004,R07023,R07024,R07025,R07026,R07069,R07070,R07083,R07084,R07091,R07092,R07093,R07094,R07100,R07113,R07116,R08280,R09409,R11905	RC00004,RC00069,RC00840,RC00948,RC01704,RC01705,RC01706,RC01758,RC01759,RC01765,RC01767,RC01769,RC02243,RC02527,RC02939,RC02940,RC02942,RC02943,RC02944	ko00000,ko00001,ko01000,ko02000	1.A.12.2.2,1.A.12.3.2	-	-	GST_C,GST_N,GST_N_3
DYD3_k127_4405213_0	264462.Bd0080	3.239e-102	336.0	COG0586@1|root,COG0586@2|Bacteria,1MX4M@1224|Proteobacteria,42RQR@68525|delta/epsilon subdivisions,2MTPQ@213481|Bdellovibrionales,2WNTF@28221|Deltaproteobacteria	213481|Bdellovibrionales	S	PFAM SNARE associated Golgi protein	-	-	-	ko:K03975	-	-	-	-	ko00000	-	-	-	SNARE_assoc
DYD3_k127_4405213_6	1123236.KB899377_gene230	2.373e-21	102.0	COG0739@1|root,COG0739@2|Bacteria,1N19D@1224|Proteobacteria,1S8IP@1236|Gammaproteobacteria,467J8@72275|Alteromonadaceae	1236|Gammaproteobacteria	M	Peptidase family M23	-	-	-	-	-	-	-	-	-	-	-	-	DUF4124,Peptidase_M23
DYD3_k127_4405213_7	882082.SaccyDRAFT_1245	7.225e-05	51.0	COG2010@1|root,COG2010@2|Bacteria,2GKUB@201174|Actinobacteria,4E1NK@85010|Pseudonocardiales	201174|Actinobacteria	C	PFAM cytochrome c	qcrC	GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0008150,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0040007,GO:0044425,GO:0044459,GO:0044464,GO:0071944	-	ko:K03889	ko00190,ko01100,map00190,map01100	M00151	-	-	ko00000,ko00001,ko00002	-	-	-	Cytochrome_CBB3
DYD3_k127_4405213_1	243233.MCA2966	9.606e-55	200.0	COG3748@1|root,COG3748@2|Bacteria,1RFIZ@1224|Proteobacteria,1S8F8@1236|Gammaproteobacteria,1XEI4@135618|Methylococcales	135618|Methylococcales	S	Urate oxidase N-terminal	-	-	-	-	-	-	-	-	-	-	-	-	Urate_ox_N
DYD3_k127_4405213_2	1184267.A11Q_1051	2.041e-48	182.0	2EE65@1|root,3380R@2|Bacteria,1NBY9@1224|Proteobacteria,431R5@68525|delta/epsilon subdivisions,2MU0G@213481|Bdellovibrionales,2WWAG@28221|Deltaproteobacteria	213481|Bdellovibrionales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_4405213_8	1047013.AQSP01000144_gene865	0.0002311	48.0	COG1134@1|root,COG1134@2|Bacteria,2NP4S@2323|unclassified Bacteria	2|Bacteria	GM	ATPases associated with a variety of cellular activities	-	-	3.6.3.38	ko:K01990,ko:K09689,ko:K09691	ko02010,map02010	M00249,M00250,M00254	-	-	ko00000,ko00001,ko00002,ko01000,ko02000	3.A.1,3.A.1.101,3.A.1.103	-	-	ABC_tran,Wzt_C
DYD3_k127_4430328_3	1353529.M899_3307	3.443e-42	171.0	COG0745@1|root,COG0745@2|Bacteria,1N1N5@1224|Proteobacteria,43AYP@68525|delta/epsilon subdivisions,2MUSH@213481|Bdellovibrionales,2X6CY@28221|Deltaproteobacteria	213481|Bdellovibrionales	KT	cheY-homologous receiver domain	-	-	-	-	-	-	-	-	-	-	-	-	Response_reg
DYD3_k127_4430328_2	862908.BMS_3224	5.467e-68	240.0	COG0631@1|root,COG0631@2|Bacteria	2|Bacteria	T	protein serine/threonine phosphatase activity	-	-	3.1.3.16	ko:K20074	-	-	-	-	ko00000,ko01000,ko01009	-	-	-	LysM,PP2C_2,SpoIIE
DYD3_k127_4430328_1	862908.BMS_3225	3.164e-157	522.0	COG0457@1|root,COG1716@1|root,COG0457@2|Bacteria,COG1716@2|Bacteria,1RAA4@1224|Proteobacteria,4318T@68525|delta/epsilon subdivisions,2MT82@213481|Bdellovibrionales,2WX2T@28221|Deltaproteobacteria	213481|Bdellovibrionales	T	FHA domain	-	-	-	-	-	-	-	-	-	-	-	-	FHA,Yop-YscD_cpl
DYD3_k127_4430328_6	502558.EGYY_28700	8.091e-12	76.0	COG1716@1|root,COG1716@2|Bacteria,2HUFE@201174|Actinobacteria,4CUEU@84998|Coriobacteriia	84998|Coriobacteriia	T	FHA domain	-	-	-	-	-	-	-	-	-	-	-	-	DUF3662,FHA,Yop-YscD_cpl
DYD3_k127_4430328_0	1353529.M899_3312	4.254e-162	525.0	COG1716@1|root,COG1716@2|Bacteria,1RAA4@1224|Proteobacteria,431UR@68525|delta/epsilon subdivisions,2MT73@213481|Bdellovibrionales,2WWZQ@28221|Deltaproteobacteria	213481|Bdellovibrionales	T	FHA domain	-	-	-	-	-	-	-	-	-	-	-	-	DUF4388,FHA,Yop-YscD_cpl
DYD3_k127_4430328_4	1353529.M899_3313	4.959e-33	132.0	COG1430@1|root,COG1430@2|Bacteria,1N7U4@1224|Proteobacteria,42VKG@68525|delta/epsilon subdivisions,2MT6V@213481|Bdellovibrionales,2WSD0@28221|Deltaproteobacteria	213481|Bdellovibrionales	S	Uncharacterized ACR, COG1430	-	-	-	ko:K09005	-	-	-	-	ko00000	-	-	-	DUF192
DYD3_k127_4430328_5	1201290.M902_1706	8.817e-17	81.0	COG0790@1|root,COG2064@1|root,COG0790@2|Bacteria,COG2064@2|Bacteria,1MWAZ@1224|Proteobacteria,42SJ0@68525|delta/epsilon subdivisions,2MT01@213481|Bdellovibrionales,2WP1Z@28221|Deltaproteobacteria	213481|Bdellovibrionales	NU	Flp pilus assembly protein	-	-	-	ko:K12511	-	-	-	-	ko00000,ko02044	-	-	-	T2SSF
DYD3_k127_4434878_0	215803.DB30_5774	3.767e-47	173.0	COG3696@1|root,COG3696@2|Bacteria,1NUIV@1224|Proteobacteria,42M0A@68525|delta/epsilon subdivisions,2WIQY@28221|Deltaproteobacteria,2YTXB@29|Myxococcales	28221|Deltaproteobacteria	P	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family	-	-	-	ko:K07787	ko02020,map02020	-	-	-	ko00000,ko00001,ko02000	2.A.6.1.4	-	-	ACR_tran
DYD3_k127_4434878_2	1121101.HMPREF1532_04001	5.44e-06	61.0	COG5263@1|root,COG5434@1|root,COG5263@2|Bacteria,COG5434@2|Bacteria,4NFSC@976|Bacteroidetes,2FNQN@200643|Bacteroidia,4AKDU@815|Bacteroidaceae	976|Bacteroidetes	G	Belongs to the glycosyl hydrolase 28 family	-	-	-	-	-	-	-	-	-	-	-	-	Glyco_hydro_28
DYD3_k127_4434878_1	670307.HYPDE_34883	4.258e-08	64.0	2AYWY@1|root,31R2N@2|Bacteria,1R3NV@1224|Proteobacteria	1224|Proteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_4486380_10	862908.BMS_1747	5.853e-16	78.0	COG0019@1|root,COG0019@2|Bacteria,1MUA6@1224|Proteobacteria,42KZH@68525|delta/epsilon subdivisions,2WIRM@28221|Deltaproteobacteria	28221|Deltaproteobacteria	E	Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine	-	-	4.1.1.20	ko:K01586	ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00300,map01100,map01110,map01120,map01130,map01230	M00016,M00525,M00526,M00527	R00451	RC00299	ko00000,ko00001,ko00002,ko01000	-	-	-	Orn_Arg_deC_N,Orn_DAP_Arg_deC
DYD3_k127_4486380_6	1263831.F543_22560	6.07e-44	164.0	COG4922@1|root,COG4922@2|Bacteria,1RDM5@1224|Proteobacteria,1S654@1236|Gammaproteobacteria,1Y956@135625|Pasteurellales	135625|Pasteurellales	S	protein conserved in bacteria	-	-	-	-	-	-	-	-	-	-	-	-	SnoaL,SnoaL_2
DYD3_k127_4486380_7	1434929.X946_5448	3.893e-26	111.0	2DNX2@1|root,32ZMB@2|Bacteria,1ND3X@1224|Proteobacteria,2W5RC@28216|Betaproteobacteria	28216|Betaproteobacteria	S	Protein of unknown function (DUF2834)	-	-	-	-	-	-	-	-	-	-	-	-	DUF2834
DYD3_k127_4486380_1	331678.Cphamn1_1408	3.785e-139	475.0	COG0308@1|root,COG0308@2|Bacteria,1FEVH@1090|Chlorobi	1090|Chlorobi	E	PFAM Peptidase M1 membrane alanine aminopeptidase	-	-	3.4.11.2	ko:K01256	ko00480,ko01100,map00480,map01100	-	R00899,R04951	RC00096,RC00141	ko00000,ko00001,ko01000,ko01002	-	-	-	ERAP1_C,Peptidase_M1
DYD3_k127_4486380_8	1128421.JAGA01000003_gene3728	5.328e-24	106.0	COG0745@1|root,COG0745@2|Bacteria	1128421.JAGA01000003_gene3728|-	T	phosphorelay signal transduction system	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_4486380_3	1120985.AUMI01000021_gene2782	9.335e-52	194.0	COG2199@1|root,COG2984@1|root,COG2984@2|Bacteria,COG3706@2|Bacteria,1UMZ2@1239|Firmicutes,4H9I5@909932|Negativicutes	1239|Firmicutes	T	ABC transporter substrate binding protein	-	-	-	-	-	-	-	-	-	-	-	-	ABC_sub_bind,PAS
DYD3_k127_4486380_5	448385.sce1494	8.363e-46	177.0	COG0515@1|root,COG0642@1|root,COG2203@1|root,COG3899@1|root,COG0515@2|Bacteria,COG2203@2|Bacteria,COG2205@2|Bacteria,COG3899@2|Bacteria,1R72I@1224|Proteobacteria	1224|Proteobacteria	T	Histidine kinase	-	-	-	-	-	-	-	-	-	-	-	-	4HB_MCP_1,AAA_16,HAMP,HATPase_c,HisKA,PAS,PAS_4,PAS_7,Pkinase
DYD3_k127_4486380_12	321332.CYB_2053	5.486e-09	64.0	2BZXA@1|root,33P5U@2|Bacteria	2|Bacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_4486380_4	765869.BDW_09610	8.684e-51	190.0	COG5640@1|root,COG5640@2|Bacteria,1RIHF@1224|Proteobacteria,42STC@68525|delta/epsilon subdivisions,2MTHC@213481|Bdellovibrionales,2WPTD@28221|Deltaproteobacteria	213481|Bdellovibrionales	O	Trypsin-like serine protease	-	-	3.4.21.4	ko:K01312	ko04080,ko04972,ko04974,ko05164,map04080,map04972,map04974,map05164	-	-	-	ko00000,ko00001,ko01000,ko01002,ko04147	-	-	-	PPC,Trypsin
DYD3_k127_4486380_0	1353529.M899_1222	1.097e-276	859.0	COG0318@1|root,COG0318@2|Bacteria,1MU6G@1224|Proteobacteria,42M5F@68525|delta/epsilon subdivisions,2MSSD@213481|Bdellovibrionales,2WISF@28221|Deltaproteobacteria	213481|Bdellovibrionales	IQ	PFAM AMP-dependent synthetase and ligase	fadD	-	6.2.1.3	ko:K01897	ko00061,ko00071,ko01100,ko01212,ko02024,ko03320,ko04146,ko04216,ko04714,ko04920,map00061,map00071,map01100,map01212,map02024,map03320,map04146,map04216,map04714,map04920	M00086	R01280	RC00004,RC00014	ko00000,ko00001,ko00002,ko01000,ko01004,ko04147	4.C.1.1	-	-	AMP-binding,AMP-binding_C
DYD3_k127_4486380_9	1353529.M899_0410	9.795e-21	94.0	COG1544@1|root,COG1544@2|Bacteria	2|Bacteria	J	regulation of translation	hpf	GO:0003674,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006417,GO:0006448,GO:0008150,GO:0009889,GO:0009890,GO:0009892,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010608,GO:0010629,GO:0015935,GO:0016020,GO:0017148,GO:0019222,GO:0022626,GO:0022627,GO:0030312,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032268,GO:0032269,GO:0032991,GO:0034248,GO:0034249,GO:0043021,GO:0043022,GO:0043024,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0044877,GO:0045900,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051246,GO:0051248,GO:0060255,GO:0065007,GO:0071944,GO:0080090,GO:1990904,GO:2000112,GO:2000113	-	ko:K05808	-	-	-	-	ko00000,ko03009	-	-	-	Ribosom_S30AE_C,Ribosomal_S30AE
DYD3_k127_4486380_13	330084.JNYZ01000048_gene2974	2.121e-07	61.0	COG0500@1|root,COG2226@2|Bacteria,2I4JP@201174|Actinobacteria,4EE1X@85010|Pseudonocardiales	201174|Actinobacteria	Q	Thiopurine S-methyltransferase (TPMT)	-	-	-	-	-	-	-	-	-	-	-	-	Methyltransf_25
DYD3_k127_4486380_2	686340.Metal_1885	2.552e-58	211.0	COG2267@1|root,COG2267@2|Bacteria,1RBM5@1224|Proteobacteria,1S64F@1236|Gammaproteobacteria,1XE79@135618|Methylococcales	135618|Methylococcales	I	PFAM alpha beta hydrolase	-	-	-	-	-	-	-	-	-	-	-	-	Hydrolase_4
DYD3_k127_4496423_9	1117958.PE143B_0111320	4.727e-47	173.0	COG2050@1|root,COG2050@2|Bacteria,1RH0Z@1224|Proteobacteria,1S5W6@1236|Gammaproteobacteria	1236|Gammaproteobacteria	Q	Domain of unknown function (DUF4442)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4442
DYD3_k127_4496423_12	1117647.M5M_07965	2.228e-21	98.0	COG2050@1|root,COG2050@2|Bacteria,1QN1J@1224|Proteobacteria,1SGAA@1236|Gammaproteobacteria	1236|Gammaproteobacteria	Q	protein possibly involved in aromatic compounds catabolism	-	-	-	-	-	-	-	-	-	-	-	-	4HBT
DYD3_k127_4496423_13	1538295.JY96_05885	3.905e-18	91.0	COG1309@1|root,COG1309@2|Bacteria,1QAIA@1224|Proteobacteria,2VRGN@28216|Betaproteobacteria	28216|Betaproteobacteria	K	Bacterial regulatory proteins, tetR family	-	-	-	ko:K16137	-	-	-	-	ko00000,ko03000	-	-	-	TetR_N
DYD3_k127_4496423_0	1122169.AREN01000022_gene41	7.122e-195	616.0	COG0183@1|root,COG0183@2|Bacteria,1MU5G@1224|Proteobacteria,1RNGU@1236|Gammaproteobacteria,1JCEU@118969|Legionellales	118969|Legionellales	I	Thiolase, C-terminal domain	-	-	-	-	-	-	-	-	-	-	-	-	Thiolase_C,Thiolase_N
DYD3_k127_4496423_10	1121952.ATXT01000013_gene1997	5.721e-38	148.0	COG0824@1|root,COG0824@2|Bacteria,2IHBJ@201174|Actinobacteria,4FNDN@85023|Microbacteriaceae	201174|Actinobacteria	S	Thioesterase-like superfamily	-	-	-	-	-	-	-	-	-	-	-	-	4HBT_2
DYD3_k127_4496423_3	1519464.HY22_01900	6.7e-96	324.0	COG0123@1|root,COG0123@2|Bacteria	2|Bacteria	BQ	including yeast histone deacetylase and acetoin utilization protein	acuC	-	-	-	-	-	-	-	-	-	-	-	Hist_deacetyl
DYD3_k127_4496423_8	1353529.M899_1996	2.472e-50	187.0	COG3897@1|root,COG3897@2|Bacteria,1MUWA@1224|Proteobacteria,42NV1@68525|delta/epsilon subdivisions,2WJZ9@28221|Deltaproteobacteria	28221|Deltaproteobacteria	S	Lysine methyltransferase	-	-	-	-	-	-	-	-	-	-	-	-	Methyltransf_11,Methyltransf_16,PrmA
DYD3_k127_4496423_7	945713.IALB_0515	1.1e-63	224.0	COG1225@1|root,COG1225@2|Bacteria	2|Bacteria	O	peroxiredoxin activity	-	-	-	-	-	-	-	-	-	-	-	-	AhpC-TSA
DYD3_k127_4496423_5	1353529.M899_1695	2.253e-82	289.0	COG1858@1|root,COG1858@2|Bacteria,1MV70@1224|Proteobacteria,42ZJK@68525|delta/epsilon subdivisions,2WV14@28221|Deltaproteobacteria	28221|Deltaproteobacteria	C	Di-haem cytochrome c peroxidase	-	-	1.11.1.5	ko:K00428	-	-	-	-	ko00000,ko01000	-	-	-	CCP_MauG
DYD3_k127_4496423_6	862908.BMS_2482	1.132e-75	261.0	COG0217@1|root,COG0217@2|Bacteria,1MW3X@1224|Proteobacteria,42N7Q@68525|delta/epsilon subdivisions,2MT4F@213481|Bdellovibrionales,2WJ1I@28221|Deltaproteobacteria	213481|Bdellovibrionales	K	transcriptional regulatory protein	-	-	-	-	-	-	-	-	-	-	-	-	Transcrip_reg
DYD3_k127_4496423_1	862908.BMS_1327	8.938e-143	460.0	COG0332@1|root,COG0332@2|Bacteria,1MU9N@1224|Proteobacteria,42MU6@68525|delta/epsilon subdivisions,2MSQV@213481|Bdellovibrionales,2WIJN@28221|Deltaproteobacteria	213481|Bdellovibrionales	I	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids	-	-	2.3.1.180	ko:K00648	ko00061,ko01100,ko01212,map00061,map01100,map01212	M00082,M00083	R10707	RC00004,RC02729,RC02888	ko00000,ko00001,ko00002,ko01000,ko01004	-	-	-	ACP_syn_III,ACP_syn_III_C
DYD3_k127_4496423_4	1201290.M902_2686	2.987e-90	302.0	COG1838@1|root,COG1838@2|Bacteria,1R33Y@1224|Proteobacteria,43DIX@68525|delta/epsilon subdivisions,2MUNI@213481|Bdellovibrionales,2WK6Z@28221|Deltaproteobacteria	213481|Bdellovibrionales	C	TIGRFAM hydro-lyase, Fe-S type, tartrate fumarate subfamily, beta subunit	-	-	4.2.1.2	ko:K01676,ko:K01678	ko00020,ko00620,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00620,map00720,map01100,map01110,map01120,map01130,map01200	M00009,M00011,M00173,M00374,M00620	R01082	RC00443	ko00000,ko00001,ko00002,ko01000	-	-	-	Fumerase_C
DYD3_k127_4496423_2	1201288.M900_A0015	9.229e-136	439.0	COG1951@1|root,COG1951@2|Bacteria,1MUV9@1224|Proteobacteria,42MC7@68525|delta/epsilon subdivisions,2WKIV@28221|Deltaproteobacteria	28221|Deltaproteobacteria	C	hydro-lyase, Fe-S type, tartrate fumarate subfamily, alpha subunit	fumA	-	4.2.1.2	ko:K01677	ko00020,ko00620,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00620,map00720,map01100,map01110,map01120,map01130,map01200	M00009,M00011,M00173,M00374,M00620	R01082	RC00443	ko00000,ko00001,ko00002,ko01000	-	-	-	Fumerase
DYD3_k127_4496423_11	1448857.JFAP01000001_gene998	1.242e-25	111.0	COG0071@1|root,COG0071@2|Bacteria,1N7C7@1224|Proteobacteria,42U0T@68525|delta/epsilon subdivisions,2YPJX@29547|Epsilonproteobacteria	29547|Epsilonproteobacteria	O	Belongs to the small heat shock protein (HSP20) family	-	-	-	ko:K13993	ko04141,map04141	-	-	-	ko00000,ko00001,ko03110	-	-	-	HSP20
DYD3_k127_4502978_1	1353529.M899_0125	5.75e-43	166.0	COG0169@1|root,COG0169@2|Bacteria	2|Bacteria	E	shikimate 3-dehydrogenase (NADP+) activity	aroE	GO:0000166,GO:0003674,GO:0003824,GO:0004764,GO:0005488,GO:0006082,GO:0008150,GO:0008152,GO:0009058,GO:0009423,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0019632,GO:0019752,GO:0032787,GO:0036094,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046417,GO:0048037,GO:0050661,GO:0050662,GO:0055114,GO:0071704,GO:0097159,GO:1901265,GO:1901363,GO:1901576,GO:1901615	1.1.1.25	ko:K00014	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	M00022	R02413	RC00206	ko00000,ko00001,ko00002,ko01000	-	-	-	Shikimate_DH,Shikimate_dh_N
DYD3_k127_4502978_0	1353529.M899_0124	3.955e-94	317.0	COG0196@1|root,COG0196@2|Bacteria,1MV9I@1224|Proteobacteria,42MV7@68525|delta/epsilon subdivisions,2MSZ8@213481|Bdellovibrionales,2WJTU@28221|Deltaproteobacteria	213481|Bdellovibrionales	H	Belongs to the ribF family	ribF	-	2.7.1.26,2.7.7.2	ko:K11753	ko00740,ko01100,ko01110,map00740,map01100,map01110	M00125	R00161,R00549	RC00002,RC00017	ko00000,ko00001,ko00002,ko01000	-	-	-	FAD_syn,Flavokinase
DYD3_k127_4502978_2	1353529.M899_0123	6.529e-07	59.0	COG0457@1|root,COG0457@2|Bacteria,1MXK4@1224|Proteobacteria,42PK9@68525|delta/epsilon subdivisions,2MTTA@213481|Bdellovibrionales,2WM9F@28221|Deltaproteobacteria	213481|Bdellovibrionales	S	Oxygen tolerance	-	-	-	-	-	-	-	-	-	-	-	-	BatD
DYD3_k127_4509613_5	1232437.KL661986_gene3676	1.166e-17	95.0	2C6BE@1|root,32XBJ@2|Bacteria,1NB89@1224|Proteobacteria	1224|Proteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_4509613_1	926556.Echvi_3048	4.378e-129	420.0	COG1262@1|root,COG1262@2|Bacteria,4NFR2@976|Bacteroidetes,47KU9@768503|Cytophagia	976|Bacteroidetes	S	Sulfatase-modifying factor enzyme 1	-	-	1.8.3.7	ko:K13444	ko04142,map04142	-	-	-	ko00000,ko00001,ko01000	-	-	-	FGE-sulfatase
DYD3_k127_4509613_0	264462.Bd0658	5.512e-172	558.0	COG0475@1|root,COG1226@1|root,COG0475@2|Bacteria,COG1226@2|Bacteria,1MV34@1224|Proteobacteria,42MEM@68525|delta/epsilon subdivisions,2MSZX@213481|Bdellovibrionales,2WK23@28221|Deltaproteobacteria	213481|Bdellovibrionales	P	Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family	-	-	-	ko:K03455,ko:K11747	-	-	-	-	ko00000,ko02000	2.A.37,2.A.37.1.2	-	-	Na_H_Exchanger,TrkA_C,TrkA_N
DYD3_k127_4509613_2	1184267.A11Q_163	8.194e-104	344.0	2AZA3@1|root,31RHA@2|Bacteria,1RHW9@1224|Proteobacteria	1224|Proteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_4509613_3	1201288.M900_1829	1.316e-27	116.0	29WP5@1|root,30IA2@2|Bacteria,1RKVM@1224|Proteobacteria,432HP@68525|delta/epsilon subdivisions,2MUJI@213481|Bdellovibrionales,2WY0H@28221|Deltaproteobacteria	213481|Bdellovibrionales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_4509613_8	264462.Bd2656	2.483e-11	69.0	2A02H@1|root,30N4X@2|Bacteria,1RF69@1224|Proteobacteria,433H4@68525|delta/epsilon subdivisions,2MUF2@213481|Bdellovibrionales,2WYFT@28221|Deltaproteobacteria	213481|Bdellovibrionales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_4509613_7	762966.HMPREF9439_02442	1.685e-11	70.0	arCOG06631@1|root,32RY6@2|Bacteria,1NF8K@1224|Proteobacteria,2VY55@28216|Betaproteobacteria	28216|Betaproteobacteria	S	PFAM EamA-like transporter family	-	-	-	-	-	-	-	-	-	-	-	-	EamA
DYD3_k127_4509613_4	1123376.AUIU01000011_gene1122	2.465e-21	104.0	COG0583@1|root,COG1910@1|root,COG0583@2|Bacteria,COG1910@2|Bacteria,3J16P@40117|Nitrospirae	40117|Nitrospirae	K	Transcriptional regulator	-	-	-	ko:K11921,ko:K19338	-	-	-	-	ko00000,ko03000	-	-	-	HTH_1,LysR_substrate
DYD3_k127_4509613_6	765869.BDW_00390	1.643e-13	72.0	COG0671@1|root,COG0671@2|Bacteria	2|Bacteria	I	phosphatidate phosphatase activity	-	-	3.6.1.27	ko:K19302	ko00550,map00550	-	R05627	RC00002	ko00000,ko00001,ko01000,ko01011	-	-	-	DUF3703,PAP2
DYD3_k127_4517579_8	765869.BDW_12470	1.405e-45	171.0	COG2801@1|root,COG2801@2|Bacteria,1PNRG@1224|Proteobacteria,43ASC@68525|delta/epsilon subdivisions,2MUHW@213481|Bdellovibrionales,2X6AZ@28221|Deltaproteobacteria	68525|delta/epsilon subdivisions	L	COG2801 Transposase and inactivated derivatives	-	-	-	-	-	-	-	-	-	-	-	-	HTH_21,rve
DYD3_k127_4517579_18	1122915.AUGY01000001_gene7129	0.0008692	46.0	COG2801@1|root,COG2801@2|Bacteria,1TU21@1239|Firmicutes,4HDK4@91061|Bacilli,26T86@186822|Paenibacillaceae	91061|Bacilli	L	PFAM Integrase catalytic region	-	-	-	ko:K07497	-	-	-	-	ko00000	-	-	-	HTH_21,rve
DYD3_k127_4517579_2	1201288.M900_1687	1.072e-94	322.0	COG1404@1|root,COG1404@2|Bacteria	2|Bacteria	O	Belongs to the peptidase S8 family	-	-	3.4.21.96	ko:K01361,ko:K13274	-	-	-	-	ko00000,ko01000,ko01002,ko03110	-	-	-	Big_2,PA,Peptidase_S8,fn3,fn3_5
DYD3_k127_4517579_12	1249975.JQLP01000005_gene2384	4.102e-25	106.0	COG4628@1|root,COG4628@2|Bacteria,4NUS1@976|Bacteroidetes,1I55S@117743|Flavobacteriia,2P71R@244698|Gillisia	976|Bacteroidetes	S	DNA-binding protein VF530	-	-	-	-	-	-	-	-	-	-	-	-	VF530
DYD3_k127_4517579_9	211165.AJLN01000079_gene364	1.912e-44	176.0	28M5B@1|root,2ZAJ4@2|Bacteria	2|Bacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_4517579_13	742159.HMPREF0004_5275	2.36e-23	109.0	2C3WA@1|root,2Z8P1@2|Bacteria,1R8VC@1224|Proteobacteria,2VQ8D@28216|Betaproteobacteria	28216|Betaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_4517579_1	264462.Bd2632	3.344e-150	491.0	COG2272@1|root,COG2272@2|Bacteria,1MVQZ@1224|Proteobacteria,42SI4@68525|delta/epsilon subdivisions,2MTUG@213481|Bdellovibrionales,2WPHR@28221|Deltaproteobacteria	213481|Bdellovibrionales	I	Carboxylesterase family	-	-	-	ko:K03929	-	-	-	-	ko00000,ko01000	-	CE10	-	COesterase
DYD3_k127_4517579_17	1219031.BBJR01000024_gene307	1.028e-10	68.0	COG0724@1|root,COG0724@2|Bacteria	2|Bacteria	K	RNA recognition motif	rbpA	-	-	-	-	-	-	-	-	-	-	-	RRM_1
DYD3_k127_4517579_11	264462.Bd0329	1.101e-28	119.0	COG4538@1|root,COG4538@2|Bacteria	2|Bacteria	S	SnoaL-like domain	-	-	-	ko:K07023	-	-	-	-	ko00000	-	-	-	SnoaL_2
DYD3_k127_4517579_0	264462.Bd0328	5.817e-162	527.0	COG0457@1|root,COG0457@2|Bacteria,1QY1G@1224|Proteobacteria,43C8T@68525|delta/epsilon subdivisions,2MUD4@213481|Bdellovibrionales,2X7J5@28221|Deltaproteobacteria	213481|Bdellovibrionales	S	ASPIC and UnbV	-	-	-	-	-	-	-	-	-	-	-	-	UnbV_ASPIC,VCBS
DYD3_k127_4517579_6	264462.Bd0327	3.574e-52	193.0	COG1028@1|root,COG1028@2|Bacteria,1RH9P@1224|Proteobacteria,431GA@68525|delta/epsilon subdivisions,2WWSC@28221|Deltaproteobacteria	28221|Deltaproteobacteria	IQ	Enoyl-(Acyl carrier protein) reductase	-	-	1.1.1.320	ko:K16216	-	-	-	-	ko00000,ko01000	-	-	-	adh_short
DYD3_k127_4517579_14	1201290.M902_1098	3.236e-22	105.0	COG0501@1|root,COG0501@2|Bacteria,1NF76@1224|Proteobacteria,42WFB@68525|delta/epsilon subdivisions,2MTHK@213481|Bdellovibrionales,2WSAI@28221|Deltaproteobacteria	213481|Bdellovibrionales	O	Belongs to the peptidase M48B family	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_4517579_10	1185876.BN8_04463	2.064e-36	146.0	2DM5T@1|root,31U0Y@2|Bacteria,4NMMA@976|Bacteroidetes,47NQ4@768503|Cytophagia	976|Bacteroidetes	S	Domain of unknown function (DUF4126)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4126
DYD3_k127_4517579_7	227377.CBU_0773	3.814e-50	182.0	COG2764@1|root,COG2764@2|Bacteria,1RF5T@1224|Proteobacteria,1S5YT@1236|Gammaproteobacteria,1JF2S@118969|Legionellales	118969|Legionellales	S	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily	-	-	-	ko:K04750	-	-	-	-	ko00000	-	-	-	Glyoxalase
DYD3_k127_4517579_3	1201288.M900_0587	2.84e-75	264.0	COG3509@1|root,COG3509@2|Bacteria,1NTIV@1224|Proteobacteria	1224|Proteobacteria	Q	depolymerase	-	-	3.1.1.75	ko:K05973	ko00650,map00650	-	R05118	-	ko00000,ko00001,ko01000	-	-	-	Esterase_phd
DYD3_k127_4517579_15	929562.Emtol_1275	2.091e-21	102.0	COG2340@1|root,COG2340@2|Bacteria,4NNKS@976|Bacteroidetes	976|Bacteroidetes	S	Pfam Cysteine-rich secretory protein family	-	-	-	-	-	-	-	-	-	-	-	-	CAP
DYD3_k127_4549928_2	862908.BMS_3002	6.08e-95	315.0	COG0601@1|root,COG0601@2|Bacteria,1MU8Z@1224|Proteobacteria,43AFB@68525|delta/epsilon subdivisions	1224|Proteobacteria	P	COG0601 ABC-type dipeptide oligopeptide nickel transport systems, permease components	oppB	-	-	ko:K02033,ko:K15585	ko02010,ko02024,map02010,map02024	M00239,M00440	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.5	-	-	BPD_transp_1
DYD3_k127_4549928_1	1353529.M899_3106	1.579e-126	409.0	COG1173@1|root,COG1173@2|Bacteria,1MU26@1224|Proteobacteria,42MFP@68525|delta/epsilon subdivisions,2WJ47@28221|Deltaproteobacteria	28221|Deltaproteobacteria	P	PFAM binding-protein-dependent transport systems inner membrane component	-	-	-	ko:K02034	ko02024,map02024	M00239	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.5	-	-	BPD_transp_1,OppC_N
DYD3_k127_4549928_0	862908.BMS_0503	1.587e-243	764.0	COG1123@1|root,COG4172@2|Bacteria,1MU09@1224|Proteobacteria,43BKT@68525|delta/epsilon subdivisions,2MTIM@213481|Bdellovibrionales,2X7JM@28221|Deltaproteobacteria	213481|Bdellovibrionales	P	Oligopeptide/dipeptide transporter, C-terminal region	-	-	-	ko:K02031,ko:K02032	ko02024,map02024	M00239	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.5	-	-	ABC_tran,oligo_HPY
DYD3_k127_4549928_3	1381751.JAJB01000020_gene1819	8.278e-57	216.0	COG0591@1|root,COG0591@2|Bacteria,2HYJD@201174|Actinobacteria,4F8CT@85019|Brevibacteriaceae	201174|Actinobacteria	E	Sodium:solute symporter family	-	-	-	-	-	-	-	-	-	-	-	-	SSF
DYD3_k127_4549928_5	610130.Closa_3879	4.849e-05	55.0	COG0840@1|root,COG3437@1|root,COG0840@2|Bacteria,COG3437@2|Bacteria,1TQ0S@1239|Firmicutes,24800@186801|Clostridia,223RM@1506553|Lachnoclostridium	186801|Clostridia	T	Diguanylate cyclase and metal dependent phosphohydrolase	-	-	-	-	-	-	-	-	-	-	-	-	GGDEF,HD,HD_5,PAS,PAS_3,PAS_4,PAS_9
DYD3_k127_4550361_3	1896.JOAU01000033_gene5473	5.265e-05	51.0	COG0640@1|root,COG0640@2|Bacteria,2IHVU@201174|Actinobacteria	201174|Actinobacteria	K	transcriptional	-	-	-	-	-	-	-	-	-	-	-	-	HTH_20
DYD3_k127_4550361_0	862908.BMS_2506	9.104e-146	480.0	COG1132@1|root,COG1132@2|Bacteria,1MUBM@1224|Proteobacteria,42NCR@68525|delta/epsilon subdivisions,2WKMY@28221|Deltaproteobacteria	28221|Deltaproteobacteria	V	ABC transporter transmembrane region	-	-	-	ko:K18889	ko02010,map02010	M00707	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.106.13,3.A.1.106.5	-	-	ABC_membrane,ABC_tran
DYD3_k127_4550361_2	1157490.EL26_00380	1.934e-31	141.0	COG1132@1|root,COG1132@2|Bacteria,1TP0B@1239|Firmicutes,4HESN@91061|Bacilli,279AB@186823|Alicyclobacillaceae	91061|Bacilli	V	ABC transporter transmembrane region	-	-	-	ko:K18890	ko02010,map02010	M00707	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.106.13,3.A.1.106.5	-	-	ABC_membrane,ABC_tran
DYD3_k127_4550361_1	1353529.M899_2480	9.736e-123	403.0	COG1651@1|root,COG1651@2|Bacteria,1MX2T@1224|Proteobacteria,42S4E@68525|delta/epsilon subdivisions,2WNJ8@28221|Deltaproteobacteria	28221|Deltaproteobacteria	O	Thioredoxin	-	-	-	-	-	-	-	-	-	-	-	-	SurA_N_3,Thioredoxin_4
DYD3_k127_4611896_3	1128427.KB904821_gene2934	5.307e-42	164.0	COG0412@1|root,COG0412@2|Bacteria,1G0PH@1117|Cyanobacteria,1H6WV@1150|Oscillatoriales	1117|Cyanobacteria	Q	dienelactone hydrolase	clcD	-	3.1.1.45	ko:K01061	ko00361,ko00364,ko00623,ko01100,ko01110,ko01120,ko01130,map00361,map00364,map00623,map01100,map01110,map01120,map01130	-	R03893,R05510,R05511,R06835,R06838,R08120,R08121,R09136,R09220,R09222	RC01018,RC01906,RC01907,RC02441,RC02467,RC02468,RC02674,RC02675,RC02686	ko00000,ko00001,ko01000	-	-	-	DLH
DYD3_k127_4611896_1	472759.Nhal_3832	4.453e-99	338.0	COG5492@1|root,COG5492@2|Bacteria,1QXT5@1224|Proteobacteria,1T4IG@1236|Gammaproteobacteria,1X2RJ@135613|Chromatiales	135613|Chromatiales	N	domain, Protein	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_4611896_0	472759.Nhal_3833	5.598e-138	469.0	COG1629@1|root,COG4206@1|root,COG1629@2|Bacteria,COG4206@2|Bacteria,1MX4K@1224|Proteobacteria,1RP6B@1236|Gammaproteobacteria,1X0CV@135613|Chromatiales	135613|Chromatiales	P	TonB dependent receptor	-	-	-	-	-	-	-	-	-	-	-	-	Plug,TonB_dep_Rec
DYD3_k127_4611896_6	6087.XP_002160000.2	0.000512	51.0	COG0666@1|root,KOG3609@1|root,KOG3609@2759|Eukaryota,KOG4177@2759|Eukaryota,38C1F@33154|Opisthokonta,3BERP@33208|Metazoa	33208|Metazoa	U	spectrin binding	-	-	-	-	-	-	-	-	-	-	-	-	Ank_2,Ion_trans
DYD3_k127_4611896_2	765869.BDW_01675	5.984e-52	190.0	COG0811@1|root,COG0811@2|Bacteria,1NBED@1224|Proteobacteria,42WAH@68525|delta/epsilon subdivisions,2MTKG@213481|Bdellovibrionales,2X5KM@28221|Deltaproteobacteria	213481|Bdellovibrionales	U	MotA TolQ ExbB proton channel family	-	-	-	ko:K03561	-	-	-	-	ko00000,ko02000	1.A.30.2.1	-	-	MotA_ExbB
DYD3_k127_4611896_4	765869.BDW_01680	1.49e-25	110.0	COG0848@1|root,COG0848@2|Bacteria,1NE2Q@1224|Proteobacteria,42VAE@68525|delta/epsilon subdivisions,2MTD6@213481|Bdellovibrionales,2WRCE@28221|Deltaproteobacteria	213481|Bdellovibrionales	U	Biopolymer transport protein ExbD TolR	-	-	-	ko:K03559	-	-	-	-	ko00000,ko02000	1.A.30.2.1	-	-	ExbD
DYD3_k127_461295_13	1120970.AUBZ01000005_gene456	3.92e-27	117.0	COG0835@1|root,COG0835@2|Bacteria,1RAH1@1224|Proteobacteria,1SYDF@1236|Gammaproteobacteria,466IY@72275|Alteromonadaceae	1236|Gammaproteobacteria	NT	COG0835 Chemotaxis signal transduction protein	cheW	-	-	ko:K03408	ko02020,ko02030,map02020,map02030	-	-	-	ko00000,ko00001,ko02035	-	-	-	CheW
DYD3_k127_461295_17	153721.MYP_1801	1.174e-11	78.0	28IEX@1|root,2Z8GX@2|Bacteria,4NGBY@976|Bacteroidetes,47NK3@768503|Cytophagia	976|Bacteroidetes	S	Putative beta-barrel porin-2, OmpL-like. bbp2	-	-	-	-	-	-	-	-	-	-	-	-	BBP2
DYD3_k127_461295_12	1353529.M899_1268	1.695e-30	122.0	COG1141@1|root,COG1141@2|Bacteria,1NK1Y@1224|Proteobacteria,42XS4@68525|delta/epsilon subdivisions,2MU94@213481|Bdellovibrionales,2WTBH@28221|Deltaproteobacteria	213481|Bdellovibrionales	C	4Fe-4S single cluster domain of Ferredoxin I	-	-	-	ko:K05337	-	-	-	-	ko00000	-	-	-	Fer4_13
DYD3_k127_461295_4	862908.BMS_2917	2.032e-80	287.0	COG0760@1|root,COG0760@2|Bacteria,1MWV0@1224|Proteobacteria,42MPK@68525|delta/epsilon subdivisions,2MT9C@213481|Bdellovibrionales,2WJM1@28221|Deltaproteobacteria	213481|Bdellovibrionales	O	peptidyl-prolyl isomerase	nifM	-	5.2.1.8	ko:K03770	-	-	-	-	ko00000,ko01000,ko03110	-	-	-	Rotamase,Rotamase_2,Rotamase_3,SurA_N_3
DYD3_k127_461295_5	1201290.M902_0502	9.295e-79	273.0	COG1792@1|root,COG1792@2|Bacteria,1N8ZS@1224|Proteobacteria,42QYH@68525|delta/epsilon subdivisions,2MUPX@213481|Bdellovibrionales,2WMXP@28221|Deltaproteobacteria	213481|Bdellovibrionales	M	Involved in formation and maintenance of cell shape	mreC	-	-	ko:K03570	-	-	-	-	ko00000,ko03036	9.B.157.1	-	-	MreC
DYD3_k127_461295_0	1353529.M899_1264	6.297e-254	798.0	COG0768@1|root,COG0768@2|Bacteria,1MV8C@1224|Proteobacteria,42M1S@68525|delta/epsilon subdivisions,2MSV4@213481|Bdellovibrionales,2WJ02@28221|Deltaproteobacteria	213481|Bdellovibrionales	M	Penicillin-binding protein 2	mrdA	-	3.4.16.4	ko:K05515	ko00550,ko01501,map00550,map01501	-	-	-	ko00000,ko00001,ko01000,ko01011	-	-	iAF987.Gmet_0928	PBP_dimer,Transpeptidase
DYD3_k127_461295_2	862908.BMS_2913	1.147e-151	487.0	COG0772@1|root,COG0772@2|Bacteria,1MUK3@1224|Proteobacteria,42MQT@68525|delta/epsilon subdivisions,2MSU0@213481|Bdellovibrionales,2WIP1@28221|Deltaproteobacteria	213481|Bdellovibrionales	M	Peptidoglycan polymerase that is essential for cell wall elongation	mrdB	-	-	ko:K05837	-	-	-	-	ko00000,ko03036	-	-	-	FTSW_RODA_SPOVE
DYD3_k127_461295_16	264462.Bd1962	3.165e-14	86.0	COG3591@1|root,COG3591@2|Bacteria,1NP6U@1224|Proteobacteria,42ZKY@68525|delta/epsilon subdivisions,2MTXG@213481|Bdellovibrionales,2WUS6@28221|Deltaproteobacteria	213481|Bdellovibrionales	E	Belongs to the peptidase S1B family	-	-	-	-	-	-	-	-	-	-	-	-	Trypsin_2
DYD3_k127_461295_8	862908.BMS_2903	1.428e-52	189.0	COG1846@1|root,COG1846@2|Bacteria,1NJ8K@1224|Proteobacteria,43297@68525|delta/epsilon subdivisions,2MUFU@213481|Bdellovibrionales,2WYGN@28221|Deltaproteobacteria	213481|Bdellovibrionales	K	helix_turn_helix multiple antibiotic resistance protein	-	-	-	-	-	-	-	-	-	-	-	-	MarR_2
DYD3_k127_461295_10	1201290.M902_0508	5.495e-42	160.0	COG0607@1|root,COG0607@2|Bacteria	2|Bacteria	P	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS	-	-	-	-	-	-	-	-	-	-	-	-	Rhodanese
DYD3_k127_461295_6	1353529.M899_1258	1.591e-78	272.0	2B0QI@1|root,31T2J@2|Bacteria,1NHWW@1224|Proteobacteria	1224|Proteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_461295_9	1201288.M900_2301	1.298e-51	190.0	COG1196@1|root,COG1196@2|Bacteria,1N5CE@1224|Proteobacteria,42TKS@68525|delta/epsilon subdivisions,2WQPH@28221|Deltaproteobacteria	28221|Deltaproteobacteria	D	nuclear chromosome segregation	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_461295_1	862908.BMS_2899	4.119e-176	561.0	COG1078@1|root,COG1078@2|Bacteria,1R5S2@1224|Proteobacteria,42Q9G@68525|delta/epsilon subdivisions,2MSQ2@213481|Bdellovibrionales,2WMIK@28221|Deltaproteobacteria	213481|Bdellovibrionales	S	HD domain	-	-	-	ko:K06885	-	-	-	-	ko00000	-	-	-	HD
DYD3_k127_461295_15	1353529.M899_1255	3.649e-15	79.0	COG0695@1|root,COG0695@2|Bacteria	2|Bacteria	O	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins	-	-	-	ko:K06191	-	-	-	-	ko00000	-	-	-	GST_N_3,Glutaredoxin
DYD3_k127_461295_3	1353529.M899_1253	1.291e-134	462.0	28V4R@1|root,2ZH82@2|Bacteria,1QY1F@1224|Proteobacteria,43C8S@68525|delta/epsilon subdivisions,2MT9A@213481|Bdellovibrionales,2X7J4@28221|Deltaproteobacteria	213481|Bdellovibrionales	S	Putative Flp pilus-assembly TadE/G-like	-	-	-	-	-	-	-	-	-	-	-	-	Tad
DYD3_k127_461295_7	1201290.M902_0516	4.889e-67	231.0	COG0629@1|root,COG0629@2|Bacteria,1RCWT@1224|Proteobacteria,42TV9@68525|delta/epsilon subdivisions,2MT2P@213481|Bdellovibrionales,2WNAN@28221|Deltaproteobacteria	213481|Bdellovibrionales	L	Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism	ssb	-	-	ko:K03111	ko03030,ko03430,ko03440,map03030,map03430,map03440	-	-	-	ko00000,ko00001,ko03029,ko03032,ko03400	-	-	-	SSB
DYD3_k127_4614249_10	1201290.M902_1046	1.217e-43	172.0	COG1450@1|root,COG1450@2|Bacteria	2|Bacteria	NU	protein transport across the cell outer membrane	-	-	-	ko:K02453,ko:K12282	ko03070,ko05111,map03070,map05111	M00331	-	-	ko00000,ko00001,ko00002,ko02044	3.A.15	-	-	OmpA,Secretin,Secretin_N,T2SS-T3SS_pil_N
DYD3_k127_4614249_9	862908.BMS_2549	3.343e-59	219.0	COG0630@1|root,COG0630@2|Bacteria,1QUJ6@1224|Proteobacteria,43BJE@68525|delta/epsilon subdivisions	1224|Proteobacteria	NU	COG0630 Type IV secretory pathway, VirB11 components, and related ATPases involved in archaeal flagella biosynthesis	virB11	-	-	ko:K03196	ko03070,ko05120,map03070,map05120	M00333,M00564	-	-	ko00000,ko00001,ko00002,ko02044	3.A.7	-	-	T2SSE
DYD3_k127_4614249_0	926550.CLDAP_22510	9.358e-240	752.0	COG0488@1|root,COG0488@2|Bacteria	2|Bacteria	L	(ABC) transporter	yjjK	GO:0003674,GO:0003824,GO:0005488,GO:0006417,GO:0006448,GO:0008150,GO:0009889,GO:0009890,GO:0009892,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010608,GO:0010629,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0017148,GO:0019222,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032268,GO:0032269,GO:0034248,GO:0034249,GO:0043021,GO:0043022,GO:0044877,GO:0045900,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051246,GO:0051248,GO:0060255,GO:0065007,GO:0080090,GO:2000112,GO:2000113	3.6.3.25	ko:K06020	-	-	-	-	ko00000,ko01000	-	-	-	ABC_tran,ABC_tran_Xtn
DYD3_k127_4614249_3	1201290.M902_1041	2.332e-99	338.0	COG1092@1|root,COG1092@2|Bacteria,1MUGB@1224|Proteobacteria,42SFR@68525|delta/epsilon subdivisions,2WPY1@28221|Deltaproteobacteria	28221|Deltaproteobacteria	J	S-adenosylmethionine-dependent methyltransferase	-	-	2.1.1.191	ko:K06969	-	-	-	-	ko00000,ko01000,ko03009	-	-	-	Methyltrans_SAM
DYD3_k127_4614249_4	661478.OP10G_1780	1.259e-88	301.0	COG4586@1|root,COG4586@2|Bacteria	2|Bacteria	S	(ABC) transporter	-	-	-	ko:K01990	-	M00254	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	ABC_tran
DYD3_k127_4614249_14	1321778.HMPREF1982_00047	4.335e-14	82.0	COG4587@1|root,COG4587@2|Bacteria,1TSAN@1239|Firmicutes,24B28@186801|Clostridia	186801|Clostridia	S	ABC-2 family transporter protein	-	-	-	ko:K01992	-	M00254	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	ABC2_membrane_6
DYD3_k127_4614249_13	1184267.A11Q_2025	5.327e-30	130.0	COG3694@1|root,COG3694@2|Bacteria,1NAPK@1224|Proteobacteria,42X7R@68525|delta/epsilon subdivisions,2MT7Z@213481|Bdellovibrionales,2WSZA@28221|Deltaproteobacteria	213481|Bdellovibrionales	S	ABC-2 family transporter protein	-	-	-	ko:K01992	-	M00254	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	ABC2_membrane_6
DYD3_k127_4614249_12	1177154.Y5S_00421	1.632e-39	149.0	COG4323@1|root,COG4323@2|Bacteria,1N16T@1224|Proteobacteria,1S8V6@1236|Gammaproteobacteria,1XMAY@135619|Oceanospirillales	135619|Oceanospirillales	S	membrane	-	-	-	-	-	-	-	-	-	-	-	-	DUF962
DYD3_k127_4614249_6	862908.BMS_2558	5.011e-71	243.0	COG1143@1|root,COG1143@2|Bacteria,1MV90@1224|Proteobacteria,42R5T@68525|delta/epsilon subdivisions,2WMVQ@28221|Deltaproteobacteria	28221|Deltaproteobacteria	C	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient	nuoI	-	1.6.5.3	ko:K00338	ko00190,ko01100,map00190,map01100	M00144	R11945	RC00061	ko00000,ko00001,ko00002,ko01000	3.D.1	-	-	Fer4
DYD3_k127_4614249_1	1353529.M899_2552	5.276e-189	596.0	COG0649@1|root,COG0649@2|Bacteria,1MVIN@1224|Proteobacteria,42M9G@68525|delta/epsilon subdivisions,2MSRT@213481|Bdellovibrionales,2WIS7@28221|Deltaproteobacteria	213481|Bdellovibrionales	C	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient	nuoD	GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0016020,GO:0044424,GO:0044464,GO:0071944	1.6.5.3	ko:K00333,ko:K13378	ko00190,ko01100,map00190,map01100	M00144	R11945	RC00061	ko00000,ko00001,ko00002,ko01000	3.D.1	-	-	Complex1_30kDa,Complex1_49kDa
DYD3_k127_4614249_11	862908.BMS_2560	9.008e-40	154.0	COG0852@1|root,COG0852@2|Bacteria,1MX4B@1224|Proteobacteria,42NAR@68525|delta/epsilon subdivisions,2WQB1@28221|Deltaproteobacteria	28221|Deltaproteobacteria	C	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient	nuoC	-	1.6.5.3	ko:K00332	ko00190,ko01100,map00190,map01100	M00144	R11945	RC00061	ko00000,ko00001,ko00002,ko01000	3.D.1	-	-	Complex1_30kDa
DYD3_k127_4614249_2	1201288.M900_2426	1.566e-99	325.0	COG0377@1|root,COG0377@2|Bacteria,1MUI2@1224|Proteobacteria,42MDJ@68525|delta/epsilon subdivisions,2MT1A@213481|Bdellovibrionales,2WNNV@28221|Deltaproteobacteria	213481|Bdellovibrionales	C	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient	nuoB	-	1.6.5.3	ko:K00331	ko00190,ko01100,map00190,map01100	M00144	R11945	RC00061	ko00000,ko00001,ko00002,ko01000	3.D.1	-	-	Oxidored_q6
DYD3_k127_4614249_8	862908.BMS_2564	5.096e-63	237.0	COG0457@1|root,COG0457@2|Bacteria	862908.BMS_2564|-	S	peptidyl-tyrosine sulfation	-	-	-	ko:K09859	-	-	-	-	ko00000	-	-	-	-
DYD3_k127_4614249_5	862908.BMS_2565	8.076e-76	259.0	COG3417@1|root,COG3417@2|Bacteria,1RA6V@1224|Proteobacteria,42UKY@68525|delta/epsilon subdivisions,2MTF4@213481|Bdellovibrionales,2WR6E@28221|Deltaproteobacteria	213481|Bdellovibrionales	M	Collagen-binding surface adhesin SpaP (antigen I II family)	-	-	-	ko:K07337	-	-	-	-	ko00000	-	-	-	LpoB
DYD3_k127_465124_2	1353529.M899_0823	3.131e-37	147.0	COG0625@1|root,COG0625@2|Bacteria,1PHU8@1224|Proteobacteria,4328I@68525|delta/epsilon subdivisions,2WYA9@28221|Deltaproteobacteria	28221|Deltaproteobacteria	O	Glutathione S-transferase, N-terminal domain	-	-	-	-	-	-	-	-	-	-	-	-	GST_N_3
DYD3_k127_465124_1	796606.BMMGA3_12000	6.868e-76	260.0	COG0274@1|root,COG0274@2|Bacteria,1TPAJ@1239|Firmicutes,4HAAJ@91061|Bacilli,1ZCZ6@1386|Bacillus	91061|Bacilli	F	Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate	deoC	-	4.1.2.4	ko:K01619	ko00030,map00030	-	R01066	RC00436,RC00437	ko00000,ko00001,ko01000	-	-	-	DeoC
DYD3_k127_465124_0	289377.HL41_03635	2.195e-126	415.0	COG0162@1|root,COG0162@2|Bacteria,2GGUK@200940|Thermodesulfobacteria	200940|Thermodesulfobacteria	J	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)	tyrS	-	6.1.1.1	ko:K01866	ko00970,map00970	M00359,M00360	R02918	RC00055,RC00523	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029	-	-	-	S4,tRNA-synt_1b
DYD3_k127_4681105_0	1201290.M902_0225	6.188e-28	130.0	COG2911@1|root,COG3209@1|root,COG3210@1|root,COG2911@2|Bacteria,COG3209@2|Bacteria,COG3210@2|Bacteria,1NED3@1224|Proteobacteria,42WDX@68525|delta/epsilon subdivisions,2WRDH@28221|Deltaproteobacteria	28221|Deltaproteobacteria	U	cell wall surface anchor family protein	-	-	-	-	-	-	-	-	-	-	-	-	Peptidase_S74
DYD3_k127_4690748_2	1121929.KB898666_gene2614	9.125e-66	229.0	COG4430@1|root,COG4430@2|Bacteria,1UYP9@1239|Firmicutes,4HDZD@91061|Bacilli	91061|Bacilli	S	protein conserved in bacteria	ydeI	-	-	-	-	-	-	-	-	-	-	-	DUF1801,OmdA
DYD3_k127_4690748_4	1384054.N790_07320	6.771e-51	194.0	COG0583@1|root,COG0583@2|Bacteria,1MW16@1224|Proteobacteria,1RPNX@1236|Gammaproteobacteria,1X60Z@135614|Xanthomonadales	135614|Xanthomonadales	K	transcriptional regulator	-	-	-	-	-	-	-	-	-	-	-	-	HTH_1,LysR_substrate
DYD3_k127_4690748_3	349521.HCH_05764	7.975e-62	220.0	COG1028@1|root,COG1028@2|Bacteria,1RA3U@1224|Proteobacteria,1RREY@1236|Gammaproteobacteria,1XKE7@135619|Oceanospirillales	135619|Oceanospirillales	IQ	Enoyl-(Acyl carrier protein) reductase	-	-	-	-	-	-	-	-	-	-	-	-	adh_short_C2
DYD3_k127_4690748_5	285535.JOEY01000061_gene8665	6.865e-24	105.0	COG0494@1|root,COG0494@2|Bacteria,2I56M@201174|Actinobacteria	201174|Actinobacteria	L	NUDIX domain	-	-	-	-	-	-	-	-	-	-	-	-	NUDIX
DYD3_k127_4690748_1	1278073.MYSTI_02623	3.343e-71	261.0	28M2S@1|root,2ZAH5@2|Bacteria,1MVH5@1224|Proteobacteria,437K1@68525|delta/epsilon subdivisions,2X2U4@28221|Deltaproteobacteria,2YWMU@29|Myxococcales	28221|Deltaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_4690748_0	1122134.KB893650_gene670	1.717e-85	302.0	28M2S@1|root,2ZAH5@2|Bacteria,1MVH5@1224|Proteobacteria,1RZT6@1236|Gammaproteobacteria	1236|Gammaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_4690748_6	1100721.ALKO01000017_gene1745	4.193e-10	64.0	COG3310@1|root,COG3310@2|Bacteria,1RDE0@1224|Proteobacteria,2VQ9D@28216|Betaproteobacteria,4AA25@80864|Comamonadaceae	28216|Betaproteobacteria	S	Protein of unknown function (DUF1415)	-	-	-	ko:K09941	-	-	-	-	ko00000	-	-	-	DUF1415
DYD3_k127_4706682_6	1201290.M902_1811	1.897e-34	142.0	COG3093@1|root,COG3093@2|Bacteria,1NY3A@1224|Proteobacteria,430HJ@68525|delta/epsilon subdivisions,2MU3K@213481|Bdellovibrionales,2WW4H@28221|Deltaproteobacteria	213481|Bdellovibrionales	K	Domain of unknown function (DUF4423)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4423,HTH_3
DYD3_k127_4706682_2	204536.SULAZ_0394	8.915e-97	331.0	COG0019@1|root,COG0019@2|Bacteria,2G3J8@200783|Aquificae	200783|Aquificae	E	Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine	lysA	-	4.1.1.20	ko:K01586	ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00300,map01100,map01110,map01120,map01130,map01230	M00016,M00525,M00526,M00527	R00451	RC00299	ko00000,ko00001,ko00002,ko01000	-	-	-	Orn_Arg_deC_N,Orn_DAP_Arg_deC
DYD3_k127_4706682_5	1536775.H70737_22980	2.616e-58	208.0	COG0461@1|root,COG0461@2|Bacteria,1V1BZ@1239|Firmicutes,4HFV7@91061|Bacilli,26R34@186822|Paenibacillaceae	91061|Bacilli	F	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)	pyrE	-	2.4.2.10	ko:K00762	ko00240,ko01100,map00240,map01100	M00051	R01870	RC00611	ko00000,ko00001,ko00002,ko01000	-	-	iYO844.BSU15560	Pribosyltran
DYD3_k127_4706682_3	1284352.AOIG01000006_gene2660	6.678e-71	246.0	COG0284@1|root,COG0284@2|Bacteria,1TPPH@1239|Firmicutes,4HAJ2@91061|Bacilli,26QPF@186822|Paenibacillaceae	91061|Bacilli	F	Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP)	pyrF	GO:0003674,GO:0003824,GO:0004590,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006206,GO:0006207,GO:0006220,GO:0006221,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009112,GO:0009117,GO:0009165,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0016829,GO:0016830,GO:0016831,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019856,GO:0034641,GO:0034654,GO:0042802,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046112,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576	4.1.1.23	ko:K01591	ko00240,ko01100,map00240,map01100	M00051	R00965	RC00409	ko00000,ko00001,ko00002,ko01000	-	-	-	OMPdecase
DYD3_k127_4706682_0	1121121.KB894296_gene709	0.0	1439.0	COG0458@1|root,COG0458@2|Bacteria,1TPID@1239|Firmicutes,4HAEY@91061|Bacilli,26QSY@186822|Paenibacillaceae	91061|Bacilli	F	Belongs to the CarB family	carB	GO:0000050,GO:0003674,GO:0003824,GO:0004087,GO:0004088,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016874,GO:0016879,GO:0016884,GO:0019627,GO:0019752,GO:0034641,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:0071941,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607	6.3.5.5	ko:K01955	ko00240,ko00250,ko01100,map00240,map00250,map01100	M00051	R00256,R00575,R01395,R10948,R10949	RC00002,RC00010,RC00043,RC02750,RC02798,RC03314	ko00000,ko00001,ko00002,ko01000	-	-	-	CPSase_L_D2,CPSase_L_D3,MGS
DYD3_k127_4706682_1	621372.ACIH01000172_gene2975	1.073e-131	428.0	COG0505@1|root,COG0505@2|Bacteria,1TQ8N@1239|Firmicutes,4H9Z0@91061|Bacilli,26R3K@186822|Paenibacillaceae	91061|Bacilli	F	Belongs to the CarA family	carA	GO:0000050,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005951,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0019627,GO:0019752,GO:0032991,GO:0034641,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0071704,GO:0071941,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607,GO:1902494	6.3.5.5	ko:K01956	ko00240,ko00250,ko01100,map00240,map00250,map01100	M00051	R00256,R00575,R01395,R10948,R10949	RC00002,RC00010,RC00043,RC02750,RC02798,RC03314	ko00000,ko00001,ko00002,ko01000	-	-	iYO844.BSU15510	CPSase_sm_chain,GATase
DYD3_k127_4706682_4	1211819.CALK01000011_gene2927	1.137e-60	215.0	COG0540@1|root,COG0540@2|Bacteria,1TQ96@1239|Firmicutes,3VPNS@526524|Erysipelotrichia	526524|Erysipelotrichia	F	Belongs to the ATCase OTCase family	pyrB	-	-	-	-	-	-	-	-	-	-	-	OTCace,OTCace_N
DYD3_k127_4745510_5	557598.LHK_01835	5.421e-15	75.0	COG0783@1|root,COG0783@2|Bacteria,1RAC5@1224|Proteobacteria,2VM4X@28216|Betaproteobacteria	28216|Betaproteobacteria	P	Belongs to the Dps family	dps	-	-	ko:K04047	-	-	-	-	ko00000,ko03036	-	-	-	Ferritin
DYD3_k127_4745510_4	1082931.KKY_3451	2.891e-49	180.0	COG3791@1|root,COG3791@2|Bacteria,1N1CH@1224|Proteobacteria,2UE7N@28211|Alphaproteobacteria,3N8U6@45401|Hyphomicrobiaceae	28211|Alphaproteobacteria	S	Glutathione-dependent formaldehyde-activating enzyme	-	-	-	-	-	-	-	-	-	-	-	-	GFA
DYD3_k127_4745510_3	264462.Bd3674	9.912e-57	203.0	COG3832@1|root,COG3832@2|Bacteria,1RDMX@1224|Proteobacteria,431W2@68525|delta/epsilon subdivisions,2MU4S@213481|Bdellovibrionales,2WWR4@28221|Deltaproteobacteria	213481|Bdellovibrionales	S	Polyketide cyclase / dehydrase and lipid transport	-	-	-	-	-	-	-	-	-	-	-	-	Polyketide_cyc2
DYD3_k127_4745510_1	264462.Bd3675	7.958e-95	314.0	COG1309@1|root,COG1309@2|Bacteria,1RGCX@1224|Proteobacteria	1224|Proteobacteria	K	tetR family	-	-	-	ko:K16137	-	-	-	-	ko00000,ko03000	-	-	-	TetR_C_13,TetR_N
DYD3_k127_4745510_2	1123499.KB908021_gene924	5.597e-66	229.0	COG1671@1|root,COG1671@2|Bacteria,1RCZA@1224|Proteobacteria,2VRAZ@28216|Betaproteobacteria,2KRE7@206351|Neisseriales	206351|Neisseriales	S	Uncharacterized BCR, YaiI/YqxD family COG1671	-	-	-	ko:K09768	-	-	-	-	ko00000	-	-	-	DUF188
DYD3_k127_4745510_0	264462.Bd2241	1.261e-195	626.0	COG0069@1|root,COG0069@2|Bacteria,1MU7B@1224|Proteobacteria,42MF7@68525|delta/epsilon subdivisions,2MSUV@213481|Bdellovibrionales,2WJJR@28221|Deltaproteobacteria	213481|Bdellovibrionales	C	Belongs to the glutamate synthase family	-	-	2.1.1.21	ko:K22083	ko00680,ko01120,map00680,map01120	-	R01586	RC00554	ko00000,ko00001,ko01000	-	-	-	Fer4,Fer4_10,Fer4_7,Fer4_9,GXGXG,Glu_syn_central,Glu_synthase
DYD3_k127_4769208_5	717605.Theco_2914	5.779e-07	57.0	COG1285@1|root,COG1285@2|Bacteria,1V409@1239|Firmicutes,4HC2G@91061|Bacilli,26R4Z@186822|Paenibacillaceae	91061|Bacilli	S	MgtC SapB transporter	mgtC3	-	-	ko:K07507	-	-	-	-	ko00000,ko02000	9.B.20	-	-	MgtC
DYD3_k127_4769208_4	47763.JNZA01000040_gene24	5.516e-07	61.0	COG3210@1|root,COG3210@2|Bacteria,2I2VF@201174|Actinobacteria	201174|Actinobacteria	U	domain, Protein	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_4769208_1	264462.Bd1121	2.88e-73	258.0	COG0429@1|root,COG0429@2|Bacteria,1MWV1@1224|Proteobacteria,42N26@68525|delta/epsilon subdivisions,2MTTW@213481|Bdellovibrionales,2WK9Q@28221|Deltaproteobacteria	213481|Bdellovibrionales	S	PFAM Alpha beta hydrolase	-	-	-	ko:K07019	-	-	-	-	ko00000	-	-	-	Abhydrolase_1,Hydrolase_4
DYD3_k127_4769208_0	667632.KB890165_gene2577	1.956e-74	264.0	COG3287@1|root,COG3287@2|Bacteria,1MVUZ@1224|Proteobacteria,2VJQD@28216|Betaproteobacteria,1KBPK@119060|Burkholderiaceae	28216|Betaproteobacteria	S	FIST_C	-	-	-	-	-	-	-	-	-	-	-	-	FIST,FIST_C
DYD3_k127_4769208_2	1201290.M902_0585	3.397e-52	200.0	COG4191@1|root,COG4191@2|Bacteria,1RCM9@1224|Proteobacteria,42NFY@68525|delta/epsilon subdivisions,2MUNW@213481|Bdellovibrionales,2WJKV@28221|Deltaproteobacteria	213481|Bdellovibrionales	T	PFAM ATP-binding region, ATPase domain protein	-	-	-	-	-	-	-	-	-	-	-	-	CHASE5,HATPase_c,HisKA
DYD3_k127_4769208_3	765869.BDW_08645	3.236e-20	102.0	COG2206@1|root,COG2206@2|Bacteria,1MW7F@1224|Proteobacteria,42PGR@68525|delta/epsilon subdivisions,2MT2U@213481|Bdellovibrionales,2X5DV@28221|Deltaproteobacteria	213481|Bdellovibrionales	T	HD domain	-	-	-	-	-	-	-	-	-	-	-	-	HD,HD_5
DYD3_k127_47894_5	585.DR95_1434	3.461e-79	277.0	COG2265@1|root,COG2265@2|Bacteria,1N8DN@1224|Proteobacteria,1RMX4@1236|Gammaproteobacteria,3Z1Z2@583|Proteus	1236|Gammaproteobacteria	J	Catalyzes the formation of 5-methyl-uridine at position 747 (m5U747) in 23S rRNA	rlmC	GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016436,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0070475,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360	2.1.1.189	ko:K03212	-	-	-	-	ko00000,ko01000,ko03009	-	-	-	tRNA_U5-meth_tr
DYD3_k127_47894_8	1201290.M902_1794	6.87e-57	207.0	COG0744@1|root,COG0744@2|Bacteria,1RDAQ@1224|Proteobacteria,42QW6@68525|delta/epsilon subdivisions,2MT63@213481|Bdellovibrionales,2WPZA@28221|Deltaproteobacteria	213481|Bdellovibrionales	M	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors	mtgA	-	2.4.1.129	ko:K03814	ko00550,map00550	-	-	-	ko00000,ko00001,ko01000,ko01003,ko01011	-	GT51	-	Transgly
DYD3_k127_47894_9	1380380.JIAX01000014_gene2700	6.684e-55	196.0	COG0219@1|root,COG0219@2|Bacteria,1RCY4@1224|Proteobacteria,2U78W@28211|Alphaproteobacteria	28211|Alphaproteobacteria	J	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide	trmL	-	2.1.1.207	ko:K03216	-	-	-	-	ko00000,ko01000,ko03016	-	-	-	SpoU_methylase
DYD3_k127_47894_2	1353529.M899_1319	8.906e-165	534.0	COG0260@1|root,COG0260@2|Bacteria,1MUF9@1224|Proteobacteria,42M2G@68525|delta/epsilon subdivisions,2MSME@213481|Bdellovibrionales,2WJ80@28221|Deltaproteobacteria	213481|Bdellovibrionales	E	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides	pepA	-	3.4.11.1	ko:K01255	ko00480,ko01100,map00480,map01100	-	R00899,R04951	RC00096,RC00141	ko00000,ko00001,ko01000,ko01002	-	-	-	Peptidase_M17,Peptidase_M17_N
DYD3_k127_47894_7	862908.BMS_2967	5.798e-76	269.0	COG0795@1|root,COG0795@2|Bacteria,1MUF2@1224|Proteobacteria,42NYD@68525|delta/epsilon subdivisions,2MT53@213481|Bdellovibrionales,2WKHT@28221|Deltaproteobacteria	213481|Bdellovibrionales	S	PFAM permease YjgP YjgQ family protein	lptF	-	-	ko:K07091	ko02010,map02010	M00320	-	-	ko00000,ko00001,ko00002,ko02000	1.B.42.1	-	-	YjgP_YjgQ
DYD3_k127_47894_11	1353529.M899_1317	8.973e-45	177.0	COG1426@1|root,COG1426@2|Bacteria,1NIQS@1224|Proteobacteria,43EXB@68525|delta/epsilon subdivisions,2MTCZ@213481|Bdellovibrionales,2X2G6@28221|Deltaproteobacteria	213481|Bdellovibrionales	S	Helix-turn-helix domain	-	-	-	ko:K15539	-	-	-	-	ko00000	-	-	-	HTH_25
DYD3_k127_47894_10	862908.BMS_2965	5.698e-51	191.0	COG3063@1|root,COG3063@2|Bacteria,1RK88@1224|Proteobacteria,42SIP@68525|delta/epsilon subdivisions,2MT7E@213481|Bdellovibrionales,2WPT7@28221|Deltaproteobacteria	213481|Bdellovibrionales	NU	TPR repeat	tgl	-	-	-	-	-	-	-	-	-	-	-	TPR_1,TPR_11,TPR_16,TPR_2,TPR_6,TPR_8
DYD3_k127_47894_6	1201288.M900_0424	3.512e-79	277.0	COG2265@1|root,COG2265@2|Bacteria,1MV3A@1224|Proteobacteria,42ME9@68525|delta/epsilon subdivisions,2MT6C@213481|Bdellovibrionales,2WKF0@28221|Deltaproteobacteria	213481|Bdellovibrionales	J	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family	rumA	-	2.1.1.190	ko:K03215	-	-	-	-	ko00000,ko01000,ko03009	-	-	-	TRAM,tRNA_U5-meth_tr
DYD3_k127_47894_1	862908.BMS_2962	3.225e-182	586.0	COG0168@1|root,COG0168@2|Bacteria,1N412@1224|Proteobacteria,42MBI@68525|delta/epsilon subdivisions,2WIZ9@28221|Deltaproteobacteria	28221|Deltaproteobacteria	P	PFAM Cation transporter	ktrB	-	-	ko:K03498	-	-	-	-	ko00000,ko02000	2.A.38.1,2.A.38.4	-	-	TrkH
DYD3_k127_47894_4	1201290.M902_1937	3.905e-117	379.0	COG0569@1|root,COG0569@2|Bacteria,1R7KM@1224|Proteobacteria,42PJH@68525|delta/epsilon subdivisions,2WMZT@28221|Deltaproteobacteria	28221|Deltaproteobacteria	P	PFAM TrkA-N domain protein	ktrA	-	-	ko:K03499	-	-	-	-	ko00000,ko02000	2.A.38.1,2.A.38.4	-	-	TrkA_C,TrkA_N
DYD3_k127_47894_3	862908.BMS_2960	6.312e-146	471.0	COG5000@1|root,COG5000@2|Bacteria	2|Bacteria	T	phosphorelay sensor kinase activity	-	-	4.6.1.1	ko:K01768	ko00230,ko02025,ko04113,ko04213,map00230,map02025,map04113,map04213	M00695	R00089,R00434	RC00295	ko00000,ko00001,ko00002,ko01000	-	-	-	HAMP,HATPase_c,HD,HD_5,PAS,PAS_9,Response_reg,SpoIIE
DYD3_k127_47894_13	525257.HMPREF0204_13369	8.44e-17	91.0	COG0251@1|root,COG0251@2|Bacteria,4NV61@976|Bacteroidetes,1I5YT@117743|Flavobacteriia,3ZS5T@59732|Chryseobacterium	976|Bacteroidetes	J	Endoribonuclease L-PSP	-	-	-	-	-	-	-	-	-	-	-	-	Ribonuc_L-PSP
DYD3_k127_47894_14	1250232.JQNJ01000001_gene377	3.363e-14	83.0	COG0662@1|root,COG0662@2|Bacteria,4NPVZ@976|Bacteroidetes,1I6PU@117743|Flavobacteriia	976|Bacteroidetes	G	Cupin	-	-	-	-	-	-	-	-	-	-	-	-	Cupin_2
DYD3_k127_47894_12	28229.ND2E_2830	1.077e-23	108.0	COG0664@1|root,COG0664@2|Bacteria,1RIU1@1224|Proteobacteria,1S6NE@1236|Gammaproteobacteria	1236|Gammaproteobacteria	T	Catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases	-	-	-	-	-	-	-	-	-	-	-	-	cNMP_binding
DYD3_k127_47894_0	862908.BMS_2959	3.331e-184	583.0	COG0481@1|root,COG0481@2|Bacteria,1MVZA@1224|Proteobacteria,42M3D@68525|delta/epsilon subdivisions,2MSQQ@213481|Bdellovibrionales,2WJEA@28221|Deltaproteobacteria	213481|Bdellovibrionales	J	Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner	lepA	-	-	ko:K03596	ko05134,map05134	-	-	-	ko00000,ko00001	-	-	-	EFG_C,EFG_II,GTP_EFTU,GTP_EFTU_D2,LepA_C
DYD3_k127_4827265_3	1201288.M900_2248	4.49e-29	117.0	COG0495@1|root,COG0495@2|Bacteria,1MV47@1224|Proteobacteria,42MRQ@68525|delta/epsilon subdivisions,2MSMW@213481|Bdellovibrionales,2WJ3E@28221|Deltaproteobacteria	213481|Bdellovibrionales	J	Belongs to the class-I aminoacyl-tRNA synthetase family	leuS	-	6.1.1.4	ko:K01869	ko00970,map00970	M00359,M00360	R03657	RC00055,RC00523	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029	-	-	-	Anticodon_1,tRNA-synt_1,tRNA-synt_1_2
DYD3_k127_4827265_1	765869.BDW_13520	1.11e-99	344.0	COG0840@1|root,COG0840@2|Bacteria,1MU9B@1224|Proteobacteria,42M22@68525|delta/epsilon subdivisions,2WM8F@28221|Deltaproteobacteria	28221|Deltaproteobacteria	NT	Chemotaxis sensory transducer	mcp64H-1	-	-	ko:K03406	ko02020,ko02030,map02020,map02030	-	-	-	ko00000,ko00001,ko02035	-	-	-	4HB_MCP_1,HAMP,MCPsignal,PAS_4,dCache_1
DYD3_k127_4827265_2	862908.BMS_2872	2.237e-60	216.0	COG0170@1|root,COG0170@2|Bacteria,1NAJ2@1224|Proteobacteria,42XJ5@68525|delta/epsilon subdivisions,2MT5G@213481|Bdellovibrionales,2WSX5@28221|Deltaproteobacteria	213481|Bdellovibrionales	I	Dolichol kinase	-	-	-	-	-	-	-	-	-	-	-	-	CTP_transf_1
DYD3_k127_4827265_0	862908.BMS_2873	1.529e-129	420.0	COG0455@1|root,COG0455@2|Bacteria,1R8IW@1224|Proteobacteria,42R3H@68525|delta/epsilon subdivisions,2MTYJ@213481|Bdellovibrionales,2WMNY@28221|Deltaproteobacteria	213481|Bdellovibrionales	D	CobQ CobB MinD ParA nucleotide binding	-	-	-	ko:K04562	-	-	-	-	ko00000,ko02035	-	-	-	AAA_31,CbiA,HTH_25,ParA
DYD3_k127_4858320_1	1201288.M900_0434	4.665e-180	572.0	COG1004@1|root,COG1004@2|Bacteria,1MW5U@1224|Proteobacteria,42MDV@68525|delta/epsilon subdivisions,2MTS7@213481|Bdellovibrionales,2WJ3T@28221|Deltaproteobacteria	213481|Bdellovibrionales	M	Belongs to the UDP-glucose GDP-mannose dehydrogenase family	ugd	-	1.1.1.22	ko:K00012	ko00040,ko00053,ko00520,ko01100,map00040,map00053,map00520,map01100	M00014,M00129,M00361,M00362	R00286	RC00291	ko00000,ko00001,ko00002,ko01000	-	-	-	UDPG_MGDP_dh,UDPG_MGDP_dh_C,UDPG_MGDP_dh_N
DYD3_k127_4858320_5	1184267.A11Q_539	3.509e-34	139.0	COG1943@1|root,COG1943@2|Bacteria,1MX0E@1224|Proteobacteria,42RAB@68525|delta/epsilon subdivisions,2MT4Q@213481|Bdellovibrionales,2X5MB@28221|Deltaproteobacteria	213481|Bdellovibrionales	L	Transposase IS200 like	-	-	-	ko:K07491	-	-	-	-	ko00000	-	-	-	Y1_Tnp
DYD3_k127_4858320_0	404589.Anae109_2419	4.601e-187	602.0	COG1960@1|root,COG1960@2|Bacteria,1MUDR@1224|Proteobacteria,42PMK@68525|delta/epsilon subdivisions,2X5G7@28221|Deltaproteobacteria,2Z35F@29|Myxococcales	28221|Deltaproteobacteria	C	Acyl-CoA dehydrogenase, N-terminal domain	-	-	-	-	-	-	-	-	-	-	-	-	Acyl-CoA_dh_1,Acyl-CoA_dh_M,Acyl-CoA_dh_N
DYD3_k127_4858320_4	862908.BMS_0329	4.64e-42	169.0	COG3307@1|root,COG3307@2|Bacteria,1NGAP@1224|Proteobacteria,42XF9@68525|delta/epsilon subdivisions,2MTE8@213481|Bdellovibrionales,2WSRN@28221|Deltaproteobacteria	213481|Bdellovibrionales	M	O-antigen ligase like membrane protein	-	-	-	ko:K02847	ko00540,ko01100,map00540,map01100	M00080	-	-	ko00000,ko00001,ko00002,ko01000,ko01005,ko02000	9.B.67.4,9.B.67.5	-	-	Wzy_C
DYD3_k127_4858320_3	746697.Aeqsu_2256	5.738e-61	226.0	COG2148@1|root,COG2148@2|Bacteria,4NFIA@976|Bacteroidetes,1HXE1@117743|Flavobacteriia	976|Bacteroidetes	M	sugar transferase	-	-	-	-	-	-	-	-	-	-	-	-	Bac_transf,CoA_binding_3
DYD3_k127_4858320_2	984262.SGRA_2434	7.606e-94	320.0	COG0472@1|root,COG0472@2|Bacteria,4NGKM@976|Bacteroidetes,1INPS@117747|Sphingobacteriia	976|Bacteroidetes	M	Glycosyl transferase, family 4	mraY2	-	-	-	-	-	-	-	-	-	-	-	Glycos_transf_4
DYD3_k127_4858320_6	315730.BcerKBAB4_5067	6.609e-18	86.0	COG0438@1|root,COG0438@2|Bacteria,1UBE1@1239|Firmicutes,4HCY8@91061|Bacilli,1ZHMJ@1386|Bacillus	91061|Bacilli	M	Glycosyl transferase 4-like	-	-	-	ko:K13004	-	-	-	-	ko00000,ko01000,ko01003,ko01005	-	GT4	-	Glyco_trans_4_2,Glycos_transf_1
DYD3_k127_487135_26	1178537.BA1_14567	3.157e-27	119.0	COG4221@1|root,COG4221@2|Bacteria,1V9C1@1239|Firmicutes,4ISDS@91061|Bacilli,1ZSI6@1386|Bacillus	91061|Bacilli	S	Enoyl-(Acyl carrier protein) reductase	-	-	-	-	-	-	-	-	-	-	-	-	adh_short
DYD3_k127_487135_3	862908.BMS_3193	1.645e-202	642.0	COG1418@1|root,COG3064@1|root,COG1418@2|Bacteria,COG3064@2|Bacteria,1P7YA@1224|Proteobacteria,42KZ8@68525|delta/epsilon subdivisions,2MSMI@213481|Bdellovibrionales,2WJG1@28221|Deltaproteobacteria	213481|Bdellovibrionales	M	Endoribonuclease that initiates mRNA decay	rny	-	-	ko:K18682	ko03018,map03018	-	-	-	ko00000,ko00001,ko01000,ko03019	-	-	-	DUF3552,HD,KH_1
DYD3_k127_487135_30	1201288.M900_2606	8.5e-19	93.0	COG0212@1|root,COG0212@2|Bacteria,1MZG0@1224|Proteobacteria,42U47@68525|delta/epsilon subdivisions,2MT6X@213481|Bdellovibrionales,2WP68@28221|Deltaproteobacteria	213481|Bdellovibrionales	H	5-formyltetrahydrofolate cyclo-ligase family	-	-	6.3.3.2	ko:K01934	ko00670,ko01100,map00670,map01100	-	R02301	RC00183	ko00000,ko00001,ko01000	-	-	-	5-FTHF_cyc-lig
DYD3_k127_487135_8	1201288.M900_2608	6.7e-117	387.0	COG0552@1|root,COG0552@2|Bacteria,1MUDU@1224|Proteobacteria,42N3Z@68525|delta/epsilon subdivisions,2MSWG@213481|Bdellovibrionales,2WIPM@28221|Deltaproteobacteria	213481|Bdellovibrionales	U	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC). Interaction with SRP-RNC leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components	ftsY	-	-	ko:K03110	ko02024,ko03060,ko03070,map02024,map03060,map03070	M00335	-	-	ko00000,ko00001,ko00002,ko02044	3.A.5.1,3.A.5.2,3.A.5.7	-	-	SRP54,SRP54_N
DYD3_k127_487135_39	1324957.K933_06753	2.471e-08	63.0	COG0494@1|root,arCOG01072@2157|Archaea,2XWJS@28890|Euryarchaeota,23VF0@183963|Halobacteria	183963|Halobacteria	L	COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes	-	-	-	-	-	-	-	-	-	-	-	-	NUDIX
DYD3_k127_487135_10	862908.BMS_3197	1.425e-103	345.0	COG2269@1|root,COG2269@2|Bacteria,1MU97@1224|Proteobacteria,42MAN@68525|delta/epsilon subdivisions,2MT4Y@213481|Bdellovibrionales,2WJBB@28221|Deltaproteobacteria	213481|Bdellovibrionales	J	PFAM tRNA synthetase, class II (D, K and N)	genX	-	-	ko:K04568	-	-	-	-	ko00000,ko01000,ko03012	-	-	-	tRNA-synt_2
DYD3_k127_487135_1	1353529.M899_3297	4.463e-225	704.0	COG0621@1|root,COG0621@2|Bacteria,1MU7N@1224|Proteobacteria,42MRJ@68525|delta/epsilon subdivisions,2MSQD@213481|Bdellovibrionales,2WITA@28221|Deltaproteobacteria	213481|Bdellovibrionales	J	Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12	rimO	-	2.8.4.4	ko:K14441	-	-	R10652	RC00003,RC03217	ko00000,ko01000,ko03009	-	-	-	Radical_SAM,TRAM,UPF0004
DYD3_k127_487135_17	641524.ADICYQ_4461	7.116e-71	247.0	COG0744@1|root,COG0744@2|Bacteria,4NF90@976|Bacteroidetes,47MHF@768503|Cytophagia	976|Bacteroidetes	M	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors	mtgA	-	2.4.1.129	ko:K03814	ko00550,map00550	-	-	-	ko00000,ko00001,ko01000,ko01003,ko01011	-	GT51	-	Transgly
DYD3_k127_487135_2	765869.BDW_01465	2.447e-221	730.0	COG3210@1|root,COG5434@1|root,COG3210@2|Bacteria,COG5434@2|Bacteria,1MXIP@1224|Proteobacteria,42NZJ@68525|delta/epsilon subdivisions	1224|Proteobacteria	U	TIGRFAM filamentous haemagglutinin family outer membrane protein	hxuA	GO:0005575,GO:0005576	-	-	-	-	-	-	-	-	-	-	DUF3739,Glug,Haemagg_act
DYD3_k127_487135_0	862908.BMS_3169	3.152e-234	734.0	COG0029@1|root,COG0029@2|Bacteria,1RBQW@1224|Proteobacteria,43BKD@68525|delta/epsilon subdivisions,2MSQC@213481|Bdellovibrionales,2WJNK@28221|Deltaproteobacteria	213481|Bdellovibrionales	H	Catalyzes the oxidation of L-aspartate to iminoaspartate	nadB	-	1.4.3.16	ko:K00278	ko00250,ko00760,ko01100,map00250,map00760,map01100	M00115	R00357,R00481	RC00006,RC02566	ko00000,ko00001,ko00002,ko01000	-	-	-	FAD_binding_2,Succ_DH_flav_C
DYD3_k127_487135_13	1353529.M899_3269	2.514e-89	303.0	COG0157@1|root,COG0157@2|Bacteria,1MW0C@1224|Proteobacteria,42MY7@68525|delta/epsilon subdivisions,2MT1P@213481|Bdellovibrionales,2WJH7@28221|Deltaproteobacteria	213481|Bdellovibrionales	H	Belongs to the NadC ModD family	nadC	-	2.4.2.19	ko:K00767	ko00760,ko01100,map00760,map01100	M00115	R03348	RC02877	ko00000,ko00001,ko00002,ko01000	-	-	iAF987.Gmet_1988	QRPTase_C,QRPTase_N
DYD3_k127_487135_29	1201288.M900_2553	6.801e-19	99.0	COG0658@1|root,COG0658@2|Bacteria	2|Bacteria	S	establishment of competence for transformation	comEC	-	-	ko:K02238	-	M00429	-	-	ko00000,ko00002,ko02044	3.A.11.1,3.A.11.2	-	-	Competence,DUF4131,Lactamase_B
DYD3_k127_487135_5	1201288.M900_0311	3.462e-173	552.0	COG0544@1|root,COG0544@2|Bacteria,1MUJP@1224|Proteobacteria,42MBB@68525|delta/epsilon subdivisions,2MSXK@213481|Bdellovibrionales,2WIU1@28221|Deltaproteobacteria	213481|Bdellovibrionales	D	Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase	tig	GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464	-	ko:K03545	-	-	-	-	ko00000	-	-	-	FKBP_C,Trigger_C,Trigger_N
DYD3_k127_487135_15	862908.BMS_0240	5.921e-76	262.0	COG0101@1|root,COG0101@2|Bacteria,1MUYI@1224|Proteobacteria,42RTC@68525|delta/epsilon subdivisions,2MT2Y@213481|Bdellovibrionales,2WNQ6@28221|Deltaproteobacteria	213481|Bdellovibrionales	J	Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs	truA	-	5.4.99.12	ko:K06173	-	-	-	-	ko00000,ko01000,ko03016	-	-	-	PseudoU_synth_1
DYD3_k127_487135_14	862908.BMS_0238	1.215e-80	276.0	COG1183@1|root,COG1183@2|Bacteria,1MWD9@1224|Proteobacteria,42QV4@68525|delta/epsilon subdivisions,2MT1R@213481|Bdellovibrionales,2WMR6@28221|Deltaproteobacteria	213481|Bdellovibrionales	I	Belongs to the CDP-alcohol phosphatidyltransferase class-I family	pssA	-	2.7.8.8	ko:K17103	ko00260,ko00564,ko01100,ko01110,map00260,map00564,map01100,map01110	M00093	R01800	RC00002,RC00017,RC02795	ko00000,ko00001,ko00002,ko01000	-	-	-	CDP-OH_P_transf
DYD3_k127_487135_31	1353529.M899_1532	7.239e-16	86.0	COG0688@1|root,COG0688@2|Bacteria	2|Bacteria	I	phosphatidylethanolamine metabolic process	psd	-	4.1.1.65	ko:K01613	ko00564,ko01100,ko01110,map00564,map01100,map01110	M00093	R02055	RC00299	ko00000,ko00001,ko00002,ko01000	-	-	-	PS_Dcarbxylase
DYD3_k127_487135_22	862908.BMS_0236	7.685e-37	146.0	COG1214@1|root,COG1214@2|Bacteria	2|Bacteria	O	tRNA threonylcarbamoyladenosine modification	yeaZ	GO:0002949,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006508,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008233,GO:0008237,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016787,GO:0019538,GO:0034470,GO:0034641,GO:0034660,GO:0042802,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0070011,GO:0070525,GO:0071704,GO:0090304,GO:0140096,GO:1901360,GO:1901564	2.3.1.234	ko:K01409,ko:K14742	-	-	R10648	RC00070,RC00416	ko00000,ko01000,ko03016	-	-	-	Peptidase_M22
DYD3_k127_487135_6	1201290.M902_0241	5.581e-149	487.0	COG0750@1|root,COG0750@2|Bacteria,1MU91@1224|Proteobacteria,42NJ0@68525|delta/epsilon subdivisions,2MSVZ@213481|Bdellovibrionales,2WJ7A@28221|Deltaproteobacteria	213481|Bdellovibrionales	M	SMART PDZ DHR GLGF domain protein	rseP	-	-	ko:K11749	ko02024,ko04112,map02024,map04112	-	-	-	ko00000,ko00001,ko01000,ko01002	-	-	-	PDZ,PDZ_2,Peptidase_M50
DYD3_k127_487135_18	862908.BMS_0234	1.953e-61	221.0	COG4589@1|root,COG4589@2|Bacteria,1R34Q@1224|Proteobacteria,42V84@68525|delta/epsilon subdivisions,2MT7C@213481|Bdellovibrionales,2WSFZ@28221|Deltaproteobacteria	213481|Bdellovibrionales	S	Phosphatidate cytidylyltransferase	cdsA	-	2.7.7.41	ko:K00981	ko00564,ko01100,ko01110,ko04070,map00564,map01100,map01110,map04070	M00093	R01799	RC00002	ko00000,ko00001,ko00002,ko01000	-	-	-	CTP_transf_1
DYD3_k127_487135_12	862908.BMS_0233	3.707e-93	312.0	COG0020@1|root,COG0020@2|Bacteria,1MVP1@1224|Proteobacteria,42PTV@68525|delta/epsilon subdivisions,2MSYQ@213481|Bdellovibrionales,2WMWK@28221|Deltaproteobacteria	213481|Bdellovibrionales	H	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids	uppS	GO:0002094,GO:0003674,GO:0003824,GO:0004659,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006066,GO:0006629,GO:0006720,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0009058,GO:0009987,GO:0016093,GO:0016094,GO:0016740,GO:0016765,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046165,GO:0071704,GO:1901576,GO:1901615,GO:1901617	2.5.1.31	ko:K00806	ko00900,ko01110,map00900,map01110	-	R06447	RC00279,RC02839	ko00000,ko00001,ko01000,ko01006	-	-	-	Prenyltransf
DYD3_k127_487135_16	1201288.M900_0302	4.41e-72	247.0	COG0233@1|root,COG0233@2|Bacteria,1N66T@1224|Proteobacteria,42NAA@68525|delta/epsilon subdivisions,2MT1I@213481|Bdellovibrionales,2WNMN@28221|Deltaproteobacteria	213481|Bdellovibrionales	J	Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another	frr	GO:0002181,GO:0002184,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006412,GO:0006415,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016043,GO:0019538,GO:0022411,GO:0032984,GO:0034641,GO:0034645,GO:0043021,GO:0043023,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043624,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044464,GO:0044877,GO:0071704,GO:0071840,GO:1901564,GO:1901566,GO:1901576	-	ko:K02838	-	-	-	-	ko00000,ko03012	-	-	-	RRF
DYD3_k127_487135_9	1353529.M899_1538	9.606e-115	374.0	COG0528@1|root,COG0528@2|Bacteria,1MV3N@1224|Proteobacteria,42M3X@68525|delta/epsilon subdivisions,2MSR9@213481|Bdellovibrionales,2WJDF@28221|Deltaproteobacteria	213481|Bdellovibrionales	F	Catalyzes the reversible phosphorylation of UMP to UDP	pyrH	GO:0003674,GO:0003824,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009041,GO:0009058,GO:0009117,GO:0009123,GO:0009165,GO:0009987,GO:0015949,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046483,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901576	2.7.4.22	ko:K09903	ko00240,ko01100,map00240,map01100	-	R00158	RC00002	ko00000,ko00001,ko01000	-	-	-	AA_kinase
DYD3_k127_487135_11	1353529.M899_1539	1.981e-95	321.0	COG0264@1|root,COG0264@2|Bacteria,1MUS2@1224|Proteobacteria,42NNS@68525|delta/epsilon subdivisions,2MSYM@213481|Bdellovibrionales,2WMS3@28221|Deltaproteobacteria	213481|Bdellovibrionales	J	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome	tsf	GO:0003674,GO:0003676,GO:0003723,GO:0003746,GO:0005488,GO:0006412,GO:0006414,GO:0006518,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576	-	ko:K02357	-	-	-	-	ko00000,ko03012,ko03029	-	-	-	EF_TS
DYD3_k127_487135_7	1353529.M899_1540	1.028e-123	401.0	COG0052@1|root,COG0052@2|Bacteria,1MU33@1224|Proteobacteria,42M3Y@68525|delta/epsilon subdivisions,2MSWZ@213481|Bdellovibrionales,2WJH5@28221|Deltaproteobacteria	213481|Bdellovibrionales	J	Belongs to the universal ribosomal protein uS2 family	rpsB	GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904	-	ko:K02967	ko03010,map03010	M00178,M00179	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_S2
DYD3_k127_487135_4	862908.BMS_0228	4.053e-201	653.0	COG1674@1|root,COG1674@2|Bacteria,1MVPI@1224|Proteobacteria,42N4X@68525|delta/epsilon subdivisions,2MSV9@213481|Bdellovibrionales,2WIPR@28221|Deltaproteobacteria	213481|Bdellovibrionales	D	PFAM cell divisionFtsK SpoIIIE	ftsK	-	-	ko:K03466	-	-	-	-	ko00000,ko03036	3.A.12	-	-	FtsK_4TM,FtsK_SpoIIIE,Ftsk_gamma
DYD3_k127_487135_19	1121904.ARBP01000033_gene3166	2.846e-55	195.0	2AU0F@1|root,31JKB@2|Bacteria,4NHS6@976|Bacteroidetes,47Q5C@768503|Cytophagia	976|Bacteroidetes	S	COG NOG14600 non supervised orthologous group	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_487135_23	471874.PROSTU_00109	9.552e-36	138.0	29XIP@1|root,30J9M@2|Bacteria,1QGXJ@1224|Proteobacteria,1TEDR@1236|Gammaproteobacteria,3ZADK@586|Providencia	1236|Gammaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_487135_43	1423724.BAMM01000043_gene2174	4.785e-06	48.0	2B9ZZ@1|root,323DM@2|Bacteria,1V6N4@1239|Firmicutes,4IRDZ@91061|Bacilli	91061|Bacilli	S	COG NOG15344 non supervised orthologous group	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_487135_37	411490.ANACAC_03280	1.492e-09	58.0	2B9ZZ@1|root,323DM@2|Bacteria,1V6N4@1239|Firmicutes,24K1H@186801|Clostridia	186801|Clostridia	S	COG NOG15344 non supervised orthologous group	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_487135_41	632245.CLP_3136	2.778e-07	52.0	2ED6K@1|root,3373A@2|Bacteria,1VI2S@1239|Firmicutes,24QZV@186801|Clostridia,36TJ8@31979|Clostridiaceae	186801|Clostridia	S	the current gene model (or a revised gene model) may contain one or more premature stops and or frameshifts	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_487135_38	363253.LI1147	2.466e-09	61.0	2DS6B@1|root,33ERK@2|Bacteria	2|Bacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_487135_34	321961.AVAO01000003_gene166	1.033e-14	74.0	2BXJK@1|root,33AIX@2|Bacteria	2|Bacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_487135_27	411490.ANACAC_03315	6.108e-24	106.0	2EBGV@1|root,335HF@2|Bacteria,1UPVS@1239|Firmicutes,24VUQ@186801|Clostridia	186801|Clostridia	S	COG NOG38524 non supervised orthologous group	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_487135_24	435837.HMPREF0798_02183	1.852e-29	119.0	2DMNG@1|root,32SP1@2|Bacteria,1VAXC@1239|Firmicutes,4HM1Q@91061|Bacilli,4H16H@90964|Staphylococcaceae	91061|Bacilli	S	COG NOG14552 non supervised orthologous group	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_487135_32	469606.FSCG_02151	5.781e-15	74.0	2DRSR@1|root,33CWI@2|Bacteria	2|Bacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_487135_36	886379.AEWI01000135_gene2266	1.176e-09	61.0	2EK6X@1|root,33DXA@2|Bacteria,4NY6H@976|Bacteroidetes,2G29J@200643|Bacteroidia,3XKG0@558415|Marinilabiliaceae	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_487135_28	498761.HM1_3148	6.671e-19	86.0	2DN97@1|root,32W7A@2|Bacteria,1VANB@1239|Firmicutes,24Q9J@186801|Clostridia	186801|Clostridia	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_487135_42	1087481.AGFX01000023_gene2245	4.15e-06	51.0	2EG09@1|root,339SB@2|Bacteria,1VG42@1239|Firmicutes,4HRC7@91061|Bacilli,26ZF2@186822|Paenibacillaceae	91061|Bacilli	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_487135_25	1403946.Q615_SPAC00010G0001	4.447e-28	114.0	2DN97@1|root,32W7A@2|Bacteria,1VANB@1239|Firmicutes,4HYZ4@91061|Bacilli	91061|Bacilli	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_487135_40	3712.Bo3g127600.1	1.389e-07	53.0	2E4EA@1|root,2S5QZ@2759|Eukaryota,38A44@33090|Viridiplantae,3GWQ7@35493|Streptophyta,3I1HA@3699|Brassicales	35493|Streptophyta	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_487531_7	138119.DSY0207	3.17e-10	64.0	COG0294@1|root,COG0294@2|Bacteria,1TPKT@1239|Firmicutes,248BE@186801|Clostridia,260AI@186807|Peptococcaceae	186801|Clostridia	H	dihydropteroate synthase	folP	-	2.5.1.15	ko:K00796	ko00790,ko01100,map00790,map01100	M00126,M00841	R03066,R03067	RC00121,RC00842	ko00000,ko00001,ko00002,ko01000	-	-	iHN637.CLJU_RS03115	Pterin_bind
DYD3_k127_487531_0	1353529.M899_1824	4.166e-286	891.0	COG0465@1|root,COG0465@2|Bacteria,1MU6J@1224|Proteobacteria,42M4Z@68525|delta/epsilon subdivisions,2MSQ8@213481|Bdellovibrionales,2WJ0D@28221|Deltaproteobacteria	213481|Bdellovibrionales	O	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins	ftsH	-	-	ko:K03798	-	M00742	-	-	ko00000,ko00002,ko01000,ko01002,ko03110	-	-	-	AAA,FtsH_ext,Peptidase_M41
DYD3_k127_487531_4	862908.BMS_1780	1.372e-50	196.0	COG0037@1|root,COG0037@2|Bacteria,1MU85@1224|Proteobacteria,42NF0@68525|delta/epsilon subdivisions,2MTD7@213481|Bdellovibrionales,2WIJK@28221|Deltaproteobacteria	213481|Bdellovibrionales	J	Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine	tilS	-	6.3.4.19	ko:K04075	-	-	R09597	RC02633,RC02634	ko00000,ko01000,ko03016	-	-	-	ATP_bind_3,TilS,TilS_C
DYD3_k127_487531_1	572547.Amico_1289	3.567e-120	402.0	COG3263@1|root,COG3263@2|Bacteria,3TAGX@508458|Synergistetes	508458|Synergistetes	P	Sodium/hydrogen exchanger family	-	-	-	ko:K11105	-	-	-	-	ko00000,ko02000	2.A.36.6	-	-	Na_H_Exchanger,TrkA_C
DYD3_k127_487531_2	765869.BDW_10410	7.367e-73	252.0	COG0745@1|root,COG0745@2|Bacteria,1MU67@1224|Proteobacteria,42N90@68525|delta/epsilon subdivisions,2MTHI@213481|Bdellovibrionales,2WJUU@28221|Deltaproteobacteria	213481|Bdellovibrionales	K	PFAM response regulator receiver	-	-	-	ko:K07665	ko02020,map02020	M00452,M00745	-	-	ko00000,ko00001,ko00002,ko01504,ko02022	-	-	-	Response_reg,Trans_reg_C
DYD3_k127_487531_3	264462.Bd2576	3.538e-65	241.0	COG0642@1|root,COG5000@1|root,COG2205@2|Bacteria,COG5000@2|Bacteria,1MW8M@1224|Proteobacteria,42QF7@68525|delta/epsilon subdivisions,2MTMK@213481|Bdellovibrionales,2WJAU@28221|Deltaproteobacteria	213481|Bdellovibrionales	T	Histidine kinase	-	-	2.7.13.3	ko:K07644	ko02020,map02020	M00452,M00745	-	-	ko00000,ko00001,ko00002,ko01000,ko01001,ko01504,ko02022	-	-	-	2CSK_N,HAMP,HATPase_c,HisKA,PAS_9,Response_reg
DYD3_k127_487531_5	1122135.KB893135_gene688	1.648e-13	85.0	COG2308@1|root,COG2308@2|Bacteria,1MUAD@1224|Proteobacteria,2TRI7@28211|Alphaproteobacteria	28211|Alphaproteobacteria	S	A circularly permuted ATPgrasp	-	-	-	-	-	-	-	-	-	-	-	-	CP_ATPgrasp_2
DYD3_k127_487531_8	929713.NIASO_01175	1.203e-08	69.0	COG1376@1|root,COG1376@2|Bacteria,4NNX7@976|Bacteroidetes,1IT01@117747|Sphingobacteriia	976|Bacteroidetes	S	L,D-transpeptidase catalytic domain	-	-	-	-	-	-	-	-	-	-	-	-	YkuD_2
DYD3_k127_487531_6	547045.NEISICOT_03300	9.326e-12	71.0	COG0790@1|root,COG0790@2|Bacteria,1MWPA@1224|Proteobacteria,2VM3A@28216|Betaproteobacteria,2KQPW@206351|Neisseriales	206351|Neisseriales	S	Sel1-like repeats.	-	-	-	ko:K07126	-	-	-	-	ko00000	-	-	-	Sel1
DYD3_k127_4899789_0	743720.Psefu_3481	7.631e-61	230.0	COG3228@1|root,COG3228@2|Bacteria,1R9QQ@1224|Proteobacteria,1SKRJ@1236|Gammaproteobacteria,1YUVE@136845|Pseudomonas putida group	1236|Gammaproteobacteria	S	Domain of unknown function (DUF4105)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4105
DYD3_k127_4925039_6	1201288.M900_0913	1.103e-30	125.0	COG4977@1|root,COG4977@2|Bacteria,1NBVS@1224|Proteobacteria,43DH1@68525|delta/epsilon subdivisions	1224|Proteobacteria	K	helix_turn_helix, arabinose operon control protein	-	-	-	ko:K19056	-	-	-	-	ko00000,ko03000	-	-	-	HTH_18
DYD3_k127_4925039_7	1353529.M899_0646	9.582e-28	115.0	COG0724@1|root,COG0724@2|Bacteria,1N6VR@1224|Proteobacteria,42V9Q@68525|delta/epsilon subdivisions,2WRRT@28221|Deltaproteobacteria	28221|Deltaproteobacteria	S	PFAM RNP-1 like RNA-binding protein	-	-	-	-	-	-	-	-	-	-	-	-	RRM_1
DYD3_k127_4925039_3	1336243.JAEA01000003_gene2264	5.609e-60	218.0	COG0596@1|root,COG0596@2|Bacteria,1RISS@1224|Proteobacteria	1224|Proteobacteria	S	Alpha/beta hydrolase family	-	-	3.4.11.5	ko:K01259	ko00330,map00330	-	R00135	-	ko00000,ko00001,ko01000,ko01002	-	-	-	Abhydrolase_1
DYD3_k127_4925039_2	1218103.CIN01S_11_00680	1.086e-62	221.0	COG0500@1|root,COG2226@2|Bacteria,4NJ84@976|Bacteroidetes,1HXEK@117743|Flavobacteriia,3ZP0N@59732|Chryseobacterium	976|Bacteroidetes	Q	Methyltransferase	-	-	-	-	-	-	-	-	-	-	-	-	Methyltransf_25
DYD3_k127_4925039_10	1538644.KO02_21715	4.956e-05	48.0	COG1502@1|root,COG1502@2|Bacteria	2|Bacteria	I	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol	-	-	-	-	-	-	-	-	-	-	-	-	ORF6N
DYD3_k127_4925039_5	592026.GCWU0000282_003169	3.388e-32	128.0	COG1502@1|root,COG1502@2|Bacteria,1TRJE@1239|Firmicutes,248ZE@186801|Clostridia	186801|Clostridia	I	Psort location Cytoplasmic, score	-	-	-	-	-	-	-	-	-	-	-	-	ORF6N
DYD3_k127_4925039_9	1123240.ATVO01000006_gene1668	4.529e-10	70.0	COG2274@1|root,COG2274@2|Bacteria,1MXTI@1224|Proteobacteria,2TUN0@28211|Alphaproteobacteria,2K1TC@204457|Sphingomonadales	204457|Sphingomonadales	V	ABC transporter, ATP-binding protein	-	-	-	ko:K02021	-	-	-	-	ko00000,ko02000	3.A.1.106,3.A.1.110,3.A.1.112,3.A.1.113,3.A.1.117,3.A.1.21	-	-	ABC_membrane,ABC_tran
DYD3_k127_4925039_1	1122603.ATVI01000007_gene1668	6.368e-75	263.0	COG0845@1|root,COG0845@2|Bacteria,1PZ6R@1224|Proteobacteria,1RRGC@1236|Gammaproteobacteria,1XA0N@135614|Xanthomonadales	135614|Xanthomonadales	M	RND transporter	-	-	-	-	-	-	-	-	-	-	-	-	Biotin_lipoyl_2,HlyD_3
DYD3_k127_4925039_4	1297742.A176_04935	6.511e-37	156.0	COG1538@1|root,COG1538@2|Bacteria,1MXB2@1224|Proteobacteria	1224|Proteobacteria	MU	Outer membrane component of multidrug efflux pump	-	-	-	-	-	-	-	-	-	-	-	-	OEP
DYD3_k127_4925039_8	1116369.KB890024_gene2616	5.836e-18	88.0	COG0346@1|root,COG0346@2|Bacteria,1MZXF@1224|Proteobacteria,2UBSQ@28211|Alphaproteobacteria,43Q2H@69277|Phyllobacteriaceae	28211|Alphaproteobacteria	E	Bleomycin resistance protein	-	-	-	-	-	-	-	-	-	-	-	-	Glyoxalase
DYD3_k127_4925039_11	1121935.AQXX01000142_gene2266	0.000408	43.0	2DSB0@1|root,33FBC@2|Bacteria,1NGBC@1224|Proteobacteria,1SH3C@1236|Gammaproteobacteria	1236|Gammaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_4925039_0	1353529.M899_2587	1.193e-147	480.0	COG1652@1|root,COG1652@2|Bacteria,1MUBV@1224|Proteobacteria,42QS9@68525|delta/epsilon subdivisions,2MTAP@213481|Bdellovibrionales,2WN3H@28221|Deltaproteobacteria	213481|Bdellovibrionales	S	LysM domain	-	-	-	-	-	-	-	-	-	-	-	-	LysM
DYD3_k127_4962817_0	862908.BMS_2284	4.075e-296	936.0	COG0847@1|root,COG1199@1|root,COG0847@2|Bacteria,COG1199@2|Bacteria,1MVCU@1224|Proteobacteria,42N57@68525|delta/epsilon subdivisions,2WJ82@28221|Deltaproteobacteria	28221|Deltaproteobacteria	L	SMART helicase c2	-	-	3.6.4.12	ko:K03722	-	-	-	-	ko00000,ko01000,ko03400	-	-	-	Helicase_C_2,RNase_T,ResIII
DYD3_k127_4962817_5	862908.BMS_2287	2.147e-17	84.0	COG0271@1|root,COG0271@2|Bacteria,1R3MQ@1224|Proteobacteria,43DKY@68525|delta/epsilon subdivisions,2MTCN@213481|Bdellovibrionales,2X8S4@28221|Deltaproteobacteria	213481|Bdellovibrionales	T	Belongs to the BolA IbaG family	-	-	-	-	-	-	-	-	-	-	-	-	BolA
DYD3_k127_4962817_2	1201288.M900_1814	7.006e-43	159.0	COG0278@1|root,COG0278@2|Bacteria,1MZ4V@1224|Proteobacteria,43154@68525|delta/epsilon subdivisions,2MT61@213481|Bdellovibrionales,2WWCI@28221|Deltaproteobacteria	213481|Bdellovibrionales	C	Belongs to the glutaredoxin family. Monothiol subfamily	grxD	-	-	ko:K07390	-	-	-	-	ko00000,ko03029,ko03110	-	-	-	Glutaredoxin
DYD3_k127_4962817_4	28532.XP_010524268.1	1.018e-21	108.0	COG1232@1|root,KOG1276@2759|Eukaryota,37PDD@33090|Viridiplantae,3GAA2@35493|Streptophyta,3HPJ8@3699|Brassicales	35493|Streptophyta	H	Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX	-	GO:0000003,GO:0003006,GO:0003674,GO:0003824,GO:0004729,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005740,GO:0005743,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0007275,GO:0008150,GO:0008152,GO:0009058,GO:0009507,GO:0009526,GO:0009528,GO:0009536,GO:0009706,GO:0009790,GO:0009791,GO:0009793,GO:0009941,GO:0009987,GO:0010154,GO:0015994,GO:0015995,GO:0016020,GO:0016491,GO:0016627,GO:0016634,GO:0018130,GO:0019438,GO:0019866,GO:0022414,GO:0031090,GO:0031966,GO:0031967,GO:0031969,GO:0031975,GO:0032501,GO:0032502,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042170,GO:0042440,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044249,GO:0044271,GO:0044422,GO:0044424,GO:0044429,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464,GO:0046148,GO:0046483,GO:0048316,GO:0048608,GO:0048731,GO:0048856,GO:0051186,GO:0051188,GO:0055114,GO:0061458,GO:0070818,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576	1.3.3.15,1.3.3.4	ko:K00231	ko00860,ko01100,ko01110,map00860,map01100,map01110	M00121	R03222,R04178	RC00885	ko00000,ko00001,ko00002,ko01000	-	-	-	Amino_oxidase
DYD3_k127_4962817_1	862908.BMS_0606	2.671e-89	297.0	COG0500@1|root,COG2226@2|Bacteria,1R9JW@1224|Proteobacteria,42M76@68525|delta/epsilon subdivisions,2MTER@213481|Bdellovibrionales,2WK4P@28221|Deltaproteobacteria	213481|Bdellovibrionales	Q	Methyltransferase	-	-	-	-	-	-	-	-	-	-	-	-	Methyltransf_11,Methyltransf_31
DYD3_k127_5005655_3	1280.SAXN108_1046	4.851e-05	54.0	COG3591@1|root,COG3591@2|Bacteria,1UYJF@1239|Firmicutes,4HZSV@91061|Bacilli,4GY2A@90964|Staphylococcaceae	91061|Bacilli	M	Belongs to the peptidase S1B family	sspA	-	3.4.21.19	ko:K01318	ko02024,map02024	-	-	-	ko00000,ko00001,ko01000,ko01002	-	-	-	Trypsin_2
DYD3_k127_5005655_1	1122134.KB893650_gene255	1.07e-78	269.0	28HKZ@1|root,2Z7VP@2|Bacteria,1R4QW@1224|Proteobacteria,1RZQX@1236|Gammaproteobacteria,1XPHX@135619|Oceanospirillales	135619|Oceanospirillales	S	Protein of unknown function (DUF3050)	-	-	-	-	-	-	-	-	-	-	-	-	DUF3050
DYD3_k127_5005655_0	1201290.M902_3216	3.63e-99	327.0	COG0176@1|root,COG0176@2|Bacteria,1MWQ8@1224|Proteobacteria,42M39@68525|delta/epsilon subdivisions,2MSWS@213481|Bdellovibrionales,2WJEZ@28221|Deltaproteobacteria	213481|Bdellovibrionales	F	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway	tal	-	2.2.1.2	ko:K00616	ko00030,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map01100,map01110,map01120,map01130,map01200,map01230	M00004,M00007	R01827	RC00439,RC00604	ko00000,ko00001,ko00002,ko01000	-	-	-	TAL_FSA
DYD3_k127_5006353_4	862908.BMS_2591	1.328e-39	160.0	COG2374@1|root,COG2374@2|Bacteria,1N5TK@1224|Proteobacteria,437GY@68525|delta/epsilon subdivisions,2MT6J@213481|Bdellovibrionales,2WSJQ@28221|Deltaproteobacteria	213481|Bdellovibrionales	S	Endonuclease/Exonuclease/phosphatase family	-	-	-	-	-	-	-	-	-	-	-	-	Exo_endo_phos
DYD3_k127_5006353_2	944481.JAFP01000001_gene1585	7.638e-58	210.0	COG1968@1|root,COG1968@2|Bacteria,1MX02@1224|Proteobacteria,42N67@68525|delta/epsilon subdivisions,2WKPK@28221|Deltaproteobacteria,2M6N9@213113|Desulfurellales	28221|Deltaproteobacteria	V	Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin	uppP	-	3.6.1.27	ko:K06153	ko00550,map00550	-	R05627	RC00002	ko00000,ko00001,ko01000,ko01011	-	-	-	BacA
DYD3_k127_5006353_3	1123326.JFBL01000010_gene744	9.152e-45	167.0	COG1495@1|root,COG1495@2|Bacteria,1N2C1@1224|Proteobacteria,430KK@68525|delta/epsilon subdivisions,2YRZG@29547|Epsilonproteobacteria	29547|Epsilonproteobacteria	C	Belongs to the DsbB family	-	-	-	ko:K03611	-	-	-	-	ko00000,ko03110	5.A.2.1	-	-	DsbB
DYD3_k127_5006353_1	1353529.M899_0925	6.571e-75	257.0	COG1651@1|root,COG1651@2|Bacteria,1MVS2@1224|Proteobacteria,42UNJ@68525|delta/epsilon subdivisions	1224|Proteobacteria	O	Thioredoxin	-	-	-	-	-	-	-	-	-	-	-	-	Thioredoxin_4
DYD3_k127_5006353_5	742817.HMPREF9449_01408	6.198e-06	55.0	COG1076@1|root,COG1076@2|Bacteria,4NF1B@976|Bacteroidetes,2FQ12@200643|Bacteroidia,22XU9@171551|Porphyromonadaceae	976|Bacteroidetes	O	Tellurite resistance protein TerB	-	-	-	ko:K05801	-	-	-	-	ko00000,ko03110	-	-	-	DnaJ,TerB
DYD3_k127_5006353_0	876269.ARWA01000001_gene2202	5.102e-102	349.0	COG0654@1|root,COG0654@2|Bacteria,1MUN4@1224|Proteobacteria,2TQT8@28211|Alphaproteobacteria,3NBGP@45404|Beijerinckiaceae	28211|Alphaproteobacteria	CH	FAD binding domain	pcpB	-	-	-	-	-	-	-	-	-	-	-	FAD_binding_3
DYD3_k127_5012449_7	1090319.KE386571_gene3108	1.211e-40	156.0	COG0350@1|root,COG0350@2|Bacteria,1N2YQ@1224|Proteobacteria,2TRRN@28211|Alphaproteobacteria,2KD23@204457|Sphingomonadales	204457|Sphingomonadales	L	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated	-	-	2.1.1.63	ko:K00567,ko:K10778	-	-	-	-	ko00000,ko01000,ko03000,ko03400	-	-	-	DNA_binding_1,Methyltransf_1N
DYD3_k127_5012449_2	1353529.M899_3200	7.548e-97	334.0	COG0122@1|root,COG2169@1|root,COG0122@2|Bacteria,COG2169@2|Bacteria,1QTXM@1224|Proteobacteria,42N8C@68525|delta/epsilon subdivisions,2MSXP@213481|Bdellovibrionales,2WM3N@28221|Deltaproteobacteria	213481|Bdellovibrionales	K	AlkA N-terminal domain	ada	-	3.2.2.21	ko:K13529,ko:K13530	ko03410,map03410	-	-	-	ko00000,ko00001,ko01000,ko03000,ko03400	-	-	-	Ada_Zn_binding,AlkA_N,HTH_18,HhH-GPD
DYD3_k127_5012449_12	485918.Cpin_2922	9.688e-09	68.0	COG0640@1|root,COG2169@1|root,COG0640@2|Bacteria,COG2169@2|Bacteria	2|Bacteria	K	sequence-specific DNA binding	sdpR	-	3.2.2.21	ko:K03490,ko:K03892,ko:K07720,ko:K13529,ko:K15051	ko02020,ko03410,map02020,map03410	M00519	-	-	ko00000,ko00001,ko00002,ko01000,ko02022,ko03000,ko03400	-	-	-	AraC_N,HTH_18,HTH_20,HTH_5
DYD3_k127_5012449_0	1353529.M899_3301	0.0	1139.0	COG1196@1|root,COG1196@2|Bacteria,1MUAQ@1224|Proteobacteria,42MN9@68525|delta/epsilon subdivisions,2MSR8@213481|Bdellovibrionales,2WJZF@28221|Deltaproteobacteria	213481|Bdellovibrionales	D	Required for chromosome condensation and partitioning	smc	-	-	ko:K03529	-	-	-	-	ko00000,ko03036	-	-	-	SMC_N,SMC_hinge
DYD3_k127_5012449_8	862908.BMS_3206	3.091e-29	124.0	COG2834@1|root,COG2834@2|Bacteria	2|Bacteria	M	Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane)	-	-	-	ko:K03634	-	-	-	-	ko00000	-	-	-	Cadherin,DUF285,DUF4292
DYD3_k127_5012449_6	862908.BMS_3165	3.249e-48	179.0	COG1396@1|root,COG1396@2|Bacteria	2|Bacteria	K	sequence-specific DNA binding	-	-	-	-	-	-	-	-	-	-	-	-	HTH_3,HTH_31
DYD3_k127_5012449_1	862908.BMS_3163	1.097e-110	367.0	COG1194@1|root,COG1194@2|Bacteria,1MUD4@1224|Proteobacteria,42PDR@68525|delta/epsilon subdivisions,2MT0K@213481|Bdellovibrionales,2WJ60@28221|Deltaproteobacteria	213481|Bdellovibrionales	L	A G-specific adenine glycosylase	mutY	-	-	ko:K03575	ko03410,map03410	-	-	-	ko00000,ko00001,ko01000,ko03400	-	-	-	EndIII_4Fe-2S,HhH-GPD,NUDIX_4
DYD3_k127_5012449_10	862908.BMS_0317	1.335e-11	71.0	COG1570@1|root,COG1570@2|Bacteria,1NJMY@1224|Proteobacteria	1224|Proteobacteria	L	exodeoxyribonuclease VII activity	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_5012449_11	1201288.M900_2530	6.636e-10	68.0	COG1579@1|root,COG1579@2|Bacteria	2|Bacteria	-	-	ptsN	-	-	ko:K07164	-	-	-	-	ko00000	-	-	-	zf-RING_7
DYD3_k127_5012449_4	862908.BMS_3157	1.109e-68	246.0	COG0337@1|root,COG0337@2|Bacteria,1MUBK@1224|Proteobacteria,42MW5@68525|delta/epsilon subdivisions,2MTV8@213481|Bdellovibrionales,2WJKR@28221|Deltaproteobacteria	213481|Bdellovibrionales	E	Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)	aroB	-	4.2.3.4	ko:K01735	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	M00022	R03083	RC00847	ko00000,ko00001,ko00002,ko01000	-	-	-	DHQ_synthase
DYD3_k127_5012449_3	1353529.M899_3255	1.742e-81	285.0	COG0128@1|root,COG0128@2|Bacteria,1MWMK@1224|Proteobacteria,42N01@68525|delta/epsilon subdivisions,2MTJC@213481|Bdellovibrionales,2WKJQ@28221|Deltaproteobacteria	213481|Bdellovibrionales	E	Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate	aroA	GO:0003674,GO:0003824,GO:0003866,GO:0006082,GO:0008150,GO:0008152,GO:0009058,GO:0009423,GO:0009987,GO:0016053,GO:0016740,GO:0016765,GO:0019752,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046417,GO:0071704,GO:1901576	2.5.1.19	ko:K00800	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	M00022	R03460	RC00350	ko00000,ko00001,ko00002,ko01000	-	-	-	EPSP_synthase
DYD3_k127_5021396_14	1122947.FR7_2190	6.016e-08	57.0	COG3861@1|root,COG3861@2|Bacteria,1V5R4@1239|Firmicutes	1239|Firmicutes	S	electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity	-	-	-	-	-	-	-	-	-	-	-	-	PRC
DYD3_k127_5021396_4	472759.Nhal_3045	1.314e-93	319.0	COG2010@1|root,COG2863@1|root,COG2010@2|Bacteria,COG2863@2|Bacteria,1MW1W@1224|Proteobacteria,1SYTA@1236|Gammaproteobacteria	1236|Gammaproteobacteria	C	Cytochrome C oxidase, cbb3-type, subunit III	-	-	-	-	-	-	-	-	-	-	-	-	Cytochrom_C,Cytochrome_CBB3
DYD3_k127_5021396_8	595460.RRSWK_05951	4.636e-53	193.0	COG3336@1|root,COG3336@2|Bacteria,2J2XG@203682|Planctomycetes	203682|Planctomycetes	C	Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG)	-	-	-	ko:K02351	-	-	-	-	ko00000	-	-	-	Caa3_CtaG
DYD3_k127_5021396_12	344747.PM8797T_02564	4.538e-20	95.0	2E5ZP@1|root,330P3@2|Bacteria,2J442@203682|Planctomycetes	203682|Planctomycetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_5021396_0	344747.PM8797T_02569	0.0	1246.0	COG0843@1|root,COG0843@2|Bacteria,2J2GN@203682|Planctomycetes	203682|Planctomycetes	C	Belongs to the heme-copper respiratory oxidase family	-	-	1.9.3.1	ko:K15408	ko00190,map00190	M00155	-	-	ko00000,ko00001,ko00002,ko01000	3.D.4.4	-	-	COX1
DYD3_k127_5021396_5	1123229.AUBC01000012_gene2707	2.041e-87	298.0	COG1622@1|root,COG2010@1|root,COG1622@2|Bacteria,COG2010@2|Bacteria,1MWHZ@1224|Proteobacteria,2TRS5@28211|Alphaproteobacteria,3JYC7@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	Cytochrome C oxidase subunit II, periplasmic domain	-	-	1.9.3.1	ko:K02275	ko00190,ko01100,map00190,map01100	M00155	R00081	RC00016	ko00000,ko00001,ko00002,ko01000	3.D.4.2,3.D.4.4,3.D.4.6	-	-	COX2,Cytochrom_C
DYD3_k127_5021396_3	264462.Bd2172	4.531e-135	440.0	COG0475@1|root,COG0475@2|Bacteria,1NRVM@1224|Proteobacteria,42ZBH@68525|delta/epsilon subdivisions,2WU4J@28221|Deltaproteobacteria	28221|Deltaproteobacteria	P	glutathione-regulated potassium exporter activity	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_5021396_9	862908.BMS_0457	7.778e-50	182.0	COG0517@1|root,COG0517@2|Bacteria,1QUKQ@1224|Proteobacteria,42TPD@68525|delta/epsilon subdivisions,2WQQ5@28221|Deltaproteobacteria	28221|Deltaproteobacteria	S	PFAM CBS domain containing protein	-	-	-	-	-	-	-	-	-	-	-	-	CBS
DYD3_k127_5021396_6	748449.Halha_2482	7.002e-59	217.0	COG0530@1|root,COG0530@2|Bacteria,1TRX0@1239|Firmicutes,25Q2D@186801|Clostridia,3WAZ0@53433|Halanaerobiales	186801|Clostridia	P	PFAM sodium calcium exchanger	-	-	-	ko:K07301	-	-	-	-	ko00000,ko02000	2.A.19.5	-	-	Na_Ca_ex
DYD3_k127_5021396_2	240016.ABIZ01000001_gene5384	4.213e-274	869.0	COG0474@1|root,COG0474@2|Bacteria,46TTZ@74201|Verrucomicrobia,2IVBX@203494|Verrucomicrobiae	203494|Verrucomicrobiae	P	Cation transporter/ATPase, N-terminus	-	-	3.6.3.8	ko:K01537	-	-	-	-	ko00000,ko01000	3.A.3.2	-	-	Cation_ATPase_C,Cation_ATPase_N,E1-E2_ATPase,Hydrolase
DYD3_k127_5021396_1	192952.MM_2723	2.721e-307	961.0	COG0574@1|root,arCOG01111@2157|Archaea,2XU2T@28890|Euryarchaeota,2N97B@224756|Methanomicrobia	224756|Methanomicrobia	G	Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate	-	-	2.7.9.2	ko:K01007	ko00620,ko00680,ko00720,ko01100,ko01120,ko01200,map00620,map00680,map00720,map01100,map01120,map01200	M00173,M00374	R00199	RC00002,RC00015	ko00000,ko00001,ko00002,ko01000	-	-	-	PEP-utilizers,PEP-utilizers_C,PPDK_N
DYD3_k127_5021396_10	1201288.M900_0954	3.196e-32	129.0	COG1278@1|root,COG1278@2|Bacteria	2|Bacteria	K	Cold shock	cspA	-	-	ko:K03704	-	-	-	-	ko00000,ko03000	-	-	-	CSD,Ribosomal_S30AE
DYD3_k127_5021396_13	491205.JARQ01000001_gene681	6.631e-09	66.0	COG2114@1|root,COG2114@2|Bacteria	2|Bacteria	T	Pfam Adenylate and Guanylate cyclase catalytic domain	-	-	4.6.1.1	ko:K01768	ko00230,ko02025,ko04113,ko04213,map00230,map02025,map04113,map04213	M00695	R00089,R00434	RC00295	ko00000,ko00001,ko00002,ko01000	-	-	-	DUF4242,Guanylate_cyc,HTH_18
DYD3_k127_5021396_11	1229487.AMYW01000042_gene961	3.215e-23	117.0	COG0457@1|root,COG0457@2|Bacteria	1229487.AMYW01000042_gene961|-	S	peptidyl-tyrosine sulfation	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_5021396_7	1232437.KL662060_gene4106	1.026e-56	205.0	COG0419@1|root,COG0419@2|Bacteria,1R5QS@1224|Proteobacteria,42USI@68525|delta/epsilon subdivisions,2WQNU@28221|Deltaproteobacteria	28221|Deltaproteobacteria	L	Protein of unknown function (DUF3732)	-	-	-	-	-	-	-	-	-	-	-	-	DUF3732
DYD3_k127_5034023_5	1201288.M900_0566	4.53e-88	298.0	COG2206@1|root,COG2206@2|Bacteria,1RAQS@1224|Proteobacteria,42MEJ@68525|delta/epsilon subdivisions,2MT2H@213481|Bdellovibrionales,2WP5V@28221|Deltaproteobacteria	213481|Bdellovibrionales	T	metal-dependent phosphohydrolase, HD sub domain	-	-	-	-	-	-	-	-	-	-	-	-	HAMP,HD,HD_5
DYD3_k127_5034023_1	1353529.M899_3118	6.379e-190	599.0	COG0626@1|root,COG0626@2|Bacteria,1MU57@1224|Proteobacteria,42M67@68525|delta/epsilon subdivisions,2MSSZ@213481|Bdellovibrionales,2WJQX@28221|Deltaproteobacteria	213481|Bdellovibrionales	E	Cys Met metabolism	metC	-	2.5.1.48,4.4.1.1	ko:K01739,ko:K01758	ko00260,ko00270,ko00450,ko00920,ko01100,ko01110,ko01130,ko01230,map00260,map00270,map00450,map00920,map01100,map01110,map01130,map01230	M00017,M00338	R00782,R00999,R01001,R01288,R02408,R02508,R03217,R03260,R04770,R04930,R04944,R04945,R04946,R09366	RC00020,RC00056,RC00069,RC00348,RC00382,RC00420,RC00710,RC01209,RC01210,RC01245,RC02303,RC02848,RC02866	ko00000,ko00001,ko00002,ko01000,ko04147	-	-	-	Cys_Met_Meta_PP
DYD3_k127_5034023_3	1353529.M899_3115	1.425e-143	466.0	COG0189@1|root,COG0189@2|Bacteria,1QVU3@1224|Proteobacteria,42ZUT@68525|delta/epsilon subdivisions,2MSXS@213481|Bdellovibrionales,2X8HH@28221|Deltaproteobacteria	213481|Bdellovibrionales	HJ	Glutamate-cysteine ligase	gshA	-	6.3.2.2	ko:K01919	ko00270,ko00480,ko01100,map00270,map00480,map01100	M00118	R00894,R10993	RC00064,RC00090	ko00000,ko00001,ko00002,ko01000	-	-	-	GshA
DYD3_k127_5034023_4	862908.BMS_3009	5.589e-100	336.0	COG0003@1|root,COG0003@2|Bacteria,1PMWP@1224|Proteobacteria,42RUR@68525|delta/epsilon subdivisions,2MT55@213481|Bdellovibrionales,2WNEE@28221|Deltaproteobacteria	213481|Bdellovibrionales	D	Adventurous gliding motility protein R	agmR	-	-	-	-	-	-	-	-	-	-	-	ArsA_ATPase
DYD3_k127_5034023_7	862908.BMS_3008	2.078e-48	183.0	COG0003@1|root,COG0003@2|Bacteria,1NA7C@1224|Proteobacteria,42V2J@68525|delta/epsilon subdivisions,2MTBW@213481|Bdellovibrionales,2WS25@28221|Deltaproteobacteria	213481|Bdellovibrionales	P	COG0003 Oxyanion-translocating ATPase	-	-	3.6.3.16	ko:K01551	-	-	-	-	ko00000,ko01000,ko02000	3.A.19.1,3.A.21.1,3.A.4.1	-	-	ArsA_ATPase
DYD3_k127_5034023_8	1201288.M900_0574	2.334e-43	167.0	COG3637@1|root,COG3637@2|Bacteria	2|Bacteria	M	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety	-	-	-	ko:K12976,ko:K22110	-	-	-	-	ko00000,ko01000,ko01005,ko02000	1.B.35.1,1.B.35.2	-	-	DUF2490,KdgM,OMP_b-brl,PagL
DYD3_k127_5034023_6	1201290.M902_1881	1.119e-49	179.0	COG5394@1|root,COG5394@2|Bacteria,1RHRC@1224|Proteobacteria,42WB9@68525|delta/epsilon subdivisions,2MTB0@213481|Bdellovibrionales,2WSSJ@28221|Deltaproteobacteria	213481|Bdellovibrionales	S	regulator	-	-	-	-	-	-	-	-	-	-	-	-	PHB_acc_N
DYD3_k127_5034023_2	1353529.M899_3110	2.24e-147	488.0	COG0457@1|root,COG0457@2|Bacteria,1MYB8@1224|Proteobacteria,42P5H@68525|delta/epsilon subdivisions,2MTGX@213481|Bdellovibrionales,2WKAU@28221|Deltaproteobacteria	213481|Bdellovibrionales	NU	repeat-containing protein	-	-	-	-	-	-	-	-	-	-	-	-	TPR_14,TPR_16,TPR_19,TPR_2,TPR_4,TPR_6,TPR_7,TPR_8
DYD3_k127_5034023_0	862908.BMS_3003	2.4e-213	679.0	COG4166@1|root,COG4166@2|Bacteria,1P91R@1224|Proteobacteria,42Z5J@68525|delta/epsilon subdivisions,2X7Z6@28221|Deltaproteobacteria	28221|Deltaproteobacteria	E	Bacterial extracellular solute-binding proteins, family 5 Middle	-	-	-	ko:K13893	ko02010,map02010	M00349	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.5.21,3.A.1.5.24	-	-	SBP_bac_5
DYD3_k127_5034023_9	862908.BMS_3002	5.865e-43	160.0	COG0601@1|root,COG0601@2|Bacteria,1MU8Z@1224|Proteobacteria,43AFB@68525|delta/epsilon subdivisions	1224|Proteobacteria	P	COG0601 ABC-type dipeptide oligopeptide nickel transport systems, permease components	oppB	-	-	ko:K02033,ko:K15585	ko02010,ko02024,map02010,map02024	M00239,M00440	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.5	-	-	BPD_transp_1
DYD3_k127_5034023_11	633131.TR2A62_2333	3.884e-09	57.0	COG3791@1|root,COG3791@2|Bacteria,1N031@1224|Proteobacteria,2UC7G@28211|Alphaproteobacteria	28211|Alphaproteobacteria	S	Glutathione-dependent formaldehyde-activating	-	-	-	-	-	-	-	-	-	-	-	-	GFA
DYD3_k127_5079499_8	862908.BMS_1168	3.532e-09	62.0	COG0314@1|root,COG0476@1|root,COG0607@1|root,COG0314@2|Bacteria,COG0476@2|Bacteria,COG0607@2|Bacteria,1MW7H@1224|Proteobacteria,42NEC@68525|delta/epsilon subdivisions,2WK08@28221|Deltaproteobacteria	28221|Deltaproteobacteria	H	PFAM UBA THIF-type NAD FAD binding protein	-	-	2.7.7.80,2.8.1.11	ko:K21147	ko04122,map04122	-	R07459,R07461	RC00043	ko00000,ko00001,ko01000	-	-	-	ThiF
DYD3_k127_5079499_7	1123376.AUIU01000011_gene1046	6.005e-10	64.0	COG1826@1|root,COG1826@2|Bacteria,3J1A4@40117|Nitrospirae	40117|Nitrospirae	U	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system	-	-	-	ko:K03116	ko03060,ko03070,map03060,map03070	M00336	-	-	ko00000,ko00001,ko00002,ko02044	2.A.64	-	-	MttA_Hcf106
DYD3_k127_5079499_3	1297742.A176_02988	8.32e-67	230.0	COG2080@1|root,COG2080@2|Bacteria,1RD8C@1224|Proteobacteria,42SQU@68525|delta/epsilon subdivisions,2WPRP@28221|Deltaproteobacteria,2YUSU@29|Myxococcales	28221|Deltaproteobacteria	C	[2Fe-2S] binding domain	-	-	1.3.99.16	ko:K07302	-	-	-	-	ko00000,ko01000	-	-	-	Fer2,Fer2_2
DYD3_k127_5079499_0	378806.STAUR_1727	7.479e-294	921.0	COG1529@1|root,COG1529@2|Bacteria,1QTTJ@1224|Proteobacteria,42ZB2@68525|delta/epsilon subdivisions,2WUMC@28221|Deltaproteobacteria,2YUFT@29|Myxococcales	28221|Deltaproteobacteria	C	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain	-	-	1.3.99.16	ko:K07303	-	-	-	-	ko00000,ko01000	-	-	-	Ald_Xan_dh_C2
DYD3_k127_5079499_2	862908.BMS_3214	2.369e-74	257.0	COG1028@1|root,COG1028@2|Bacteria,1PXPD@1224|Proteobacteria,430B3@68525|delta/epsilon subdivisions,2WVQT@28221|Deltaproteobacteria	28221|Deltaproteobacteria	IQ	short chain dehydrogenase	-	-	-	-	-	-	-	-	-	-	-	-	adh_short
DYD3_k127_5079499_4	1122939.ATUD01000001_gene778	1.883e-36	149.0	COG2030@1|root,COG2030@2|Bacteria,2GNQQ@201174|Actinobacteria,4CS7Q@84995|Rubrobacteria	84995|Rubrobacteria	I	MaoC like domain	-	-	-	-	-	-	-	-	-	-	-	-	MaoC_dehydratas
DYD3_k127_5079499_6	1184267.A11Q_123	1.041e-32	130.0	COG1765@1|root,COG1765@2|Bacteria,1N2BT@1224|Proteobacteria,42NP7@68525|delta/epsilon subdivisions,2MUI2@213481|Bdellovibrionales,2WKJU@28221|Deltaproteobacteria	213481|Bdellovibrionales	O	PFAM OsmC family protein	-	-	-	ko:K06889,ko:K07397	-	-	-	-	ko00000	-	-	-	Abhydrolase_1,Hydrolase_4,OsmC
DYD3_k127_5079499_5	264462.Bd3621	2.925e-34	143.0	COG0583@1|root,COG0583@2|Bacteria,1MVHT@1224|Proteobacteria	1224|Proteobacteria	K	Transcriptional regulator	nhaR	GO:0001121,GO:0001130,GO:0001131,GO:0001140,GO:0001216,GO:0003674,GO:0003700,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006351,GO:0006355,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009889,GO:0009891,GO:0009893,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0016070,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031334,GO:0032774,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0043254,GO:0044087,GO:0044089,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044464,GO:0045893,GO:0045935,GO:0046483,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051128,GO:0051130,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0060255,GO:0065007,GO:0071704,GO:0080090,GO:0090304,GO:0097659,GO:0140110,GO:1901360,GO:1901362,GO:1901576,GO:1902680,GO:1903506,GO:1903508,GO:2000112,GO:2000142,GO:2000144,GO:2001141	-	ko:K03717	-	-	-	-	ko00000,ko03000	-	-	-	HTH_1,LysR_substrate
DYD3_k127_5079499_1	330214.NIDE0144	1.724e-245	775.0	COG0380@1|root,COG0380@2|Bacteria,3J109@40117|Nitrospirae	40117|Nitrospirae	M	Glycosyltransferase family 20	-	-	2.4.1.15,2.4.1.347	ko:K00697	ko00500,ko01100,map00500,map01100	-	R02737	RC00005,RC00049,RC02748	ko00000,ko00001,ko01000,ko01003	-	GT20	-	Glyco_transf_20
DYD3_k127_5103201_2	67356.KL575658_gene8359	1.198e-19	92.0	2C19F@1|root,32ZRH@2|Bacteria,2I872@201174|Actinobacteria	201174|Actinobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_5103201_1	886293.Sinac_1500	1.011e-227	726.0	COG1297@1|root,COG1297@2|Bacteria,2IYGI@203682|Planctomycetes	203682|Planctomycetes	S	PFAM OPT oligopeptide transporter protein	-	-	-	-	-	-	-	-	-	-	-	-	OPT
DYD3_k127_5103201_0	1218108.KB908298_gene3465	3.036e-261	813.0	COG0318@1|root,COG0318@2|Bacteria,4NFPF@976|Bacteroidetes,1HZVU@117743|Flavobacteriia	976|Bacteroidetes	IQ	amp-binding	-	-	-	ko:K00666	-	-	-	-	ko00000,ko01000,ko01004	-	-	-	AMP-binding,AMP-binding_C
DYD3_k127_5148273_1	1353529.M899_1553	5.458e-91	306.0	COG1234@1|root,COG1234@2|Bacteria,1QU4B@1224|Proteobacteria,42SHU@68525|delta/epsilon subdivisions,2WPGG@28221|Deltaproteobacteria	28221|Deltaproteobacteria	S	cAMP phosphodiesterases class-II	-	-	3.1.4.17	ko:K01120	ko00230,map00230	-	R00191,R01234	RC00296	ko00000,ko00001,ko01000	-	-	-	Lactamase_B_2,PDEase_II
DYD3_k127_5148273_5	1353529.M899_1551	4.628e-61	220.0	COG0313@1|root,COG0313@2|Bacteria,1MU0E@1224|Proteobacteria,42P3I@68525|delta/epsilon subdivisions,2WM37@28221|Deltaproteobacteria	28221|Deltaproteobacteria	H	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA	rsmI	-	2.1.1.198	ko:K07056	-	-	-	-	ko00000,ko01000,ko03009	-	-	-	TP_methylase
DYD3_k127_5148273_15	862908.BMS_1890	2.143e-36	141.0	COG1366@1|root,COG1366@2|Bacteria	2|Bacteria	T	antisigma factor binding	spoIIAA	-	-	ko:K04749,ko:K06378	-	-	-	-	ko00000,ko03021	-	-	-	STAS,STAS_2
DYD3_k127_5148273_14	1353529.M899_1548	4.598e-41	160.0	COG0164@1|root,COG0164@2|Bacteria,1RA65@1224|Proteobacteria,42REG@68525|delta/epsilon subdivisions,2MT9H@213481|Bdellovibrionales,2WNK2@28221|Deltaproteobacteria	213481|Bdellovibrionales	L	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids	rnhB	GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004523,GO:0004540,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006271,GO:0006273,GO:0006281,GO:0006298,GO:0006401,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009987,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0019439,GO:0022616,GO:0032299,GO:0032991,GO:0033554,GO:0033567,GO:0034641,GO:0034645,GO:0034655,GO:0043137,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044270,GO:0044424,GO:0044464,GO:0046483,GO:0046700,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0140098,GO:1901360,GO:1901361,GO:1901575,GO:1901576	3.1.26.4	ko:K03470	ko03030,map03030	-	-	-	ko00000,ko00001,ko01000,ko03032	-	-	-	DUF208,RNase_HII
DYD3_k127_5148273_8	1353529.M899_1548	1.441e-49	185.0	COG0164@1|root,COG0164@2|Bacteria,1RA65@1224|Proteobacteria,42REG@68525|delta/epsilon subdivisions,2MT9H@213481|Bdellovibrionales,2WNK2@28221|Deltaproteobacteria	213481|Bdellovibrionales	L	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids	rnhB	GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004523,GO:0004540,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006271,GO:0006273,GO:0006281,GO:0006298,GO:0006401,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009987,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0019439,GO:0022616,GO:0032299,GO:0032991,GO:0033554,GO:0033567,GO:0034641,GO:0034645,GO:0034655,GO:0043137,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044270,GO:0044424,GO:0044464,GO:0046483,GO:0046700,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0140098,GO:1901360,GO:1901361,GO:1901575,GO:1901576	3.1.26.4	ko:K03470	ko03030,map03030	-	-	-	ko00000,ko00001,ko01000,ko03032	-	-	-	DUF208,RNase_HII
DYD3_k127_5148273_11	862908.BMS_1894	1.99e-44	164.0	COG0335@1|root,COG0335@2|Bacteria,1RH3A@1224|Proteobacteria,42TMU@68525|delta/epsilon subdivisions,2MTAA@213481|Bdellovibrionales,2WQ67@28221|Deltaproteobacteria	213481|Bdellovibrionales	J	This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site	rplS	GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904	-	ko:K02884	ko03010,map03010	M00178	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_L19
DYD3_k127_5148273_3	1353529.M899_1546	1.115e-76	261.0	COG4752@1|root,COG4752@2|Bacteria,1RJ2G@1224|Proteobacteria,42SXX@68525|delta/epsilon subdivisions,2MT65@213481|Bdellovibrionales,2WP1I@28221|Deltaproteobacteria	213481|Bdellovibrionales	S	SAM-dependent RNA methyltransferase	-	-	-	-	-	-	-	-	-	-	-	-	Methyltrn_RNA_4
DYD3_k127_5148273_4	1184267.A11Q_482	3e-72	251.0	COG2876@1|root,COG2876@2|Bacteria,1QVAD@1224|Proteobacteria,42MU4@68525|delta/epsilon subdivisions,2MT70@213481|Bdellovibrionales,2WJ8Y@28221|Deltaproteobacteria	213481|Bdellovibrionales	E	PFAM DAHP synthetase I KDSA	-	-	2.5.1.54,5.4.99.5	ko:K01626,ko:K03856,ko:K04516,ko:K13853	ko00400,ko01100,ko01110,ko01130,ko01230,ko02024,map00400,map01100,map01110,map01130,map01230,map02024	M00022,M00024,M00025	R01715,R01826	RC00435,RC03116	ko00000,ko00001,ko00002,ko01000	-	-	-	CM_2,DAHP_synth_1
DYD3_k127_5148273_10	1184267.A11Q_481	6.742e-48	179.0	COG0500@1|root,COG2226@2|Bacteria,1MX8I@1224|Proteobacteria,42P2Z@68525|delta/epsilon subdivisions,2MT3P@213481|Bdellovibrionales,2WNJ6@28221|Deltaproteobacteria	213481|Bdellovibrionales	H	Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) and the conversion of 2-polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2- polyprenyl-3-methyl-6-methoxy-1,4-benzoquinol (DMQH2)	ubiE	-	2.1.1.163,2.1.1.201	ko:K03183	ko00130,ko01100,ko01110,map00130,map01100,map01110	M00116,M00117	R04990,R04993,R06859,R08774,R09736	RC00003,RC01253,RC01662	ko00000,ko00001,ko00002,ko01000	-	-	-	Ubie_methyltran
DYD3_k127_5148273_0	1201290.M902_2282	5.163e-145	464.0	COG0447@1|root,COG0447@2|Bacteria,1QTZ2@1224|Proteobacteria,42MZ7@68525|delta/epsilon subdivisions,2MST0@213481|Bdellovibrionales,2WKXM@28221|Deltaproteobacteria	213481|Bdellovibrionales	H	Belongs to the enoyl-CoA hydratase isomerase family. MenB subfamily	menB	-	4.1.3.36	ko:K01661	ko00130,ko01100,ko01110,map00130,map01100,map01110	M00116	R07263	RC01923	ko00000,ko00001,ko00002,ko01000	-	-	-	ECH_1
DYD3_k127_5148273_17	1444711.CCJF01000005_gene1239	1.68e-31	136.0	COG1169@1|root,COG1169@2|Bacteria,2JG0M@204428|Chlamydiae	204428|Chlamydiae	HQ	Isochorismate synthase	menF	-	5.4.4.2	ko:K02552	ko00130,ko01053,ko01100,ko01110,ko01130,map00130,map01053,map01100,map01110,map01130	M00116	R01717	RC00588	ko00000,ko00001,ko00002,ko01000	-	-	-	Chorismate_bind
DYD3_k127_5148273_6	1184267.A11Q_484	4.31e-56	214.0	COG1165@1|root,COG1165@2|Bacteria,1MVMZ@1224|Proteobacteria,42PNC@68525|delta/epsilon subdivisions,2MT3I@213481|Bdellovibrionales,2WKSZ@28221|Deltaproteobacteria	213481|Bdellovibrionales	H	Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate (SEPHCHC)	menD	-	2.2.1.9	ko:K02551	ko00130,ko01100,ko01110,map00130,map01100,map01110	M00116	R08165	RC02186	ko00000,ko00001,ko00002,ko01000	-	-	-	TPP_enzyme_C,TPP_enzyme_M_2,TPP_enzyme_N
DYD3_k127_5148273_20	525367.HMPREF0556_12534	8.367e-15	82.0	COG0596@1|root,COG0596@2|Bacteria,1TS4C@1239|Firmicutes,4HB6G@91061|Bacilli,26K3M@186820|Listeriaceae	91061|Bacilli	H	Catalyzes a proton abstraction reaction that results in 2,5-elimination of pyruvate from 2-succinyl-5-enolpyruvyl-6- hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC) and the formation of 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate (SHCHC)	menH	GO:0003674,GO:0003824,GO:0016787	4.2.99.20	ko:K08680	ko00130,ko01100,ko01110,map00130,map01100,map01110	M00116	R08166	RC02148,RC02475	ko00000,ko00001,ko00002,ko01000	-	-	-	Abhydrolase_1,Abhydrolase_6
DYD3_k127_5148273_9	1184267.A11Q_579	1.8e-49	188.0	COG1575@1|root,COG1575@2|Bacteria,1MXQQ@1224|Proteobacteria,42S4J@68525|delta/epsilon subdivisions,2MT1D@213481|Bdellovibrionales,2WNH4@28221|Deltaproteobacteria	213481|Bdellovibrionales	H	Belongs to the MenA family. Type 1 subfamily	menA	-	2.5.1.74	ko:K02548	ko00130,ko01100,ko01110,map00130,map01100,map01110	M00116	R05617,R06858,R10757	RC02935,RC02936,RC03264	ko00000,ko00001,ko00002,ko01000,ko01006	-	-	-	UbiA
DYD3_k127_5148273_21	765869.BDW_01905	2.781e-11	74.0	COG4948@1|root,COG4948@2|Bacteria,1Q221@1224|Proteobacteria,43F0Z@68525|delta/epsilon subdivisions,2MUAR@213481|Bdellovibrionales,2WYMY@28221|Deltaproteobacteria	213481|Bdellovibrionales	M	Mandelate Racemase Muconate Lactonizing	-	-	4.2.1.113	ko:K02549	ko00130,ko01100,ko01110,map00130,map01100,map01110	M00116	R04031	RC01053	ko00000,ko00001,ko00002,ko01000	-	-	-	-
DYD3_k127_5148273_12	716544.wcw_1030	1.094e-42	170.0	COG0318@1|root,COG0318@2|Bacteria,2JFYB@204428|Chlamydiae	204428|Chlamydiae	IQ	AMP-binding enzyme	menE	-	6.2.1.26	ko:K01911	ko00130,ko01100,ko01110,map00130,map01100,map01110	M00116	R04030	RC00004,RC00014	ko00000,ko00001,ko00002,ko01000	-	-	-	AMP-binding
DYD3_k127_5148273_18	215803.DB30_4960	1.754e-22	101.0	COG0745@1|root,COG0745@2|Bacteria,1NEVF@1224|Proteobacteria,43C0G@68525|delta/epsilon subdivisions,2WY70@28221|Deltaproteobacteria,2Z3EX@29|Myxococcales	28221|Deltaproteobacteria	KT	cheY-homologous receiver domain	-	-	-	-	-	-	-	-	-	-	-	-	Response_reg
DYD3_k127_5148273_2	63737.Npun_F4131	6.278e-90	310.0	COG0642@1|root,COG0745@1|root,COG0745@2|Bacteria,COG2205@2|Bacteria	63737.Npun_F4131|-	T	PhoQ Sensor	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_5148273_7	483218.BACPEC_02704	8.626e-54	197.0	COG0336@1|root,COG0336@2|Bacteria,1TPBV@1239|Firmicutes,247JF@186801|Clostridia,268XR@186813|unclassified Clostridiales	186801|Clostridia	J	Belongs to the RNA methyltransferase TrmD family	trmD	-	2.1.1.228	ko:K00554	-	-	R00597	RC00003,RC00334	ko00000,ko01000,ko03016	-	-	-	tRNA_m1G_MT
DYD3_k127_5148273_13	1201288.M900_A0262	2.267e-42	161.0	COG0806@1|root,COG0806@2|Bacteria	2|Bacteria	J	ribosome binding	rimM	GO:0000028,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016043,GO:0016070,GO:0016072,GO:0022607,GO:0022613,GO:0022618,GO:0030490,GO:0034470,GO:0034622,GO:0034641,GO:0034660,GO:0040007,GO:0042254,GO:0042255,GO:0042274,GO:0043170,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0090304,GO:1901360	-	ko:K02860	-	-	-	-	ko00000,ko03009	-	-	-	PRC,RimM
DYD3_k127_5148273_16	1353529.M899_2068	1.165e-34	133.0	COG1837@1|root,COG1837@2|Bacteria,1N7IX@1224|Proteobacteria,42TXI@68525|delta/epsilon subdivisions,2MT7A@213481|Bdellovibrionales,2WQBS@28221|Deltaproteobacteria	213481|Bdellovibrionales	S	Belongs to the UPF0109 family	-	-	-	ko:K06960	-	-	-	-	ko00000	-	-	-	KH_4
DYD3_k127_5171364_1	1201290.M902_2452	0.0002045	45.0	COG1404@1|root,COG1404@2|Bacteria,1MU3S@1224|Proteobacteria,42Q3Z@68525|delta/epsilon subdivisions,2MSP7@213481|Bdellovibrionales,2WJPC@28221|Deltaproteobacteria	213481|Bdellovibrionales	O	Belongs to the peptidase S8 family	-	-	-	-	-	-	-	-	-	-	-	-	CUB,He_PIG,Peptidase_S8
DYD3_k127_5186079_3	862908.BMS_0072	1.518e-120	405.0	COG0595@1|root,COG0595@2|Bacteria,1MUGV@1224|Proteobacteria,42M65@68525|delta/epsilon subdivisions,2WIQ9@28221|Deltaproteobacteria	28221|Deltaproteobacteria	S	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay	rnj	-	-	ko:K12574	ko03018,map03018	-	-	-	ko00000,ko00001,ko01000,ko03019	-	-	-	Lactamase_B,Lactamase_B_2,RMMBL
DYD3_k127_5186079_5	1353529.M899_0084	1.689e-84	286.0	COG0572@1|root,COG0572@2|Bacteria,1MWCH@1224|Proteobacteria,42T0E@68525|delta/epsilon subdivisions,2MSY5@213481|Bdellovibrionales,2WPTV@28221|Deltaproteobacteria	213481|Bdellovibrionales	F	Belongs to the uridine kinase family	udk	-	2.7.1.19,2.7.1.48	ko:K00855,ko:K00876	ko00240,ko00710,ko00983,ko01100,ko01120,ko01200,map00240,map00710,map00983,map01100,map01120,map01200	M00165,M00166	R00513,R00516,R00517,R00962,R00964,R00967,R00968,R00970,R01523,R01548,R01549,R01880,R02091,R02096,R02097,R02327,R02332,R02371,R02372,R08232	RC00002,RC00017	ko00000,ko00001,ko00002,ko01000	-	-	-	PRK
DYD3_k127_5186079_7	862908.BMS_0076	1.634e-71	252.0	COG2264@1|root,COG2264@2|Bacteria,1MUPC@1224|Proteobacteria,42NSS@68525|delta/epsilon subdivisions,2MT86@213481|Bdellovibrionales,2WIVV@28221|Deltaproteobacteria	213481|Bdellovibrionales	J	Ribosomal protein L11 methyltransferase	prmA	-	-	ko:K02687	-	-	-	-	ko00000,ko01000,ko03009	-	-	-	PrmA
DYD3_k127_5186079_14	1201288.M900_0152	4.8e-36	145.0	COG1385@1|root,COG1385@2|Bacteria,1PDCK@1224|Proteobacteria,4377K@68525|delta/epsilon subdivisions,2MTCH@213481|Bdellovibrionales,2X2QU@28221|Deltaproteobacteria	213481|Bdellovibrionales	J	Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit	-	-	2.1.1.193	ko:K09761	-	-	-	-	ko00000,ko01000,ko03009	-	-	-	Methyltrans_RNA
DYD3_k127_5186079_15	862908.BMS_0078	4.224e-13	78.0	COG1714@1|root,COG1714@2|Bacteria	2|Bacteria	S	RDD family	-	-	-	-	-	-	-	-	-	-	-	-	RDD
DYD3_k127_5186079_10	862908.BMS_0079	3.252e-56	199.0	COG0615@1|root,COG0615@2|Bacteria,1REW3@1224|Proteobacteria,42SGQ@68525|delta/epsilon subdivisions,2MSZH@213481|Bdellovibrionales,2WPTP@28221|Deltaproteobacteria	213481|Bdellovibrionales	H	Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose	rfaE	-	-	-	-	-	-	-	-	-	-	-	CTP_transf_like
DYD3_k127_5186079_4	1353529.M899_0093	4.202e-96	323.0	COG1344@1|root,COG1344@2|Bacteria,1MV1N@1224|Proteobacteria,42MX8@68525|delta/epsilon subdivisions,2WJRC@28221|Deltaproteobacteria	28221|Deltaproteobacteria	N	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella	-	-	-	ko:K02406	ko02020,ko02040,ko04621,ko04626,ko05132,ko05134,map02020,map02040,map04621,map04626,map05132,map05134	-	-	-	ko00000,ko00001,ko02035	-	-	-	Flagellin_C,Flagellin_IN,Flagellin_N
DYD3_k127_5186079_11	1353529.M899_0096	1.167e-45	174.0	COG2908@1|root,COG2908@2|Bacteria,1N3U7@1224|Proteobacteria,42WA3@68525|delta/epsilon subdivisions,2MT78@213481|Bdellovibrionales,2WSEN@28221|Deltaproteobacteria	213481|Bdellovibrionales	S	Calcineurin-like phosphoesterase	lpxH	-	3.6.1.54	ko:K03269	ko00540,ko01100,map00540,map01100	M00060	R04549	RC00002	ko00000,ko00001,ko00002,ko01000,ko01005	-	-	-	Metallophos,Metallophos_2
DYD3_k127_5186079_2	862908.BMS_0085	6.937e-135	448.0	COG0497@1|root,COG0497@2|Bacteria,1MUNP@1224|Proteobacteria,42N50@68525|delta/epsilon subdivisions,2MSVE@213481|Bdellovibrionales,2WJ23@28221|Deltaproteobacteria	213481|Bdellovibrionales	L	May be involved in recombinational repair of damaged DNA	recN	-	-	ko:K03631	-	-	-	-	ko00000,ko03400	-	-	-	AAA_23,SMC_N
DYD3_k127_5186079_6	862908.BMS_0086	4.299e-81	280.0	COG0061@1|root,COG0061@2|Bacteria,1MUBC@1224|Proteobacteria,42MP8@68525|delta/epsilon subdivisions,2MT20@213481|Bdellovibrionales,2WKMR@28221|Deltaproteobacteria	213481|Bdellovibrionales	F	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP	nadK	-	2.7.1.23	ko:K00858	ko00760,ko01100,map00760,map01100	-	R00104	RC00002,RC00078	ko00000,ko00001,ko01000	-	-	-	NAD_kinase
DYD3_k127_5186079_12	862908.BMS_0087	4.907e-43	160.0	COG0745@1|root,COG0745@2|Bacteria,1QV6R@1224|Proteobacteria,42R2N@68525|delta/epsilon subdivisions,2MUFC@213481|Bdellovibrionales,2X2ZV@28221|Deltaproteobacteria	213481|Bdellovibrionales	T	Response regulator receiver domain	-	-	-	ko:K03413	ko02020,ko02030,map02020,map02030	M00506	-	-	ko00000,ko00001,ko00002,ko02022,ko02035	-	-	-	Response_reg
DYD3_k127_5186079_8	1201290.M902_1393	2.373e-62	235.0	COG4191@1|root,COG4191@2|Bacteria,1PEYR@1224|Proteobacteria,42WRV@68525|delta/epsilon subdivisions	1224|Proteobacteria	T	His Kinase A (phosphoacceptor) domain	-	-	-	-	-	-	-	-	-	-	-	-	HATPase_c
DYD3_k127_5186079_18	1201290.M902_1391	1.727e-06	60.0	COG0859@1|root,COG0859@2|Bacteria,1R6UD@1224|Proteobacteria,42PHZ@68525|delta/epsilon subdivisions,2MUJB@213481|Bdellovibrionales,2WIS6@28221|Deltaproteobacteria	213481|Bdellovibrionales	M	PFAM glycosyl transferase family 9	-	-	-	-	-	-	-	-	-	-	-	-	Glyco_transf_9
DYD3_k127_5186079_9	1353529.M899_0106	1.374e-58	205.0	COG1516@1|root,COG1516@2|Bacteria,1PSYY@1224|Proteobacteria,42V8K@68525|delta/epsilon subdivisions,2MT7V@213481|Bdellovibrionales,2WRH1@28221|Deltaproteobacteria	213481|Bdellovibrionales	N	PFAM flagellar protein FliS	fliS	-	-	ko:K02422	ko02040,map02040	-	-	-	ko00000,ko00001,ko02035	-	-	-	FliS
DYD3_k127_5186079_0	1201288.M900_0171	1.146e-166	535.0	COG1345@1|root,COG1345@2|Bacteria,1MUVP@1224|Proteobacteria,42MHW@68525|delta/epsilon subdivisions,2MSQZ@213481|Bdellovibrionales,2WNU5@28221|Deltaproteobacteria	213481|Bdellovibrionales	N	Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end	fliD	-	-	ko:K02407	ko02040,map02040	-	-	-	ko00000,ko00001,ko02035	-	-	-	Flagellin_IN,FliD_C,FliD_N
DYD3_k127_5186079_13	1201288.M900_0383	9.704e-41	161.0	COG0483@1|root,COG0483@2|Bacteria	2|Bacteria	G	inositol monophosphate 1-phosphatase activity	suhB	-	3.1.3.25,3.1.3.7	ko:K01082,ko:K01092	ko00521,ko00562,ko00920,ko01100,ko01120,ko01130,ko04070,map00521,map00562,map00920,map01100,map01120,map01130,map04070	M00131	R00188,R00508,R01185,R01186,R01187	RC00078	ko00000,ko00001,ko00002,ko01000,ko03016	-	-	-	Inositol_P
DYD3_k127_5221359_9	391625.PPSIR1_26373	9.454e-106	357.0	COG2124@1|root,COG2175@1|root,COG2124@2|Bacteria,COG2175@2|Bacteria	2|Bacteria	Q	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	pvcB	-	-	ko:K15468	-	-	-	-	ko00000,ko01008	-	-	-	TauD,p450
DYD3_k127_5221359_22	1123035.ARLA01000026_gene144	1.287e-31	132.0	2F3VK@1|root,33WMT@2|Bacteria,4P3P7@976|Bacteroidetes	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_5221359_2	1184267.A11Q_247	5.182e-306	946.0	COG1061@1|root,COG1061@2|Bacteria,1MV9F@1224|Proteobacteria,42NS1@68525|delta/epsilon subdivisions,2MSRQ@213481|Bdellovibrionales,2WQXY@28221|Deltaproteobacteria	213481|Bdellovibrionales	L	Type III restriction protein res subunit	-	-	-	ko:K19789	-	-	-	-	ko00000,ko03400	-	-	-	Helicase_C,ResIII,UPF0547
DYD3_k127_5221359_25	1173025.GEI7407_1885	5.719e-16	89.0	COG4638@1|root,COG4638@2|Bacteria,1G4PW@1117|Cyanobacteria,1HCQP@1150|Oscillatoriales	1117|Cyanobacteria	P	large terminal subunit'	-	-	1.14.15.7	ko:K00479,ko:K00499	ko00260,map00260	-	R07409	RC00087	ko00000,ko00001,ko01000	-	-	-	Rieske,Ring_hydroxyl_A
DYD3_k127_5221359_17	1122164.JHWF01000007_gene1130	1.041e-43	168.0	COG0625@1|root,COG0625@2|Bacteria,1MX33@1224|Proteobacteria,1S4KF@1236|Gammaproteobacteria,1JDCY@118969|Legionellales	118969|Legionellales	O	Glutathione S-transferase, C-terminal domain	-	-	-	-	-	-	-	-	-	-	-	-	GST_C_6,GST_N_4
DYD3_k127_5221359_21	1173023.KE650771_gene329	2.261e-33	143.0	COG0654@1|root,COG0654@2|Bacteria,1G27V@1117|Cyanobacteria,1JGY3@1189|Stigonemataceae	1117|Cyanobacteria	CH	Monooxygenase fad-binding protein	-	-	-	-	-	-	-	-	-	-	-	-	FAD_binding_3
DYD3_k127_5221359_23	1408445.JHXP01000025_gene549	1.54e-29	129.0	2APP4@1|root,31ESR@2|Bacteria,1QC43@1224|Proteobacteria,1T7SN@1236|Gammaproteobacteria,1JFSI@118969|Legionellales	118969|Legionellales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_5221359_16	1123239.KB898627_gene3521	3.426e-46	182.0	COG2124@1|root,COG2124@2|Bacteria,1TSC5@1239|Firmicutes,4HBG5@91061|Bacilli	91061|Bacilli	Q	Belongs to the cytochrome P450 family	-	-	-	-	-	-	-	-	-	-	-	-	p450
DYD3_k127_5221359_13	1353529.M899_0513	9.965e-67	237.0	COG0583@1|root,COG0583@2|Bacteria,1RM34@1224|Proteobacteria,42ZZM@68525|delta/epsilon subdivisions,2MTZY@213481|Bdellovibrionales,2WVBE@28221|Deltaproteobacteria	213481|Bdellovibrionales	K	LysR substrate binding domain	-	-	-	-	-	-	-	-	-	-	-	-	HTH_1,LysR_substrate
DYD3_k127_5221359_7	926549.KI421517_gene3793	8.214e-118	390.0	COG0738@1|root,COG0738@2|Bacteria,4NFHM@976|Bacteroidetes,47JNK@768503|Cytophagia	976|Bacteroidetes	G	PFAM Major Facilitator Superfamily	-	-	-	-	-	-	-	-	-	-	-	-	MFS_1
DYD3_k127_5221359_4	264462.Bd1572	3.289e-172	563.0	COG4774@1|root,COG4774@2|Bacteria,1NMCN@1224|Proteobacteria,43C9C@68525|delta/epsilon subdivisions,2X7JT@28221|Deltaproteobacteria	28221|Deltaproteobacteria	P	TonB-dependent Receptor Plug Domain	-	-	-	ko:K02014	-	-	-	-	ko00000,ko02000	1.B.14	-	-	Plug,TonB_dep_Rec
DYD3_k127_5221359_20	1144305.PMI02_04406	2.077e-37	151.0	2CMA0@1|root,32SE3@2|Bacteria,1P14X@1224|Proteobacteria	1224|Proteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_5221359_24	1112217.PPL19_04050	1.597e-19	98.0	arCOG09511@1|root,2Z9DH@2|Bacteria,1N34W@1224|Proteobacteria	1224|Proteobacteria	S	FRG	-	-	-	-	-	-	-	-	-	-	-	-	FRG
DYD3_k127_5221359_1	1224318.DT73_00590	1.336e-308	974.0	COG1196@1|root,COG1196@2|Bacteria,1PRIC@1224|Proteobacteria,1RZK5@1236|Gammaproteobacteria	1236|Gammaproteobacteria	D	(ABC) transporter	-	-	-	-	-	-	-	-	-	-	-	-	PHP_C
DYD3_k127_5221359_8	375286.mma_1689	4.065e-106	351.0	COG0583@1|root,COG0583@2|Bacteria,1PR6U@1224|Proteobacteria,2VNDA@28216|Betaproteobacteria,474P8@75682|Oxalobacteraceae	28216|Betaproteobacteria	K	LysR substrate binding domain	-	-	-	-	-	-	-	-	-	-	-	-	HTH_1,LysR_substrate
DYD3_k127_5221359_12	375286.mma_1688	3.31e-85	289.0	COG0666@1|root,COG0666@2|Bacteria,1N952@1224|Proteobacteria,2VQ59@28216|Betaproteobacteria,474AS@75682|Oxalobacteraceae	28216|Betaproteobacteria	S	Ankyrin repeats (many copies)	-	-	-	ko:K06867	-	-	-	-	ko00000	-	-	-	Ank_2,Ank_4
DYD3_k127_5221359_14	264462.Bd3715	2.328e-64	225.0	COG2249@1|root,COG2249@2|Bacteria,1RA5X@1224|Proteobacteria,42R0Z@68525|delta/epsilon subdivisions,2MU35@213481|Bdellovibrionales,2WMNE@28221|Deltaproteobacteria	213481|Bdellovibrionales	S	PFAM NAD(P)H dehydrogenase (quinone)	-	-	-	-	-	-	-	-	-	-	-	-	Flavodoxin_2
DYD3_k127_5221359_19	264462.Bd3718	1.32e-37	148.0	COG1309@1|root,COG1309@2|Bacteria,1MUUY@1224|Proteobacteria,42VQ5@68525|delta/epsilon subdivisions,2MU4F@213481|Bdellovibrionales,2WSX2@28221|Deltaproteobacteria	213481|Bdellovibrionales	K	WHG domain	-	-	-	-	-	-	-	-	-	-	-	-	TetR_N,WHG
DYD3_k127_5221359_18	862908.BMS_1397	1.2e-41	162.0	COG2836@1|root,COG2836@2|Bacteria,1RIGJ@1224|Proteobacteria,42Q44@68525|delta/epsilon subdivisions,2MTD9@213481|Bdellovibrionales,2WNN8@28221|Deltaproteobacteria	213481|Bdellovibrionales	S	Cytochrome C biogenesis protein transmembrane region	-	-	-	ko:K09792	-	-	-	-	ko00000	-	-	-	DsbD_2
DYD3_k127_5221359_5	1201288.M900_1273	1.572e-146	478.0	COG0348@1|root,COG0348@2|Bacteria,1MVFY@1224|Proteobacteria,42M8Q@68525|delta/epsilon subdivisions,2MSRS@213481|Bdellovibrionales,2WNZJ@28221|Deltaproteobacteria	213481|Bdellovibrionales	C	4Fe-4S dicluster domain	ccoG	-	-	-	-	-	-	-	-	-	-	-	Fer4_18,Fer4_5,FixG_C
DYD3_k127_5221359_15	1201288.M900_1272	9.081e-56	203.0	COG2010@1|root,COG2010@2|Bacteria,1Q1J4@1224|Proteobacteria,42X3D@68525|delta/epsilon subdivisions,2MT8H@213481|Bdellovibrionales,2WSZH@28221|Deltaproteobacteria	213481|Bdellovibrionales	C	N-terminal domain of cytochrome oxidase-cbb3, FixP	-	-	-	ko:K00406	ko00190,ko01100,ko02020,map00190,map01100,map02020	M00156	-	-	ko00000,ko00001,ko00002	3.D.4.3	-	-	Cytochrome_CBB3,FixP_N
DYD3_k127_5221359_30	399795.CtesDRAFT_PD3054	0.000729	44.0	COG4736@1|root,COG4736@2|Bacteria,1NAVM@1224|Proteobacteria,2VX7I@28216|Betaproteobacteria,4AFC8@80864|Comamonadaceae	28216|Betaproteobacteria	O	Cbb3-type cytochrome oxidase	-	-	-	ko:K00407	ko00190,ko01100,ko02020,map00190,map01100,map02020	M00156	-	-	ko00000,ko00001,ko00002	3.D.4.3	-	-	FixQ
DYD3_k127_5221359_0	1201288.M900_1270	0.0	1073.0	COG2993@1|root,COG3278@1|root,COG2993@2|Bacteria,COG3278@2|Bacteria,1MU18@1224|Proteobacteria,42M5M@68525|delta/epsilon subdivisions,2MSPA@213481|Bdellovibrionales,2WM27@28221|Deltaproteobacteria	213481|Bdellovibrionales	C	Belongs to the heme-copper respiratory oxidase family	-	-	1.9.3.1	ko:K00404,ko:K15862	ko00190,ko01100,ko02020,map00190,map01100,map02020	M00156	-	-	ko00000,ko00001,ko00002,ko01000	3.D.4.3	-	-	COX1,FixO
DYD3_k127_5221359_28	1201288.M900_1269	2.79e-09	61.0	COG3197@1|root,COG3197@2|Bacteria,1PUQX@1224|Proteobacteria,433SW@68525|delta/epsilon subdivisions,2WYFW@28221|Deltaproteobacteria	28221|Deltaproteobacteria	P	cytochrome oxidase maturation protein cbb3-type	ccoS	-	-	-	-	-	-	-	-	-	-	-	FixS
DYD3_k127_5221359_3	1353529.M899_0375	8.364e-190	618.0	COG2217@1|root,COG2217@2|Bacteria,1MU08@1224|Proteobacteria,42M2R@68525|delta/epsilon subdivisions,2MSPQ@213481|Bdellovibrionales,2WUJ6@28221|Deltaproteobacteria	213481|Bdellovibrionales	P	E1-E2 ATPase	-	-	3.6.3.4,3.6.3.54	ko:K01533,ko:K17686	ko01524,ko04016,map01524,map04016	-	R00086	RC00002	ko00000,ko00001,ko01000	3.A.3.5	-	-	ATPase-cat_bd,E1-E2_ATPase,Hydrolase
DYD3_k127_5221359_11	1353529.M899_0372	1.402e-99	330.0	COG0664@1|root,COG0664@2|Bacteria,1MZZD@1224|Proteobacteria,42QUX@68525|delta/epsilon subdivisions,2MT5W@213481|Bdellovibrionales,2WMWV@28221|Deltaproteobacteria	213481|Bdellovibrionales	K	PFAM Cyclic nucleotide-binding	-	-	-	ko:K10914	ko02020,ko02024,ko02025,ko02026,ko05111,map02020,map02024,map02025,map02026,map05111	-	-	-	ko00000,ko00001,ko03000	-	-	-	HTH_Crp_2,cNMP_binding
DYD3_k127_5221359_27	1201288.M900_1266	2.72e-11	68.0	COG0664@1|root,COG0664@2|Bacteria	2|Bacteria	T	cyclic nucleotide binding	-	-	-	ko:K10914	ko02020,ko02024,ko02025,ko02026,ko05111,map02020,map02024,map02025,map02026,map05111	-	-	-	ko00000,ko00001,ko03000	-	-	-	Abi,HTH_Crp_2,PrsW-protease,cNMP_binding
DYD3_k127_5221359_26	1353529.M899_0374	1.562e-13	77.0	COG0589@1|root,COG0589@2|Bacteria	2|Bacteria	T	AMP binding	-	-	-	-	-	-	-	-	-	-	-	-	Usp
DYD3_k127_5221359_29	1519464.HY22_13385	0.0001579	50.0	COG0589@1|root,COG0589@2|Bacteria,1FDX7@1090|Chlorobi	1090|Chlorobi	T	PFAM UspA domain protein	-	-	-	ko:K06149	-	-	-	-	ko00000	-	-	-	Usp
DYD3_k127_5221359_6	1121904.ARBP01000002_gene6745	4.892e-120	395.0	COG0664@1|root,COG0745@1|root,COG0664@2|Bacteria,COG0745@2|Bacteria,4NFB1@976|Bacteroidetes,47JY7@768503|Cytophagia	976|Bacteroidetes	K	Transcriptional regulator, Crp Fnr family	-	-	-	-	-	-	-	-	-	-	-	-	HTH_Crp_2,Response_reg,cNMP_binding
DYD3_k127_5221359_10	1237149.C900_01991	7.306e-104	351.0	COG0642@1|root,COG2205@2|Bacteria,4NG0Y@976|Bacteroidetes,47JUV@768503|Cytophagia	976|Bacteroidetes	T	Histidine kinase	-	-	-	-	-	-	-	-	-	-	-	-	GAF_2,HATPase_c,HisKA,PAS,PAS_3,PAS_9
DYD3_k127_522454_3	1144275.COCOR_07930	6.104e-12	74.0	COG3000@1|root,COG3000@2|Bacteria,1R4RM@1224|Proteobacteria,43F3R@68525|delta/epsilon subdivisions,2X3A7@28221|Deltaproteobacteria,2YV37@29|Myxococcales	28221|Deltaproteobacteria	I	fatty acid hydroxylase	-	-	-	-	-	-	-	-	-	-	-	-	FA_hydroxylase
DYD3_k127_522454_2	765912.Thimo_2519	8.947e-16	89.0	COG4591@1|root,COG4591@2|Bacteria,1R4Q2@1224|Proteobacteria,1RQW0@1236|Gammaproteobacteria,1X1HR@135613|Chromatiales	135613|Chromatiales	M	ABC-type transport system, involved in lipoprotein release, permease component	-	-	-	-	-	-	-	-	-	-	-	-	FtsX,MacB_PCD
DYD3_k127_522454_4	1408473.JHXO01000010_gene3546	1.862e-11	76.0	COG4591@1|root,COG4591@2|Bacteria,4NHBR@976|Bacteroidetes,2FSNX@200643|Bacteroidia	976|Bacteroidetes	M	FtsX-like permease family	-	-	-	-	-	-	-	-	-	-	-	-	FtsX,MacB_PCD
DYD3_k127_522454_6	398512.JQKC01000016_gene2751	1.544e-06	58.0	COG0671@1|root,COG0671@2|Bacteria,1V2ZH@1239|Firmicutes,24HRY@186801|Clostridia,3WJUP@541000|Ruminococcaceae	186801|Clostridia	I	Psort location CytoplasmicMembrane, score	-	-	-	-	-	-	-	-	-	-	-	-	PAP2,PAP2_3
DYD3_k127_522454_0	1353529.M899_2706	1.406e-52	192.0	COG4122@1|root,COG4122@2|Bacteria,1N62B@1224|Proteobacteria,43BAH@68525|delta/epsilon subdivisions,2MT8G@213481|Bdellovibrionales,2X6PQ@28221|Deltaproteobacteria	213481|Bdellovibrionales	S	O-methyltransferase	-	-	2.1.1.104	ko:K00588	ko00360,ko00940,ko00941,ko00945,ko01100,ko01110,map00360,map00940,map00941,map00945,map01100,map01110	M00039,M00350	R01942,R06578	RC00003,RC00392	ko00000,ko00001,ko00002,ko01000	-	-	-	Methyltransf_3
DYD3_k127_522454_1	946077.W5A_02780	4.838e-30	128.0	COG0084@1|root,COG0084@2|Bacteria,4NSGW@976|Bacteroidetes,1I2AW@117743|Flavobacteriia	976|Bacteroidetes	L	hydrolase, TatD	-	-	-	ko:K03424	-	-	-	-	ko00000,ko01000	-	-	-	TatD_DNase
DYD3_k127_522454_5	1206730.BAGA01000139_gene3361	1.028e-08	58.0	COG1403@1|root,COG1403@2|Bacteria	2|Bacteria	V	endonuclease activity	-	-	-	-	-	-	-	-	-	-	-	-	DUF222,HNH,HNH_5
DYD3_k127_5257207_5	862908.BMS_1876	8.472e-24	108.0	2A8H6@1|root,30XJ8@2|Bacteria,1P5C2@1224|Proteobacteria,4333S@68525|delta/epsilon subdivisions,2WY41@28221|Deltaproteobacteria	28221|Deltaproteobacteria	S	Endonuclease/Exonuclease/phosphatase family	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_5257207_1	1121896.JMLU01000001_gene1015	2.395e-154	497.0	COG0436@1|root,COG0436@2|Bacteria,4NENS@976|Bacteroidetes,1HYA7@117743|Flavobacteriia,2NSGC@237|Flavobacterium	976|Bacteroidetes	E	Aminotransferase	aspC	-	2.6.1.1	ko:K00812	ko00220,ko00250,ko00270,ko00330,ko00350,ko00360,ko00400,ko00401,ko00950,ko00960,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map00250,map00270,map00330,map00350,map00360,map00400,map00401,map00950,map00960,map01100,map01110,map01130,map01210,map01230	-	R00355,R00694,R00734,R00896,R02433,R02619,R05052	RC00006	ko00000,ko00001,ko01000,ko01007	-	-	-	Aminotran_1_2
DYD3_k127_5257207_0	1332071.L581_0055	4.6e-198	626.0	COG0114@1|root,COG0114@2|Bacteria,1MUQI@1224|Proteobacteria,1RNUS@1236|Gammaproteobacteria,401IH@613|Serratia	1236|Gammaproteobacteria	C	Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate	fumC	GO:0003674,GO:0003824,GO:0004333,GO:0006082,GO:0006091,GO:0006099,GO:0006101,GO:0006106,GO:0006108,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0009060,GO:0009987,GO:0015980,GO:0016829,GO:0016835,GO:0016836,GO:0016999,GO:0017144,GO:0019752,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044281,GO:0045333,GO:0050896,GO:0055114,GO:0071704,GO:0072350	4.2.1.2	ko:K01679	ko00020,ko00620,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko04934,ko05200,ko05211,map00020,map00620,map00720,map01100,map01110,map01120,map01130,map01200,map04934,map05200,map05211	M00009,M00011,M00173,M00376	R01082	RC00443	ko00000,ko00001,ko00002,ko01000	-	-	-	FumaraseC_C,Lyase_1
DYD3_k127_5257207_3	862908.BMS_1102	1.201e-44	166.0	COG4539@1|root,COG4539@2|Bacteria,1N1G8@1224|Proteobacteria,4313I@68525|delta/epsilon subdivisions,2MTBP@213481|Bdellovibrionales,2WWG1@28221|Deltaproteobacteria	213481|Bdellovibrionales	S	Protein of unknown function (DUF962)	-	-	-	-	-	-	-	-	-	-	-	-	DUF962
DYD3_k127_5257207_4	1122194.AUHU01000026_gene85	7.768e-26	112.0	COG2303@1|root,COG2303@2|Bacteria,1RH5U@1224|Proteobacteria,1S60X@1236|Gammaproteobacteria,467QF@72275|Alteromonadaceae	1236|Gammaproteobacteria	E	Involved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine at the same rate	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_5257207_2	1449357.JQLK01000001_gene145	5.401e-55	216.0	COG2366@1|root,COG2366@2|Bacteria,1WJ3J@1297|Deinococcus-Thermus	1297|Deinococcus-Thermus	S	peptidase S45, penicillin amidase	-	-	3.5.1.11	ko:K01434	ko00311,ko01130,map00311,map01130	-	R02170	RC00166,RC00328	ko00000,ko00001,ko01000,ko01002	-	-	-	Penicil_amidase
DYD3_k127_526061_22	1190606.AJYG01000173_gene568	3.097e-27	119.0	COG1357@1|root,COG1357@2|Bacteria,1REAS@1224|Proteobacteria,1S4BN@1236|Gammaproteobacteria,1Y2RR@135623|Vibrionales	135623|Vibrionales	S	Pentapeptide repeats (9 copies)	-	-	-	-	-	-	-	-	-	-	-	-	Pentapeptide_4
DYD3_k127_526061_14	616991.JPOO01000003_gene650	1.5e-42	160.0	COG1917@1|root,COG1917@2|Bacteria,4NS3U@976|Bacteroidetes,1I3FI@117743|Flavobacteriia,23IBR@178469|Arenibacter	976|Bacteroidetes	S	Domain of unknown function (DUF4437)	-	-	-	-	-	-	-	-	-	-	-	-	Cupin_2,DUF4437
DYD3_k127_526061_26	395963.Bind_1867	3.414e-22	106.0	2C3WA@1|root,2Z8P1@2|Bacteria,1R8VC@1224|Proteobacteria,2U8X3@28211|Alphaproteobacteria,3NBFS@45404|Beijerinckiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_526061_10	1184267.A11Q_1148	7.211e-51	184.0	COG0454@1|root,COG0454@2|Bacteria,1N32E@1224|Proteobacteria	1224|Proteobacteria	K	COG0454 Histone acetyltransferase HPA2 and related acetyltransferases	-	-	-	-	-	-	-	-	-	-	-	-	Acetyltransf_1,Acetyltransf_10,Acetyltransf_7
DYD3_k127_526061_0	391600.ABRU01000019_gene1358	4.531e-135	440.0	COG3503@1|root,COG3503@2|Bacteria,1QQ9D@1224|Proteobacteria,2U283@28211|Alphaproteobacteria,2KK4W@204458|Caulobacterales	204458|Caulobacterales	S	Protein of unknown function (DUF1624)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1624
DYD3_k127_526061_24	1397528.Q671_14525	1.663e-24	106.0	COG2076@1|root,COG2076@2|Bacteria,1MZ54@1224|Proteobacteria,1S8SG@1236|Gammaproteobacteria,1XKHJ@135619|Oceanospirillales	135619|Oceanospirillales	P	multi-drug	emrE	-	-	ko:K03297	-	-	-	-	ko00000,ko02000	2.A.7.1	-	-	Multi_Drug_Res
DYD3_k127_526061_19	1200792.AKYF01000019_gene4513	1.206e-32	137.0	COG0330@1|root,COG0330@2|Bacteria,1UZJK@1239|Firmicutes,4HGVU@91061|Bacilli,26RE7@186822|Paenibacillaceae	91061|Bacilli	O	HflC protein	-	-	-	-	-	-	-	-	-	-	-	-	Band_7
DYD3_k127_526061_25	471854.Dfer_0513	8.799e-23	107.0	arCOG09511@1|root,2Z9DH@2|Bacteria,4NIMU@976|Bacteroidetes,47N8K@768503|Cytophagia	976|Bacteroidetes	S	FRG	-	-	-	-	-	-	-	-	-	-	-	-	FRG
DYD3_k127_526061_15	1145276.T479_18610	1.879e-40	163.0	2CK7E@1|root,32SBR@2|Bacteria,1VA0Q@1239|Firmicutes,4HVGB@91061|Bacilli	91061|Bacilli	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_526061_8	1449065.JMLL01000010_gene430	2.771e-60	212.0	COG3832@1|root,COG3832@2|Bacteria,1RD0P@1224|Proteobacteria,2U79U@28211|Alphaproteobacteria,43P8U@69277|Phyllobacteriaceae	28211|Alphaproteobacteria	S	Activator of Hsp90 ATPase	-	-	-	-	-	-	-	-	-	-	-	-	AHSA1
DYD3_k127_526061_13	1353529.M899_2453	8.119e-43	162.0	2DP6I@1|root,330RD@2|Bacteria,1NBSP@1224|Proteobacteria,431S3@68525|delta/epsilon subdivisions,2MU74@213481|Bdellovibrionales,2WW92@28221|Deltaproteobacteria	213481|Bdellovibrionales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_526061_23	1254432.SCE1572_34775	3.207e-26	114.0	COG1670@1|root,COG1670@2|Bacteria,1MZ99@1224|Proteobacteria	1224|Proteobacteria	J	Acetyltransferase (GNAT) domain	-	-	-	-	-	-	-	-	-	-	-	-	Acetyltransf_1
DYD3_k127_526061_17	264462.Bd0515	1.89e-38	147.0	COG3189@1|root,COG3189@2|Bacteria,1MZ7H@1224|Proteobacteria,42U37@68525|delta/epsilon subdivisions,2WQ9M@28221|Deltaproteobacteria	28221|Deltaproteobacteria	S	Protein of unknown function, DUF488	-	-	-	-	-	-	-	-	-	-	-	-	DUF488
DYD3_k127_526061_4	1184267.A11Q_67	4.241e-69	240.0	COG2885@1|root,COG2885@2|Bacteria,1MYBP@1224|Proteobacteria,42PIF@68525|delta/epsilon subdivisions,2MTJJ@213481|Bdellovibrionales,2WMSZ@28221|Deltaproteobacteria	213481|Bdellovibrionales	M	Belongs to the ompA family	-	-	-	-	-	-	-	-	-	-	-	-	Gly-zipper_Omp,Gly-zipper_YMGG,OmpA
DYD3_k127_526061_18	1184267.A11Q_1487	3.462e-35	151.0	COG4191@1|root,COG4191@2|Bacteria,1RCM9@1224|Proteobacteria,42MC4@68525|delta/epsilon subdivisions,2MSXW@213481|Bdellovibrionales,2WIZU@28221|Deltaproteobacteria	213481|Bdellovibrionales	T	Histidine kinase A domain protein	-	-	-	-	-	-	-	-	-	-	-	-	ABC_sub_bind,HATPase_c,HisKA,PAS_3,PAS_4,PAS_9,Response_reg
DYD3_k127_526061_11	765869.BDW_09560	1.173e-50	194.0	COG3213@1|root,COG3213@2|Bacteria,1Q61U@1224|Proteobacteria,4328M@68525|delta/epsilon subdivisions,2MUD9@213481|Bdellovibrionales,2WXFV@28221|Deltaproteobacteria	213481|Bdellovibrionales	P	NnrS protein	-	-	-	ko:K07234	-	-	-	-	ko00000	-	-	-	NnrS
DYD3_k127_526061_27	398767.Glov_1807	0.0004125	51.0	COG0745@1|root,COG0745@2|Bacteria,1N7TJ@1224|Proteobacteria,42MTC@68525|delta/epsilon subdivisions,2X5G6@28221|Deltaproteobacteria,43W2F@69541|Desulfuromonadales	28221|Deltaproteobacteria	K	Transcriptional regulatory protein, C terminal	-	-	-	-	-	-	-	-	-	-	-	-	Response_reg,Trans_reg_C
DYD3_k127_526061_5	264462.Bd3212	2.652e-68	244.0	COG2602@1|root,COG2602@2|Bacteria,1NWXE@1224|Proteobacteria,42QWH@68525|delta/epsilon subdivisions,2WR66@28221|Deltaproteobacteria	28221|Deltaproteobacteria	M	PFAM penicillin-binding protein transpeptidase	-	-	3.5.2.6	ko:K17838	ko01501,map01501	-	R06363	RC01499	ko00000,ko00001,ko01000	-	-	-	Transpeptidase
DYD3_k127_526061_20	205922.Pfl01_3728	5.435e-30	124.0	COG0454@1|root,COG0454@2|Bacteria,1QWJ5@1224|Proteobacteria,1T34G@1236|Gammaproteobacteria	1236|Gammaproteobacteria	K	Acetyltransferase (GNAT) domain	-	-	-	-	-	-	-	-	-	-	-	-	Acetyltransf_1,Acetyltransf_7
DYD3_k127_526061_1	613026.HRAG_02204	8.428e-99	330.0	COG0788@1|root,COG0788@2|Bacteria,1MVCF@1224|Proteobacteria,42MPM@68525|delta/epsilon subdivisions,2YMX5@29547|Epsilonproteobacteria	29547|Epsilonproteobacteria	F	Catalyzes the hydrolysis of 10-formyltetrahydrofolate (formyl-FH4) to formate and tetrahydrofolate (FH4)	purU	-	3.5.1.10	ko:K01433	ko00630,ko00670,map00630,map00670	-	R00944	RC00026,RC00111	ko00000,ko00001,ko01000	-	-	-	ACT,Formyl_trans_N
DYD3_k127_526061_7	1229172.JQFA01000002_gene4760	4.865e-65	226.0	COG0262@1|root,COG0262@2|Bacteria,1GD9G@1117|Cyanobacteria	1117|Cyanobacteria	H	RibD C-terminal domain	-	-	-	-	-	-	-	-	-	-	-	-	RibD_C
DYD3_k127_526061_3	760192.Halhy_4853	1.551e-73	257.0	COG4874@1|root,COG4874@2|Bacteria,4NFG3@976|Bacteroidetes,1IQ05@117747|Sphingobacteriia	976|Bacteroidetes	S	Amidinotransferase	-	-	-	-	-	-	-	-	-	-	-	-	Amidinotransf
DYD3_k127_526061_6	1131812.JQMS01000001_gene3098	4.128e-68	235.0	COG0110@1|root,COG0110@2|Bacteria,4NNJQ@976|Bacteroidetes,1IIUE@117743|Flavobacteriia,2NUBJ@237|Flavobacterium	976|Bacteroidetes	S	Maltose acetyltransferase	-	-	2.3.1.79	ko:K00661	-	-	-	-	ko00000,ko01000	-	-	-	Hexapep,Hexapep_2,Mac
DYD3_k127_526061_16	765869.BDW_09600	5.61e-39	165.0	COG0729@1|root,COG0729@2|Bacteria	2|Bacteria	M	surface antigen	-	-	-	ko:K07278	-	-	-	-	ko00000,ko02000	1.B.33.2.4	-	-	Bac_surface_Ag,POTRA,Peptidase_S74
DYD3_k127_526061_21	765869.BDW_09605	1.544e-27	130.0	COG2911@1|root,COG2911@2|Bacteria	2|Bacteria	S	protein secretion	-	-	-	ko:K09800	-	-	-	-	ko00000,ko02000	-	-	-	TamB
DYD3_k127_526061_2	1042163.BRLA_c021900	7.43e-94	316.0	COG0697@1|root,COG0697@2|Bacteria,1TR6G@1239|Firmicutes,4HAMD@91061|Bacilli,26U0Z@186822|Paenibacillaceae	91061|Bacilli	EG	Transporter	ypaH	-	-	-	-	-	-	-	-	-	-	-	EamA
DYD3_k127_526061_9	1278073.MYSTI_06733	4.489e-60	222.0	COG0642@1|root,COG2205@2|Bacteria,1RKH1@1224|Proteobacteria,43BZT@68525|delta/epsilon subdivisions,2WV6C@28221|Deltaproteobacteria	28221|Deltaproteobacteria	T	Histidine kinase	-	-	-	-	-	-	-	-	-	-	-	-	HATPase_c,HisKA
DYD3_k127_5262263_16	264462.Bd0084	1.183e-10	71.0	COG3271@1|root,COG3271@2|Bacteria,1QY1B@1224|Proteobacteria,431C9@68525|delta/epsilon subdivisions,2MUB8@213481|Bdellovibrionales,2WWV7@28221|Deltaproteobacteria	213481|Bdellovibrionales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_5262263_18	1321779.HMPREF1984_01486	9.186e-06	53.0	COG3042@1|root,COG3042@2|Bacteria	2|Bacteria	-	-	yoaF	-	-	ko:K09712	-	-	-	-	ko00000	-	-	-	DUF333
DYD3_k127_5262263_7	1353529.M899_2025	3.791e-83	285.0	COG3093@1|root,COG3093@2|Bacteria	2|Bacteria	K	addiction module antidote protein HigA	-	-	-	ko:K07110,ko:K21686	-	-	-	-	ko00000,ko03000	-	-	-	DUF2083,DUF4423,HTH_3,HTH_31,Peptidase_M78
DYD3_k127_5262263_11	686340.Metal_3157	3.135e-44	164.0	COG3631@1|root,COG3631@2|Bacteria,1RH08@1224|Proteobacteria,1S4RF@1236|Gammaproteobacteria,1XF90@135618|Methylococcales	135618|Methylococcales	S	SnoaL-like polyketide cyclase	-	-	-	-	-	-	-	-	-	-	-	-	SnoaL_2
DYD3_k127_5262263_2	765869.BDW_05775	8.728e-126	407.0	COG0627@1|root,COG0627@2|Bacteria,1MUID@1224|Proteobacteria,42TGB@68525|delta/epsilon subdivisions,2MTUH@213481|Bdellovibrionales,2WQYS@28221|Deltaproteobacteria	213481|Bdellovibrionales	S	Serine hydrolase involved in the detoxification of formaldehyde	fghA	-	3.1.2.12	ko:K01070,ko:K09795	ko00680,ko01120,ko01200,map00680,map01120,map01200	-	R00527	RC00167,RC00320	ko00000,ko00001,ko01000	-	CE1	-	DUF459,Esterase
DYD3_k127_5262263_0	765869.BDW_05780	1.601e-208	651.0	COG1062@1|root,COG1062@2|Bacteria,1MUK4@1224|Proteobacteria,42UEB@68525|delta/epsilon subdivisions,2MTUX@213481|Bdellovibrionales,2WR1X@28221|Deltaproteobacteria	213481|Bdellovibrionales	C	Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily	-	-	1.1.1.1,1.1.1.284	ko:K00121	ko00010,ko00071,ko00350,ko00625,ko00626,ko00680,ko00830,ko00980,ko00982,ko01100,ko01110,ko01120,ko01130,ko01200,ko01220,ko05204,map00010,map00071,map00350,map00625,map00626,map00680,map00830,map00980,map00982,map01100,map01110,map01120,map01130,map01200,map01220,map05204	-	R00623,R00754,R02124,R04880,R05233,R05234,R06917,R06927,R06983,R07105,R08281,R08306,R08310	RC00050,RC00087,RC00088,RC00099,RC00116,RC00649,RC01715,RC01734,RC02273	ko00000,ko00001,ko01000	-	-	-	ADH_N,ADH_zinc_N
DYD3_k127_5262263_3	264462.Bd0897	2.252e-122	399.0	COG0583@1|root,COG0583@2|Bacteria,1MW16@1224|Proteobacteria,42YY4@68525|delta/epsilon subdivisions,2MTQ0@213481|Bdellovibrionales,2WUN7@28221|Deltaproteobacteria	213481|Bdellovibrionales	K	LysR substrate binding domain	-	-	-	-	-	-	-	-	-	-	-	-	HTH_1,LysR_substrate
DYD3_k127_5262263_4	485915.Dret_0685	1.338e-109	370.0	COG1115@1|root,COG1115@2|Bacteria,1MUI3@1224|Proteobacteria,42MG1@68525|delta/epsilon subdivisions,2WKHE@28221|Deltaproteobacteria,2M86Y@213115|Desulfovibrionales	28221|Deltaproteobacteria	E	amino acid carrier protein	-	-	-	ko:K03310	-	-	-	-	ko00000	2.A.25	-	-	Na_Ala_symp
DYD3_k127_5262263_5	1156935.QWE_16053	2.105e-98	325.0	COG0693@1|root,COG0693@2|Bacteria,1MVTT@1224|Proteobacteria,2TT0C@28211|Alphaproteobacteria,4BC3M@82115|Rhizobiaceae	28211|Alphaproteobacteria	S	intracellular protease amidase	-	-	-	-	-	-	-	-	-	-	-	-	DJ-1_PfpI
DYD3_k127_5262263_6	862908.BMS_0960	5.321e-94	327.0	COG1502@1|root,COG1502@2|Bacteria,1MUDJ@1224|Proteobacteria,42M77@68525|delta/epsilon subdivisions,2MTBA@213481|Bdellovibrionales,2WM41@28221|Deltaproteobacteria	213481|Bdellovibrionales	I	Phospholipase D. Active site motifs.	-	-	-	ko:K06132	ko00564,ko01100,map00564,map01100	-	R11062	RC00017	ko00000,ko00001,ko01000	-	-	-	PLDc_2
DYD3_k127_5262263_10	264462.Bd0765	1.755e-47	174.0	COG2259@1|root,COG2259@2|Bacteria,1NCQT@1224|Proteobacteria,42WUM@68525|delta/epsilon subdivisions,2WT9R@28221|Deltaproteobacteria	28221|Deltaproteobacteria	S	DoxX	-	-	-	ko:K15977	-	-	-	-	ko00000	-	-	-	DoxX
DYD3_k127_5262263_9	1118235.CAJH01000034_gene2162	1.704e-50	191.0	COG3900@1|root,COG3900@2|Bacteria,1RKQP@1224|Proteobacteria,1SB83@1236|Gammaproteobacteria	1236|Gammaproteobacteria	S	Predicted periplasmic protein (DUF2092)	-	-	-	-	-	-	-	-	-	-	-	-	DUF2092
DYD3_k127_5262263_14	1144305.PMI02_03109	4.38e-30	123.0	2E8Y7@1|root,3337X@2|Bacteria,1NBJG@1224|Proteobacteria,2UW7G@28211|Alphaproteobacteria	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_5262263_1	264462.Bd1372	8.425e-140	456.0	COG0006@1|root,COG0006@2|Bacteria,1MUZS@1224|Proteobacteria,42M1K@68525|delta/epsilon subdivisions,2MSR1@213481|Bdellovibrionales,2WJRH@28221|Deltaproteobacteria	213481|Bdellovibrionales	E	Belongs to the peptidase M24B family	pepP	-	3.4.11.9	ko:K01262	-	-	-	-	ko00000,ko01000,ko01002	-	-	-	AMP_N,Peptidase_M24
DYD3_k127_5262263_13	862908.BMS_0679	2.785e-31	129.0	COG0526@1|root,COG0526@2|Bacteria,1P3KQ@1224|Proteobacteria,431Y2@68525|delta/epsilon subdivisions,2WWSS@28221|Deltaproteobacteria	28221|Deltaproteobacteria	O	Redoxin	-	-	-	-	-	-	-	-	-	-	-	-	Redoxin
DYD3_k127_5262263_15	1201290.M902_1951	7.03e-16	83.0	2DEBU@1|root,2ZM9Y@2|Bacteria,1P9A1@1224|Proteobacteria,432AU@68525|delta/epsilon subdivisions,2MUK7@213481|Bdellovibrionales,2X325@28221|Deltaproteobacteria	213481|Bdellovibrionales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	YtkA
DYD3_k127_5262263_8	264462.Bd2274	2.729e-66	237.0	2FFSJ@1|root,347PR@2|Bacteria,1P3N4@1224|Proteobacteria,431V5@68525|delta/epsilon subdivisions,2MUB9@213481|Bdellovibrionales,2WWMJ@28221|Deltaproteobacteria	213481|Bdellovibrionales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_5262263_12	1201290.M902_2747	8.485e-33	134.0	COG2353@1|root,COG2353@2|Bacteria,1N4PP@1224|Proteobacteria,42U5U@68525|delta/epsilon subdivisions	1224|Proteobacteria	S	YceI-like domain	-	-	-	-	-	-	-	-	-	-	-	-	YceI
DYD3_k127_5277778_1	862908.BMS_1378	6.161e-20	97.0	COG0457@1|root,COG0457@2|Bacteria	862908.BMS_1378|-	S	peptidyl-tyrosine sulfation	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_5277778_0	862908.BMS_1377	1.453e-99	347.0	COG1716@1|root,COG1716@2|Bacteria,1QX84@1224|Proteobacteria,430UC@68525|delta/epsilon subdivisions,2WVSU@28221|Deltaproteobacteria	28221|Deltaproteobacteria	MT	Forkhead associated domain	-	-	-	-	-	-	-	-	-	-	-	-	Yop-YscD_cpl
DYD3_k127_5278494_2	1201290.M902_2226	9.143e-17	80.0	COG0394@1|root,COG0394@2|Bacteria,1MWYQ@1224|Proteobacteria,42RQI@68525|delta/epsilon subdivisions,2MUIU@213481|Bdellovibrionales,2WNEC@28221|Deltaproteobacteria	213481|Bdellovibrionales	T	Low molecular weight phosphotyrosine protein phosphatase	arsC	-	1.20.4.1	ko:K03741	-	-	-	-	ko00000,ko01000	-	-	-	LMWPc
DYD3_k127_5278494_4	1347369.CCAD010000021_gene1566	0.0007497	46.0	COG1974@1|root,COG1974@2|Bacteria,1UI59@1239|Firmicutes	1239|Firmicutes	K	PFAM helix-turn-helix domain protein	-	-	3.4.21.88	ko:K01356	-	M00729	-	-	ko00000,ko00002,ko01000,ko01002,ko03400	-	-	-	HTH_3,Peptidase_S24
DYD3_k127_5278494_1	1353529.M899_2465	1.815e-49	185.0	COG1961@1|root,COG1961@2|Bacteria,1MWCZ@1224|Proteobacteria,42PDG@68525|delta/epsilon subdivisions	1224|Proteobacteria	L	PFAM Resolvase domain	-	-	-	ko:K06400	-	-	-	-	ko00000	-	-	-	HTH_7,Recombinase,Resolvase,Zn_ribbon_recom
DYD3_k127_530947_6	1201290.M902_1769	5.307e-06	51.0	COG0535@1|root,COG0535@2|Bacteria,1NQ7N@1224|Proteobacteria,42Y2C@68525|delta/epsilon subdivisions,2MUN4@213481|Bdellovibrionales,2WTBW@28221|Deltaproteobacteria	213481|Bdellovibrionales	S	overlaps another CDS with the same product name	-	-	-	-	-	-	-	-	-	-	-	-	Radical_SAM
DYD3_k127_530947_4	1201290.M902_1762	2.34e-12	69.0	COG0641@1|root,COG0641@2|Bacteria	2|Bacteria	C	radical SAM	-	-	-	ko:K06871	-	-	-	-	ko00000	-	-	-	Fer4_12,Fer4_14,Radical_SAM,SPASM
DYD3_k127_530947_3	1201290.M902_1760	2.788e-31	126.0	COG0641@1|root,COG0641@2|Bacteria,1MX3M@1224|Proteobacteria,42PP9@68525|delta/epsilon subdivisions,2MTCA@213481|Bdellovibrionales,2WMFX@28221|Deltaproteobacteria	213481|Bdellovibrionales	C	Radical SAM superfamily	-	-	-	ko:K06871	-	-	-	-	ko00000	-	-	-	Fer4_12,Radical_SAM,SPASM
DYD3_k127_530947_0	1353529.M899_0208	0.0	1022.0	COG2010@1|root,COG2010@2|Bacteria,1RJJ2@1224|Proteobacteria,42SCM@68525|delta/epsilon subdivisions,2MUN1@213481|Bdellovibrionales,2WPS4@28221|Deltaproteobacteria	213481|Bdellovibrionales	C	Cytochrome c	pcmF	-	-	-	-	-	-	-	-	-	-	-	Cytochrom_C,Cytochrome_CBB3
DYD3_k127_530947_2	1353529.M899_0207	3.472e-153	491.0	COG1290@1|root,COG1290@2|Bacteria,1N4ZV@1224|Proteobacteria,42TYE@68525|delta/epsilon subdivisions,2WQDQ@28221|Deltaproteobacteria	28221|Deltaproteobacteria	C	Cytochrome b(C-terminal)/b6/petD	pcmD	-	-	-	-	-	-	-	-	-	-	-	Cytochrom_B_C
DYD3_k127_530947_1	1353529.M899_0206	1.34e-158	501.0	COG1290@1|root,COG1290@2|Bacteria,1MV97@1224|Proteobacteria,42MD6@68525|delta/epsilon subdivisions,2WMNX@28221|Deltaproteobacteria	28221|Deltaproteobacteria	C	PFAM Cytochrome b b6 domain	pcmC	-	-	-	-	-	-	-	-	-	-	-	Cytochrom_B_C,Cytochrome_B
DYD3_k127_530947_7	1201290.M902_1289	0.0003133	43.0	COG0723@1|root,COG0723@2|Bacteria,1NINP@1224|Proteobacteria,42VKD@68525|delta/epsilon subdivisions,2WRHY@28221|Deltaproteobacteria	28221|Deltaproteobacteria	C	PFAM Rieske 2Fe-2S domain	pcmE	-	1.10.9.1	ko:K02636,ko:K03886	ko00190,ko00195,ko01100,map00190,map00195,map01100	M00151,M00162	R03817,R08409	RC01002	ko00000,ko00001,ko00002,ko00194,ko01000	-	-	-	Rieske
DYD3_k127_5321248_0	862908.BMS_1410	2.195e-136	474.0	2F0Z2@1|root,33U0Q@2|Bacteria,1NUGH@1224|Proteobacteria,42ZF7@68525|delta/epsilon subdivisions,2MTXD@213481|Bdellovibrionales,2WV1W@28221|Deltaproteobacteria	213481|Bdellovibrionales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_5321248_1	862908.BMS_1411	3.756e-81	302.0	COG1404@1|root,COG1404@2|Bacteria,1MU3S@1224|Proteobacteria,4304P@68525|delta/epsilon subdivisions,2MU0E@213481|Bdellovibrionales,2WVJW@28221|Deltaproteobacteria	213481|Bdellovibrionales	M	Subtilase family	-	-	-	-	-	-	-	-	-	-	-	-	Peptidase_S8
DYD3_k127_5321248_2	1469607.KK073769_gene5191	3.132e-28	121.0	COG0753@1|root,COG0753@2|Bacteria,1G4T1@1117|Cyanobacteria,1HNDV@1161|Nostocales	1117|Cyanobacteria	P	Catalase	-	-	-	-	-	-	-	-	-	-	-	-	Catalase
DYD3_k127_53311_4	1519464.HY22_08045	5.946e-61	218.0	COG0520@1|root,COG0520@2|Bacteria	2|Bacteria	E	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine	kynU	-	3.7.1.3	ko:K01556	ko00380,ko01100,map00380,map01100	M00038	R00987,R02668,R03936	RC00284,RC00415	ko00000,ko00001,ko00002,ko01000	-	-	-	Aminotran_5
DYD3_k127_53311_2	1346.DQ08_02720	8.049e-63	232.0	COG0771@1|root,COG0771@2|Bacteria,1TQ3P@1239|Firmicutes,4HA5P@91061|Bacilli	91061|Bacilli	M	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)	murD	-	6.3.2.9	ko:K01925	ko00471,ko00550,ko01100,map00471,map00550,map01100	-	R02783	RC00064,RC00141	ko00000,ko00001,ko01000,ko01011	-	-	-	Mur_ligase_C,Mur_ligase_M
DYD3_k127_53311_0	862908.BMS_2226	1.299e-69	251.0	2C7MP@1|root,2Z7Q4@2|Bacteria,1NHK1@1224|Proteobacteria,4308Z@68525|delta/epsilon subdivisions,2WVCK@28221|Deltaproteobacteria	28221|Deltaproteobacteria	S	Methyltransferase domain	-	-	-	-	-	-	-	-	-	-	-	-	Methyltransf_32
DYD3_k127_53311_3	1117318.PRUB_16737	2.11e-61	221.0	COG3239@1|root,COG3239@2|Bacteria,1RBBB@1224|Proteobacteria,1SAK4@1236|Gammaproteobacteria	1236|Gammaproteobacteria	I	Fatty acid desaturase	-	-	-	-	-	-	-	-	-	-	-	-	FA_desaturase
DYD3_k127_53311_1	391625.PPSIR1_32327	3.24e-65	231.0	COG1586@1|root,COG1586@2|Bacteria,1MXPT@1224|Proteobacteria,42RVY@68525|delta/epsilon subdivisions,2WNBF@28221|Deltaproteobacteria	28221|Deltaproteobacteria	E	S-adenosylmethionine decarboxylase	-	-	-	-	-	-	-	-	-	-	-	-	AdoMet_dc
DYD3_k127_5377248_0	765869.BDW_04830	6.988e-193	637.0	COG1404@1|root,COG1404@2|Bacteria,1R6X8@1224|Proteobacteria,42ZCV@68525|delta/epsilon subdivisions,2WTVN@28221|Deltaproteobacteria	28221|Deltaproteobacteria	O	Belongs to the peptidase S8 family	-	-	-	-	-	-	-	-	-	-	-	-	PA,Peptidase_S8,fn3_5
DYD3_k127_5377248_1	1280946.HY29_13095	5.575e-188	604.0	COG4805@1|root,COG4805@2|Bacteria,1MUBX@1224|Proteobacteria,2TSUQ@28211|Alphaproteobacteria,43WBM@69657|Hyphomonadaceae	28211|Alphaproteobacteria	S	protein conserved in bacteria	-	-	-	-	-	-	-	-	-	-	-	-	DUF885
DYD3_k127_5377248_2	1117318.PRUB_14096	4.142e-30	132.0	COG2988@1|root,COG2988@2|Bacteria	1117318.PRUB_14096|-	E	succinylglutamate desuccinylase activity	-	-	3.5.1.96	ko:K05526	ko00330,ko01100,map00330,map01100	-	R00411	RC00064,RC00090	ko00000,ko00001,ko01000	-	-	-	-
DYD3_k127_5390796_5	1353529.M899_2040	6.243e-77	271.0	COG1104@1|root,COG1104@2|Bacteria,1MU1C@1224|Proteobacteria,4304J@68525|delta/epsilon subdivisions,2MUPG@213481|Bdellovibrionales,2WV90@28221|Deltaproteobacteria	213481|Bdellovibrionales	E	Aminotransferase class-V	-	-	2.8.1.7	ko:K04487	ko00730,ko01100,ko04122,map00730,map01100,map04122	-	R07460,R11528,R11529	RC01789,RC02313	ko00000,ko00001,ko01000,ko02048,ko03016,ko03029	-	-	-	Aminotran_5
DYD3_k127_5390796_6	1201288.M900_1540	1.398e-61	217.0	COG1959@1|root,COG1959@2|Bacteria,1RDA4@1224|Proteobacteria,42V63@68525|delta/epsilon subdivisions,2WRVB@28221|Deltaproteobacteria	28221|Deltaproteobacteria	K	TIGRFAM Transcriptional regulator, Rrf2	-	-	-	ko:K13643	-	-	-	-	ko00000,ko03000	-	-	-	Rrf2
DYD3_k127_5390796_8	1201288.M900_1541	5.779e-42	158.0	COG0802@1|root,COG0802@2|Bacteria,1Q1JD@1224|Proteobacteria,437B1@68525|delta/epsilon subdivisions,2MUFE@213481|Bdellovibrionales,2X9Z6@28221|Deltaproteobacteria	213481|Bdellovibrionales	S	Threonylcarbamoyl adenosine biosynthesis protein TsaE	-	-	-	ko:K06925	-	-	-	-	ko00000,ko03016	-	-	-	TsaE
DYD3_k127_5390796_2	862908.BMS_2122	2.91e-153	500.0	COG0062@1|root,COG0063@1|root,COG0062@2|Bacteria,COG0063@2|Bacteria,1MU1Q@1224|Proteobacteria,42ND6@68525|delta/epsilon subdivisions,2WIJS@28221|Deltaproteobacteria	28221|Deltaproteobacteria	H	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration	nnrD	-	4.2.1.136,5.1.99.6	ko:K17758,ko:K17759	-	-	-	-	ko00000,ko01000	-	-	-	Carb_kinase,YjeF_N
DYD3_k127_5390796_3	1201288.M900_1542	1.463e-89	301.0	COG0854@1|root,COG0854@2|Bacteria,1MU9W@1224|Proteobacteria,42NZY@68525|delta/epsilon subdivisions,2MT0W@213481|Bdellovibrionales,2WJDY@28221|Deltaproteobacteria	213481|Bdellovibrionales	H	Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate	pdxJ	GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006725,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0008614,GO:0008615,GO:0009058,GO:0009110,GO:0009987,GO:0016740,GO:0016769,GO:0017144,GO:0018130,GO:0019438,GO:0033856,GO:0034641,GO:0042364,GO:0042816,GO:0042819,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:0072524,GO:0072525,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901615,GO:1901617	2.6.99.2	ko:K03474	ko00750,ko01100,map00750,map01100	M00124	R05838	RC01476	ko00000,ko00001,ko00002,ko01000	-	-	iAF987.Gmet_1885	PdxJ
DYD3_k127_5390796_1	1353529.M899_2045	3.191e-188	597.0	COG1109@1|root,COG1109@2|Bacteria,1MU24@1224|Proteobacteria,42M6I@68525|delta/epsilon subdivisions,2MSPJ@213481|Bdellovibrionales,2WJTV@28221|Deltaproteobacteria	213481|Bdellovibrionales	G	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate	glmM	-	5.4.2.10	ko:K03431	ko00520,ko01100,ko01130,map00520,map01100,map01130	-	R02060	RC00408	ko00000,ko00001,ko01000	-	-	iAF987.Gmet_1886	PGM_PMM_I,PGM_PMM_II,PGM_PMM_III,PGM_PMM_IV
DYD3_k127_5390796_7	1353529.M899_2046	4.847e-54	201.0	COG4856@1|root,COG4856@2|Bacteria,1REEU@1224|Proteobacteria,42RY2@68525|delta/epsilon subdivisions,2MTEZ@213481|Bdellovibrionales,2X2R1@28221|Deltaproteobacteria	213481|Bdellovibrionales	S	PFAM YbbR family protein	-	-	-	-	-	-	-	-	-	-	-	-	YbbR
DYD3_k127_5390796_4	1353529.M899_2047	1.973e-86	293.0	COG1624@1|root,COG1624@2|Bacteria,1PEQT@1224|Proteobacteria,42P5A@68525|delta/epsilon subdivisions,2MT0A@213481|Bdellovibrionales,2WKPP@28221|Deltaproteobacteria	213481|Bdellovibrionales	S	Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria	dacA	-	2.7.7.85	ko:K18672	-	-	-	-	ko00000,ko01000	-	-	-	DisA_N
DYD3_k127_5390796_0	1201288.M900_1547	2.356e-226	719.0	COG2203@1|root,COG2204@1|root,COG2203@2|Bacteria,COG2204@2|Bacteria,1MU0N@1224|Proteobacteria,42M03@68525|delta/epsilon subdivisions,2MUTG@213481|Bdellovibrionales,2X82Y@28221|Deltaproteobacteria	213481|Bdellovibrionales	T	Bacterial regulatory protein, Fis family	-	-	-	-	-	-	-	-	-	-	-	-	GAF,HTH_8,PilZ,Sigma54_activat
DYD3_k127_5390796_9	1353529.M899_2058	2.413e-15	86.0	COG0189@1|root,COG0189@2|Bacteria	2|Bacteria	HJ	Glutathione synthase Ribosomal protein S6 modification enzyme (Glutaminyl transferase)	lysX_1	-	6.3.2.32,6.3.5.5	ko:K01955,ko:K05844,ko:K14940	ko00240,ko00250,ko00680,ko01100,ko01120,map00240,map00250,map00680,map01100,map01120	M00051	R00256,R00575,R01395,R09401,R10948,R10949	RC00002,RC00010,RC00043,RC00064,RC00090,RC02750,RC02798,RC03314	ko00000,ko00001,ko00002,ko01000,ko03009	-	-	-	ATP-grasp_3,RimK
DYD3_k127_5413536_12	290397.Adeh_3934	4.954e-15	84.0	COG1403@1|root,COG1403@2|Bacteria,1P9DV@1224|Proteobacteria,432XA@68525|delta/epsilon subdivisions,2WXXR@28221|Deltaproteobacteria	28221|Deltaproteobacteria	L	HNH nucleases	-	-	-	-	-	-	-	-	-	-	-	-	HNH
DYD3_k127_5413536_15	1385521.N803_05875	0.0002275	51.0	2EVIQ@1|root,33NYW@2|Bacteria,2IIIZ@201174|Actinobacteria,4FHQ3@85021|Intrasporangiaceae	201174|Actinobacteria	S	Ceramidase	-	-	-	-	-	-	-	-	-	-	-	-	Ceramidase
DYD3_k127_5413536_6	1201290.M902_2117	5.789e-66	228.0	COG0720@1|root,COG0720@2|Bacteria,1RKYI@1224|Proteobacteria,4382Q@68525|delta/epsilon subdivisions,2WX5Y@28221|Deltaproteobacteria	28221|Deltaproteobacteria	H	6-pyruvoyl tetrahydropterin synthase	-	-	4.1.2.50,4.2.3.12	ko:K01737	ko00790,ko01100,map00790,map01100	M00842,M00843	R04286,R09959	RC01117,RC02846,RC02847	ko00000,ko00001,ko00002,ko01000,ko03016	-	-	-	PTPS
DYD3_k127_5413536_10	264462.Bd1431	5.258e-19	92.0	COG1525@1|root,COG1525@2|Bacteria,1NM4H@1224|Proteobacteria,42ZX0@68525|delta/epsilon subdivisions,2MU1J@213481|Bdellovibrionales,2WVCT@28221|Deltaproteobacteria	213481|Bdellovibrionales	L	nuclease	-	-	-	-	-	-	-	-	-	-	-	-	SNase
DYD3_k127_5413536_7	643867.Ftrac_0002	2.999e-45	180.0	COG0322@1|root,COG0847@1|root,COG0322@2|Bacteria,COG0847@2|Bacteria,4NEQX@976|Bacteroidetes,47PIJ@768503|Cytophagia	976|Bacteroidetes	L	TIGRFAM exonuclease, DNA polymerase III, epsilon subunit family	-	-	2.7.7.7	ko:K02342	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	M00260	R00375,R00376,R00377,R00378	RC02795	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	-	-	-	GIY-YIG,RNase_T
DYD3_k127_5413536_2	1201290.M902_1743	7.279e-95	315.0	COG0692@1|root,COG0692@2|Bacteria,1MV80@1224|Proteobacteria,42MYK@68525|delta/epsilon subdivisions,2MTNX@213481|Bdellovibrionales,2WN3P@28221|Deltaproteobacteria	213481|Bdellovibrionales	L	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine	ung	-	3.2.2.27	ko:K03648	ko03410,ko05340,map03410,map05340	-	-	-	ko00000,ko00001,ko01000,ko03400	-	-	-	UDG
DYD3_k127_5413536_4	946362.XP_004994922.1	6.24e-71	250.0	COG0144@1|root,KOG2198@2759|Eukaryota,38EFR@33154|Opisthokonta	33154|Opisthokonta	J	rRNA methylation	NSUN4	GO:0000154,GO:0000313,GO:0000315,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005759,GO:0005761,GO:0005762,GO:0005840,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008169,GO:0008173,GO:0008649,GO:0008757,GO:0009383,GO:0009451,GO:0009987,GO:0010467,GO:0015934,GO:0016070,GO:0016072,GO:0016434,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0031974,GO:0032259,GO:0032991,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044391,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0046483,GO:0070013,GO:0071704,GO:0071840,GO:0090304,GO:0098798,GO:0140098,GO:0140102,GO:1901360,GO:1990904	-	ko:K21970	-	-	-	-	ko00000,ko01000,ko03009,ko03029	-	-	-	Methyltr_RsmB-F
DYD3_k127_5413536_5	1353529.M899_0042	2.303e-67	235.0	COG0225@1|root,COG0225@2|Bacteria,1PXIJ@1224|Proteobacteria,43A0J@68525|delta/epsilon subdivisions,2MTVI@213481|Bdellovibrionales,2X256@28221|Deltaproteobacteria	213481|Bdellovibrionales	O	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine	-	-	1.8.4.11	ko:K07304	-	-	-	-	ko00000,ko01000	-	-	-	PMSR
DYD3_k127_5413536_13	1298593.TOL_2519	1.873e-14	82.0	COG2204@1|root,COG2204@2|Bacteria,1MU0N@1224|Proteobacteria,1RMCK@1236|Gammaproteobacteria,1XINN@135619|Oceanospirillales	135619|Oceanospirillales	T	response regulator	-	-	-	ko:K10943	ko02020,ko05111,map02020,map05111	M00515	-	-	ko00000,ko00001,ko00002,ko02022	-	-	-	HTH_8,Response_reg,Sigma54_activat
DYD3_k127_5413536_16	1391646.AVSU01000057_gene1244	0.0004875	51.0	COG0265@1|root,COG0265@2|Bacteria,1TRM8@1239|Firmicutes,247M5@186801|Clostridia,25R05@186804|Peptostreptococcaceae	186801|Clostridia	M	Trypsin-like peptidase domain	htrA	-	3.4.21.107	ko:K04771	ko01503,ko02020,map01503,map02020	M00728	-	-	ko00000,ko00001,ko00002,ko01000,ko01002,ko03110	-	-	-	PDZ_2,Trypsin_2
DYD3_k127_5413536_14	411469.EUBHAL_00385	0.0001342	53.0	COG0500@1|root,COG0789@1|root,COG0789@2|Bacteria,COG2226@2|Bacteria,1TSDZ@1239|Firmicutes,248EY@186801|Clostridia,25ZHQ@186806|Eubacteriaceae	186801|Clostridia	KQ	MerR, DNA binding	-	-	-	-	-	-	-	-	-	-	-	-	MerR_1,Methyltransf_11,Methyltransf_25,Methyltransf_31
DYD3_k127_5413536_0	1124780.ANNU01000005_gene2458	0.0	1142.0	COG0209@1|root,COG0209@2|Bacteria,4NEHQ@976|Bacteroidetes,47JEH@768503|Cytophagia	976|Bacteroidetes	F	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides	nrdA	-	1.17.4.1	ko:K00525	ko00230,ko00240,ko01100,map00230,map00240,map01100	M00053	R02017,R02018,R02019,R02024	RC00613	ko00000,ko00001,ko00002,ko01000,ko03400	-	-	-	ATP-cone,Ribonuc_red_lgC,Ribonuc_red_lgN
DYD3_k127_5413536_1	5888.CAK94969	1.219e-147	475.0	COG1678@1|root,KOG1567@2759|Eukaryota,3ZB9P@5878|Ciliophora	5878|Ciliophora	F	Ribonucleotide reductase, small chain	-	-	1.17.4.1	ko:K10808	ko00230,ko00240,ko00480,ko00983,ko01100,ko04115,map00230,map00240,map00480,map00983,map01100,map04115	M00053	R02017,R02019,R02024,R08363,R08364,R11893	RC00613,RC01003	ko00000,ko00001,ko00002,ko01000,ko03400	-	-	-	Ribonuc_red_sm
DYD3_k127_5413536_8	28072.Nos7524_1536	2.773e-22	106.0	COG0428@1|root,COG0428@2|Bacteria,1G1NT@1117|Cyanobacteria,1HTE0@1161|Nostocales	1117|Cyanobacteria	P	divalent heavy-metal cations transporter	-	-	-	ko:K07238	-	-	-	-	ko00000,ko02000	2.A.5.5	-	-	Zip
DYD3_k127_5413536_9	1353529.M899_3098	7.964e-21	101.0	COG3093@1|root,COG3093@2|Bacteria	2|Bacteria	K	addiction module antidote protein HigA	-	-	-	ko:K07110,ko:K21686	-	-	-	-	ko00000,ko03000	-	-	-	DUF2083,DUF4423,HTH_3,HTH_31,Peptidase_M78
DYD3_k127_5413536_3	1380391.JIAS01000014_gene2278	2.161e-77	261.0	COG0783@1|root,COG0783@2|Bacteria,1RAC5@1224|Proteobacteria,2U5Q5@28211|Alphaproteobacteria,2JS6E@204441|Rhodospirillales	204441|Rhodospirillales	P	Belongs to the Dps family	-	-	-	ko:K04047	-	-	-	-	ko00000,ko03036	-	-	-	Ferritin
DYD3_k127_5451043_4	862908.BMS_0166	4.62e-180	580.0	COG0661@1|root,COG0661@2|Bacteria,1MU1Z@1224|Proteobacteria,42N87@68525|delta/epsilon subdivisions,2MSTS@213481|Bdellovibrionales,2WK1B@28221|Deltaproteobacteria	213481|Bdellovibrionales	S	pfam abc1	-	-	-	ko:K03688	-	-	-	-	ko00000	-	-	-	ABC1,RIO1
DYD3_k127_5451043_10	1201288.M900_0226	9.201e-26	109.0	2EH48@1|root,33AW7@2|Bacteria,1NIYU@1224|Proteobacteria,42XKK@68525|delta/epsilon subdivisions,2MT7I@213481|Bdellovibrionales,2WSKU@28221|Deltaproteobacteria	213481|Bdellovibrionales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_5451043_11	1304875.JAFZ01000001_gene1342	1.401e-25	111.0	COG0782@1|root,COG0782@2|Bacteria,3TB05@508458|Synergistetes	508458|Synergistetes	K	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides	greA	-	-	ko:K03624	-	-	-	-	ko00000,ko03021	-	-	-	GreA_GreB,GreA_GreB_N
DYD3_k127_5451043_2	862908.BMS_0161	1.36e-191	619.0	COG1200@1|root,COG1200@2|Bacteria,1MWN2@1224|Proteobacteria,42NF8@68525|delta/epsilon subdivisions,2MSM9@213481|Bdellovibrionales,2WKBA@28221|Deltaproteobacteria	213481|Bdellovibrionales	L	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)	recG	-	3.6.4.12	ko:K03655	ko03440,map03440	-	-	-	ko00000,ko00001,ko01000,ko03400	-	-	-	DEAD,Helicase_C,RecG_wedge
DYD3_k127_5451043_6	862908.BMS_0159	1.218e-77	269.0	COG2267@1|root,COG2267@2|Bacteria,1QX85@1224|Proteobacteria,42W1M@68525|delta/epsilon subdivisions,2MT2S@213481|Bdellovibrionales,2WR6V@28221|Deltaproteobacteria	213481|Bdellovibrionales	I	alpha beta	-	-	-	-	-	-	-	-	-	-	-	-	Abhydrolase_1
DYD3_k127_5451043_5	1201288.M900_0222	6.02e-147	477.0	2BKCR@1|root,32ETA@2|Bacteria,1RJ21@1224|Proteobacteria,430EX@68525|delta/epsilon subdivisions,2MT09@213481|Bdellovibrionales,2WVVF@28221|Deltaproteobacteria	213481|Bdellovibrionales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_5451043_8	862908.BMS_0156	6.146e-35	139.0	COG1267@1|root,COG1267@2|Bacteria,1MZJA@1224|Proteobacteria,42U6G@68525|delta/epsilon subdivisions,2MT90@213481|Bdellovibrionales,2WQDR@28221|Deltaproteobacteria	213481|Bdellovibrionales	I	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)	pgpA	-	3.1.3.27	ko:K01095	ko00564,ko01100,map00564,map01100	-	R02029	RC00017	ko00000,ko00001,ko01000	-	-	iAF987.Gmet_0195	PgpA
DYD3_k127_5451043_3	862908.BMS_0155	5.629e-181	572.0	COG0468@1|root,COG0468@2|Bacteria,1MU3C@1224|Proteobacteria,42M69@68525|delta/epsilon subdivisions,2MSU5@213481|Bdellovibrionales,2WIYC@28221|Deltaproteobacteria	213481|Bdellovibrionales	L	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage	recA	-	-	ko:K03553	ko03440,map03440	M00729	-	-	ko00000,ko00001,ko00002,ko03400	-	-	-	RecA
DYD3_k127_5451043_12	1201290.M902_1338	1.791e-13	78.0	COG2137@1|root,COG2137@2|Bacteria	2|Bacteria	S	regulation of DNA repair	recX	-	2.4.1.337	ko:K03565,ko:K19002	ko00561,ko01100,map00561,map01100	-	R10850	RC00005,RC00059	ko00000,ko00001,ko01000,ko01003,ko03400	-	GT4	-	RecX
DYD3_k127_5451043_9	717231.Flexsi_1366	4.039e-28	130.0	COG0793@1|root,COG0793@2|Bacteria,2GEK7@200930|Deferribacteres	200930|Deferribacteres	M	tail specific protease	-	-	3.4.21.102	ko:K03797	-	-	-	-	ko00000,ko01000,ko01002	-	-	-	PDZ_2,Peptidase_S41
DYD3_k127_5451043_0	1123518.ARWI01000001_gene686	3.11e-239	767.0	COG0013@1|root,COG0013@2|Bacteria,1MU9A@1224|Proteobacteria,1RMWZ@1236|Gammaproteobacteria,45ZUH@72273|Thiotrichales	72273|Thiotrichales	J	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain	alaS	-	6.1.1.7	ko:K01872	ko00970,map00970	M00359,M00360	R03038	RC00055,RC00523	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	-	-	-	DHHA1,tRNA-synt_2c,tRNA_SAD
DYD3_k127_5451043_1	862908.BMS_0153	4.319e-206	655.0	COG4166@1|root,COG4166@2|Bacteria,1P91R@1224|Proteobacteria,42Z5J@68525|delta/epsilon subdivisions,2X7Z6@28221|Deltaproteobacteria	28221|Deltaproteobacteria	E	Bacterial extracellular solute-binding proteins, family 5 Middle	-	-	-	ko:K13893	ko02010,map02010	M00349	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.5.21,3.A.1.5.24	-	-	SBP_bac_5
DYD3_k127_5472930_2	1122137.AQXF01000005_gene1301	1.149e-41	156.0	COG1570@1|root,COG1570@2|Bacteria,1MUA4@1224|Proteobacteria,2TR1R@28211|Alphaproteobacteria	28211|Alphaproteobacteria	L	Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides	xseA	-	3.1.11.6	ko:K03601	ko03430,map03430	-	-	-	ko00000,ko00001,ko01000,ko03400	-	-	-	Exonuc_VII_L,tRNA_anti_2
DYD3_k127_5472930_3	1121335.Clst_0871	5.765e-08	59.0	COG0745@1|root,COG0745@2|Bacteria,1TSCM@1239|Firmicutes,248K7@186801|Clostridia,3WI3B@541000|Ruminococcaceae	186801|Clostridia	K	Response regulator receiver domain protein	-	-	-	-	-	-	-	-	-	-	-	-	Response_reg,Trans_reg_C
DYD3_k127_5472930_1	868864.Dester_1518	5.827e-202	639.0	COG0516@1|root,COG0517@1|root,COG0516@2|Bacteria,COG0517@2|Bacteria,2G3I9@200783|Aquificae	200783|Aquificae	F	Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth	guaB	GO:0003674,GO:0003824,GO:0003938,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006163,GO:0006164,GO:0006183,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009163,GO:0009165,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0016491,GO:0016614,GO:0016616,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034404,GO:0034641,GO:0034654,GO:0042278,GO:0042451,GO:0042455,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046039,GO:0046128,GO:0046129,GO:0046390,GO:0046483,GO:0055086,GO:0055114,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901068,GO:1901070,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659	1.1.1.205	ko:K00088	ko00230,ko00983,ko01100,ko01110,map00230,map00983,map01100,map01110	M00050	R01130,R08240	RC00143,RC02207	ko00000,ko00001,ko00002,ko01000,ko04147	-	-	-	CBS,IMPDH
DYD3_k127_5472930_0	862908.BMS_2522	1.79e-239	749.0	COG0518@1|root,COG0519@1|root,COG0518@2|Bacteria,COG0519@2|Bacteria,1MU2A@1224|Proteobacteria,42M0I@68525|delta/epsilon subdivisions,2MSM5@213481|Bdellovibrionales,2WJ6D@28221|Deltaproteobacteria	213481|Bdellovibrionales	F	Catalyzes the synthesis of GMP from XMP	guaA	GO:0003674,GO:0003824,GO:0003921,GO:0003922,GO:0006139,GO:0006163,GO:0006164,GO:0006177,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009163,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0016884,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034404,GO:0034641,GO:0034654,GO:0042278,GO:0042451,GO:0042455,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046037,GO:0046128,GO:0046129,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901068,GO:1901070,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659	6.3.5.2	ko:K01951	ko00230,ko00983,ko01100,map00230,map00983,map01100	M00050	R01230,R01231,R08244	RC00010,RC00204	ko00000,ko00001,ko00002,ko01000,ko01002	-	-	-	GATase,GMP_synt_C,NAD_synthase,tRNA_Me_trans
DYD3_k127_549007_0	1095769.CAHF01000007_gene1674	1.644e-89	298.0	COG0605@1|root,COG0605@2|Bacteria,1MVW2@1224|Proteobacteria,2VI2Y@28216|Betaproteobacteria,4739J@75682|Oxalobacteraceae	28216|Betaproteobacteria	C	Destroys radicals which are normally produced within the cells and which are toxic to biological systems	sodB	GO:0000302,GO:0000303,GO:0000305,GO:0003674,GO:0003824,GO:0004784,GO:0006801,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0009636,GO:0009987,GO:0010035,GO:0016209,GO:0016491,GO:0016721,GO:0019430,GO:0033554,GO:0034599,GO:0034614,GO:0042221,GO:0044237,GO:0050896,GO:0051716,GO:0055114,GO:0070887,GO:0071450,GO:0071451,GO:0072593,GO:0097237,GO:0098754,GO:0098869,GO:1901700,GO:1901701,GO:1990748	1.15.1.1,3.1.11.6	ko:K03601,ko:K04564	ko03430,ko04013,ko04068,ko04146,ko04211,ko04212,ko04213,ko05016,map03430,map04013,map04068,map04146,map04211,map04212,map04213,map05016	-	-	-	ko00000,ko00001,ko01000,ko03400	-	-	-	Sod_Fe_C,Sod_Fe_N
DYD3_k127_549007_4	744872.Spica_0767	2.247e-55	203.0	COG0745@1|root,COG0745@2|Bacteria,2J7CK@203691|Spirochaetes	203691|Spirochaetes	K	COGs COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain	-	-	-	ko:K07657,ko:K18941	ko02020,map02020	M00434,M00716,M00717	-	-	ko00000,ko00001,ko00002,ko02022	-	-	-	Response_reg,Trans_reg_C
DYD3_k127_549007_1	1353529.M899_0729	8.008e-76	276.0	COG5002@1|root,COG5002@2|Bacteria,1MWF3@1224|Proteobacteria,42NB5@68525|delta/epsilon subdivisions,2MSZN@213481|Bdellovibrionales,2WJGX@28221|Deltaproteobacteria	213481|Bdellovibrionales	T	histidine kinase HAMP region domain protein	phoR	-	2.7.13.3	ko:K07636	ko02020,map02020	M00434	-	-	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	-	-	-	HAMP,HATPase_c,HisKA,PAS,PAS_4,PAS_8,sCache_like
DYD3_k127_549007_3	862908.BMS_1226	4.964e-57	218.0	COG0457@1|root,COG0457@2|Bacteria	862908.BMS_1226|-	S	peptidyl-tyrosine sulfation	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_549007_5	1353529.M899_2235	1.486e-48	190.0	COG4254@1|root,COG4254@2|Bacteria,1NATC@1224|Proteobacteria,42X7Q@68525|delta/epsilon subdivisions,2MU59@213481|Bdellovibrionales,2WTAB@28221|Deltaproteobacteria	213481|Bdellovibrionales	S	FecR protein	-	-	-	-	-	-	-	-	-	-	-	-	FecR
DYD3_k127_5495136_1	264462.Bd1798	1.08e-190	615.0	COG0841@1|root,COG0841@2|Bacteria,1MU48@1224|Proteobacteria,42MF6@68525|delta/epsilon subdivisions,2MTIN@213481|Bdellovibrionales,2WJ8D@28221|Deltaproteobacteria	213481|Bdellovibrionales	V	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family	-	-	-	ko:K03296	-	-	-	-	ko00000	2.A.6.2	-	-	ACR_tran
DYD3_k127_5495136_10	1201288.M900_0746	1.919e-25	113.0	COG1309@1|root,COG1309@2|Bacteria,1NI5D@1224|Proteobacteria,42XAH@68525|delta/epsilon subdivisions,2WSYM@28221|Deltaproteobacteria	28221|Deltaproteobacteria	K	PFAM regulatory protein TetR	-	-	-	ko:K09017	-	-	-	-	ko00000,ko03000	-	-	-	TetR_N
DYD3_k127_5495136_2	1089550.ATTH01000001_gene1196	1.969e-171	555.0	COG2225@1|root,COG2225@2|Bacteria,4NF5H@976|Bacteroidetes,1FJVN@1100069|Bacteroidetes Order II. Incertae sedis	976|Bacteroidetes	C	Malate synthase	aceB	-	2.3.3.9	ko:K01638	ko00620,ko00630,ko01100,ko01110,ko01120,ko01200,map00620,map00630,map01100,map01110,map01120,map01200	M00012	R00472	RC00004,RC00308,RC02747	ko00000,ko00001,ko00002,ko01000	-	-	-	Malate_synthase
DYD3_k127_5495136_0	986075.CathTA2_2080	8.147e-212	664.0	COG2224@1|root,COG2224@2|Bacteria,1TP1U@1239|Firmicutes,4HBBD@91061|Bacilli	91061|Bacilli	C	Isocitrate lyase	aceA	-	4.1.3.1	ko:K01637	ko00630,ko01100,ko01110,ko01120,ko01200,map00630,map01100,map01110,map01120,map01200	M00012	R00479	RC00311,RC00313	ko00000,ko00001,ko00002,ko01000	-	-	-	ICL
DYD3_k127_5495136_7	264462.Bd2091	8.194e-45	168.0	2AINR@1|root,31957@2|Bacteria,1NZ0E@1224|Proteobacteria,430UB@68525|delta/epsilon subdivisions,2MT6P@213481|Bdellovibrionales,2WVME@28221|Deltaproteobacteria	213481|Bdellovibrionales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_5495136_8	614083.AWQR01000005_gene1082	7.97e-43	167.0	COG3384@1|root,COG3384@2|Bacteria,1MXJZ@1224|Proteobacteria,2VIC3@28216|Betaproteobacteria,4ABFP@80864|Comamonadaceae	28216|Betaproteobacteria	S	PFAM Extradiol ring-cleavage dioxygenase, class III	ygiD	-	-	ko:K15777	ko00965,map00965	-	R08836	RC00387	ko00000,ko00001,ko01000	-	-	-	LigB
DYD3_k127_5495136_6	1242864.D187_007429	2.294e-49	189.0	COG0642@1|root,COG2202@1|root,COG2203@1|root,COG2202@2|Bacteria,COG2203@2|Bacteria,COG2205@2|Bacteria,1NRP8@1224|Proteobacteria	1224|Proteobacteria	T	Histidine kinase	-	-	-	-	-	-	-	-	-	-	-	-	GAF,GAF_2,HATPase_c,HisKA,PAS,PAS_3,PAS_4,PAS_9,Response_reg
DYD3_k127_5495136_4	1089551.KE386572_gene120	1.096e-94	321.0	COG0657@1|root,COG0657@2|Bacteria,1NEXK@1224|Proteobacteria,2U5X1@28211|Alphaproteobacteria,4BRDK@82117|unclassified Alphaproteobacteria	28211|Alphaproteobacteria	I	Carboxylesterase family	-	-	-	ko:K01066	-	-	-	-	ko00000,ko01000	-	-	-	Abhydrolase_3
DYD3_k127_5495136_3	264462.Bd1855	9.961e-95	329.0	COG0642@1|root,COG2770@1|root,COG2205@2|Bacteria,COG2770@2|Bacteria,1Q1XR@1224|Proteobacteria,437JR@68525|delta/epsilon subdivisions,2MTYS@213481|Bdellovibrionales,2WYKZ@28221|Deltaproteobacteria	213481|Bdellovibrionales	T	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain	-	-	-	-	-	-	-	-	-	-	-	-	HATPase_c,HisKA
DYD3_k127_5495136_5	1162668.LFE_0086	3.794e-60	214.0	COG0745@1|root,COG0745@2|Bacteria,3J0JU@40117|Nitrospirae	40117|Nitrospirae	K	Transcriptional regulatory protein, C terminal	-	-	-	ko:K07664	ko02020,map02020	M00450,M00645,M00646,M00648	-	-	ko00000,ko00001,ko00002,ko02022	-	-	-	Response_reg,Trans_reg_C
DYD3_k127_5495136_9	211114.JOEF01000004_gene6561	1.254e-29	120.0	COG2129@1|root,COG2129@2|Bacteria,2GJ72@201174|Actinobacteria,4DXKD@85010|Pseudonocardiales	201174|Actinobacteria	S	PFAM Calcineurin-like phosphoesterase	-	-	-	-	-	-	-	-	-	-	-	-	Metallophos,Metallophos_2
DYD3_k127_5501414_2	862908.BMS_0195	8.058e-290	907.0	COG0210@1|root,COG0210@2|Bacteria,1MU0G@1224|Proteobacteria,42MKU@68525|delta/epsilon subdivisions,2MSPS@213481|Bdellovibrionales,2WJR3@28221|Deltaproteobacteria	213481|Bdellovibrionales	L	PFAM UvrD REP helicase	pcrA	-	3.6.4.12	ko:K03657	ko03420,ko03430,map03420,map03430	-	-	-	ko00000,ko00001,ko01000,ko03400	-	-	-	UvrD-helicase,UvrD_C
DYD3_k127_5501414_3	862908.BMS_0194	3.526e-219	695.0	COG0449@1|root,COG0449@2|Bacteria,1MW4K@1224|Proteobacteria,42KZ7@68525|delta/epsilon subdivisions,2MSUB@213481|Bdellovibrionales,2WJP6@28221|Deltaproteobacteria	213481|Bdellovibrionales	M	Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source	glmS	GO:0003674,GO:0003824,GO:0004360,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006002,GO:0006040,GO:0006047,GO:0006139,GO:0006464,GO:0006486,GO:0006487,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008483,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009225,GO:0009987,GO:0016740,GO:0016769,GO:0019538,GO:0019637,GO:0034641,GO:0034645,GO:0036211,GO:0043170,GO:0043412,GO:0043413,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0055086,GO:0070085,GO:0070548,GO:0071704,GO:1901135,GO:1901137,GO:1901360,GO:1901564,GO:1901566,GO:1901576	2.6.1.16	ko:K00820	ko00250,ko00520,ko01100,ko01130,ko04931,map00250,map00520,map01100,map01130,map04931	-	R00768	RC00010,RC00163,RC02752	ko00000,ko00001,ko01000,ko01002	-	-	iAF987.Gmet_1487	GATase_6,SIS
DYD3_k127_5501414_5	1353529.M899_0192	7.137e-139	455.0	COG1207@1|root,COG1207@2|Bacteria,1MUPH@1224|Proteobacteria,42N3K@68525|delta/epsilon subdivisions,2MSQW@213481|Bdellovibrionales,2WIMV@28221|Deltaproteobacteria	213481|Bdellovibrionales	M	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain	glmU	-	2.3.1.157,2.7.7.23	ko:K04042,ko:K11528	ko00520,ko01100,ko01130,map00520,map01100,map01130	M00362	R00416,R05332	RC00002,RC00004,RC00166	ko00000,ko00001,ko00002,ko01000	-	-	-	Hexapep,NTP_transf_3,NTP_transferase
DYD3_k127_5501414_1	1184267.A11Q_2579	9.255e-298	933.0	COG0466@1|root,COG0466@2|Bacteria,1MUV2@1224|Proteobacteria,42M9W@68525|delta/epsilon subdivisions,2MSMY@213481|Bdellovibrionales,2WJ29@28221|Deltaproteobacteria	213481|Bdellovibrionales	O	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner	lon-3	-	3.4.21.53	ko:K01338	ko04112,map04112	-	-	-	ko00000,ko00001,ko01000,ko01002	-	-	-	AAA,LON_substr_bdg,Lon_C
DYD3_k127_5501414_7	649747.HMPREF0083_02071	4.997e-22	100.0	COG2201@1|root,COG2201@2|Bacteria,1V3IU@1239|Firmicutes,4HGY2@91061|Bacilli,27783@186822|Paenibacillaceae	91061|Bacilli	NT	Chemotaxis protein cheY	cheY	GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464	-	ko:K03413	ko02020,ko02030,map02020,map02030	M00506	-	-	ko00000,ko00001,ko00002,ko02022,ko02035	-	-	-	Response_reg
DYD3_k127_5501414_4	862908.BMS_0182	8.72e-216	683.0	COG3209@1|root,COG3209@2|Bacteria,1N1XY@1224|Proteobacteria,42Z2Z@68525|delta/epsilon subdivisions,2MSWE@213481|Bdellovibrionales,2WTW8@28221|Deltaproteobacteria	213481|Bdellovibrionales	M	COG3209 Rhs family protein	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_5501414_6	1353529.M899_0184	1.381e-92	314.0	COG4965@1|root,COG4965@2|Bacteria,1MYNG@1224|Proteobacteria,42UK9@68525|delta/epsilon subdivisions,2MT07@213481|Bdellovibrionales,2WQT2@28221|Deltaproteobacteria	213481|Bdellovibrionales	U	flp pilus assembly protein	-	-	-	ko:K12510	-	-	-	-	ko00000,ko02044	-	-	-	T2SSF
DYD3_k127_5501414_0	1353529.M899_0183	0.0	1055.0	COG4962@1|root,COG4963@1|root,COG4962@2|Bacteria,COG4963@2|Bacteria,1R7EN@1224|Proteobacteria,42NAK@68525|delta/epsilon subdivisions,2MSSH@213481|Bdellovibrionales,2WIYX@28221|Deltaproteobacteria	213481|Bdellovibrionales	U	PFAM Type II secretion system protein E	-	-	-	ko:K02283,ko:K03609	-	-	-	-	ko00000,ko02035,ko02044,ko03036,ko04812	-	-	-	CbiA,FHA,T2SSE
DYD3_k127_5501414_8	862908.BMS_0179	2.424e-09	58.0	COG4796@1|root,COG4796@2|Bacteria,1NE2V@1224|Proteobacteria,43EIK@68525|delta/epsilon subdivisions,2MT0C@213481|Bdellovibrionales,2X8H4@28221|Deltaproteobacteria	213481|Bdellovibrionales	U	Bacterial type II and III secretion system protein	-	-	-	ko:K02280	-	-	-	-	ko00000,ko02035,ko02044	-	-	-	Secretin,T2SS-T3SS_pil_N
DYD3_k127_5509320_0	862908.BMS_0267	2.299e-131	443.0	COG0810@1|root,COG1716@1|root,COG0810@2|Bacteria,COG1716@2|Bacteria,1NEW5@1224|Proteobacteria,42VUF@68525|delta/epsilon subdivisions,2MTK7@213481|Bdellovibrionales,2WRV9@28221|Deltaproteobacteria	213481|Bdellovibrionales	T	FHA domain	-	-	-	-	-	-	-	-	-	-	-	-	FHA,TonB_C,Yop-YscD_cpl
DYD3_k127_5509320_2	1353529.M899_1504	5.703e-15	79.0	COG0457@1|root,COG0457@2|Bacteria	1353529.M899_1504|-	S	peptidyl-tyrosine sulfation	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_553985_4	1201290.M902_1543	1.751e-34	134.0	COG1228@1|root,COG1228@2|Bacteria,1MUYR@1224|Proteobacteria,42NVH@68525|delta/epsilon subdivisions,2MSY9@213481|Bdellovibrionales,2WJN9@28221|Deltaproteobacteria	213481|Bdellovibrionales	Q	Belongs to the metallo-dependent hydrolases superfamily. HutI family	hutI	-	3.5.2.7	ko:K01468	ko00340,ko01100,map00340,map01100	M00045	R02288	RC00683	ko00000,ko00001,ko00002,ko01000	-	-	-	Amidohydro_1,Amidohydro_3
DYD3_k127_553985_5	862908.BMS_3422	3.581e-32	134.0	COG0526@1|root,COG0526@2|Bacteria,1RHR7@1224|Proteobacteria,42WV1@68525|delta/epsilon subdivisions	1224|Proteobacteria	CO	Thioredoxin-like	resA	-	-	-	-	-	-	-	-	-	-	-	AhpC-TSA,LGT,Redoxin
DYD3_k127_553985_2	290397.Adeh_3457	1.435e-136	450.0	COG0554@1|root,COG0554@2|Bacteria,1MUP7@1224|Proteobacteria,42M9Z@68525|delta/epsilon subdivisions,2WIYZ@28221|Deltaproteobacteria,2YU0Z@29|Myxococcales	28221|Deltaproteobacteria	F	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate	glpK	GO:0003674,GO:0003824,GO:0004370,GO:0005975,GO:0006066,GO:0006071,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019400,GO:0019751,GO:0044237,GO:0044238,GO:0044262,GO:0044281,GO:0071704,GO:1901615	2.7.1.30	ko:K00864	ko00561,ko01100,ko03320,ko04626,map00561,map01100,map03320,map04626	-	R00847	RC00002,RC00017	ko00000,ko00001,ko01000,ko04147	-	-	-	FGGY_C,FGGY_N
DYD3_k127_553985_3	1184267.A11Q_239	1.942e-50	182.0	COG4270@1|root,COG4270@2|Bacteria,1Q1ZM@1224|Proteobacteria,430I5@68525|delta/epsilon subdivisions,2MU4G@213481|Bdellovibrionales,2WVJY@28221|Deltaproteobacteria	213481|Bdellovibrionales	S	Membrane	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_553985_1	1353529.M899_3498	3.696e-198	626.0	COG1066@1|root,COG1066@2|Bacteria,1MUJQ@1224|Proteobacteria,42MG8@68525|delta/epsilon subdivisions,2MTUV@213481|Bdellovibrionales,2WJWP@28221|Deltaproteobacteria	213481|Bdellovibrionales	L	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function	radA	-	-	ko:K04485	-	-	-	-	ko00000,ko03400	-	-	-	AAA_25,ATPase,ChlI,Lon_C
DYD3_k127_553985_0	1353529.M899_3500	1.398e-206	659.0	COG0272@1|root,COG0272@2|Bacteria,1MV3R@1224|Proteobacteria,42MC5@68525|delta/epsilon subdivisions,2MSVP@213481|Bdellovibrionales,2WIT5@28221|Deltaproteobacteria	213481|Bdellovibrionales	L	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA	ligA	-	6.5.1.2	ko:K01972	ko03030,ko03410,ko03420,ko03430,map03030,map03410,map03420,map03430	-	R00382	RC00005	ko00000,ko00001,ko01000,ko03032,ko03400	-	-	-	BRCT,DNA_ligase_OB,DNA_ligase_ZBD,DNA_ligase_aden,HHH_2,HHH_5
DYD3_k127_5547825_17	264462.Bd0902	1.802e-10	63.0	COG0583@1|root,COG0583@2|Bacteria,1MU2E@1224|Proteobacteria,42T5W@68525|delta/epsilon subdivisions,2MTTD@213481|Bdellovibrionales,2WPVR@28221|Deltaproteobacteria	213481|Bdellovibrionales	K	transcriptional regulator	-	-	-	-	-	-	-	-	-	-	-	-	HTH_1,LysR_substrate
DYD3_k127_5547825_5	264462.Bd3688	6.282e-107	354.0	COG0583@1|root,COG0583@2|Bacteria,1MU2E@1224|Proteobacteria,42T5W@68525|delta/epsilon subdivisions,2MTTD@213481|Bdellovibrionales,2WPVR@28221|Deltaproteobacteria	213481|Bdellovibrionales	K	transcriptional regulator	-	-	-	-	-	-	-	-	-	-	-	-	HTH_1,LysR_substrate
DYD3_k127_5547825_13	264462.Bd3691	2.351e-29	122.0	COG4925@1|root,COG4925@2|Bacteria,1N8YU@1224|Proteobacteria,42WAU@68525|delta/epsilon subdivisions,2MUJY@213481|Bdellovibrionales,2X320@28221|Deltaproteobacteria	213481|Bdellovibrionales	I	sulfurtransferase activity	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_5547825_6	338963.Pcar_1081	3.081e-87	295.0	COG1028@1|root,COG1028@2|Bacteria,1R413@1224|Proteobacteria,42S6B@68525|delta/epsilon subdivisions,2WNKV@28221|Deltaproteobacteria	28221|Deltaproteobacteria	IQ	short-chain dehydrogenase	-	-	-	-	-	-	-	-	-	-	-	-	adh_short_C2
DYD3_k127_5547825_10	1192868.CAIU01000023_gene3381	7.24e-47	177.0	COG0725@1|root,COG0725@2|Bacteria,1MVNA@1224|Proteobacteria,2U5B1@28211|Alphaproteobacteria,43ICA@69277|Phyllobacteriaceae	28211|Alphaproteobacteria	P	Molybdenum ABC transporter	modA	GO:0003674,GO:0003824,GO:0005215,GO:0005488,GO:0005575,GO:0005623,GO:0006810,GO:0006811,GO:0006820,GO:0008150,GO:0008509,GO:0015075,GO:0015098,GO:0015103,GO:0015318,GO:0015399,GO:0015405,GO:0015412,GO:0015689,GO:0015698,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0022804,GO:0022857,GO:0030151,GO:0030288,GO:0030313,GO:0030973,GO:0031975,GO:0034220,GO:0042597,GO:0042623,GO:0042626,GO:0043167,GO:0043168,GO:0043169,GO:0043225,GO:0043492,GO:0044464,GO:0046872,GO:0046914,GO:0051179,GO:0051234,GO:0055085,GO:0098656,GO:0099133,GO:1901359	-	ko:K02020	ko02010,map02010	M00189	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.8	-	-	SBP_bac_11
DYD3_k127_5547825_9	871585.BDGL_001121	6.029e-54	197.0	COG4149@1|root,COG4149@2|Bacteria,1MUXR@1224|Proteobacteria,1RRDV@1236|Gammaproteobacteria,3NM0V@468|Moraxellaceae	1236|Gammaproteobacteria	P	COG4149 ABC-type molybdate transport system, permease component	modB	GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0044425,GO:0044459,GO:0044464,GO:0071944	-	ko:K02018	ko02010,map02010	M00189	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.8	-	iECO103_1326.ECO103_0752	BPD_transp_1
DYD3_k127_5547825_14	1123288.SOV_1c06280	4.278e-28	122.0	COG3842@1|root,COG3842@2|Bacteria,1TP2M@1239|Firmicutes,4H2BP@909932|Negativicutes	909932|Negativicutes	P	Belongs to the ABC transporter superfamily	-	-	-	-	-	-	-	-	-	-	-	-	ABC_tran
DYD3_k127_5547825_7	582744.Msip34_1375	6.341e-78	271.0	COG0583@1|root,COG0583@2|Bacteria,1N0C1@1224|Proteobacteria,2VM51@28216|Betaproteobacteria,2KKY3@206350|Nitrosomonadales	206350|Nitrosomonadales	K	Transcriptional regulator, LysR family	-	-	-	-	-	-	-	-	-	-	-	-	HTH_1,LysR_substrate
DYD3_k127_5547825_8	1198452.Jab_1c10100	2e-58	206.0	COG2080@1|root,COG2080@2|Bacteria,1RD8C@1224|Proteobacteria,2VQ9M@28216|Betaproteobacteria,474CY@75682|Oxalobacteraceae	28216|Betaproteobacteria	C	[2Fe-2S] binding domain	iorA	-	1.3.99.16	ko:K07302	-	-	-	-	ko00000,ko01000	-	-	-	Fer2,Fer2_2
DYD3_k127_5547825_0	29581.BW37_03347	3.309e-196	635.0	COG1529@1|root,COG1529@2|Bacteria,1QTTJ@1224|Proteobacteria,2VHB9@28216|Betaproteobacteria,472UU@75682|Oxalobacteraceae	28216|Betaproteobacteria	C	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain	iorB1	-	1.3.99.16	ko:K07303	-	-	-	-	ko00000,ko01000	-	-	-	Ald_Xan_dh_C2
DYD3_k127_5547825_11	1123228.AUIH01000004_gene1086	2.166e-31	140.0	COG2068@1|root,COG2068@2|Bacteria,1MW0X@1224|Proteobacteria	1224|Proteobacteria	H	MobA-Related Protein	-	-	1.1.1.328,2.7.7.76	ko:K07141,ko:K19190	ko00760,ko00790,ko01120,map00760,map00790,map01120	-	R10131,R10132,R11582	RC03053	ko00000,ko00001,ko01000	-	-	-	NTP_transf_3
DYD3_k127_5547825_12	187272.Mlg_1569	9.567e-30	135.0	COG1975@1|root,COG1975@2|Bacteria,1MWFN@1224|Proteobacteria	1224|Proteobacteria	O	Xanthine and CO dehydrogenases maturation factor XdhC CoxF family	yqeB	-	-	ko:K07402	-	-	-	-	ko00000	-	-	-	XdhC_C,XdhC_CoxI
DYD3_k127_5547825_16	323848.Nmul_A0700	2.481e-16	85.0	COG0822@1|root,COG0822@2|Bacteria,1PC9F@1224|Proteobacteria,2VS65@28216|Betaproteobacteria,372KK@32003|Nitrosomonadales	28216|Betaproteobacteria	C	NifU-like N terminal domain	-	-	-	ko:K04488	-	-	-	-	ko00000	-	-	-	NifU_N
DYD3_k127_5547825_1	1147.D082_20420	5.046e-131	428.0	COG0303@1|root,COG0303@2|Bacteria,1G0K2@1117|Cyanobacteria,1H5VW@1142|Synechocystis	1117|Cyanobacteria	F	MoeA C-terminal region (domain IV)	moeA	GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006163,GO:0006464,GO:0006725,GO:0006732,GO:0006753,GO:0006777,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009116,GO:0009117,GO:0009119,GO:0009141,GO:0009144,GO:0009150,GO:0009199,GO:0009205,GO:0009259,GO:0009987,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0018315,GO:0019538,GO:0019637,GO:0019693,GO:0019720,GO:0032324,GO:0034641,GO:0036211,GO:0042040,GO:0042278,GO:0043170,GO:0043412,GO:0043545,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044281,GO:0044424,GO:0044464,GO:0046039,GO:0046128,GO:0046483,GO:0051186,GO:0051188,GO:0051189,GO:0055086,GO:0061598,GO:0061599,GO:0070566,GO:0071704,GO:0072521,GO:0090407,GO:1901068,GO:1901135,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657	2.10.1.1	ko:K03750	ko00790,ko01100,map00790,map01100	-	R09735	RC03462	ko00000,ko00001,ko01000	-	-	-	MoCF_biosynth,MoeA_C,MoeA_N
DYD3_k127_5547825_2	1147.D082_20430	7.454e-131	424.0	COG2896@1|root,COG2896@2|Bacteria,1G0VS@1117|Cyanobacteria,1H5S2@1142|Synechocystis	1117|Cyanobacteria	F	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate	moaA	-	4.1.99.22	ko:K03639	ko00790,ko01100,ko04122,map00790,map01100,map04122	-	R09394	RC03420	ko00000,ko00001,ko01000	-	-	-	Fer4_12,Fer4_14,Mob_synth_C,Radical_SAM
DYD3_k127_5547825_3	862908.BMS_1166	2.328e-128	420.0	COG0315@1|root,COG0746@1|root,COG0315@2|Bacteria,COG0746@2|Bacteria,1RCYZ@1224|Proteobacteria,42SNY@68525|delta/epsilon subdivisions,2WP2P@28221|Deltaproteobacteria	28221|Deltaproteobacteria	H	Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP)	moaC	-	4.6.1.17	ko:K03637	ko00790,ko01100,ko04122,map00790,map01100,map04122	-	R11372	RC03425	ko00000,ko00001,ko01000	-	-	-	MoaC
DYD3_k127_5547825_15	862908.BMS_1167	2.626e-22	98.0	COG1977@1|root,COG1977@2|Bacteria	2|Bacteria	H	Mo-molybdopterin cofactor metabolic process	moaD	GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006732,GO:0006777,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009987,GO:0018130,GO:0019538,GO:0019637,GO:0019720,GO:0043170,GO:0043545,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0051186,GO:0051188,GO:0051189,GO:0071704,GO:0090407,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576	2.7.7.77,2.8.1.12,4.6.1.17	ko:K03636,ko:K03637,ko:K03752,ko:K21142	ko00790,ko01100,ko04122,map00790,map01100,map04122	-	R09395,R11372,R11581	RC02507,RC03425	ko00000,ko00001,ko01000	-	-	iE2348C_1286.E2348C_0736,iEC55989_1330.EC55989_0827,iG2583_1286.G2583_1012,iLF82_1304.LF82_1368,iNRG857_1313.NRG857_03495,iSFV_1184.SFV_0767,iSF_1195.SF0734,iSFxv_1172.SFxv_0800,iSSON_1240.SSON_0763,iS_1188.S0775	ThiS
DYD3_k127_5547825_4	862908.BMS_1168	2.458e-113	373.0	COG0314@1|root,COG0476@1|root,COG0607@1|root,COG0314@2|Bacteria,COG0476@2|Bacteria,COG0607@2|Bacteria,1MW7H@1224|Proteobacteria,42NEC@68525|delta/epsilon subdivisions,2WK08@28221|Deltaproteobacteria	28221|Deltaproteobacteria	H	PFAM UBA THIF-type NAD FAD binding protein	-	-	2.7.7.80,2.8.1.11	ko:K21147	ko04122,map04122	-	R07459,R07461	RC00043	ko00000,ko00001,ko01000	-	-	-	ThiF
DYD3_k127_5549010_0	926549.KI421517_gene3031	7.79e-126	414.0	COG3386@1|root,COG3386@2|Bacteria,4NFRT@976|Bacteroidetes,47PGT@768503|Cytophagia	976|Bacteroidetes	G	Major royal jelly protein	-	-	-	-	-	-	-	-	-	-	-	-	MRJP
DYD3_k127_5561421_3	1353529.M899_3356	2.895e-174	554.0	COG0439@1|root,COG0439@2|Bacteria,1MU4H@1224|Proteobacteria,42M14@68525|delta/epsilon subdivisions,2MTQX@213481|Bdellovibrionales,2WIN7@28221|Deltaproteobacteria	213481|Bdellovibrionales	I	Biotin carboxylase	-	-	6.3.4.14,6.4.1.2	ko:K01961	ko00061,ko00620,ko00640,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00061,map00620,map00640,map00720,map01100,map01110,map01120,map01130,map01200,map01212	M00082,M00376	R00742,R04385	RC00040,RC00253,RC00367	ko00000,ko00001,ko00002,ko01000	-	-	-	Biotin_carb_C,Biotin_carb_N,CPSase_L_D2
DYD3_k127_5561421_12	862908.BMS_3268	5.713e-34	136.0	COG4770@1|root,COG4770@2|Bacteria,1NG94@1224|Proteobacteria,43DBI@68525|delta/epsilon subdivisions,2MTJ9@213481|Bdellovibrionales,2WSN8@28221|Deltaproteobacteria	213481|Bdellovibrionales	I	Biotin-requiring enzyme	-	-	-	-	-	-	-	-	-	-	-	-	Biotin_lipoyl
DYD3_k127_5561421_9	1201288.M900_2650	3.569e-42	162.0	2E05E@1|root,32VTR@2|Bacteria,1N5CW@1224|Proteobacteria,431HU@68525|delta/epsilon subdivisions,2MTES@213481|Bdellovibrionales,2WWRZ@28221|Deltaproteobacteria	213481|Bdellovibrionales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_5561421_1	1353529.M899_3329	4.444e-290	914.0	COG0612@1|root,COG0612@2|Bacteria,1MVST@1224|Proteobacteria,42N0H@68525|delta/epsilon subdivisions,2MSU2@213481|Bdellovibrionales,2WIYD@28221|Deltaproteobacteria	213481|Bdellovibrionales	S	Belongs to the peptidase M16 family	-	-	-	ko:K07263	-	-	-	-	ko00000,ko01000,ko01002	-	-	-	Peptidase_M16,Peptidase_M16_C
DYD3_k127_5561421_7	1353529.M899_3328	6.461e-105	353.0	COG0635@1|root,COG0635@2|Bacteria,1MU76@1224|Proteobacteria,42NGU@68525|delta/epsilon subdivisions,2MT5Y@213481|Bdellovibrionales,2WIM5@28221|Deltaproteobacteria	213481|Bdellovibrionales	H	Involved in the biosynthesis of porphyrin-containing compound	hemN	-	-	-	-	-	-	-	-	-	-	-	HemN_C,Radical_SAM
DYD3_k127_5561421_8	862908.BMS_3244	1.641e-51	188.0	COG0576@1|root,COG0576@2|Bacteria,1RH8T@1224|Proteobacteria,42TM2@68525|delta/epsilon subdivisions,2MTA1@213481|Bdellovibrionales,2WQ0U@28221|Deltaproteobacteria	213481|Bdellovibrionales	O	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ	grpE	GO:0000166,GO:0000774,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0017076,GO:0030234,GO:0030554,GO:0036094,GO:0044424,GO:0044444,GO:0044464,GO:0050790,GO:0051082,GO:0060589,GO:0060590,GO:0065007,GO:0065009,GO:0097159,GO:0098772,GO:1901265,GO:1901363	-	ko:K03687	-	-	-	-	ko00000,ko03029,ko03110	-	-	-	GrpE
DYD3_k127_5561421_0	1353529.M899_3326	2.069e-310	961.0	COG0443@1|root,COG0443@2|Bacteria,1MVEN@1224|Proteobacteria,42M64@68525|delta/epsilon subdivisions,2MSTU@213481|Bdellovibrionales,2WIWS@28221|Deltaproteobacteria	213481|Bdellovibrionales	O	Heat shock 70 kDa protein	dnaK	-	-	ko:K04043	ko03018,ko04212,ko05152,map03018,map04212,map05152	-	-	-	ko00000,ko00001,ko03019,ko03029,ko03110,ko04147	1.A.33.1	-	-	HSP70
DYD3_k127_5561421_4	1353529.M899_3325	2.072e-162	519.0	COG0484@1|root,COG0484@2|Bacteria,1MVMS@1224|Proteobacteria,42KZM@68525|delta/epsilon subdivisions,2MSQ1@213481|Bdellovibrionales,2WJGP@28221|Deltaproteobacteria	213481|Bdellovibrionales	O	ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins	dnaJ	-	-	ko:K03686	-	-	-	-	ko00000,ko03029,ko03110	-	-	-	DnaJ,DnaJ_C,DnaJ_CXXCXGXG
DYD3_k127_5561421_5	1353529.M899_3322	2.797e-137	459.0	COG0683@1|root,COG0683@2|Bacteria,1R8IG@1224|Proteobacteria,42N7H@68525|delta/epsilon subdivisions,2MT54@213481|Bdellovibrionales,2WIUQ@28221|Deltaproteobacteria	213481|Bdellovibrionales	E	ABC-type branched-chain amino acid transport	-	-	-	ko:K07121	-	-	-	-	ko00000	-	-	-	LppC,Peripla_BP_6,TPR_16,TPR_6
DYD3_k127_5561421_10	765869.BDW_00510	1.585e-38	151.0	COG0634@1|root,COG0634@2|Bacteria,1NRT8@1224|Proteobacteria,42SNI@68525|delta/epsilon subdivisions,2MTQ8@213481|Bdellovibrionales,2WPFN@28221|Deltaproteobacteria	213481|Bdellovibrionales	F	Belongs to the purine pyrimidine phosphoribosyltransferase family	hpt	-	2.4.2.8	ko:K00760	ko00230,ko00983,ko01100,ko01110,map00230,map00983,map01100,map01110	-	R00190,R01132,R01229,R02142,R08237,R08238,R08245	RC00063,RC00122	ko00000,ko00001,ko01000	-	-	-	Pribosyltran
DYD3_k127_5561421_2	862908.BMS_3235	2.598e-202	633.0	COG1077@1|root,COG1077@2|Bacteria,1MUMW@1224|Proteobacteria,42M1J@68525|delta/epsilon subdivisions,2MSTQ@213481|Bdellovibrionales,2WIQR@28221|Deltaproteobacteria	213481|Bdellovibrionales	D	Cell shape determining protein MreB Mrl	mreB	-	-	ko:K03569	-	-	-	-	ko00000,ko02048,ko03036,ko04812	1.A.33.1,9.B.157.1	-	-	MreB_Mbl
DYD3_k127_5561421_6	1353529.M899_3315	7.382e-124	403.0	COG1472@1|root,COG1472@2|Bacteria,1MVAJ@1224|Proteobacteria,42N8K@68525|delta/epsilon subdivisions,2MSTA@213481|Bdellovibrionales,2WN0Z@28221|Deltaproteobacteria	213481|Bdellovibrionales	G	PFAM glycoside hydrolase, family 3 domain protein	-	-	3.2.1.52	ko:K01207	ko00520,ko00531,ko01100,ko01501,map00520,map00531,map01100,map01501	M00628	R00022,R05963,R07809,R07810,R10831	RC00049	ko00000,ko00001,ko00002,ko01000	-	-	-	Glyco_hydro_3,Glyco_hydro_3_C
DYD3_k127_556874_8	1123399.AQVE01000022_gene371	1.959e-31	125.0	COG3323@1|root,COG3323@2|Bacteria,1MZF5@1224|Proteobacteria,1S8WV@1236|Gammaproteobacteria,4610A@72273|Thiotrichales	72273|Thiotrichales	S	protein conserved in bacteria	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_556874_0	1353529.M899_1590	5.877e-96	323.0	COG0501@1|root,COG0501@2|Bacteria,1NF76@1224|Proteobacteria,42WFB@68525|delta/epsilon subdivisions,2MTHK@213481|Bdellovibrionales,2WSAI@28221|Deltaproteobacteria	213481|Bdellovibrionales	O	Belongs to the peptidase M48B family	-	-	-	-	-	-	-	-	-	-	-	-	Peptidase_M48
DYD3_k127_556874_3	1353529.M899_1590	1.292e-77	268.0	COG0501@1|root,COG0501@2|Bacteria,1NF76@1224|Proteobacteria,42WFB@68525|delta/epsilon subdivisions,2MTHK@213481|Bdellovibrionales,2WSAI@28221|Deltaproteobacteria	213481|Bdellovibrionales	O	Belongs to the peptidase M48B family	-	-	-	-	-	-	-	-	-	-	-	-	Peptidase_M48
DYD3_k127_556874_4	862908.BMS_1850	2.2e-71	248.0	COG0545@1|root,COG0545@2|Bacteria,1RDA1@1224|Proteobacteria,42QU4@68525|delta/epsilon subdivisions,2MT0Z@213481|Bdellovibrionales,2WMRQ@28221|Deltaproteobacteria	213481|Bdellovibrionales	M	peptidylprolyl isomerase, FKBP-type	-	-	5.2.1.8	ko:K03772	-	-	-	-	ko00000,ko01000,ko03110	-	-	-	FKBP_C,FKBP_N
DYD3_k127_556874_10	1408823.AXUS01000007_gene3031	2.896e-13	80.0	COG0609@1|root,COG0609@2|Bacteria,1TPX6@1239|Firmicutes,248IS@186801|Clostridia,25R88@186804|Peptostreptococcaceae	186801|Clostridia	P	FecCD transport family	btuC	-	-	ko:K02015	ko02010,map02010	M00240	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.14	-	-	FecCD
DYD3_k127_556874_9	1184251.TCELL_0265	3.524e-14	80.0	COG1245@1|root,arCOG00187@2157|Archaea,2XPQF@28889|Crenarchaeota	28889|Crenarchaeota	E	in RNase L inhibitor, RLI	-	-	-	ko:K06174	-	-	-	-	ko00000,ko03009	-	-	-	ABC_tran,Fer4,Fer4_6,RLI
DYD3_k127_556874_2	1201288.M900_1984	7.198e-87	301.0	COG4783@1|root,COG4783@2|Bacteria,1MVFV@1224|Proteobacteria,42P1P@68525|delta/epsilon subdivisions,2WJ99@28221|Deltaproteobacteria	28221|Deltaproteobacteria	S	PFAM peptidase M48 Ste24p	-	-	-	-	-	-	-	-	-	-	-	-	Peptidase_M48,TAT_signal,TPR_16,TPR_19
DYD3_k127_556874_6	862908.BMS_1852	2.451e-50	188.0	COG0328@1|root,COG0328@2|Bacteria,1RCZ1@1224|Proteobacteria,42SIR@68525|delta/epsilon subdivisions,2MT3N@213481|Bdellovibrionales,2WPJY@28221|Deltaproteobacteria	213481|Bdellovibrionales	L	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids	rnhA	GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004523,GO:0004540,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006271,GO:0006273,GO:0006401,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009987,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0019439,GO:0022616,GO:0033567,GO:0034641,GO:0034645,GO:0034655,GO:0043137,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044270,GO:0046483,GO:0046700,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0140098,GO:1901360,GO:1901361,GO:1901575,GO:1901576	3.1.26.4	ko:K03469	ko03030,map03030	-	-	-	ko00000,ko00001,ko01000,ko03032	-	-	-	RNase_H
DYD3_k127_556874_5	1353529.M899_1585	1.059e-51	192.0	COG0720@1|root,COG0720@2|Bacteria,1N10D@1224|Proteobacteria,432ZQ@68525|delta/epsilon subdivisions,2MTG0@213481|Bdellovibrionales,2WXIG@28221|Deltaproteobacteria	213481|Bdellovibrionales	H	6-pyruvoyl-tetrahydropterin synthase	-	-	4.1.2.50,4.2.3.12	ko:K01737	ko00790,ko01100,map00790,map01100	M00842,M00843	R04286,R09959	RC01117,RC02846,RC02847	ko00000,ko00001,ko00002,ko01000,ko03016	-	-	-	PTPS
DYD3_k127_556874_1	1353529.M899_1584	3.681e-88	296.0	COG2866@1|root,COG2866@2|Bacteria,1N9AY@1224|Proteobacteria,430W9@68525|delta/epsilon subdivisions,2MSZJ@213481|Bdellovibrionales,2WW2T@28221|Deltaproteobacteria	213481|Bdellovibrionales	E	carboxypeptidase	-	-	-	ko:K14054	-	-	-	-	ko00000	-	-	-	AstE_AspA,Peptidase_M14
DYD3_k127_5571823_1	1437425.CSEC_0885	1.267e-87	295.0	COG0603@1|root,COG0603@2|Bacteria,2JFYE@204428|Chlamydiae	204428|Chlamydiae	F	Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0))	-	-	6.3.4.20	ko:K06920	ko00790,ko01100,map00790,map01100	-	R09978	RC00959	ko00000,ko00001,ko01000,ko03016	-	-	-	QueC
DYD3_k127_5571823_0	1396858.Q666_01595	8.139e-131	424.0	COG1087@1|root,COG1087@2|Bacteria,1MUHI@1224|Proteobacteria,1RMTU@1236|Gammaproteobacteria,464WV@72275|Alteromonadaceae	1236|Gammaproteobacteria	M	UDP-glucose 4-epimerase	galE	-	5.1.3.2,5.1.3.5	ko:K01784,ko:K12448	ko00052,ko00520,ko01100,map00052,map00520,map01100	M00361,M00362,M00632	R00291,R01473,R02984	RC00289,RC00528	ko00000,ko00001,ko00002,ko01000	-	-	-	Epimerase,GDP_Man_Dehyd
DYD3_k127_5571823_3	1201288.M900_A0230	7.092e-22	100.0	COG0262@1|root,COG0262@2|Bacteria,1RH0P@1224|Proteobacteria,42UMS@68525|delta/epsilon subdivisions,2MT9S@213481|Bdellovibrionales,2WQA3@28221|Deltaproteobacteria	213481|Bdellovibrionales	H	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis	folA	-	1.5.1.3	ko:K00287,ko:K18589	ko00670,ko00790,ko01100,ko01523,map00670,map00790,map01100,map01523	M00126,M00840	R00936,R00937,R00939,R00940,R02235,R02236,R11765	RC00109,RC00110,RC00158	br01600,ko00000,ko00001,ko00002,ko01000,ko01504	-	-	-	DHFR_1
DYD3_k127_5571823_5	706436.HMPREF9074_07523	4.998e-08	64.0	COG2849@1|root,COG2849@2|Bacteria,4NQZT@976|Bacteroidetes,1I3HG@117743|Flavobacteriia,1ERE3@1016|Capnocytophaga	976|Bacteroidetes	S	MORN repeat protein	-	-	-	-	-	-	-	-	-	-	-	-	MORN_2
DYD3_k127_5571823_2	1121451.DESAM_22201	2.468e-78	274.0	COG0438@1|root,COG0438@2|Bacteria,1NF2Z@1224|Proteobacteria,42V61@68525|delta/epsilon subdivisions,2WS5P@28221|Deltaproteobacteria,2M8T0@213115|Desulfovibrionales	28221|Deltaproteobacteria	M	glycosyl transferase group 1	-	-	-	-	-	-	-	-	-	-	-	-	Glyco_trans_4_2,Glyco_transf_4,Glycos_transf_1
DYD3_k127_5571823_4	862908.BMS_3173	9.422e-15	78.0	COG4191@1|root,COG4191@2|Bacteria	2|Bacteria	T	Histidine kinase	-	-	2.7.13.3	ko:K15011	ko02020,map02020	M00523	-	-	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	-	-	-	HATPase_c,HisKA,HisKA_7TM,Peripla_BP_3
DYD3_k127_5632498_0	862908.BMS_0147	0.0	1214.0	COG0466@1|root,COG0466@2|Bacteria,1NTR5@1224|Proteobacteria,42MGH@68525|delta/epsilon subdivisions,2MUPF@213481|Bdellovibrionales,2WK72@28221|Deltaproteobacteria	213481|Bdellovibrionales	O	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner	lon_1	-	3.4.21.53	ko:K01338	ko04112,map04112	-	-	-	ko00000,ko00001,ko01000,ko01002	-	-	-	AAA,LON_substr_bdg,Lon_C
DYD3_k127_5632498_3	862908.BMS_0145	1.574e-63	239.0	COG5549@1|root,COG5549@2|Bacteria	2|Bacteria	O	protein import	-	-	-	-	-	-	-	-	-	-	-	-	DUF4214,DUF4953,DUF5117,DUF5118,MACPF,Peptidase_M10,Peptidase_M43
DYD3_k127_5632498_1	1353529.M899_0149	1.239e-219	711.0	COG0178@1|root,COG0178@2|Bacteria,1MW0W@1224|Proteobacteria,42P3V@68525|delta/epsilon subdivisions,2MUPP@213481|Bdellovibrionales,2WKWV@28221|Deltaproteobacteria	213481|Bdellovibrionales	L	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate	uvrA1	-	-	ko:K03701	ko03420,map03420	-	-	-	ko00000,ko00001,ko03400	-	-	-	ABC_tran
DYD3_k127_5632498_5	1353529.M899_0148	5.986e-53	189.0	COG0103@1|root,COG0103@2|Bacteria,1RD4A@1224|Proteobacteria,42SVI@68525|delta/epsilon subdivisions,2MT6F@213481|Bdellovibrionales,2WP7T@28221|Deltaproteobacteria	213481|Bdellovibrionales	J	Belongs to the universal ribosomal protein uS9 family	rpsI	-	-	ko:K02996	ko03010,map03010	M00178,M00179	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_S9
DYD3_k127_5632498_4	862908.BMS_0141	1.762e-60	213.0	COG0102@1|root,COG0102@2|Bacteria,1RA11@1224|Proteobacteria,42SD5@68525|delta/epsilon subdivisions,2MT6N@213481|Bdellovibrionales,2WP5M@28221|Deltaproteobacteria	213481|Bdellovibrionales	J	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly	rplM	GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904	-	ko:K02871	ko03010,map03010	M00178,M00179	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_L13
DYD3_k127_5632498_2	1353529.M899_0146	4.389e-160	538.0	COG4775@1|root,COG4775@2|Bacteria,1R75N@1224|Proteobacteria,42MIG@68525|delta/epsilon subdivisions,2MSZW@213481|Bdellovibrionales,2WMI0@28221|Deltaproteobacteria	213481|Bdellovibrionales	M	Surface antigen	-	-	-	ko:K07277	-	-	-	-	ko00000,ko02000,ko03029	1.B.33	-	-	Bac_surface_Ag,POTRA
DYD3_k127_5632498_6	1201288.M900_0205	6.067e-51	203.0	COG2911@1|root,COG2911@2|Bacteria,1PQTA@1224|Proteobacteria,42PYT@68525|delta/epsilon subdivisions,2MT6E@213481|Bdellovibrionales,2WIZ6@28221|Deltaproteobacteria	213481|Bdellovibrionales	M	TamB, inner membrane protein subunit of TAM complex	-	-	-	ko:K09800	-	-	-	-	ko00000,ko02000	-	-	-	TamB
DYD3_k127_5646208_1	1121428.DESHY_160233___1	1.783e-06	52.0	2DR59@1|root,33A7S@2|Bacteria	2|Bacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_5646208_0	1201288.M900_1417	2.28e-44	187.0	COG1196@1|root,COG1196@2|Bacteria,1QX7E@1224|Proteobacteria	1224|Proteobacteria	D	nuclear chromosome segregation	aglZ	-	-	-	-	-	-	-	-	-	-	-	Response_reg
DYD3_k127_5669059_6	1353529.M899_1971	4.142e-64	226.0	COG0558@1|root,COG0558@2|Bacteria,1RCZ7@1224|Proteobacteria,42QQ4@68525|delta/epsilon subdivisions,2MT9Y@213481|Bdellovibrionales,2WQGH@28221|Deltaproteobacteria	213481|Bdellovibrionales	I	Belongs to the CDP-alcohol phosphatidyltransferase class-I family	pgsA	-	2.7.8.5	ko:K00995	ko00564,ko01100,map00564,map01100	-	R01801	RC00002,RC00017,RC02795	ko00000,ko00001,ko01000	-	-	-	CDP-OH_P_transf
DYD3_k127_5669059_4	862908.BMS_1543	1.464e-85	292.0	COG0560@1|root,COG3830@1|root,COG0560@2|Bacteria,COG3830@2|Bacteria,1MWA3@1224|Proteobacteria,42NIR@68525|delta/epsilon subdivisions,2WIVQ@28221|Deltaproteobacteria	28221|Deltaproteobacteria	E	phosphoserine phosphatase SerB	serB	-	3.1.3.3	ko:K01079	ko00260,ko00680,ko01100,ko01120,ko01130,ko01200,ko01230,map00260,map00680,map01100,map01120,map01130,map01200,map01230	M00020	R00582	RC00017	ko00000,ko00001,ko00002,ko01000,ko01009	-	-	-	ACT_6,HAD
DYD3_k127_5669059_13	944435.AXAJ01000005_gene3659	1.623e-07	61.0	COG0515@1|root,COG4886@1|root,COG0515@2|Bacteria,COG4886@2|Bacteria,1Q94S@1224|Proteobacteria,2VIVY@28216|Betaproteobacteria,1K3E6@119060|Burkholderiaceae	28216|Betaproteobacteria	KLT	leucine-rich repeat-containing protein typical subtype	-	-	-	-	-	-	-	-	-	-	-	-	LRR_4,LRR_8,Pkinase,Pkinase_Tyr
DYD3_k127_5669059_11	1184267.A11Q_1966	2.521e-14	79.0	2EPCM@1|root,33GZA@2|Bacteria,1P83I@1224|Proteobacteria,43259@68525|delta/epsilon subdivisions,2MUHK@213481|Bdellovibrionales,2WXKQ@28221|Deltaproteobacteria	213481|Bdellovibrionales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_5669059_12	862908.BMS_1595	1e-12	74.0	2EPCM@1|root,33GZA@2|Bacteria,1P83I@1224|Proteobacteria,43259@68525|delta/epsilon subdivisions,2MUHK@213481|Bdellovibrionales,2WXKQ@28221|Deltaproteobacteria	213481|Bdellovibrionales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_5669059_7	1201290.M902_1802	2.094e-36	146.0	COG3121@1|root,COG3121@2|Bacteria,1N2NQ@1224|Proteobacteria,42X6X@68525|delta/epsilon subdivisions,2WTBR@28221|Deltaproteobacteria	28221|Deltaproteobacteria	NU	Pili and flagellar-assembly chaperone, PapD N-terminal domain	-	-	-	ko:K07346	-	-	-	-	ko00000,ko02035,ko02044,ko03110	-	-	-	PapD_N
DYD3_k127_5669059_1	1201290.M902_1803	1.072e-124	428.0	COG3188@1|root,COG3188@2|Bacteria,1MWV6@1224|Proteobacteria	1224|Proteobacteria	NU	Usher protein	csuD	-	-	ko:K07347	ko05133,map05133	-	-	-	ko00000,ko00001,ko02000,ko02035,ko02044	1.B.11.3	-	-	Usher
DYD3_k127_5669059_8	1353529.M899_0832	3.33e-35	146.0	COG5430@1|root,COG5430@2|Bacteria	2|Bacteria	S	Spore Coat Protein U domain	-	-	-	-	-	-	-	-	-	-	-	-	SCPU
DYD3_k127_5669059_3	862908.BMS_2112	4.511e-96	324.0	COG2220@1|root,COG2220@2|Bacteria,1MV20@1224|Proteobacteria,42QPP@68525|delta/epsilon subdivisions,2MTXU@213481|Bdellovibrionales,2X5P5@28221|Deltaproteobacteria	213481|Bdellovibrionales	S	Beta-lactamase superfamily domain	-	-	-	-	-	-	-	-	-	-	-	-	Lactamase_B_2
DYD3_k127_5669059_0	1353529.M899_1978	0.0	1093.0	COG0542@1|root,COG0542@2|Bacteria,1MURH@1224|Proteobacteria,42M9S@68525|delta/epsilon subdivisions,2MSQH@213481|Bdellovibrionales,2WJSZ@28221|Deltaproteobacteria	213481|Bdellovibrionales	O	Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE	clpB	-	-	ko:K03695,ko:K03696	ko01100,ko04213,map01100,map04213	-	-	-	ko00000,ko00001,ko03110	-	-	-	AAA,AAA_2,ClpB_D2-small,Clp_N
DYD3_k127_5669059_5	1353529.M899_0703	1.156e-64	233.0	COG5459@1|root,COG5459@2|Bacteria,1MWMM@1224|Proteobacteria,42WIB@68525|delta/epsilon subdivisions,2MTDV@213481|Bdellovibrionales,2WRHR@28221|Deltaproteobacteria	213481|Bdellovibrionales	J	PFAM Ribosomal small subunit Rsm22	-	-	-	-	-	-	-	-	-	-	-	-	Rsm22
DYD3_k127_5669059_2	215803.DB30_1546	5.793e-122	399.0	COG1052@1|root,COG1052@2|Bacteria,1MVSS@1224|Proteobacteria,42SDC@68525|delta/epsilon subdivisions,2WUD9@28221|Deltaproteobacteria,2YUFK@29|Myxococcales	28221|Deltaproteobacteria	C	D-isomer specific 2-hydroxyacid dehydrogenase	-	-	1.1.1.28	ko:K03778	ko00620,ko01120,map00620,map01120	-	R00704	RC00044	ko00000,ko00001,ko01000	-	-	-	2-Hacid_dh,2-Hacid_dh_C
DYD3_k127_5669059_9	862908.BMS_2280	1.63e-23	105.0	COG1226@1|root,COG1226@2|Bacteria	2|Bacteria	P	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)	kch	-	-	ko:K10716	-	-	-	-	ko00000,ko02000	1.A.1.1,1.A.1.13,1.A.1.17,1.A.1.24,1.A.1.25,1.A.1.6	-	-	Ion_trans_2,TrkA_C,TrkA_N
DYD3_k127_5697835_19	1232683.ADIMK_1782	4.95e-58	211.0	COG0564@1|root,COG0564@2|Bacteria,1R4IN@1224|Proteobacteria,1S0WR@1236|Gammaproteobacteria,466SG@72275|Alteromonadaceae	1236|Gammaproteobacteria	J	COG0564 Pseudouridylate synthases, 23S RNA-specific	-	-	5.4.99.28,5.4.99.29	ko:K06177	-	-	-	-	ko00000,ko01000,ko03009,ko03016	-	-	-	PseudoU_synth_2
DYD3_k127_5697835_21	1201288.M900_0688	3.331e-50	185.0	COG0237@1|root,COG0237@2|Bacteria,1RCXT@1224|Proteobacteria,42RI5@68525|delta/epsilon subdivisions,2MT77@213481|Bdellovibrionales,2WPDF@28221|Deltaproteobacteria	213481|Bdellovibrionales	F	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A	coaE	GO:0003674,GO:0003824,GO:0004140,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006732,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0015936,GO:0015937,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0033865,GO:0033866,GO:0033875,GO:0034030,GO:0034032,GO:0034033,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046390,GO:0046483,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576	2.7.1.24	ko:K00859	ko00770,ko01100,map00770,map01100	M00120	R00130	RC00002,RC00078	ko00000,ko00001,ko00002,ko01000	-	-	-	CoaE
DYD3_k127_5697835_14	1353529.M899_2974	7.806e-91	305.0	COG1694@1|root,COG3956@2|Bacteria,1MVKM@1224|Proteobacteria,42R48@68525|delta/epsilon subdivisions,2MSX7@213481|Bdellovibrionales,2WMAR@28221|Deltaproteobacteria	213481|Bdellovibrionales	E	TIGRFAM MazG family protein	mazG	-	3.6.1.9	ko:K02499,ko:K04765	ko00230,ko00240,ko00760,ko00770,ko01100,map00230,map00240,map00760,map00770,map01100	-	R00086,R00087,R00103,R00287,R00426,R00515,R00662,R00720,R03004,R03036,R11323	RC00002	ko00000,ko00001,ko01000,ko03036	-	-	-	MazG
DYD3_k127_5697835_30	1353529.M899_2973	9.202e-30	124.0	COG0319@1|root,COG0319@2|Bacteria,1MZ67@1224|Proteobacteria,42TCJ@68525|delta/epsilon subdivisions,2MTFA@213481|Bdellovibrionales,2WPMW@28221|Deltaproteobacteria	213481|Bdellovibrionales	J	Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA	ybeY	-	-	ko:K07042	-	-	-	-	ko00000,ko03009	-	-	-	UPF0054
DYD3_k127_5697835_6	862908.BMS_2097	2.899e-124	412.0	COG1404@1|root,COG1404@2|Bacteria,1MU3S@1224|Proteobacteria,42Q3Z@68525|delta/epsilon subdivisions	1224|Proteobacteria	O	Belongs to the peptidase S8 family	-	-	-	-	-	-	-	-	-	-	-	-	Peptidase_S8
DYD3_k127_5697835_25	1353529.M899_0583	8.398e-42	171.0	2920Y@1|root,2ZPK7@2|Bacteria,1P7G3@1224|Proteobacteria,433ID@68525|delta/epsilon subdivisions,2MTSV@213481|Bdellovibrionales,2WY2U@28221|Deltaproteobacteria	213481|Bdellovibrionales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_5697835_4	1201288.M900_0691	3.315e-150	483.0	COG1186@1|root,COG1186@2|Bacteria,1MUAW@1224|Proteobacteria,42MKD@68525|delta/epsilon subdivisions,2MSV2@213481|Bdellovibrionales,2WIZP@28221|Deltaproteobacteria	213481|Bdellovibrionales	J	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA	prfB	-	-	ko:K02836	-	-	-	-	ko00000,ko03012	-	-	-	PCRF,RF-1
DYD3_k127_5697835_3	443143.GM18_0730	4.374e-162	526.0	COG1190@1|root,COG1190@2|Bacteria,1MX1V@1224|Proteobacteria,42M90@68525|delta/epsilon subdivisions,2WJ9G@28221|Deltaproteobacteria	28221|Deltaproteobacteria	J	Belongs to the class-II aminoacyl-tRNA synthetase family	lysS	-	6.1.1.6	ko:K04567	ko00970,map00970	M00359,M00360	R03658	RC00055,RC00523	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	-	-	-	tRNA-synt_2,tRNA_anti-codon
DYD3_k127_5697835_16	862908.BMS_0575	2.775e-85	297.0	COG4591@1|root,COG4591@2|Bacteria	2|Bacteria	M	lipoprotein localization to outer membrane	lolE	-	-	ko:K02004,ko:K09808	ko02010,map02010	M00255,M00258	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1,3.A.1.125	-	-	FtsX,MacB_PCD
DYD3_k127_5697835_17	862908.BMS_0576	2.262e-82	278.0	COG1136@1|root,COG1136@2|Bacteria,1MVSQ@1224|Proteobacteria,42QNS@68525|delta/epsilon subdivisions,2MT1V@213481|Bdellovibrionales,2WMSN@28221|Deltaproteobacteria	213481|Bdellovibrionales	V	Part of the ABC transporter complex LolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone, LolA. Responsible for the formation of the LolA-lipoprotein complex in an ATP-dependent manner	lolD	-	-	ko:K09810	ko02010,map02010	M00255	-	-	ko00000,ko00001,ko00002,ko01000,ko02000	3.A.1.125	-	-	ABC_tran
DYD3_k127_5697835_1	862908.BMS_0577	1.961e-296	928.0	COG4775@1|root,COG4775@2|Bacteria,1MU0D@1224|Proteobacteria,42MMA@68525|delta/epsilon subdivisions,2MSU3@213481|Bdellovibrionales,2WIZB@28221|Deltaproteobacteria	213481|Bdellovibrionales	M	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane	bamA	-	-	ko:K07277	-	-	-	-	ko00000,ko02000,ko03029	1.B.33	-	-	Bac_surface_Ag,POTRA
DYD3_k127_5697835_23	1353529.M899_2968	2.928e-42	160.0	COG2825@1|root,COG2825@2|Bacteria,1MZVJ@1224|Proteobacteria,42VH3@68525|delta/epsilon subdivisions,2MT8X@213481|Bdellovibrionales,2WP6K@28221|Deltaproteobacteria	213481|Bdellovibrionales	M	PFAM outer membrane chaperone Skp (OmpH)	-	-	-	ko:K06142	-	-	-	-	ko00000	-	-	-	OmpH
DYD3_k127_5697835_11	1201288.M900_0696	2.387e-98	331.0	COG1044@1|root,COG1044@2|Bacteria,1MUX6@1224|Proteobacteria,42M4X@68525|delta/epsilon subdivisions,2MT57@213481|Bdellovibrionales,2WJJY@28221|Deltaproteobacteria	213481|Bdellovibrionales	M	Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell	lpxD	-	2.3.1.191	ko:K02536	ko00540,ko01100,map00540,map01100	M00060	R04550	RC00039,RC00166	ko00000,ko00001,ko00002,ko01000,ko01005	-	-	-	Hexapep,Hexapep_2
DYD3_k127_5697835_24	862908.BMS_0580	3.391e-42	160.0	COG0764@1|root,COG0764@2|Bacteria,1RH2T@1224|Proteobacteria,42SCN@68525|delta/epsilon subdivisions,2WP3E@28221|Deltaproteobacteria	28221|Deltaproteobacteria	I	Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs	-	-	4.2.1.59	ko:K02372	ko00061,ko00780,ko01100,ko01212,map00061,map00780,map01100,map01212	M00083,M00572	R04428,R04535,R04537,R04544,R04568,R04954,R04965,R07764,R10117,R10121	RC00831,RC01095	ko00000,ko00001,ko00002,ko01000,ko01004	-	-	-	FabA
DYD3_k127_5697835_8	1201288.M900_0698	2.415e-117	382.0	COG1043@1|root,COG1043@2|Bacteria,1MUHQ@1224|Proteobacteria,42NPG@68525|delta/epsilon subdivisions,2MT1S@213481|Bdellovibrionales,2WJVP@28221|Deltaproteobacteria	213481|Bdellovibrionales	M	Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell	lpxA	-	2.3.1.129	ko:K00677	ko00540,ko01100,ko01503,map00540,map01100,map01503	M00060	R04567	RC00039,RC00055	ko00000,ko00001,ko00002,ko01000,ko01005	-	-	-	Acetyltransf_11,Hexapep
DYD3_k127_5697835_12	1353529.M899_2964	2.938e-94	318.0	COG0673@1|root,COG0673@2|Bacteria,1MV7C@1224|Proteobacteria,42NV0@68525|delta/epsilon subdivisions,2MT4E@213481|Bdellovibrionales,2WK1Y@28221|Deltaproteobacteria	213481|Bdellovibrionales	S	PFAM oxidoreductase domain protein	gnnA	-	-	ko:K09949	-	-	-	-	ko00000	-	-	iAF987.Gmet_2352	GFO_IDH_MocA,GFO_IDH_MocA_C
DYD3_k127_5697835_5	1353529.M899_2963	1.526e-130	426.0	COG0763@1|root,COG0763@2|Bacteria,1MVBI@1224|Proteobacteria,42P35@68525|delta/epsilon subdivisions,2MT35@213481|Bdellovibrionales,2WJFA@28221|Deltaproteobacteria	213481|Bdellovibrionales	M	Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell	lpxB	GO:0003674,GO:0005488,GO:0005543,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006629,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008289,GO:0008610,GO:0008654,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0019637,GO:0043167,GO:0043168,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044424,GO:0044444,GO:0044464,GO:0046467,GO:0046493,GO:0071704,GO:0090407,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509	2.4.1.182	ko:K00748	ko00540,ko01100,map00540,map01100	M00060	R04606	RC00005,RC00059	ko00000,ko00001,ko00002,ko01000,ko01003,ko01005	-	GT19	-	LpxB
DYD3_k127_5697835_9	862908.BMS_0584	9.593e-109	362.0	COG1663@1|root,COG1663@2|Bacteria,1MU8G@1224|Proteobacteria,42PA2@68525|delta/epsilon subdivisions,2MT6H@213481|Bdellovibrionales,2WNJ4@28221|Deltaproteobacteria	213481|Bdellovibrionales	F	Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1- P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA)	lpxK	-	2.7.1.130	ko:K00912	ko00540,ko01100,map00540,map01100	M00060	R04657	RC00002,RC00078	ko00000,ko00001,ko00002,ko01000,ko01005	-	-	-	LpxK
DYD3_k127_5697835_20	1353529.M899_2961	1.435e-54	205.0	COG3170@1|root,COG3170@2|Bacteria,1REZ7@1224|Proteobacteria,42RFW@68525|delta/epsilon subdivisions,2MTA3@213481|Bdellovibrionales,2WNBB@28221|Deltaproteobacteria	213481|Bdellovibrionales	NU	Protein of unknown function (DUF3108)	-	-	-	-	-	-	-	-	-	-	-	-	DUF3108
DYD3_k127_5697835_2	1353529.M899_2959	8.482e-271	843.0	COG0539@1|root,COG0539@2|Bacteria,1MVAV@1224|Proteobacteria,42M29@68525|delta/epsilon subdivisions,2MST5@213481|Bdellovibrionales,2WJ0X@28221|Deltaproteobacteria	213481|Bdellovibrionales	J	thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence	rpsA	-	-	ko:K02945	ko03010,map03010	M00178	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	S1
DYD3_k127_5697835_10	1279009.ADICEAN_00526	1.727e-106	360.0	COG3250@1|root,COG3250@2|Bacteria,4NE9C@976|Bacteroidetes,47P4Y@768503|Cytophagia	976|Bacteroidetes	G	Vitamin K-dependent gamma-carboxylase	-	-	-	-	-	-	-	-	-	-	-	-	VKG_Carbox
DYD3_k127_5697835_33	502025.Hoch_2011	2.044e-24	109.0	2DMP9@1|root,32SV1@2|Bacteria,1N17Y@1224|Proteobacteria,42TQF@68525|delta/epsilon subdivisions,2WQHJ@28221|Deltaproteobacteria,2Z109@29|Myxococcales	28221|Deltaproteobacteria	S	Protein of unknown function (DUF3015)	-	-	-	-	-	-	-	-	-	-	-	-	DUF3015
DYD3_k127_5697835_36	261292.Nit79A3_1336	9.678e-13	74.0	2BGY8@1|root,32AY9@2|Bacteria,1PVZW@1224|Proteobacteria,2WBM7@28216|Betaproteobacteria,373DJ@32003|Nitrosomonadales	28216|Betaproteobacteria	M	Protein of unknown function (DUF3015)	-	-	-	-	-	-	-	-	-	-	-	-	DUF3015
DYD3_k127_5697835_13	862908.BMS_0429	1.155e-91	324.0	28J7E@1|root,2Z92U@2|Bacteria,1NAE1@1224|Proteobacteria,42P08@68525|delta/epsilon subdivisions,2MSYH@213481|Bdellovibrionales,2WJXV@28221|Deltaproteobacteria	213481|Bdellovibrionales	S	Domain of unknown function (DUF4105)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4105
DYD3_k127_5697835_31	1353529.M899_2475	1.604e-26	120.0	2FIK9@1|root,34ACA@2|Bacteria,1P27B@1224|Proteobacteria,4314P@68525|delta/epsilon subdivisions,2MT83@213481|Bdellovibrionales,2WX2C@28221|Deltaproteobacteria	213481|Bdellovibrionales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_5697835_15	765869.BDW_13235	4.813e-87	298.0	COG1092@1|root,COG1092@2|Bacteria,1QW1V@1224|Proteobacteria,42Q3P@68525|delta/epsilon subdivisions,2MTJ0@213481|Bdellovibrionales,2WJXM@28221|Deltaproteobacteria	213481|Bdellovibrionales	J	Belongs to the methyltransferase superfamily	-	-	2.1.1.173,2.1.1.191,2.1.1.264	ko:K06969,ko:K12297	-	-	R07234	RC00003	ko00000,ko01000,ko03009	-	-	-	Methyltrans_SAM
DYD3_k127_5697835_29	862908.BMS_2670	8.677e-35	135.0	COG2127@1|root,COG2127@2|Bacteria,1MZU8@1224|Proteobacteria,42TN3@68525|delta/epsilon subdivisions,2MT7G@213481|Bdellovibrionales,2WQ23@28221|Deltaproteobacteria	213481|Bdellovibrionales	S	Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation	clpS	-	-	ko:K06891	-	-	-	-	ko00000	-	-	-	ClpS
DYD3_k127_5697835_0	862908.BMS_2669	5.412e-310	968.0	COG0542@1|root,COG0542@2|Bacteria,1MV8B@1224|Proteobacteria,42M2T@68525|delta/epsilon subdivisions,2MSSC@213481|Bdellovibrionales,2WJ2W@28221|Deltaproteobacteria	213481|Bdellovibrionales	O	Belongs to the ClpA ClpB family	clpA	-	-	ko:K03694	-	-	-	-	ko00000,ko03110	-	-	-	AAA,AAA_2,ClpB_D2-small,Clp_N
DYD3_k127_5697835_22	243090.RB6663	6.59e-49	191.0	COG2211@1|root,COG2211@2|Bacteria,2IY9C@203682|Planctomycetes	203682|Planctomycetes	G	Major Facilitator Superfamily	-	-	-	-	-	-	-	-	-	-	-	-	MFS_1
DYD3_k127_5697835_28	1184267.A11Q_944	1.008e-38	153.0	COG2928@1|root,COG2928@2|Bacteria,1R79M@1224|Proteobacteria,42N61@68525|delta/epsilon subdivisions,2MTXS@213481|Bdellovibrionales,2WM0D@28221|Deltaproteobacteria	213481|Bdellovibrionales	S	Protein of unknown function (DUF502)	-	-	-	-	-	-	-	-	-	-	-	-	DUF502
DYD3_k127_5697835_26	1121921.KB898707_gene999	1.651e-41	160.0	COG2227@1|root,COG2227@2|Bacteria,1R9ZR@1224|Proteobacteria,1S27B@1236|Gammaproteobacteria,2PNN5@256005|Alteromonadales genera incertae sedis	1236|Gammaproteobacteria	H	Methyltransferase domain	-	-	-	-	-	-	-	-	-	-	-	-	Methyltransf_23
DYD3_k127_5697835_18	1353529.M899_3010	6.175e-69	239.0	COG2131@1|root,COG2131@2|Bacteria,1RD1P@1224|Proteobacteria,42UR6@68525|delta/epsilon subdivisions,2WR1E@28221|Deltaproteobacteria	28221|Deltaproteobacteria	F	MafB19-like deaminase	-	-	3.5.4.12	ko:K01493	ko00240,ko01100,map00240,map01100	M00429	R01663	RC00074	ko00000,ko00001,ko00002,ko01000,ko02044	-	-	-	dCMP_cyt_deam_1
DYD3_k127_5697835_7	247634.GPB2148_2719	5.22e-124	413.0	COG2195@1|root,COG2195@2|Bacteria,1MUWK@1224|Proteobacteria,1RP5F@1236|Gammaproteobacteria,1J84C@118884|unclassified Gammaproteobacteria	1236|Gammaproteobacteria	E	aminoacyl-histidine dipeptidase	pepD	GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006508,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008235,GO:0008237,GO:0008238,GO:0008270,GO:0009056,GO:0009987,GO:0016787,GO:0016805,GO:0019538,GO:0034641,GO:0043167,GO:0043169,GO:0043170,GO:0043171,GO:0043603,GO:0044237,GO:0044238,GO:0044248,GO:0044424,GO:0044444,GO:0044464,GO:0046872,GO:0046914,GO:0070011,GO:0070573,GO:0071704,GO:0140096,GO:1901564,GO:1901565,GO:1901575	-	ko:K01270	ko00480,ko01100,map00480,map01100	-	R00899,R04951	RC00096,RC00141	ko00000,ko00001,ko01000,ko01002	-	-	iPC815.YPO3230,iSBO_1134.SBO_0243	M20_dimer,Peptidase_M20
DYD3_k127_5697835_32	862908.BMS_2279	8.695e-25	107.0	2EQTX@1|root,33IDK@2|Bacteria,1NJ7Q@1224|Proteobacteria,42XE5@68525|delta/epsilon subdivisions,2MTFJ@213481|Bdellovibrionales,2WTE3@28221|Deltaproteobacteria	213481|Bdellovibrionales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	SirB
DYD3_k127_5700_7	1353529.M899_3340	5.806e-28	122.0	COG0637@1|root,COG0637@2|Bacteria,1R1VB@1224|Proteobacteria,43DBG@68525|delta/epsilon subdivisions,2WTFB@28221|Deltaproteobacteria	28221|Deltaproteobacteria	S	Haloacid dehalogenase-like hydrolase	-	-	-	-	-	-	-	-	-	-	-	-	HAD_2
DYD3_k127_5700_1	1353529.M899_0364	2.139e-112	372.0	COG4962@1|root,COG4962@2|Bacteria,1R7EN@1224|Proteobacteria,42NAK@68525|delta/epsilon subdivisions,2MSSH@213481|Bdellovibrionales,2WIYX@28221|Deltaproteobacteria	213481|Bdellovibrionales	U	PFAM Type II secretion system protein E	-	-	-	ko:K02283	-	-	-	-	ko00000,ko02035,ko02044	-	-	-	T2SSE
DYD3_k127_5700_3	745277.GRAQ_02302	9.744e-58	213.0	COG3837@1|root,COG3837@2|Bacteria,1R9WZ@1224|Proteobacteria,1RYNK@1236|Gammaproteobacteria,3FG27@34037|Rahnella	1236|Gammaproteobacteria	S	Cupin domain	-	-	-	-	-	-	-	-	-	-	-	-	Cupin_2
DYD3_k127_5700_5	273068.TTE1540	9.036e-33	140.0	COG1670@1|root,COG1670@2|Bacteria,1V2FI@1239|Firmicutes,25B0M@186801|Clostridia,42J3N@68295|Thermoanaerobacterales	186801|Clostridia	J	Acetyltransferase (GNAT) domain	-	-	2.3.1.128	ko:K03790	-	-	-	-	ko00000,ko01000,ko03009	-	-	-	Acetyltransf_3
DYD3_k127_5700_4	1353529.M899_2645	3.399e-49	203.0	COG3210@1|root,COG3420@1|root,COG3210@2|Bacteria,COG3420@2|Bacteria,1NED3@1224|Proteobacteria,42WDX@68525|delta/epsilon subdivisions,2MTVC@213481|Bdellovibrionales,2WRDH@28221|Deltaproteobacteria	213481|Bdellovibrionales	U	cell wall surface anchor family protein	-	-	-	-	-	-	-	-	-	-	-	-	Peptidase_S74
DYD3_k127_5741737_0	862908.BMS_2729	3.001e-205	647.0	COG1078@1|root,COG1078@2|Bacteria,1R5S2@1224|Proteobacteria,42Q9G@68525|delta/epsilon subdivisions,2WMIK@28221|Deltaproteobacteria	28221|Deltaproteobacteria	S	HD domain	-	-	-	ko:K06885	-	-	-	-	ko00000	-	-	-	HD
DYD3_k127_5741737_3	1242864.D187_003640	1.304e-114	396.0	COG3055@1|root,COG3055@2|Bacteria,1Q4PQ@1224|Proteobacteria,4347S@68525|delta/epsilon subdivisions,2X34Y@28221|Deltaproteobacteria,2YUAC@29|Myxococcales	28221|Deltaproteobacteria	V	Kelch motif	-	-	-	-	-	-	-	-	-	-	-	-	Kelch_1,Kelch_4,TSP_3
DYD3_k127_5741737_6	1353529.M899_2750	2.036e-80	274.0	COG1136@1|root,COG1136@2|Bacteria,1NQZZ@1224|Proteobacteria,43BN9@68525|delta/epsilon subdivisions,2X8NV@28221|Deltaproteobacteria	28221|Deltaproteobacteria	V	ABC transporter	-	-	-	-	-	-	-	-	-	-	-	-	ABC_tran
DYD3_k127_5741737_12	862908.BMS_2725	1.785e-32	139.0	COG4942@1|root,COG4942@2|Bacteria	2|Bacteria	D	peptidase	p40	-	-	ko:K21471	-	-	-	-	ko00000,ko01000,ko01002,ko01011	-	-	-	CHAP,Hydrolase_2,NLPC_P60,Peptidase_M23
DYD3_k127_5741737_1	862908.BMS_2724	6.52e-163	526.0	COG0793@1|root,COG0793@2|Bacteria,1MU39@1224|Proteobacteria,42MHD@68525|delta/epsilon subdivisions,2MSRI@213481|Bdellovibrionales,2WJKC@28221|Deltaproteobacteria	213481|Bdellovibrionales	M	Belongs to the peptidase S41A family	ctpA	-	3.4.21.102	ko:K03797	-	-	-	-	ko00000,ko01000,ko01002	-	-	-	PDZ,PDZ_2,Peptidase_S41
DYD3_k127_5741737_2	1353529.M899_2746	7.754e-121	400.0	COG1570@1|root,COG1570@2|Bacteria,1MUA4@1224|Proteobacteria,42MSB@68525|delta/epsilon subdivisions,2MSVH@213481|Bdellovibrionales,2WJI6@28221|Deltaproteobacteria	213481|Bdellovibrionales	L	Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides	xseA	-	3.1.11.6	ko:K03601	ko03430,map03430	-	-	-	ko00000,ko00001,ko01000,ko03400	-	-	-	Exonuc_VII_L,tRNA_anti_2
DYD3_k127_5741737_8	1353529.M899_0617	2.571e-55	203.0	COG0739@1|root,COG0739@2|Bacteria,1MY2X@1224|Proteobacteria,42U06@68525|delta/epsilon subdivisions,2WQXU@28221|Deltaproteobacteria	28221|Deltaproteobacteria	M	Peptidase family M23	-	-	-	-	-	-	-	-	-	-	-	-	Peptidase_M23
DYD3_k127_5741737_9	862908.BMS_2722	2.165e-43	178.0	COG4191@1|root,COG4191@2|Bacteria	2|Bacteria	T	Histidine kinase	-	-	3.1.3.3	ko:K07315	-	-	-	-	ko00000,ko01000,ko03021	-	-	-	HAMP,HATPase_c,HisKA,Response_reg,SpoIIE,dCache_1
DYD3_k127_5741737_7	391615.ABSJ01000030_gene810	7.629e-69	244.0	COG1398@1|root,COG1398@2|Bacteria,1N2MA@1224|Proteobacteria,1RM88@1236|Gammaproteobacteria,1J5NW@118884|unclassified Gammaproteobacteria	1236|Gammaproteobacteria	I	COG1398 Fatty-acid desaturase	desC	-	1.14.19.1	ko:K00507	ko01040,ko01212,ko03320,ko04152,ko04212,map01040,map01212,map03320,map04152,map04212	-	R02222	RC00917	ko00000,ko00001,ko01000,ko01004	-	-	-	FA_desaturase
DYD3_k127_5741737_4	1353529.M899_2743	3.299e-111	374.0	COG2176@1|root,COG2176@2|Bacteria,1QUVW@1224|Proteobacteria,43CB1@68525|delta/epsilon subdivisions,2X8HG@28221|Deltaproteobacteria	28221|Deltaproteobacteria	L	EXOIII	-	-	2.7.7.7	ko:K03763	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	M00260	R00375,R00376,R00377,R00378	RC02795	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	-	-	-	RNase_T
DYD3_k127_5741737_11	1340493.JNIF01000004_gene676	1.199e-33	133.0	COG0295@1|root,COG0295@2|Bacteria,3Y5A0@57723|Acidobacteria	57723|Acidobacteria	F	This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis	-	-	3.5.4.5	ko:K01489	ko00240,ko00983,ko01100,map00240,map00983,map01100	-	R01878,R02485,R08221	RC00074,RC00514	ko00000,ko00001,ko01000	-	-	-	dCMP_cyt_deam_1
DYD3_k127_5741737_5	1353529.M899_2742	1.072e-102	340.0	COG0005@1|root,COG0005@2|Bacteria,1MUWW@1224|Proteobacteria,42P3C@68525|delta/epsilon subdivisions,2MSN4@213481|Bdellovibrionales,2WJW1@28221|Deltaproteobacteria	213481|Bdellovibrionales	F	The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate	punA	-	2.4.2.1	ko:K03783	ko00230,ko00240,ko00760,ko01100,ko01110,map00230,map00240,map00760,map01100,map01110	-	R01561,R01863,R01969,R02147,R02294,R02295,R02297,R02484,R02557,R02748,R08368,R10244	RC00033,RC00063,RC00122	ko00000,ko00001,ko01000	-	-	-	PNP_UDP_1
DYD3_k127_5741737_10	1201288.M900_2089	1.096e-35	141.0	COG0213@1|root,COG0213@2|Bacteria,1MV3H@1224|Proteobacteria,42PCD@68525|delta/epsilon subdivisions,2MSPY@213481|Bdellovibrionales,2WKGQ@28221|Deltaproteobacteria	213481|Bdellovibrionales	F	The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis	pdp	-	2.4.2.2,2.4.2.4	ko:K00756,ko:K00758	ko00240,ko00983,ko01100,ko05219,map00240,map00983,map01100,map05219	-	R01570,R01876,R02296,R02484,R08222,R08230	RC00063	ko00000,ko00001,ko01000	-	-	-	Glycos_trans_3N,Glycos_transf_3,PYNP_C
DYD3_k127_5754745_19	566461.SSFG_06029	1.115e-18	91.0	2BUTG@1|root,32Q51@2|Bacteria,2ISEW@201174|Actinobacteria	201174|Actinobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_5754745_23	1201290.M902_2967	7.692e-07	59.0	COG0500@1|root,COG2226@2|Bacteria,1R9JW@1224|Proteobacteria,42M76@68525|delta/epsilon subdivisions,2WK4P@28221|Deltaproteobacteria	28221|Deltaproteobacteria	Q	Methyltransferase	-	-	-	-	-	-	-	-	-	-	-	-	Methyltransf_11,Methyltransf_31
DYD3_k127_5754745_1	1121396.KB893060_gene2868	4.244e-246	811.0	COG0841@1|root,COG0841@2|Bacteria,1MU48@1224|Proteobacteria,42MQ0@68525|delta/epsilon subdivisions,2WJ2A@28221|Deltaproteobacteria,2MN6Y@213118|Desulfobacterales	28221|Deltaproteobacteria	V	AcrB/AcrD/AcrF family	-	-	-	-	-	-	-	-	-	-	-	-	ACR_tran
DYD3_k127_5754745_15	710685.MycrhN_0953	1.774e-29	126.0	COG1309@1|root,COG1309@2|Bacteria,2IMN5@201174|Actinobacteria,2391H@1762|Mycobacteriaceae	201174|Actinobacteria	K	WHG domain	-	-	-	-	-	-	-	-	-	-	-	-	TetR_N,WHG
DYD3_k127_5754745_6	484770.UFO1_0658	6.331e-81	278.0	COG3967@1|root,COG3967@2|Bacteria,1V522@1239|Firmicutes	1239|Firmicutes	M	belongs to the short-chain dehydrogenases reductases	dltE	-	-	ko:K14189	-	-	-	-	ko00000,ko01000	-	-	-	adh_short
DYD3_k127_5754745_5	1300143.CCAV010000001_gene1240	3.192e-93	310.0	COG0778@1|root,COG0778@2|Bacteria,4NF5J@976|Bacteroidetes,1HXM1@117743|Flavobacteriia,3ZQ4K@59732|Chryseobacterium	976|Bacteroidetes	C	Nitroreductase	-	-	-	-	-	-	-	-	-	-	-	-	Nitroreductase
DYD3_k127_5754745_2	1353529.M899_1002	1.803e-243	758.0	COG1966@1|root,COG1966@2|Bacteria,1MWF9@1224|Proteobacteria,42NBI@68525|delta/epsilon subdivisions,2WKNF@28221|Deltaproteobacteria	28221|Deltaproteobacteria	T	PFAM Carbon starvation protein CstA	-	-	-	-	-	-	-	-	-	-	-	-	CstA,CstA_5TM
DYD3_k127_5754745_4	1123234.AUKI01000011_gene1304	3.22e-98	332.0	COG0513@1|root,COG0513@2|Bacteria,4NEVI@976|Bacteroidetes,1HXIJ@117743|Flavobacteriia	976|Bacteroidetes	L	Belongs to the DEAD box helicase family	rhlE	-	3.6.4.13	ko:K11927	ko03018,map03018	-	-	-	ko00000,ko00001,ko01000,ko03019	-	-	-	DEAD,Helicase_C
DYD3_k127_5754745_8	543728.Vapar_3938	3.805e-43	164.0	COG1309@1|root,COG1309@2|Bacteria,1MWKF@1224|Proteobacteria,2VTQ1@28216|Betaproteobacteria	28216|Betaproteobacteria	K	PFAM regulatory protein TetR	-	-	-	-	-	-	-	-	-	-	-	-	TetR_C_6,TetR_N
DYD3_k127_5754745_3	1114970.PSF113_3052	4.352e-122	400.0	COG0451@1|root,COG0451@2|Bacteria,1MW32@1224|Proteobacteria,1SYQK@1236|Gammaproteobacteria,1YNMH@136843|Pseudomonas fluorescens group	1236|Gammaproteobacteria	M	NmrA-like family	-	-	1.1.1.219	ko:K00091	-	-	-	-	ko00000,ko01000	-	-	-	Epimerase
DYD3_k127_5754745_20	1122176.KB903553_gene3619	4.905e-13	70.0	COG0477@1|root,COG2814@2|Bacteria,4NEN9@976|Bacteroidetes,1IR8C@117747|Sphingobacteriia	976|Bacteroidetes	EGP	Major Facilitator Superfamily	-	-	-	-	-	-	-	-	-	-	-	-	MFS_1
DYD3_k127_5754745_9	1415779.JOMH01000001_gene3235	6.654e-42	155.0	COG0477@1|root,COG2814@2|Bacteria,1R2KY@1224|Proteobacteria,1RZ6A@1236|Gammaproteobacteria	1236|Gammaproteobacteria	EGP	Pfam Major Facilitator Superfamily	-	-	-	-	-	-	-	-	-	-	-	-	MFS_1
DYD3_k127_5754745_11	1415779.JOMH01000001_gene3235	8.171e-40	149.0	COG0477@1|root,COG2814@2|Bacteria,1R2KY@1224|Proteobacteria,1RZ6A@1236|Gammaproteobacteria	1236|Gammaproteobacteria	EGP	Pfam Major Facilitator Superfamily	-	-	-	-	-	-	-	-	-	-	-	-	MFS_1
DYD3_k127_5754745_7	1201288.M900_0957	9.13e-55	195.0	COG2824@1|root,COG2824@2|Bacteria,1RGUU@1224|Proteobacteria,42TNM@68525|delta/epsilon subdivisions,2MT6K@213481|Bdellovibrionales,2WQB4@28221|Deltaproteobacteria	213481|Bdellovibrionales	P	Alkylphosphonate utilization operon protein PhnA	phnA	-	-	ko:K06193	ko01120,map01120	-	-	-	ko00000	-	-	-	PhnA,PhnA_Zn_Ribbon
DYD3_k127_5754745_18	1476973.JMMB01000007_gene1046	6.315e-20	94.0	COG0735@1|root,COG0735@2|Bacteria,1V7F0@1239|Firmicutes,24JQE@186801|Clostridia,25RF8@186804|Peptostreptococcaceae	186801|Clostridia	P	Belongs to the Fur family	fur	-	-	ko:K03711	-	-	-	-	ko00000,ko03000	-	-	-	FUR
DYD3_k127_5754745_10	714943.Mucpa_4889	5.825e-40	157.0	COG0220@1|root,COG0220@2|Bacteria,4PM18@976|Bacteroidetes,1ITBB@117747|Sphingobacteriia	976|Bacteroidetes	J	SPTR Ribosomal protein L11 methyltransferase	-	-	-	-	-	-	-	-	-	-	-	-	Methyltransf_31
DYD3_k127_5754745_22	317655.Sala_0084	4.783e-08	61.0	COG1309@1|root,COG1309@2|Bacteria,1RC4X@1224|Proteobacteria,2U5UN@28211|Alphaproteobacteria,2K67I@204457|Sphingomonadales	204457|Sphingomonadales	K	Transcriptional regulator	-	-	-	ko:K19335	-	-	-	-	ko00000,ko03000	-	-	-	TetR_N
DYD3_k127_5754745_17	42565.FP66_09110	1.837e-27	123.0	COG1418@1|root,COG1418@2|Bacteria,1MV0J@1224|Proteobacteria,1S2SI@1236|Gammaproteobacteria	1236|Gammaproteobacteria	S	Metal dependent phosphohydrolases with conserved 'HD' motif.	-	-	-	-	-	-	-	-	-	-	-	-	HD
DYD3_k127_5754745_16	1278309.KB907101_gene709	5.513e-29	118.0	2CBEP@1|root,32RT7@2|Bacteria,1MZXD@1224|Proteobacteria,1SCAX@1236|Gammaproteobacteria,1XM50@135619|Oceanospirillales	135619|Oceanospirillales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_5754745_14	667014.Thein_1376	5.14e-35	144.0	COG0101@1|root,COG0101@2|Bacteria,2GH76@200940|Thermodesulfobacteria	200940|Thermodesulfobacteria	J	Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs	truA	-	5.4.99.12	ko:K06173	-	-	-	-	ko00000,ko01000,ko03016	-	-	-	PseudoU_synth_1
DYD3_k127_5754745_0	794903.OPIT5_05950	1.292e-251	793.0	COG0343@1|root,COG0343@2|Bacteria,46U5K@74201|Verrucomicrobia,3K919@414999|Opitutae	414999|Opitutae	J	S-adenosyl-L-methionine-dependent methyltransferase	-	-	2.4.2.29	ko:K00773	-	-	R03789,R10209	RC00063	ko00000,ko01000,ko03016	-	-	-	Methyltransf_30,TGT
DYD3_k127_5754745_24	1096546.WYO_0783	0.0002365	53.0	COG1404@1|root,COG2152@1|root,COG1404@2|Bacteria,COG2152@2|Bacteria,1PKWV@1224|Proteobacteria,2UZIQ@28211|Alphaproteobacteria,1JUGS@119045|Methylobacteriaceae	28211|Alphaproteobacteria	GO	Converts 4-O-beta-D-mannopyranosyl-D-glucopyranose (Man- Glc) to mannose 1-phosphate (Man1P) and glucose	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_5754745_21	330214.NIDE2929	8.309e-09	64.0	COG0465@1|root,COG0465@2|Bacteria,3J0AG@40117|Nitrospirae	2|Bacteria	D	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins	ftsH	-	3.4.21.53	ko:K03798,ko:K04076,ko:K13525,ko:K17681	ko04141,ko05134,map04141,map05134	M00400,M00403,M00742	-	-	ko00000,ko00001,ko00002,ko01000,ko01002,ko03019,ko03029,ko03110,ko04131,ko04147	3.A.16.1	-	-	AAA,FtsH_ext,Peptidase_M41
DYD3_k127_5754745_12	1280952.HJA_08664	3.079e-36	149.0	2F57W@1|root,33XUC@2|Bacteria,1NEQ9@1224|Proteobacteria,2US91@28211|Alphaproteobacteria	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_5838332_5	583355.Caka_2468	8.545e-60	210.0	COG2947@1|root,COG2947@2|Bacteria,46VWG@74201|Verrucomicrobia,3K8C4@414999|Opitutae	414999|Opitutae	S	EVE domain	-	-	-	-	-	-	-	-	-	-	-	-	EVE
DYD3_k127_5838332_2	862908.BMS_2471	2.91e-109	369.0	COG2866@1|root,COG2866@2|Bacteria	2|Bacteria	E	metallocarboxypeptidase activity	-	-	3.4.17.22	ko:K07752	-	-	-	-	ko00000,ko01000,ko01002	-	-	-	Peptidase_M14
DYD3_k127_5838332_3	1353529.M899_2089	4.046e-82	286.0	COG1520@1|root,COG1520@2|Bacteria,1MXIJ@1224|Proteobacteria,42V3F@68525|delta/epsilon subdivisions,2MTKU@213481|Bdellovibrionales,2WR8K@28221|Deltaproteobacteria	213481|Bdellovibrionales	S	PQQ-like domain	yfgL	-	-	ko:K17713	-	-	-	-	ko00000,ko02000	1.B.33.1	-	-	PQQ_2,PQQ_3
DYD3_k127_5838332_8	1353529.M899_2090	1.623e-26	117.0	COG2976@1|root,COG2976@2|Bacteria	2|Bacteria	CO	Protein conserved in bacteria	yfgM	GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0009897,GO:0009986,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0031233,GO:0044425,GO:0044459,GO:0044464,GO:0071575,GO:0071944,GO:0098552	-	-	-	-	-	-	-	-	-	-	TPR_21
DYD3_k127_5838332_6	862908.BMS_2011	1.189e-36	143.0	2C0UI@1|root,2ZRX4@2|Bacteria,1P9JU@1224|Proteobacteria,433DS@68525|delta/epsilon subdivisions,2MTEW@213481|Bdellovibrionales,2WXZT@28221|Deltaproteobacteria	213481|Bdellovibrionales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_5838332_4	1353529.M899_2092	1.078e-78	270.0	2BW8Y@1|root,2ZJXW@2|Bacteria,1P7ZW@1224|Proteobacteria,4337N@68525|delta/epsilon subdivisions,2MT8R@213481|Bdellovibrionales,2WXNE@28221|Deltaproteobacteria	213481|Bdellovibrionales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	OMP_b-brl
DYD3_k127_5838332_0	1353529.M899_2096	9.304e-206	657.0	COG1160@1|root,COG1160@2|Bacteria,1MU9S@1224|Proteobacteria,42M3N@68525|delta/epsilon subdivisions,2MT0M@213481|Bdellovibrionales,2WISS@28221|Deltaproteobacteria	213481|Bdellovibrionales	S	GTPase that plays an essential role in the late steps of ribosome biogenesis	der	-	-	ko:K03977	-	-	-	-	ko00000,ko03009	-	-	-	KH_dom-like,MMR_HSR1
DYD3_k127_5838332_1	1353529.M899_2097	1.147e-133	432.0	COG1159@1|root,COG1159@2|Bacteria,1MUKT@1224|Proteobacteria,42MUR@68525|delta/epsilon subdivisions,2MT66@213481|Bdellovibrionales,2WJC8@28221|Deltaproteobacteria	213481|Bdellovibrionales	S	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism	era	-	-	ko:K03595	-	-	-	-	ko00000,ko03009,ko03029	-	-	-	KH_2,MMR_HSR1
DYD3_k127_5838332_7	862908.BMS_2016	1.907e-35	142.0	COG0571@1|root,COG0571@2|Bacteria,1MUQ6@1224|Proteobacteria,42MIP@68525|delta/epsilon subdivisions,2MT71@213481|Bdellovibrionales,2WNDB@28221|Deltaproteobacteria	213481|Bdellovibrionales	J	Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism	rnc	GO:0003674,GO:0003676,GO:0003723,GO:0003725,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004525,GO:0004540,GO:0005488,GO:0006139,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0032296,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0097159,GO:0140098,GO:1901360,GO:1901363	3.1.26.3	ko:K03685	ko03008,ko05205,map03008,map05205	-	-	-	ko00000,ko00001,ko01000,ko03009,ko03019,ko03036	-	-	-	Ribonucleas_3_3,dsrm
DYD3_k127_5875420_0	1353529.M899_2910	2.074e-171	556.0	COG0488@1|root,COG0488@2|Bacteria,1MU37@1224|Proteobacteria,42MMK@68525|delta/epsilon subdivisions,2MSN7@213481|Bdellovibrionales,2WJC1@28221|Deltaproteobacteria	213481|Bdellovibrionales	S	PFAM ABC transporter related	uup	-	-	ko:K15738	-	-	-	-	ko00000,ko02000	3.A.1.120.6	-	-	ABC_tran,ABC_tran_CTD,ABC_tran_Xtn
DYD3_k127_5875420_2	657309.BXY_02470	0.0002382	50.0	294ZR@1|root,2ZSCK@2|Bacteria,4NNYY@976|Bacteroidetes,2FP6D@200643|Bacteroidia,4AMAA@815|Bacteroidaceae	976|Bacteroidetes	S	COG NOG27188 non supervised orthologous group	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_5875420_1	1358423.N180_17020	3.21e-19	93.0	COG1409@1|root,COG1409@2|Bacteria,4NGXX@976|Bacteroidetes,1IRVX@117747|Sphingobacteriia	976|Bacteroidetes	S	Calcineurin-like phosphoesterase	-	-	-	-	-	-	-	-	-	-	-	-	Metallophos
DYD3_k127_591690_13	1319815.HMPREF0202_01951	2.405e-07	55.0	COG2933@1|root,COG2933@2|Bacteria	2|Bacteria	J	rRNA processing	rlmM	GO:0000154,GO:0000451,GO:0000453,GO:0001510,GO:0003674,GO:0003824,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008171,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016434,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0070677,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360	2.1.1.186	ko:K06968	-	-	-	-	ko00000,ko01000,ko03009	-	-	-	FtsJ
DYD3_k127_591690_8	1004785.AMBLS11_16220	3.011e-37	147.0	COG0727@1|root,COG0727@2|Bacteria,1NAJX@1224|Proteobacteria,1SMUG@1236|Gammaproteobacteria,46ATU@72275|Alteromonadaceae	1236|Gammaproteobacteria	S	Fe-S-cluster oxidoreductase	-	-	-	-	-	-	-	-	-	-	-	-	CxxCxxCC
DYD3_k127_591690_4	264462.Bd1244	1.468e-62	225.0	COG2356@1|root,COG2356@2|Bacteria,1MXQM@1224|Proteobacteria,42P2N@68525|delta/epsilon subdivisions,2MTVM@213481|Bdellovibrionales,2WT6E@28221|Deltaproteobacteria	213481|Bdellovibrionales	L	Endonuclease I	-	-	-	-	-	-	-	-	-	-	-	-	Endonuclease_1
DYD3_k127_591690_0	862908.BMS_1983	1.682e-111	364.0	COG1788@1|root,COG1788@2|Bacteria,1MVEI@1224|Proteobacteria,42QMC@68525|delta/epsilon subdivisions,2MSR4@213481|Bdellovibrionales,2WMDH@28221|Deltaproteobacteria	213481|Bdellovibrionales	I	3-oxoacid CoA-transferase	scoA	-	2.8.3.5	ko:K01028	ko00072,ko00280,ko00650,map00072,map00280,map00650	-	R00410	RC00014	ko00000,ko00001,ko01000	-	-	-	CoA_trans
DYD3_k127_591690_1	862908.BMS_1982	2.603e-111	362.0	COG2057@1|root,COG2057@2|Bacteria,1RA4V@1224|Proteobacteria,42PZY@68525|delta/epsilon subdivisions,2MSU1@213481|Bdellovibrionales,2WJ9V@28221|Deltaproteobacteria	213481|Bdellovibrionales	I	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit	-	-	2.8.3.5,2.8.3.8,2.8.3.9	ko:K01029,ko:K01035	ko00072,ko00280,ko00310,ko00627,ko00640,ko00650,ko01100,ko01120,ko02020,map00072,map00280,map00310,map00627,map00640,map00650,map01100,map01120,map02020	-	R00410,R01179,R01359,R01365,R07832	RC00012,RC00014	ko00000,ko00001,ko01000	-	-	-	CoA_trans
DYD3_k127_591690_12	264462.Bd0655	9.974e-23	104.0	2B2RX@1|root,31VC3@2|Bacteria,1QT94@1224|Proteobacteria,437TY@68525|delta/epsilon subdivisions,2MUNF@213481|Bdellovibrionales,2X33E@28221|Deltaproteobacteria	213481|Bdellovibrionales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_591690_3	1201290.M902_0935	1.623e-70	252.0	COG0263@1|root,COG0263@2|Bacteria,1MUBG@1224|Proteobacteria,42NEA@68525|delta/epsilon subdivisions,2MU8J@213481|Bdellovibrionales,2WIVS@28221|Deltaproteobacteria	213481|Bdellovibrionales	E	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate	proB	GO:0003674,GO:0003824,GO:0004349,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006560,GO:0006561,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016774,GO:0018130,GO:0019202,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607	2.7.2.11	ko:K00931	ko00330,ko00332,ko01100,ko01130,ko01230,map00330,map00332,map01100,map01130,map01230	M00015	R00239	RC00002,RC00043	ko00000,ko00001,ko00002,ko01000	-	-	iAF987.Gmet_3198	AA_kinase,PUA
DYD3_k127_591690_2	246194.CHY_0383	1.849e-110	371.0	COG0014@1|root,COG0014@2|Bacteria,1TQ9V@1239|Firmicutes,248NX@186801|Clostridia,42FGQ@68295|Thermoanaerobacterales	186801|Clostridia	E	Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate	proA	-	1.2.1.41	ko:K00147	ko00330,ko00332,ko01100,ko01110,ko01130,ko01230,map00330,map00332,map01100,map01110,map01130,map01230	M00015	R03313	RC00684	ko00000,ko00001,ko00002,ko01000	-	-	-	Aldedh
DYD3_k127_591690_11	1184267.A11Q_876	5.161e-27	116.0	COG1666@1|root,COG1666@2|Bacteria,1RDTF@1224|Proteobacteria,42SVZ@68525|delta/epsilon subdivisions,2MT6A@213481|Bdellovibrionales,2WN8K@28221|Deltaproteobacteria	213481|Bdellovibrionales	S	Belongs to the UPF0234 family	yajQ	-	-	ko:K09767	-	-	-	-	ko00000	-	-	-	DUF520
DYD3_k127_591690_10	1353529.M899_1940	9.395e-34	134.0	COG1610@1|root,COG1610@2|Bacteria,1RGZS@1224|Proteobacteria,42SH8@68525|delta/epsilon subdivisions,2MTEP@213481|Bdellovibrionales,2WQ3S@28221|Deltaproteobacteria	213481|Bdellovibrionales	S	Yqey-like protein	yqeY	-	-	ko:K09117	-	-	-	-	ko00000	-	-	-	YqeY
DYD3_k127_591690_5	1353529.M899_2634	2.721e-59	212.0	COG0024@1|root,COG0024@2|Bacteria,1R1I2@1224|Proteobacteria,430H5@68525|delta/epsilon subdivisions,2MU17@213481|Bdellovibrionales,2WW0W@28221|Deltaproteobacteria	213481|Bdellovibrionales	J	Metallopeptidase family M24	-	-	-	-	-	-	-	-	-	-	-	-	Peptidase_M24
DYD3_k127_591690_6	1201288.M900_1162	6.033e-54	192.0	COG1683@1|root,COG1683@2|Bacteria,1RHER@1224|Proteobacteria,42TQ2@68525|delta/epsilon subdivisions,2MTYE@213481|Bdellovibrionales,2WQ1D@28221|Deltaproteobacteria	213481|Bdellovibrionales	S	Protein of unknown function (DUF523)	-	-	-	-	-	-	-	-	-	-	-	-	DUF523
DYD3_k127_591690_14	1353529.M899_0653	0.0003711	53.0	COG0501@1|root,COG0501@2|Bacteria,1NVP0@1224|Proteobacteria,42ZZ7@68525|delta/epsilon subdivisions,2MU08@213481|Bdellovibrionales,2WV89@28221|Deltaproteobacteria	213481|Bdellovibrionales	O	Belongs to the peptidase M48B family	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_591690_9	479435.Kfla_1558	1.549e-35	152.0	COG3591@1|root,COG3591@2|Bacteria	2|Bacteria	E	Belongs to the peptidase S1B family	-	-	-	-	-	-	-	-	-	-	-	-	Trypsin_2
DYD3_k127_592897_4	862908.BMS_2874	4.889e-55	199.0	COG0484@1|root,COG1426@1|root,COG0484@2|Bacteria,COG1426@2|Bacteria,1NCYU@1224|Proteobacteria,42WS1@68525|delta/epsilon subdivisions,2MT9U@213481|Bdellovibrionales,2WSDX@28221|Deltaproteobacteria	213481|Bdellovibrionales	O	Helix-turn-helix domain	-	-	-	-	-	-	-	-	-	-	-	-	DnaJ,HTH_25
DYD3_k127_592897_1	862908.BMS_2875	3.71e-121	396.0	COG0564@1|root,COG0564@2|Bacteria,1MUBN@1224|Proteobacteria,42MBA@68525|delta/epsilon subdivisions,2MT1G@213481|Bdellovibrionales,2WKX9@28221|Deltaproteobacteria	213481|Bdellovibrionales	J	Responsible for synthesis of pseudouridine from uracil	rluD	-	5.4.99.23	ko:K06180	-	-	-	-	ko00000,ko01000,ko03009	-	-	-	PseudoU_synth_2,S4
DYD3_k127_592897_5	1201288.M900_2270	9.15e-36	143.0	COG1496@1|root,COG1496@2|Bacteria,1Q5SP@1224|Proteobacteria,42TIV@68525|delta/epsilon subdivisions,2MTFC@213481|Bdellovibrionales,2X5Q4@28221|Deltaproteobacteria	213481|Bdellovibrionales	S	Multi-copper polyphenol oxidoreductase laccase	-	-	-	-	-	-	-	-	-	-	-	-	Cu-oxidase_4
DYD3_k127_592897_2	1353529.M899_1235	7.251e-105	353.0	COG1651@1|root,COG4243@1|root,COG1651@2|Bacteria,COG4243@2|Bacteria	2|Bacteria	S	quinone binding	-	-	-	-	-	-	-	-	-	-	-	-	Thioredoxin_4,VKOR
DYD3_k127_592897_3	1201288.M900_2273	2.202e-94	315.0	COG0084@1|root,COG0084@2|Bacteria,1MUC0@1224|Proteobacteria,42MMS@68525|delta/epsilon subdivisions,2MSYS@213481|Bdellovibrionales,2WMUI@28221|Deltaproteobacteria	213481|Bdellovibrionales	L	TIGRFAM hydrolase, TatD family	tatD	-	-	ko:K03424	-	-	-	-	ko00000,ko01000	-	-	-	Fer4_14,Radical_SAM,TatD_DNase
DYD3_k127_5946328_8	1353529.M899_0072	3.702e-42	162.0	COG0770@1|root,COG0770@2|Bacteria,1QTSF@1224|Proteobacteria,42MXF@68525|delta/epsilon subdivisions,2MSZD@213481|Bdellovibrionales,2WIJZ@28221|Deltaproteobacteria	213481|Bdellovibrionales	M	Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein	murF	-	6.3.2.10	ko:K01929	ko00300,ko00550,ko01100,ko01502,map00300,map00550,map01100,map01502	-	R04573,R04617	RC00064,RC00141	ko00000,ko00001,ko01000,ko01011	-	-	-	Mur_ligase,Mur_ligase_C,Mur_ligase_M
DYD3_k127_5946328_4	1353529.M899_0071	1.01e-96	332.0	COG0769@1|root,COG0769@2|Bacteria,1MU6P@1224|Proteobacteria,42NKY@68525|delta/epsilon subdivisions,2MSZS@213481|Bdellovibrionales,2WJJG@28221|Deltaproteobacteria	213481|Bdellovibrionales	M	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan	murE	GO:0000270,GO:0003674,GO:0003824,GO:0006022,GO:0006023,GO:0006024,GO:0006807,GO:0008150,GO:0008152,GO:0008765,GO:0009058,GO:0009059,GO:0009252,GO:0009273,GO:0009987,GO:0016874,GO:0016879,GO:0016881,GO:0030203,GO:0034645,GO:0042546,GO:0043170,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044249,GO:0044260,GO:0070589,GO:0071554,GO:0071704,GO:0071840,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576	6.3.2.13	ko:K01928	ko00300,ko00550,map00300,map00550	-	R02788	RC00064,RC00090	ko00000,ko00001,ko01000,ko01011	-	-	-	Mur_ligase,Mur_ligase_C,Mur_ligase_M
DYD3_k127_5946328_0	862908.BMS_0059	1.886e-206	660.0	COG0768@1|root,COG0768@2|Bacteria,1MUNY@1224|Proteobacteria,42M1T@68525|delta/epsilon subdivisions,2MSU9@213481|Bdellovibrionales,2WK0W@28221|Deltaproteobacteria	213481|Bdellovibrionales	M	Penicillin-binding protein, dimerisation domain	ftsI	-	3.4.16.4	ko:K03587	ko00550,ko01501,map00550,map01501	-	-	-	ko00000,ko00001,ko01000,ko01011,ko03036	-	-	-	PASTA,PBP_dimer,Transpeptidase
DYD3_k127_5946328_5	1353529.M899_0068	1.697e-88	302.0	COG0275@1|root,COG0275@2|Bacteria,1MUT4@1224|Proteobacteria,42N5Q@68525|delta/epsilon subdivisions,2MSYV@213481|Bdellovibrionales,2WJ8J@28221|Deltaproteobacteria	213481|Bdellovibrionales	J	Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA	rsmH	GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016434,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0070475,GO:0071424,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360	2.1.1.199	ko:K03438	-	-	-	-	ko00000,ko01000,ko03009	-	-	-	Methyltransf_5
DYD3_k127_5946328_2	1201288.M900_0132	2.152e-115	377.0	COG0005@1|root,COG0005@2|Bacteria,1MUWW@1224|Proteobacteria,42P5B@68525|delta/epsilon subdivisions,2MTWR@213481|Bdellovibrionales,2WM02@28221|Deltaproteobacteria	213481|Bdellovibrionales	F	Catalyzes the reversible phosphorylation of S-methyl-5'- thioadenosine (MTA) to adenine and 5-methylthioribose-1-phosphate. Involved in the breakdown of MTA, a major by-product of polyamine biosynthesis. Responsible for the first step in the methionine salvage pathway after MTA has been generated from S- adenosylmethionine. Has broad substrate specificity with 6- aminopurine nucleosides as preferred substrates	mtnP	GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0004731,GO:0006082,GO:0006139,GO:0006144,GO:0006168,GO:0006520,GO:0006555,GO:0006725,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009066,GO:0009067,GO:0009086,GO:0009112,GO:0009113,GO:0009987,GO:0016053,GO:0016740,GO:0016757,GO:0016763,GO:0017061,GO:0017144,GO:0018130,GO:0019438,GO:0019509,GO:0019752,GO:0034641,GO:0034654,GO:0042440,GO:0043094,GO:0043096,GO:0043101,GO:0043102,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0046083,GO:0046084,GO:0046112,GO:0046148,GO:0046394,GO:0046483,GO:0055086,GO:0071265,GO:0071267,GO:0071704,GO:0072521,GO:0072522,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607	2.4.2.28	ko:K00772	ko00270,ko01100,map00270,map01100	M00034	R01402	RC00063,RC02819	ko00000,ko00001,ko00002,ko01000	-	-	iAF987.Gmet_2684	PNP_UDP_1
DYD3_k127_5946328_10	1353529.M899_2149	3.354e-29	122.0	COG1734@1|root,COG1734@2|Bacteria,1RD08@1224|Proteobacteria,42RVK@68525|delta/epsilon subdivisions,2MUC7@213481|Bdellovibrionales,2WNNA@28221|Deltaproteobacteria	213481|Bdellovibrionales	K	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters	dksA	-	-	ko:K06204	ko02026,map02026	-	-	-	ko00000,ko00001,ko03000,ko03009,ko03021	-	-	-	zf-dskA_traR
DYD3_k127_5946328_3	1353529.M899_0066	2.547e-102	335.0	COG1100@1|root,COG1100@2|Bacteria,1R6NS@1224|Proteobacteria,42NIX@68525|delta/epsilon subdivisions,2MSWB@213481|Bdellovibrionales,2WJ44@28221|Deltaproteobacteria	213481|Bdellovibrionales	S	ADP-ribosylation factor family	mglA	-	-	ko:K06883	-	-	-	-	ko00000	-	-	-	Arf,Ras
DYD3_k127_5946328_6	862908.BMS_0052	1.11e-75	258.0	COG0353@1|root,COG0353@2|Bacteria,1MV9Q@1224|Proteobacteria,42QZJ@68525|delta/epsilon subdivisions,2MT3Q@213481|Bdellovibrionales,2WNCH@28221|Deltaproteobacteria	213481|Bdellovibrionales	L	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO	recR	-	-	ko:K06187	ko03440,map03440	-	-	-	ko00000,ko00001,ko03400	-	-	-	RecR,Toprim_4
DYD3_k127_5946328_9	1353529.M899_0062	1.02e-39	149.0	COG0718@1|root,COG0718@2|Bacteria,1RGZD@1224|Proteobacteria,42TGQ@68525|delta/epsilon subdivisions,2MTBM@213481|Bdellovibrionales,2WQ6R@28221|Deltaproteobacteria	213481|Bdellovibrionales	S	Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection	-	-	-	ko:K09747	-	-	-	-	ko00000	-	-	-	YbaB_DNA_bd
DYD3_k127_5946328_1	862908.BMS_0050	1.109e-158	517.0	COG2812@1|root,COG2812@2|Bacteria,1MVCK@1224|Proteobacteria,42M09@68525|delta/epsilon subdivisions,2MSS7@213481|Bdellovibrionales,2WJ1G@28221|Deltaproteobacteria	213481|Bdellovibrionales	L	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity	dnaX	-	2.7.7.7	ko:K02343	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	M00260	R00375,R00376,R00377,R00378	RC02795	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	-	-	-	DNA_pol3_delta2,DNA_pol3_gamma3
DYD3_k127_5946328_7	264462.Bd3212	4.894e-67	239.0	COG2602@1|root,COG2602@2|Bacteria,1NWXE@1224|Proteobacteria,42QWH@68525|delta/epsilon subdivisions,2WR66@28221|Deltaproteobacteria	28221|Deltaproteobacteria	M	PFAM penicillin-binding protein transpeptidase	-	-	3.5.2.6	ko:K17838	ko01501,map01501	-	R06363	RC01499	ko00000,ko00001,ko01000	-	-	-	Transpeptidase
DYD3_k127_5955621_0	1201288.M900_2248	0.0	1205.0	COG0495@1|root,COG0495@2|Bacteria,1MV47@1224|Proteobacteria,42MRQ@68525|delta/epsilon subdivisions,2MSMW@213481|Bdellovibrionales,2WJ3E@28221|Deltaproteobacteria	213481|Bdellovibrionales	J	Belongs to the class-I aminoacyl-tRNA synthetase family	leuS	-	6.1.1.4	ko:K01869	ko00970,map00970	M00359,M00360	R03657	RC00055,RC00523	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029	-	-	-	Anticodon_1,tRNA-synt_1,tRNA-synt_1_2
DYD3_k127_5955621_6	290397.Adeh_3956	2.443e-20	100.0	2A9VF@1|root,30Z3B@2|Bacteria,1PKZS@1224|Proteobacteria,435JG@68525|delta/epsilon subdivisions,2WZXJ@28221|Deltaproteobacteria,2Z0YG@29|Myxococcales	28221|Deltaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_5955621_2	264462.Bd3075	7.773e-59	215.0	COG0583@1|root,COG0583@2|Bacteria,1MVHT@1224|Proteobacteria,42UN5@68525|delta/epsilon subdivisions,2MT5D@213481|Bdellovibrionales,2WQU9@28221|Deltaproteobacteria	213481|Bdellovibrionales	K	transcriptional regulator	-	-	-	ko:K03717	-	-	-	-	ko00000,ko03000	-	-	-	HTH_1,LysR_substrate
DYD3_k127_5955621_8	1353529.M899_0410	0.000308	49.0	COG1544@1|root,COG1544@2|Bacteria	2|Bacteria	J	regulation of translation	hpf	GO:0003674,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006417,GO:0006448,GO:0008150,GO:0009889,GO:0009890,GO:0009892,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010608,GO:0010629,GO:0015935,GO:0016020,GO:0017148,GO:0019222,GO:0022626,GO:0022627,GO:0030312,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032268,GO:0032269,GO:0032991,GO:0034248,GO:0034249,GO:0043021,GO:0043022,GO:0043024,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0044877,GO:0045900,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051246,GO:0051248,GO:0060255,GO:0065007,GO:0071944,GO:0080090,GO:1990904,GO:2000112,GO:2000113	-	ko:K05808	-	-	-	-	ko00000,ko03009	-	-	-	Ribosom_S30AE_C,Ribosomal_S30AE
DYD3_k127_5955621_3	1201288.M900_2198	1.706e-56	202.0	COG0242@1|root,COG0242@2|Bacteria,1R9XK@1224|Proteobacteria,42T5R@68525|delta/epsilon subdivisions,2WX1F@28221|Deltaproteobacteria	28221|Deltaproteobacteria	J	Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions	def_2	-	3.5.1.88	ko:K01462	-	-	-	-	ko00000,ko01000	-	-	-	Pep_deformylase
DYD3_k127_5955621_1	862908.BMS_1342	1.127e-74	267.0	COG0534@1|root,COG0534@2|Bacteria,1MUAM@1224|Proteobacteria,42S4P@68525|delta/epsilon subdivisions,2MTZH@213481|Bdellovibrionales,2WNK7@28221|Deltaproteobacteria	213481|Bdellovibrionales	V	MatE	-	-	-	ko:K03327	-	-	-	-	ko00000,ko02000	2.A.66.1	-	-	MatE
DYD3_k127_5955621_4	69328.PVLB_24485	1.151e-40	158.0	COG3751@1|root,COG3751@2|Bacteria,1RD3H@1224|Proteobacteria,1S40I@1236|Gammaproteobacteria	1236|Gammaproteobacteria	O	2OG-Fe(II) oxygenase	-	-	-	ko:K07394	-	-	-	-	ko00000	-	-	-	2OG-FeII_Oxy_3
DYD3_k127_5955621_5	563038.HMPREF0851_01632	2.119e-21	99.0	COG0537@1|root,COG0537@2|Bacteria,1V7FG@1239|Firmicutes,4HIUY@91061|Bacilli	91061|Bacilli	FG	COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases	-	-	-	-	-	-	-	-	-	-	-	-	HIT
DYD3_k127_595791_10	1112209.AHVZ01000017_gene745	8.074e-43	160.0	COG0652@1|root,COG0652@2|Bacteria,1R9ZQ@1224|Proteobacteria,1S222@1236|Gammaproteobacteria,3NKAW@468|Moraxellaceae	1236|Gammaproteobacteria	G	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides	ppiB	GO:0000413,GO:0003674,GO:0003755,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016853,GO:0016859,GO:0018193,GO:0018208,GO:0019538,GO:0036211,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:0140096,GO:1901564	5.2.1.8	ko:K03768	-	-	-	-	ko00000,ko01000,ko03110	-	-	-	Pro_isomerase
DYD3_k127_595791_5	1353529.M899_0961	8.725e-53	194.0	COG1279@1|root,COG1279@2|Bacteria,1RD6B@1224|Proteobacteria,42SBK@68525|delta/epsilon subdivisions,2WQ42@28221|Deltaproteobacteria	28221|Deltaproteobacteria	S	LysE type translocator	-	-	-	ko:K06895	-	-	-	-	ko00000,ko02000	2.A.75.1	-	-	LysE
DYD3_k127_595791_15	1122185.N792_08605	1.033e-19	98.0	2AYWY@1|root,3354X@2|Bacteria,1NC5C@1224|Proteobacteria,1SNNY@1236|Gammaproteobacteria,1XAJ2@135614|Xanthomonadales	135614|Xanthomonadales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_595791_12	1128421.JAGA01000003_gene3728	5.277e-28	117.0	COG0745@1|root,COG0745@2|Bacteria	1128421.JAGA01000003_gene3728|-	T	phosphorelay signal transduction system	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_595791_9	862908.BMS_0407	3.988e-43	168.0	2F3J9@1|root,33WCU@2|Bacteria,1NWIX@1224|Proteobacteria,4306V@68525|delta/epsilon subdivisions,2MU13@213481|Bdellovibrionales,2WVIW@28221|Deltaproteobacteria	213481|Bdellovibrionales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_595791_6	1184267.A11Q_306	2.846e-50	191.0	COG1352@1|root,COG1352@2|Bacteria,1MU6W@1224|Proteobacteria,42M4H@68525|delta/epsilon subdivisions,2MTYZ@213481|Bdellovibrionales,2WJZ8@28221|Deltaproteobacteria	213481|Bdellovibrionales	NT	PFAM MCP methyltransferase, CheR-type	-	-	2.1.1.80	ko:K00575	ko02020,ko02030,map02020,map02030	-	-	-	ko00000,ko00001,ko01000,ko02035	-	-	-	CheR,CheR_N
DYD3_k127_595791_3	1184267.A11Q_308	2.292e-92	315.0	COG2201@1|root,COG2201@2|Bacteria,1MWCN@1224|Proteobacteria,42M27@68525|delta/epsilon subdivisions,2X5MY@28221|Deltaproteobacteria	28221|Deltaproteobacteria	NT	catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR	-	-	3.1.1.61,3.5.1.44	ko:K03412	ko02020,ko02030,map02020,map02030	M00506	-	-	ko00000,ko00001,ko00002,ko01000,ko02022,ko02035	-	-	-	CheB_methylest,Response_reg
DYD3_k127_595791_1	796620.VIBC2010_10572	5.145e-175	570.0	COG0840@1|root,COG2202@1|root,COG0840@2|Bacteria,COG2202@2|Bacteria,1MU9B@1224|Proteobacteria,1RMH0@1236|Gammaproteobacteria,1XWMA@135623|Vibrionales	135623|Vibrionales	T	PAS fold	-	-	-	ko:K03406	ko02020,ko02030,map02020,map02030	-	-	-	ko00000,ko00001,ko02035	-	-	-	MCPsignal,PAS_3,PAS_4
DYD3_k127_595791_11	1184267.A11Q_310	1.733e-34	138.0	COG0835@1|root,COG0835@2|Bacteria,1QE8X@1224|Proteobacteria,439YZ@68525|delta/epsilon subdivisions,2MU8Y@213481|Bdellovibrionales,2X9PK@28221|Deltaproteobacteria	213481|Bdellovibrionales	NT	Two component signalling adaptor domain	-	-	-	ko:K03408	ko02020,ko02030,map02020,map02030	-	-	-	ko00000,ko00001,ko02035	-	-	-	CheW
DYD3_k127_595791_0	1184267.A11Q_311	2.359e-255	818.0	COG0643@1|root,COG0643@2|Bacteria,1MUAG@1224|Proteobacteria,42M6Q@68525|delta/epsilon subdivisions,2MTJ3@213481|Bdellovibrionales,2WJ5U@28221|Deltaproteobacteria	213481|Bdellovibrionales	T	Signal transducing histidine kinase homodimeric	-	-	2.7.13.3	ko:K03407	ko02020,ko02030,map02020,map02030	M00506	-	-	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022,ko02035	-	-	-	CheW,H-kinase_dim,HATPase_c,Hpt,Response_reg
DYD3_k127_595791_21	1122137.AQXF01000004_gene1638	1.108e-14	82.0	COG5592@1|root,COG5592@2|Bacteria,1RGUY@1224|Proteobacteria,2UD7B@28211|Alphaproteobacteria	28211|Alphaproteobacteria	S	Hemerythrin	-	-	-	-	-	-	-	-	-	-	-	-	Hemerythrin
DYD3_k127_595791_4	1095769.CAHF01000011_gene2736	3.937e-53	194.0	COG0431@1|root,COG0431@2|Bacteria,1RAFI@1224|Proteobacteria,2VKQS@28216|Betaproteobacteria,4744A@75682|Oxalobacteraceae	28216|Betaproteobacteria	S	NADPH-dependent FMN reductase	azr	-	-	ko:K19784	-	-	-	-	ko00000	-	-	-	FMN_red
DYD3_k127_595791_23	690850.Desaf_0943	7.907e-08	61.0	2AYWY@1|root,3354X@2|Bacteria,1NC5C@1224|Proteobacteria	1224|Proteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_595791_17	935557.ATYB01000009_gene798	3.965e-19	94.0	COG2823@1|root,COG2823@2|Bacteria,1N1R4@1224|Proteobacteria,2UDII@28211|Alphaproteobacteria	28211|Alphaproteobacteria	S	periplasmic or secreted lipoprotein	-	-	-	-	-	-	-	-	-	-	-	-	BON
DYD3_k127_595791_19	234267.Acid_7191	5.727e-19	94.0	COG2823@1|root,COG2823@2|Bacteria,3Y8DF@57723|Acidobacteria	57723|Acidobacteria	S	BON domain	-	-	-	-	-	-	-	-	-	-	-	-	BON
DYD3_k127_595791_18	234267.Acid_7191	5.111e-19	93.0	COG2823@1|root,COG2823@2|Bacteria,3Y8DF@57723|Acidobacteria	57723|Acidobacteria	S	BON domain	-	-	-	-	-	-	-	-	-	-	-	-	BON
DYD3_k127_595791_16	234267.Acid_7191	1.59e-19	96.0	COG2823@1|root,COG2823@2|Bacteria,3Y8DF@57723|Acidobacteria	57723|Acidobacteria	S	BON domain	-	-	-	-	-	-	-	-	-	-	-	-	BON
DYD3_k127_595791_20	1192034.CAP_7827	4.139e-15	81.0	COG0745@1|root,COG0745@2|Bacteria,1NBDV@1224|Proteobacteria,42UVC@68525|delta/epsilon subdivisions,2WQ45@28221|Deltaproteobacteria,2Z0Z9@29|Myxococcales	28221|Deltaproteobacteria	T	cheY-homologous receiver domain	-	-	-	-	-	-	-	-	-	-	-	-	Response_reg
DYD3_k127_595791_22	748671.LCRIS_01222	3.661e-12	77.0	2AYWY@1|root,3354X@2|Bacteria,1VUSY@1239|Firmicutes,4HVEY@91061|Bacilli,3FC0S@33958|Lactobacillaceae	91061|Bacilli	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_595791_13	862908.BMS_0480	1.573e-26	113.0	2EAUB@1|root,334VZ@2|Bacteria	2|Bacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_595791_8	226186.BT_4462	1.489e-43	166.0	COG0204@1|root,COG0204@2|Bacteria,4PD5H@976|Bacteroidetes,2FPX0@200643|Bacteroidia,4AQEN@815|Bacteroidaceae	976|Bacteroidetes	I	Acyl-transferase	-	-	-	-	-	-	-	-	-	-	-	-	Acyltransferase
DYD3_k127_595791_2	226186.BT_4463	4.361e-97	327.0	COG4589@1|root,COG4589@2|Bacteria,4NRIQ@976|Bacteroidetes,2FR5X@200643|Bacteroidia,4AM93@815|Bacteroidaceae	976|Bacteroidetes	M	Belongs to the CDS family	-	-	2.7.7.41	ko:K00981	ko00564,ko01100,ko01110,ko04070,map00564,map01100,map01110,map04070	M00093	R01799	RC00002	ko00000,ko00001,ko00002,ko01000	-	-	-	CTP_transf_1
DYD3_k127_595791_7	862908.BMS_0477	2.048e-45	173.0	COG0558@1|root,COG0558@2|Bacteria,1RHFC@1224|Proteobacteria,43B34@68525|delta/epsilon subdivisions	1224|Proteobacteria	I	CDP-alcohol phosphatidyltransferase	pgsAb	-	-	-	-	-	-	-	-	-	-	-	CDP-OH_P_transf
DYD3_k127_595791_24	1499967.BAYZ01000190_gene3859	0.0003075	53.0	COG3227@1|root,COG4447@1|root,COG3227@2|Bacteria,COG4447@2|Bacteria	2|Bacteria	S	cellulose binding	-	-	2.7.11.1,3.4.24.25	ko:K08604,ko:K12132	ko05110,ko05111,map05110,map05111	-	-	-	ko00000,ko00001,ko01000,ko01001,ko01002	-	-	-	ChW,Cu_amine_oxidN1,F5_F8_type_C,Peptidase_M4,Peptidase_M4_C
DYD3_k127_595791_14	1163409.UUA_16248	5.944e-20	100.0	2AYWY@1|root,3354X@2|Bacteria,1NC5C@1224|Proteobacteria,1SNNY@1236|Gammaproteobacteria,1XAJ2@135614|Xanthomonadales	135614|Xanthomonadales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_5981543_11	1121904.ARBP01000002_gene6705	7.763e-120	387.0	COG1086@1|root,COG1086@2|Bacteria,4NGN2@976|Bacteroidetes,47MCI@768503|Cytophagia	976|Bacteroidetes	M	Polysaccharide biosynthesis protein	pseB	-	4.2.1.115	ko:K15894	ko00520,map00520	-	R09697	RC02609	ko00000,ko00001,ko01000	-	-	-	Polysacc_synt_2
DYD3_k127_5981543_25	537972.ABQU01000007_gene127	2.273e-27	115.0	COG0677@1|root,COG0677@2|Bacteria,1MUC6@1224|Proteobacteria,42M4F@68525|delta/epsilon subdivisions,2YMAG@29547|Epsilonproteobacteria	29547|Epsilonproteobacteria	M	Belongs to the UDP-glucose GDP-mannose dehydrogenase family	-	-	-	ko:K02474	ko00520,map00520	-	R06894	RC00291	ko00000,ko00001,ko01000,ko01005	-	-	-	UDPG_MGDP_dh,UDPG_MGDP_dh_C,UDPG_MGDP_dh_N
DYD3_k127_5981543_10	1123326.JFBL01000004_gene2092	8.85e-122	395.0	COG0677@1|root,COG0677@2|Bacteria,1MUC6@1224|Proteobacteria,42M4F@68525|delta/epsilon subdivisions,2YMAG@29547|Epsilonproteobacteria	29547|Epsilonproteobacteria	M	Belongs to the UDP-glucose GDP-mannose dehydrogenase family	-	-	-	ko:K02474	ko00520,map00520	-	R06894	RC00291	ko00000,ko00001,ko01000,ko01005	-	-	-	UDPG_MGDP_dh,UDPG_MGDP_dh_C,UDPG_MGDP_dh_N
DYD3_k127_5981543_19	391593.RCCS2_10610	6.691e-46	188.0	COG1835@1|root,COG1835@2|Bacteria,1MV2W@1224|Proteobacteria,2TRT8@28211|Alphaproteobacteria,2P3KE@2433|Roseobacter	28211|Alphaproteobacteria	I	Acyltransferase family	-	-	-	-	-	-	-	-	-	-	-	-	Acyl_transf_3
DYD3_k127_5981543_12	862908.BMS_2276	3.228e-81	275.0	COG0500@1|root,COG0500@2|Bacteria,1R947@1224|Proteobacteria,432GY@68525|delta/epsilon subdivisions,2WYII@28221|Deltaproteobacteria	28221|Deltaproteobacteria	Q	Methyltransferase	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_5981543_27	1497679.EP56_13040	2.101e-23	109.0	COG0726@1|root,COG0726@2|Bacteria,1V6AW@1239|Firmicutes,4HHC9@91061|Bacilli,26MBX@186820|Listeriaceae	91061|Bacilli	G	Polysaccharide deacetylase	yxkH	-	-	-	-	-	-	-	-	-	-	-	Polysacc_deac_1
DYD3_k127_5981543_22	351348.Maqu_0779	6.924e-30	132.0	COG0438@1|root,COG0438@2|Bacteria,1NE3V@1224|Proteobacteria,1RQE3@1236|Gammaproteobacteria	1236|Gammaproteobacteria	M	Catalyzes the addition of the first glucose residue to the LPS core	-	-	-	ko:K02844	ko00540,ko01100,map00540,map01100	M00080	-	-	ko00000,ko00001,ko00002,ko01000,ko01003,ko01005	-	GT4	-	Glyco_transf_4,Glycos_transf_1
DYD3_k127_5981543_7	156889.Mmc1_1641	7.151e-144	470.0	COG0513@1|root,COG0513@2|Bacteria,1MU49@1224|Proteobacteria,2TR6Q@28211|Alphaproteobacteria	28211|Alphaproteobacteria	L	Belongs to the DEAD box helicase family	rhlE	-	3.6.4.13	ko:K11927	ko03018,map03018	-	-	-	ko00000,ko00001,ko01000,ko03019	-	-	-	DEAD,Helicase_C
DYD3_k127_5981543_33	331678.Cphamn1_2470	0.0002845	49.0	COG2913@1|root,COG2913@2|Bacteria	2|Bacteria	J	Gram-negative-bacterium-type cell outer membrane assembly	-	-	-	-	-	-	-	-	-	-	-	-	SmpA_OmlA
DYD3_k127_5981543_30	1457393.AZ09_00360	4.185e-11	66.0	COG4456@1|root,COG4456@2|Bacteria	2|Bacteria	-	-	vagC	-	-	ko:K18829	-	-	-	-	ko00000,ko02048	-	-	-	MazE_antitoxin
DYD3_k127_5981543_28	1125700.HMPREF9195_02390	1.898e-14	78.0	COG1487@1|root,COG1487@2|Bacteria,2J7WP@203691|Spirochaetes	203691|Spirochaetes	S	Toxic component of a toxin-antitoxin (TA) module. An RNase	-	-	-	ko:K18828	-	-	-	-	ko00000,ko01000,ko02048,ko03016	-	-	-	PIN
DYD3_k127_5981543_9	608538.HTH_1357	6.46e-135	436.0	COG0451@1|root,COG0451@2|Bacteria,2G3NS@200783|Aquificae	200783|Aquificae	M	PFAM NAD-dependent epimerase dehydratase	-	-	-	-	-	-	-	-	-	-	-	-	GDP_Man_Dehyd
DYD3_k127_5981543_20	387092.NIS_1415	1.932e-40	168.0	COG2194@1|root,COG2194@2|Bacteria,1MWS7@1224|Proteobacteria,42MI1@68525|delta/epsilon subdivisions,2YQ0U@29547|Epsilonproteobacteria	29547|Epsilonproteobacteria	S	Sulfatase	-	-	-	ko:K19353	ko00540,map00540	-	-	-	ko00000,ko00001,ko01000,ko01005	-	-	-	Sulfatase
DYD3_k127_5981543_15	1095743.HMPREF1054_1851	2.9e-52	192.0	COG1720@1|root,COG1720@2|Bacteria,1MUF0@1224|Proteobacteria,1RPCX@1236|Gammaproteobacteria,1Y72C@135625|Pasteurellales	135625|Pasteurellales	S	Uncharacterised protein family UPF0066	Z012_01880	GO:0000049,GO:0001510,GO:0003674,GO:0003676,GO:0003723,GO:0003824,GO:0005488,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016426,GO:0016740,GO:0016741,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0071704,GO:0089715,GO:0090304,GO:0097159,GO:0140098,GO:0140101,GO:1901360,GO:1901363	-	-	-	-	-	-	-	-	-	-	UPF0066
DYD3_k127_5981543_5	1242864.D187_002916	3.938e-150	492.0	COG0659@1|root,COG0659@2|Bacteria,1MX8F@1224|Proteobacteria,43AHM@68525|delta/epsilon subdivisions,2X5XU@28221|Deltaproteobacteria,2YU25@29|Myxococcales	28221|Deltaproteobacteria	U	Sulfate transporter	-	-	-	-	-	-	-	-	-	-	-	-	Sulfate_transp
DYD3_k127_5981543_31	36331.EPrPI00000016641	3.924e-09	65.0	COG5640@1|root,KOG3627@2759|Eukaryota,1MIRM@121069|Pythiales	2759|Eukaryota	E	Serine protease family S01A. Source PGD	-	-	-	-	-	-	-	-	-	-	-	-	Trypsin
DYD3_k127_5981543_34	36331.EPrPI00000016641	0.0004914	50.0	COG5640@1|root,KOG3627@2759|Eukaryota,1MIRM@121069|Pythiales	2759|Eukaryota	E	Serine protease family S01A. Source PGD	-	-	-	-	-	-	-	-	-	-	-	-	Trypsin
DYD3_k127_5981543_13	1267211.KI669560_gene370	2.215e-79	270.0	COG0288@1|root,COG0288@2|Bacteria,4NEJT@976|Bacteroidetes,1IQ7Q@117747|Sphingobacteriia	976|Bacteroidetes	P	Reversible hydration of carbon dioxide	-	-	4.2.1.1	ko:K01673	ko00910,map00910	-	R00132,R10092	RC02807	ko00000,ko00001,ko01000	-	-	-	Pro_CA
DYD3_k127_5981543_3	700598.Niako_6658	3.163e-160	520.0	COG0659@1|root,COG0659@2|Bacteria,4NE9G@976|Bacteroidetes,1INYY@117747|Sphingobacteriia	976|Bacteroidetes	P	COGs COG0659 Sulfate permease and related transporter (MFS superfamily)	-	-	-	ko:K03321	-	-	-	-	ko00000,ko02000	2.A.53.3	-	-	Sulfate_transp
DYD3_k127_5981543_21	911008.GLAD_00405	4.168e-39	153.0	COG0179@1|root,COG0179@2|Bacteria,1MVFA@1224|Proteobacteria,1RN6Y@1236|Gammaproteobacteria	1236|Gammaproteobacteria	Q	COG0179 2-keto-4-pentenoate hydratase 2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway)	ycgM	-	-	-	-	-	-	-	-	-	-	-	FAA_hydrolase
DYD3_k127_5981543_26	754476.Q7A_2962	1.112e-25	110.0	COG2967@1|root,COG2967@2|Bacteria,1MZ2Z@1224|Proteobacteria,1S8SE@1236|Gammaproteobacteria,46106@72273|Thiotrichales	72273|Thiotrichales	P	ApaG domain	apaG	-	-	ko:K06195	-	-	-	-	ko00000	-	-	-	DUF525
DYD3_k127_5981543_17	192952.MM_1634	2.308e-48	176.0	COG0229@1|root,arCOG02815@2157|Archaea,2XXVK@28890|Euryarchaeota,2N9RZ@224756|Methanomicrobia	224756|Methanomicrobia	C	TIGRFAM methionine-R-sulfoxide reductase	msrB	-	1.8.4.12	ko:K07305	-	-	-	-	ko00000,ko01000	-	-	-	SelR
DYD3_k127_5981543_14	862908.BMS_1105	8.325e-59	214.0	COG0697@1|root,COG0697@2|Bacteria	2|Bacteria	EG	spore germination	-	-	-	ko:K03298	-	-	-	-	ko00000,ko02000	2.A.7.3	-	-	EamA
DYD3_k127_5981543_0	1185876.BN8_05143	0.0	1656.0	COG0646@1|root,COG1410@1|root,COG0646@2|Bacteria,COG1410@2|Bacteria,4NFRF@976|Bacteroidetes,47K8Q@768503|Cytophagia	976|Bacteroidetes	E	Vitamin B12 dependent methionine synthase activation	metH	-	2.1.1.13	ko:K00548	ko00270,ko00450,ko00670,ko01100,ko01110,ko01230,map00270,map00450,map00670,map01100,map01110,map01230	M00017	R00946,R09365	RC00035,RC00113,RC01241	ko00000,ko00001,ko00002,ko01000	-	-	-	B12-binding,B12-binding_2,Met_synt_B12,Pterin_bind,S-methyl_trans
DYD3_k127_5981543_6	153721.MYP_2233	7.605e-148	473.0	COG0685@1|root,COG0685@2|Bacteria,4NDY0@976|Bacteroidetes,47KQ7@768503|Cytophagia	976|Bacteroidetes	E	Methylenetetrahydrofolate reductase	metF	-	1.5.1.20	ko:K00297	ko00670,ko00720,ko01100,ko01120,ko01200,ko01523,map00670,map00720,map01100,map01120,map01200,map01523	M00377	R01224,R07168	RC00081	ko00000,ko00001,ko00002,ko01000	-	-	-	MTHFR
DYD3_k127_5981543_23	1201290.M902_1861	4.406e-29	120.0	COG3011@1|root,COG3011@2|Bacteria	2|Bacteria	CH	Protein conserved in bacteria	-	-	-	-	-	-	-	-	-	-	-	-	DUF393
DYD3_k127_5981543_1	1313421.JHBV01000039_gene2680	2.596e-183	587.0	COG3211@1|root,COG3211@2|Bacteria,4NJ5V@976|Bacteroidetes	976|Bacteroidetes	P	twin-arginine translocation pathway signal protein	-	-	-	ko:K07093	-	-	-	-	ko00000	-	-	-	DUF839
DYD3_k127_5981543_32	1101195.Meth11DRAFT_2562	6.1e-08	58.0	COG3411@1|root,COG3411@2|Bacteria,1MZR4@1224|Proteobacteria,2VTY1@28216|Betaproteobacteria,2KMYE@206350|Nitrosomonadales	206350|Nitrosomonadales	C	Ferredoxin	-	-	-	-	-	-	-	-	-	-	-	-	2Fe-2S_thioredx
DYD3_k127_5981543_8	1201288.M900_1245	1.447e-135	447.0	COG2866@1|root,COG2866@2|Bacteria,1MZYN@1224|Proteobacteria,42PTT@68525|delta/epsilon subdivisions,2MT5U@213481|Bdellovibrionales,2WS13@28221|Deltaproteobacteria	213481|Bdellovibrionales	M	Zn_pept	-	-	3.4.17.18	ko:K05996	-	-	-	-	ko00000,ko01000,ko01002	-	-	-	Peptidase_M14
DYD3_k127_5981543_24	862908.BMS_0666	4.752e-29	131.0	COG0457@1|root,COG2197@1|root,COG0457@2|Bacteria,COG2197@2|Bacteria	2|Bacteria	K	response regulator	-	-	-	ko:K02282	-	-	-	-	ko00000,ko02035,ko02044	-	-	-	HTH_18,Response_reg
DYD3_k127_5981543_4	1189612.A33Q_2633	2.179e-157	510.0	COG2239@1|root,COG2239@2|Bacteria,4NGGN@976|Bacteroidetes,47JTX@768503|Cytophagia	976|Bacteroidetes	P	Acts as a magnesium transporter	-	-	-	ko:K06213	-	-	-	-	ko00000,ko02000	1.A.26.1	-	-	CBS,MgtE,MgtE_N
DYD3_k127_5981543_2	326298.Suden_1734	7.459e-181	576.0	COG0662@1|root,COG0836@1|root,COG0662@2|Bacteria,COG0836@2|Bacteria,1MV39@1224|Proteobacteria,42MDP@68525|delta/epsilon subdivisions,2YMW3@29547|Epsilonproteobacteria	29547|Epsilonproteobacteria	GM	Belongs to the mannose-6-phosphate isomerase type 2 family	manC	-	2.7.7.13	ko:K00971	ko00051,ko00520,ko01100,ko01110,map00051,map00520,map01100,map01110	M00114,M00361,M00362	R00885	RC00002	ko00000,ko00001,ko00002,ko01000	-	-	-	MannoseP_isomer,NTP_transferase
DYD3_k127_5981543_18	1128427.KB904821_gene1968	3.972e-48	182.0	COG2120@1|root,COG2120@2|Bacteria	2|Bacteria	S	N-acetylglucosaminylinositol deacetylase activity	-	-	-	-	-	-	-	-	-	-	-	-	PIG-L
DYD3_k127_5981543_16	1041146.ATZB01000005_gene6028	6.954e-52	192.0	COG0363@1|root,COG0363@2|Bacteria,1MVEA@1224|Proteobacteria,2TUA5@28211|Alphaproteobacteria,4BKYJ@82115|Rhizobiaceae	28211|Alphaproteobacteria	G	Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase	nagB	-	3.5.99.6	ko:K02564	ko00520,ko01100,map00520,map01100	-	R00765	RC00163	ko00000,ko00001,ko01000	-	-	-	Glucosamine_iso
DYD3_k127_5992389_3	1510531.JQJJ01000009_gene981	3.567e-07	59.0	COG5640@1|root,COG5640@2|Bacteria,1NPS4@1224|Proteobacteria,2U4PS@28211|Alphaproteobacteria,3JTQ3@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	O	Trypsin-like serine protease	MA20_23090	-	-	-	-	-	-	-	-	-	-	-	Trypsin
DYD3_k127_5992389_5	931277.C448_09657	0.0003129	47.0	arCOG03899@1|root,arCOG03899@2157|Archaea,2Y079@28890|Euryarchaeota,23XF4@183963|Halobacteria	183963|Halobacteria	L	HNH endonuclease	-	-	-	-	-	-	-	-	-	-	-	-	HNH_3
DYD3_k127_5992389_1	1223542.GM1_036_00240	1.355e-55	205.0	COG0596@1|root,COG0596@2|Bacteria,2I1Q9@201174|Actinobacteria,4GFFK@85026|Gordoniaceae	201174|Actinobacteria	S	alpha/beta hydrolase fold	-	-	-	-	-	-	-	-	-	-	-	-	Abhydrolase_1,Abhydrolase_6
DYD3_k127_5992389_2	448385.sce0969	5.193e-15	87.0	COG1409@1|root,COG1409@2|Bacteria,1R0BM@1224|Proteobacteria,43CTY@68525|delta/epsilon subdivisions,2X81I@28221|Deltaproteobacteria	28221|Deltaproteobacteria	G	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_5992389_4	485918.Cpin_4142	1.578e-05	53.0	COG3209@1|root,COG3209@2|Bacteria,4NE5D@976|Bacteroidetes,1IRXE@117747|Sphingobacteriia	976|Bacteroidetes	M	RHS repeat-associated core domain protein	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_5992389_0	1353531.AZNX01000003_gene2767	3.455e-98	325.0	COG0580@1|root,COG0580@2|Bacteria,1MXTJ@1224|Proteobacteria,2TRGG@28211|Alphaproteobacteria,4BABN@82115|Rhizobiaceae	28211|Alphaproteobacteria	G	Channel that permits osmotically driven movement of water in both directions. It is involved in the osmoregulation and in the maintenance of cell turgor during volume expansion in rapidly growing cells. It mediates rapid entry or exit of water in response to abrupt changes in osmolarity	aqpZ	-	-	ko:K06188	-	-	-	-	ko00000,ko02000	1.A.8	-	-	MIP
DYD3_k127_600722_2	344747.PM8797T_31760	1.347e-06	53.0	COG0044@1|root,COG0044@2|Bacteria,2IWWW@203682|Planctomycetes	203682|Planctomycetes	F	dihydroorotase	-	-	3.5.2.2,3.5.2.3,3.5.2.5	ko:K01464,ko:K01465,ko:K01466	ko00230,ko00240,ko00410,ko00770,ko00983,ko01100,ko01120,map00230,map00240,map00410,map00770,map00983,map01100,map01120	M00046,M00051,M00546	R01993,R02269,R02425,R03055,R08227	RC00632,RC00680	ko00000,ko00001,ko00002,ko01000,ko04147	-	-	-	Amidohydro_1
DYD3_k127_600722_1	880073.Calab_0083	2.781e-57	209.0	COG4221@1|root,COG4221@2|Bacteria	2|Bacteria	IQ	oxidoreductase activity	sdh	-	1.1.1.276,1.1.1.313,1.1.1.381	ko:K05886,ko:K15373,ko:K16066	ko00240,ko00260,ko00430,ko01100,map00240,map00260,map00430,map01100	-	R02600,R09289,R10851,R10852	RC00087,RC00525,RC03288	ko00000,ko00001,ko01000	-	-	-	adh_short
DYD3_k127_600722_0	1535287.JP74_16670	0.0	1230.0	COG1048@1|root,COG1048@2|Bacteria,1MU9T@1224|Proteobacteria,2TT3T@28211|Alphaproteobacteria,3N66E@45401|Hyphomicrobiaceae	28211|Alphaproteobacteria	C	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate	acnA	GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003730,GO:0003824,GO:0003994,GO:0005488,GO:0006082,GO:0006091,GO:0006099,GO:0006101,GO:0006629,GO:0006631,GO:0008150,GO:0008152,GO:0009060,GO:0009987,GO:0015980,GO:0016829,GO:0016835,GO:0016836,GO:0016999,GO:0017144,GO:0019541,GO:0019679,GO:0019752,GO:0032787,GO:0043436,GO:0044237,GO:0044238,GO:0044255,GO:0044281,GO:0045333,GO:0046459,GO:0047456,GO:0048037,GO:0051536,GO:0051539,GO:0051540,GO:0055114,GO:0071704,GO:0072350,GO:0097159,GO:1901363	4.2.1.3	ko:K01681	ko00020,ko00630,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01210,ko01230,map00020,map00630,map00720,map01100,map01110,map01120,map01130,map01200,map01210,map01230	M00009,M00010,M00012,M00173,M00740	R01324,R01325,R01900	RC00497,RC00498,RC00618	br01601,ko00000,ko00001,ko00002,ko01000	-	-	-	Aconitase,Aconitase_C
DYD3_k127_6013450_1	1007103.AFHW01000096_gene3245	8.073e-61	231.0	COG4626@1|root,COG4626@2|Bacteria,1TPU1@1239|Firmicutes,4HAXI@91061|Bacilli,26UM1@186822|Paenibacillaceae	91061|Bacilli	S	Terminase	-	-	-	-	-	-	-	-	-	-	-	-	Terminase_1
DYD3_k127_6013450_2	1123288.SOV_6c00350	3.213e-39	163.0	COG4695@1|root,COG4695@2|Bacteria,1TP8B@1239|Firmicutes,4H3A0@909932|Negativicutes	909932|Negativicutes	L	Phage portal protein	-	-	-	-	-	-	-	-	-	-	-	-	Phage_portal
DYD3_k127_6013450_3	1082705.JIBP01000010_gene168	8.819e-34	138.0	COG3740@1|root,COG3740@2|Bacteria,1NHKT@1224|Proteobacteria,1S55B@1236|Gammaproteobacteria	1236|Gammaproteobacteria	S	Prohead protease	-	-	-	ko:K06904	-	-	-	-	ko00000	-	-	-	Peptidase_S78
DYD3_k127_6013450_0	698761.RTCIAT899_CH08175	1.079e-65	241.0	COG4653@1|root,COG4653@2|Bacteria,1MWU1@1224|Proteobacteria,2VF2A@28211|Alphaproteobacteria,4BNAP@82115|Rhizobiaceae	28211|Alphaproteobacteria	S	Phage capsid family	-	-	-	-	-	-	-	-	-	-	-	-	Phage_capsid
DYD3_k127_6013450_4	1231190.NA8A_19835	3.213e-20	98.0	2CK39@1|root,32SBG@2|Bacteria,1MZ6F@1224|Proteobacteria,2UBT5@28211|Alphaproteobacteria,43K3I@69277|Phyllobacteriaceae	28211|Alphaproteobacteria	S	Phage gp6-like head-tail connector protein	-	-	-	-	-	-	-	-	-	-	-	-	Phage_connect_1
DYD3_k127_6013450_5	1097668.BYI23_B000690	0.0003809	48.0	COG5614@1|root,COG5614@2|Bacteria,1N9Y5@1224|Proteobacteria,2VVUE@28216|Betaproteobacteria,1KA1G@119060|Burkholderiaceae	28216|Betaproteobacteria	S	Phage head-tail joining protein	-	-	-	-	-	-	-	-	-	-	-	-	Phage_H_T_join
DYD3_k127_6064813_12	290397.Adeh_3987	0.000172	49.0	COG1403@1|root,COG1403@2|Bacteria	2|Bacteria	V	endonuclease activity	-	-	-	ko:K07451	-	-	-	-	ko00000,ko01000,ko02048	-	-	-	HNH,HNH_4
DYD3_k127_6064813_10	102125.Xen7305DRAFT_00049780	3.323e-15	85.0	COG1295@1|root,COG1295@2|Bacteria,1G1HS@1117|Cyanobacteria,3VJE3@52604|Pleurocapsales	1117|Cyanobacteria	S	Virulence factor BrkB	-	-	-	ko:K07058	-	-	-	-	ko00000	-	-	-	Virul_fac_BrkB
DYD3_k127_6064813_4	1201288.M900_2244	2.756e-54	196.0	COG0663@1|root,COG0663@2|Bacteria,1RD76@1224|Proteobacteria,42MR0@68525|delta/epsilon subdivisions,2MT6M@213481|Bdellovibrionales,2WP23@28221|Deltaproteobacteria	213481|Bdellovibrionales	P	transferase hexapeptide	yrdA	-	-	-	-	-	-	-	-	-	-	-	Hexapep
DYD3_k127_6064813_11	1122619.KB892368_gene2425	3.405e-11	75.0	COG1503@1|root,COG1503@2|Bacteria,1MXX2@1224|Proteobacteria,2VPFW@28216|Betaproteobacteria	28216|Betaproteobacteria	J	translation release factor activity	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_6064813_6	880074.BARVI_04720	1.146e-49	188.0	COG1940@1|root,COG1940@2|Bacteria,4NFZ1@976|Bacteroidetes,2FNGN@200643|Bacteroidia,22WUD@171551|Porphyromonadaceae	976|Bacteroidetes	G	glucokinase	glk	-	2.7.1.2	ko:K00845	ko00010,ko00052,ko00500,ko00520,ko00521,ko00524,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00052,map00500,map00520,map00521,map00524,map01100,map01110,map01120,map01130,map01200	M00001,M00549	R00299,R01600,R01786	RC00002,RC00017	ko00000,ko00001,ko00002,ko01000	-	-	-	ROK
DYD3_k127_6064813_7	530564.Psta_1948	3.224e-49	182.0	COG0424@1|root,COG0424@2|Bacteria,2IZQQ@203682|Planctomycetes	203682|Planctomycetes	D	TIGRFAM maf protein	-	-	-	ko:K06287	-	-	-	-	ko00000	-	-	-	Maf
DYD3_k127_6064813_5	264462.Bd3539	9.331e-50	194.0	COG3540@1|root,COG3540@2|Bacteria	2|Bacteria	P	PhoD-like phosphatase	-	-	3.1.3.1	ko:K01113	ko00790,ko01100,ko02020,map00790,map01100,map02020	M00126	R04620	RC00017	ko00000,ko00001,ko00002,ko01000	-	-	-	PhoD
DYD3_k127_6064813_1	1201288.M900_1378	8.806e-80	278.0	COG2334@1|root,COG2334@2|Bacteria,1MU2Q@1224|Proteobacteria,42QEX@68525|delta/epsilon subdivisions,2MSY0@213481|Bdellovibrionales,2WMFU@28221|Deltaproteobacteria	213481|Bdellovibrionales	F	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response	srkA	-	-	-	-	-	-	-	-	-	-	-	APH
DYD3_k127_6064813_2	1487923.DP73_04090	6.129e-70	254.0	COG1215@1|root,COG1215@2|Bacteria,1TR2P@1239|Firmicutes,248SW@186801|Clostridia,2675M@186807|Peptococcaceae	186801|Clostridia	M	Glycosyl transferase family group 2	-	-	-	-	-	-	-	-	-	-	-	-	Glyco_hydro_18,Glyco_tranf_2_3,Glycos_transf_2,Polysacc_deac_1
DYD3_k127_6064813_3	862908.BMS_0649	1.123e-54	200.0	COG3148@1|root,COG3148@2|Bacteria,1MZCN@1224|Proteobacteria,42S7K@68525|delta/epsilon subdivisions,2MU2H@213481|Bdellovibrionales,2WQI0@28221|Deltaproteobacteria	213481|Bdellovibrionales	S	DTW	-	-	-	ko:K05812	-	-	-	-	ko00000	-	-	-	DTW
DYD3_k127_6064813_9	1353529.M899_1467	9.49e-30	122.0	COG0023@1|root,COG0023@2|Bacteria,1MZ8T@1224|Proteobacteria,42TW6@68525|delta/epsilon subdivisions,2MTFV@213481|Bdellovibrionales,2WQNT@28221|Deltaproteobacteria	213481|Bdellovibrionales	J	Translation initiation factor SUI1	yciH	-	-	ko:K03113	ko03013,map03013	-	-	-	ko00000,ko00001,ko03012	-	-	-	SUI1
DYD3_k127_6064813_0	1219031.BBJR01000025_gene32	2.624e-85	285.0	COG1187@1|root,COG1187@2|Bacteria,1R9VV@1224|Proteobacteria,2VQAQ@28216|Betaproteobacteria,4ACWW@80864|Comamonadaceae	28216|Betaproteobacteria	J	Belongs to the pseudouridine synthase RsuA family	rluE	-	5.4.99.20	ko:K06181	-	-	-	-	ko00000,ko01000,ko03009	-	-	-	PseudoU_synth_2
DYD3_k127_6064813_8	686340.Metal_1626	5.152e-41	158.0	COG0659@1|root,COG0659@2|Bacteria,1MVWV@1224|Proteobacteria,1RMCN@1236|Gammaproteobacteria,1XDZX@135618|Methylococcales	135618|Methylococcales	P	PFAM Sulphate transporter	-	-	-	-	-	-	-	-	-	-	-	-	Sulfate_transp
DYD3_k127_6077836_2	1121448.DGI_1229	3.817e-81	277.0	COG0708@1|root,COG0708@2|Bacteria,1MVII@1224|Proteobacteria,42R8B@68525|delta/epsilon subdivisions,2X5KI@28221|Deltaproteobacteria,2MGSH@213115|Desulfovibrionales	28221|Deltaproteobacteria	L	Endonuclease/Exonuclease/phosphatase family	xth	-	3.1.11.2	ko:K01142	ko03410,map03410	-	-	-	ko00000,ko00001,ko01000,ko03400	-	-	-	Exo_endo_phos
DYD3_k127_6077836_5	1353529.M899_1682	3.981e-10	65.0	COG2204@1|root,COG2204@2|Bacteria,1RHEG@1224|Proteobacteria,42T1C@68525|delta/epsilon subdivisions,2WP30@28221|Deltaproteobacteria	28221|Deltaproteobacteria	T	PFAM response regulator receiver	-	-	-	-	-	-	-	-	-	-	-	-	Response_reg
DYD3_k127_6077836_0	862908.BMS_1461	5.473e-129	427.0	COG0402@1|root,COG0402@2|Bacteria,1MUPT@1224|Proteobacteria	1224|Proteobacteria	F	Guanine deaminase	guaD	-	3.5.4.3	ko:K01487	ko00230,ko01100,map00230,map01100	-	R01676	RC00204	ko00000,ko00001,ko01000	-	-	-	Amidohydro_1
DYD3_k127_6077836_1	862908.BMS_1460	3.32e-102	347.0	COG1030@1|root,COG1030@2|Bacteria,1MUJN@1224|Proteobacteria,42MWM@68525|delta/epsilon subdivisions,2MU18@213481|Bdellovibrionales,2WK3H@28221|Deltaproteobacteria	213481|Bdellovibrionales	O	Membrane-bound serine protease (ClpP class)	nfeD	-	-	ko:K07403	-	-	-	-	ko00000	-	-	-	CLP_protease,NfeD,SDH_sah
DYD3_k127_6077836_3	862908.BMS_1456	5.051e-56	198.0	COG0330@1|root,COG0330@2|Bacteria,1MUM8@1224|Proteobacteria,42NX0@68525|delta/epsilon subdivisions,2MTG6@213481|Bdellovibrionales,2WISZ@28221|Deltaproteobacteria	213481|Bdellovibrionales	O	PFAM Band 7 protein	-	-	-	-	-	-	-	-	-	-	-	-	Band_7
DYD3_k127_6093191_0	1121920.AUAU01000010_gene72	4.312e-228	715.0	COG0365@1|root,COG0365@2|Bacteria,3Y39K@57723|Acidobacteria	57723|Acidobacteria	I	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA	acsA	-	6.2.1.1	ko:K01895	ko00010,ko00620,ko00640,ko00680,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00620,map00640,map00680,map00720,map01100,map01110,map01120,map01130,map01200	M00357	R00235,R00236,R00316,R00926,R01354	RC00004,RC00012,RC00043,RC00070,RC02746,RC02816	ko00000,ko00001,ko00002,ko01000,ko01004	-	-	-	ACAS_N,AMP-binding,AMP-binding_C
DYD3_k127_6093191_6	1353529.M899_1201	1.113e-68	244.0	COG0789@1|root,COG0789@2|Bacteria,1R2NF@1224|Proteobacteria,43AJU@68525|delta/epsilon subdivisions,2MUE0@213481|Bdellovibrionales,2X600@28221|Deltaproteobacteria	213481|Bdellovibrionales	K	helix_turn_helix, mercury resistance	-	-	-	ko:K22491	-	-	-	-	ko00000,ko03000	-	-	-	B12-binding,MerR_1
DYD3_k127_6093191_16	329726.AM1_5087	1.566e-05	52.0	COG3686@1|root,COG3686@2|Bacteria,1GEF8@1117|Cyanobacteria	1117|Cyanobacteria	S	MAPEG family	-	-	-	-	-	-	-	-	-	-	-	-	MAPEG
DYD3_k127_6093191_5	1500894.JQNN01000001_gene2441	1.984e-70	244.0	COG4845@1|root,COG4845@2|Bacteria,1NJRF@1224|Proteobacteria,2W22D@28216|Betaproteobacteria,4756T@75682|Oxalobacteraceae	28216|Betaproteobacteria	V	Chloramphenicol acetyltransferase	-	-	2.3.1.28	ko:K19271	-	-	-	-	br01600,ko00000,ko01000,ko01504	-	-	-	CAT
DYD3_k127_6093191_8	862908.BMS_0521	5.538e-55	198.0	2EMZ3@1|root,344KA@2|Bacteria,1P09V@1224|Proteobacteria,431IA@68525|delta/epsilon subdivisions,2MU8E@213481|Bdellovibrionales,2WWQA@28221|Deltaproteobacteria	213481|Bdellovibrionales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_6093191_14	1177154.Y5S_00424	1.988e-12	74.0	COG1017@1|root,COG1017@2|Bacteria,1RI9P@1224|Proteobacteria,1S7H7@1236|Gammaproteobacteria,1XMN2@135619|Oceanospirillales	135619|Oceanospirillales	C	nitric oxide dioxygenase activity	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_6093191_2	526218.Sterm_0333	1.721e-183	589.0	COG1520@1|root,COG1520@2|Bacteria	2|Bacteria	S	amino acid activation for nonribosomal peptide biosynthetic process	-	-	-	-	-	-	-	-	-	-	-	-	Cu_amine_oxidN1,LRR_4,PQQ_3
DYD3_k127_6093191_10	1300345.LF41_3091	5.285e-31	126.0	COG2149@1|root,COG2149@2|Bacteria	2|Bacteria	S	membrane	-	-	-	ko:K00389	-	-	-	-	ko00000	-	-	-	DUF202
DYD3_k127_6093191_11	1300345.LF41_3090	7.644e-29	119.0	COG4828@1|root,COG4828@2|Bacteria,1RM43@1224|Proteobacteria,1TFHB@1236|Gammaproteobacteria,1X94Y@135614|Xanthomonadales	135614|Xanthomonadales	S	Protein of unknown function (DUF1622)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1622
DYD3_k127_6093191_3	172045.KS04_19545	4.126e-123	404.0	COG1024@1|root,COG1024@2|Bacteria,4NKRR@976|Bacteroidetes,1I0UX@117743|Flavobacteriia,34QI7@308865|Elizabethkingia	976|Bacteroidetes	I	Enoyl-CoA hydratase/isomerase	-	-	-	-	-	-	-	-	-	-	-	-	ECH_2
DYD3_k127_6093191_7	862908.BMS_2498	1.786e-66	235.0	COG1073@1|root,COG1073@2|Bacteria	2|Bacteria	S	thiolester hydrolase activity	-	-	3.1.1.85	ko:K02170,ko:K07002	ko00780,ko01100,map00780,map01100	M00572	R09725	RC00460,RC00461	ko00000,ko00001,ko00002,ko01000	-	-	-	Abhydrolase_1,Abhydrolase_6,Hydrolase_4,Ser_hydrolase
DYD3_k127_6093191_4	1353529.M899_2476	2.871e-96	324.0	COG1600@1|root,COG1600@2|Bacteria,1MV1H@1224|Proteobacteria,42PNR@68525|delta/epsilon subdivisions,2MT0T@213481|Bdellovibrionales,2WK3I@28221|Deltaproteobacteria	213481|Bdellovibrionales	C	Iron-sulfur	yjeS	-	1.17.99.6	ko:K18979	-	-	-	-	ko00000,ko01000,ko03016	-	-	-	DUF1730,Fer4_16,HEAT_2
DYD3_k127_6093191_1	1201288.M900_A0033	4.282e-217	687.0	COG0469@1|root,COG0469@2|Bacteria,1MU21@1224|Proteobacteria,42N30@68525|delta/epsilon subdivisions,2MSUC@213481|Bdellovibrionales,2WJSW@28221|Deltaproteobacteria	213481|Bdellovibrionales	G	Belongs to the pyruvate kinase family	pyk	-	2.7.1.40	ko:K00873	ko00010,ko00230,ko00620,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko04930,ko05165,ko05203,ko05230,map00010,map00230,map00620,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map04930,map05165,map05203,map05230	M00001,M00002,M00049,M00050	R00200,R00430,R01138,R01858,R02320	RC00002,RC00015	ko00000,ko00001,ko00002,ko01000,ko04131,ko04147	-	-	iAF987.Gmet_0122	PK,PK_C
DYD3_k127_6107123_4	765869.BDW_10820	1.194e-71	256.0	COG2982@1|root,COG2982@2|Bacteria,1P6EN@1224|Proteobacteria,42TSC@68525|delta/epsilon subdivisions,2MSW2@213481|Bdellovibrionales,2WQ20@28221|Deltaproteobacteria	213481|Bdellovibrionales	M	Protein involved in outer membrane biogenesis	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_6107123_5	1353529.M899_0940	3.559e-57	203.0	COG3216@1|root,COG3216@2|Bacteria,1N1Q6@1224|Proteobacteria,42VQP@68525|delta/epsilon subdivisions,2MSZU@213481|Bdellovibrionales,2WRUZ@28221|Deltaproteobacteria	213481|Bdellovibrionales	S	Uncharacterized protein conserved in bacteria (DUF2062)	-	-	-	-	-	-	-	-	-	-	-	-	DUF2062
DYD3_k127_6107123_3	401526.TcarDRAFT_2626	1.649e-95	323.0	COG1087@1|root,COG1087@2|Bacteria,1TQ7N@1239|Firmicutes,4H33Z@909932|Negativicutes	909932|Negativicutes	M	Belongs to the NAD(P)-dependent epimerase dehydratase family	galE	-	5.1.3.2	ko:K01784	ko00052,ko00520,ko01100,map00052,map00520,map01100	M00361,M00362,M00632	R00291,R02984	RC00289	ko00000,ko00001,ko00002,ko01000	-	-	-	Epimerase
DYD3_k127_6107123_1	760117.JN27_18415	5.561e-147	475.0	COG0562@1|root,COG0562@2|Bacteria,1MV4H@1224|Proteobacteria,2VMKV@28216|Betaproteobacteria,475CI@75682|Oxalobacteraceae	28216|Betaproteobacteria	M	UDP-galactopyranose mutase	glf	-	5.4.99.9	ko:K01854	ko00052,ko00520,map00052,map00520	-	R00505,R09009	RC00317,RC02396	ko00000,ko00001,ko01000	-	-	-	GLF,NAD_binding_8
DYD3_k127_6107123_0	211165.AJLN01000100_gene4333	3.224e-149	496.0	COG1091@1|root,COG2723@1|root,COG1091@2|Bacteria,COG2723@2|Bacteria,1G1JP@1117|Cyanobacteria,1JJI6@1189|Stigonemataceae	1117|Cyanobacteria	M	Glycosyl hydrolase family 1	-	-	1.1.1.133	ko:K00067	ko00521,ko00523,ko01130,map00521,map00523,map01130	M00793	R02777	RC00182	ko00000,ko00001,ko00002,ko01000	-	-	-	Glyco_hydro_1,RmlD_sub_bind
DYD3_k127_6107123_2	211165.AJLN01000100_gene4334	1.473e-110	368.0	COG0438@1|root,COG0562@1|root,COG0438@2|Bacteria,COG0562@2|Bacteria,1G3KR@1117|Cyanobacteria,1JMWG@1189|Stigonemataceae	1117|Cyanobacteria	M	FAD-NAD(P)-binding	-	-	5.4.99.9	ko:K01854	ko00052,ko00520,map00052,map00520	-	R00505,R09009	RC00317,RC02396	ko00000,ko00001,ko01000	-	-	-	GLF,Glyco_trans_1_4,NAD_binding_8
DYD3_k127_6134269_16	452662.SJA_C1-31730	5.421e-59	210.0	COG0583@1|root,COG0583@2|Bacteria,1MU2E@1224|Proteobacteria,2TUNU@28211|Alphaproteobacteria,2K31H@204457|Sphingomonadales	204457|Sphingomonadales	K	Transcriptional regulator	-	-	-	-	-	-	-	-	-	-	-	-	HTH_1,LysR_substrate
DYD3_k127_6134269_30	1500259.JQLD01000004_gene1205	1.238e-28	117.0	COG0583@1|root,COG0583@2|Bacteria,1MU2E@1224|Proteobacteria,2TUNU@28211|Alphaproteobacteria,4B86W@82115|Rhizobiaceae	28211|Alphaproteobacteria	K	Transcriptional regulator	-	-	-	-	-	-	-	-	-	-	-	-	HTH_1,LysR_substrate
DYD3_k127_6134269_7	348824.LPU83_0347	3.096e-99	331.0	COG1028@1|root,COG1028@2|Bacteria,1MWZE@1224|Proteobacteria,2U09J@28211|Alphaproteobacteria,4BB98@82115|Rhizobiaceae	28211|Alphaproteobacteria	IQ	short-chain dehydrogenase	-	-	-	-	-	-	-	-	-	-	-	-	adh_short,adh_short_C2
DYD3_k127_6134269_31	1336235.JAEG01000001_gene1790	2.097e-18	88.0	COG4538@1|root,COG4538@2|Bacteria,1QY6D@1224|Proteobacteria,2UEKW@28211|Alphaproteobacteria,4BH1G@82115|Rhizobiaceae	28211|Alphaproteobacteria	S	SnoaL-like domain	-	-	-	-	-	-	-	-	-	-	-	-	SnoaL_2
DYD3_k127_6134269_33	862908.BMS_0267	1.326e-15	81.0	COG0810@1|root,COG1716@1|root,COG0810@2|Bacteria,COG1716@2|Bacteria,1NEW5@1224|Proteobacteria,42VUF@68525|delta/epsilon subdivisions,2MTK7@213481|Bdellovibrionales,2WRV9@28221|Deltaproteobacteria	213481|Bdellovibrionales	T	FHA domain	-	-	-	-	-	-	-	-	-	-	-	-	FHA,TonB_C,Yop-YscD_cpl
DYD3_k127_6134269_1	313590.MED134_07054	3.828e-139	463.0	COG0497@1|root,COG3593@1|root,COG0497@2|Bacteria,COG3593@2|Bacteria,4NSQA@976|Bacteroidetes	976|Bacteroidetes	L	ATP-dependent endonuclease of the OLD family	-	-	-	ko:K07459	-	-	-	-	ko00000	-	-	-	AAA_15
DYD3_k127_6134269_25	1144313.PMI10_01733	8.478e-40	164.0	28MDS@1|root,2ZARK@2|Bacteria,4PD3E@976|Bacteroidetes,1IDM5@117743|Flavobacteriia,2NYQV@237|Flavobacterium	976|Bacteroidetes	S	Domain of unknown function (DUF4145)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4145
DYD3_k127_6134269_0	1201290.M902_0589	2.881e-275	860.0	COG0143@1|root,COG0143@2|Bacteria,1MUBY@1224|Proteobacteria,42ZB0@68525|delta/epsilon subdivisions,2MTQ6@213481|Bdellovibrionales,2WUQM@28221|Deltaproteobacteria	213481|Bdellovibrionales	J	tRNA synthetases class I (M)	-	-	6.1.1.10	ko:K01874	ko00450,ko00970,map00450,map00970	M00359,M00360	R03659,R04773	RC00055,RC00523	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	-	-	-	Anticodon_1,tRNA-synt_1g
DYD3_k127_6134269_6	264462.Bd1141	1.05e-109	373.0	COG3420@1|root,COG3420@2|Bacteria,1R9ZI@1224|Proteobacteria	1224|Proteobacteria	P	Parallel beta-helix repeats	-	-	-	-	-	-	-	-	-	-	-	-	Beta_helix,NosD
DYD3_k127_6134269_21	1184267.A11Q_2042	5.013e-47	179.0	COG0597@1|root,COG0597@2|Bacteria,1Q97V@1224|Proteobacteria,437IK@68525|delta/epsilon subdivisions,2MTPV@213481|Bdellovibrionales,2X2S5@28221|Deltaproteobacteria	213481|Bdellovibrionales	MU	This protein specifically catalyzes the removal of signal peptides from prolipoproteins	-	-	3.4.23.36	ko:K03101	ko03060,map03060	-	-	-	ko00000,ko00001,ko01000,ko01002	-	-	-	Peptidase_A8
DYD3_k127_6134269_23	887062.HGR_02318	3.917e-45	166.0	COG0640@1|root,COG0640@2|Bacteria,1RH5P@1224|Proteobacteria,2VU68@28216|Betaproteobacteria,4AF78@80864|Comamonadaceae	28216|Betaproteobacteria	K	helix_turn_helix, Arsenical Resistance Operon Repressor	-	-	-	-	-	-	-	-	-	-	-	-	HTH_20
DYD3_k127_6134269_4	264462.Bd3667	3.588e-117	385.0	COG3832@1|root,COG3832@2|Bacteria,1N3W1@1224|Proteobacteria,430BD@68525|delta/epsilon subdivisions,2WVPP@28221|Deltaproteobacteria	28221|Deltaproteobacteria	S	Activator of Hsp90 ATPase homolog 1-like protein	-	-	-	-	-	-	-	-	-	-	-	-	AHSA1
DYD3_k127_6134269_12	1453498.LG45_00955	4.539e-81	278.0	COG0596@1|root,COG0596@2|Bacteria,4NJSG@976|Bacteroidetes,1I209@117743|Flavobacteriia,2NVAY@237|Flavobacterium	976|Bacteroidetes	S	Alpha beta	-	-	-	-	-	-	-	-	-	-	-	-	Abhydrolase_1,CarbopepD_reg_2
DYD3_k127_6134269_27	1160137.KB907307_gene648	4.572e-38	160.0	COG0308@1|root,COG0308@2|Bacteria,2HJ8E@201174|Actinobacteria,4G5T5@85025|Nocardiaceae	201174|Actinobacteria	E	aminopeptidase N	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_6134269_28	1395571.TMS3_0106305	1.113e-33	138.0	COG1296@1|root,COG1296@2|Bacteria,1MVGN@1224|Proteobacteria,1S85J@1236|Gammaproteobacteria	1236|Gammaproteobacteria	E	Branched-chain amino acid permease	-	-	-	-	-	-	-	-	-	-	-	-	AzlC
DYD3_k127_6134269_34	1322246.BN4_11918	9.769e-11	66.0	COG4392@1|root,COG4392@2|Bacteria,1NH6U@1224|Proteobacteria,437B5@68525|delta/epsilon subdivisions,2X2FW@28221|Deltaproteobacteria,2MDB6@213115|Desulfovibrionales	28221|Deltaproteobacteria	S	Branched-chain amino acid transport protein (AzlD)	-	-	-	-	-	-	-	-	-	-	-	-	AzlD
DYD3_k127_6134269_26	1519464.HY22_09990	9.401e-40	154.0	COG2095@1|root,COG2095@2|Bacteria	2|Bacteria	U	MarC family integral membrane protein	-	-	-	ko:K05595	-	-	-	-	ko00000,ko02000	2.A.95.1	-	-	MarC
DYD3_k127_6134269_14	1122603.ATVI01000006_gene290	1.046e-65	234.0	COG4798@1|root,COG4798@2|Bacteria,1NNHX@1224|Proteobacteria,1RN1A@1236|Gammaproteobacteria,1X3E7@135614|Xanthomonadales	135614|Xanthomonadales	S	Methyltransferase	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_6134269_3	1184267.A11Q_277	8.331e-118	396.0	COG0488@1|root,COG0488@2|Bacteria,1MU37@1224|Proteobacteria,42M2A@68525|delta/epsilon subdivisions,2MTKC@213481|Bdellovibrionales,2WIJY@28221|Deltaproteobacteria	213481|Bdellovibrionales	S	ABC transporter	-	-	-	-	-	-	-	-	-	-	-	-	ABC_tran
DYD3_k127_6134269_15	1184267.A11Q_263	2.476e-65	227.0	COG0563@1|root,COG0563@2|Bacteria,1N0HQ@1224|Proteobacteria,437MM@68525|delta/epsilon subdivisions,2MU50@213481|Bdellovibrionales,2X2VT@28221|Deltaproteobacteria	213481|Bdellovibrionales	F	AAA domain	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_6134269_35	247490.KSU1_D0038	5.952e-09	66.0	COG2202@1|root,COG4191@1|root,COG2202@2|Bacteria,COG4191@2|Bacteria,2J2QC@203682|Planctomycetes	203682|Planctomycetes	T	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain	-	-	-	-	-	-	-	-	-	-	-	-	HAMP,HATPase_c,HisKA,PAS,PAS_3,PAS_4
DYD3_k127_6134269_9	264462.Bd2387	3.445e-90	304.0	COG1234@1|root,COG1234@2|Bacteria,1Q2BQ@1224|Proteobacteria,430AM@68525|delta/epsilon subdivisions,2WVV1@28221|Deltaproteobacteria	28221|Deltaproteobacteria	S	Metal-dependent hydrolases of the beta-lactamase superfamily III	-	-	3.1.26.11	ko:K00784	ko03013,map03013	-	-	-	ko00000,ko00001,ko01000,ko03016	-	-	-	Lactamase_B_2
DYD3_k127_6134269_32	674977.VMC_41810	9.523e-18	96.0	COG1361@1|root,COG1361@2|Bacteria,1MUQC@1224|Proteobacteria,1T39T@1236|Gammaproteobacteria,1XUYV@135623|Vibrionales	135623|Vibrionales	M	Gametolysin peptidase M11	-	-	-	-	-	-	-	-	-	-	-	-	NPCBM_assoc,Peptidase_M11
DYD3_k127_6134269_20	1122599.AUGR01000004_gene2145	2.766e-49	180.0	COG3791@1|root,COG3791@2|Bacteria,1N0KM@1224|Proteobacteria,1SA6W@1236|Gammaproteobacteria,1XKHB@135619|Oceanospirillales	135619|Oceanospirillales	S	Glutathione-dependent formaldehyde-activating GFA	-	-	-	-	-	-	-	-	-	-	-	-	GFA
DYD3_k127_6134269_2	1501230.ET33_09200	5.83e-135	440.0	COG0477@1|root,COG2814@2|Bacteria,1TS0E@1239|Firmicutes,4HCEF@91061|Bacilli,26S5E@186822|Paenibacillaceae	91061|Bacilli	EGP	Permeases of the major facilitator superfamily	ydeR3	-	-	-	-	-	-	-	-	-	-	-	MFS_1,Sugar_tr
DYD3_k127_6134269_17	1003200.AXXA_20818	1.813e-57	203.0	COG1733@1|root,COG1733@2|Bacteria,1RIZT@1224|Proteobacteria,2VT1N@28216|Betaproteobacteria,3T4XN@506|Alcaligenaceae	28216|Betaproteobacteria	K	transcriptional	-	-	-	-	-	-	-	-	-	-	-	-	HxlR
DYD3_k127_6134269_22	502347.ESCAB7627_0205	1.824e-46	170.0	COG5507@1|root,COG5507@2|Bacteria,1RHC1@1224|Proteobacteria,1S6KT@1236|Gammaproteobacteria,3XPSZ@561|Escherichia	1236|Gammaproteobacteria	S	Protein of unknown function (DUF1428)	ybaA	-	-	-	-	-	-	-	-	-	-	-	DUF1428
DYD3_k127_6134269_10	1254432.SCE1572_14465	5.518e-89	321.0	COG0784@1|root,COG2202@1|root,COG5002@1|root,COG0784@2|Bacteria,COG2202@2|Bacteria,COG5002@2|Bacteria,1NC9X@1224|Proteobacteria,43BJQ@68525|delta/epsilon subdivisions,2X7N6@28221|Deltaproteobacteria,2Z2X1@29|Myxococcales	28221|Deltaproteobacteria	T	PAS fold	-	-	-	-	-	-	-	-	-	-	-	-	HATPase_c,HisKA,PAS_3,Response_reg
DYD3_k127_6134269_19	926549.KI421517_gene1227	2.31e-49	198.0	COG0642@1|root,COG3829@1|root,COG4251@1|root,COG2205@2|Bacteria,COG3829@2|Bacteria,COG4251@2|Bacteria,4NE3J@976|Bacteroidetes,47JYY@768503|Cytophagia	976|Bacteroidetes	T	signal transduction histidine kinase	-	-	-	-	-	-	-	-	-	-	-	-	GAF_2,HATPase_c,HisKA,PAS_3,PAS_4,PAS_9
DYD3_k127_6134269_5	1298867.AUES01000081_gene1931	6.489e-115	377.0	COG0451@1|root,COG0451@2|Bacteria,1MWYB@1224|Proteobacteria,2TSDE@28211|Alphaproteobacteria,3JY3E@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	GM	NAD(P)H-binding	-	-	-	-	-	-	-	-	-	-	-	-	Epimerase
DYD3_k127_6134269_13	1236959.BAMT01000020_gene735	1.267e-80	276.0	COG0693@1|root,COG0693@2|Bacteria,1MVTT@1224|Proteobacteria,2VKUH@28216|Betaproteobacteria,2KMGS@206350|Nitrosomonadales	206350|Nitrosomonadales	S	DJ-1/PfpI family	-	-	-	-	-	-	-	-	-	-	-	-	DJ-1_PfpI
DYD3_k127_6134269_18	384676.PSEEN2358	1.205e-52	197.0	COG0583@1|root,COG0583@2|Bacteria,1N663@1224|Proteobacteria,1S2IT@1236|Gammaproteobacteria	1236|Gammaproteobacteria	K	transcriptional regulator	-	-	-	-	-	-	-	-	-	-	-	-	HTH_1,LysR_substrate
DYD3_k127_6134269_11	404589.Anae109_3496	4.732e-86	302.0	COG0513@1|root,COG0513@2|Bacteria,1MU49@1224|Proteobacteria,42MGZ@68525|delta/epsilon subdivisions,2WIY6@28221|Deltaproteobacteria	28221|Deltaproteobacteria	L	Belongs to the DEAD box helicase family	rhlE	-	3.6.4.13	ko:K11927	ko03018,map03018	-	-	-	ko00000,ko00001,ko01000,ko03019	-	-	-	DEAD,Helicase_C
DYD3_k127_6134269_38	195250.CM001776_gene2985	0.0001193	46.0	COG0855@1|root,COG0855@2|Bacteria,1G1WA@1117|Cyanobacteria,1GYE0@1129|Synechococcus	1117|Cyanobacteria	H	Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)	ppk	-	2.7.4.1	ko:K00937	ko00190,ko03018,map00190,map03018	-	-	-	ko00000,ko00001,ko01000,ko03019	-	-	-	PP_kinase,PP_kinase_C,PP_kinase_N
DYD3_k127_6152798_13	1196323.ALKF01000168_gene514	6.715e-26	111.0	COG0540@1|root,COG0540@2|Bacteria,1TQ96@1239|Firmicutes,4H9M6@91061|Bacilli,26S1E@186822|Paenibacillaceae	91061|Bacilli	F	Belongs to the ATCase OTCase family	pyrB	GO:0003674,GO:0003824,GO:0004070,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006220,GO:0006221,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009165,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0016740,GO:0016741,GO:0016743,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576	2.1.3.2	ko:K00609	ko00240,ko00250,ko01100,map00240,map00250,map01100	M00051	R01397	RC00064,RC02850	ko00000,ko00001,ko00002,ko01000	-	-	iYO844.BSU15490	OTCace,OTCace_N
DYD3_k127_6152798_0	1353529.M899_0345	2.954e-309	960.0	COG0556@1|root,COG0556@2|Bacteria,1MUFK@1224|Proteobacteria,42MFA@68525|delta/epsilon subdivisions,2MSUZ@213481|Bdellovibrionales,2WJ20@28221|Deltaproteobacteria	213481|Bdellovibrionales	L	damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage	uvrB	-	-	ko:K03702	ko03420,map03420	-	-	-	ko00000,ko00001,ko03400	-	-	-	Helicase_C,ResIII,UVR,UvrB
DYD3_k127_6152798_4	862908.BMS_2173	3.901e-137	446.0	COG1407@1|root,COG1407@2|Bacteria,1R1V9@1224|Proteobacteria,43DBE@68525|delta/epsilon subdivisions,2MUSG@213481|Bdellovibrionales,2X6B2@28221|Deltaproteobacteria	213481|Bdellovibrionales	S	Calcineurin-like phosphoesterase	-	-	-	-	-	-	-	-	-	-	-	-	Metallophos
DYD3_k127_6152798_17	639282.DEFDS_P185	2.731e-06	53.0	COG2199@1|root,COG3706@2|Bacteria,2GFGI@200930|Deferribacteres	200930|Deferribacteres	T	cheY-homologous receiver domain	-	-	-	ko:K03413	ko02020,ko02030,map02020,map02030	M00506	-	-	ko00000,ko00001,ko00002,ko02022,ko02035	-	-	-	Response_reg
DYD3_k127_6152798_7	1201288.M900_1164	1.955e-104	346.0	COG1344@1|root,COG1344@2|Bacteria,1MV1N@1224|Proteobacteria,42MX8@68525|delta/epsilon subdivisions,2MTHE@213481|Bdellovibrionales,2WKE1@28221|Deltaproteobacteria	213481|Bdellovibrionales	N	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella	fliC	-	-	ko:K02406	ko02020,ko02040,ko04621,ko04626,ko05132,ko05134,map02020,map02040,map04621,map04626,map05132,map05134	-	-	-	ko00000,ko00001,ko02035	-	-	-	Flagellin_C,Flagellin_IN,Flagellin_N
DYD3_k127_6152798_12	933262.AXAM01000041_gene1894	8.807e-30	129.0	COG2267@1|root,COG2267@2|Bacteria,1MWF5@1224|Proteobacteria,42T8M@68525|delta/epsilon subdivisions,2WPBS@28221|Deltaproteobacteria,2MKKR@213118|Desulfobacterales	28221|Deltaproteobacteria	I	Alpha beta hydrolase	agmH	-	-	-	-	-	-	-	-	-	-	-	Hydrolase_4
DYD3_k127_6152798_2	1353529.M899_0693	1.099e-173	557.0	2C7MD@1|root,2ZYHD@2|Bacteria,1NVN7@1224|Proteobacteria,430EZ@68525|delta/epsilon subdivisions,2WW5C@28221|Deltaproteobacteria	28221|Deltaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_6152798_1	1201290.M902_2711	2.477e-210	663.0	COG1012@1|root,COG1012@2|Bacteria,1MU1V@1224|Proteobacteria,42N0C@68525|delta/epsilon subdivisions,2MUQC@213481|Bdellovibrionales,2WJQQ@28221|Deltaproteobacteria	213481|Bdellovibrionales	C	belongs to the aldehyde dehydrogenase family	-	-	1.2.1.8	ko:K00130	ko00260,ko01100,map00260,map01100	M00555	R02565,R02566	RC00080	ko00000,ko00001,ko00002,ko01000	-	-	-	Aldedh,Fe-ADH
DYD3_k127_6152798_3	862908.BMS_2005	3.049e-166	531.0	COG0183@1|root,COG0183@2|Bacteria,1MU5G@1224|Proteobacteria,42MSR@68525|delta/epsilon subdivisions,2WIXG@28221|Deltaproteobacteria	28221|Deltaproteobacteria	I	Belongs to the thiolase family	-	-	2.3.1.9	ko:K00626	ko00071,ko00072,ko00280,ko00310,ko00362,ko00380,ko00620,ko00630,ko00640,ko00650,ko00720,ko00900,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,ko02020,map00071,map00072,map00280,map00310,map00362,map00380,map00620,map00630,map00640,map00650,map00720,map00900,map01100,map01110,map01120,map01130,map01200,map01212,map02020	M00088,M00095,M00373,M00374,M00375	R00238,R01177	RC00004,RC00326	ko00000,ko00001,ko00002,ko01000,ko04147	-	-	-	Thiolase_C,Thiolase_N
DYD3_k127_6152798_16	649831.L083_3531	4.709e-08	66.0	COG3227@1|root,COG3227@2|Bacteria,2GN0P@201174|Actinobacteria,4D9AK@85008|Micromonosporales	201174|Actinobacteria	E	Fungalysin metallopeptidase (M36)	-	-	-	-	-	-	-	-	-	-	-	-	FTP,Peptidase_M36
DYD3_k127_6152798_14	1201290.M902_2709	8.251e-22	103.0	COG1250@1|root,COG1250@2|Bacteria	2|Bacteria	I	3-hydroxyacyl-CoA dehydrogenase	-	-	1.1.1.108,1.1.1.157	ko:K00074,ko:K17735	ko00360,ko00362,ko00650,ko01100,ko01120,map00360,map00362,map00650,map01100,map01120	-	R01976,R05576,R06941	RC00029,RC00117	ko00000,ko00001,ko01000	-	-	-	3HCDH,3HCDH_N,4HBT_2
DYD3_k127_6152798_8	1201290.M902_2708	2.383e-95	320.0	COG1250@1|root,COG1250@2|Bacteria,1MU9P@1224|Proteobacteria,42ZXS@68525|delta/epsilon subdivisions,2WV58@28221|Deltaproteobacteria	28221|Deltaproteobacteria	I	3-hydroxyacyl-CoA dehydrogenase, C-terminal domain	-	-	-	-	-	-	-	-	-	-	-	-	3HCDH,3HCDH_N
DYD3_k127_6152798_6	862908.BMS_2002	5.727e-113	370.0	COG3396@1|root,COG3396@2|Bacteria,1MVQ7@1224|Proteobacteria,43187@68525|delta/epsilon subdivisions,2WWG4@28221|Deltaproteobacteria	28221|Deltaproteobacteria	S	Phenylacetic acid catabolic protein	-	-	1.14.13.149	ko:K02609	ko00360,ko01120,map00360,map01120	-	R09838	RC02690	ko00000,ko00001,ko01000	-	-	-	PaaA_PaaC
DYD3_k127_6152798_9	862908.BMS_2001	1.04e-88	299.0	COG1024@1|root,COG1024@2|Bacteria,1MVQN@1224|Proteobacteria	1224|Proteobacteria	I	Enoyl-CoA hydratase	-	-	5.3.3.18	ko:K15866	ko00360,ko01120,map00360,map01120	-	R09837,R09839	RC00004,RC00326,RC02689,RC03003	ko00000,ko00001,ko01000	-	-	-	ECH_1
DYD3_k127_6152798_5	1201290.M902_2705	9.253e-116	377.0	COG1024@1|root,COG1024@2|Bacteria,1MWZC@1224|Proteobacteria,42QPM@68525|delta/epsilon subdivisions,2MSW9@213481|Bdellovibrionales,2WMRG@28221|Deltaproteobacteria	213481|Bdellovibrionales	I	Belongs to the enoyl-CoA hydratase isomerase family	-	-	4.2.1.17	ko:K01692,ko:K01715	ko00071,ko00280,ko00281,ko00310,ko00360,ko00362,ko00380,ko00410,ko00627,ko00640,ko00650,ko00903,ko00930,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00071,map00280,map00281,map00310,map00360,map00362,map00380,map00410,map00627,map00640,map00650,map00903,map00930,map01100,map01110,map01120,map01130,map01200,map01212	M00032,M00087	R03026,R03045,R04137,R04170,R04204,R04224,R04738,R04740,R04744,R04746,R04749,R05595,R06411,R06412,R06942,R08093	RC00831,RC00834,RC01086,RC01095,RC01098,RC01103,RC01217,RC02115	ko00000,ko00001,ko00002,ko01000	-	-	-	ECH_1
DYD3_k127_6152798_10	1173020.Cha6605_2667	5.947e-80	273.0	COG1117@1|root,COG1117@2|Bacteria,1G32U@1117|Cyanobacteria	1117|Cyanobacteria	P	Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system	pstB	-	3.6.3.27	ko:K02036	ko02010,map02010	M00222	-	-	ko00000,ko00001,ko00002,ko01000,ko02000	3.A.1.7	-	-	ABC_tran
DYD3_k127_6152798_11	1454004.AW11_02485	2.161e-55	197.0	COG1117@1|root,COG1117@2|Bacteria,1MU16@1224|Proteobacteria,2VI4J@28216|Betaproteobacteria	28216|Betaproteobacteria	P	Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system	-	-	-	-	-	-	-	-	-	-	-	-	ABC_tran
DYD3_k127_6187434_3	627192.SLG_39090	1.616e-42	156.0	COG1158@1|root,COG1158@2|Bacteria,1MUCF@1224|Proteobacteria,2TRB4@28211|Alphaproteobacteria,2K1UD@204457|Sphingomonadales	204457|Sphingomonadales	K	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template	rho	-	-	ko:K03628	ko03018,map03018	-	-	-	ko00000,ko00001,ko03019,ko03021	-	-	-	ATP-synt_ab,Rho_N,Rho_RNA_bind
DYD3_k127_6187434_2	1355368.JART01000002_gene2354	1.274e-51	204.0	28J7E@1|root,2Z92U@2|Bacteria,1NAE1@1224|Proteobacteria,42P08@68525|delta/epsilon subdivisions,2YNTD@29547|Epsilonproteobacteria	29547|Epsilonproteobacteria	S	Domain of unknown function (DUF4105)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4105
DYD3_k127_6187434_1	856793.MICA_1042	5.357e-56	199.0	COG2128@1|root,COG2128@2|Bacteria,1RD1K@1224|Proteobacteria,2U6ZZ@28211|Alphaproteobacteria,4BQM1@82117|unclassified Alphaproteobacteria	28211|Alphaproteobacteria	O	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity	-	-	-	-	-	-	-	-	-	-	-	-	CMD
DYD3_k127_6187434_0	1201288.M900_2211	5.443e-67	239.0	COG1595@1|root,COG1595@2|Bacteria,1MXVA@1224|Proteobacteria,42ZUS@68525|delta/epsilon subdivisions,2WVEB@28221|Deltaproteobacteria	28221|Deltaproteobacteria	K	Sigma-70, region 4	-	-	-	ko:K03088	-	-	-	-	ko00000,ko03021	-	-	-	Sigma70_r2,Sigma70_r4_2
DYD3_k127_6187434_4	1278073.MYSTI_07973	1.731e-32	135.0	COG0741@1|root,COG4219@1|root,COG0741@2|Bacteria,COG4219@2|Bacteria,1RAV1@1224|Proteobacteria	1224|Proteobacteria	KT	signal transduction N-terminal membrane component	-	-	-	-	-	-	-	-	-	-	-	-	Peptidase_M56,SLT
DYD3_k127_6188854_3	1201290.M902_0602	4.092e-51	191.0	COG1846@1|root,COG1846@2|Bacteria,1NYTK@1224|Proteobacteria,430N0@68525|delta/epsilon subdivisions,2WW1B@28221|Deltaproteobacteria	28221|Deltaproteobacteria	K	Domain of unknown function (DUF4423)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4423
DYD3_k127_6188854_5	1120936.KB907208_gene588	2.341e-14	83.0	COG3386@1|root,COG3386@2|Bacteria,2GNAZ@201174|Actinobacteria,4EGF0@85012|Streptosporangiales	201174|Actinobacteria	G	PFAM SMP-30 Gluconolaconase	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_6188854_4	932677.PAJ_0397	1.474e-22	113.0	COG3209@1|root,COG4104@1|root,COG3209@2|Bacteria,COG4104@2|Bacteria,1MVV1@1224|Proteobacteria,1SKYM@1236|Gammaproteobacteria,3VY8X@53335|Pantoea	1236|Gammaproteobacteria	M	RHS protein	-	-	-	-	-	-	-	-	-	-	-	-	PAAR_motif,RHS,RHS_repeat,Tox-HNH-EHHH
DYD3_k127_6188854_1	1353529.M899_1843	2.258e-97	324.0	COG3093@1|root,COG3093@2|Bacteria,1NZI9@1224|Proteobacteria,430I9@68525|delta/epsilon subdivisions,2WVYI@28221|Deltaproteobacteria	2|Bacteria	K	Domain of unknown function (DUF4423)	-	-	-	ko:K07110,ko:K21686	-	-	-	-	ko00000,ko03000	-	-	-	DUF2083,DUF4423,HTH_3,HTH_31,Peptidase_M78
DYD3_k127_6188854_0	448385.sce4763	2.279e-224	711.0	COG1297@1|root,COG1297@2|Bacteria,1N7SK@1224|Proteobacteria,42PMM@68525|delta/epsilon subdivisions,2X37C@28221|Deltaproteobacteria,2YUQZ@29|Myxococcales	28221|Deltaproteobacteria	S	OPT oligopeptide transporter protein	-	-	-	-	-	-	-	-	-	-	-	-	OPT
DYD3_k127_6191108_11	1206730.BAGA01000139_gene3361	1.115e-10	72.0	COG1403@1|root,COG1403@2|Bacteria	2|Bacteria	V	endonuclease activity	-	-	-	-	-	-	-	-	-	-	-	-	DUF222,HNH,HNH_5
DYD3_k127_6191108_2	1379698.RBG1_1C00001G1351	5.339e-141	456.0	COG0683@1|root,COG0683@2|Bacteria,2NPSN@2323|unclassified Bacteria	2|Bacteria	E	Receptor family ligand binding region	livJ	-	-	ko:K01999	ko02010,ko02024,map02010,map02024	M00237	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.4	-	-	Peripla_BP_6
DYD3_k127_6191108_3	765869.BDW_12520	4.168e-99	331.0	COG0559@1|root,COG0559@2|Bacteria,1MU25@1224|Proteobacteria,42NUE@68525|delta/epsilon subdivisions,2MSW5@213481|Bdellovibrionales,2WMSB@28221|Deltaproteobacteria	213481|Bdellovibrionales	E	Belongs to the binding-protein-dependent transport system permease family	-	-	-	ko:K01997	ko02010,ko02024,map02010,map02024	M00237	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.4	-	-	BPD_transp_2
DYD3_k127_6191108_5	1379698.RBG1_1C00001G1349	5.158e-79	275.0	COG4177@1|root,COG4177@2|Bacteria,2NPMP@2323|unclassified Bacteria	2|Bacteria	U	Branched-chain amino acid transport system / permease component	-	-	-	ko:K01995,ko:K01998	ko02010,ko02024,map02010,map02024	M00237	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.4	-	-	BPD_transp_2
DYD3_k127_6191108_4	568816.Acin_0137	3.121e-79	271.0	COG0411@1|root,COG0411@2|Bacteria,1TR0P@1239|Firmicutes,4H1WJ@909932|Negativicutes	909932|Negativicutes	E	ABC transporter	livG	-	-	ko:K01995	ko02010,ko02024,map02010,map02024	M00237	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.4	-	-	ABC_tran,BCA_ABC_TP_C
DYD3_k127_6191108_6	264462.Bd3389	2.713e-76	262.0	COG0410@1|root,COG0410@2|Bacteria,1MVVC@1224|Proteobacteria,42M9C@68525|delta/epsilon subdivisions,2MSWT@213481|Bdellovibrionales,2WJ75@28221|Deltaproteobacteria	213481|Bdellovibrionales	E	PFAM ABC transporter	-	-	-	ko:K01996	ko02010,ko02024,map02010,map02024	M00237	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.4	-	-	ABC_tran
DYD3_k127_6191108_0	926559.JoomaDRAFT_2600	1.519e-162	521.0	COG3876@1|root,COG3876@2|Bacteria,4NKHR@976|Bacteroidetes,1HZYR@117743|Flavobacteriia	976|Bacteroidetes	S	Protein of unknown function (DUF1343)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1343
DYD3_k127_6191108_1	856793.MICA_406	3.095e-144	460.0	COG0207@1|root,COG0207@2|Bacteria,1MUBD@1224|Proteobacteria,2TQSB@28211|Alphaproteobacteria,4BPRE@82117|unclassified Alphaproteobacteria	28211|Alphaproteobacteria	F	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis	thyA	-	2.1.1.45	ko:K00560	ko00240,ko00670,ko01100,ko01523,map00240,map00670,map01100,map01523	M00053	R02101	RC00219,RC00332	ko00000,ko00001,ko00002,ko01000	-	-	-	Thymidylat_synt
DYD3_k127_6191108_7	1353529.M899_1752	1.385e-44	167.0	COG0262@1|root,COG0262@2|Bacteria,1RH0P@1224|Proteobacteria,42UMS@68525|delta/epsilon subdivisions,2MT9S@213481|Bdellovibrionales,2WQA3@28221|Deltaproteobacteria	213481|Bdellovibrionales	H	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis	folA	-	1.5.1.3	ko:K00287,ko:K18589	ko00670,ko00790,ko01100,ko01523,map00670,map00790,map01100,map01523	M00126,M00840	R00936,R00937,R00939,R00940,R02235,R02236,R11765	RC00109,RC00110,RC00158	br01600,ko00000,ko00001,ko00002,ko01000,ko01504	-	-	-	DHFR_1
DYD3_k127_6191108_9	1120963.KB894515_gene352	3.628e-21	105.0	2C5PI@1|root,333MN@2|Bacteria,1R6UK@1224|Proteobacteria,1RYYP@1236|Gammaproteobacteria	1236|Gammaproteobacteria	S	Transglutaminase elicitor	-	-	-	-	-	-	-	-	-	-	-	-	Ricin_B_lectin,TGase_elicitor
DYD3_k127_6191108_8	349521.HCH_01209	4.277e-31	136.0	COG1404@1|root,COG1404@2|Bacteria	2|Bacteria	O	Belongs to the peptidase S8 family	-	-	-	-	-	-	-	-	-	-	-	-	CotH,LTD,Peptidase_M43,Peptidase_S8,SLH
DYD3_k127_6191108_10	1353529.M899_3333	2.762e-11	76.0	28MYV@1|root,2ZB5P@2|Bacteria,1NJ98@1224|Proteobacteria	1224|Proteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_6225086_1	862908.BMS_0263	2.269e-109	370.0	COG0457@1|root,COG0457@2|Bacteria,1P0DI@1224|Proteobacteria,431RN@68525|delta/epsilon subdivisions,2MUHA@213481|Bdellovibrionales,2WWCP@28221|Deltaproteobacteria	213481|Bdellovibrionales	S	Tetratricopeptide repeat	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_6225086_0	862908.BMS_0264	1.987e-180	599.0	COG0457@1|root,COG0457@2|Bacteria,1QX0H@1224|Proteobacteria,43C18@68525|delta/epsilon subdivisions,2MTRH@213481|Bdellovibrionales,2X7BW@28221|Deltaproteobacteria	213481|Bdellovibrionales	S	Tetratricopeptide repeat	-	-	-	-	-	-	-	-	-	-	-	-	TPR_16,TPR_6,TPR_7
DYD3_k127_6225086_3	862908.BMS_0265	7.244e-23	104.0	COG0457@1|root,COG0457@2|Bacteria	862908.BMS_0265|-	S	peptidyl-tyrosine sulfation	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_623514_6	448385.sce7688	7.592e-79	282.0	COG0515@1|root,COG0642@1|root,COG3899@1|root,COG0515@2|Bacteria,COG2205@2|Bacteria,COG3899@2|Bacteria,1NRP8@1224|Proteobacteria	1224|Proteobacteria	T	Histidine kinase	-	-	-	-	-	-	-	-	-	-	-	-	AAA_16,GAF,GAF_2,HATPase_c,HisKA,PAS_4,PAS_9,Pkinase,Response_reg
DYD3_k127_623514_4	414684.RC1_2752	2.976e-82	281.0	COG4798@1|root,COG4798@2|Bacteria,1RHGZ@1224|Proteobacteria,2U7R8@28211|Alphaproteobacteria,2JUQC@204441|Rhodospirillales	204441|Rhodospirillales	S	Methyltransferase	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_623514_3	926549.KI421517_gene2167	6.087e-96	327.0	COG0477@1|root,COG2814@2|Bacteria,4NFRE@976|Bacteroidetes,47M1S@768503|Cytophagia	976|Bacteroidetes	EGP	Transmembrane secretion effector	-	-	-	-	-	-	-	-	-	-	-	-	MFS_1,MFS_3
DYD3_k127_623514_10	118168.MC7420_5560	1.01e-15	90.0	COG2170@1|root,COG2170@2|Bacteria,1G1YE@1117|Cyanobacteria	1117|Cyanobacteria	S	Glutamate-cysteine ligase family 2(GCS2)	-	-	-	ko:K06048	-	-	-	-	ko00000,ko01000	-	-	-	GCS2
DYD3_k127_623514_8	509635.N824_20700	5.888e-38	147.0	COG2259@1|root,COG2259@2|Bacteria,4NYPC@976|Bacteroidetes,1IZT9@117747|Sphingobacteriia	976|Bacteroidetes	S	SURF4 family	-	-	-	ko:K15977	-	-	-	-	ko00000	-	-	-	DoxX,SURF4
DYD3_k127_623514_7	1242864.D187_001059	1.845e-70	243.0	COG0386@1|root,COG0386@2|Bacteria,1RD1R@1224|Proteobacteria,42ZSE@68525|delta/epsilon subdivisions,2WUWZ@28221|Deltaproteobacteria	28221|Deltaproteobacteria	O	Glutathione peroxidase	-	-	1.11.1.9	ko:K00432	ko00480,ko00590,ko04918,map00480,map00590,map04918	-	R00274,R07034,R07035	RC00011,RC00982	ko00000,ko00001,ko01000	-	-	-	GSHPx
DYD3_k127_623514_5	1144275.COCOR_03260	4.924e-79	287.0	COG3829@1|root,COG5002@1|root,COG3829@2|Bacteria,COG5002@2|Bacteria,1R5EN@1224|Proteobacteria,43CU3@68525|delta/epsilon subdivisions,2X81P@28221|Deltaproteobacteria	28221|Deltaproteobacteria	T	His Kinase A (phosphoacceptor) domain	-	-	-	-	-	-	-	-	-	-	-	-	GAF_2,HATPase_c,HisKA,PAS_4
DYD3_k127_623514_0	1201288.M900_0316	7.26e-180	570.0	COG0079@1|root,COG0079@2|Bacteria,1MW7I@1224|Proteobacteria,42NCH@68525|delta/epsilon subdivisions,2MSXE@213481|Bdellovibrionales,2WJDR@28221|Deltaproteobacteria	213481|Bdellovibrionales	E	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily	hisC	-	2.6.1.9	ko:K00817	ko00340,ko00350,ko00360,ko00400,ko00401,ko00960,ko01100,ko01110,ko01130,ko01230,map00340,map00350,map00360,map00400,map00401,map00960,map01100,map01110,map01130,map01230	M00026	R00694,R00734,R03243	RC00006,RC00888	ko00000,ko00001,ko00002,ko01000,ko01007	-	-	-	Aminotran_1_2
DYD3_k127_623514_2	1353529.M899_1523	5.856e-129	420.0	COG0179@1|root,COG0179@2|Bacteria,1MUPF@1224|Proteobacteria,42NS5@68525|delta/epsilon subdivisions,2MT9M@213481|Bdellovibrionales,2WNQ5@28221|Deltaproteobacteria	213481|Bdellovibrionales	Q	PFAM fumarylacetoacetate (FAA) hydrolase	-	-	-	-	-	-	-	-	-	-	-	-	FAA_hydrolase
DYD3_k127_623514_1	1201288.M900_0314	1.198e-179	568.0	COG3508@1|root,COG3508@2|Bacteria,1MV9G@1224|Proteobacteria,42U01@68525|delta/epsilon subdivisions,2MTJS@213481|Bdellovibrionales,2WQQ3@28221|Deltaproteobacteria	213481|Bdellovibrionales	C	Homogentisate 12-dioxygenase	hgo	-	1.13.11.5	ko:K00451	ko00350,ko00643,ko01100,ko01120,map00350,map00643,map01100,map01120	M00044	R02519	RC00737	ko00000,ko00001,ko00002,ko01000	-	-	-	HgmA
DYD3_k127_623514_12	395495.Lcho_2636	9.376e-06	56.0	2ABSM@1|root,31194@2|Bacteria,1RDYC@1224|Proteobacteria,2VR7K@28216|Betaproteobacteria	28216|Betaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_623514_9	877415.JNJQ01000001_gene1925	6.522e-21	103.0	COG2220@1|root,COG2220@2|Bacteria,1VUFD@1239|Firmicutes	1239|Firmicutes	S	Metallo-beta-lactamase superfamily	-	-	-	-	-	-	-	-	-	-	-	-	Lactamase_B_2
DYD3_k127_623514_11	1353529.M899_1525	4.83e-15	76.0	COG1853@1|root,COG1853@2|Bacteria,1MUPP@1224|Proteobacteria,42WKT@68525|delta/epsilon subdivisions,2WSH7@28221|Deltaproteobacteria	28221|Deltaproteobacteria	S	Flavin reductase like domain	-	-	-	-	-	-	-	-	-	-	-	-	Flavin_Reduct
DYD3_k127_6249215_6	1340493.JNIF01000003_gene1468	1.719e-63	229.0	COG3481@1|root,COG3481@2|Bacteria,3Y38F@57723|Acidobacteria	57723|Acidobacteria	S	nucleic acid binding	-	-	-	ko:K03698	-	-	-	-	ko00000,ko01000,ko03019	-	-	-	HD,tRNA_anti-codon
DYD3_k127_6249215_2	1353529.M899_1244	2.432e-141	458.0	COG0057@1|root,COG0057@2|Bacteria,1MU93@1224|Proteobacteria,42N9Q@68525|delta/epsilon subdivisions,2MST6@213481|Bdellovibrionales,2WIK1@28221|Deltaproteobacteria	213481|Bdellovibrionales	G	Belongs to the glyceraldehyde-3-phosphate dehydrogenase family	gap	-	1.2.1.12	ko:K00134	ko00010,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04066,ko05010,map00010,map00710,map01100,map01110,map01120,map01130,map01200,map01230,map04066,map05010	M00001,M00002,M00003,M00165,M00166,M00308,M00552	R01061	RC00149	ko00000,ko00001,ko00002,ko01000,ko04131,ko04147	-	-	-	Gp_dh_C,Gp_dh_N
DYD3_k127_6249215_0	1201290.M902_0523	1.158e-159	511.0	COG0126@1|root,COG0126@2|Bacteria,1MUNU@1224|Proteobacteria,42N4P@68525|delta/epsilon subdivisions,2MSTV@213481|Bdellovibrionales,2WJ0B@28221|Deltaproteobacteria	213481|Bdellovibrionales	F	Belongs to the phosphoglycerate kinase family	pgk	-	2.7.2.3	ko:K00927	ko00010,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00710,map01100,map01110,map01120,map01130,map01200,map01230	M00001,M00002,M00003,M00165,M00166,M00308,M00552	R01512	RC00002,RC00043	ko00000,ko00001,ko00002,ko01000,ko04147	-	-	-	PGK
DYD3_k127_6249215_4	862908.BMS_2885	8.595e-71	246.0	COG0149@1|root,COG0149@2|Bacteria,1MWK5@1224|Proteobacteria,42MIF@68525|delta/epsilon subdivisions,2MT0F@213481|Bdellovibrionales,2WIQF@28221|Deltaproteobacteria	213481|Bdellovibrionales	G	Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P)	tpiA	-	5.3.1.1	ko:K01803	ko00010,ko00051,ko00562,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00051,map00562,map00710,map01100,map01110,map01120,map01130,map01200,map01230	M00001,M00002,M00003	R01015	RC00423	ko00000,ko00001,ko00002,ko01000,ko04147	-	-	-	TIM
DYD3_k127_6249215_10	879212.DespoDRAFT_01093	9.422e-13	74.0	COG1314@1|root,COG1314@2|Bacteria,1NJ1D@1224|Proteobacteria,42TKW@68525|delta/epsilon subdivisions,2WRA3@28221|Deltaproteobacteria,2MKYR@213118|Desulfobacterales	28221|Deltaproteobacteria	U	PFAM Preprotein translocase SecG subunit	secG	-	-	ko:K03075	ko02024,ko03060,ko03070,map02024,map03060,map03070	M00335	-	-	ko00000,ko00001,ko00002,ko02044	3.A.5.1,3.A.5.2	-	-	SecG
DYD3_k127_6249215_3	862908.BMS_2887	1.297e-123	407.0	COG2206@1|root,COG2206@2|Bacteria,1MW7F@1224|Proteobacteria,42PGR@68525|delta/epsilon subdivisions,2MT2U@213481|Bdellovibrionales,2X5DV@28221|Deltaproteobacteria	213481|Bdellovibrionales	T	HD domain	-	-	-	-	-	-	-	-	-	-	-	-	HD,HD_5
DYD3_k127_6249215_7	622637.KE124774_gene1345	3.832e-59	213.0	COG0693@1|root,COG0693@2|Bacteria,1N8N6@1224|Proteobacteria,2TT0U@28211|Alphaproteobacteria,3700V@31993|Methylocystaceae	28211|Alphaproteobacteria	S	DJ-1/PfpI family	-	-	4.2.1.103	ko:K18199	ko00930,map00930	-	R05771	RC01467	ko00000,ko00001,ko01000,ko01002	-	-	-	DJ-1_PfpI
DYD3_k127_6249215_5	1158294.JOMI01000001_gene1638	9.019e-64	231.0	COG4977@1|root,COG4977@2|Bacteria,4NGSR@976|Bacteroidetes,2FRSG@200643|Bacteroidia	976|Bacteroidetes	K	DJ-1/PfpI family	-	-	-	-	-	-	-	-	-	-	-	-	DJ-1_PfpI,HTH_18
DYD3_k127_6249215_9	1341181.FLJC2902T_06540	6.069e-55	197.0	COG1670@1|root,COG1670@2|Bacteria,4NMB7@976|Bacteroidetes,1II65@117743|Flavobacteriia,2P0AY@237|Flavobacterium	976|Bacteroidetes	J	Acetyltransferase (GNAT) domain	-	-	-	-	-	-	-	-	-	-	-	-	Acetyltransf_3
DYD3_k127_6249215_8	1201290.M902_0750	4.505e-59	211.0	COG2808@1|root,COG2808@2|Bacteria,1N1B9@1224|Proteobacteria,42WNY@68525|delta/epsilon subdivisions,2MUJQ@213481|Bdellovibrionales,2WRMA@28221|Deltaproteobacteria	213481|Bdellovibrionales	K	Putative FMN-binding domain	paiB	-	-	ko:K07734	-	-	-	-	ko00000,ko03000	-	-	-	FMN_bind_2
DYD3_k127_6249215_1	936136.ARRT01000006_gene4129	1.9e-150	488.0	COG1167@1|root,COG1167@2|Bacteria,1MVGT@1224|Proteobacteria,2TRK7@28211|Alphaproteobacteria,4B9X4@82115|Rhizobiaceae	28211|Alphaproteobacteria	K	Aminotransferase class I and II	-	-	-	ko:K00375	-	-	-	-	ko00000,ko03000	-	-	-	Aminotran_1_2,GntR
DYD3_k127_6270308_4	1173027.Mic7113_3888	9.948e-137	439.0	COG0596@1|root,COG0596@2|Bacteria,1G21Y@1117|Cyanobacteria,1H751@1150|Oscillatoriales	1117|Cyanobacteria	S	Belongs to the peptidase S33 family	pip	-	3.4.11.5	ko:K01259	ko00330,map00330	-	R00135	-	ko00000,ko00001,ko01000,ko01002	-	-	-	Abhydrolase_1
DYD3_k127_6270308_6	1230343.CANP01000008_gene775	1.686e-96	333.0	COG1073@1|root,COG1073@2|Bacteria,1NSQP@1224|Proteobacteria,1STMI@1236|Gammaproteobacteria,1JC7I@118969|Legionellales	118969|Legionellales	M	Serine carboxypeptidase S28	-	-	-	-	-	-	-	-	-	-	-	-	Peptidase_S28
DYD3_k127_6270308_3	1201290.M902_1903	9.213e-145	480.0	COG1502@1|root,COG1502@2|Bacteria	2|Bacteria	I	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol	nuc	-	3.1.4.4	ko:K06131,ko:K17717	ko00564,ko00565,ko01100,ko01110,map00564,map00565,map01100,map01110	-	R01310,R02051,R07385,R07390	RC00017,RC00425	ko00000,ko00001,ko01000	-	-	-	PLDc_2
DYD3_k127_6270308_10	765869.BDW_12395	3.138e-46	188.0	2CEDM@1|root,33Q8F@2|Bacteria,1NRHV@1224|Proteobacteria,42YN3@68525|delta/epsilon subdivisions,2MTGK@213481|Bdellovibrionales,2WTIG@28221|Deltaproteobacteria	213481|Bdellovibrionales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_6270308_7	1353529.M899_3417	1.305e-59	217.0	COG0810@1|root,COG0810@2|Bacteria,1NG3C@1224|Proteobacteria,42V3M@68525|delta/epsilon subdivisions,2MT5S@213481|Bdellovibrionales,2WS05@28221|Deltaproteobacteria	213481|Bdellovibrionales	M	TonB C terminal	-	-	-	ko:K03832	-	-	-	-	ko00000,ko02000	2.C.1.1	-	-	TonB_2,TonB_C
DYD3_k127_6270308_16	1027273.GZ77_15835	1.178e-12	71.0	COG5433@1|root,COG5433@2|Bacteria,1MXI8@1224|Proteobacteria,1SP0E@1236|Gammaproteobacteria	1224|Proteobacteria	L	Pfam Transposase	-	-	-	-	-	-	-	-	-	-	-	-	DDE_Tnp_1
DYD3_k127_6270308_14	1173024.KI912151_gene2022	4.086e-31	136.0	COG2234@1|root,COG2234@2|Bacteria	2|Bacteria	DZ	aminopeptidase activity	-	-	-	-	-	-	-	-	-	-	-	-	Peptidase_M28
DYD3_k127_6270308_2	1444711.CCJF01000004_gene2121	4.705e-182	576.0	COG1063@1|root,COG1063@2|Bacteria,2JGMY@204428|Chlamydiae	204428|Chlamydiae	E	Alcohol dehydrogenase GroES-associated	-	-	-	-	-	-	-	-	-	-	-	-	ADH_N,ADH_N_assoc,ADH_zinc_N
DYD3_k127_6270308_17	373903.Hore_22620	2.582e-12	71.0	COG0745@1|root,COG0745@2|Bacteria,1V9RJ@1239|Firmicutes,24PV6@186801|Clostridia,3WBS9@53433|Halanaerobiales	186801|Clostridia	T	cheY-homologous receiver domain	-	-	-	ko:K03413	ko02020,ko02030,map02020,map02030	M00506	-	-	ko00000,ko00001,ko00002,ko02022,ko02035	-	-	-	Response_reg
DYD3_k127_6270308_1	215803.DB30_8173	2.159e-199	636.0	COG1966@1|root,COG1966@2|Bacteria,1MWF9@1224|Proteobacteria,42NBI@68525|delta/epsilon subdivisions,2WM33@28221|Deltaproteobacteria,2YUS1@29|Myxococcales	28221|Deltaproteobacteria	T	Carbon starvation protein	cstA	-	-	ko:K06200	-	-	-	-	ko00000	-	-	-	CstA,CstA_5TM
DYD3_k127_6270308_9	264462.Bd3241	1.865e-58	211.0	COG1913@1|root,COG1913@2|Bacteria,1N88E@1224|Proteobacteria,42VD8@68525|delta/epsilon subdivisions,2MU0Y@213481|Bdellovibrionales,2WR9R@28221|Deltaproteobacteria	213481|Bdellovibrionales	S	metallopeptidase activity	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_6270308_11	862908.BMS_2882	2.849e-40	160.0	COG3319@1|root,COG3319@2|Bacteria	2|Bacteria	Q	amino acid activation for nonribosomal peptide biosynthetic process	-	-	-	-	-	-	-	-	-	-	-	-	PP-binding,Thioesterase,ketoacyl-synt
DYD3_k127_6270308_5	1122176.KB903569_gene3495	7.298e-110	369.0	COG2931@1|root,COG3291@1|root,COG3591@1|root,COG2931@2|Bacteria,COG3291@2|Bacteria,COG3591@2|Bacteria,4NG2K@976|Bacteroidetes,1IY1U@117747|Sphingobacteriia	976|Bacteroidetes	E	Belongs to the peptidase S1B family	-	-	3.4.21.50	ko:K01337	-	-	-	-	ko00000,ko01000,ko01002	-	-	-	P_proprotein,Trypsin_2
DYD3_k127_6270308_13	765869.BDW_05865	2.929e-32	138.0	2BVGQ@1|root,32QVH@2|Bacteria,1NI75@1224|Proteobacteria,42WY2@68525|delta/epsilon subdivisions,2MUDB@213481|Bdellovibrionales,2WSQZ@28221|Deltaproteobacteria	213481|Bdellovibrionales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_6270308_19	525904.Tter_1285	4.577e-05	51.0	COG1846@1|root,COG1846@2|Bacteria	2|Bacteria	K	DNA-binding transcription factor activity	yfiV	GO:0001067,GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0006355,GO:0008150,GO:0009889,GO:0010468,GO:0010556,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0044212,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:1901363,GO:1903506,GO:2000112,GO:2001141	-	-	-	-	-	-	-	-	-	-	MarR,MarR_2
DYD3_k127_6270308_12	264462.Bd0887	4.095e-40	164.0	COG1538@1|root,COG1538@2|Bacteria,1Q8XW@1224|Proteobacteria,43EZ7@68525|delta/epsilon subdivisions,2MT8A@213481|Bdellovibrionales,2X2QE@28221|Deltaproteobacteria	213481|Bdellovibrionales	MU	Outer membrane efflux protein	-	-	-	ko:K12340	ko01501,ko01503,ko02020,ko03070,ko04626,ko05133,map01501,map01503,map02020,map03070,map04626,map05133	M00325,M00326,M00339,M00571,M00575,M00646,M00647,M00696,M00697,M00709,M00720,M00821	-	-	ko00000,ko00001,ko00002,ko01504,ko02000,ko02044	1.B.17,2.A.6.2	-	-	OEP
DYD3_k127_6270308_0	264462.Bd0888	0.0	1052.0	COG0841@1|root,COG0841@2|Bacteria,1MU48@1224|Proteobacteria,42MF6@68525|delta/epsilon subdivisions,2MSRN@213481|Bdellovibrionales,2WJ8D@28221|Deltaproteobacteria	213481|Bdellovibrionales	V	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family	-	-	-	ko:K03296	-	-	-	-	ko00000	2.A.6.2	-	-	ACR_tran
DYD3_k127_6270308_15	1121918.ARWE01000001_gene1470	1.919e-22	99.0	COG1872@1|root,COG1872@2|Bacteria,1MZ4E@1224|Proteobacteria,42VE5@68525|delta/epsilon subdivisions,2WR8T@28221|Deltaproteobacteria	28221|Deltaproteobacteria	S	Belongs to the UPF0235 family	-	-	-	ko:K09131	-	-	-	-	ko00000	-	-	-	DUF167
DYD3_k127_6270308_8	1201288.M900_A0454	1.949e-59	218.0	COG3591@1|root,COG3591@2|Bacteria,1NP6U@1224|Proteobacteria,42ZKY@68525|delta/epsilon subdivisions,2MTXG@213481|Bdellovibrionales,2WUS6@28221|Deltaproteobacteria	213481|Bdellovibrionales	E	Belongs to the peptidase S1B family	-	-	-	-	-	-	-	-	-	-	-	-	Trypsin_2
DYD3_k127_6272039_0	1353529.M899_1145	2.402e-103	347.0	COG2256@1|root,COG2256@2|Bacteria,1MUVS@1224|Proteobacteria,42M9X@68525|delta/epsilon subdivisions,2MSQF@213481|Bdellovibrionales,2WJ7E@28221|Deltaproteobacteria	213481|Bdellovibrionales	L	AAA ATPase, central domain protein	rarA	-	-	ko:K07478	-	-	-	-	ko00000	-	-	-	AAA,AAA_assoc_2,MgsA_C,RuvB_N
DYD3_k127_6272039_2	264462.Bd0331	4.343e-85	294.0	COG3424@1|root,COG3424@2|Bacteria,1MUDX@1224|Proteobacteria,42UCQ@68525|delta/epsilon subdivisions,2MUIM@213481|Bdellovibrionales,2WQ17@28221|Deltaproteobacteria	213481|Bdellovibrionales	Q	chalcone and stilbene synthase domain protein	-	-	-	-	-	-	-	-	-	-	-	-	Chal_sti_synt_C,Chal_sti_synt_N,FAE1_CUT1_RppA
DYD3_k127_6272039_4	264462.Bd0330	8.84e-25	108.0	2FF9B@1|root,34775@2|Bacteria	2|Bacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_6272039_3	264462.Bd3625	1.625e-76	266.0	COG2227@1|root,COG2227@2|Bacteria,1PEUM@1224|Proteobacteria,42VXF@68525|delta/epsilon subdivisions,2MUGQ@213481|Bdellovibrionales,2X20Q@28221|Deltaproteobacteria	213481|Bdellovibrionales	H	Methionine biosynthesis protein MetW	-	-	2.1.1.222,2.1.1.64	ko:K00568	ko00130,ko01100,ko01110,map00130,map01100,map01110	M00117	R04988,R05614,R08769,R08781	RC00003,RC00392,RC01895	ko00000,ko00001,ko00002,ko01000	-	-	-	-
DYD3_k127_6310980_0	1201290.M902_1482	2.003e-92	309.0	COG1216@1|root,COG1216@2|Bacteria,1QX3U@1224|Proteobacteria,42RP8@68525|delta/epsilon subdivisions,2MSXZ@213481|Bdellovibrionales,2WNF5@28221|Deltaproteobacteria	213481|Bdellovibrionales	S	Glycosyl transferase family 2	-	-	2.4.1.83	ko:K00721	ko00510,ko01100,map00510,map01100	-	R01009	RC00005	ko00000,ko00001,ko01000,ko01003	-	GT2	-	Glycos_transf_2
DYD3_k127_6310980_2	485918.Cpin_1026	8.725e-75	268.0	COG1807@1|root,COG1807@2|Bacteria,4NEU7@976|Bacteroidetes,1IR4N@117747|Sphingobacteriia	976|Bacteroidetes	M	4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferase of PMT family	-	-	-	-	-	-	-	-	-	-	-	-	PMT_2
DYD3_k127_6310980_3	1353529.M899_0057	8.167e-60	210.0	COG0590@1|root,COG0590@2|Bacteria,1RGU0@1224|Proteobacteria,42TVP@68525|delta/epsilon subdivisions,2MT5V@213481|Bdellovibrionales,2WQ7U@28221|Deltaproteobacteria	213481|Bdellovibrionales	FJ	Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2)	tadA	-	3.5.4.33	ko:K11991	-	-	R10223	RC00477	ko00000,ko01000,ko03016	-	-	-	MafB19-deam
DYD3_k127_6310980_6	231434.JQJH01000006_gene139	1.378e-06	53.0	COG1961@1|root,COG1961@2|Bacteria,1MWCZ@1224|Proteobacteria,2TRIY@28211|Alphaproteobacteria,3NC6I@45404|Beijerinckiaceae	28211|Alphaproteobacteria	L	Recombinase zinc beta ribbon domain	-	-	-	-	-	-	-	-	-	-	-	-	Recombinase,Resolvase,Zn_ribbon_recom
DYD3_k127_6310980_1	1229172.JQFA01000005_gene267	5.259e-75	284.0	COG0642@1|root,COG2205@2|Bacteria,1G09B@1117|Cyanobacteria,1H7M4@1150|Oscillatoriales	1117|Cyanobacteria	T	Signal transduction histidine kinase, subgroup 1, dimerisation phosphoacceptor domain	-	-	-	-	-	-	-	-	-	-	-	-	HATPase_c,HisKA,PAS,PAS_3,PAS_4,PAS_9,Response_reg
DYD3_k127_6310980_5	1121106.JQKB01000007_gene1110	8.436e-17	88.0	2EX4W@1|root,33QFX@2|Bacteria,1NRWJ@1224|Proteobacteria,2UNPH@28211|Alphaproteobacteria,2JVSM@204441|Rhodospirillales	204441|Rhodospirillales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_6311828_5	172045.KS04_03795	3.963e-10	63.0	COG0598@1|root,COG0598@2|Bacteria,4NG3C@976|Bacteroidetes,1HXRX@117743|Flavobacteriia,34PQV@308865|Elizabethkingia	976|Bacteroidetes	P	CorA-like Mg2+ transporter protein	corA	-	-	ko:K03284	-	-	-	-	ko00000,ko02000	1.A.35.1,1.A.35.3	-	-	CorA
DYD3_k127_6311828_7	330779.Saci_2021	0.0008754	49.0	COG5607@1|root,arCOG07254@2157|Archaea	2157|Archaea	S	CHAD	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_6311828_0	395493.BegalDRAFT_1234	5.84e-112	370.0	COG2899@1|root,COG2899@2|Bacteria,1NURT@1224|Proteobacteria,1RQ9S@1236|Gammaproteobacteria,460FU@72273|Thiotrichales	72273|Thiotrichales	S	Protein of unknown function (DUF475)	-	-	-	ko:K09799	-	-	-	-	ko00000	-	-	-	DUF475
DYD3_k127_6311828_1	1003200.AXXA_26745	3.664e-100	331.0	COG0625@1|root,COG0625@2|Bacteria,1MUN3@1224|Proteobacteria,2VHCD@28216|Betaproteobacteria,3T2BC@506|Alcaligenaceae	28216|Betaproteobacteria	O	Belongs to the GST superfamily	-	-	2.5.1.18	ko:K00799,ko:K11209	ko00480,ko00980,ko00982,ko00983,ko01524,ko05200,ko05204,ko05225,ko05418,map00480,map00980,map00982,map00983,map01524,map05200,map05204,map05225,map05418	-	R03522,R07002,R07003,R07004,R07023,R07024,R07025,R07026,R07069,R07070,R07083,R07084,R07091,R07092,R07093,R07094,R07100,R07113,R07116,R08280,R09409,R11905	RC00004,RC00069,RC00840,RC00948,RC01704,RC01705,RC01706,RC01758,RC01759,RC01765,RC01767,RC01769,RC02243,RC02527,RC02939,RC02940,RC02942,RC02943,RC02944	ko00000,ko00001,ko01000,ko02000	1.A.12.2.2,1.A.12.3.2	-	-	GST_C,GST_N
DYD3_k127_6311828_3	929556.Solca_3965	5.434e-67	234.0	COG2761@1|root,COG2761@2|Bacteria,4NJ3N@976|Bacteroidetes,1IQYQ@117747|Sphingobacteriia	976|Bacteroidetes	Q	dithiol-disulfide isomerase involved in polyketide biosynthesis	-	-	-	-	-	-	-	-	-	-	-	-	DSBA
DYD3_k127_6311828_2	264462.Bd3668	2.539e-90	307.0	COG3102@1|root,COG5186@1|root,COG3102@2|Bacteria,COG5186@2|Bacteria,1NDNE@1224|Proteobacteria,42Z8I@68525|delta/epsilon subdivisions,2MTPJ@213481|Bdellovibrionales,2WTJA@28221|Deltaproteobacteria	213481|Bdellovibrionales	A	Domain of unknown function (DUF4269)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4269,YecM
DYD3_k127_6311828_4	1173024.KI912148_gene3266	3.094e-24	108.0	COG1670@1|root,COG1670@2|Bacteria,1G6AI@1117|Cyanobacteria	1117|Cyanobacteria	J	Acetyltransferase (GNAT) domain	-	-	-	-	-	-	-	-	-	-	-	-	Acetyltransf_3
DYD3_k127_6311828_6	290397.Adeh_2115	2.468e-06	57.0	COG1403@1|root,COG1403@2|Bacteria	2|Bacteria	V	endonuclease activity	-	-	-	ko:K07451	-	-	-	-	ko00000,ko01000,ko02048	-	-	-	HNH,HNH_4
DYD3_k127_6316871_0	765869.BDW_04005	9.819e-93	321.0	COG0840@1|root,COG0840@2|Bacteria,1MU9B@1224|Proteobacteria,42M22@68525|delta/epsilon subdivisions,2WM8F@28221|Deltaproteobacteria	28221|Deltaproteobacteria	NT	Chemotaxis sensory transducer	mcp64H-1	-	-	ko:K03406	ko02020,ko02030,map02020,map02030	-	-	-	ko00000,ko00001,ko02035	-	-	-	4HB_MCP_1,HAMP,MCPsignal,PAS_4,dCache_1
DYD3_k127_638466_0	862908.BMS_1379	6.367e-99	356.0	COG0457@1|root,COG0457@2|Bacteria	862908.BMS_1379|-	S	peptidyl-tyrosine sulfation	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_638466_1	862908.BMS_1380	1.135e-28	120.0	COG0848@1|root,COG0848@2|Bacteria	2|Bacteria	U	biopolymer transport protein	-	-	-	ko:K03559	-	-	-	-	ko00000,ko02000	1.A.30.2.1	-	-	ExbD
DYD3_k127_638466_2	1353529.M899_0397	3.429e-10	65.0	COG0848@1|root,COG0848@2|Bacteria,1N8FU@1224|Proteobacteria,42WU3@68525|delta/epsilon subdivisions,2MUMF@213481|Bdellovibrionales,2WSMD@28221|Deltaproteobacteria	213481|Bdellovibrionales	U	Biopolymer transport protein	-	-	-	-	-	-	-	-	-	-	-	-	ExbD
DYD3_k127_6409363_7	1133849.O3I_021710	7.268e-32	140.0	COG0308@1|root,COG0308@2|Bacteria,2HJ8E@201174|Actinobacteria,4G5T5@85025|Nocardiaceae	201174|Actinobacteria	E	aminopeptidase N	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_6409363_8	264462.Bd3246	2.453e-11	68.0	COG0597@1|root,COG0597@2|Bacteria,1Q97V@1224|Proteobacteria,437IK@68525|delta/epsilon subdivisions,2MTPV@213481|Bdellovibrionales,2X2S5@28221|Deltaproteobacteria	213481|Bdellovibrionales	MU	This protein specifically catalyzes the removal of signal peptides from prolipoproteins	-	-	3.4.23.36	ko:K03101	ko03060,map03060	-	-	-	ko00000,ko00001,ko01000,ko01002	-	-	-	Peptidase_A8
DYD3_k127_6409363_10	1121374.KB891575_gene1090	0.0004604	43.0	COG2755@1|root,COG2755@2|Bacteria,1MXTS@1224|Proteobacteria,1RTPH@1236|Gammaproteobacteria	1236|Gammaproteobacteria	E	Concanavalin A-like lectin/glucanases superfamily	-	-	-	-	-	-	-	-	-	-	-	-	Laminin_G_3
DYD3_k127_6409363_5	264462.Bd1657	5.112e-39	162.0	COG4191@1|root,COG4191@2|Bacteria,1RCM9@1224|Proteobacteria,42MC4@68525|delta/epsilon subdivisions,2MSXW@213481|Bdellovibrionales,2WIZU@28221|Deltaproteobacteria	213481|Bdellovibrionales	T	Histidine kinase A domain protein	-	-	-	-	-	-	-	-	-	-	-	-	ABC_sub_bind,HATPase_c,HisKA,PAS_3,PAS_4,PAS_9,Response_reg
DYD3_k127_6409363_3	378806.STAUR_0856	8.987e-66	249.0	COG0784@1|root,COG5002@1|root,COG0784@2|Bacteria,COG5002@2|Bacteria,1QAHN@1224|Proteobacteria,439XB@68525|delta/epsilon subdivisions,2X1UH@28221|Deltaproteobacteria,2YWI1@29|Myxococcales	28221|Deltaproteobacteria	T	PAS fold	-	-	-	-	-	-	-	-	-	-	-	-	HATPase_c,HisKA,PAS_3,Response_reg
DYD3_k127_6409363_1	1353529.M899_2200	1.674e-209	660.0	COG0188@1|root,COG0188@2|Bacteria,1MUGG@1224|Proteobacteria,42KZ9@68525|delta/epsilon subdivisions,2MSQ5@213481|Bdellovibrionales,2WJBC@28221|Deltaproteobacteria	213481|Bdellovibrionales	L	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner	-	-	5.99.1.3	ko:K02469	-	-	-	-	ko00000,ko01000,ko03032,ko03400	-	-	-	DNA_topoisoIV
DYD3_k127_6409363_0	1353529.M899_2201	1.156e-307	956.0	COG0187@1|root,COG0187@2|Bacteria,1MVKT@1224|Proteobacteria,42M7M@68525|delta/epsilon subdivisions,2MSUN@213481|Bdellovibrionales,2WJ9X@28221|Deltaproteobacteria	213481|Bdellovibrionales	L	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner	-	-	5.99.1.3	ko:K02470,ko:K02622	-	-	-	-	ko00000,ko01000,ko02048,ko03032,ko03036,ko03400	-	-	-	DNA_gyraseB,DNA_gyraseB_C,HATPase_c,Toprim
DYD3_k127_6409363_4	862908.BMS_1252	6.718e-58	204.0	COG0454@1|root,COG0456@2|Bacteria,1N9KA@1224|Proteobacteria,431PF@68525|delta/epsilon subdivisions,2MTBE@213481|Bdellovibrionales,2WW76@28221|Deltaproteobacteria	213481|Bdellovibrionales	K	Acetyltransferase (GNAT) domain	-	-	-	-	-	-	-	-	-	-	-	-	Acetyltransf_1,Acetyltransf_10
DYD3_k127_6409363_2	862908.BMS_1250	2.594e-201	642.0	COG0018@1|root,COG0018@2|Bacteria,1MU4J@1224|Proteobacteria,42MTY@68525|delta/epsilon subdivisions,2MSNP@213481|Bdellovibrionales,2WKII@28221|Deltaproteobacteria	213481|Bdellovibrionales	J	Arginyl-tRNA synthetase	argS	-	6.1.1.19	ko:K01887	ko00970,map00970	M00359,M00360	R03646	RC00055,RC00523	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029	-	-	-	Arg_tRNA_synt_N,DALR_1,tRNA-synt_1d
DYD3_k127_6409363_9	756272.Plabr_0634	1.116e-08	63.0	COG1716@1|root,COG1716@2|Bacteria,2J0FC@203682|Planctomycetes	203682|Planctomycetes	T	FHA domain	-	-	4.6.1.1	ko:K01768	ko00230,ko02025,ko04113,ko04213,map00230,map02025,map04113,map04213	M00695	R00089,R00434	RC00295	ko00000,ko00001,ko00002,ko01000	-	-	-	FHA
DYD3_k127_6414968_16	862908.BMS_0642	1.367e-25	113.0	COG1309@1|root,COG1309@2|Bacteria	2|Bacteria	K	transcriptional regulator	-	-	-	-	-	-	-	-	-	-	-	-	TetR_N
DYD3_k127_6414968_0	1353529.M899_2912	0.0	1072.0	COG0841@1|root,COG0841@2|Bacteria,1MU48@1224|Proteobacteria,42MF6@68525|delta/epsilon subdivisions,2MTNI@213481|Bdellovibrionales,2WJ8D@28221|Deltaproteobacteria	213481|Bdellovibrionales	V	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family	-	-	-	ko:K03296	-	-	-	-	ko00000	2.A.6.2	-	-	ACR_tran
DYD3_k127_6414968_3	1353529.M899_2911	5.744e-92	320.0	COG1538@1|root,COG1538@2|Bacteria	2|Bacteria	MU	efflux transmembrane transporter activity	tolC	-	-	ko:K12340	ko01501,ko01503,ko02020,ko03070,ko04626,ko05133,map01501,map01503,map02020,map03070,map04626,map05133	M00325,M00326,M00339,M00571,M00575,M00646,M00647,M00696,M00697,M00709,M00720,M00821	-	-	ko00000,ko00001,ko00002,ko01504,ko02000,ko02044	1.B.17,2.A.6.2	-	-	OEP
DYD3_k127_6414968_15	1353529.M899_0734	7.187e-31	125.0	COG0848@1|root,COG0848@2|Bacteria,1NN40@1224|Proteobacteria,42USN@68525|delta/epsilon subdivisions,2WQT8@28221|Deltaproteobacteria	28221|Deltaproteobacteria	U	Biopolymer transport protein ExbD/TolR	-	-	-	ko:K03559	-	-	-	-	ko00000,ko02000	1.A.30.2.1	-	-	ExbD
DYD3_k127_6414968_11	862908.BMS_2394	3.077e-40	155.0	COG0811@1|root,COG0811@2|Bacteria,1MX60@1224|Proteobacteria,42S37@68525|delta/epsilon subdivisions,2WNDZ@28221|Deltaproteobacteria	28221|Deltaproteobacteria	U	PFAM MotA TolQ ExbB proton channel	-	-	-	ko:K03561	-	-	-	-	ko00000,ko02000	1.A.30.2.1	-	-	MotA_ExbB
DYD3_k127_6414968_19	1442598.JABW01000029_gene1328	9.695e-14	80.0	COG0810@1|root,COG0810@2|Bacteria	2|Bacteria	M	energy transducer activity	-	-	-	ko:K03832	-	-	-	-	ko00000,ko02000	2.C.1.1	-	-	CarbopepD_reg_2,TonB_C
DYD3_k127_6414968_7	595460.RRSWK_03882	1.237e-55	205.0	COG3264@1|root,COG3264@2|Bacteria,2IY5W@203682|Planctomycetes	203682|Planctomycetes	M	COG3264 Small-conductance mechanosensitive channel	-	-	-	ko:K22051	-	-	-	-	ko00000,ko02000	1.A.23.1.2,1.A.23.1.3	-	-	MS_channel
DYD3_k127_6414968_8	517418.Ctha_0961	6.631e-54	206.0	COG1233@1|root,COG1233@2|Bacteria,1FDYK@1090|Chlorobi	1090|Chlorobi	Q	PFAM amine oxidase	-	-	-	-	-	-	-	-	-	-	-	-	Amino_oxidase
DYD3_k127_6414968_10	4932.YBR244W	9.471e-44	168.0	COG0386@1|root,KOG1651@2759|Eukaryota,3A1XE@33154|Opisthokonta,3P24F@4751|Fungi,3QU3Q@4890|Ascomycota,3RU5R@4891|Saccharomycetes,3S134@4893|Saccharomycetaceae	4751|Fungi	O	Belongs to the glutathione peroxidase family	GPX2	GO:0000302,GO:0003674,GO:0003824,GO:0004601,GO:0004602,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005739,GO:0005740,GO:0005741,GO:0005743,GO:0005758,GO:0005777,GO:0005782,GO:0005829,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0008379,GO:0009056,GO:0009636,GO:0009987,GO:0010035,GO:0016020,GO:0016209,GO:0016491,GO:0016684,GO:0016999,GO:0017001,GO:0017144,GO:0019725,GO:0019866,GO:0019867,GO:0019898,GO:0031090,GO:0031312,GO:0031314,GO:0031315,GO:0031907,GO:0031966,GO:0031967,GO:0031968,GO:0031970,GO:0031974,GO:0031975,GO:0033554,GO:0034599,GO:0034614,GO:0035690,GO:0042221,GO:0042493,GO:0042542,GO:0042579,GO:0042592,GO:0042737,GO:0042743,GO:0042744,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0044237,GO:0044248,GO:0044422,GO:0044424,GO:0044425,GO:0044429,GO:0044438,GO:0044439,GO:0044444,GO:0044446,GO:0044455,GO:0044464,GO:0045454,GO:0046677,GO:0047066,GO:0050789,GO:0050794,GO:0050896,GO:0051186,GO:0051187,GO:0051716,GO:0051920,GO:0055114,GO:0061687,GO:0061691,GO:0061692,GO:0065007,GO:0065008,GO:0070013,GO:0070301,GO:0070887,GO:0071236,GO:0072593,GO:0097237,GO:0098588,GO:0098754,GO:0098805,GO:0098869,GO:1901700,GO:1901701,GO:1990748	1.11.1.9	ko:K00432	ko00480,ko00590,ko04918,map00480,map00590,map04918	-	R00274,R07034,R07035	RC00011,RC00982	ko00000,ko00001,ko01000	-	-	iMM904.YBR244W,iND750.YBR244W	GSHPx
DYD3_k127_6414968_12	1353529.M899_1735	5.181e-38	154.0	COG0142@1|root,COG0142@2|Bacteria,1MUK6@1224|Proteobacteria,42M1B@68525|delta/epsilon subdivisions,2MTBC@213481|Bdellovibrionales,2WK2M@28221|Deltaproteobacteria	213481|Bdellovibrionales	H	Belongs to the FPP GGPP synthase family	ispB	-	2.5.1.1,2.5.1.10,2.5.1.29,2.5.1.30,2.5.1.90	ko:K00805,ko:K02523,ko:K13789	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	M00364,M00366	R01658,R02003,R02061,R09247,R09248	RC00279	ko00000,ko00001,ko00002,ko01000,ko01006	-	-	-	polyprenyl_synt
DYD3_k127_6414968_18	1509405.GV67_15945	2.986e-19	98.0	COG3145@1|root,COG3145@2|Bacteria,1N5HB@1224|Proteobacteria,2U5C6@28211|Alphaproteobacteria,4BAVK@82115|Rhizobiaceae	28211|Alphaproteobacteria	L	Alkylated DNA repair protein	alkB	-	1.14.11.33	ko:K03919	-	-	-	-	ko00000,ko01000,ko03400	-	-	-	2OG-FeII_Oxy_2
DYD3_k127_6414968_9	264462.Bd2357	1.265e-53	196.0	COG0586@1|root,COG0586@2|Bacteria,1R6V4@1224|Proteobacteria,42XP4@68525|delta/epsilon subdivisions,2MTDC@213481|Bdellovibrionales,2WT5P@28221|Deltaproteobacteria	213481|Bdellovibrionales	S	SNARE associated Golgi protein	-	-	-	-	-	-	-	-	-	-	-	-	SNARE_assoc
DYD3_k127_6414968_1	765869.BDW_01230	5.76e-107	377.0	COG3127@1|root,COG3127@2|Bacteria,1MU9R@1224|Proteobacteria,42N9P@68525|delta/epsilon subdivisions,2MSU4@213481|Bdellovibrionales,2WJ0G@28221|Deltaproteobacteria	213481|Bdellovibrionales	Q	FtsX-like permease family	-	-	-	ko:K02004	-	M00258	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	FtsX,MacB_PCD
DYD3_k127_6414968_5	1245469.S58_04070	8.314e-70	242.0	COG4181@1|root,COG4181@2|Bacteria,1MXG9@1224|Proteobacteria,2TS0J@28211|Alphaproteobacteria,3JS8X@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	Q	ABC transporter	ybbA	GO:0000166,GO:0003674,GO:0005488,GO:0005524,GO:0008144,GO:0017076,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0097159,GO:0097367,GO:1901265,GO:1901363	-	ko:K02003	-	M00258	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	ABC_tran
DYD3_k127_6414968_6	926556.Echvi_1581	1.973e-56	203.0	COG2755@1|root,COG2755@2|Bacteria,4NE58@976|Bacteroidetes,47P77@768503|Cytophagia	976|Bacteroidetes	E	GDSL-like Lipase/Acylhydrolase family	tesA	-	3.1.1.5	ko:K10804	ko01040,map01040	-	-	-	ko00000,ko00001,ko01000,ko01004	-	-	-	Lipase_GDSL_2
DYD3_k127_6414968_14	643867.Ftrac_1836	1.067e-31	128.0	COG4276@1|root,COG4276@2|Bacteria,4NQDG@976|Bacteroidetes,47QF6@768503|Cytophagia	976|Bacteroidetes	S	Pfam Polyketide cyclase dehydrase and lipid transport	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_6414968_20	398767.Glov_2755	7.047e-09	67.0	COG1215@1|root,COG1215@2|Bacteria	2|Bacteria	M	transferase activity, transferring glycosyl groups	exoA	GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944	-	ko:K16557	-	-	-	-	ko00000,ko01000,ko01003	-	GT2	-	Glyco_tranf_2_3,Glycos_transf_2
DYD3_k127_6414968_13	1121898.Q766_18465	7.786e-33	136.0	COG0451@1|root,COG0451@2|Bacteria,4NMWC@976|Bacteroidetes,1I18Q@117743|Flavobacteriia,2NTPE@237|Flavobacterium	976|Bacteroidetes	GM	epimerase	yeeZ	-	-	-	-	-	-	-	-	-	-	-	Epimerase,NAD_binding_10,NAD_binding_2
DYD3_k127_6414968_2	225849.swp_0635	2.876e-106	355.0	COG0031@1|root,COG0031@2|Bacteria,1MUBE@1224|Proteobacteria,1RN6J@1236|Gammaproteobacteria,2QBAS@267890|Shewanellaceae	1236|Gammaproteobacteria	E	Pyridoxal-phosphate dependent enzyme	cysK	-	2.5.1.47,4.2.1.22	ko:K01697,ko:K01738	ko00260,ko00270,ko00920,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00260,map00270,map00920,map01100,map01110,map01120,map01130,map01200,map01230	M00021,M00035,M00338	R00891,R00897,R01290,R03601,R04859,R04942	RC00020,RC00056,RC00069,RC00256,RC00489,RC01246,RC02814,RC02821	ko00000,ko00001,ko00002,ko01000	-	-	-	PALP
DYD3_k127_6414968_4	1123008.KB905707_gene1078	2.668e-76	263.0	COG1045@1|root,COG1045@2|Bacteria,4NGZ7@976|Bacteroidetes,2FM9U@200643|Bacteroidia,22XAZ@171551|Porphyromonadaceae	976|Bacteroidetes	E	Serine acetyltransferase	cysE	-	2.3.1.30	ko:K00640	ko00270,ko00920,ko01100,ko01110,ko01120,ko01200,ko01230,ko05111,map00270,map00920,map01100,map01110,map01120,map01200,map01230,map05111	M00021	R00586	RC00004,RC00041	ko00000,ko00001,ko00002,ko01000	-	-	-	Hexapep,SATase_N
DYD3_k127_6414968_17	546264.NEIFLAOT_00921	1.79e-22	100.0	COG0607@1|root,COG0607@2|Bacteria,1MZPW@1224|Proteobacteria,2VU52@28216|Betaproteobacteria,2KRNE@206351|Neisseriales	206351|Neisseriales	P	Rhodanese-like protein	-	-	-	-	-	-	-	-	-	-	-	-	Rhodanese
DYD3_k127_6414968_23	404589.Anae109_3022	3.194e-07	55.0	COG1403@1|root,COG1403@2|Bacteria	2|Bacteria	V	endonuclease activity	-	-	-	ko:K07451	-	-	-	-	ko00000,ko01000,ko02048	-	-	-	HNH,HNH_4
DYD3_k127_6414968_22	63737.Npun_R1098	1.158e-07	55.0	COG3501@1|root,COG3501@2|Bacteria,1G3M3@1117|Cyanobacteria,1HQFU@1161|Nostocales	1117|Cyanobacteria	S	Phage late control gene D protein (GPD)	-	-	-	-	-	-	-	-	-	-	-	-	Phage_GPD
DYD3_k127_6419933_6	1185652.USDA257_c48550	4.994e-16	79.0	2B6XK@1|root,31ZXI@2|Bacteria,1QZ09@1224|Proteobacteria,2U9WC@28211|Alphaproteobacteria	28211|Alphaproteobacteria	S	Domain of unknown function (DUF4062)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4062
DYD3_k127_6419933_3	1353529.M899_2600	9.835e-36	140.0	COG2267@1|root,COG2267@2|Bacteria,1MWF5@1224|Proteobacteria,42T8M@68525|delta/epsilon subdivisions,2MTJB@213481|Bdellovibrionales,2WPBS@28221|Deltaproteobacteria	213481|Bdellovibrionales	I	PFAM alpha beta hydrolase fold	agmH	-	-	-	-	-	-	-	-	-	-	-	Hydrolase_4
DYD3_k127_6419933_0	1201288.M900_2449	1.91e-116	388.0	COG0501@1|root,COG0501@2|Bacteria,1MUXT@1224|Proteobacteria,42P1M@68525|delta/epsilon subdivisions,2WKJ2@28221|Deltaproteobacteria	28221|Deltaproteobacteria	O	PFAM peptidase M48 Ste24p	-	-	3.4.24.84	ko:K06013	ko00900,ko01130,map00900,map01130	-	R09845	RC00141	ko00000,ko00001,ko01000,ko01002,ko04147	-	-	-	Peptidase_M48,Peptidase_M48_N
DYD3_k127_6419933_2	1411685.U062_00525	2.82e-48	181.0	COG0491@1|root,COG0491@2|Bacteria,1MU8Q@1224|Proteobacteria,1S22I@1236|Gammaproteobacteria,1J8ZD@118884|unclassified Gammaproteobacteria	1236|Gammaproteobacteria	S	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid	gloB	-	3.1.2.6	ko:K01069	ko00620,map00620	-	R01736	RC00004,RC00137	ko00000,ko00001,ko01000	-	-	-	HAGH_C,Lactamase_B
DYD3_k127_6419933_1	876044.IMCC3088_1075	1.01e-58	208.0	COG1225@1|root,COG1225@2|Bacteria,1RD4R@1224|Proteobacteria,1RQ7F@1236|Gammaproteobacteria,1J65K@118884|unclassified Gammaproteobacteria	1236|Gammaproteobacteria	O	Peroxiredoxin	bcp	GO:0003674,GO:0003824,GO:0004601,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0008379,GO:0009636,GO:0009987,GO:0016209,GO:0016491,GO:0016667,GO:0016671,GO:0016684,GO:0032843,GO:0042221,GO:0044424,GO:0044444,GO:0044464,GO:0050896,GO:0051716,GO:0051920,GO:0055114,GO:0070887,GO:0097237,GO:0098754,GO:0098869,GO:1990748	1.11.1.15	ko:K03564	-	-	-	-	ko00000,ko01000	-	-	iPC815.YPO3064	AhpC-TSA
DYD3_k127_6419933_4	1201288.M900_2442	1.594e-35	147.0	COG1652@1|root,COG1652@2|Bacteria,1MUBV@1224|Proteobacteria,42QS9@68525|delta/epsilon subdivisions,2MTAP@213481|Bdellovibrionales,2WN3H@28221|Deltaproteobacteria	213481|Bdellovibrionales	S	LysM domain	-	-	-	-	-	-	-	-	-	-	-	-	LysM
DYD3_k127_6424468_7	264462.Bd2150	5.7e-24	114.0	COG0628@1|root,COG0628@2|Bacteria,1PMAP@1224|Proteobacteria,4345I@68525|delta/epsilon subdivisions,2MTCT@213481|Bdellovibrionales,2X23B@28221|Deltaproteobacteria	213481|Bdellovibrionales	S	Pfam:UPF0118	-	-	-	-	-	-	-	-	-	-	-	-	AI-2E_transport
DYD3_k127_6424468_1	1353529.M899_0279	1.195e-169	548.0	COG0318@1|root,COG0318@2|Bacteria,1R5I6@1224|Proteobacteria,42MKC@68525|delta/epsilon subdivisions,2WK3U@28221|Deltaproteobacteria	28221|Deltaproteobacteria	IQ	PFAM AMP-dependent synthetase and ligase	-	-	6.1.3.1	ko:K22319	-	-	-	-	ko00000,ko01000	-	-	-	AMP-binding
DYD3_k127_6424468_4	1353529.M899_0278	2.478e-106	353.0	COG0596@1|root,COG0596@2|Bacteria,1MUSF@1224|Proteobacteria,42NM4@68525|delta/epsilon subdivisions,2MU2Z@213481|Bdellovibrionales,2WJ8H@28221|Deltaproteobacteria	213481|Bdellovibrionales	S	alpha/beta hydrolase fold	-	-	3.8.1.5	ko:K01563,ko:K22318	ko00361,ko00625,ko01100,ko01120,map00361,map00625,map01100,map01120	-	R05284,R05367,R05368,R05369,R05370,R07669,R07670	RC01317,RC01340,RC01341,RC02013	ko00000,ko00001,ko01000	-	-	-	Abhydrolase_1
DYD3_k127_6424468_3	862908.BMS_1441	3.023e-118	391.0	COG0332@1|root,COG0332@2|Bacteria,1P9I2@1224|Proteobacteria,42PE7@68525|delta/epsilon subdivisions,2WJZZ@28221|Deltaproteobacteria	28221|Deltaproteobacteria	I	PFAM 3-Oxoacyl- acyl-carrier-protein (ACP) synthase III	fabH-3	-	-	ko:K22317	-	-	-	-	ko00000	-	-	-	ACP_syn_III,ACP_syn_III_C,Thiolase_N
DYD3_k127_6424468_2	862908.BMS_1442	1.302e-166	536.0	COG1233@1|root,COG1233@2|Bacteria,1MV2R@1224|Proteobacteria,42NXM@68525|delta/epsilon subdivisions,2MUHZ@213481|Bdellovibrionales,2WJ2I@28221|Deltaproteobacteria	213481|Bdellovibrionales	Q	PFAM FAD dependent oxidoreductase	-	-	1.3.99.26,1.3.99.28,1.3.99.29,1.3.99.31,5.2.1.13	ko:K09835,ko:K10027	ko00906,ko01100,ko01110,map00906,map01100,map01110	M00097	R04787,R04798,R04800,R07512,R09691,R09692	RC01214,RC01960,RC02088,RC02605	ko00000,ko00001,ko00002,ko01000	-	-	-	Amino_oxidase
DYD3_k127_6424468_6	1353529.M899_0275	5.561e-29	118.0	COG0236@1|root,COG0236@2|Bacteria,1NHIC@1224|Proteobacteria,42X69@68525|delta/epsilon subdivisions,2WSMW@28221|Deltaproteobacteria	28221|Deltaproteobacteria	IQ	Phosphopantetheine attachment site	-	-	-	-	-	-	-	-	-	-	-	-	PP-binding
DYD3_k127_6424468_0	862908.BMS_1444	4.331e-188	595.0	COG0304@1|root,COG0304@2|Bacteria,1NT86@1224|Proteobacteria,42YK6@68525|delta/epsilon subdivisions,2MUPJ@213481|Bdellovibrionales,2WUMA@28221|Deltaproteobacteria	213481|Bdellovibrionales	IQ	Beta-ketoacyl synthase, C-terminal domain	-	-	2.3.1.179	ko:K09458	ko00061,ko00780,ko01100,ko01212,map00061,map00780,map01100,map01212	M00083,M00572	R04355,R04726,R04952,R04957,R04960,R04963,R04968,R07762,R10115,R10119	RC00039,RC02728,RC02729,RC02888	ko00000,ko00001,ko00002,ko01000,ko01004	-	-	-	Ketoacyl-synt_C,ketoacyl-synt
DYD3_k127_6424468_8	716544.wcw_1270	3.763e-11	69.0	COG2036@1|root,33IMA@2|Bacteria,2JHG5@204428|Chlamydiae	204428|Chlamydiae	B	protein heterodimerization activity	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_6424468_5	1353529.M899_2262	1.951e-76	292.0	COG0689@1|root,COG2982@1|root,COG5184@1|root,COG0689@2|Bacteria,COG2982@2|Bacteria,COG5184@2|Bacteria	2|Bacteria	DZ	guanyl-nucleotide exchange factor activity	-	-	3.2.1.1,3.2.1.4	ko:K01176,ko:K01179,ko:K20276,ko:K21429	ko00500,ko01100,ko02024,ko04973,map00500,map01100,map02024,map04973	-	R02108,R02112,R06200,R11262,R11307,R11308	-	ko00000,ko00001,ko01000,ko01002	-	GH13,GH5,GH9	-	Cadherin_3,DUF4347,He_PIG,HemolysinCabind
DYD3_k127_644074_7	264462.Bd2271	5.315e-74	270.0	COG4389@1|root,COG4389@2|Bacteria,1MWEH@1224|Proteobacteria,42YI9@68525|delta/epsilon subdivisions,2MSZB@213481|Bdellovibrionales,2WTY7@28221|Deltaproteobacteria	213481|Bdellovibrionales	L	Site-specific recombinase	agmG	-	-	-	-	-	-	-	-	-	-	-	SpecificRecomb
DYD3_k127_644074_8	264462.Bd0584	6.952e-73	269.0	COG0642@1|root,COG0745@1|root,COG3850@1|root,COG0745@2|Bacteria,COG2205@2|Bacteria,COG3850@2|Bacteria,1NRP8@1224|Proteobacteria,42M0Y@68525|delta/epsilon subdivisions,2MTIJ@213481|Bdellovibrionales,2WKF3@28221|Deltaproteobacteria	213481|Bdellovibrionales	T	His Kinase A (phosphoacceptor) domain	-	-	-	-	-	-	-	-	-	-	-	-	AAA_16,GAF_2,HATPase_c,HisKA,PAS_4,Pkinase,Response_reg
DYD3_k127_644074_10	1184267.A11Q_1564	1.283e-49	185.0	COG5113@1|root,COG3236@2|Bacteria,1NQ21@1224|Proteobacteria,4309B@68525|delta/epsilon subdivisions,2MT0Y@213481|Bdellovibrionales,2WV8M@28221|Deltaproteobacteria	213481|Bdellovibrionales	O	hydrolase activity, hydrolyzing N-glycosyl compounds	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_644074_9	1353529.M899_1944	3.404e-52	185.0	COG0776@1|root,COG0776@2|Bacteria,1MZ7M@1224|Proteobacteria,42TVD@68525|delta/epsilon subdivisions,2MTB3@213481|Bdellovibrionales,2WQPX@28221|Deltaproteobacteria	213481|Bdellovibrionales	L	Belongs to the bacterial histone-like protein family	ihfB	-	-	ko:K05788	-	-	-	-	ko00000,ko03032,ko03036,ko03400	-	-	-	Bac_DNA_binding
DYD3_k127_644074_5	1353529.M899_1947	3.321e-85	291.0	COG0341@1|root,COG0341@2|Bacteria,1MU74@1224|Proteobacteria,42M2H@68525|delta/epsilon subdivisions,2MSVM@213481|Bdellovibrionales,2WJ8I@28221|Deltaproteobacteria	213481|Bdellovibrionales	U	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA	secF	-	-	ko:K03074	ko03060,ko03070,map03060,map03070	M00335	-	-	ko00000,ko00001,ko00002,ko02044	2.A.6.4,3.A.5.2,3.A.5.7	-	-	SecD_SecF,Sec_GG
DYD3_k127_644074_0	862908.BMS_1572	8.998e-223	704.0	COG0342@1|root,COG0342@2|Bacteria,1MV5U@1224|Proteobacteria,42M6V@68525|delta/epsilon subdivisions,2MSSN@213481|Bdellovibrionales,2WJCI@28221|Deltaproteobacteria	213481|Bdellovibrionales	U	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA	secD	-	-	ko:K03072,ko:K12257	ko02024,ko03060,ko03070,map02024,map03060,map03070	M00335	-	-	ko00000,ko00001,ko00002,ko02044	2.A.6.4,3.A.5.2,3.A.5.7	-	-	SecD_SecF,Sec_GG
DYD3_k127_644074_16	862908.BMS_1571	4.013e-13	72.0	COG1826@1|root,COG1826@2|Bacteria,1NI3F@1224|Proteobacteria,42VIZ@68525|delta/epsilon subdivisions,2MUF8@213481|Bdellovibrionales,2WRC5@28221|Deltaproteobacteria	213481|Bdellovibrionales	U	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system	tatB	-	-	ko:K03116,ko:K03117	ko03060,ko03070,map03060,map03070	M00336	-	-	ko00000,ko00001,ko00002,ko02044	2.A.64	-	-	MttA_Hcf106
DYD3_k127_644074_12	1353529.M899_1950	6.989e-30	121.0	COG1862@1|root,COG1862@2|Bacteria,1MZT2@1224|Proteobacteria,42V1U@68525|delta/epsilon subdivisions,2MTAJ@213481|Bdellovibrionales,2WR76@28221|Deltaproteobacteria	213481|Bdellovibrionales	U	TIGRFAM preprotein translocase, YajC subunit	yajC	-	-	ko:K03210	ko02024,ko03060,ko03070,map02024,map03060,map03070	M00335	-	-	ko00000,ko00001,ko00002,ko02044	3.A.5.1,3.A.5.2	-	-	YajC
DYD3_k127_644074_2	316067.Geob_3451	1.562e-132	433.0	COG0343@1|root,COG0343@2|Bacteria,1MUCA@1224|Proteobacteria,42M5Y@68525|delta/epsilon subdivisions,2WIMT@28221|Deltaproteobacteria,43TNC@69541|Desulfuromonadales	28221|Deltaproteobacteria	J	Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine)	tgt	-	2.4.2.29	ko:K00773	-	-	R03789,R10209	RC00063	ko00000,ko01000,ko03016	-	-	-	TGT
DYD3_k127_644074_3	1201290.M902_2497	7.516e-126	412.0	COG0809@1|root,COG0809@2|Bacteria,1MUH3@1224|Proteobacteria,42MMG@68525|delta/epsilon subdivisions,2MT0D@213481|Bdellovibrionales,2WJ9W@28221|Deltaproteobacteria	213481|Bdellovibrionales	J	Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)	queA	GO:0002097,GO:0002099,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008616,GO:0009058,GO:0009116,GO:0009119,GO:0009163,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016853,GO:0018130,GO:0019438,GO:0034404,GO:0034470,GO:0034641,GO:0034654,GO:0034660,GO:0042455,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046116,GO:0046483,GO:0051075,GO:0055086,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901135,GO:1901137,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659	2.4.99.17	ko:K07568	-	-	-	-	ko00000,ko01000,ko03016	-	-	-	Queuosine_synth
DYD3_k127_644074_4	862908.BMS_1557	2.48e-86	294.0	COG1192@1|root,COG1192@2|Bacteria	2|Bacteria	D	plasmid maintenance	soj	-	-	ko:K03496	-	-	-	-	ko00000,ko03036,ko04812	-	-	-	AAA_31
DYD3_k127_644074_13	1353529.M899_0646	2.049e-28	116.0	COG0724@1|root,COG0724@2|Bacteria,1N6VR@1224|Proteobacteria,42V9Q@68525|delta/epsilon subdivisions,2WRRT@28221|Deltaproteobacteria	28221|Deltaproteobacteria	S	PFAM RNP-1 like RNA-binding protein	-	-	-	-	-	-	-	-	-	-	-	-	RRM_1
DYD3_k127_644074_19	1206739.BAGJ01000171_gene3602	0.0001655	55.0	COG3087@1|root,COG3087@2|Bacteria,2IACS@201174|Actinobacteria,4G1UJ@85025|Nocardiaceae	201174|Actinobacteria	D	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_644074_1	589865.DaAHT2_0329	1.827e-141	480.0	COG3209@1|root,COG3386@1|root,COG3391@1|root,COG5492@1|root,COG3209@2|Bacteria,COG3386@2|Bacteria,COG3391@2|Bacteria,COG5492@2|Bacteria,1MVV1@1224|Proteobacteria,43AER@68525|delta/epsilon subdivisions,2X5UG@28221|Deltaproteobacteria,2MN6Q@213118|Desulfobacterales	28221|Deltaproteobacteria	GM	PFAM NHL repeat containing protein	-	-	-	-	-	-	-	-	-	-	-	-	CarboxypepD_reg,NHL,RHS_repeat
DYD3_k127_6461705_4	1353529.M899_2158	5.87e-54	199.0	COG0513@1|root,COG0513@2|Bacteria,1NUZU@1224|Proteobacteria,42ZQT@68525|delta/epsilon subdivisions,2MTUN@213481|Bdellovibrionales,2WUYJ@28221|Deltaproteobacteria	213481|Bdellovibrionales	JKL	helicase superfamily c-terminal domain	-	-	-	-	-	-	-	-	-	-	-	-	DEAD,Helicase_C
DYD3_k127_6461705_1	404589.Anae109_2395	1.281e-101	344.0	COG1752@1|root,COG1752@2|Bacteria,1Q4S1@1224|Proteobacteria,42S86@68525|delta/epsilon subdivisions,2WNJA@28221|Deltaproteobacteria	28221|Deltaproteobacteria	S	Patatin-like phospholipase	-	-	-	ko:K07001	-	-	-	-	ko00000	-	-	-	Patatin
DYD3_k127_6461705_3	1167006.UWK_00927	2.224e-83	286.0	COG1090@1|root,COG1090@2|Bacteria,1MUB4@1224|Proteobacteria,42QUU@68525|delta/epsilon subdivisions,2WKRY@28221|Deltaproteobacteria,2MN9X@213118|Desulfobacterales	28221|Deltaproteobacteria	S	NAD dependent epimerase/dehydratase family	-	-	-	ko:K07071	-	-	-	-	ko00000	-	-	-	DUF1731,Epimerase
DYD3_k127_6461705_2	765869.BDW_08525	4.986e-89	299.0	COG0501@1|root,COG0501@2|Bacteria,1NVP0@1224|Proteobacteria,42ZZ7@68525|delta/epsilon subdivisions,2MU08@213481|Bdellovibrionales,2WV89@28221|Deltaproteobacteria	213481|Bdellovibrionales	O	Belongs to the peptidase M48B family	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_6461705_6	290397.Adeh_3956	1.511e-22	107.0	2A9VF@1|root,30Z3B@2|Bacteria,1PKZS@1224|Proteobacteria,435JG@68525|delta/epsilon subdivisions,2WZXJ@28221|Deltaproteobacteria,2Z0YG@29|Myxococcales	28221|Deltaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_6461705_0	237368.SCABRO_03304	1.59e-116	391.0	COG1012@1|root,COG1012@2|Bacteria,2IXMZ@203682|Planctomycetes	203682|Planctomycetes	C	Aldehyde dehydrogenase family	-	-	-	-	-	-	-	-	-	-	-	-	Aldedh
DYD3_k127_6477996_5	234267.Acid_0055	5.289e-42	161.0	2AY4N@1|root,31Q6J@2|Bacteria,3Y7H6@57723|Acidobacteria	57723|Acidobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_6477996_2	1236542.BALM01000001_gene272	1.467e-74	262.0	COG1230@1|root,COG1230@2|Bacteria,1MVQB@1224|Proteobacteria,1RMR8@1236|Gammaproteobacteria,2QA2W@267890|Shewanellaceae	1236|Gammaproteobacteria	P	TIGRFAM cation diffusion facilitator family transporter	-	-	-	-	-	-	-	-	-	-	-	-	Cation_efflux
DYD3_k127_6477996_3	1121920.AUAU01000005_gene1030	5.536e-67	238.0	COG0697@1|root,COG0697@2|Bacteria	2|Bacteria	EG	spore germination	MA20_39610	-	-	-	-	-	-	-	-	-	-	-	EamA
DYD3_k127_6477996_6	1443665.JACA01000007_gene191	3.005e-41	158.0	COG1670@1|root,COG1670@2|Bacteria,4NPQC@976|Bacteroidetes,1I27J@117743|Flavobacteriia,2YKSX@290174|Aquimarina	976|Bacteroidetes	J	Acetyltransferase (GNAT) domain	-	-	-	-	-	-	-	-	-	-	-	-	Acetyltransf_3
DYD3_k127_6477996_9	1201290.M902_0831	1.434e-31	132.0	COG2242@1|root,COG2242@2|Bacteria	2|Bacteria	H	protein methyltransferase activity	-	-	2.1.1.303,2.1.1.319	ko:K11434,ko:K20421	ko01059,ko01130,ko04068,ko04922,map01059,map01130,map04068,map04922	M00830	R10963,R11216,R11217,R11219	RC00003,RC00392,RC02120,RC03388,RC03390	ko00000,ko00001,ko00002,ko01000,ko03036	-	-	-	DOT1,Methyltransf_11,Methyltransf_25
DYD3_k127_6477996_0	1353529.M899_2405	8.636e-93	311.0	COG3186@1|root,COG3186@2|Bacteria,1MU29@1224|Proteobacteria,42V44@68525|delta/epsilon subdivisions,2MTBF@213481|Bdellovibrionales,2WSBK@28221|Deltaproteobacteria	213481|Bdellovibrionales	E	Biopterin-dependent aromatic amino acid hydroxylase	phhA	-	1.14.16.1	ko:K00500	ko00360,ko00400,ko00790,ko01100,ko01230,map00360,map00400,map00790,map01100,map01230	-	R01795,R07211	RC00490	ko00000,ko00001,ko01000	-	-	-	Biopterin_H
DYD3_k127_6477996_11	290402.Cbei_3405	1.954e-15	89.0	COG5002@1|root,COG5002@2|Bacteria,1VRP7@1239|Firmicutes,24YHW@186801|Clostridia,36UMP@31979|Clostridiaceae	186801|Clostridia	T	PFAM response regulator receiver	-	-	2.7.13.3	ko:K11527	-	-	-	-	ko00000,ko01000,ko01001,ko02022	-	-	-	HATPase_c,HisKA,PAS_8,PAS_9,Response_reg
DYD3_k127_6477996_7	1178825.ALIH01000010_gene401	5.311e-37	151.0	COG2267@1|root,COG2267@2|Bacteria,4NVE1@976|Bacteroidetes,1I3SC@117743|Flavobacteriia	976|Bacteroidetes	I	Alpha/beta hydrolase family	-	-	-	-	-	-	-	-	-	-	-	-	Abhydrolase_6
DYD3_k127_6477996_12	545697.HMPREF0216_03405	5.84e-12	76.0	COG0500@1|root,COG2226@2|Bacteria,1TRW7@1239|Firmicutes,258QA@186801|Clostridia,36HX1@31979|Clostridiaceae	186801|Clostridia	Q	Ribosomal RNA adenine dimethylase	-	-	-	-	-	-	-	-	-	-	-	-	Methyltransf_11
DYD3_k127_6477996_10	1184267.A11Q_334	5.772e-18	94.0	296W5@1|root,2ZU4Y@2|Bacteria	2|Bacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_6477996_1	1288083.AUKR01000006_gene3932	2.918e-75	261.0	COG3591@1|root,COG3591@2|Bacteria	2|Bacteria	E	Belongs to the peptidase S1B family	-	-	-	-	-	-	-	-	-	-	-	-	Trypsin_2
DYD3_k127_6477996_8	95619.PM1_0228755	6.326e-33	128.0	COG0346@1|root,COG0346@2|Bacteria,1RGZ8@1224|Proteobacteria,1S66M@1236|Gammaproteobacteria	1236|Gammaproteobacteria	E	glyoxalase bleomycin resistance protein dioxygenase	yaeR	-	-	ko:K08234	-	-	-	-	ko00000	-	-	-	Glyoxalase
DYD3_k127_6547443_16	1353529.M899_3438	1.101e-19	97.0	COG0457@1|root,COG0457@2|Bacteria,1NK0T@1224|Proteobacteria,42X28@68525|delta/epsilon subdivisions,2WT4A@28221|Deltaproteobacteria	28221|Deltaproteobacteria	S	Tetratricopeptide repeat	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_6547443_10	1353529.M899_3437	1.063e-44	169.0	COG0664@1|root,COG0664@2|Bacteria,1N4C9@1224|Proteobacteria,42Y10@68525|delta/epsilon subdivisions,2WTGQ@28221|Deltaproteobacteria	28221|Deltaproteobacteria	T	Cyclic nucleotide-monophosphate binding domain	-	-	-	-	-	-	-	-	-	-	-	-	cNMP_binding
DYD3_k127_6547443_9	862908.BMS_3365	1.75e-51	195.0	COG0628@1|root,COG0628@2|Bacteria,1MW0B@1224|Proteobacteria,42PVD@68525|delta/epsilon subdivisions,2WPJW@28221|Deltaproteobacteria	28221|Deltaproteobacteria	S	AI-2E family transporter	-	-	-	-	-	-	-	-	-	-	-	-	AI-2E_transport
DYD3_k127_6547443_7	862908.BMS_3364	1.156e-69	243.0	COG4105@1|root,COG4105@2|Bacteria,1MVS5@1224|Proteobacteria,42RV8@68525|delta/epsilon subdivisions,2MT4R@213481|Bdellovibrionales,2WKU0@28221|Deltaproteobacteria	213481|Bdellovibrionales	M	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane	bamD	-	-	ko:K05807	-	-	-	-	ko00000,ko02000	1.B.33.1	-	-	YfiO
DYD3_k127_6547443_5	1353529.M899_3434	4.869e-88	297.0	COG0457@1|root,COG0457@2|Bacteria,1N5BD@1224|Proteobacteria,42U63@68525|delta/epsilon subdivisions,2MT2I@213481|Bdellovibrionales,2WQUR@28221|Deltaproteobacteria	213481|Bdellovibrionales	S	TPR repeat	-	-	-	-	-	-	-	-	-	-	-	-	TPR_11,TPR_16,TPR_19,TPR_2,TPR_4,TPR_8
DYD3_k127_6547443_8	1353529.M899_3433	1.309e-66	232.0	COG1699@1|root,COG1699@2|Bacteria,1N9E7@1224|Proteobacteria,42V88@68525|delta/epsilon subdivisions,2MT3S@213481|Bdellovibrionales,2WR7H@28221|Deltaproteobacteria	213481|Bdellovibrionales	T	Binds to the C-terminal region of flagellin, which is implicated in polymerization, and participates in the assembly of the flagellum	fliW	-	-	ko:K13626	-	-	-	-	ko00000,ko02035	-	-	-	FliW
DYD3_k127_6547443_13	862908.BMS_3361	2.936e-30	121.0	COG1551@1|root,COG1551@2|Bacteria,1N6PG@1224|Proteobacteria,42WXA@68525|delta/epsilon subdivisions,2MT9Z@213481|Bdellovibrionales,2WSV9@28221|Deltaproteobacteria	213481|Bdellovibrionales	J	Could accelerate the degradation of some genes transcripts potentially through selective RNA binding	csrA	-	-	ko:K03563	ko02020,ko02025,ko02026,ko05111,map02020,map02025,map02026,map05111	-	-	-	ko00000,ko00001,ko03019	-	-	-	CsrA
DYD3_k127_6547443_6	862908.BMS_3360	8.378e-86	294.0	COG1344@1|root,COG1344@2|Bacteria,1N1QF@1224|Proteobacteria,42TTV@68525|delta/epsilon subdivisions,2MT23@213481|Bdellovibrionales,2WQ6T@28221|Deltaproteobacteria	213481|Bdellovibrionales	N	Belongs to the bacterial flagellin family	flgL	-	-	ko:K02397	ko02040,map02040	-	-	-	ko00000,ko00001,ko02035	-	-	-	Flagellin_C,Flagellin_N
DYD3_k127_6547443_1	862908.BMS_3359	1.977e-144	472.0	COG1256@1|root,COG1256@2|Bacteria,1MV2M@1224|Proteobacteria,42PBN@68525|delta/epsilon subdivisions,2MSTC@213481|Bdellovibrionales,2WMU3@28221|Deltaproteobacteria	213481|Bdellovibrionales	N	TIGRFAM Flagellar hook-associated protein, FlgK	flgK	-	-	ko:K02396	ko02040,map02040	-	-	-	ko00000,ko00001,ko02035	-	-	-	Flg_bb_rod,Flg_bbr_C
DYD3_k127_6547443_14	1353529.M899_3428	1.325e-23	103.0	COG2747@1|root,COG2747@2|Bacteria	2|Bacteria	N	bacterial-type flagellum organization	flgM	GO:0000988,GO:0000989,GO:0003674,GO:0008150,GO:0009889,GO:0009892,GO:0010556,GO:0010605,GO:0016989,GO:0019219,GO:0019222,GO:0030162,GO:0031323,GO:0031324,GO:0031326,GO:0032268,GO:0032269,GO:0045861,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051246,GO:0051248,GO:0051252,GO:0060255,GO:0065007,GO:0080090,GO:0140110,GO:1903506,GO:2001141	-	ko:K02398	ko02020,ko02025,ko02026,ko02040,map02020,map02025,map02026,map02040	-	-	-	ko00000,ko00001,ko02035	-	-	-	FlgM
DYD3_k127_6547443_2	1353529.M899_3426	7.501e-142	456.0	COG1706@1|root,COG1706@2|Bacteria,1MVKW@1224|Proteobacteria,42MAU@68525|delta/epsilon subdivisions,2MSMJ@213481|Bdellovibrionales,2WK22@28221|Deltaproteobacteria	213481|Bdellovibrionales	N	Assembles around the rod to form the L-ring and probably protects the motor basal body from shearing forces during rotation	flgI	-	-	ko:K02394	ko02040,map02040	-	-	-	ko00000,ko00001,ko02035	-	-	-	FlgI
DYD3_k127_6547443_11	862908.BMS_3354	5.461e-39	155.0	COG2063@1|root,COG2063@2|Bacteria	2|Bacteria	N	Assembles around the rod to form the L-ring and probably protects the motor basal body from shearing forces during rotation	flgH	-	-	ko:K02393	ko02040,map02040	-	-	-	ko00000,ko00001,ko02035	-	-	-	FlgH
DYD3_k127_6547443_15	862908.BMS_3353	1.618e-21	105.0	COG1261@1|root,COG1261@2|Bacteria	2|Bacteria	N	bacterial-type flagellum organization	flgA	-	-	ko:K02279,ko:K02386	ko02040,map02040	-	-	-	ko00000,ko00001,ko02035,ko02044	-	-	-	ChapFlgA
DYD3_k127_6547443_4	862908.BMS_3352	4.196e-107	352.0	COG4786@1|root,COG4786@2|Bacteria,1MVMA@1224|Proteobacteria,42N3R@68525|delta/epsilon subdivisions,2MSW0@213481|Bdellovibrionales,2WJDN@28221|Deltaproteobacteria	213481|Bdellovibrionales	N	Belongs to the flagella basal body rod proteins family	flgG	-	-	ko:K02392	ko02040,map02040	-	-	-	ko00000,ko00001,ko02035	-	-	-	Flg_bb_rod,Flg_bbr_C
DYD3_k127_6547443_3	1353529.M899_3422	1.422e-108	359.0	COG4786@1|root,COG4786@2|Bacteria,1PZ24@1224|Proteobacteria,42NGI@68525|delta/epsilon subdivisions,2MT0S@213481|Bdellovibrionales,2WMR8@28221|Deltaproteobacteria	213481|Bdellovibrionales	N	Belongs to the flagella basal body rod proteins family	flgF	-	-	ko:K02391,ko:K02392	ko02040,map02040	-	-	-	ko00000,ko00001,ko02035	-	-	-	Flg_bb_rod,Flg_bbr_C
DYD3_k127_6547443_17	1353529.M899_3421	4.474e-13	72.0	COG1722@1|root,COG1722@2|Bacteria,1Q1MQ@1224|Proteobacteria,437CA@68525|delta/epsilon subdivisions,2MTDU@213481|Bdellovibrionales,2X2HU@28221|Deltaproteobacteria	213481|Bdellovibrionales	L	Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides	xseB	-	3.1.11.6	ko:K03602	ko03430,map03430	-	-	-	ko00000,ko00001,ko01000,ko03400	-	-	-	Exonuc_VII_S
DYD3_k127_6547443_0	862908.BMS_3348	1.994e-233	744.0	COG5009@1|root,COG5009@2|Bacteria,1MU5A@1224|Proteobacteria,42MJB@68525|delta/epsilon subdivisions,2MSQ6@213481|Bdellovibrionales,2WIXF@28221|Deltaproteobacteria	213481|Bdellovibrionales	M	Penicillin-binding protein, 1A family	mrcA	-	2.4.1.129,3.4.16.4	ko:K05366	ko00550,ko01100,ko01501,map00550,map01100,map01501	-	-	-	ko00000,ko00001,ko01000,ko01003,ko01011	-	GT51	iAF987.Gmet_0354	PCB_OB,Transgly,Transpeptidase
DYD3_k127_6548985_13	1201290.M902_2020	9.688e-24	117.0	COG3210@1|root,COG3210@2|Bacteria,1NGFP@1224|Proteobacteria,43EIP@68525|delta/epsilon subdivisions,2X8HE@28221|Deltaproteobacteria	28221|Deltaproteobacteria	U	Chaperone of endosialidase	-	-	-	ko:K21449	-	-	-	-	ko00000,ko02000	1.B.40.2	-	-	Peptidase_S74
DYD3_k127_6548985_3	1122165.AUHS01000011_gene2590	2.193e-91	311.0	COG3550@1|root,COG3550@2|Bacteria,1MVAB@1224|Proteobacteria,1RPQR@1236|Gammaproteobacteria,1JE69@118969|Legionellales	118969|Legionellales	S	Pfam:HipA_N	hipA_1	-	2.7.11.1	ko:K07154	-	-	-	-	ko00000,ko01000,ko01001,ko02048	-	-	-	HipA_C
DYD3_k127_6548985_12	1131812.JQMS01000001_gene2905	3.56e-27	113.0	COG3550@1|root,COG3550@2|Bacteria,4NTCR@976|Bacteroidetes,1I2SX@117743|Flavobacteriia,2NXDC@237|Flavobacterium	976|Bacteroidetes	S	HipA N-terminal domain	-	-	2.7.11.1	ko:K07154	-	-	-	-	ko00000,ko01000,ko01001,ko02048	-	-	-	Couple_hipA
DYD3_k127_6548985_18	1131812.JQMS01000001_gene2906	5.268e-13	71.0	COG1476@1|root,COG1476@2|Bacteria,4NYE0@976|Bacteroidetes,1ID6A@117743|Flavobacteriia,2NXH4@237|Flavobacterium	976|Bacteroidetes	K	Helix-turn-helix domain	-	-	-	-	-	-	-	-	-	-	-	-	HTH_3,HTH_31
DYD3_k127_6548985_8	1237149.C900_00783	2.122e-50	183.0	COG0454@1|root,COG0456@2|Bacteria,4NT3M@976|Bacteroidetes,47VFK@768503|Cytophagia	976|Bacteroidetes	K	Acetyltransferase (GNAT) family	-	-	-	-	-	-	-	-	-	-	-	-	Acetyltransf_1
DYD3_k127_6548985_17	679197.HMPREF9336_03430	6.988e-14	75.0	COG3118@1|root,COG3118@2|Bacteria,2IQ9T@201174|Actinobacteria	201174|Actinobacteria	O	belongs to the thioredoxin family	trxC	GO:0003674,GO:0003824,GO:0004791,GO:0005575,GO:0005576,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006091,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0009055,GO:0009636,GO:0009987,GO:0015035,GO:0015036,GO:0015037,GO:0015038,GO:0016020,GO:0016209,GO:0016491,GO:0016651,GO:0016657,GO:0016667,GO:0016668,GO:0016671,GO:0019725,GO:0022900,GO:0030312,GO:0033554,GO:0034599,GO:0042221,GO:0042592,GO:0044237,GO:0044424,GO:0044444,GO:0044464,GO:0045454,GO:0047134,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0055114,GO:0065007,GO:0065008,GO:0070887,GO:0071944,GO:0080007,GO:0097237,GO:0098754,GO:0098869,GO:1990748	-	ko:K03671	ko04621,ko05418,map04621,map05418	-	-	-	ko00000,ko00001,ko03110	-	-	-	Thioredoxin
DYD3_k127_6548985_0	862908.BMS_2439	2.677e-241	774.0	COG0553@1|root,COG0553@2|Bacteria,1MX6H@1224|Proteobacteria,42QIF@68525|delta/epsilon subdivisions,2WKM9@28221|Deltaproteobacteria	28221|Deltaproteobacteria	L	RNA polymerase recycling family C-terminal	rapA	-	-	ko:K03580	-	-	-	-	ko00000,ko01000,ko03021	-	-	-	Helicase_C,RapA_C,SNF2_N
DYD3_k127_6548985_4	313606.M23134_02343	3.097e-82	287.0	COG0526@1|root,COG0526@2|Bacteria,4PMB3@976|Bacteroidetes,47JVX@768503|Cytophagia	976|Bacteroidetes	CO	Redoxin	-	-	-	-	-	-	-	-	-	-	-	-	AhpC-TSA,Redoxin
DYD3_k127_6548985_9	1201288.M900_0843	3.057e-43	160.0	COG3169@1|root,COG3169@2|Bacteria,1RHBQ@1224|Proteobacteria,42SES@68525|delta/epsilon subdivisions,2MT7X@213481|Bdellovibrionales,2WQ9T@28221|Deltaproteobacteria	213481|Bdellovibrionales	S	Putative member of DMT superfamily (DUF486)	-	-	-	ko:K09922	-	-	-	-	ko00000	-	-	-	DMT_6
DYD3_k127_6548985_14	502025.Hoch_1338	9.664e-18	91.0	2FGT4@1|root,348NF@2|Bacteria,1QAAV@1224|Proteobacteria,434Y1@68525|delta/epsilon subdivisions,2WZ8V@28221|Deltaproteobacteria,2Z1KQ@29|Myxococcales	28221|Deltaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_6548985_2	489825.LYNGBM3L_01730	3.675e-107	363.0	COG0076@1|root,COG0076@2|Bacteria,1G3F8@1117|Cyanobacteria,1H9S6@1150|Oscillatoriales	1117|Cyanobacteria	E	PFAM Pyridoxal-dependent decarboxylase conserved domain	-	-	4.1.1.29	ko:K01594	ko00430,ko01100,map00430,map01100	-	R01682,R02466	RC00299	ko00000,ko00001,ko01000	-	-	-	Pyridoxal_deC
DYD3_k127_6548985_11	1353529.M899_2149	2.813e-31	127.0	COG1734@1|root,COG1734@2|Bacteria,1RD08@1224|Proteobacteria,42RVK@68525|delta/epsilon subdivisions,2MUC7@213481|Bdellovibrionales,2WNNA@28221|Deltaproteobacteria	213481|Bdellovibrionales	K	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters	dksA	-	-	ko:K06204	ko02026,map02026	-	-	-	ko00000,ko00001,ko03000,ko03009,ko03021	-	-	-	zf-dskA_traR
DYD3_k127_6548985_6	1353529.M899_3352	3.022e-67	235.0	COG0009@1|root,COG0009@2|Bacteria,1MVPM@1224|Proteobacteria,42QSV@68525|delta/epsilon subdivisions,2WMZ5@28221|Deltaproteobacteria	28221|Deltaproteobacteria	J	Sua5 YciO YrdC YwlC family protein	yrdC	-	2.7.7.87	ko:K07566	-	-	R10463	RC00745	ko00000,ko01000,ko03009,ko03016	-	-	-	Sua5_yciO_yrdC
DYD3_k127_6548985_1	264462.Bd0332	2.713e-148	480.0	COG1252@1|root,COG1252@2|Bacteria,1MX96@1224|Proteobacteria,42PFG@68525|delta/epsilon subdivisions,2MSNE@213481|Bdellovibrionales,2WKPM@28221|Deltaproteobacteria	213481|Bdellovibrionales	C	PFAM FAD-dependent pyridine nucleotide-disulphide oxidoreductase	-	-	1.6.99.3	ko:K03885	ko00190,map00190	-	-	-	ko00000,ko00001,ko01000	-	-	-	Pyr_redox_2
DYD3_k127_6548985_7	1201288.M900_2558	1.672e-64	238.0	COG0840@1|root,COG0840@2|Bacteria,1MU9B@1224|Proteobacteria	1224|Proteobacteria	NT	Methyl-accepting chemotaxis protein	-	-	-	ko:K03406,ko:K05875	ko02020,ko02030,map02020,map02030	-	-	-	ko00000,ko00001,ko02035	-	-	-	4HB_MCP_1,Cache_3-Cache_2,MCPsignal,NIT,dCache_1,dCache_2,sCache_2
DYD3_k127_6548985_19	83219.PM02_00120	1.04e-08	62.0	COG0835@1|root,COG0835@2|Bacteria,1RD1W@1224|Proteobacteria,2U7P9@28211|Alphaproteobacteria,3ZXAX@60136|Sulfitobacter	28211|Alphaproteobacteria	NT	Two component signalling adaptor domain	cheW1	-	-	ko:K03408	ko02020,ko02030,map02020,map02030	-	-	-	ko00000,ko00001,ko02035	-	-	-	CheW
DYD3_k127_6548985_10	1121878.AUGL01000002_gene2247	2.958e-35	150.0	COG1502@1|root,COG1502@2|Bacteria,1MUDJ@1224|Proteobacteria,1RMIF@1236|Gammaproteobacteria	1236|Gammaproteobacteria	I	COG1502 Phosphatidylserine phosphatidylglycerophosphate cardiolipi n synthases and related enzymes	clsC	GO:0003674,GO:0003824,GO:0005575,GO:0006629,GO:0006644,GO:0006650,GO:0006655,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0008808,GO:0009058,GO:0009987,GO:0016020,GO:0016740,GO:0016772,GO:0016780,GO:0019637,GO:0030572,GO:0032048,GO:0032049,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0045017,GO:0046471,GO:0046474,GO:0046486,GO:0071704,GO:0090407,GO:0090483,GO:1901576	-	ko:K06132	ko00564,ko01100,map00564,map01100	-	R11062	RC00017	ko00000,ko00001,ko01000	-	-	-	PLDc_2
DYD3_k127_6548985_16	1201288.M900_A0273	2.813e-14	86.0	COG1196@1|root,COG1196@2|Bacteria	2|Bacteria	D	nuclear chromosome segregation	-	-	-	-	-	-	-	-	-	-	-	-	PhageMin_Tail
DYD3_k127_6611702_5	118168.MC7420_6994	1.094e-32	130.0	COG0500@1|root,COG2226@2|Bacteria,1GQVD@1117|Cyanobacteria	1117|Cyanobacteria	Q	Sulfotransferase family	-	-	-	-	-	-	-	-	-	-	-	-	Sulfotransfer_2
DYD3_k127_6611702_4	1122221.JHVI01000008_gene2290	2.519e-49	182.0	COG2320@1|root,COG2320@2|Bacteria,1WMTH@1297|Deinococcus-Thermus	1297|Deinococcus-Thermus	S	GrpB protein	-	-	-	-	-	-	-	-	-	-	-	-	GrpB
DYD3_k127_6611702_7	1121422.AUMW01000012_gene3000	1.306e-11	66.0	2EH2E@1|root,33AUC@2|Bacteria,1VMDA@1239|Firmicutes,24QWI@186801|Clostridia	186801|Clostridia	S	Uracil-DNA glycosylase	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_6611702_0	765952.PUV_27050	2.399e-144	468.0	COG0482@1|root,COG0482@2|Bacteria,2JFX1@204428|Chlamydiae	204428|Chlamydiae	J	Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34	trmU	-	2.8.1.13	ko:K00566	ko04122,map04122	-	R08700	RC02313,RC02315	ko00000,ko00001,ko01000,ko03016	-	-	-	tRNA_Me_trans
DYD3_k127_6611702_2	862908.BMS_1916	4.237e-69	248.0	COG2234@1|root,COG2234@2|Bacteria,1MXJC@1224|Proteobacteria,42RKA@68525|delta/epsilon subdivisions,2X6B1@28221|Deltaproteobacteria	28221|Deltaproteobacteria	S	Peptidase family M28	-	-	-	-	-	-	-	-	-	-	-	-	Peptidase_M28
DYD3_k127_6611702_6	1117644.MCANPG14_03085	6.679e-27	124.0	COG0482@1|root,COG0482@2|Bacteria,3WSW0@544448|Tenericutes	544448|Tenericutes	J	Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34	trmU	-	2.8.1.13	ko:K00566	ko04122,map04122	-	R08700	RC02313,RC02315	ko00000,ko00001,ko01000,ko03016	-	-	-	tRNA_Me_trans
DYD3_k127_6611702_1	1353529.M899_1901	6.311e-80	270.0	COG0524@1|root,COG0524@2|Bacteria	2|Bacteria	G	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway	gsk	GO:0003674,GO:0003824,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008906,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0044237	2.7.1.20,2.7.1.73,2.7.1.92	ko:K00856,ko:K00892,ko:K03338	ko00230,ko00562,ko01100,ko01120,map00230,map00562,map01100,map01120	-	R00185,R01131,R01228,R05661	RC00002,RC00017	ko00000,ko00001,ko01000	-	-	iSDY_1059.SDY_0442	Nuc_deoxyrib_tr,PfkB
DYD3_k127_6703379_2	1201288.M900_1277	1.597e-11	66.0	COG3677@1|root,COG3677@2|Bacteria,1NUJD@1224|Proteobacteria,42ZJP@68525|delta/epsilon subdivisions,2MTM1@213481|Bdellovibrionales,2WUVR@28221|Deltaproteobacteria	213481|Bdellovibrionales	L	Transposase	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_6703643_3	862908.BMS_2959	8.332e-108	353.0	COG0481@1|root,COG0481@2|Bacteria,1MVZA@1224|Proteobacteria,42M3D@68525|delta/epsilon subdivisions,2MSQQ@213481|Bdellovibrionales,2WJEA@28221|Deltaproteobacteria	213481|Bdellovibrionales	J	Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner	lepA	-	-	ko:K03596	ko05134,map05134	-	-	-	ko00000,ko00001	-	-	-	EFG_C,EFG_II,GTP_EFTU,GTP_EFTU_D2,LepA_C
DYD3_k127_6703643_11	1353529.M899_1310	2.314e-53	194.0	2EFBC@1|root,33949@2|Bacteria,1NQ59@1224|Proteobacteria,42XCI@68525|delta/epsilon subdivisions,2MTCE@213481|Bdellovibrionales,2WT2R@28221|Deltaproteobacteria	213481|Bdellovibrionales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_6703643_8	862908.BMS_2957	2.128e-65	235.0	COG0392@1|root,COG0392@2|Bacteria,1MVZ8@1224|Proteobacteria,42WVD@68525|delta/epsilon subdivisions,2MTCG@213481|Bdellovibrionales,2WSWS@28221|Deltaproteobacteria	213481|Bdellovibrionales	S	Lysylphosphatidylglycerol synthase TM region	-	-	-	ko:K07027	-	-	-	-	ko00000,ko02000	4.D.2	-	-	LPG_synthase_TM
DYD3_k127_6703643_5	1353529.M899_1305	1.225e-85	291.0	COG0388@1|root,COG0388@2|Bacteria,1MUUB@1224|Proteobacteria,42T24@68525|delta/epsilon subdivisions,2MT3Y@213481|Bdellovibrionales,2WPF8@28221|Deltaproteobacteria	213481|Bdellovibrionales	S	PFAM Nitrilase cyanide hydratase and apolipoprotein N-acyltransferase	-	-	-	ko:K11206	-	-	-	-	ko00000,ko01000	-	-	-	CN_hydrolase
DYD3_k127_6703643_15	1201288.M900_0437	3.171e-36	138.0	COG0694@1|root,COG0694@2|Bacteria,1MU8Y@1224|Proteobacteria	1224|Proteobacteria	C	Involved in iron-sulfur cluster biogenesis. Binds a 4Fe- 4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe S proteins. Could also act as a scaffold chaperone for damaged Fe S proteins	nfuA	GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006790,GO:0006807,GO:0006873,GO:0006875,GO:0006879,GO:0006950,GO:0006979,GO:0007154,GO:0008150,GO:0008152,GO:0009267,GO:0009605,GO:0009987,GO:0009991,GO:0010106,GO:0010467,GO:0015976,GO:0016043,GO:0016226,GO:0019538,GO:0019725,GO:0022607,GO:0030003,GO:0031163,GO:0031667,GO:0031668,GO:0031669,GO:0033554,GO:0042592,GO:0042594,GO:0043170,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046916,GO:0048037,GO:0048878,GO:0050801,GO:0050896,GO:0051186,GO:0051536,GO:0051539,GO:0051540,GO:0051604,GO:0051716,GO:0055065,GO:0055072,GO:0055076,GO:0055080,GO:0055082,GO:0065007,GO:0065008,GO:0071496,GO:0071704,GO:0071840,GO:0097428,GO:0098771,GO:1901564	-	ko:K07400	-	-	-	-	ko00000	-	-	-	Fe-S_biosyn,NifU
DYD3_k127_6703643_20	207559.Dde_2825	8.715e-14	76.0	COG2204@1|root,COG3829@1|root,COG2204@2|Bacteria,COG3829@2|Bacteria,1MU0N@1224|Proteobacteria,43BK2@68525|delta/epsilon subdivisions,2X6XX@28221|Deltaproteobacteria,2MH87@213115|Desulfovibrionales	28221|Deltaproteobacteria	T	Sigma-54 factor interaction domain-containing protein	-	-	-	ko:K02481,ko:K07712,ko:K07713	ko02020,map02020	M00497,M00499	-	-	ko00000,ko00001,ko00002,ko02022	-	-	-	HTH_8,PAS_4,Response_reg,Sigma54_activat
DYD3_k127_6703643_17	1201288.M900_0440	7.29e-27	121.0	COG0514@1|root,COG0514@2|Bacteria	2|Bacteria	L	ATP-dependent DNA helicase (RecQ)	-	-	3.6.4.12	ko:K03654	ko03018,map03018	-	-	-	ko00000,ko00001,ko01000,ko03400	-	-	-	DEAD,HRDC,Helicase_C,Helicase_C_2,RQC,RecQ_Zn_bind,UvrD-helicase,UvrD_C
DYD3_k127_6703643_14	585543.HMPREF0969_01435	4.614e-40	154.0	COG0241@1|root,COG0241@2|Bacteria,4NNDD@976|Bacteroidetes,2FT03@200643|Bacteroidia,4ARY8@815|Bacteroidaceae	976|Bacteroidetes	E	Polynucleotide kinase 3 phosphatase	gmhB	-	3.1.3.82,3.1.3.83	ko:K03273	ko00540,ko01100,map00540,map01100	M00064	R05647,R09771	RC00017	ko00000,ko00001,ko00002,ko01000,ko01005	-	-	-	HAD_2,Hydrolase_like
DYD3_k127_6703643_2	1353529.M899_1297	2.279e-191	612.0	COG1132@1|root,COG1132@2|Bacteria,1MUBM@1224|Proteobacteria,42M01@68525|delta/epsilon subdivisions,2MSMT@213481|Bdellovibrionales,2WJ7M@28221|Deltaproteobacteria	213481|Bdellovibrionales	V	Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation	msbA	-	-	ko:K06147,ko:K11085	ko02010,map02010	-	-	-	ko00000,ko00001,ko01000,ko02000	3.A.1.106,3.A.1.109,3.A.1.21	-	-	ABC_membrane,ABC_tran
DYD3_k127_6703643_12	857087.Metme_2506	1.833e-50	184.0	COG2346@1|root,COG2346@2|Bacteria,1QBDD@1224|Proteobacteria,1S8K7@1236|Gammaproteobacteria,1XF6Z@135618|Methylococcales	135618|Methylococcales	C	Group 1 truncated hemoglobin	-	-	-	ko:K06886	-	-	-	-	ko00000	-	-	-	Bac_globin
DYD3_k127_6703643_4	1353529.M899_0542	4.071e-102	341.0	COG1018@1|root,COG1018@2|Bacteria,1QXF0@1224|Proteobacteria	1224|Proteobacteria	C	oxidoreductase FAD NAD(P)-binding	-	-	-	-	-	-	-	-	-	-	-	-	FAD_binding_6,Fer2,NAD_binding_1
DYD3_k127_6703643_13	1201290.M902_2485	8.079e-45	165.0	COG1959@1|root,COG1959@2|Bacteria,1N05H@1224|Proteobacteria,42XSK@68525|delta/epsilon subdivisions,2MUKE@213481|Bdellovibrionales,2X22H@28221|Deltaproteobacteria	213481|Bdellovibrionales	K	Transcriptional regulator	-	-	-	ko:K13771	ko05132,map05132	-	-	-	ko00000,ko00001,ko03000	-	-	-	Rrf2
DYD3_k127_6703643_1	1201288.M900_0448	5.864e-225	703.0	COG0423@1|root,COG0423@2|Bacteria,1R3VX@1224|Proteobacteria,42MHG@68525|delta/epsilon subdivisions,2MSTT@213481|Bdellovibrionales,2WKJC@28221|Deltaproteobacteria	213481|Bdellovibrionales	J	Belongs to the class-II aminoacyl-tRNA synthetase family	glyQS	GO:0003674,GO:0003824,GO:0004812,GO:0004820,GO:0005488,GO:0005515,GO:0016874,GO:0016875,GO:0046983,GO:0140098,GO:0140101	6.1.1.14	ko:K01880	ko00970,map00970	M00359,M00360	R03654	RC00055,RC00523	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029	-	-	-	HGTP_anticodon,tRNA-synt_2b
DYD3_k127_6703643_0	1353529.M899_1295	0.0	1266.0	COG0574@1|root,COG1080@1|root,COG0574@2|Bacteria,COG1080@2|Bacteria,1MU0R@1224|Proteobacteria,42NDJ@68525|delta/epsilon subdivisions,2MSPP@213481|Bdellovibrionales,2WJSH@28221|Deltaproteobacteria	213481|Bdellovibrionales	G	Belongs to the PEP-utilizing enzyme family	ppdK	-	2.7.9.1	ko:K01006	ko00620,ko00710,ko00720,ko01100,ko01120,ko01200,map00620,map00710,map00720,map01100,map01120,map01200	M00169,M00171,M00172,M00173	R00206	RC00002,RC00015	ko00000,ko00001,ko00002,ko01000	-	-	-	PEP-utilizers,PEP-utilizers_C,PPDK_N
DYD3_k127_6703643_7	862908.BMS_2942	8.614e-78	270.0	COG1680@1|root,COG1680@2|Bacteria,1QUYZ@1224|Proteobacteria,42PUC@68525|delta/epsilon subdivisions,2MTD8@213481|Bdellovibrionales,2WK0V@28221|Deltaproteobacteria	213481|Bdellovibrionales	V	beta-lactamase	-	-	-	-	-	-	-	-	-	-	-	-	Beta-lactamase
DYD3_k127_6703643_6	1353529.M899_2309	2.682e-79	303.0	COG2911@1|root,COG3209@1|root,COG2911@2|Bacteria,COG3209@2|Bacteria,1QY1R@1224|Proteobacteria,43C93@68525|delta/epsilon subdivisions,2MUT2@213481|Bdellovibrionales,2X7JI@28221|Deltaproteobacteria	213481|Bdellovibrionales	M	cell wall surface anchor family protein	-	-	-	-	-	-	-	-	-	-	-	-	Peptidase_S74
DYD3_k127_6703643_18	264462.Bd0705	1.301e-22	116.0	COG0729@1|root,COG2911@1|root,COG0729@2|Bacteria,COG2911@2|Bacteria,1QY1J@1224|Proteobacteria,430S6@68525|delta/epsilon subdivisions,2MU2E@213481|Bdellovibrionales,2WVNT@28221|Deltaproteobacteria	1224|Proteobacteria	M	Chaperone of endosialidase	-	-	-	-	-	-	-	-	-	-	-	-	Peptidase_S74
DYD3_k127_6703643_16	1353529.M899_2569	2.641e-29	138.0	COG0729@1|root,COG2911@1|root,COG0729@2|Bacteria,COG2911@2|Bacteria,1N928@1224|Proteobacteria	1224|Proteobacteria	M	Chaperone of endosialidase	-	-	-	-	-	-	-	-	-	-	-	-	Peptidase_S74
DYD3_k127_6703643_10	1353529.M899_2680	4.032e-56	226.0	COG3209@1|root,COG3209@2|Bacteria	2|Bacteria	M	self proteolysis	-	-	-	-	-	-	-	-	-	-	-	-	VCBS
DYD3_k127_6703643_9	264462.Bd2088	8.502e-57	216.0	COG2911@1|root,COG3209@1|root,COG2911@2|Bacteria,COG3209@2|Bacteria,1QY1R@1224|Proteobacteria,43C93@68525|delta/epsilon subdivisions,2MUT2@213481|Bdellovibrionales,2X7JI@28221|Deltaproteobacteria	213481|Bdellovibrionales	M	cell wall surface anchor family protein	-	-	-	-	-	-	-	-	-	-	-	-	Peptidase_S74
DYD3_k127_6756132_11	1353529.M899_0257	2.256e-52	199.0	28RFZ@1|root,2ZDV2@2|Bacteria,1P854@1224|Proteobacteria	1224|Proteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_6756132_0	1353529.M899_0255	0.0	1205.0	COG0506@1|root,COG1012@1|root,COG0506@2|Bacteria,COG1012@2|Bacteria,1MV93@1224|Proteobacteria,42MQH@68525|delta/epsilon subdivisions,2MSPU@213481|Bdellovibrionales,2WJPV@28221|Deltaproteobacteria	213481|Bdellovibrionales	C	Oxidizes proline to glutamate for use as a carbon and nitrogen source	putA	-	1.2.1.88,1.5.5.2	ko:K13821	ko00250,ko00330,ko01100,ko01110,ko01130,map00250,map00330,map01100,map01110,map01130	-	R00245,R00707,R00708,R01253,R04444,R04445,R05051	RC00080,RC00083,RC00216,RC00242,RC00255	ko00000,ko00001,ko01000,ko03000	-	-	iAF987.Gmet_3512	Aldedh,Pro_dh
DYD3_k127_6756132_15	1201290.M902_0937	7.906e-31	132.0	COG0345@1|root,COG0345@2|Bacteria,1R5J1@1224|Proteobacteria,42P7F@68525|delta/epsilon subdivisions,2WJW9@28221|Deltaproteobacteria	28221|Deltaproteobacteria	E	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline	proC	-	1.5.1.2	ko:K00286	ko00330,ko01100,ko01110,ko01130,ko01230,map00330,map01100,map01110,map01130,map01230	M00015	R01248,R01251,R03291,R03293	RC00054,RC00083	ko00000,ko00001,ko00002,ko01000	-	-	iAF987.Gmet_0899	F420_oxidored,P5CR_dimer
DYD3_k127_6756132_17	1285586.H131_12883	1.811e-24	117.0	COG0726@1|root,COG0726@2|Bacteria,1V6DN@1239|Firmicutes,4HEPH@91061|Bacilli,3IXMB@400634|Lysinibacillus	91061|Bacilli	G	Polysaccharide deacetylase	-	-	3.5.1.104	ko:K22278	-	-	-	-	ko00000,ko01000	-	-	-	DUF3298,Polysacc_deac_1
DYD3_k127_6756132_21	617140.AJZE01000008_gene3462	2.997e-14	81.0	COG2384@1|root,COG2384@2|Bacteria,1RBQ3@1224|Proteobacteria,1S2DU@1236|Gammaproteobacteria,1XVG2@135623|Vibrionales	135623|Vibrionales	S	tRNA (adenine(22)-N(1))-methyltransferase	-	-	2.1.1.217	ko:K06967	-	-	-	-	ko00000,ko01000,ko03016	-	-	-	Methyltransf_18
DYD3_k127_6756132_9	765869.BDW_02285	2.124e-56	219.0	COG1305@1|root,COG1305@2|Bacteria,1MWCE@1224|Proteobacteria,42NIZ@68525|delta/epsilon subdivisions,2MU0Q@213481|Bdellovibrionales,2WM5U@28221|Deltaproteobacteria	213481|Bdellovibrionales	E	PFAM transglutaminase domain protein	-	-	2.3.2.13	ko:K22452	-	-	-	-	ko00000,ko01000	-	-	-	DUF3488,DUF4129,Transglut_core
DYD3_k127_6756132_18	443152.MDG893_06469	2.542e-20	101.0	COG1721@1|root,COG1721@2|Bacteria,1R3QD@1224|Proteobacteria,1S5F7@1236|Gammaproteobacteria,466X1@72275|Alteromonadaceae	1236|Gammaproteobacteria	S	conserved protein (some members contain a von Willebrand factor type A (vWA) domain)	-	-	-	-	-	-	-	-	-	-	-	-	DUF58
DYD3_k127_6756132_6	1149133.ppKF707_5031	5.998e-83	285.0	COG0714@1|root,COG0714@2|Bacteria,1MUFN@1224|Proteobacteria,1RP45@1236|Gammaproteobacteria,1YDVU@136841|Pseudomonas aeruginosa group	1236|Gammaproteobacteria	S	ATPase family associated with various cellular activities (AAA)	moxR	-	-	ko:K03924	-	-	-	-	ko00000,ko01000	-	-	-	AAA_3
DYD3_k127_6756132_24	1126627.BAWE01000006_gene6479	3.901e-05	51.0	COG2801@1|root,COG2801@2|Bacteria,1MXKK@1224|Proteobacteria,2TTM6@28211|Alphaproteobacteria,3JS4U@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	L	PFAM Integrase	-	-	-	-	-	-	-	-	-	-	-	-	rve
DYD3_k127_6756132_16	1535422.ND16A_2082	1.295e-30	127.0	COG2801@1|root,COG2801@2|Bacteria,1MXKK@1224|Proteobacteria,1RSMZ@1236|Gammaproteobacteria	1236|Gammaproteobacteria	L	PFAM Integrase	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_6756132_14	1535422.ND16A_2082	4.983e-34	136.0	COG2801@1|root,COG2801@2|Bacteria,1MXKK@1224|Proteobacteria,1RSMZ@1236|Gammaproteobacteria	1236|Gammaproteobacteria	L	PFAM Integrase	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_6756132_8	595537.Varpa_0888	5.76e-61	212.0	COG0662@1|root,COG0662@2|Bacteria,1RHWU@1224|Proteobacteria,2VT6E@28216|Betaproteobacteria,4AFMC@80864|Comamonadaceae	28216|Betaproteobacteria	G	PFAM Cupin 2, conserved barrel domain protein	-	-	-	-	-	-	-	-	-	-	-	-	Cupin_2
DYD3_k127_6756132_20	862908.BMS_3098	1.374e-17	82.0	COG3646@1|root,COG3646@2|Bacteria	2|Bacteria	L	Phage regulatory protein	-	-	-	-	-	-	-	-	-	-	-	-	Phage_pRha
DYD3_k127_6756132_12	1201288.M900_A0501	1.275e-51	194.0	COG4974@1|root,COG4974@2|Bacteria,1QU6A@1224|Proteobacteria,42Q4U@68525|delta/epsilon subdivisions,2MTJ2@213481|Bdellovibrionales,2WJ08@28221|Deltaproteobacteria	213481|Bdellovibrionales	L	Belongs to the 'phage' integrase family. XerC subfamily	-	-	-	ko:K03733,ko:K04763	-	-	-	-	ko00000,ko03036	-	-	-	Phage_int_SAM_1,Phage_integrase
DYD3_k127_6756132_19	887898.HMPREF0551_1099	7.393e-19	86.0	COG0136@1|root,COG0136@2|Bacteria,1MUHG@1224|Proteobacteria,2VH2N@28216|Betaproteobacteria,1K10F@119060|Burkholderiaceae	28216|Betaproteobacteria	E	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate	asd	-	1.2.1.11	ko:K00133	ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01210,map01230	M00016,M00017,M00018,M00033,M00525,M00526,M00527	R02291	RC00684	ko00000,ko00001,ko00002,ko01000	-	-	-	Semialdhyde_dh,Semialdhyde_dhC
DYD3_k127_6756132_2	314282.PCNPT3_11450	2.737e-118	387.0	COG0136@1|root,COG0136@2|Bacteria,1MUHG@1224|Proteobacteria,1RMN3@1236|Gammaproteobacteria,2QHNY@267894|Psychromonadaceae	1236|Gammaproteobacteria	E	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate	asd	GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0004073,GO:0006082,GO:0006520,GO:0006549,GO:0006553,GO:0006555,GO:0006566,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009066,GO:0009067,GO:0009081,GO:0009082,GO:0009085,GO:0009086,GO:0009088,GO:0009089,GO:0009097,GO:0009987,GO:0016053,GO:0016491,GO:0016620,GO:0016903,GO:0019752,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0046394,GO:0046451,GO:0055114,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607	1.2.1.11	ko:K00133	ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01210,map01230	M00016,M00017,M00018,M00033,M00525,M00526,M00527	R02291	RC00684	ko00000,ko00001,ko00002,ko01000	-	-	-	Semialdhyde_dh,Semialdhyde_dhC
DYD3_k127_6756132_1	1184267.A11Q_1247	6.237e-133	439.0	COG0527@1|root,COG0527@2|Bacteria,1MW3H@1224|Proteobacteria,42NDT@68525|delta/epsilon subdivisions,2MSU7@213481|Bdellovibrionales,2WNH1@28221|Deltaproteobacteria	213481|Bdellovibrionales	E	Belongs to the aspartokinase family	-	-	2.7.2.4	ko:K00928	ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01210,map01230	M00016,M00017,M00018,M00033,M00525,M00526,M00527	R00480	RC00002,RC00043	ko00000,ko00001,ko00002,ko01000	-	-	-	AA_kinase
DYD3_k127_6756132_7	1201288.M900_A0492	7.119e-65	228.0	COG0289@1|root,COG0289@2|Bacteria,1MUCT@1224|Proteobacteria,42N84@68525|delta/epsilon subdivisions,2MT79@213481|Bdellovibrionales,2WJKT@28221|Deltaproteobacteria	213481|Bdellovibrionales	E	Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate	dapB	GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0008839,GO:0009058,GO:0009987,GO:0016053,GO:0016491,GO:0016627,GO:0016628,GO:0019752,GO:0019877,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046451,GO:0055114,GO:0071704,GO:1901564,GO:1901566,GO:1901576	1.17.1.8	ko:K00215	ko00261,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00261,map00300,map01100,map01110,map01120,map01130,map01230	M00016,M00525,M00526,M00527	R04198,R04199	RC00478	ko00000,ko00001,ko00002,ko01000	-	-	-	DapB_C,DapB_N
DYD3_k127_6756132_5	862908.BMS_1745	1.125e-102	342.0	COG0329@1|root,COG0329@2|Bacteria,1MUCM@1224|Proteobacteria,42M0X@68525|delta/epsilon subdivisions,2MT2R@213481|Bdellovibrionales,2WK4D@28221|Deltaproteobacteria	213481|Bdellovibrionales	E	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)	dapA	-	4.3.3.7	ko:K01714	ko00261,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00261,map00300,map01100,map01110,map01120,map01130,map01230	M00016,M00525,M00526,M00527	R10147	RC03062,RC03063	ko00000,ko00001,ko00002,ko01000	-	-	-	DHDPS
DYD3_k127_6756132_3	862908.BMS_1746	3.165e-111	363.0	COG2171@1|root,COG2171@2|Bacteria,1MU0Y@1224|Proteobacteria,42SPQ@68525|delta/epsilon subdivisions,2MT0X@213481|Bdellovibrionales,2WPX1@28221|Deltaproteobacteria	213481|Bdellovibrionales	E	Belongs to the transferase hexapeptide repeat family	dapD	-	2.3.1.117	ko:K00674	ko00300,ko01100,ko01120,ko01230,map00300,map01100,map01120,map01230	M00016	R04365	RC00004,RC01136	ko00000,ko00001,ko00002,ko01000	-	-	-	Hexapep,Hexapep_2,THDPS_N_2
DYD3_k127_6756132_4	1353529.M899_1793	5.772e-105	350.0	COG0019@1|root,COG0019@2|Bacteria,1MUA6@1224|Proteobacteria,42KZH@68525|delta/epsilon subdivisions,2WIRM@28221|Deltaproteobacteria	28221|Deltaproteobacteria	E	Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine	-	-	4.1.1.20	ko:K01586	ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00300,map01100,map01110,map01120,map01130,map01230	M00016,M00525,M00526,M00527	R00451	RC00299	ko00000,ko00001,ko00002,ko01000	-	-	-	Orn_Arg_deC_N,Orn_DAP_Arg_deC
DYD3_k127_675968_3	1201288.M900_0497	1.128e-49	180.0	COG3677@1|root,COG3677@2|Bacteria,1NUJD@1224|Proteobacteria,42ZJP@68525|delta/epsilon subdivisions,2MTUZ@213481|Bdellovibrionales,2WUVR@28221|Deltaproteobacteria	213481|Bdellovibrionales	L	Transposase	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_675968_5	67593.Physo140340	0.000801	49.0	COG0666@1|root,KOG0505@2759|Eukaryota	2759|Eukaryota	O	positive regulation of myosin-light-chain-phosphatase activity	-	-	-	ko:K06270	ko04022,ko04024,ko04270,ko04510,ko04611,ko04810,ko04921,ko05205,map04022,map04024,map04270,map04510,map04611,map04810,map04921,map05205	-	-	-	ko00000,ko00001,ko01009	-	-	-	Ank_2,Ank_4,Ank_5,PRKG1_interact,RA
DYD3_k127_675968_1	1353529.M899_2349	9.626e-230	718.0	COG1249@1|root,COG1249@2|Bacteria,1MU2U@1224|Proteobacteria,42N8Y@68525|delta/epsilon subdivisions,2MSPX@213481|Bdellovibrionales,2WIR7@28221|Deltaproteobacteria	213481|Bdellovibrionales	C	Pyridine nucleotide-disulphide oxidoreductase, dimerisation	lpdA-1	-	1.8.1.4	ko:K00382	ko00010,ko00020,ko00260,ko00280,ko00620,ko00630,ko00640,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00020,map00260,map00280,map00620,map00630,map00640,map01100,map01110,map01120,map01130,map01200	M00009,M00011,M00036,M00307,M00532	R00209,R01221,R01698,R03815,R07618,R08549	RC00004,RC00022,RC00583,RC02742,RC02833,RC02834	br01601,ko00000,ko00001,ko00002,ko01000,ko04147	-	-	-	Pyr_redox_2,Pyr_redox_dim
DYD3_k127_675968_2	1353529.M899_2350	6.901e-155	498.0	COG0508@1|root,COG0508@2|Bacteria,1MUJD@1224|Proteobacteria,42N18@68525|delta/epsilon subdivisions,2MSMH@213481|Bdellovibrionales,2WJSK@28221|Deltaproteobacteria	213481|Bdellovibrionales	C	The 2-oxoglutarate dehydrogenase complex catalyzes the overall conversion of 2-oxoglutarate to succinyl-CoA and CO(2)	sucB	-	2.3.1.12,2.3.1.61	ko:K00627,ko:K00658	ko00010,ko00020,ko00310,ko00620,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00020,map00310,map00620,map01100,map01110,map01120,map01130,map01200	M00009,M00011,M00032,M00307	R00209,R02569,R02570,R02571,R08549	RC00004,RC02727,RC02742,RC02833,RC02857	br01601,ko00000,ko00001,ko00002,ko01000	-	-	iAF987.Gmet_2766	2-oxoacid_dh,Biotin_lipoyl,E3_binding
DYD3_k127_675968_0	862908.BMS_2258	0.0	1120.0	COG0567@1|root,COG0567@2|Bacteria,1MVBF@1224|Proteobacteria,42NY6@68525|delta/epsilon subdivisions,2MSSY@213481|Bdellovibrionales,2WJSE@28221|Deltaproteobacteria	213481|Bdellovibrionales	C	Dehydrogenase E1 component	sucA	-	1.2.4.2	ko:K00164	ko00020,ko00310,ko00380,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00310,map00380,map01100,map01110,map01120,map01130,map01200	M00009,M00011,M00032	R00621,R01933,R01940,R03316,R08549	RC00004,RC00027,RC00627,RC02743,RC02833,RC02883	br01601,ko00000,ko00001,ko00002,ko01000	-	-	-	2-oxogl_dehyd_N,E1_dh,OxoGdeHyase_C,Transket_pyr
DYD3_k127_675968_4	264462.Bd3206	8.439e-34	138.0	COG0400@1|root,COG0400@2|Bacteria,1N0UF@1224|Proteobacteria,42TUA@68525|delta/epsilon subdivisions,2MT5K@213481|Bdellovibrionales,2WQDY@28221|Deltaproteobacteria	213481|Bdellovibrionales	S	Serine hydrolase (FSH1)	-	-	-	ko:K06999	-	-	-	-	ko00000	-	-	-	Abhydrolase_2
DYD3_k127_6760326_3	380703.AHA_3344	8.09e-61	212.0	COG0365@1|root,COG0365@2|Bacteria,1MUF5@1224|Proteobacteria,1RMNZ@1236|Gammaproteobacteria,1Y5FM@135624|Aeromonadales	135624|Aeromonadales	F	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA	acsA	-	6.2.1.1	ko:K01895	ko00010,ko00620,ko00640,ko00680,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00620,map00640,map00680,map00720,map01100,map01110,map01120,map01130,map01200	M00357	R00235,R00236,R00316,R00926,R01354	RC00004,RC00012,RC00043,RC00070,RC02746,RC02816	ko00000,ko00001,ko00002,ko01000,ko01004	-	-	-	ACAS_N,AMP-binding,AMP-binding_C
DYD3_k127_6760326_2	930166.CD58_12625	5.814e-65	225.0	COG3791@1|root,COG3791@2|Bacteria,1RD31@1224|Proteobacteria,1S42C@1236|Gammaproteobacteria	1236|Gammaproteobacteria	S	Alanine acetyltransferase	-	-	-	-	-	-	-	-	-	-	-	-	GFA
DYD3_k127_6760326_6	765869.BDW_01080	1.253e-29	123.0	COG0782@1|root,COG0782@2|Bacteria,1MZNY@1224|Proteobacteria,42SYI@68525|delta/epsilon subdivisions,2MUB6@213481|Bdellovibrionales,2WPTM@28221|Deltaproteobacteria	213481|Bdellovibrionales	K	PFAM transcription elongation factor GreA GreB domain protein	rnk	-	-	ko:K06140	-	-	-	-	ko00000,ko03000	-	-	-	GreA_GreB,Rnk_N
DYD3_k127_6760326_4	675814.VIC_001630	9.659e-32	138.0	COG2755@1|root,COG2755@2|Bacteria	2|Bacteria	E	lipolytic protein G-D-S-L family	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_6760326_7	765869.BDW_04175	2.891e-07	61.0	COG3762@1|root,COG3762@2|Bacteria,1R61N@1224|Proteobacteria,42QZE@68525|delta/epsilon subdivisions,2MUHI@213481|Bdellovibrionales,2WS8W@28221|Deltaproteobacteria	213481|Bdellovibrionales	S	Membrane	-	-	-	ko:K08988	-	-	-	-	ko00000	-	-	-	TPM_phosphatase
DYD3_k127_6760326_5	1123368.AUIS01000044_gene17	8.815e-31	132.0	COG1512@1|root,COG1512@2|Bacteria,1PB41@1224|Proteobacteria,1S38U@1236|Gammaproteobacteria	1236|Gammaproteobacteria	S	COG1512 Beta-propeller domains of methanol dehydrogenase type	-	-	-	ko:K06872	-	-	-	-	ko00000	-	-	-	TPM_phosphatase
DYD3_k127_6760326_1	765869.BDW_04165	4.996e-73	251.0	COG1704@1|root,COG1704@2|Bacteria,1MVH0@1224|Proteobacteria,42R4C@68525|delta/epsilon subdivisions,2MTFX@213481|Bdellovibrionales,2WKG9@28221|Deltaproteobacteria	213481|Bdellovibrionales	S	PFAM LemA family	-	-	-	ko:K03744	-	-	-	-	ko00000	-	-	-	LemA
DYD3_k127_6760326_8	1125863.JAFN01000001_gene120	0.0004873	46.0	COG0268@1|root,COG0268@2|Bacteria,1NITA@1224|Proteobacteria,42V4U@68525|delta/epsilon subdivisions,2WR9I@28221|Deltaproteobacteria	28221|Deltaproteobacteria	J	Binds directly to 16S ribosomal RNA	rpsT	-	-	ko:K02968	ko03010,map03010	M00178	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_S20p
DYD3_k127_6760326_0	1353529.M899_2808	3.466e-87	293.0	COG1250@1|root,COG1250@2|Bacteria,1MU9P@1224|Proteobacteria,42M6J@68525|delta/epsilon subdivisions,2MSM2@213481|Bdellovibrionales,2WJZQ@28221|Deltaproteobacteria	213481|Bdellovibrionales	I	PFAM 3-hydroxyacyl-CoA dehydrogenase	mmgB	-	1.1.1.157	ko:K00074	ko00360,ko00362,ko00650,ko01100,ko01120,map00360,map00362,map00650,map01100,map01120	-	R01976,R05576,R06941	RC00029,RC00117	ko00000,ko00001,ko01000	-	-	-	3HCDH,3HCDH_N
DYD3_k127_6761502_1	76114.ebA152	8.881e-197	639.0	COG0451@1|root,COG0451@2|Bacteria,1NXWA@1224|Proteobacteria,2VPQ2@28216|Betaproteobacteria	28216|Betaproteobacteria	GM	Vitamin K epoxide reductase family	-	-	-	-	-	-	-	-	-	-	-	-	Epimerase,VKOR
DYD3_k127_6761502_13	880073.Calab_1349	6.955e-26	113.0	COG0071@1|root,COG0071@2|Bacteria,2NPWF@2323|unclassified Bacteria	2|Bacteria	O	Belongs to the small heat shock protein (HSP20) family	-	-	-	ko:K13993	ko04141,map04141	-	-	-	ko00000,ko00001,ko03110	-	-	-	HSP20
DYD3_k127_6761502_2	153721.MYP_3447	9.211e-164	541.0	COG0475@1|root,COG0490@1|root,COG0475@2|Bacteria,COG0490@2|Bacteria,4NGF6@976|Bacteroidetes,47N01@768503|Cytophagia	976|Bacteroidetes	P	TrkA-C domain	nhaA	-	-	ko:K03455	-	-	-	-	ko00000	2.A.37	-	-	Na_H_Exchanger,TrkA_C
DYD3_k127_6761502_20	1163617.SCD_n02294	4.064e-12	72.0	COG3437@1|root,COG3437@2|Bacteria,1P1A3@1224|Proteobacteria,2VIT3@28216|Betaproteobacteria	28216|Betaproteobacteria	T	response regulator	-	-	-	-	-	-	-	-	-	-	-	-	HD,HD_5,Response_reg
DYD3_k127_6761502_21	1336243.JAEA01000006_gene301	2.84e-11	66.0	COG0789@1|root,COG0789@2|Bacteria,1N831@1224|Proteobacteria,2UFMB@28211|Alphaproteobacteria,1JWK5@119045|Methylobacteriaceae	28211|Alphaproteobacteria	K	MerR HTH family regulatory protein	-	-	-	ko:K18997	-	-	-	-	ko00000,ko03036	-	-	-	MerR_2
DYD3_k127_6761502_6	570967.JMLV01000004_gene699	2.475e-66	237.0	COG0484@1|root,COG0484@2|Bacteria,1MUZ4@1224|Proteobacteria,2TR01@28211|Alphaproteobacteria,2JQKE@204441|Rhodospirillales	204441|Rhodospirillales	O	Molecular chaperone	cbpA	-	-	-	-	-	-	-	-	-	-	-	DnaJ,DnaJ_C
DYD3_k127_6761502_4	264462.Bd2161	5.993e-108	358.0	COG0730@1|root,COG0730@2|Bacteria,1NJ47@1224|Proteobacteria,42QRS@68525|delta/epsilon subdivisions,2MTBI@213481|Bdellovibrionales,2WN5M@28221|Deltaproteobacteria	213481|Bdellovibrionales	S	membrane transporter protein	-	-	-	ko:K07090	-	-	-	-	ko00000	-	-	-	TauE
DYD3_k127_6761502_9	264462.Bd3628	9.071e-54	192.0	COG2314@1|root,COG2314@2|Bacteria,1RHUU@1224|Proteobacteria,42SAT@68525|delta/epsilon subdivisions,2MSZC@213481|Bdellovibrionales,2WPAN@28221|Deltaproteobacteria	213481|Bdellovibrionales	S	PFAM TM2 domain containing protein	-	-	-	-	-	-	-	-	-	-	-	-	TM2
DYD3_k127_6761502_5	1183438.GKIL_3827	1.21e-101	340.0	COG0861@1|root,COG0861@2|Bacteria	2|Bacteria	P	Integral membrane protein TerC family	alx	GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944	-	ko:K05794	-	-	-	-	ko00000	-	-	-	TerC
DYD3_k127_6761502_17	264462.Bd1718	1.4e-14	82.0	COG3932@1|root,COG3932@2|Bacteria,1Q4G9@1224|Proteobacteria,433GM@68525|delta/epsilon subdivisions,2MTZ5@213481|Bdellovibrionales,2WY27@28221|Deltaproteobacteria	213481|Bdellovibrionales	S	Exopolysaccharide synthesis, ExoD	-	-	-	-	-	-	-	-	-	-	-	-	ExoD
DYD3_k127_6761502_15	1353529.M899_2858	9.675e-21	93.0	COG0300@1|root,COG0300@2|Bacteria,1PNDU@1224|Proteobacteria,42S4T@68525|delta/epsilon subdivisions,2WQWI@28221|Deltaproteobacteria	28221|Deltaproteobacteria	S	Enoyl-(Acyl carrier protein) reductase	-	-	-	-	-	-	-	-	-	-	-	-	adh_short
DYD3_k127_6761502_11	1353529.M899_2858	2.216e-42	160.0	COG0300@1|root,COG0300@2|Bacteria,1PNDU@1224|Proteobacteria,42S4T@68525|delta/epsilon subdivisions,2WQWI@28221|Deltaproteobacteria	28221|Deltaproteobacteria	S	Enoyl-(Acyl carrier protein) reductase	-	-	-	-	-	-	-	-	-	-	-	-	adh_short
DYD3_k127_6761502_7	869210.Marky_0093	8.041e-66	238.0	COG3239@1|root,COG3239@2|Bacteria,1WJFB@1297|Deinococcus-Thermus	1297|Deinococcus-Thermus	I	Fatty acid desaturase	-	-	-	-	-	-	-	-	-	-	-	-	FA_desaturase
DYD3_k127_6761502_10	1267211.KI669560_gene749	2.034e-53	196.0	COG5587@1|root,COG5587@2|Bacteria,4NNS3@976|Bacteroidetes,1ISUQ@117747|Sphingobacteriia	976|Bacteroidetes	S	TIGRFAM TIGR02453 family protein	-	-	-	-	-	-	-	-	-	-	-	-	DUF2461
DYD3_k127_6761502_19	1122599.AUGR01000006_gene3693	1.164e-13	79.0	COG1309@1|root,COG1309@2|Bacteria,1RDIM@1224|Proteobacteria,1S4DI@1236|Gammaproteobacteria,1XJJB@135619|Oceanospirillales	135619|Oceanospirillales	K	transcriptional regulator	-	-	-	-	-	-	-	-	-	-	-	-	TetR_N
DYD3_k127_6761502_0	1184267.A11Q_1742	0.0	1371.0	COG0841@1|root,COG0841@2|Bacteria,1MU48@1224|Proteobacteria,42MF6@68525|delta/epsilon subdivisions,2MTNI@213481|Bdellovibrionales,2WJ8D@28221|Deltaproteobacteria	213481|Bdellovibrionales	V	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family	-	-	-	ko:K03296	-	-	-	-	ko00000	2.A.6.2	-	-	ACR_tran
DYD3_k127_6761502_3	1184267.A11Q_1741	2.948e-158	511.0	COG1538@1|root,COG1538@2|Bacteria,1PZ5P@1224|Proteobacteria,43EAD@68525|delta/epsilon subdivisions,2MTP2@213481|Bdellovibrionales,2X05F@28221|Deltaproteobacteria	213481|Bdellovibrionales	MU	Outer membrane efflux protein	-	-	-	-	-	-	-	-	-	-	-	-	OEP
DYD3_k127_6761502_12	264462.Bd3060	4.891e-27	118.0	COG1309@1|root,COG1309@2|Bacteria,1NB8D@1224|Proteobacteria,437M4@68525|delta/epsilon subdivisions,2MU38@213481|Bdellovibrionales,2X2V6@28221|Deltaproteobacteria	213481|Bdellovibrionales	K	transcriptional regulator	-	-	-	-	-	-	-	-	-	-	-	-	TetR_N
DYD3_k127_6761502_8	1121405.dsmv_1693	6.192e-54	196.0	COG1765@1|root,COG1765@2|Bacteria,1MWPR@1224|Proteobacteria,42S3G@68525|delta/epsilon subdivisions,2WNET@28221|Deltaproteobacteria,2MMB5@213118|Desulfobacterales	28221|Deltaproteobacteria	O	OsmC-like protein	-	-	-	-	-	-	-	-	-	-	-	-	OsmC
DYD3_k127_6761502_18	264462.Bd2838	1.046e-13	78.0	COG5002@1|root,COG5002@2|Bacteria	2|Bacteria	T	protein histidine kinase activity	-	-	-	ko:K03281	-	-	-	-	ko00000	2.A.49	-	-	HATPase_c,HisKA,HisKA_7TM,Response_reg,SSF
DYD3_k127_6773414_0	1353529.M899_3084	5.827e-130	446.0	COG0643@1|root,COG0643@2|Bacteria,1R7CN@1224|Proteobacteria,42PXU@68525|delta/epsilon subdivisions,2WMJW@28221|Deltaproteobacteria	28221|Deltaproteobacteria	NT	Histidine kinase-like ATPases	-	-	2.7.13.3	ko:K03407	ko02020,ko02030,map02020,map02030	M00506	-	-	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022,ko02035	-	-	-	HATPase_c,Hpt,NIT
DYD3_k127_6773414_7	1353529.M899_3080	3.198e-06	55.0	COG1652@1|root,COG1652@2|Bacteria,1MZXQ@1224|Proteobacteria,42V2G@68525|delta/epsilon subdivisions	1224|Proteobacteria	S	LysM domain	-	-	-	-	-	-	-	-	-	-	-	-	LysM
DYD3_k127_6773414_4	765869.BDW_08910	1.755e-23	104.0	COG2199@1|root,COG3706@2|Bacteria,1N0N3@1224|Proteobacteria,43E7J@68525|delta/epsilon subdivisions,2MU1T@213481|Bdellovibrionales,2X7JX@28221|Deltaproteobacteria	213481|Bdellovibrionales	T	cheY-homologous receiver domain	-	-	-	ko:K03413	ko02020,ko02030,map02020,map02030	M00506	-	-	ko00000,ko00001,ko00002,ko02022,ko02035	-	-	-	Response_reg
DYD3_k127_6773414_6	1138822.PL11_02490	4.351e-09	66.0	2AYWY@1|root,3354X@2|Bacteria,1VUSY@1239|Firmicutes,4HVEY@91061|Bacilli,3FC0S@33958|Lactobacillaceae	91061|Bacilli	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_6773414_5	1122185.N792_08605	3.217e-18	97.0	2AYWY@1|root,3354X@2|Bacteria,1NC5C@1224|Proteobacteria,1SNNY@1236|Gammaproteobacteria,1XAJ2@135614|Xanthomonadales	135614|Xanthomonadales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_6773414_2	31033.ENSTRUP00000021196	7.36e-47	179.0	KOG1971@1|root,KOG1971@2759|Eukaryota,38DIW@33154|Opisthokonta,3BCUS@33208|Metazoa,3CS3C@33213|Bilateria,47Z5G@7711|Chordata,48XG2@7742|Vertebrata,49WCN@7898|Actinopterygii	33208|Metazoa	O	Procollagen-lysine 1, 2-oxoglutarate 5-dioxygenase 1a	PLOD1	GO:0000003,GO:0001666,GO:0003006,GO:0003674,GO:0003824,GO:0003980,GO:0005488,GO:0005506,GO:0005515,GO:0005575,GO:0005576,GO:0005615,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005789,GO:0005791,GO:0006011,GO:0006082,GO:0006139,GO:0006464,GO:0006486,GO:0006520,GO:0006575,GO:0006725,GO:0006793,GO:0006807,GO:0006950,GO:0007276,GO:0007281,GO:0007292,GO:0007295,GO:0008150,GO:0008152,GO:0008194,GO:0008198,GO:0008475,GO:0008544,GO:0008652,GO:0009058,GO:0009059,GO:0009066,GO:0009067,GO:0009100,GO:0009101,GO:0009225,GO:0009628,GO:0009719,GO:0009725,GO:0009888,GO:0009987,GO:0010033,GO:0012505,GO:0016020,GO:0016053,GO:0016491,GO:0016705,GO:0016706,GO:0016740,GO:0016757,GO:0016758,GO:0017185,GO:0018126,GO:0018193,GO:0018205,GO:0019538,GO:0019752,GO:0019842,GO:0019953,GO:0022412,GO:0022414,GO:0030154,GO:0030246,GO:0030867,GO:0031090,GO:0031406,GO:0031418,GO:0031984,GO:0032501,GO:0032502,GO:0032504,GO:0032870,GO:0032963,GO:0032964,GO:0032991,GO:0033218,GO:0034641,GO:0034645,GO:0035251,GO:0036094,GO:0036211,GO:0036293,GO:0040007,GO:0042175,GO:0042221,GO:0042277,GO:0042398,GO:0042802,GO:0042803,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0043177,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0043413,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044281,GO:0044283,GO:0044421,GO:0044422,GO:0044424,GO:0044425,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0044703,GO:0046394,GO:0046483,GO:0046527,GO:0046872,GO:0046914,GO:0046946,GO:0046947,GO:0046983,GO:0048029,GO:0048037,GO:0048468,GO:0048471,GO:0048477,GO:0048589,GO:0048609,GO:0048856,GO:0048869,GO:0050662,GO:0050896,GO:0051213,GO:0051704,GO:0051716,GO:0055086,GO:0055114,GO:0070085,GO:0070482,GO:0070815,GO:0070887,GO:0071310,GO:0071495,GO:0071704,GO:0097359,GO:0098588,GO:0098827,GO:0140096,GO:1901135,GO:1901137,GO:1901360,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607,GO:1902494	1.14.11.4,2.4.1.50,2.4.1.66	ko:K00473,ko:K13645,ko:K13646,ko:K13647,ko:K15174	ko00310,ko00514,ko04011,map00310,map00514,map04011	-	R03376,R03380,R04491	RC00005,RC00049,RC00397,RC00709	ko00000,ko00001,ko01000,ko01003,ko03021,ko04147	-	-	-	2OG-FeII_Oxy
DYD3_k127_6775115_3	379066.GAU_0535	1.692e-76	262.0	COG0177@1|root,COG0177@2|Bacteria,1ZT7K@142182|Gemmatimonadetes	142182|Gemmatimonadetes	L	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate	nth	-	4.2.99.18	ko:K10773	ko03410,map03410	-	-	-	ko00000,ko00001,ko01000,ko03400	-	-	-	EndIII_4Fe-2S,HhH-GPD
DYD3_k127_6775115_1	1353529.M899_0111	1.7e-86	290.0	COG0293@1|root,COG0293@2|Bacteria,1MW1C@1224|Proteobacteria,42T4F@68525|delta/epsilon subdivisions,2MSZM@213481|Bdellovibrionales,2WP6B@28221|Deltaproteobacteria	213481|Bdellovibrionales	J	Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit	ftsJ	-	2.1.1.166	ko:K02427	-	-	-	-	ko00000,ko01000,ko03009	-	-	-	FtsJ
DYD3_k127_6775115_0	862908.BMS_0103	1.616e-104	354.0	COG0768@1|root,COG0768@2|Bacteria,1R7A0@1224|Proteobacteria,42MJC@68525|delta/epsilon subdivisions,2MSY2@213481|Bdellovibrionales,2WJZ2@28221|Deltaproteobacteria	213481|Bdellovibrionales	M	penicillin-binding protein	pbp4	-	-	-	-	-	-	-	-	-	-	-	Transpeptidase
DYD3_k127_6775115_2	1353529.M899_0114	2.688e-81	278.0	COG0681@1|root,COG0681@2|Bacteria,1MXUF@1224|Proteobacteria,42NJE@68525|delta/epsilon subdivisions,2MT3R@213481|Bdellovibrionales,2WKMA@28221|Deltaproteobacteria	213481|Bdellovibrionales	U	Belongs to the peptidase S26 family	lepB_2	-	3.4.21.89	ko:K03100	ko02024,ko03060,map02024,map03060	-	-	-	ko00000,ko00001,ko01000,ko01002	-	-	-	Peptidase_S24,Peptidase_S26
DYD3_k127_6781432_7	1201288.M900_1234	7.722e-33	135.0	COG0513@1|root,COG0513@2|Bacteria,1NUZU@1224|Proteobacteria,42ZQT@68525|delta/epsilon subdivisions,2MTUN@213481|Bdellovibrionales,2WUYJ@28221|Deltaproteobacteria	213481|Bdellovibrionales	JKL	helicase superfamily c-terminal domain	-	-	-	-	-	-	-	-	-	-	-	-	DEAD,Helicase_C
DYD3_k127_6781432_12	545695.TREAZ_2093	2.683e-08	66.0	2B518@1|root,31XUG@2|Bacteria,2JAMI@203691|Spirochaetes	203691|Spirochaetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_6781432_9	1172562.HCN_1935	1.348e-10	68.0	COG1525@1|root,COG1525@2|Bacteria,1N145@1224|Proteobacteria,42SG5@68525|delta/epsilon subdivisions,2YPIZ@29547|Epsilonproteobacteria	29547|Epsilonproteobacteria	L	Staphylococcal nuclease homologues	-	-	3.1.31.1	ko:K01174	-	-	-	-	ko00000,ko01000	-	-	-	SNase
DYD3_k127_6781432_0	1201290.M902_3262	1.873e-194	613.0	COG0343@1|root,COG0343@2|Bacteria,1MUCA@1224|Proteobacteria,42M5Y@68525|delta/epsilon subdivisions,2MSR7@213481|Bdellovibrionales,2WIMT@28221|Deltaproteobacteria	213481|Bdellovibrionales	J	Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine)	tgt-1	-	2.4.2.29	ko:K00773	-	-	R03789,R10209	RC00063	ko00000,ko01000,ko03016	-	-	-	TGT
DYD3_k127_6781432_13	765869.BDW_00845	0.0008437	50.0	2EJYA@1|root,33DNX@2|Bacteria,1NTYZ@1224|Proteobacteria,432JI@68525|delta/epsilon subdivisions,2MUKC@213481|Bdellovibrionales,2WY9T@28221|Deltaproteobacteria	213481|Bdellovibrionales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_6781432_11	1123234.AUKI01000019_gene533	1.873e-08	64.0	2AYWY@1|root,3354X@2|Bacteria	2|Bacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_6781432_6	796620.VIBC2010_11849	1.063e-33	145.0	2C5PI@1|root,333MN@2|Bacteria,1R6UK@1224|Proteobacteria,1RYYP@1236|Gammaproteobacteria,1XWPT@135623|Vibrionales	135623|Vibrionales	S	Transglutaminase elicitor	-	-	-	-	-	-	-	-	-	-	-	-	Ricin_B_lectin,TGase_elicitor
DYD3_k127_6781432_1	1201288.M900_1240	1.871e-151	486.0	COG1932@1|root,COG1932@2|Bacteria,1MUB5@1224|Proteobacteria	1224|Proteobacteria	E	Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine	serC	-	2.6.1.52	ko:K00831	ko00260,ko00680,ko00750,ko01100,ko01120,ko01130,ko01200,ko01230,map00260,map00680,map00750,map01100,map01120,map01130,map01200,map01230	M00020,M00124	R04173,R05085	RC00006,RC00036	ko00000,ko00001,ko00002,ko01000,ko01007	-	-	-	Aminotran_5
DYD3_k127_6781432_5	1201288.M900_1242	9.051e-38	154.0	COG5549@1|root,COG5549@2|Bacteria	2|Bacteria	O	protein import	-	-	-	-	-	-	-	-	-	-	-	-	Peptidase_M10,Reprolysin_3
DYD3_k127_6781432_2	862908.BMS_2224	3.06e-145	481.0	COG0006@1|root,COG0006@2|Bacteria,1MUZS@1224|Proteobacteria,42M1K@68525|delta/epsilon subdivisions,2WJ8E@28221|Deltaproteobacteria	28221|Deltaproteobacteria	E	PFAM peptidase M24	pepQ	-	3.4.11.9,3.4.13.9	ko:K01262,ko:K01271	-	-	-	-	ko00000,ko01000,ko01002	-	-	-	Creatinase_N,Creatinase_N_2,Peptidase_M24,Peptidase_M24_C
DYD3_k127_6781432_3	1120953.AUBH01000003_gene1981	1.054e-126	415.0	COG3483@1|root,COG3483@2|Bacteria,1MW68@1224|Proteobacteria,1RXYM@1236|Gammaproteobacteria,4669G@72275|Alteromonadaceae	1236|Gammaproteobacteria	E	Heme-dependent dioxygenase that catalyzes the oxidative cleavage of the L-tryptophan (L-Trp) pyrrole ring and converts L- tryptophan to N-formyl-L-kynurenine. Catalyzes the oxidative cleavage of the indole moiety	kynA	GO:0003674,GO:0003824,GO:0004833,GO:0005488,GO:0006082,GO:0006084,GO:0006139,GO:0006163,GO:0006520,GO:0006568,GO:0006569,GO:0006576,GO:0006586,GO:0006637,GO:0006725,GO:0006732,GO:0006753,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009063,GO:0009072,GO:0009074,GO:0009117,GO:0009150,GO:0009259,GO:0009308,GO:0009310,GO:0009987,GO:0016043,GO:0016054,GO:0016491,GO:0016701,GO:0016702,GO:0019439,GO:0019441,GO:0019442,GO:0019637,GO:0019693,GO:0019752,GO:0020037,GO:0022607,GO:0033865,GO:0033875,GO:0034032,GO:0034641,GO:0035383,GO:0042180,GO:0042402,GO:0042430,GO:0042436,GO:0042537,GO:0043436,GO:0043603,GO:0043933,GO:0044085,GO:0044106,GO:0044237,GO:0044238,GO:0044248,GO:0044270,GO:0044281,GO:0044282,GO:0046218,GO:0046395,GO:0046483,GO:0046700,GO:0046906,GO:0048037,GO:0051186,GO:0051213,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0055086,GO:0055114,GO:0065003,GO:0070189,GO:0071704,GO:0071840,GO:0072521,GO:0097159,GO:1901135,GO:1901360,GO:1901361,GO:1901363,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606	1.13.11.11	ko:K00453	ko00380,ko01100,map00380,map01100	M00038	R00678	RC00356	ko00000,ko00001,ko00002,ko01000	-	-	-	Trp_dioxygenase
DYD3_k127_6781432_4	1184267.A11Q_1035	1.536e-47	178.0	COG0520@1|root,COG0520@2|Bacteria,1Q61V@1224|Proteobacteria,42Y6K@68525|delta/epsilon subdivisions,2MSTN@213481|Bdellovibrionales,2WTM3@28221|Deltaproteobacteria	213481|Bdellovibrionales	E	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine	-	-	3.7.1.3	ko:K01556	ko00380,ko01100,map00380,map01100	M00038	R00987,R02668,R03936	RC00284,RC00415	ko00000,ko00001,ko00002,ko01000	-	-	-	Aminotran_5
DYD3_k127_6821796_1	862908.BMS_1106	8.499e-74	256.0	COG2999@1|root,COG2999@2|Bacteria	2|Bacteria	O	glutathione oxidoreductase activity	grxB	GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0008152,GO:0015036,GO:0015037,GO:0015038,GO:0016491,GO:0016667,GO:0044424,GO:0044444,GO:0044464,GO:0055114	-	ko:K03675	-	-	-	-	ko00000,ko03110	-	-	iAF1260.b1064,iAPECO1_1312.APECO1_146,iB21_1397.B21_01068,iBWG_1329.BWG_0912,iEC042_1314.EC042_1131,iEC55989_1330.EC55989_1177,iECABU_c1320.ECABU_c12780,iECBD_1354.ECBD_2536,iECB_1328.ECB_01060,iECDH1ME8569_1439.ECDH1ME8569_0999,iECD_1391.ECD_01060,iECED1_1282.ECED1_1208,iECH74115_1262.ECH74115_1443,iECIAI1_1343.ECIAI1_1099,iECIAI39_1322.ECIAI39_2099,iECNA114_1301.ECNA114_1122,iECOK1_1307.ECOK1_1172,iECP_1309.ECP_1056,iECS88_1305.ECS88_1078,iECSE_1348.ECSE_1127,iECSF_1327.ECSF_0963,iECSP_1301.ECSP_1365,iECUMN_1333.ECUMN_1238,iECW_1372.ECW_m1171,iECs_1301.ECs1442,iEKO11_1354.EKO11_2769,iETEC_1333.ETEC_1129,iEcDH1_1363.EcDH1_2582,iEcE24377_1341.EcE24377A_1187,iEcHS_1320.EcHS_A1187,iEcSMS35_1347.EcSMS35_2065,iEcolC_1368.EcolC_2536,iG2583_1286.G2583_1323,iJO1366.b1064,iLF82_1304.LF82_0927,iNRG857_1313.NRG857_05130,iSBO_1134.SBO_2000,iSSON_1240.SSON_1084,iSbBS512_1146.SbBS512_E2262,iUMN146_1321.UM146_12010,iUMNK88_1353.UMNK88_1331,iUTI89_1310.UTI89_C1189,iWFL_1372.ECW_m1171,iY75_1357.Y75_RS05565,iZ_1308.Z1701,ic_1306.c1331	GST_N_3,Glutaredoxin2_C
DYD3_k127_6821796_4	1089553.Tph_c14260	7.842e-08	62.0	COG1716@1|root,COG1716@2|Bacteria,1V5U0@1239|Firmicutes,24IDE@186801|Clostridia,42H0N@68295|Thermoanaerobacterales	186801|Clostridia	T	Protein of unknown function (DUF2662)	-	-	-	-	-	-	-	-	-	-	-	-	DUF3662,Yop-YscD_cpl
DYD3_k127_6821796_3	1353529.M899_3447	3.212e-55	199.0	COG2096@1|root,COG2096@2|Bacteria,1RDUF@1224|Proteobacteria,42TN4@68525|delta/epsilon subdivisions,2MT42@213481|Bdellovibrionales,2WQ0Q@28221|Deltaproteobacteria	213481|Bdellovibrionales	S	Cobalamin adenosyltransferase	-	-	2.5.1.17	ko:K00798	ko00860,ko01100,map00860,map01100	M00122	R01492,R05220,R07268	RC00533	ko00000,ko00001,ko00002,ko01000	-	-	-	Cob_adeno_trans
DYD3_k127_6821796_0	862908.BMS_3379	0.0	1543.0	COG1703@1|root,COG1842@1|root,COG1884@1|root,COG2185@1|root,COG1703@2|Bacteria,COG1842@2|Bacteria,COG1884@2|Bacteria,COG2185@2|Bacteria,1MUXX@1224|Proteobacteria,42MVK@68525|delta/epsilon subdivisions,2MSP3@213481|Bdellovibrionales,2WKEN@28221|Deltaproteobacteria	213481|Bdellovibrionales	EI	Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly	icmF	-	5.4.99.13	ko:K11942	-	-	-	-	ko00000,ko01000	-	-	-	ArgK,B12-binding,MM_CoA_mutase
DYD3_k127_6821796_2	1353529.M899_3450	5.503e-63	219.0	COG1143@1|root,COG1143@2|Bacteria	2|Bacteria	C	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient	-	-	-	-	-	-	-	-	-	-	-	-	Fer4,Fer4_7
DYD3_k127_6895467_49	264462.Bd2856	1.314e-16	82.0	COG1289@1|root,COG1289@2|Bacteria	2|Bacteria	S	transmembrane transporter activity	-	-	-	-	-	-	-	-	-	-	-	-	FUSC_2
DYD3_k127_6895467_37	1201288.M900_1021	2.139e-34	136.0	COG0724@1|root,COG0724@2|Bacteria,1N6VR@1224|Proteobacteria,42UQP@68525|delta/epsilon subdivisions,2MU6W@213481|Bdellovibrionales,2WQKU@28221|Deltaproteobacteria	213481|Bdellovibrionales	S	PFAM RNA recognition motif	-	-	-	-	-	-	-	-	-	-	-	-	RRM_1
DYD3_k127_6895467_40	1201288.M900_1021	3.286e-30	124.0	COG0724@1|root,COG0724@2|Bacteria,1N6VR@1224|Proteobacteria,42UQP@68525|delta/epsilon subdivisions,2MU6W@213481|Bdellovibrionales,2WQKU@28221|Deltaproteobacteria	213481|Bdellovibrionales	S	PFAM RNA recognition motif	-	-	-	-	-	-	-	-	-	-	-	-	RRM_1
DYD3_k127_6895467_8	756067.MicvaDRAFT_3328	4.238e-101	337.0	COG0491@1|root,COG0491@2|Bacteria,1G0J0@1117|Cyanobacteria,1H75K@1150|Oscillatoriales	1117|Cyanobacteria	S	Metallo-beta-lactamase superfamily	-	-	-	-	-	-	-	-	-	-	-	-	Lactamase_B
DYD3_k127_6895467_11	215803.DB30_8776	2.192e-95	323.0	COG1236@1|root,COG1236@2|Bacteria,1MV7U@1224|Proteobacteria,438DY@68525|delta/epsilon subdivisions,2X1Z2@28221|Deltaproteobacteria,2YWQN@29|Myxococcales	28221|Deltaproteobacteria	J	Exonuclease of the beta-lactamase fold involved in RNA processing	-	-	-	ko:K07577	-	-	-	-	ko00000	-	-	-	-
DYD3_k127_6895467_0	1232410.KI421424_gene1630	8.017e-277	872.0	COG1199@1|root,COG1199@2|Bacteria,1MVRJ@1224|Proteobacteria,42NV8@68525|delta/epsilon subdivisions,2WJIW@28221|Deltaproteobacteria,43TMV@69541|Desulfuromonadales	28221|Deltaproteobacteria	L	DEAD_2	-	-	3.6.4.12	ko:K10844	ko03022,ko03420,map03022,map03420	M00290	-	-	ko00000,ko00001,ko00002,ko01000,ko03021,ko03400	-	-	-	DEAD,DEAD_2,Helicase_C_2
DYD3_k127_6895467_6	63737.Npun_R4697	7.029e-115	379.0	COG4638@1|root,COG4638@2|Bacteria,1G2UQ@1117|Cyanobacteria,1HM5N@1161|Nostocales	1117|Cyanobacteria	P	PFAM Rieske 2Fe-2S domain	hcaE	-	-	ko:K19982	ko00404,ko01130,map00404,map01130	M00790	R11107	RC01333	ko00000,ko00001,ko00002,ko01000	-	-	-	PaO,Rieske
DYD3_k127_6895467_19	862908.BMS_1808	2.707e-56	205.0	2DBEV@1|root,2Z8UT@2|Bacteria,1REZM@1224|Proteobacteria,43BHM@68525|delta/epsilon subdivisions,2X6W3@28221|Deltaproteobacteria	28221|Deltaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_6895467_27	929703.KE386492_gene4283	3.984e-45	174.0	COG4221@1|root,COG4221@2|Bacteria,4NIGS@976|Bacteroidetes,47K7A@768503|Cytophagia	976|Bacteroidetes	S	Belongs to the short-chain dehydrogenases reductases (SDR) family	-	-	-	-	-	-	-	-	-	-	-	-	adh_short
DYD3_k127_6895467_36	862908.BMS_1807	8.406e-37	152.0	COG1633@1|root,COG1633@2|Bacteria	2|Bacteria	S	Catalyzes the formation of the isocyclic ring in chlorophyll biosynthesis. Mediates the cyclase reaction, which results in the formation of divinylprotochlorophyllide (Pchlide) characteristic of all chlorophylls from magnesium-protoporphyrin IX 13-monomethyl ester (MgPMME)	-	-	1.14.19.11,1.14.19.2,1.14.19.26,1.16.3.1	ko:K03594,ko:K03921	ko00061,ko00860,ko01040,ko01212,map00061,map00860,map01040,map01212	-	R00078,R03370,R08161,R11108,R11109	RC00917,RC02758	ko00000,ko00001,ko01000,ko01004	-	-	-	AurF,DUF2383,Ferritin,Ferritin-like,Rubrerythrin
DYD3_k127_6895467_14	102129.Lepto7375DRAFT_4325	5.54e-78	278.0	COG0318@1|root,COG0318@2|Bacteria,1G2WI@1117|Cyanobacteria,1HA1G@1150|Oscillatoriales	1117|Cyanobacteria	IQ	GH3 auxin-responsive promoter	-	-	-	-	-	-	-	-	-	-	-	-	GH3
DYD3_k127_6895467_24	1173022.Cri9333_2214	9.528e-48	178.0	COG0110@1|root,COG0110@2|Bacteria,1G216@1117|Cyanobacteria,1HAZ5@1150|Oscillatoriales	1117|Cyanobacteria	S	PFAM Bacterial transferase hexapeptide (three repeats)	-	-	-	-	-	-	-	-	-	-	-	-	Hexapep
DYD3_k127_6895467_22	373994.Riv7116_5957	1.699e-52	194.0	COG3000@1|root,COG3000@2|Bacteria,1G1V1@1117|Cyanobacteria,1HIC0@1161|Nostocales	1117|Cyanobacteria	I	PFAM Fatty acid hydroxylase superfamily	-	-	-	-	-	-	-	-	-	-	-	-	FA_hydroxylase
DYD3_k127_6895467_5	56110.Oscil6304_0054	1.047e-126	413.0	COG4638@1|root,COG4638@2|Bacteria,1G4D2@1117|Cyanobacteria,1H9EV@1150|Oscillatoriales	1117|Cyanobacteria	P	Ring-hydroxylating dioxygenase, large terminal subunit	pobA	-	-	-	-	-	-	-	-	-	-	-	Rieske
DYD3_k127_6895467_44	63737.Npun_R4692	2.879e-22	98.0	COG0633@1|root,COG0633@2|Bacteria,1G9YN@1117|Cyanobacteria,1HPS7@1161|Nostocales	1117|Cyanobacteria	C	PFAM 2Fe-2S iron-sulfur cluster binding domain	-	-	-	-	-	-	-	-	-	-	-	-	Fer2
DYD3_k127_6895467_3	32057.KB217478_gene4516	7.587e-152	489.0	28ISX@1|root,2Z8S0@2|Bacteria,1G2RE@1117|Cyanobacteria,1HKIF@1161|Nostocales	1117|Cyanobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_6895467_7	862908.BMS_1809	5.406e-105	351.0	COG4638@1|root,COG4638@2|Bacteria,1MX47@1224|Proteobacteria,43B31@68525|delta/epsilon subdivisions,2MT6W@213481|Bdellovibrionales,2X6GT@28221|Deltaproteobacteria	213481|Bdellovibrionales	P	Rieske [2Fe-2S] domain	-	-	-	-	-	-	-	-	-	-	-	-	Rieske
DYD3_k127_6895467_42	243365.CV_4105	8.333e-28	119.0	COG3758@1|root,COG3758@2|Bacteria,1RH9G@1224|Proteobacteria,2VVAA@28216|Betaproteobacteria,2KTFQ@206351|Neisseriales	206351|Neisseriales	S	HutD	-	-	-	ko:K09975	-	-	-	-	ko00000	-	-	-	HutD
DYD3_k127_6895467_29	1283300.ATXB01000001_gene758	8.444e-43	160.0	COG0494@1|root,COG0494@2|Bacteria,1MYSK@1224|Proteobacteria,1SB8U@1236|Gammaproteobacteria	1236|Gammaproteobacteria	L	Belongs to the Nudix hydrolase family	-	-	3.6.1.17	ko:K01518	ko00230,ko00240,map00230,map00240	-	R00184,R00969,R01232,R02805	RC00002	ko00000,ko00001,ko01000	-	-	-	NUDIX
DYD3_k127_6895467_51	316055.RPE_0302	7.458e-15	81.0	COG1514@1|root,COG1514@2|Bacteria,1RDB2@1224|Proteobacteria,2U7FV@28211|Alphaproteobacteria,3JTFI@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	J	Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester	ligT	-	3.1.4.58	ko:K01975	-	-	-	-	ko00000,ko01000,ko03016	-	-	-	LigT_PEase
DYD3_k127_6895467_50	1201288.M900_1670	3.443e-15	79.0	COG2197@1|root,COG2197@2|Bacteria,1R2UT@1224|Proteobacteria,4311N@68525|delta/epsilon subdivisions,2MU9T@213481|Bdellovibrionales,2WWSQ@28221|Deltaproteobacteria	2|Bacteria	KT	cheY-homologous receiver domain	-	-	-	ko:K03413	ko02020,ko02030,map02020,map02030	M00506	-	-	ko00000,ko00001,ko00002,ko02022,ko02035	-	-	-	GerE,Response_reg
DYD3_k127_6895467_34	1185876.BN8_03727	2.719e-39	168.0	COG4191@1|root,COG4191@2|Bacteria,4NEJX@976|Bacteroidetes,47MSQ@768503|Cytophagia	976|Bacteroidetes	T	Histidine kinase	-	-	-	-	-	-	-	-	-	-	-	-	7TMR-DISMED2,7TMR-DISM_7TM,HATPase_c,HisKA
DYD3_k127_6895467_10	671143.DAMO_1821	1.862e-97	329.0	COG2201@1|root,COG2201@2|Bacteria,2NNUY@2323|unclassified Bacteria	2|Bacteria	NT	catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR	cheB	-	3.1.1.61,3.5.1.44	ko:K03412	ko02020,ko02030,map02020,map02030	M00506	-	-	ko00000,ko00001,ko00002,ko01000,ko02022,ko02035	-	-	-	CheB_methylest,Response_reg
DYD3_k127_6895467_16	264462.Bd3468	4.333e-60	218.0	COG1352@1|root,COG1352@2|Bacteria,1MU6W@1224|Proteobacteria,42MR2@68525|delta/epsilon subdivisions,2MUPQ@213481|Bdellovibrionales,2WIPD@28221|Deltaproteobacteria	213481|Bdellovibrionales	H	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP	cheR36H	-	2.1.1.80	ko:K00575	ko02020,ko02030,map02020,map02030	-	-	-	ko00000,ko00001,ko01000,ko02035	-	-	-	CheR,CheR_N
DYD3_k127_6895467_9	765869.BDW_12850	7.421e-100	349.0	COG0643@1|root,COG2198@1|root,COG0643@2|Bacteria,COG2198@2|Bacteria,1MUAG@1224|Proteobacteria,42M6Q@68525|delta/epsilon subdivisions,2MSWD@213481|Bdellovibrionales,2WJ5U@28221|Deltaproteobacteria	213481|Bdellovibrionales	T	Signal transducing histidine kinase homodimeric	-	-	2.7.13.3	ko:K03407	ko02020,ko02030,map02020,map02030	M00506	-	-	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022,ko02035	-	-	-	CheW,H-kinase_dim,HATPase_c,Hpt
DYD3_k127_6895467_35	264462.Bd3471	1.218e-38	149.0	COG0835@1|root,COG0835@2|Bacteria,1RAH1@1224|Proteobacteria,42TN2@68525|delta/epsilon subdivisions,2MUNU@213481|Bdellovibrionales,2WR0G@28221|Deltaproteobacteria	213481|Bdellovibrionales	NT	Two component signalling adaptor domain	-	-	-	ko:K03408	ko02020,ko02030,map02020,map02030	-	-	-	ko00000,ko00001,ko02035	-	-	-	CheW
DYD3_k127_6895467_28	269798.CHU_0105	1.742e-43	166.0	COG2197@1|root,COG2197@2|Bacteria,4NKX7@976|Bacteroidetes,47QZF@768503|Cytophagia	976|Bacteroidetes	K	helix_turn_helix, Lux Regulon	-	-	-	-	-	-	-	-	-	-	-	-	GerE,Response_reg
DYD3_k127_6895467_39	1408473.JHXO01000005_gene1604	7.473e-33	145.0	COG4585@1|root,COG4585@2|Bacteria,4NSJY@976|Bacteroidetes,2FQSP@200643|Bacteroidia	976|Bacteroidetes	T	Psort location CytoplasmicMembrane, score	-	-	-	-	-	-	-	-	-	-	-	-	HATPase_c,HisKA_3
DYD3_k127_6895467_56	264462.Bd2596	1.312e-08	61.0	COG0840@1|root,COG0840@2|Bacteria,1MU9B@1224|Proteobacteria,42M22@68525|delta/epsilon subdivisions,2WM8F@28221|Deltaproteobacteria	28221|Deltaproteobacteria	NT	Chemotaxis sensory transducer	mcp64H-1	-	-	ko:K03406	ko02020,ko02030,map02020,map02030	-	-	-	ko00000,ko00001,ko02035	-	-	-	4HB_MCP_1,HAMP,MCPsignal,PAS_4,dCache_1
DYD3_k127_6895467_31	1184267.A11Q_305	4.26e-41	155.0	COG2199@1|root,COG3706@2|Bacteria,1N0N3@1224|Proteobacteria,43E7J@68525|delta/epsilon subdivisions,2MU1T@213481|Bdellovibrionales,2X7JX@28221|Deltaproteobacteria	213481|Bdellovibrionales	T	cheY-homologous receiver domain	-	-	-	ko:K03413	ko02020,ko02030,map02020,map02030	M00506	-	-	ko00000,ko00001,ko00002,ko02022,ko02035	-	-	-	Response_reg
DYD3_k127_6895467_45	289376.THEYE_A1534	5.923e-20	103.0	COG2206@1|root,COG2206@2|Bacteria,3J14V@40117|Nitrospirae	40117|Nitrospirae	T	Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology	-	-	-	-	-	-	-	-	-	-	-	-	DUF3391,HD
DYD3_k127_6895467_33	1184267.A11Q_303	2.274e-39	157.0	COG1406@1|root,COG1406@2|Bacteria,1RATZ@1224|Proteobacteria,42R2Q@68525|delta/epsilon subdivisions,2MU8P@213481|Bdellovibrionales,2WP6F@28221|Deltaproteobacteria	213481|Bdellovibrionales	N	PFAM CheC domain protein	-	-	-	ko:K03409	ko02030,map02030	-	-	-	ko00000,ko00001,ko02035	-	-	-	CheX
DYD3_k127_6895467_17	264462.Bd0260	7.036e-58	211.0	COG4313@1|root,COG4313@2|Bacteria,1NW7I@1224|Proteobacteria,42ZUG@68525|delta/epsilon subdivisions,2WVAI@28221|Deltaproteobacteria	28221|Deltaproteobacteria	C	Putative MetA-pathway of phenol degradation	-	-	-	-	-	-	-	-	-	-	-	-	Phenol_MetA_deg
DYD3_k127_6895467_47	1353529.M899_0417	5.905e-17	90.0	COG0784@1|root,COG2206@1|root,COG0784@2|Bacteria,COG2206@2|Bacteria	2|Bacteria	T	PFAM metal-dependent phosphohydrolase, HD sub domain	cnpD3	-	3.6.1.11,3.6.1.40	ko:K01524,ko:K07016	ko00230,map00230	-	R03409	RC00002	ko00000,ko00001,ko01000,ko02048	-	-	-	HD,HD_5,Response_reg
DYD3_k127_6895467_30	1120972.AUMH01000004_gene1401	2.856e-41	159.0	COG2039@1|root,COG2039@2|Bacteria,1TRRX@1239|Firmicutes,4HCIJ@91061|Bacilli	91061|Bacilli	O	Removes 5-oxoproline from various penultimate amino acid residues except L-proline	pcp	GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0019538,GO:0043170,GO:0044238,GO:0044424,GO:0044464,GO:0071704,GO:1901564	3.4.19.3	ko:K01304	-	-	-	-	ko00000,ko01000,ko01002	-	-	-	Peptidase_C15
DYD3_k127_6895467_12	1353529.M899_0372	3.603e-82	279.0	COG0664@1|root,COG0664@2|Bacteria,1MZZD@1224|Proteobacteria,42QUX@68525|delta/epsilon subdivisions,2MT5W@213481|Bdellovibrionales,2WMWV@28221|Deltaproteobacteria	213481|Bdellovibrionales	K	PFAM Cyclic nucleotide-binding	-	-	-	ko:K10914	ko02020,ko02024,ko02025,ko02026,ko05111,map02020,map02024,map02025,map02026,map05111	-	-	-	ko00000,ko00001,ko03000	-	-	-	HTH_Crp_2,cNMP_binding
DYD3_k127_6895467_4	264462.Bd1322	4.714e-127	420.0	COG0840@1|root,COG0840@2|Bacteria,1MU9B@1224|Proteobacteria,42UQ6@68525|delta/epsilon subdivisions,2MTWD@213481|Bdellovibrionales,2WV26@28221|Deltaproteobacteria	213481|Bdellovibrionales	NT	PAS fold	-	-	-	ko:K03776	ko02020,ko02030,map02020,map02030	-	-	-	ko00000,ko00001,ko02035	-	-	-	PAS_3
DYD3_k127_6895467_2	1123234.AUKI01000022_gene2233	9.641e-187	601.0	COG1626@1|root,COG1626@2|Bacteria,4NFJW@976|Bacteroidetes,1HY79@117743|Flavobacteriia	976|Bacteroidetes	G	Trehalase	treA	-	3.2.1.28	ko:K01194	ko00500,ko01100,map00500,map01100	-	R00010	RC00049	ko00000,ko00001,ko00537,ko01000	-	GH37	-	Trehalase,Trehalase_Ca-bi
DYD3_k127_6895467_46	378806.STAUR_8253	1.013e-17	87.0	COG0784@1|root,COG0784@2|Bacteria,1QA59@1224|Proteobacteria,434UR@68525|delta/epsilon subdivisions,2WZ5U@28221|Deltaproteobacteria,2Z1E0@29|Myxococcales	28221|Deltaproteobacteria	T	cheY-homologous receiver domain	-	-	-	-	-	-	-	-	-	-	-	-	Response_reg
DYD3_k127_6895467_26	319795.Dgeo_2170	3.98e-47	171.0	COG2076@1|root,COG2076@2|Bacteria,1WMRH@1297|Deinococcus-Thermus	1297|Deinococcus-Thermus	P	Small Multidrug Resistance protein	-	-	-	ko:K11741	-	-	-	-	ko00000,ko02000	2.A.7.1	-	-	Multi_Drug_Res
DYD3_k127_6895467_18	1201288.M900_A0068	7.678e-57	202.0	COG3040@1|root,COG3040@2|Bacteria,1N0MF@1224|Proteobacteria,42RI0@68525|delta/epsilon subdivisions	1224|Proteobacteria	M	Lipocalin-like domain	-	-	-	ko:K03098	-	-	-	-	ko00000,ko04147	-	-	-	Lipocalin_2
DYD3_k127_6895467_13	1123504.JQKD01000008_gene5358	2.016e-79	273.0	COG0024@1|root,COG0024@2|Bacteria,1MU99@1224|Proteobacteria,2VPUN@28216|Betaproteobacteria,4AD0X@80864|Comamonadaceae	28216|Betaproteobacteria	E	Metallopeptidase family M24	-	-	3.4.11.18	ko:K01265	-	-	-	-	ko00000,ko01000,ko01002	-	-	-	Peptidase_M24
DYD3_k127_6895467_20	1096930.L284_11385	3.262e-56	200.0	COG2128@1|root,COG2128@2|Bacteria,1RD1K@1224|Proteobacteria,2U6ZZ@28211|Alphaproteobacteria,2K4KY@204457|Sphingomonadales	204457|Sphingomonadales	O	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity	-	-	-	-	-	-	-	-	-	-	-	-	CMD
DYD3_k127_6895467_25	1185652.USDA257_c13640	1.883e-47	175.0	COG1959@1|root,COG1959@2|Bacteria,1RGHN@1224|Proteobacteria,2U85B@28211|Alphaproteobacteria,4BBDV@82115|Rhizobiaceae	28211|Alphaproteobacteria	K	transcriptional regulator	-	-	-	-	-	-	-	-	-	-	-	-	Rrf2
DYD3_k127_6895467_41	240016.ABIZ01000001_gene818	5.573e-29	119.0	COG2261@1|root,COG2261@2|Bacteria	2|Bacteria	S	Transglycosylase associated protein	MA20_40075	-	-	-	-	-	-	-	-	-	-	-	Transgly_assoc
DYD3_k127_6895467_15	1134474.O59_002570	3.306e-67	242.0	COG3525@1|root,COG3525@2|Bacteria,1QR2G@1224|Proteobacteria,1RZNM@1236|Gammaproteobacteria,1FFSX@10|Cellvibrio	1236|Gammaproteobacteria	G	beta-N-acetylglucosaminidase	-	-	3.2.1.35	ko:K01197	ko00531,ko01100,map00531,map01100	M00076,M00077	R07824,R07825,R10905	-	ko00000,ko00001,ko00002,ko00536,ko00537,ko01000,ko02042	-	-	-	Glyco_hydro_20b,NAGidase
DYD3_k127_6895467_53	1117315.AHCA01000022_gene1779	3.396e-13	74.0	2EID4@1|root,33C4H@2|Bacteria,1NINC@1224|Proteobacteria,1SGS1@1236|Gammaproteobacteria,2Q5AM@267888|Pseudoalteromonadaceae	1236|Gammaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_6895467_54	1201290.M902_0821	3.627e-11	73.0	2EBW1@1|root,335VE@2|Bacteria,1NPNE@1224|Proteobacteria,432H3@68525|delta/epsilon subdivisions,2WXS6@28221|Deltaproteobacteria	28221|Deltaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_6895467_23	1246995.AFR_33175	1.042e-50	188.0	COG0300@1|root,COG0300@2|Bacteria,2HU95@201174|Actinobacteria,4DCYB@85008|Micromonosporales	201174|Actinobacteria	S	Enoyl-(Acyl carrier protein) reductase	-	-	-	-	-	-	-	-	-	-	-	-	adh_short
DYD3_k127_6895467_38	1008457.BAEX01000044_gene2862	2.887e-34	138.0	COG3247@1|root,COG3247@2|Bacteria,4NQZ1@976|Bacteroidetes,1I33Q@117743|Flavobacteriia,47I8A@76831|Myroides	976|Bacteroidetes	S	Short repeat of unknown function (DUF308)	-	-	-	-	-	-	-	-	-	-	-	-	DUF308
DYD3_k127_6895467_1	264462.Bd1081	1.599e-197	633.0	COG0840@1|root,COG0840@2|Bacteria,1MU9B@1224|Proteobacteria,42MZX@68525|delta/epsilon subdivisions,2MTNJ@213481|Bdellovibrionales,2WMCT@28221|Deltaproteobacteria	213481|Bdellovibrionales	NT	chemotaxis protein	-	-	-	ko:K03406	ko02020,ko02030,map02020,map02030	-	-	-	ko00000,ko00001,ko02035	-	-	-	MCPsignal,dCache_1
DYD3_k127_6895467_55	1286106.MPL1_00697	4.207e-11	72.0	2DQY9@1|root,339CR@2|Bacteria,1NR8Y@1224|Proteobacteria	1224|Proteobacteria	S	PFAM conserved	-	-	-	-	-	-	-	-	-	-	-	-	Gcw_chp
DYD3_k127_6895467_32	1396418.BATQ01000106_gene5292	2.686e-40	153.0	COG1764@1|root,COG1764@2|Bacteria,46SZN@74201|Verrucomicrobia	74201|Verrucomicrobia	O	OsmC-like protein	-	-	-	ko:K04063	-	-	-	-	ko00000	-	-	-	OsmC
DYD3_k127_6895467_21	264462.Bd1365	5.321e-56	200.0	COG0229@1|root,COG0229@2|Bacteria,1R341@1224|Proteobacteria,43DIY@68525|delta/epsilon subdivisions	1224|Proteobacteria	C	SelR domain	-	-	1.8.4.12	ko:K07305	-	-	-	-	ko00000,ko01000	-	-	-	SelR
DYD3_k127_6895467_43	1047013.AQSP01000044_gene246	5.413e-27	119.0	COG3829@1|root,COG3920@1|root,COG3829@2|Bacteria,COG3920@2|Bacteria,2NPS5@2323|unclassified Bacteria	2|Bacteria	T	Histidine kinase	pdtaS	-	2.7.13.3,3.1.3.3	ko:K00936,ko:K07315	-	M00839	-	-	ko00000,ko00002,ko01000,ko01001,ko02022,ko03021	-	-	-	HATPase_c,HATPase_c_2,H_kinase_N,HisKA_2,PAS,PAS_9,SpoIIE
DYD3_k127_6899202_5	862908.BMS_2928	6.939e-121	391.0	COG1536@1|root,COG1536@2|Bacteria,1MV9X@1224|Proteobacteria,42MS3@68525|delta/epsilon subdivisions,2MSSF@213481|Bdellovibrionales,2WMCR@28221|Deltaproteobacteria	213481|Bdellovibrionales	N	flagellar motor switch protein FliG	fliG	-	-	ko:K02410	ko02030,ko02040,map02030,map02040	-	-	-	ko00000,ko00001,ko02035	-	-	-	FliG_C,FliG_M,FliG_N
DYD3_k127_6899202_0	1353529.M899_1278	7.989e-241	755.0	COG1766@1|root,COG1766@2|Bacteria,1MUQR@1224|Proteobacteria,42N04@68525|delta/epsilon subdivisions,2MSPC@213481|Bdellovibrionales,2WJS0@28221|Deltaproteobacteria	213481|Bdellovibrionales	N	The M ring may be actively involved in energy transduction	fliF	-	-	ko:K02409	ko02040,map02040	-	-	-	ko00000,ko00001,ko02035,ko02044	3.A.6.2,3.A.6.3	-	-	YscJ_FliF,YscJ_FliF_C
DYD3_k127_6899202_13	1353529.M899_1279	2.701e-27	114.0	COG1677@1|root,COG1677@2|Bacteria,1NIFD@1224|Proteobacteria,42V1E@68525|delta/epsilon subdivisions,2MTDW@213481|Bdellovibrionales,2WRIG@28221|Deltaproteobacteria	213481|Bdellovibrionales	N	Flagellar hook-basal body complex protein FliE	fliE	-	-	ko:K02408	ko02040,map02040	-	-	-	ko00000,ko00001,ko02035	-	-	-	FliE
DYD3_k127_6899202_11	862908.BMS_2931	1.011e-59	209.0	COG1558@1|root,COG1558@2|Bacteria,1RHI3@1224|Proteobacteria,42TPI@68525|delta/epsilon subdivisions,2MT0U@213481|Bdellovibrionales,2WP1C@28221|Deltaproteobacteria	213481|Bdellovibrionales	N	Belongs to the flagella basal body rod proteins family	flgC	-	-	ko:K02388	ko02040,map02040	-	-	-	ko00000,ko00001,ko02035	-	-	-	Flg_bb_rod,Flg_bbr_C
DYD3_k127_6899202_10	862908.BMS_2932	4.674e-61	213.0	COG1815@1|root,COG1815@2|Bacteria,1PSBA@1224|Proteobacteria,42VSQ@68525|delta/epsilon subdivisions,2MT3D@213481|Bdellovibrionales,2WRCG@28221|Deltaproteobacteria	213481|Bdellovibrionales	N	Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body	flgB	-	-	ko:K02387	ko02040,map02040	-	-	-	ko00000,ko00001,ko02035	-	-	-	Flg_bb_rod
DYD3_k127_6899202_6	1353529.M899_1282	1.971e-107	356.0	COG2204@1|root,COG2204@2|Bacteria,1MU0N@1224|Proteobacteria,42M03@68525|delta/epsilon subdivisions,2MUNY@213481|Bdellovibrionales,2WKG2@28221|Deltaproteobacteria	213481|Bdellovibrionales	T	PFAM sigma-54 factor interaction domain-containing protein	flbD	-	-	ko:K10943	ko02020,ko05111,map02020,map05111	M00515	-	-	ko00000,ko00001,ko00002,ko02022	-	-	-	HTH_8,Response_reg,Sigma54_activat
DYD3_k127_6899202_1	862908.BMS_2934	1.651e-199	653.0	COG1729@1|root,COG1729@2|Bacteria	2|Bacteria	S	protein trimerization	-	-	-	ko:K02453	ko03070,ko05111,map03070,map05111	M00331	-	-	ko00000,ko00001,ko00002,ko02044	3.A.15	-	-	Beta-lactamase,DUF3471,TPR_11,TPR_16,TPR_2,TPR_6,TPR_8
DYD3_k127_6899202_15	1144275.COCOR_07794	5.003e-07	58.0	2ENGZ@1|root,33G4G@2|Bacteria,1P6A6@1224|Proteobacteria,43288@68525|delta/epsilon subdivisions,2WXAP@28221|Deltaproteobacteria	28221|Deltaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_6899202_8	1201288.M900_0462	1.781e-90	304.0	COG0767@1|root,COG0767@2|Bacteria,1RHNJ@1224|Proteobacteria,42SNW@68525|delta/epsilon subdivisions,2MSYP@213481|Bdellovibrionales,2WPKT@28221|Deltaproteobacteria	213481|Bdellovibrionales	Q	ABC transporter, permease protein	-	-	-	ko:K02066	ko02010,map02010	M00210,M00669,M00670	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.27	-	-	MlaE
DYD3_k127_6899202_9	1201288.M900_0461	6.123e-82	279.0	COG1127@1|root,COG1127@2|Bacteria,1MUSD@1224|Proteobacteria,42NI4@68525|delta/epsilon subdivisions,2WKRT@28221|Deltaproteobacteria	28221|Deltaproteobacteria	Q	ABC transporter	-	-	-	ko:K02065	ko02010,map02010	M00210,M00669,M00670	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.27	-	-	ABC_tran
DYD3_k127_6899202_12	1201288.M900_0460	8.555e-52	194.0	COG1463@1|root,COG1463@2|Bacteria,1MY8D@1224|Proteobacteria,42TCA@68525|delta/epsilon subdivisions,2MT7F@213481|Bdellovibrionales,2WP6I@28221|Deltaproteobacteria	213481|Bdellovibrionales	Q	ABC-type transport system involved in resistance to organic solvents periplasmic component	-	-	-	ko:K02067	ko02010,map02010	M00210,M00669,M00670	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.27	-	-	MlaD
DYD3_k127_6899202_3	1353529.M899_1284	2.599e-183	586.0	COG2204@1|root,COG2204@2|Bacteria,1MU0N@1224|Proteobacteria,42M03@68525|delta/epsilon subdivisions,2MSND@213481|Bdellovibrionales,2WIT0@28221|Deltaproteobacteria	213481|Bdellovibrionales	T	two component, sigma54 specific, transcriptional regulator, Fis family	fgrM	-	-	-	-	-	-	-	-	-	-	-	HTH_8,Response_reg,Sigma54_activat
DYD3_k127_6899202_2	1353529.M899_1287	6.378e-195	614.0	COG0192@1|root,COG0192@2|Bacteria,1MUFQ@1224|Proteobacteria,42MFM@68525|delta/epsilon subdivisions,2MSNZ@213481|Bdellovibrionales,2WIQ3@28221|Deltaproteobacteria	213481|Bdellovibrionales	H	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme	metK	-	2.5.1.6	ko:K00789	ko00270,ko01100,ko01110,ko01230,map00270,map01100,map01110,map01230	M00034,M00035,M00368,M00609	R00177,R04771	RC00021,RC01211	ko00000,ko00001,ko00002,ko01000	-	-	-	S-AdoMet_synt_C,S-AdoMet_synt_M,S-AdoMet_synt_N
DYD3_k127_6899202_4	1353529.M899_1289	2.385e-162	524.0	COG0773@1|root,COG0773@2|Bacteria,1MUC5@1224|Proteobacteria,42NMY@68525|delta/epsilon subdivisions,2MSVI@213481|Bdellovibrionales,2WJ8S@28221|Deltaproteobacteria	213481|Bdellovibrionales	M	Mur ligase, middle domain	mpl	-	6.3.2.45	ko:K02558	-	-	-	-	ko00000,ko01000	-	-	-	Mur_ligase,Mur_ligase_C,Mur_ligase_M
DYD3_k127_6910488_1	1201290.M902_2965	1.303e-62	234.0	COG3863@1|root,COG3863@2|Bacteria,1R3R2@1224|Proteobacteria,42S8G@68525|delta/epsilon subdivisions,2MTRU@213481|Bdellovibrionales,2WNZG@28221|Deltaproteobacteria	213481|Bdellovibrionales	S	Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family	-	-	-	-	-	-	-	-	-	-	-	-	Peptidase_C92
DYD3_k127_6910488_2	392500.Swoo_2827	1.274e-57	209.0	2CAM1@1|root,301FE@2|Bacteria,1RJ36@1224|Proteobacteria,1S7TX@1236|Gammaproteobacteria	1236|Gammaproteobacteria	S	Ceramidase	-	-	-	-	-	-	-	-	-	-	-	-	Ceramidase
DYD3_k127_6910488_0	941449.dsx2_1645	2.104e-185	595.0	COG1387@1|root,COG1387@2|Bacteria,1MYXV@1224|Proteobacteria,42MQX@68525|delta/epsilon subdivisions,2WKUP@28221|Deltaproteobacteria,2MA0I@213115|Desulfovibrionales	28221|Deltaproteobacteria	E	pfam php	-	-	-	ko:K02347	-	-	-	-	ko00000,ko03400	-	-	-	DNA_pol_B_palm,DNA_pol_B_thumb,HHH_5,HHH_8,PHP
DYD3_k127_6910488_3	1274374.CBLK010000045_gene2606	1.37e-13	81.0	COG0583@1|root,COG0583@2|Bacteria,1TSDV@1239|Firmicutes,4HN0I@91061|Bacilli,274JD@186822|Paenibacillaceae	91061|Bacilli	K	Bacterial regulatory helix-turn-helix protein, lysR family	-	-	-	-	-	-	-	-	-	-	-	-	HTH_1,LysR_substrate
DYD3_k127_6928388_5	862908.BMS_0132	3.723e-11	72.0	COG0457@1|root,COG0457@2|Bacteria,1NEMW@1224|Proteobacteria,42WBX@68525|delta/epsilon subdivisions,2MTCS@213481|Bdellovibrionales,2WRAD@28221|Deltaproteobacteria	213481|Bdellovibrionales	NU	Tetratricopeptide repeat	-	-	-	-	-	-	-	-	-	-	-	-	TPR_14,TPR_16,TPR_19,TPR_8
DYD3_k127_6928388_2	862908.BMS_0133	4.512e-45	167.0	COG0757@1|root,COG0757@2|Bacteria,1RDDT@1224|Proteobacteria,42QU1@68525|delta/epsilon subdivisions,2WP6E@28221|Deltaproteobacteria	28221|Deltaproteobacteria	E	Catalyzes a trans-dehydration via an enolate intermediate	aroQ	-	4.2.1.10	ko:K03786	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	M00022	R03084	RC00848	ko00000,ko00001,ko00002,ko01000	-	-	-	DHquinase_II
DYD3_k127_6928388_1	1353529.M899_0141	1.752e-79	271.0	COG0231@1|root,COG0231@2|Bacteria,1MW2J@1224|Proteobacteria,42N6H@68525|delta/epsilon subdivisions,2MT0E@213481|Bdellovibrionales,2WNG7@28221|Deltaproteobacteria	213481|Bdellovibrionales	J	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase	efp	GO:0003674,GO:0003676,GO:0003723,GO:0003746,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006412,GO:0006414,GO:0006518,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576	-	ko:K02356	-	-	-	-	ko00000,ko03012	-	-	-	EFP,EFP_N,Elong-fact-P_C
DYD3_k127_6928388_3	1353529.M899_0142	5.347e-37	144.0	COG0511@1|root,COG0511@2|Bacteria,1RCXA@1224|Proteobacteria,42SQQ@68525|delta/epsilon subdivisions,2WPIW@28221|Deltaproteobacteria	28221|Deltaproteobacteria	I	first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA	accB	-	-	ko:K02160	ko00061,ko00620,ko00640,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00061,map00620,map00640,map00720,map01100,map01110,map01120,map01130,map01200,map01212	M00082,M00376	R00742	RC00040,RC00367	ko00000,ko00001,ko00002	-	-	-	Biotin_lipoyl
DYD3_k127_6928388_0	1353529.M899_0143	7.116e-204	642.0	COG0439@1|root,COG0439@2|Bacteria,1MU4H@1224|Proteobacteria,42M14@68525|delta/epsilon subdivisions,2MTQX@213481|Bdellovibrionales,2WIN7@28221|Deltaproteobacteria	213481|Bdellovibrionales	I	Biotin carboxylase	accC	-	6.3.4.14,6.4.1.1,6.4.1.2	ko:K01959,ko:K01961	ko00020,ko00061,ko00620,ko00640,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,ko01230,map00020,map00061,map00620,map00640,map00720,map01100,map01110,map01120,map01130,map01200,map01212,map01230	M00082,M00173,M00376,M00620	R00344,R00742,R04385	RC00040,RC00253,RC00367	ko00000,ko00001,ko00002,ko01000	-	-	-	Biotin_carb_C,Biotin_carb_N,CPSase_L_D2
DYD3_k127_6928388_4	862908.BMS_0139	3.901e-33	148.0	COG2911@1|root,COG2911@2|Bacteria,1PQTA@1224|Proteobacteria,42PYT@68525|delta/epsilon subdivisions,2MT6E@213481|Bdellovibrionales,2WIZ6@28221|Deltaproteobacteria	213481|Bdellovibrionales	M	TamB, inner membrane protein subunit of TAM complex	-	-	-	ko:K09800	-	-	-	-	ko00000,ko02000	-	-	-	TamB
DYD3_k127_692998_2	862908.BMS_3409	8.225e-69	248.0	28XQR@1|root,2ZJME@2|Bacteria,1P7K1@1224|Proteobacteria,4328C@68525|delta/epsilon subdivisions,2MT8S@213481|Bdellovibrionales,2WX7W@28221|Deltaproteobacteria	213481|Bdellovibrionales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_692998_1	1353529.M899_3480	9.779e-157	498.0	COG0462@1|root,COG0462@2|Bacteria,1MW21@1224|Proteobacteria,42MI2@68525|delta/epsilon subdivisions,2MSQS@213481|Bdellovibrionales,2WJ5W@28221|Deltaproteobacteria	213481|Bdellovibrionales	F	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)	prs	-	2.7.6.1	ko:K00948	ko00030,ko00230,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00230,map01100,map01110,map01120,map01130,map01200,map01230	M00005	R01049	RC00002,RC00078	ko00000,ko00001,ko00002,ko01000	-	-	iAF987.Gmet_2848	Pribosyl_synth,Pribosyltran_N
DYD3_k127_692998_3	1201288.M900_2792	2.515e-62	219.0	COG0193@1|root,COG0193@2|Bacteria,1MX1P@1224|Proteobacteria,42RGU@68525|delta/epsilon subdivisions,2MT3K@213481|Bdellovibrionales,2WPHH@28221|Deltaproteobacteria	213481|Bdellovibrionales	J	The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis	pth	GO:0003674,GO:0003824,GO:0004045,GO:0016787,GO:0016788,GO:0052689,GO:0140098,GO:0140101	3.1.1.29	ko:K01056	-	-	-	-	ko00000,ko01000,ko03012	-	-	-	Pept_tRNA_hydro
DYD3_k127_692998_0	1353529.M899_3477	2.813e-169	538.0	COG0012@1|root,COG0012@2|Bacteria,1MVM4@1224|Proteobacteria,42MNJ@68525|delta/epsilon subdivisions,2MSSE@213481|Bdellovibrionales,2WIZZ@28221|Deltaproteobacteria	213481|Bdellovibrionales	J	ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner	ychF	-	-	ko:K06942	-	-	-	-	ko00000,ko03009	-	-	-	MMR_HSR1,YchF-GTPase_C
DYD3_k127_6951484_2	862908.BMS_1119	6.496e-171	555.0	COG1858@1|root,COG1858@2|Bacteria,1Q1WW@1224|Proteobacteria,42VS7@68525|delta/epsilon subdivisions,2MTSK@213481|Bdellovibrionales,2WS3P@28221|Deltaproteobacteria	213481|Bdellovibrionales	C	cytochrome C peroxidase	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_6951484_21	471856.Jden_0175	8.451e-07	61.0	COG1716@1|root,COG1716@2|Bacteria,2GKA7@201174|Actinobacteria	201174|Actinobacteria	T	(FHA) domain	fhaB	GO:0005575,GO:0005576,GO:0005623,GO:0005886,GO:0006950,GO:0006979,GO:0008150,GO:0009987,GO:0016020,GO:0040007,GO:0044110,GO:0044116,GO:0044117,GO:0044119,GO:0044403,GO:0044419,GO:0044464,GO:0050896,GO:0051301,GO:0051704,GO:0071944	-	-	-	-	-	-	-	-	-	-	FHA,Yop-YscD_cpl
DYD3_k127_6951484_4	1131553.JIBI01000030_gene2441	1.133e-110	369.0	COG0454@1|root,COG0456@2|Bacteria,1MVZ2@1224|Proteobacteria	1224|Proteobacteria	K	COG0456 Acetyltransferases	-	-	-	-	-	-	-	-	-	-	-	-	Acetyltransf_1,Acetyltransf_10,DUF3335
DYD3_k127_6951484_1	287.DR97_5904	2.436e-183	586.0	COG0189@1|root,COG0189@2|Bacteria,1MX5X@1224|Proteobacteria,1RNXP@1236|Gammaproteobacteria,1YJAT@136841|Pseudomonas aeruginosa group	1236|Gammaproteobacteria	HJ	RimK-like ATP-grasp domain	-	-	-	-	-	-	-	-	-	-	-	-	Dala_Dala_lig_C,RLAN,RimK
DYD3_k127_6951484_11	489825.LYNGBM3L_49560	8.503e-50	187.0	COG3608@1|root,COG3608@2|Bacteria,1GQ51@1117|Cyanobacteria,1H92K@1150|Oscillatoriales	1117|Cyanobacteria	S	Succinylglutamate desuccinylase / Aspartoacylase family	-	-	3.5.1.15	ko:K01437	ko00250,ko00340,ko01100,map00250,map00340,map01100	-	R00488,R00526	RC00064,RC00165,RC00300,RC00323	ko00000,ko00001,ko01000	-	-	-	AstE_AspA
DYD3_k127_6951484_13	1297742.A176_07378	9.158e-46	177.0	COG2850@1|root,COG2850@2|Bacteria	2|Bacteria	P	peptidyl-arginine hydroxylation	-	-	-	-	-	-	-	-	-	-	-	-	Cupin_4
DYD3_k127_6951484_12	1353529.M899_0961	5.277e-48	181.0	COG1279@1|root,COG1279@2|Bacteria,1RD6B@1224|Proteobacteria,42SBK@68525|delta/epsilon subdivisions,2WQ42@28221|Deltaproteobacteria	28221|Deltaproteobacteria	S	LysE type translocator	-	-	-	ko:K06895	-	-	-	-	ko00000,ko02000	2.A.75.1	-	-	LysE
DYD3_k127_6951484_18	1122247.C731_4690	5.03e-10	66.0	COG2346@1|root,COG2346@2|Bacteria,2GQFN@201174|Actinobacteria,2397P@1762|Mycobacteriaceae	201174|Actinobacteria	C	Group 1 truncated hemoglobin	glbN	GO:0001505,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008941,GO:0009056,GO:0009605,GO:0009607,GO:0009636,GO:0009987,GO:0016491,GO:0016705,GO:0016708,GO:0017144,GO:0019825,GO:0020012,GO:0020037,GO:0030682,GO:0034641,GO:0036094,GO:0042133,GO:0042135,GO:0042221,GO:0042737,GO:0043207,GO:0044237,GO:0044248,GO:0044270,GO:0044403,GO:0044413,GO:0044415,GO:0044419,GO:0044424,GO:0044444,GO:0044464,GO:0046209,GO:0046210,GO:0046906,GO:0048037,GO:0050896,GO:0051213,GO:0051410,GO:0051701,GO:0051704,GO:0051707,GO:0051805,GO:0051807,GO:0051832,GO:0051834,GO:0052060,GO:0052173,GO:0052200,GO:0052376,GO:0052551,GO:0052564,GO:0052565,GO:0052572,GO:0055114,GO:0065007,GO:0065008,GO:0072593,GO:0075136,GO:0097159,GO:0098754,GO:1901363,GO:1901698,GO:2001057	-	ko:K06886	-	-	-	-	ko00000	-	-	-	Bac_globin
DYD3_k127_6951484_3	1120999.JONM01000011_gene1653	1.372e-152	505.0	COG1633@1|root,COG3369@1|root,COG3592@1|root,COG1633@2|Bacteria,COG3369@2|Bacteria,COG3592@2|Bacteria,1PMC0@1224|Proteobacteria,2W1FN@28216|Betaproteobacteria,2KTQS@206351|Neisseriales	206351|Neisseriales	S	Ferritin-like	-	-	-	ko:K20087	ko00404,ko01130,ko02024,map00404,map01130,map02024	M00808	R11131	RC03364	ko00000,ko00001,ko00002	-	-	-	Ferritin-like
DYD3_k127_6951484_7	1184267.A11Q_2435	2.948e-86	291.0	COG1135@1|root,COG1135@2|Bacteria,1R2TE@1224|Proteobacteria,43EJS@68525|delta/epsilon subdivisions,2X8NB@28221|Deltaproteobacteria	28221|Deltaproteobacteria	P	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system	-	-	-	ko:K02071	ko02010,map02010	M00238	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.24	-	-	ABC_tran
DYD3_k127_6951484_6	1184267.A11Q_2434	9.778e-92	306.0	COG2011@1|root,COG2011@2|Bacteria,1MW8E@1224|Proteobacteria,42PBM@68525|delta/epsilon subdivisions,2WR5Y@28221|Deltaproteobacteria	28221|Deltaproteobacteria	P	Binding-protein-dependent transport system inner membrane component	-	-	-	ko:K02072	ko02010,map02010	M00238	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.24	-	-	BPD_transp_1
DYD3_k127_6951484_5	748280.NH8B_3057	1.338e-94	316.0	COG1464@1|root,COG1464@2|Bacteria,1MUVY@1224|Proteobacteria,2VH5P@28216|Betaproteobacteria,2KQK5@206351|Neisseriales	206351|Neisseriales	M	NLPA lipoprotein	metQ	-	-	ko:K02073	ko02010,map02010	M00238	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.24	-	-	Lipoprotein_9
DYD3_k127_6951484_16	582515.KR51_00037310	2.916e-29	132.0	COG2373@1|root,COG2931@1|root,COG3209@1|root,COG2373@2|Bacteria,COG2931@2|Bacteria,COG3209@2|Bacteria,1G1JS@1117|Cyanobacteria	1117|Cyanobacteria	C	Animal haem peroxidase	-	-	1.11.1.7	ko:K19511	-	-	-	-	ko00000,ko01000	-	-	-	An_peroxidase,HemolysinCabind
DYD3_k127_6951484_17	1382315.JPOI01000001_gene15	2.242e-13	80.0	COG0583@1|root,COG0583@2|Bacteria,1TZ6U@1239|Firmicutes,4HB3Y@91061|Bacilli,1WEWD@129337|Geobacillus	91061|Bacilli	K	Bacterial regulatory helix-turn-helix protein, lysR family	ccpC	-	-	-	-	-	-	-	-	-	-	-	HTH_1,LysR_substrate
DYD3_k127_6951484_19	1353529.M899_0660	5.63e-09	60.0	COG2900@1|root,COG2900@2|Bacteria,1NGFM@1224|Proteobacteria	1224|Proteobacteria	S	Belongs to the SlyX family	slyX	-	-	ko:K03745	-	-	-	-	ko00000	-	-	-	SlyX
DYD3_k127_6951484_10	1317122.ATO12_03870	2.249e-50	205.0	COG3291@1|root,COG3291@2|Bacteria,4P2UU@976|Bacteroidetes,1HYAX@117743|Flavobacteriia,2YH5F@290174|Aquimarina	976|Bacteroidetes	Q	Mycoplasma protein of unknown function, DUF285	-	-	-	-	-	-	-	-	-	-	-	-	CHU_C,Cadherin,DUF285,TIG,TSP_3
DYD3_k127_6951484_15	392500.Swoo_2168	1.201e-30	124.0	COG1393@1|root,COG1393@2|Bacteria,1MZ4Z@1224|Proteobacteria,1S8XH@1236|Gammaproteobacteria,2QC99@267890|Shewanellaceae	1236|Gammaproteobacteria	C	PFAM arsenate reductase and related	arsC	-	1.20.4.1	ko:K00537	-	-	-	-	ko00000,ko01000	-	-	-	ArsC
DYD3_k127_6951484_14	264462.Bd2091	1.434e-42	161.0	2AINR@1|root,31957@2|Bacteria,1NZ0E@1224|Proteobacteria,430UB@68525|delta/epsilon subdivisions,2MT6P@213481|Bdellovibrionales,2WVME@28221|Deltaproteobacteria	213481|Bdellovibrionales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_6951484_8	1184267.A11Q_1722	2.05e-75	267.0	COG1253@1|root,COG1253@2|Bacteria,1MV3P@1224|Proteobacteria,42N97@68525|delta/epsilon subdivisions,2MTTG@213481|Bdellovibrionales,2WKVE@28221|Deltaproteobacteria	213481|Bdellovibrionales	S	CBS domain containing protein	-	-	-	ko:K03699	-	-	-	-	ko00000,ko02042	-	-	-	CBS,CorC_HlyC,DUF21
DYD3_k127_6951484_0	1353529.M899_1070	1.751e-193	611.0	COG2059@1|root,COG2059@2|Bacteria,1MUBW@1224|Proteobacteria,42P92@68525|delta/epsilon subdivisions,2WKXT@28221|Deltaproteobacteria	28221|Deltaproteobacteria	P	PFAM Chromate transporter	-	-	-	ko:K07240	-	-	-	-	ko00000,ko02000	2.A.51.1	-	-	Chromate_transp
DYD3_k127_6951484_9	391612.CY0110_13072	3.464e-57	205.0	COG1230@1|root,COG1230@2|Bacteria,1G4I5@1117|Cyanobacteria,3KJS2@43988|Cyanothece	1117|Cyanobacteria	P	Cation efflux protein	-	-	-	-	-	-	-	-	-	-	-	-	Cation_efflux
DYD3_k127_7005076_5	1353529.M899_2922	2.832e-109	359.0	COG0216@1|root,COG0216@2|Bacteria,1MV28@1224|Proteobacteria,42NA3@68525|delta/epsilon subdivisions,2MSSR@213481|Bdellovibrionales,2WIQU@28221|Deltaproteobacteria	213481|Bdellovibrionales	J	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA	prfA	-	-	ko:K02835	-	-	-	-	ko00000,ko03012	-	-	-	PCRF,RF-1
DYD3_k127_7005076_10	706587.Desti_4009	2.084e-77	272.0	COG3872@1|root,COG3872@2|Bacteria,1RCB0@1224|Proteobacteria,42R3I@68525|delta/epsilon subdivisions,2WMZR@28221|Deltaproteobacteria	28221|Deltaproteobacteria	S	Protein of unknown function (DUF1385)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1385
DYD3_k127_7005076_0	1353529.M899_2923	6.068e-219	691.0	COG1158@1|root,COG1158@2|Bacteria,1MUCF@1224|Proteobacteria,42M15@68525|delta/epsilon subdivisions,2MSUT@213481|Bdellovibrionales,2WIQN@28221|Deltaproteobacteria	213481|Bdellovibrionales	K	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template	rho	-	-	ko:K03628	ko03018,map03018	-	-	-	ko00000,ko00001,ko03019,ko03021	-	-	-	ATP-synt_ab,Rho_N,Rho_RNA_bind
DYD3_k127_7005076_9	1453496.AT03_17190	1.864e-101	341.0	COG0389@1|root,COG0389@2|Bacteria,1MUUH@1224|Proteobacteria,1RMFM@1236|Gammaproteobacteria	1236|Gammaproteobacteria	L	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII	dinB	GO:0000731,GO:0003674,GO:0003824,GO:0003887,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006259,GO:0006281,GO:0006301,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0007154,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009432,GO:0009605,GO:0009987,GO:0009991,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0019985,GO:0031668,GO:0033554,GO:0034061,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071496,GO:0071704,GO:0071897,GO:0090304,GO:0140097,GO:1901360,GO:1901362,GO:1901576	2.7.7.7	ko:K02346	-	-	-	-	ko00000,ko01000,ko03400	-	-	-	IMS,IMS_C,IMS_HHH
DYD3_k127_7005076_19	1201288.M900_0734	3.613e-36	142.0	COG0816@1|root,COG0816@2|Bacteria	2|Bacteria	L	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA	yqgF	GO:0000966,GO:0000967,GO:0003674,GO:0003824,GO:0004518,GO:0004527,GO:0004529,GO:0004536,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008296,GO:0008408,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016787,GO:0016788,GO:0016796,GO:0016895,GO:0022613,GO:0034470,GO:0034471,GO:0034641,GO:0034660,GO:0040007,GO:0042254,GO:0043170,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:0090305,GO:0140097,GO:1901360	-	ko:K07447	-	-	-	-	ko00000,ko01000	-	-	-	RuvX
DYD3_k127_7005076_3	862908.BMS_0624	3.75e-115	380.0	COG1559@1|root,COG1559@2|Bacteria,1MUQF@1224|Proteobacteria,42MPA@68525|delta/epsilon subdivisions,2MTGT@213481|Bdellovibrionales,2WJ0Q@28221|Deltaproteobacteria	213481|Bdellovibrionales	S	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation	mltG	-	-	ko:K07082	-	-	-	-	ko00000	-	-	-	YceG
DYD3_k127_7005076_15	1201288.M900_0730	9.236e-57	201.0	COG1853@1|root,COG1853@2|Bacteria,1QNV2@1224|Proteobacteria,42TD3@68525|delta/epsilon subdivisions,2WPRM@28221|Deltaproteobacteria	28221|Deltaproteobacteria	S	Flavin reductase like domain	-	-	-	-	-	-	-	-	-	-	-	-	Flavin_Reduct
DYD3_k127_7005076_18	1353529.M899_2929	3.552e-40	153.0	COG1734@1|root,COG1734@2|Bacteria,1N8RB@1224|Proteobacteria,42W5H@68525|delta/epsilon subdivisions,2MUSQ@213481|Bdellovibrionales,2WSAD@28221|Deltaproteobacteria	213481|Bdellovibrionales	T	RNA polymerase-binding protein DksA	dksA	-	-	ko:K06204	ko02026,map02026	-	-	-	ko00000,ko00001,ko03000,ko03009,ko03021	-	-	-	zf-dskA_traR
DYD3_k127_7005076_2	1353529.M899_2932	1.763e-115	381.0	COG1404@1|root,COG1404@2|Bacteria,1MU3S@1224|Proteobacteria,42SPI@68525|delta/epsilon subdivisions,2MTRP@213481|Bdellovibrionales,2X5HN@28221|Deltaproteobacteria	213481|Bdellovibrionales	O	Subtilase family	-	-	-	-	-	-	-	-	-	-	-	-	Peptidase_S8
DYD3_k127_7005076_6	862908.BMS_0617	5.164e-107	365.0	COG0815@1|root,COG0815@2|Bacteria,1MUBU@1224|Proteobacteria,42MPS@68525|delta/epsilon subdivisions,2MT58@213481|Bdellovibrionales,2WIUD@28221|Deltaproteobacteria	213481|Bdellovibrionales	M	Transfers the fatty acyl group on membrane lipoproteins	lnt	-	-	ko:K03820	-	-	-	-	ko00000,ko01000	-	GT2	-	CN_hydrolase
DYD3_k127_7005076_7	1353529.M899_2934	2.169e-105	353.0	COG0517@1|root,COG0794@1|root,COG0517@2|Bacteria,COG0794@2|Bacteria,1MUXD@1224|Proteobacteria,42M0M@68525|delta/epsilon subdivisions,2MSX0@213481|Bdellovibrionales,2WJ4Y@28221|Deltaproteobacteria	213481|Bdellovibrionales	M	Belongs to the SIS family. GutQ KpsF subfamily	-	-	5.3.1.13	ko:K06041	ko00540,ko01100,map00540,map01100	M00063	R01530	RC00541	ko00000,ko00001,ko00002,ko01000,ko01005	-	-	-	CBS,SIS
DYD3_k127_7005076_13	862908.BMS_0615	4.517e-68	235.0	28UNG@1|root,2ZGT0@2|Bacteria,1P5Q5@1224|Proteobacteria,432QC@68525|delta/epsilon subdivisions,2MT9I@213481|Bdellovibrionales,2WYH2@28221|Deltaproteobacteria	213481|Bdellovibrionales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_7005076_14	1201290.M902_0466	4.371e-63	226.0	COG1413@1|root,COG1413@2|Bacteria	2|Bacteria	C	deoxyhypusine monooxygenase activity	-	-	-	ko:K05386	ko00196,ko01100,map00196,map01100	-	-	-	ko00000,ko00001,ko00194	-	-	-	HEAT_2,zf-HC2
DYD3_k127_7005076_16	862908.BMS_0613	2.111e-52	199.0	291U0@1|root,2ZPDT@2|Bacteria,1PBDD@1224|Proteobacteria,433HV@68525|delta/epsilon subdivisions,2MUEQ@213481|Bdellovibrionales,2WXW5@28221|Deltaproteobacteria	213481|Bdellovibrionales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_7005076_17	862908.BMS_0612	5.271e-44	171.0	COG0483@1|root,COG0483@2|Bacteria,1MUQT@1224|Proteobacteria,42R1W@68525|delta/epsilon subdivisions,2MT4Z@213481|Bdellovibrionales,2WMQ4@28221|Deltaproteobacteria	213481|Bdellovibrionales	G	Inositol monophosphatase	suhB	-	3.1.3.25	ko:K01092	ko00521,ko00562,ko01100,ko04070,map00521,map00562,map01100,map04070	M00131	R01185,R01186,R01187	RC00078	ko00000,ko00001,ko00002,ko01000	-	-	-	Inositol_P
DYD3_k127_7005076_22	862908.BMS_0611	1.238e-17	84.0	COG3024@1|root,COG3024@2|Bacteria,1NGJ8@1224|Proteobacteria,42XRW@68525|delta/epsilon subdivisions,2MTFH@213481|Bdellovibrionales,2WT0E@28221|Deltaproteobacteria	213481|Bdellovibrionales	S	Inhibits all the catalytic activities of DNA gyrase by preventing its interaction with DNA. Acts by binding directly to the C-terminal domain of GyrB, which probably disrupts DNA binding by the gyrase	yacG	-	-	ko:K09862	-	-	-	-	ko00000	-	-	-	YacG
DYD3_k127_7005076_21	1122236.KB905141_gene746	7.292e-21	102.0	COG0115@1|root,COG0115@2|Bacteria,1MZAK@1224|Proteobacteria,2VRAS@28216|Betaproteobacteria,2KMJW@206350|Nitrosomonadales	206350|Nitrosomonadales	EH	PFAM Aminotransferase class IV	-	-	4.1.3.38	ko:K02619	ko00790,map00790	-	R05553	RC01843,RC02148	ko00000,ko00001,ko01000	-	-	-	Aminotran_4
DYD3_k127_7005076_12	862908.BMS_0609	6.613e-75	263.0	COG0059@1|root,COG0059@2|Bacteria,1MV7M@1224|Proteobacteria,42MRS@68525|delta/epsilon subdivisions,2WJW8@28221|Deltaproteobacteria	28221|Deltaproteobacteria	EH	Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate	ilvC	-	1.1.1.86	ko:K00053	ko00290,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00290,map00770,map01100,map01110,map01130,map01210,map01230	M00019,M00570	R03051,R04439,R04440,R05068,R05069,R05071	RC00726,RC00836,RC00837,RC01726	ko00000,ko00001,ko00002,ko01000	-	-	-	IlvC,IlvN
DYD3_k127_7005076_4	1201288.M900_0716	1.859e-112	367.0	COG0413@1|root,COG0413@2|Bacteria,1MU3B@1224|Proteobacteria,42MES@68525|delta/epsilon subdivisions,2MSX4@213481|Bdellovibrionales,2WIQK@28221|Deltaproteobacteria	213481|Bdellovibrionales	H	Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha-ketoisovalerate to form ketopantoate	panB	-	2.1.2.11	ko:K00606	ko00770,ko01100,ko01110,map00770,map01100,map01110	M00119	R01226	RC00022,RC00200	ko00000,ko00001,ko00002,ko01000	-	-	-	Pantoate_transf
DYD3_k127_7005076_20	862908.BMS_0607	1.103e-26	120.0	COG1521@1|root,COG1521@2|Bacteria	2|Bacteria	F	Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis	coaX	-	2.7.1.33,6.3.4.15	ko:K01947,ko:K03525	ko00770,ko00780,ko01100,map00770,map00780,map01100	M00120	R01074,R02971,R03018,R04391,R05145	RC00002,RC00017,RC00043,RC00070,RC00096,RC02896	ko00000,ko00001,ko00002,ko01000	-	-	-	Pan_kinase
DYD3_k127_7005076_8	1353529.M899_2948	1.509e-101	346.0	COG0452@1|root,COG0452@2|Bacteria,1MVQP@1224|Proteobacteria,42NIG@68525|delta/epsilon subdivisions,2MT56@213481|Bdellovibrionales,2WIR1@28221|Deltaproteobacteria	213481|Bdellovibrionales	H	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine	coaBC	-	4.1.1.36,6.3.2.5	ko:K13038	ko00770,ko01100,map00770,map01100	M00120	R03269,R04231	RC00064,RC00090,RC00822	ko00000,ko00001,ko00002,ko01000	-	-	-	DFP,Flavoprotein
DYD3_k127_7005076_11	1201288.M900_0711	3.748e-77	267.0	COG0414@1|root,COG0414@2|Bacteria,1MV1S@1224|Proteobacteria,42N3J@68525|delta/epsilon subdivisions,2MT29@213481|Bdellovibrionales,2WJ19@28221|Deltaproteobacteria	213481|Bdellovibrionales	H	Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate	panC	GO:0003674,GO:0003824,GO:0004592,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006573,GO:0006575,GO:0006732,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009081,GO:0009108,GO:0009110,GO:0009987,GO:0015939,GO:0015940,GO:0016053,GO:0016874,GO:0016879,GO:0016881,GO:0019752,GO:0032787,GO:0033317,GO:0034641,GO:0042364,GO:0042398,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0051186,GO:0051188,GO:0071704,GO:0072330,GO:1901564,GO:1901566,GO:1901576,GO:1901605	6.3.2.1	ko:K01918	ko00410,ko00770,ko01100,ko01110,map00410,map00770,map01100,map01110	M00119	R02473	RC00096,RC00141	ko00000,ko00001,ko00002,ko01000	-	-	-	Pantoate_ligase
DYD3_k127_7005076_1	1353529.M899_2950	7.079e-194	613.0	COG2262@1|root,COG2262@2|Bacteria,1MUA0@1224|Proteobacteria,42NA6@68525|delta/epsilon subdivisions,2MSVF@213481|Bdellovibrionales,2WIMU@28221|Deltaproteobacteria	213481|Bdellovibrionales	S	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis	hflX	-	-	ko:K03665	-	-	-	-	ko00000,ko03009	-	-	-	GTP-bdg_M,GTP-bdg_N,MMR_HSR1
DYD3_k127_7023078_0	756067.MicvaDRAFT_4820	1.789e-82	287.0	COG0642@1|root,COG2205@2|Bacteria	756067.MicvaDRAFT_4820|-	T	PhoQ Sensor	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_7023078_2	1444309.JAQG01000181_gene3476	1.38e-27	115.0	COG2329@1|root,COG2329@2|Bacteria,1VAM1@1239|Firmicutes,4HJD7@91061|Bacilli,26YVP@186822|Paenibacillaceae	91061|Bacilli	S	Antibiotic biosynthesis monooxygenase	yqjZ	-	-	-	-	-	-	-	-	-	-	-	ABM
DYD3_k127_7023078_1	262543.Exig_1005	3.649e-73	258.0	COG1619@1|root,COG1619@2|Bacteria,1TRBB@1239|Firmicutes,4HB1P@91061|Bacilli,3WG1Z@539002|Bacillales incertae sedis	91061|Bacilli	V	LD-carboxypeptidase	-	-	3.4.17.13	ko:K01297	-	-	-	-	ko00000,ko01000,ko01002,ko01011	-	-	-	Peptidase_S66
DYD3_k127_7045056_19	697282.Mettu_4037	1.603e-19	88.0	COG0499@1|root,COG0499@2|Bacteria,1MUQ2@1224|Proteobacteria,1RMW8@1236|Gammaproteobacteria,1XDX9@135618|Methylococcales	1236|Gammaproteobacteria	H	May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine	-	-	3.3.1.1	ko:K01251	ko00270,ko01100,map00270,map01100	M00035	R00192,R04936	RC00056,RC00069,RC01161,RC01243	ko00000,ko00001,ko00002,ko01000,ko01009,ko04147	-	-	iYL1228.KPN_02462	AdoHcyase,AdoHcyase_NAD
DYD3_k127_7045056_12	264462.Bd2525	1.512e-69	250.0	2FDIF@1|root,345JW@2|Bacteria,1P380@1224|Proteobacteria,431X9@68525|delta/epsilon subdivisions,2WX5Q@28221|Deltaproteobacteria	28221|Deltaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_7045056_25	314230.DSM3645_09042	8.307e-07	55.0	COG2010@1|root,COG2010@2|Bacteria,2IYIY@203682|Planctomycetes	203682|Planctomycetes	C	Planctomycete cytochrome C	-	-	-	-	-	-	-	-	-	-	-	-	F5_F8_type_C,PSCyt1,PSCyt2,PSD1
DYD3_k127_7045056_26	1123277.KB893181_gene2245	2.246e-05	53.0	COG2353@1|root,COG2353@2|Bacteria,4NP3F@976|Bacteroidetes,47PWB@768503|Cytophagia	976|Bacteroidetes	S	YceI-like domain	-	-	-	-	-	-	-	-	-	-	-	-	YceI
DYD3_k127_7045056_0	862908.BMS_2794	2.571e-169	541.0	COG0304@1|root,COG0304@2|Bacteria,1MU1X@1224|Proteobacteria,42MUZ@68525|delta/epsilon subdivisions,2MSU8@213481|Bdellovibrionales,2WJT6@28221|Deltaproteobacteria	213481|Bdellovibrionales	I	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP	fabF	-	2.3.1.179	ko:K09458	ko00061,ko00780,ko01100,ko01212,map00061,map00780,map01100,map01212	M00083,M00572	R04355,R04726,R04952,R04957,R04960,R04963,R04968,R07762,R10115,R10119	RC00039,RC02728,RC02729,RC02888	ko00000,ko00001,ko00002,ko01000,ko01004	-	-	-	Ketoacyl-synt_C,ketoacyl-synt
DYD3_k127_7045056_15	1201288.M900_2181	2.894e-27	112.0	COG0236@1|root,COG0236@2|Bacteria,1MZ4P@1224|Proteobacteria,42V9M@68525|delta/epsilon subdivisions,2MTFM@213481|Bdellovibrionales,2WRDW@28221|Deltaproteobacteria	213481|Bdellovibrionales	IQ	Carrier of the growing fatty acid chain in fatty acid biosynthesis	acpP	GO:0000035,GO:0000036,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0016053,GO:0019637,GO:0019752,GO:0019842,GO:0031177,GO:0032787,GO:0033218,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0044620,GO:0046394,GO:0046467,GO:0046493,GO:0048037,GO:0051192,GO:0071704,GO:0072330,GO:0072341,GO:0090407,GO:0140104,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509	-	ko:K02078	-	-	-	-	ko00000,ko00001	-	-	-	PP-binding
DYD3_k127_7045056_4	1353529.M899_2828	2.416e-105	347.0	COG1028@1|root,COG1028@2|Bacteria,1MU6X@1224|Proteobacteria,42MB9@68525|delta/epsilon subdivisions,2MSYR@213481|Bdellovibrionales,2WJ64@28221|Deltaproteobacteria	213481|Bdellovibrionales	IQ	Short-chain dehydrogenase reductase SDR	fabG	-	1.1.1.100	ko:K00059	ko00061,ko00333,ko00780,ko01040,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01040,map01100,map01130,map01212	M00083,M00572	R04533,R04534,R04536,R04543,R04566,R04953,R04964,R07759,R07763,R10116,R10120,R11671	RC00029,RC00117	ko00000,ko00001,ko00002,ko01000,ko01004	-	-	-	adh_short_C2
DYD3_k127_7045056_3	1353529.M899_2827	1.137e-113	374.0	COG0331@1|root,COG0331@2|Bacteria,1MV6N@1224|Proteobacteria,42MKH@68525|delta/epsilon subdivisions,2MT2G@213481|Bdellovibrionales,2WIWQ@28221|Deltaproteobacteria	213481|Bdellovibrionales	I	malonyl CoA-acyl carrier protein transacylase	fabD	-	2.3.1.39	ko:K00645	ko00061,ko00333,ko01100,ko01130,ko01212,map00061,map00333,map01100,map01130,map01212	M00082	R01626,R11671	RC00004,RC00039,RC02727	ko00000,ko00001,ko00002,ko01000,ko01004	-	-	-	Acyl_transf_1
DYD3_k127_7045056_2	862908.BMS_2790	9.246e-119	390.0	COG0332@1|root,COG0332@2|Bacteria,1MU9N@1224|Proteobacteria,42MU6@68525|delta/epsilon subdivisions,2MSQV@213481|Bdellovibrionales,2WIJN@28221|Deltaproteobacteria	213481|Bdellovibrionales	I	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids	fabH	-	2.3.1.180	ko:K00648	ko00061,ko01100,ko01212,map00061,map01100,map01212	M00082,M00083	R10707	RC00004,RC02729,RC02888	ko00000,ko00001,ko00002,ko01000,ko01004	-	-	-	ACP_syn_III,ACP_syn_III_C
DYD3_k127_7045056_21	579138.Zymop_1221	1.215e-14	76.0	COG0333@1|root,COG0333@2|Bacteria,1PU3Y@1224|Proteobacteria,2UF54@28211|Alphaproteobacteria,2K6RY@204457|Sphingomonadales	204457|Sphingomonadales	J	Belongs to the bacterial ribosomal protein bL32 family	rpmF	-	-	ko:K02911	ko03010,map03010	M00178	-	-	br01610,ko00000,ko00001,ko00002,ko03011,ko03029	-	-	-	Ribosomal_L32p
DYD3_k127_7045056_22	862908.BMS_2788	8.177e-13	78.0	COG1399@1|root,COG1399@2|Bacteria	2|Bacteria	K	metal-binding, possibly nucleic acid-binding protein	yceD	GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0040007,GO:0044424,GO:0044444,GO:0044464	-	ko:K07040	-	-	-	-	ko00000	-	-	-	DUF177
DYD3_k127_7045056_23	1201290.M902_0481	2.875e-11	71.0	COG0703@1|root,COG0703@2|Bacteria,1QA4J@1224|Proteobacteria,42XE0@68525|delta/epsilon subdivisions	1224|Proteobacteria	F	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate	aroK	-	2.7.1.71	ko:K00891,ko:K15546	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	M00022	R02412	RC00002,RC00078	ko00000,ko00001,ko00002,ko01000,ko03000	-	-	-	SKI
DYD3_k127_7045056_6	1353529.M899_2821	5.605e-91	312.0	COG0787@1|root,COG0787@2|Bacteria,1MV0Q@1224|Proteobacteria,42MGU@68525|delta/epsilon subdivisions,2MTA9@213481|Bdellovibrionales,2WIVG@28221|Deltaproteobacteria	213481|Bdellovibrionales	M	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids	alr	-	5.1.1.1	ko:K01775	ko00473,ko01100,ko01502,map00473,map01100,map01502	-	R00401	RC00285	ko00000,ko00001,ko01000,ko01011	-	-	-	Ala_racemase_C,Ala_racemase_N
DYD3_k127_7045056_5	862908.BMS_2783	2.093e-95	319.0	COG0767@1|root,COG0767@2|Bacteria,1MVPN@1224|Proteobacteria,42MR1@68525|delta/epsilon subdivisions,2MSZ1@213481|Bdellovibrionales,2WKC9@28221|Deltaproteobacteria	213481|Bdellovibrionales	Q	COG0767 ABC-type transport system involved in resistance to organic solvents, permease component	-	-	-	ko:K02066	ko02010,map02010	M00210,M00669,M00670	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.27	-	-	MlaE
DYD3_k127_7045056_7	1201290.M902_0485	2.781e-90	303.0	COG1127@1|root,COG1127@2|Bacteria,1MUSD@1224|Proteobacteria,42NI4@68525|delta/epsilon subdivisions,2MSZ5@213481|Bdellovibrionales,2WKRT@28221|Deltaproteobacteria	213481|Bdellovibrionales	Q	ABC transporter	-	-	-	ko:K02065	ko02010,map02010	M00210,M00669,M00670	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.27	-	-	ABC_tran
DYD3_k127_7045056_1	1201288.M900_2159	4.996e-125	415.0	COG1463@1|root,COG1463@2|Bacteria,1RFFS@1224|Proteobacteria,42P4P@68525|delta/epsilon subdivisions,2MT0H@213481|Bdellovibrionales,2WKQH@28221|Deltaproteobacteria	213481|Bdellovibrionales	Q	ABC-type transport system involved in resistance to organic solvents periplasmic component	-	-	-	ko:K02067	ko02010,map02010	M00210,M00669,M00670	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.27	-	-	MlaD
DYD3_k127_7045056_20	297246.lpp1571	2.051e-18	92.0	COG4123@1|root,COG4123@2|Bacteria,1RKDM@1224|Proteobacteria,1T6KZ@1236|Gammaproteobacteria,1JDUP@118969|Legionellales	118969|Legionellales	S	Conserved hypothetical protein 95	yfiC	-	-	-	-	-	-	-	-	-	-	-	MTS
DYD3_k127_7045056_17	1201288.M900_2155	6.691e-25	110.0	COG5512@1|root,COG5512@2|Bacteria	2|Bacteria	L	Zn-ribbon-containing possibly RNA-binding protein and truncated derivatives	-	-	-	-	-	-	-	-	-	-	-	-	DUF721
DYD3_k127_7045056_14	1353529.M899_2810	9.301e-50	189.0	COG1466@1|root,COG1466@2|Bacteria	2|Bacteria	L	DNA-directed DNA polymerase activity	holA	-	2.7.7.7	ko:K02340	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	M00260	R00375,R00376,R00377,R00378	RC02795	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	-	-	-	DNA_pol3_delta
DYD3_k127_7045056_8	862908.BMS_1925	1.931e-88	302.0	COG0657@1|root,COG0657@2|Bacteria,1MVRE@1224|Proteobacteria,42XSE@68525|delta/epsilon subdivisions,2MTJ5@213481|Bdellovibrionales,2WTGG@28221|Deltaproteobacteria	213481|Bdellovibrionales	I	Pectinacetylesterase	-	-	-	-	-	-	-	-	-	-	-	-	PAE
DYD3_k127_7045056_9	1353529.M899_2309	9.991e-84	317.0	COG2911@1|root,COG3209@1|root,COG2911@2|Bacteria,COG3209@2|Bacteria,1QY1R@1224|Proteobacteria,43C93@68525|delta/epsilon subdivisions,2MUT2@213481|Bdellovibrionales,2X7JI@28221|Deltaproteobacteria	213481|Bdellovibrionales	M	cell wall surface anchor family protein	-	-	-	-	-	-	-	-	-	-	-	-	Peptidase_S74
DYD3_k127_7045056_24	710685.MycrhN_2540	3.898e-08	68.0	COG3210@1|root,COG3210@2|Bacteria	2|Bacteria	U	domain, Protein	-	-	-	ko:K07483	-	-	-	-	ko00000	-	-	-	Big_2,LRR_5,PT-VENN,Peptidase_S74,SLH,VWA
DYD3_k127_7045056_11	1201288.M900_2187	9.849e-72	277.0	COG3210@1|root,COG5295@1|root,COG3210@2|Bacteria,COG5295@2|Bacteria,1N0C9@1224|Proteobacteria	1224|Proteobacteria	UW	YadA-like membrane anchor domain	-	-	-	ko:K12342	ko03070,map03070	-	-	-	ko00000,ko00001,ko02044	1.B.40.1.3,1.B.40.1.4	-	-	YadA_anchor,YadA_stalk
DYD3_k127_7045056_10	237368.SCABRO_02114	1.865e-82	284.0	COG3677@1|root,COG3677@2|Bacteria	2|Bacteria	L	transposition, DNA-mediated	tnp3503b	-	2.7.7.7	ko:K02342	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	M00260	R00375,R00376,R00377,R00378	RC02795	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	-	-	-	Transposase_mut
DYD3_k127_7045056_16	1201288.M900_A0231	2.072e-25	106.0	COG0500@1|root,COG2226@2|Bacteria,1R9JW@1224|Proteobacteria,42M76@68525|delta/epsilon subdivisions,2WK4P@28221|Deltaproteobacteria	28221|Deltaproteobacteria	Q	Methyltransferase	-	-	-	-	-	-	-	-	-	-	-	-	Methyltransf_11,Methyltransf_31
DYD3_k127_7049594_1	765869.BDW_04005	1.505e-84	297.0	COG0840@1|root,COG0840@2|Bacteria,1MU9B@1224|Proteobacteria,42M22@68525|delta/epsilon subdivisions,2WM8F@28221|Deltaproteobacteria	28221|Deltaproteobacteria	NT	Chemotaxis sensory transducer	mcp64H-1	-	-	ko:K03406	ko02020,ko02030,map02020,map02030	-	-	-	ko00000,ko00001,ko02035	-	-	-	4HB_MCP_1,HAMP,MCPsignal,PAS_4,dCache_1
DYD3_k127_7049594_3	264462.Bd1859	1.226e-05	57.0	2C5WA@1|root,2ZEZF@2|Bacteria,1P9T6@1224|Proteobacteria,433P4@68525|delta/epsilon subdivisions,2MUKM@213481|Bdellovibrionales,2WXC5@28221|Deltaproteobacteria	213481|Bdellovibrionales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_7049594_0	879212.DespoDRAFT_02522	9.519e-116	398.0	COG3291@1|root,COG4870@1|root,COG3291@2|Bacteria,COG4870@2|Bacteria,1N8Z7@1224|Proteobacteria,43AX0@68525|delta/epsilon subdivisions,2X6B7@28221|Deltaproteobacteria,2MPH8@213118|Desulfobacterales	28221|Deltaproteobacteria	O	Papain family cysteine protease	-	-	-	-	-	-	-	-	-	-	-	-	PKD,Peptidase_C1
DYD3_k127_7049594_2	1353529.M899_2142	2.506e-10	64.0	COG3091@1|root,COG3091@2|Bacteria,1R1VA@1224|Proteobacteria,43DBF@68525|delta/epsilon subdivisions,2X8HF@28221|Deltaproteobacteria	28221|Deltaproteobacteria	S	SprT-like family	-	-	-	-	-	-	-	-	-	-	-	-	DUF2786,SprT-like
DYD3_k127_707189_3	1286093.C266_24935	5.12e-11	65.0	COG0835@1|root,COG0835@2|Bacteria,1RAH1@1224|Proteobacteria,2VJAG@28216|Betaproteobacteria,1K6BZ@119060|Burkholderiaceae	28216|Betaproteobacteria	NT	Two component signalling adaptor domain	-	-	-	ko:K03408	ko02020,ko02030,map02020,map02030	-	-	-	ko00000,ko00001,ko02035	-	-	-	CheW
DYD3_k127_707189_2	1500893.JQNB01000001_gene2523	2.708e-28	119.0	COG1871@1|root,COG1871@2|Bacteria,1NCKP@1224|Proteobacteria,1T8E9@1236|Gammaproteobacteria,1XAID@135614|Xanthomonadales	135614|Xanthomonadales	NT	CheD chemotactic sensory transduction	-	-	-	-	-	-	-	-	-	-	-	-	CheD
DYD3_k127_707189_1	264462.Bd2830	7.891e-73	254.0	COG1352@1|root,COG1352@2|Bacteria,1MU6W@1224|Proteobacteria,42MR2@68525|delta/epsilon subdivisions,2MTW8@213481|Bdellovibrionales,2WKKH@28221|Deltaproteobacteria	213481|Bdellovibrionales	H	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP	cheR34H	-	2.1.1.80	ko:K00575	ko02020,ko02030,map02020,map02030	-	-	-	ko00000,ko00001,ko01000,ko02035	-	-	-	CheR,CheR_N
DYD3_k127_707189_0	796620.VIBC2010_10572	2.669e-284	895.0	COG0840@1|root,COG2202@1|root,COG0840@2|Bacteria,COG2202@2|Bacteria,1MU9B@1224|Proteobacteria,1RMH0@1236|Gammaproteobacteria,1XWMA@135623|Vibrionales	135623|Vibrionales	T	PAS fold	-	-	-	ko:K03406	ko02020,ko02030,map02020,map02030	-	-	-	ko00000,ko00001,ko02035	-	-	-	MCPsignal,PAS_3,PAS_4
DYD3_k127_707189_4	5217.XP_007004459.1	2.606e-05	52.0	COG0294@1|root,KOG2544@2759|Eukaryota,38FVT@33154|Opisthokonta,3NUR7@4751|Fungi,3UY0X@5204|Basidiomycota,3VEE8@5234|Tremellales	4751|Fungi	H	Folic acid and derivative biosynthesis-related protein	FOL1	GO:0003674,GO:0003824,GO:0003848,GO:0004150,GO:0004156,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005740,GO:0006082,GO:0006575,GO:0006725,GO:0006732,GO:0006760,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009396,GO:0009987,GO:0016053,GO:0016740,GO:0016765,GO:0016772,GO:0016778,GO:0016829,GO:0016830,GO:0016832,GO:0018130,GO:0019438,GO:0019752,GO:0031967,GO:0031975,GO:0034641,GO:0042398,GO:0042558,GO:0042559,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0046394,GO:0046483,GO:0046653,GO:0046654,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576	2.5.1.15,2.7.6.3,4.1.2.25	ko:K13939,ko:K13941	ko00790,ko01100,map00790,map01100	M00126,M00840	R03066,R03067,R03503,R03504	RC00002,RC00017,RC00121,RC00721,RC00842,RC00943	ko00000,ko00001,ko00002,ko01000	-	-	-	FolB,HPPK,Pterin_bind
DYD3_k127_7139487_2	1201288.M900_A0135	8.235e-05	46.0	COG0564@1|root,COG0564@2|Bacteria,1MVJ5@1224|Proteobacteria,42MDF@68525|delta/epsilon subdivisions,2X6EH@28221|Deltaproteobacteria	28221|Deltaproteobacteria	J	Responsible for synthesis of pseudouridine from uracil	-	-	5.4.99.23	ko:K06180	-	-	-	-	ko00000,ko01000,ko03009	-	-	-	PseudoU_synth_2
DYD3_k127_7139487_0	1353529.M899_3183	8.633e-291	912.0	COG2766@1|root,COG2766@2|Bacteria,1NG7R@1224|Proteobacteria,42P8B@68525|delta/epsilon subdivisions,2MUP8@213481|Bdellovibrionales,2WJIU@28221|Deltaproteobacteria	213481|Bdellovibrionales	T	PrkA AAA domain protein	-	-	-	-	-	-	-	-	-	-	-	-	AAA_PrkA,PrkA
DYD3_k127_7157881_1	2340.JV46_20220	2.068e-25	115.0	COG5001@1|root,COG5001@2|Bacteria,1MU2C@1224|Proteobacteria,1RM8A@1236|Gammaproteobacteria,1J80W@118884|unclassified Gammaproteobacteria	1236|Gammaproteobacteria	T	PAS S-box diguanylate cyclase domain-containing protein	-	-	-	-	-	-	-	-	-	-	-	-	5TM-5TMR_LYT,EAL,GGDEF,PAS,PAS_4,PAS_9,dCache_1
DYD3_k127_7157881_0	1538644.KO02_08145	4.634e-88	304.0	COG3746@1|root,COG3746@2|Bacteria,4NH24@976|Bacteroidetes,1IQ21@117747|Sphingobacteriia	976|Bacteroidetes	P	Phosphate-selective porin O and P	-	-	-	-	-	-	-	-	-	-	-	-	Porin_O_P
DYD3_k127_7171078_0	215803.DB30_3399	1.535e-48	176.0	COG0863@1|root,COG0863@2|Bacteria,1Q2ZE@1224|Proteobacteria,438NY@68525|delta/epsilon subdivisions,2X29R@28221|Deltaproteobacteria,2YXDD@29|Myxococcales	28221|Deltaproteobacteria	L	DNA methylase	-	-	-	-	-	-	-	-	-	-	-	-	N6_N4_Mtase
DYD3_k127_7171078_3	264462.Bd2426	6.319e-37	150.0	COG0705@1|root,COG0705@2|Bacteria,1Q8N7@1224|Proteobacteria,431UY@68525|delta/epsilon subdivisions,2MT6D@213481|Bdellovibrionales,2WX57@28221|Deltaproteobacteria	213481|Bdellovibrionales	S	Rhomboid family	-	-	-	-	-	-	-	-	-	-	-	-	Rhomboid
DYD3_k127_7171078_5	1036674.A28LD_0391	3.931e-26	124.0	COG0784@1|root,COG2202@1|root,COG4191@1|root,COG0784@2|Bacteria,COG2202@2|Bacteria,COG4191@2|Bacteria,1RCM9@1224|Proteobacteria,1RP53@1236|Gammaproteobacteria	1236|Gammaproteobacteria	T	Histidine kinase	-	-	-	-	-	-	-	-	-	-	-	-	HAMP,HATPase_c,HisKA,PAS,PAS_3,PAS_4,PAS_9,Response_reg
DYD3_k127_7171078_1	1242864.D187_003015	1.473e-47	190.0	COG0642@1|root,COG2203@1|root,COG3829@1|root,COG2203@2|Bacteria,COG2205@2|Bacteria,COG3829@2|Bacteria,1NRP8@1224|Proteobacteria,42Z45@68525|delta/epsilon subdivisions,2WTWB@28221|Deltaproteobacteria	28221|Deltaproteobacteria	T	Histidine kinase	-	-	-	-	-	-	-	-	-	-	-	-	GAF_2,HAMP,HATPase_c,HisKA,PAS_4
DYD3_k127_7171078_4	862908.BMS_1027	4.696e-28	117.0	COG0848@1|root,COG0848@2|Bacteria,1NE2Q@1224|Proteobacteria,42VAE@68525|delta/epsilon subdivisions,2MTD6@213481|Bdellovibrionales,2WRCE@28221|Deltaproteobacteria	213481|Bdellovibrionales	U	Biopolymer transport protein ExbD TolR	-	-	-	ko:K03559	-	-	-	-	ko00000,ko02000	1.A.30.2.1	-	-	ExbD
DYD3_k127_7171078_2	862908.BMS_1026	1.301e-44	169.0	COG0811@1|root,COG0811@2|Bacteria,1NBED@1224|Proteobacteria,42TPM@68525|delta/epsilon subdivisions,2WW8Z@28221|Deltaproteobacteria	28221|Deltaproteobacteria	U	MotA/TolQ/ExbB proton channel family	-	-	-	ko:K03561	-	-	-	-	ko00000,ko02000	1.A.30.2.1	-	-	MotA_ExbB
DYD3_k127_7172926_10	404589.Anae109_3522	6.228e-08	54.0	COG0437@1|root,COG0437@2|Bacteria,1MU1B@1224|Proteobacteria,42S59@68525|delta/epsilon subdivisions,2WNGW@28221|Deltaproteobacteria	28221|Deltaproteobacteria	C	PFAM 4Fe-4S ferredoxin, iron-sulfur binding domain protein	hybA	-	-	-	-	-	-	-	-	-	-	-	Fer4_11,Fer4_4
DYD3_k127_7172926_4	1123248.KB893348_gene182	5.394e-86	293.0	COG4221@1|root,COG4221@2|Bacteria,4NGDX@976|Bacteroidetes,1INT1@117747|Sphingobacteriia	976|Bacteroidetes	S	Belongs to the short-chain dehydrogenases reductases (SDR) family	-	-	-	-	-	-	-	-	-	-	-	-	adh_short
DYD3_k127_7172926_1	862908.BMS_0934	3.257e-128	421.0	COG0143@1|root,COG0143@2|Bacteria,1MUBY@1224|Proteobacteria,42N1K@68525|delta/epsilon subdivisions,2MSXD@213481|Bdellovibrionales,2WIT6@28221|Deltaproteobacteria	213481|Bdellovibrionales	J	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation	metG	-	6.1.1.10	ko:K01874	ko00450,ko00970,map00450,map00970	M00359,M00360	R03659,R04773	RC00055,RC00523	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	-	-	-	Anticodon_1,tRNA-synt_1g,tRNA_bind
DYD3_k127_7172926_6	862908.BMS_0934	7.103e-70	239.0	COG0143@1|root,COG0143@2|Bacteria,1MUBY@1224|Proteobacteria,42N1K@68525|delta/epsilon subdivisions,2MSXD@213481|Bdellovibrionales,2WIT6@28221|Deltaproteobacteria	213481|Bdellovibrionales	J	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation	metG	-	6.1.1.10	ko:K01874	ko00450,ko00970,map00450,map00970	M00359,M00360	R03659,R04773	RC00055,RC00523	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	-	-	-	Anticodon_1,tRNA-synt_1g,tRNA_bind
DYD3_k127_7172926_0	1201288.M900_1134	6.218e-253	797.0	COG0210@1|root,COG0210@2|Bacteria,1MU0G@1224|Proteobacteria,42MKU@68525|delta/epsilon subdivisions,2MSPS@213481|Bdellovibrionales,2WJR3@28221|Deltaproteobacteria	213481|Bdellovibrionales	L	PFAM UvrD REP helicase	rep	-	3.6.4.12	ko:K03656,ko:K03657	ko03420,ko03430,map03420,map03430	-	-	-	ko00000,ko00001,ko01000,ko03400	-	-	-	UvrD-helicase,UvrD_C
DYD3_k127_7172926_3	264462.Bd2691	8.765e-95	317.0	COG1024@1|root,COG1024@2|Bacteria,1MWF6@1224|Proteobacteria,42QZY@68525|delta/epsilon subdivisions,2MTK8@213481|Bdellovibrionales,2WMN5@28221|Deltaproteobacteria	213481|Bdellovibrionales	I	enoyl-CoA hydratase	-	-	-	-	-	-	-	-	-	-	-	-	ECH_1
DYD3_k127_7172926_2	1201290.M902_2693	2.061e-108	358.0	COG0119@1|root,COG0119@2|Bacteria,1MUMX@1224|Proteobacteria,42Q6T@68525|delta/epsilon subdivisions,2MSWJ@213481|Bdellovibrionales,2WJP1@28221|Deltaproteobacteria	213481|Bdellovibrionales	E	Hydroxymethylglutaryl-CoA lyase	mvaB	-	4.1.3.4	ko:K01640	ko00072,ko00280,ko00281,ko00650,ko01100,ko04146,map00072,map00280,map00281,map00650,map01100,map04146	M00036,M00088	R01360,R08090	RC00502,RC00503,RC01118,RC01946	ko00000,ko00001,ko00002,ko01000	-	-	iAF987.Gmet_3293	HMGL-like
DYD3_k127_7172926_8	1353529.M899_0319	6.617e-23	104.0	COG4770@1|root,COG4770@2|Bacteria,1NG94@1224|Proteobacteria,43DBI@68525|delta/epsilon subdivisions,2MTJ9@213481|Bdellovibrionales,2WSN8@28221|Deltaproteobacteria	213481|Bdellovibrionales	I	Biotin-requiring enzyme	-	-	-	-	-	-	-	-	-	-	-	-	Biotin_lipoyl
DYD3_k127_7172926_5	1353529.M899_0320	1.002e-75	259.0	COG4770@1|root,COG4770@2|Bacteria,1P6RE@1224|Proteobacteria,43BQE@68525|delta/epsilon subdivisions,2MUTJ@213481|Bdellovibrionales,2X71H@28221|Deltaproteobacteria	213481|Bdellovibrionales	I	carboxylase	-	-	6.4.1.3,6.4.1.4,6.4.1.5	ko:K01965,ko:K01968,ko:K13777	ko00280,ko00281,ko00630,ko00640,ko01100,ko01120,ko01130,ko01200,map00280,map00281,map00630,map00640,map01100,map01120,map01130,map01200	M00036,M00373,M00741	R01859,R03494,R04138	RC00097,RC00367,RC00609,RC00942	ko00000,ko00001,ko00002,ko01000	-	-	-	Biotin_carb_C,Biotin_carb_N,Biotin_lipoyl,CPSase_L_D2
DYD3_k127_7189377_4	1206733.BAGC01000043_gene690	3.529e-06	51.0	arCOG06766@1|root,2Z87F@2|Bacteria,2IAM6@201174|Actinobacteria,4G4PP@85025|Nocardiaceae	201174|Actinobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_7189377_2	264462.Bd3258	6.455e-94	314.0	COG3248@1|root,COG3248@2|Bacteria,1RC26@1224|Proteobacteria,42TUR@68525|delta/epsilon subdivisions,2MUDK@213481|Bdellovibrionales,2WQR4@28221|Deltaproteobacteria	213481|Bdellovibrionales	M	Nucleoside-binding outer membrane protein	tsx	-	-	-	-	-	-	-	-	-	-	-	Channel_Tsx,DUF5020
DYD3_k127_7189377_1	264462.Bd3256	3.421e-189	601.0	COG0840@1|root,COG0840@2|Bacteria,1MU9B@1224|Proteobacteria,42M22@68525|delta/epsilon subdivisions,2WM8F@28221|Deltaproteobacteria	28221|Deltaproteobacteria	NT	Chemotaxis sensory transducer	mcp64H-1	-	-	ko:K03406	ko02020,ko02030,map02020,map02030	-	-	-	ko00000,ko00001,ko02035	-	-	-	4HB_MCP_1,HAMP,MCPsignal,PAS_4,dCache_1
DYD3_k127_7189377_3	1353529.M899_2036	2.524e-21	104.0	COG2027@1|root,COG2027@2|Bacteria,1NYDM@1224|Proteobacteria,430BT@68525|delta/epsilon subdivisions,2MU39@213481|Bdellovibrionales,2WW3S@28221|Deltaproteobacteria	213481|Bdellovibrionales	M	D-Ala-D-Ala carboxypeptidase 3 (S13) family	-	-	3.4.16.4	ko:K07259	ko00550,map00550	-	-	-	ko00000,ko00001,ko01000,ko01002,ko01011	-	-	-	Peptidase_S13
DYD3_k127_7193029_1	1201290.M902_0363	5.97e-152	493.0	COG0591@1|root,COG0591@2|Bacteria,1R475@1224|Proteobacteria,42QN0@68525|delta/epsilon subdivisions,2WSG0@28221|Deltaproteobacteria	28221|Deltaproteobacteria	E	Sodium:solute symporter family	-	-	-	ko:K03307	-	-	-	-	ko00000	2.A.21	-	-	SSF
DYD3_k127_7193029_0	760154.Sulba_1096	8.344e-205	653.0	COG0488@1|root,COG0488@2|Bacteria,1MU37@1224|Proteobacteria,42M2A@68525|delta/epsilon subdivisions,2YN8I@29547|Epsilonproteobacteria	29547|Epsilonproteobacteria	S	Abc transporter	-	-	-	ko:K06158	-	-	-	-	ko00000,ko03012	-	-	-	ABC_tran,ABC_tran_Xtn
DYD3_k127_7193029_4	1242864.D187_009424	9.89e-45	184.0	COG3209@1|root,COG3209@2|Bacteria,1Q3W1@1224|Proteobacteria,439Q0@68525|delta/epsilon subdivisions,2X51Z@28221|Deltaproteobacteria,2Z002@29|Myxococcales	28221|Deltaproteobacteria	M	Ig-like domain from next to BRCA1 gene	-	-	-	-	-	-	-	-	-	-	-	-	N_BRCA1_IG
DYD3_k127_7193029_6	1123487.KB892835_gene3521	8.136e-12	77.0	COG3387@1|root,COG3387@2|Bacteria	2|Bacteria	G	glucan 1,4-alpha-glucosidase activity	-	-	-	-	-	-	-	-	-	-	-	-	Bac_rhamnosid6H,Bac_rhamnosid_C
DYD3_k127_7193029_2	246197.MXAN_2308	4.335e-102	341.0	COG3145@1|root,COG3145@2|Bacteria,1N7M0@1224|Proteobacteria,42NG0@68525|delta/epsilon subdivisions,2WKZ7@28221|Deltaproteobacteria	28221|Deltaproteobacteria	L	2OG-Fe(II) oxygenase superfamily	-	-	-	-	-	-	-	-	-	-	-	-	2OG-FeII_Oxy_2
DYD3_k127_7193029_5	1449976.KALB_3025	2.704e-40	165.0	COG0454@1|root,COG0456@2|Bacteria,2GJ68@201174|Actinobacteria,4E1Y7@85010|Pseudonocardiales	201174|Actinobacteria	K	acetyltransferase	-	-	-	-	-	-	-	-	-	-	-	-	Acetyltransf_1
DYD3_k127_7193029_3	862908.BMS_0637	2.452e-60	220.0	COG1541@1|root,COG1541@2|Bacteria,1NR5G@1224|Proteobacteria,42RJ3@68525|delta/epsilon subdivisions,2X7WI@28221|Deltaproteobacteria	28221|Deltaproteobacteria	H	Acyl-protein synthetase, LuxE	-	-	-	-	-	-	-	-	-	-	-	-	LuxE
DYD3_k127_7198093_0	439235.Dalk_3156	3.612e-250	777.0	COG1053@1|root,COG1053@2|Bacteria,1MU5M@1224|Proteobacteria,42M81@68525|delta/epsilon subdivisions,2WIJ5@28221|Deltaproteobacteria,2MHSR@213118|Desulfobacterales	28221|Deltaproteobacteria	C	TIGRFAM succinate dehydrogenase or fumarate reductase, flavoprotein subunit	frdA	-	1.3.5.1,1.3.5.4	ko:K00239	ko00020,ko00190,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko05134,map00020,map00190,map00650,map00720,map01100,map01110,map01120,map01130,map01200,map05134	M00009,M00011,M00149,M00173,M00374,M00376	R02164	RC00045	ko00000,ko00001,ko00002,ko01000	-	-	-	FAD_binding_2,Succ_DH_flav_C
DYD3_k127_7198093_2	1201290.M902_3245	1.139e-67	237.0	2CAZH@1|root,2Z7RU@2|Bacteria,1N3AE@1224|Proteobacteria,42UBH@68525|delta/epsilon subdivisions,2MT2C@213481|Bdellovibrionales,2WQ56@28221|Deltaproteobacteria	213481|Bdellovibrionales	-	-	sdhC	-	-	ko:K00241	ko00020,ko00190,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00190,map00650,map00720,map01100,map01110,map01120,map01130,map01200	M00009,M00011,M00149,M00173,M00374,M00376	R02164	RC00045	ko00000,ko00001,ko00002	-	-	-	-
DYD3_k127_7198093_1	582744.Msip34_2176	3.682e-134	441.0	COG0415@1|root,COG0415@2|Bacteria,1MV9Y@1224|Proteobacteria,2VITS@28216|Betaproteobacteria,2KKBP@206350|Nitrosomonadales	206350|Nitrosomonadales	L	PFAM DNA photolyase FAD-binding	-	-	4.1.99.3	ko:K01669	-	-	-	-	ko00000,ko01000,ko03400	-	-	-	DNA_photolyase,FAD_binding_7
DYD3_k127_7198093_3	862908.BMS_2940	9.31e-05	46.0	COG3177@1|root,COG3177@2|Bacteria,1NQRT@1224|Proteobacteria,42YCS@68525|delta/epsilon subdivisions,2MTSZ@213481|Bdellovibrionales,2WUD0@28221|Deltaproteobacteria	213481|Bdellovibrionales	S	Fic/DOC family	-	-	-	-	-	-	-	-	-	-	-	-	Fic
DYD3_k127_7201577_1	926569.ANT_25850	1.312e-37	144.0	COG0265@1|root,COG0265@2|Bacteria,2G6KG@200795|Chloroflexi	200795|Chloroflexi	O	PFAM peptidase S1 and S6, chymotrypsin Hap	-	-	3.4.21.107	ko:K04771	ko01503,ko02020,map01503,map02020	M00728	-	-	ko00000,ko00001,ko00002,ko01000,ko01002,ko03110	-	-	-	PDZ_2,Trypsin_2
DYD3_k127_7201577_0	862908.BMS_0105	2.171e-166	550.0	COG1193@1|root,COG1193@2|Bacteria,1QUJI@1224|Proteobacteria,42P7P@68525|delta/epsilon subdivisions,2MT05@213481|Bdellovibrionales,2WK5H@28221|Deltaproteobacteria	213481|Bdellovibrionales	L	Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity	mutS2	-	-	ko:K07456	ko03430,map03430	-	-	-	ko00000,ko00001,ko03400	-	-	-	MutS_V,Smr
DYD3_k127_7208144_18	862908.BMS_2735	8.64e-60	214.0	COG0811@1|root,COG0811@2|Bacteria,1NCWW@1224|Proteobacteria,42PKF@68525|delta/epsilon subdivisions,2MTTC@213481|Bdellovibrionales,2WNQ4@28221|Deltaproteobacteria	213481|Bdellovibrionales	U	MotA TolQ ExbB proton channel	aglX	-	-	ko:K03562	ko01120,map01120	-	-	-	ko00000,ko02000	1.A.30.2.2	-	-	MotA_ExbB
DYD3_k127_7208144_1	1353529.M899_2766	8.818e-187	591.0	COG2956@1|root,COG2956@2|Bacteria,1MVDP@1224|Proteobacteria,42UW4@68525|delta/epsilon subdivisions,2WR5T@28221|Deltaproteobacteria	28221|Deltaproteobacteria	G	Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane	-	-	-	ko:K19804	-	-	-	-	ko00000	-	-	-	TPR_16,TPR_2,TPR_7,TPR_8
DYD3_k127_7208144_13	1353529.M899_2767	1.361e-89	304.0	COG0616@1|root,COG0616@2|Bacteria,1MUXE@1224|Proteobacteria,42MNA@68525|delta/epsilon subdivisions,2MUP6@213481|Bdellovibrionales,2WK7Z@28221|Deltaproteobacteria	213481|Bdellovibrionales	OU	signal peptide peptidase SppA, 36K type	sppA	-	-	ko:K04773	-	-	-	-	ko00000,ko01000,ko01002	-	-	-	Peptidase_S49
DYD3_k127_7208144_9	449447.MAE_23940	2.891e-125	416.0	COG1502@1|root,COG1555@1|root,COG1502@2|Bacteria,COG1555@2|Bacteria,1G01I@1117|Cyanobacteria	1117|Cyanobacteria	I	Phospholipase D Transphosphatidylase	comA	-	-	-	-	-	-	-	-	-	-	-	HHH_3,PLDc_2
DYD3_k127_7208144_4	862908.BMS_2742	9.279e-153	492.0	COG0820@1|root,COG0820@2|Bacteria,1MUYK@1224|Proteobacteria,42N69@68525|delta/epsilon subdivisions,2MTP6@213481|Bdellovibrionales,2WIUJ@28221|Deltaproteobacteria	213481|Bdellovibrionales	J	Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs	rlmN	GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0006139,GO:0006364,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016740,GO:0016741,GO:0022613,GO:0030488,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0070475,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140101,GO:0140102,GO:1901360	2.1.1.192	ko:K06941	-	-	-	-	ko00000,ko01000,ko03009	-	-	-	Fer4_14,Radical_SAM
DYD3_k127_7208144_0	862908.BMS_2749	2.548e-193	609.0	COG1960@1|root,COG1960@2|Bacteria,1MUDR@1224|Proteobacteria,42M0R@68525|delta/epsilon subdivisions,2MSUE@213481|Bdellovibrionales,2WJE6@28221|Deltaproteobacteria	213481|Bdellovibrionales	C	PFAM acyl-CoA dehydrogenase domain protein	-	-	1.3.8.4	ko:K00253	ko00280,ko01100,map00280,map01100	M00036	R04095	RC00246	ko00000,ko00001,ko00002,ko01000	-	-	-	Acyl-CoA_dh_1,Acyl-CoA_dh_M,Acyl-CoA_dh_N
DYD3_k127_7208144_2	1201288.M900_2125	4.079e-176	559.0	COG1960@1|root,COG1960@2|Bacteria,1MUDR@1224|Proteobacteria,42MK5@68525|delta/epsilon subdivisions,2MSRZ@213481|Bdellovibrionales,2WJ3Z@28221|Deltaproteobacteria	213481|Bdellovibrionales	C	acyl-coa dehydrogenase	-	-	-	-	-	-	-	-	-	-	-	-	Acyl-CoA_dh_1,Acyl-CoA_dh_M,Acyl-CoA_dh_N
DYD3_k127_7208144_10	1353529.M899_2788	2.979e-120	400.0	COG0166@1|root,COG0166@2|Bacteria,1MUFP@1224|Proteobacteria,42MNB@68525|delta/epsilon subdivisions,2MT2M@213481|Bdellovibrionales,2WIXQ@28221|Deltaproteobacteria	213481|Bdellovibrionales	G	Belongs to the GPI family	pgi	-	2.2.1.2,5.3.1.9	ko:K01810,ko:K13810	ko00010,ko00030,ko00500,ko00520,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00030,map00500,map00520,map01100,map01110,map01120,map01130,map01200,map01230	M00001,M00004,M00007,M00114	R01827,R02739,R02740,R03321	RC00376,RC00439,RC00563,RC00604	ko00000,ko00001,ko00002,ko01000,ko04147	-	-	-	PGI
DYD3_k127_7208144_5	1353529.M899_2789	4.577e-141	453.0	COG1716@1|root,COG2199@1|root,COG1716@2|Bacteria,COG3706@2|Bacteria,1MZV7@1224|Proteobacteria,42SA7@68525|delta/epsilon subdivisions,2MSXB@213481|Bdellovibrionales,2WNRU@28221|Deltaproteobacteria	213481|Bdellovibrionales	T	GGDEF domain	-	-	-	-	-	-	-	-	-	-	-	-	FHA,GGDEF,Yop-YscD_cpl
DYD3_k127_7208144_14	1353529.M899_2790	4.014e-89	313.0	COG0323@1|root,COG0323@2|Bacteria,1MV61@1224|Proteobacteria,42MFX@68525|delta/epsilon subdivisions,2MSXQ@213481|Bdellovibrionales,2WJ91@28221|Deltaproteobacteria	213481|Bdellovibrionales	L	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex	mutL	GO:0003674,GO:0003676,GO:0003677,GO:0003697,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0032300,GO:0032991,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1990391	-	ko:K03572	ko03430,map03430	-	-	-	ko00000,ko00001,ko03400	-	-	-	DNA_mis_repair,HATPase_c_3,MutL_C
DYD3_k127_7208144_12	1353529.M899_2791	5.505e-94	317.0	COG0324@1|root,COG0324@2|Bacteria,1MUB2@1224|Proteobacteria,42M7V@68525|delta/epsilon subdivisions,2MT6I@213481|Bdellovibrionales,2WIUB@28221|Deltaproteobacteria	213481|Bdellovibrionales	J	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)	miaA	GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016765,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0052381,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360	2.5.1.75	ko:K00791	ko00908,ko01100,ko01110,map00908,map01100,map01110	-	R01122	RC02820	ko00000,ko00001,ko01000,ko01006,ko03016	-	-	-	IPPT
DYD3_k127_7208144_6	1123368.AUIS01000041_gene7	2.91e-138	447.0	COG1858@1|root,COG1858@2|Bacteria,1MV70@1224|Proteobacteria,1RPPQ@1236|Gammaproteobacteria,2NDNG@225057|Acidithiobacillales	225057|Acidithiobacillales	C	Di-haem cytochrome c peroxidase	-	-	1.11.1.5	ko:K00428	-	-	-	-	ko00000,ko01000	-	-	-	CCP_MauG
DYD3_k127_7208144_8	862908.BMS_2756	6.128e-127	411.0	COG1806@1|root,COG1806@2|Bacteria,1MUHU@1224|Proteobacteria,42RV7@68525|delta/epsilon subdivisions,2MSWX@213481|Bdellovibrionales,2WNZT@28221|Deltaproteobacteria	213481|Bdellovibrionales	F	Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the pyruvate, phosphate dikinase (PPDK) by catalyzing its phosphorylation dephosphorylation	-	-	2.7.11.33,2.7.4.28	ko:K09773	-	-	-	-	ko00000,ko01000	-	-	-	Kinase-PPPase
DYD3_k127_7208144_3	1201290.M902_1990	2.954e-164	538.0	COG0515@1|root,COG0515@2|Bacteria,1MV1P@1224|Proteobacteria,42QEI@68525|delta/epsilon subdivisions,2MSSB@213481|Bdellovibrionales,2WM5N@28221|Deltaproteobacteria	213481|Bdellovibrionales	KLT	Serine Threonine protein kinase	-	-	2.7.11.1	ko:K12132	-	-	-	-	ko00000,ko01000,ko01001	-	-	-	PEGA,Pkinase
DYD3_k127_7208144_20	1120973.AQXL01000116_gene322	2.355e-26	119.0	COG2267@1|root,COG2267@2|Bacteria,1UZ5S@1239|Firmicutes,4HEHP@91061|Bacilli,2797U@186823|Alicyclobacillaceae	91061|Bacilli	I	Serine aminopeptidase, S33	-	-	-	-	-	-	-	-	-	-	-	-	Hydrolase_4
DYD3_k127_7208144_16	1201288.M900_2134	8.793e-77	265.0	2DE5X@1|root,2ZKMM@2|Bacteria,1Q6D8@1224|Proteobacteria,432X9@68525|delta/epsilon subdivisions,2MTDM@213481|Bdellovibrionales,2WXK0@28221|Deltaproteobacteria	213481|Bdellovibrionales	S	Domain of unknown function (DUF4339)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4339,PilZ
DYD3_k127_7208144_15	1201288.M900_2137	1.953e-80	280.0	COG0664@1|root,COG0664@2|Bacteria	2|Bacteria	T	cyclic nucleotide binding	-	-	-	ko:K10914	ko02020,ko02024,ko02025,ko02026,ko05111,map02020,map02024,map02025,map02026,map05111	-	-	-	ko00000,ko00001,ko03000	-	-	-	HATPase_c,HTH_Crp_2,HisKA,cNMP_binding
DYD3_k127_7208144_7	765869.BDW_07130	8.493e-135	440.0	COG0183@1|root,COG0183@2|Bacteria,1MU5G@1224|Proteobacteria,42MSR@68525|delta/epsilon subdivisions,2MSP4@213481|Bdellovibrionales,2WIXG@28221|Deltaproteobacteria	213481|Bdellovibrionales	I	Belongs to the thiolase family	bamN	-	2.3.1.9	ko:K00626	ko00071,ko00072,ko00280,ko00310,ko00362,ko00380,ko00620,ko00630,ko00640,ko00650,ko00720,ko00900,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,ko02020,map00071,map00072,map00280,map00310,map00362,map00380,map00620,map00630,map00640,map00650,map00720,map00900,map01100,map01110,map01120,map01130,map01200,map01212,map02020	M00088,M00095,M00373,M00374,M00375	R00238,R01177	RC00004,RC00326	ko00000,ko00001,ko00002,ko01000,ko04147	-	-	-	Thiolase_C,Thiolase_N
DYD3_k127_7221720_10	862908.BMS_1857	2.554e-80	276.0	COG1141@1|root,COG1141@2|Bacteria	2|Bacteria	C	electron transfer activity	-	-	-	ko:K05337	-	-	-	-	ko00000	-	-	-	Fer4_13,Fer4_15
DYD3_k127_7221720_20	1121920.AUAU01000006_gene348	2.012e-11	74.0	COG0204@1|root,COG0204@2|Bacteria,3Y49D@57723|Acidobacteria	57723|Acidobacteria	I	Phosphate acyltransferases	-	-	2.3.1.51	ko:K00655	ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110	M00089	R02241,R09381	RC00004,RC00037,RC00039	ko00000,ko00001,ko00002,ko01000,ko01004	-	-	-	Acyltransferase
DYD3_k127_7221720_12	862908.BMS_1858	6.841e-71	251.0	COG0130@1|root,COG0130@2|Bacteria,1MV0N@1224|Proteobacteria,42MU5@68525|delta/epsilon subdivisions,2MT9V@213481|Bdellovibrionales,2WKWY@28221|Deltaproteobacteria	213481|Bdellovibrionales	J	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs	truB	GO:0001522,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016071,GO:0016556,GO:0016853,GO:0016866,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:1901360,GO:1990481	5.4.99.25	ko:K03177	-	-	-	-	ko00000,ko01000,ko03016	-	-	-	TruB_C,TruB_C_2,TruB_N
DYD3_k127_7221720_18	1201288.M900_A0299	1.86e-24	106.0	COG0858@1|root,COG0858@2|Bacteria,1MZPE@1224|Proteobacteria,42U0Y@68525|delta/epsilon subdivisions,2WR00@28221|Deltaproteobacteria	28221|Deltaproteobacteria	J	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA	rbfA	-	-	ko:K02834	-	-	-	-	ko00000,ko03009	-	-	-	RBFA
DYD3_k127_7221720_1	1201288.M900_A0298	1.142e-283	897.0	COG0532@1|root,COG0532@2|Bacteria,1MV26@1224|Proteobacteria,42M5Q@68525|delta/epsilon subdivisions,2MSMK@213481|Bdellovibrionales,2WIIX@28221|Deltaproteobacteria	213481|Bdellovibrionales	J	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex	infB	-	-	ko:K02519	-	-	-	-	ko00000,ko03012,ko03029	-	-	-	GTP_EFTU,IF-2,IF2_N
DYD3_k127_7221720_3	1201290.M902_3299	6.578e-203	641.0	COG0195@1|root,COG0195@2|Bacteria,1MWT7@1224|Proteobacteria,42MUW@68525|delta/epsilon subdivisions,2MSM7@213481|Bdellovibrionales,2WIXI@28221|Deltaproteobacteria	213481|Bdellovibrionales	K	Participates in both transcription termination and antitermination	nusA	-	-	ko:K02600	-	-	-	-	ko00000,ko03009,ko03021	-	-	-	HHH_5,KH_5,NusA_N,S1
DYD3_k127_7221720_15	1353529.M899_1575	2.745e-41	159.0	COG0779@1|root,COG0779@2|Bacteria,1RDP2@1224|Proteobacteria,42THF@68525|delta/epsilon subdivisions,2MTCW@213481|Bdellovibrionales,2WQ0W@28221|Deltaproteobacteria	213481|Bdellovibrionales	J	Required for maturation of 30S ribosomal subunits	rimP	-	-	ko:K09748	-	-	-	-	ko00000,ko03009	-	-	-	DUF150,DUF150_C
DYD3_k127_7221720_21	1227499.C493_12759	5.927e-08	61.0	COG0456@1|root,arCOG00833@2157|Archaea,2Y0G0@28890|Euryarchaeota,23WBW@183963|Halobacteria	183963|Halobacteria	K	COG0456 Acetyltransferases	-	-	2.3.1.128	ko:K03789	-	-	-	-	ko00000,ko01000,ko03009	-	-	-	Acetyltransf_1
DYD3_k127_7221720_4	862908.BMS_1865	1.668e-135	444.0	COG0457@1|root,COG0745@1|root,COG0457@2|Bacteria,COG0745@2|Bacteria,1NGDN@1224|Proteobacteria,42XA5@68525|delta/epsilon subdivisions,2MT04@213481|Bdellovibrionales,2WSZP@28221|Deltaproteobacteria	213481|Bdellovibrionales	K	Transcriptional regulatory protein, C terminal	-	-	-	-	-	-	-	-	-	-	-	-	TPR_8,Trans_reg_C
DYD3_k127_7221720_2	1353529.M899_1571	3.106e-274	853.0	COG0441@1|root,COG0441@2|Bacteria,1MUP2@1224|Proteobacteria,42M20@68525|delta/epsilon subdivisions,2MSS5@213481|Bdellovibrionales,2WJ2N@28221|Deltaproteobacteria	213481|Bdellovibrionales	J	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)	thrS	-	6.1.1.3	ko:K01868	ko00970,map00970	M00359,M00360	R03663	RC00055,RC00523	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	-	-	-	HGTP_anticodon,TGS,tRNA-synt_2b,tRNA_SAD
DYD3_k127_7221720_6	1353529.M899_1570	2.581e-106	355.0	COG1181@1|root,COG1181@2|Bacteria,1MUTB@1224|Proteobacteria,42NF2@68525|delta/epsilon subdivisions,2MTHS@213481|Bdellovibrionales,2WJ7Q@28221|Deltaproteobacteria	213481|Bdellovibrionales	F	Belongs to the D-alanine--D-alanine ligase family	ddl	-	6.3.2.4	ko:K01921	ko00473,ko00550,ko01100,ko01502,map00473,map00550,map01100,map01502	-	R01150	RC00064,RC00141	ko00000,ko00001,ko01000,ko01011	-	-	-	Dala_Dala_lig_C,Dala_Dala_lig_N
DYD3_k127_7221720_14	862908.BMS_2381	4.372e-66	238.0	COG2206@1|root,COG2206@2|Bacteria	2|Bacteria	T	PFAM metal-dependent phosphohydrolase, HD sub domain	cnpD3	-	3.6.1.11,3.6.1.40	ko:K01524,ko:K07016	ko00230,map00230	-	R03409	RC00002	ko00000,ko00001,ko01000,ko02048	-	-	-	HD,HD_5
DYD3_k127_7221720_5	862908.BMS_1997	3.107e-125	415.0	COG0491@1|root,COG0494@1|root,COG0491@2|Bacteria,COG0494@2|Bacteria,1MVC3@1224|Proteobacteria,430H1@68525|delta/epsilon subdivisions,2WVZX@28221|Deltaproteobacteria	28221|Deltaproteobacteria	L	Metallo-beta-lactamase superfamily	-	-	-	-	-	-	-	-	-	-	-	-	Lactamase_B,NUDIX
DYD3_k127_7221720_0	862908.BMS_1998	0.0	1383.0	COG1014@1|root,COG4231@1|root,COG1014@2|Bacteria,COG4231@2|Bacteria,1MUKS@1224|Proteobacteria,42N44@68525|delta/epsilon subdivisions,2WIX6@28221|Deltaproteobacteria	28221|Deltaproteobacteria	C	Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates	-	-	1.2.7.8	ko:K00179,ko:K04090	-	-	-	-	br01601,ko00000,ko01000	-	-	-	Fer4,POR,POR_N,TPP_enzyme_C
DYD3_k127_7221720_11	862908.BMS_1128	9.96e-73	248.0	COG1432@1|root,COG1432@2|Bacteria,1QC1U@1224|Proteobacteria,42TAH@68525|delta/epsilon subdivisions,2WPYX@28221|Deltaproteobacteria	28221|Deltaproteobacteria	S	NYN domain	-	-	-	-	-	-	-	-	-	-	-	-	NYN
DYD3_k127_7221720_16	983545.Glaag_0187	2.209e-37	149.0	COG1225@1|root,COG1225@2|Bacteria,1MWFZ@1224|Proteobacteria,1RZ28@1236|Gammaproteobacteria,467IY@72275|Alteromonadaceae	1236|Gammaproteobacteria	O	Redoxin	-	-	-	-	-	-	-	-	-	-	-	-	AhpC-TSA
DYD3_k127_7221720_13	1454007.JAUG01000057_gene4514	1.276e-68	242.0	COG0730@1|root,COG0730@2|Bacteria,4NKPI@976|Bacteroidetes,1ISM8@117747|Sphingobacteriia	976|Bacteroidetes	S	PFAM Sulfite exporter TauE SafE	-	-	-	ko:K07090	-	-	-	-	ko00000	-	-	-	TauE
DYD3_k127_7221720_9	1454004.AW11_02489	2.968e-91	309.0	COG0226@1|root,COG0226@2|Bacteria,1MVXP@1224|Proteobacteria,2VTJU@28216|Betaproteobacteria	28216|Betaproteobacteria	P	PBP superfamily domain	-	-	-	ko:K02040	ko02010,ko02020,ko05152,map02010,map02020,map05152	M00222	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.7	-	-	PBP_like_2
DYD3_k127_7221720_7	517418.Ctha_0918	1.211e-102	345.0	COG0573@1|root,COG0573@2|Bacteria,1FE1M@1090|Chlorobi	1090|Chlorobi	P	TIGRFAM phosphate ABC transporter, inner membrane subunit PstC	-	-	-	ko:K02037	ko02010,map02010	M00222	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.7	-	-	BPD_transp_1
DYD3_k127_7221720_8	522306.CAP2UW1_1750	2.663e-93	314.0	COG0581@1|root,COG0581@2|Bacteria,1MUWB@1224|Proteobacteria,2VH6Y@28216|Betaproteobacteria	28216|Betaproteobacteria	P	phosphate transport system permease	pstA	-	-	ko:K02038	ko02010,map02010	M00222	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.7	-	-	BPD_transp_1
DYD3_k127_7221720_17	357809.Cphy_1670	3.693e-26	111.0	COG1117@1|root,COG1117@2|Bacteria,1VR9J@1239|Firmicutes,24XMR@186801|Clostridia,222MS@1506553|Lachnoclostridium	186801|Clostridia	P	Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system	-	-	-	-	-	-	-	-	-	-	-	-	ABC_tran
DYD3_k127_723643_5	862908.BMS_2250	1.228e-64	239.0	COG0649@1|root,COG0852@1|root,COG0649@2|Bacteria,COG0852@2|Bacteria,1MVIN@1224|Proteobacteria,42M9G@68525|delta/epsilon subdivisions,2MSRT@213481|Bdellovibrionales,2WIS7@28221|Deltaproteobacteria	213481|Bdellovibrionales	C	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient	-	-	1.6.5.3	ko:K13378	ko00190,ko01100,map00190,map01100	M00144	R11945	RC00061	ko00000,ko00001,ko00002,ko01000	3.D.1	-	-	Complex1_49kDa
DYD3_k127_723643_3	862908.BMS_2252	1.164e-72	263.0	COG0221@1|root,COG0221@2|Bacteria	2|Bacteria	C	inorganic diphosphatase activity	ppa	-	3.6.1.1	ko:K01507	ko00190,map00190	-	-	-	ko00000,ko00001,ko01000	-	-	-	NUDIX,Pyrophosphatase
DYD3_k127_723643_0	226185.EF_2248	7.653e-94	328.0	COG4886@1|root,COG4886@2|Bacteria,1UYD7@1239|Firmicutes,4HHUD@91061|Bacilli,4AZPQ@81852|Enterococcaceae	91061|Bacilli	O	Mycoplasma protein of unknown function, DUF285	-	-	-	-	-	-	-	-	-	-	-	-	DUF285,Flg_new,LRR_5,MucBP,WxL
DYD3_k127_723643_11	862908.BMS_1968	2.214e-16	94.0	COG3266@1|root,COG3266@2|Bacteria,1QZBM@1224|Proteobacteria,42TG7@68525|delta/epsilon subdivisions,2WQPM@28221|Deltaproteobacteria	28221|Deltaproteobacteria	S	FG-GAP repeat	-	-	-	-	-	-	-	-	-	-	-	-	FG-GAP_2
DYD3_k127_723643_1	1384065.JAGS01000001_gene1189	1.306e-93	334.0	COG4886@1|root,COG4886@2|Bacteria,1UYD7@1239|Firmicutes,24F4M@186801|Clostridia,3WKYY@541000|Ruminococcaceae	186801|Clostridia	G	Fibronectin type III domain protein	-	-	-	-	-	-	-	-	-	-	-	-	DUF285,Dockerin_1,LRR_5
DYD3_k127_723643_6	269797.Mbar_A1532	7.593e-57	205.0	COG1926@1|root,arCOG06847@2157|Archaea,2XWRW@28890|Euryarchaeota,2NABG@224756|Methanomicrobia	224756|Methanomicrobia	S	Dienelactone hydrolase family	-	-	-	-	-	-	-	-	-	-	-	-	DLH
DYD3_k127_723643_7	323848.Nmul_A0900	1.607e-46	176.0	COG1926@1|root,COG1926@2|Bacteria,1RAG8@1224|Proteobacteria,2VPNZ@28216|Betaproteobacteria,372RS@32003|Nitrosomonadales	28216|Betaproteobacteria	F	Phosphoribosyl transferase domain	-	-	-	-	-	-	-	-	-	-	-	-	Pribosyltran
DYD3_k127_723643_10	10116.ENSRNOP00000018116	4.389e-24	118.0	KOG3544@1|root,KOG3544@2759|Eukaryota,38B96@33154|Opisthokonta,3BIYR@33208|Metazoa,3CWBT@33213|Bilateria,48611@7711|Chordata,494Z7@7742|Vertebrata,3JEH9@40674|Mammalia,35FX3@314146|Euarchontoglires,4Q36H@9989|Rodentia	33208|Metazoa	W	cartilage development	COL9A1	GO:0001501,GO:0001894,GO:0002062,GO:0003416,GO:0003417,GO:0003674,GO:0005198,GO:0005201,GO:0005575,GO:0005576,GO:0005581,GO:0005593,GO:0005594,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005788,GO:0007275,GO:0008150,GO:0009653,GO:0009887,GO:0009888,GO:0009987,GO:0012505,GO:0016043,GO:0030020,GO:0030154,GO:0030198,GO:0031974,GO:0032501,GO:0032502,GO:0032991,GO:0035265,GO:0040007,GO:0042592,GO:0043062,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0044422,GO:0044424,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0048513,GO:0048589,GO:0048705,GO:0048731,GO:0048856,GO:0048869,GO:0048871,GO:0051216,GO:0060249,GO:0060348,GO:0060349,GO:0060350,GO:0060351,GO:0061448,GO:0065007,GO:0065008,GO:0070013,GO:0071840,GO:0098868	-	ko:K08131	ko04151,ko04510,ko04512,ko04974,ko05165,map04151,map04510,map04512,map04974,map05165	-	-	-	ko00000,ko00001,ko00535,ko04516	-	-	-	Collagen
DYD3_k127_723643_4	862908.BMS_2851	1.398e-67	261.0	COG4254@1|root,COG4254@2|Bacteria,1QVB5@1224|Proteobacteria,42XP1@68525|delta/epsilon subdivisions,2MUHH@213481|Bdellovibrionales,2X71D@28221|Deltaproteobacteria	213481|Bdellovibrionales	S	FecR protein	-	-	-	-	-	-	-	-	-	-	-	-	FecR
DYD3_k127_723643_2	862908.BMS_2850	2.65e-83	296.0	COG2172@1|root,COG2208@1|root,COG3850@1|root,COG2172@2|Bacteria,COG2208@2|Bacteria,COG3850@2|Bacteria,1MXJQ@1224|Proteobacteria,42U7B@68525|delta/epsilon subdivisions,2MTVA@213481|Bdellovibrionales,2WQA7@28221|Deltaproteobacteria	213481|Bdellovibrionales	KT	SMART protein phosphatase 2C domain protein	-	-	3.1.3.3	ko:K07315	-	-	-	-	ko00000,ko01000,ko03021	-	-	-	HAMP,SpoIIE
DYD3_k127_723643_8	862908.BMS_2850	8.738e-35	145.0	COG2172@1|root,COG2208@1|root,COG3850@1|root,COG2172@2|Bacteria,COG2208@2|Bacteria,COG3850@2|Bacteria,1MXJQ@1224|Proteobacteria,42U7B@68525|delta/epsilon subdivisions,2MTVA@213481|Bdellovibrionales,2WQA7@28221|Deltaproteobacteria	213481|Bdellovibrionales	KT	SMART protein phosphatase 2C domain protein	-	-	3.1.3.3	ko:K07315	-	-	-	-	ko00000,ko01000,ko03021	-	-	-	HAMP,SpoIIE
DYD3_k127_723643_9	862908.BMS_2849	1.341e-33	136.0	COG1366@1|root,COG1366@2|Bacteria,1NG3I@1224|Proteobacteria,42W69@68525|delta/epsilon subdivisions,2MUAP@213481|Bdellovibrionales,2WS39@28221|Deltaproteobacteria	213481|Bdellovibrionales	T	Belongs to the anti-sigma-factor antagonist family	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_724397_1	1201290.M902_2369	9.768e-47	174.0	COG2518@1|root,COG2518@2|Bacteria,1MXQC@1224|Proteobacteria,42QSI@68525|delta/epsilon subdivisions,2MTZW@213481|Bdellovibrionales,2WR7X@28221|Deltaproteobacteria	213481|Bdellovibrionales	J	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins	pcm	-	2.1.1.77	ko:K00573	-	-	-	-	ko00000,ko01000	-	-	-	PCMT
DYD3_k127_724397_0	1201288.M900_0970	8.899e-191	610.0	COG1283@1|root,COG1283@2|Bacteria,1MUDE@1224|Proteobacteria,42PW9@68525|delta/epsilon subdivisions,2MT1U@213481|Bdellovibrionales,2WJTI@28221|Deltaproteobacteria	213481|Bdellovibrionales	P	PFAM Na Pi-cotransporter	-	-	-	ko:K03324	-	-	-	-	ko00000,ko02000	2.A.58.2	-	-	Na_Pi_cotrans,PhoU
DYD3_k127_724397_2	1353529.M899_2118	1.917e-39	151.0	COG0373@1|root,COG0373@2|Bacteria,1QS8F@1224|Proteobacteria,437H1@68525|delta/epsilon subdivisions,2MT7N@213481|Bdellovibrionales,2X2QD@28221|Deltaproteobacteria	213481|Bdellovibrionales	H	Glutamyl-tRNAGlu reductase, N-terminal domain	-	-	1.2.1.70	ko:K02492	ko00860,ko01100,ko01110,ko01120,map00860,map01100,map01110,map01120	M00121	R04109	RC00055,RC00149	ko00000,ko00001,ko00002,ko01000	-	-	-	GlutR_N,Shikimate_DH
DYD3_k127_780688_0	316067.Geob_1241	2.636e-160	520.0	COG1530@1|root,COG1530@2|Bacteria,1MV65@1224|Proteobacteria,42M5E@68525|delta/epsilon subdivisions,2WIV6@28221|Deltaproteobacteria,43TM0@69541|Desulfuromonadales	28221|Deltaproteobacteria	J	TIGRFAM ribonuclease, Rne Rng family	cafA	-	3.1.26.12	ko:K08300,ko:K08301	ko03018,map03018	M00394	-	-	ko00000,ko00001,ko00002,ko01000,ko03009,ko03019	-	-	-	RNase_E_G,S1
DYD3_k127_780688_1	1453500.AT05_08920	5.415e-152	491.0	COG1972@1|root,COG1972@2|Bacteria,4NEYN@976|Bacteroidetes,1HY0T@117743|Flavobacteriia	976|Bacteroidetes	F	nucleoside transporter	nupC	-	-	ko:K03317	-	-	-	-	ko00000	2.A.41	-	-	Gate,Nucleos_tra2_C,Nucleos_tra2_N
DYD3_k127_780688_3	1201288.M900_2088	3.285e-20	97.0	291CJ@1|root,2ZNZF@2|Bacteria,1P8FP@1224|Proteobacteria,4331X@68525|delta/epsilon subdivisions,2MUKW@213481|Bdellovibrionales,2WXQJ@28221|Deltaproteobacteria	213481|Bdellovibrionales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_780688_2	1201290.M902_2095	1.103e-118	388.0	COG0213@1|root,COG0213@2|Bacteria,1MV3H@1224|Proteobacteria,42PCD@68525|delta/epsilon subdivisions,2MSPY@213481|Bdellovibrionales,2WKGQ@28221|Deltaproteobacteria	213481|Bdellovibrionales	F	The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis	pdp	-	2.4.2.2,2.4.2.4	ko:K00756,ko:K00758	ko00240,ko00983,ko01100,ko05219,map00240,map00983,map01100,map05219	-	R01570,R01876,R02296,R02484,R08222,R08230	RC00063	ko00000,ko00001,ko01000	-	-	-	Glycos_trans_3N,Glycos_transf_3,PYNP_C
DYD3_k127_84428_0	264462.Bd0395	4.692e-102	340.0	COG0477@1|root,COG2814@2|Bacteria,1MW19@1224|Proteobacteria,42KZ4@68525|delta/epsilon subdivisions,2MTJT@213481|Bdellovibrionales,2WKT2@28221|Deltaproteobacteria	213481|Bdellovibrionales	EGP	drug resistance transporter, Bcr CflA	-	-	-	ko:K07552	-	-	-	-	ko00000,ko02000	2.A.1.2	-	-	MFS_1
DYD3_k127_84428_2	292563.Cyast_1529	8.047e-39	153.0	COG0431@1|root,COG0431@2|Bacteria	2|Bacteria	S	FMN reductase (NADPH) activity	-	-	1.5.1.38	ko:K00299,ko:K11811	ko00740,ko00920,ko01100,map00740,map00920,map01100	-	R05706,R07210,R10206	RC00126,RC01779,RC02556	ko00000,ko00001,ko01000	-	-	-	FMN_red
DYD3_k127_84428_3	1353529.M899_2773	5.986e-34	141.0	COG3021@1|root,COG3021@2|Bacteria,1MVPP@1224|Proteobacteria,42TM7@68525|delta/epsilon subdivisions,2WS2K@28221|Deltaproteobacteria	28221|Deltaproteobacteria	S	Endonuclease/Exonuclease/phosphatase family	-	-	-	-	-	-	-	-	-	-	-	-	Exo_endo_phos
DYD3_k127_84428_1	32057.KB217478_gene2925	7.671e-40	154.0	COG0300@1|root,COG0300@2|Bacteria,1GCI7@1117|Cyanobacteria,1HM27@1161|Nostocales	1117|Cyanobacteria	S	Belongs to the short-chain dehydrogenases reductases (SDR) family	-	-	1.1.1.100	ko:K00059,ko:K07124	ko00061,ko00333,ko00780,ko01040,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01040,map01100,map01130,map01212	M00083,M00572	R04533,R04534,R04536,R04543,R04566,R04953,R04964,R07759,R07763,R10116,R10120,R11671	RC00029,RC00117	ko00000,ko00001,ko00002,ko01000,ko01004	-	-	-	adh_short
DYD3_k127_858279_43	1184267.A11Q_2423	0.0002045	45.0	COG1403@1|root,COG1403@2|Bacteria,1P9DV@1224|Proteobacteria,432XA@68525|delta/epsilon subdivisions,2WXXR@28221|Deltaproteobacteria	28221|Deltaproteobacteria	L	HNH nucleases	-	-	-	-	-	-	-	-	-	-	-	-	HNH
DYD3_k127_858279_3	1201288.M900_1553	2.829e-257	808.0	COG1166@1|root,COG1166@2|Bacteria,1MU80@1224|Proteobacteria,42M2B@68525|delta/epsilon subdivisions,2MSTI@213481|Bdellovibrionales,2WJDZ@28221|Deltaproteobacteria	213481|Bdellovibrionales	H	Catalyzes the biosynthesis of agmatine from arginine	speA	-	4.1.1.19	ko:K01585	ko00330,ko01100,map00330,map01100	M00133	R00566	RC00299	ko00000,ko00001,ko00002,ko01000	-	-	-	Orn_Arg_deC_N
DYD3_k127_858279_33	862908.BMS_1467	2.184e-24	107.0	COG0664@1|root,COG0664@2|Bacteria	2|Bacteria	T	cyclic nucleotide binding	-	-	-	ko:K10914	ko02020,ko02024,ko02025,ko02026,ko05111,map02020,map02024,map02025,map02026,map05111	-	-	-	ko00000,ko00001,ko03000	-	-	-	HATPase_c,HTH_Crp_2,HisKA,cNMP_binding
DYD3_k127_858279_7	1201288.M900_A0116	3.861e-160	516.0	COG0826@1|root,COG0826@2|Bacteria,1MUQG@1224|Proteobacteria,42M8P@68525|delta/epsilon subdivisions,2MTV1@213481|Bdellovibrionales,2WJZR@28221|Deltaproteobacteria	213481|Bdellovibrionales	O	PFAM peptidase U32	-	-	-	ko:K08303	ko05120,map05120	-	-	-	ko00000,ko00001,ko01000,ko01002	-	-	-	Peptidase_U32,Peptidase_U32_C
DYD3_k127_858279_19	862908.BMS_1470	2.325e-87	302.0	COG0826@1|root,COG0826@2|Bacteria	2|Bacteria	O	peptidase U32	-	-	-	ko:K08303	ko05120,map05120	-	-	-	ko00000,ko00001,ko01000,ko01002	-	-	-	Peptidase_U32
DYD3_k127_858279_29	264462.Bd2362	5.348e-48	186.0	COG0116@1|root,COG0116@2|Bacteria,1MUQM@1224|Proteobacteria,42M2V@68525|delta/epsilon subdivisions,2MT3H@213481|Bdellovibrionales,2WKEB@28221|Deltaproteobacteria	213481|Bdellovibrionales	L	RNA methylase	-	-	-	ko:K07444	-	-	-	-	ko00000,ko01000	-	-	-	THUMP,UPF0020
DYD3_k127_858279_22	1353529.M899_1604	2.724e-69	241.0	COG0313@1|root,COG0313@2|Bacteria,1MU0E@1224|Proteobacteria,42P3I@68525|delta/epsilon subdivisions,2MT8N@213481|Bdellovibrionales,2WM37@28221|Deltaproteobacteria	213481|Bdellovibrionales	H	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA	-	-	2.1.1.198	ko:K07056	-	-	-	-	ko00000,ko01000,ko03009	-	-	-	TP_methylase
DYD3_k127_858279_14	760192.Halhy_4186	7.255e-100	336.0	COG1304@1|root,COG1304@2|Bacteria,4NJPE@976|Bacteroidetes,1IYN1@117747|Sphingobacteriia	976|Bacteroidetes	C	COG1304 L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid	-	-	5.3.3.2	ko:K01823	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	M00095,M00096,M00364,M00365,M00366,M00367	R01123	RC00455	ko00000,ko00001,ko00002,ko01000	-	-	-	FMN_dh
DYD3_k127_858279_6	880071.Fleli_3761	2.461e-166	533.0	COG1257@1|root,COG1257@2|Bacteria,4NGNG@976|Bacteroidetes,47UAH@768503|Cytophagia	976|Bacteroidetes	I	Hydroxymethylglutaryl-coenzyme A reductase	mvaA	-	1.1.1.88	ko:K00054	ko00900,ko01110,ko01130,map00900,map01110,map01130	-	R02081	RC00004,RC00644	ko00000,ko00001,ko01000	-	-	-	HMG-CoA_red
DYD3_k127_858279_13	1353529.M899_1607	4.478e-111	366.0	COG1577@1|root,COG1577@2|Bacteria	2|Bacteria	I	mevalonate kinase activity	mvaK2	-	2.7.1.36,2.7.4.2	ko:K00869,ko:K00938	ko00900,ko01100,ko01110,ko01130,ko04146,map00900,map01100,map01110,map01130,map04146	M00095	R02245,R03245	RC00002,RC00017	ko00000,ko00001,ko00002,ko01000	-	-	-	GHMP_kinases_C,GHMP_kinases_N
DYD3_k127_858279_17	1122179.KB890491_gene4377	1.73e-88	303.0	COG3407@1|root,COG3407@2|Bacteria,4NDYX@976|Bacteroidetes	976|Bacteroidetes	I	diphosphomevalonate decarboxylase	mvaD	-	4.1.1.33	ko:K01597	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	M00095	R01121	RC00453	ko00000,ko00001,ko00002,ko01000	-	-	-	-
DYD3_k127_858279_24	862908.BMS_1480	9.402e-60	216.0	COG1577@1|root,COG1577@2|Bacteria	2|Bacteria	I	mevalonate kinase activity	mvk	-	1.1.1.88,2.3.3.10,2.7.1.36	ko:K00054,ko:K00869,ko:K01641	ko00072,ko00280,ko00650,ko00900,ko01100,ko01110,ko01130,ko04146,map00072,map00280,map00650,map00900,map01100,map01110,map01130,map04146	M00088,M00095	R01978,R02081,R02245	RC00002,RC00004,RC00017,RC00503,RC00644	ko00000,ko00001,ko00002,ko01000	-	-	-	GHMP_kinases_C,GHMP_kinases_N
DYD3_k127_858279_21	1122165.AUHS01000019_gene1551	1.027e-69	251.0	COG3387@1|root,COG3387@2|Bacteria,1R65A@1224|Proteobacteria,1SI3I@1236|Gammaproteobacteria,1JCJ0@118969|Legionellales	118969|Legionellales	G	Glycosyl hydrolases family 15	-	-	3.2.1.3	ko:K01178	ko00500,ko01100,map00500,map01100	-	R01790,R01791,R06199	-	ko00000,ko00001,ko01000	-	GH15	-	Glyco_hydro_15
DYD3_k127_858279_30	862908.BMS_1481	1.408e-45	176.0	COG1024@1|root,COG1024@2|Bacteria	2|Bacteria	I	Enoyl-CoA hydratase	-	-	3.7.1.18	ko:K20765	-	-	-	-	ko00000,ko01000	-	-	-	ECH_1
DYD3_k127_858279_15	264462.Bd0660	7.837e-95	322.0	2BI6Q@1|root,32CBY@2|Bacteria,1MYDT@1224|Proteobacteria,42T3X@68525|delta/epsilon subdivisions,2MTZ4@213481|Bdellovibrionales,2WPSM@28221|Deltaproteobacteria	213481|Bdellovibrionales	S	Protein of unknown function (DUF2914)	-	-	-	-	-	-	-	-	-	-	-	-	DUF2914
DYD3_k127_858279_8	862908.BMS_1486	4.536e-151	482.0	COG0492@1|root,COG0492@2|Bacteria,1MV15@1224|Proteobacteria,42MHR@68525|delta/epsilon subdivisions,2MSV0@213481|Bdellovibrionales,2WIY8@28221|Deltaproteobacteria	213481|Bdellovibrionales	C	Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family	trxB	-	1.8.1.9	ko:K00384	ko00450,map00450	-	R02016,R03596,R09372	RC00013,RC02518,RC02873	ko00000,ko00001,ko01000	-	-	-	Pyr_redox_2,Thioredoxin
DYD3_k127_858279_27	862908.BMS_1489	2.224e-51	196.0	COG3637@1|root,COG3637@2|Bacteria	2|Bacteria	M	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety	msp3	-	-	-	-	-	-	-	-	-	-	-	DUF3138,MtrB_PioB,OMP_b-brl,Surface_Ag_2,fn3
DYD3_k127_858279_11	862908.BMS_1490	9.323e-125	413.0	COG0578@1|root,COG0578@2|Bacteria,1MUMY@1224|Proteobacteria,42N1B@68525|delta/epsilon subdivisions,2MSWP@213481|Bdellovibrionales,2WJWS@28221|Deltaproteobacteria	213481|Bdellovibrionales	C	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family	glpD	-	1.1.5.3	ko:K00111	ko00564,ko01110,map00564,map01110	-	R00848	RC00029	ko00000,ko00001,ko01000	-	-	-	DAO,DAO_C
DYD3_k127_858279_28	862908.BMS_1491	2.643e-49	190.0	COG0393@1|root,COG0393@2|Bacteria	2|Bacteria	S	Putative heavy-metal-binding	-	-	2.7.11.1	ko:K12132	-	-	-	-	ko00000,ko01000,ko01001	-	-	-	YbjQ_1
DYD3_k127_858279_0	1201288.M900_1036	0.0	1160.0	COG0653@1|root,COG0653@2|Bacteria,1MUJZ@1224|Proteobacteria,42MMV@68525|delta/epsilon subdivisions,2MSQN@213481|Bdellovibrionales,2WIZ4@28221|Deltaproteobacteria	213481|Bdellovibrionales	U	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane	secA	GO:0000166,GO:0003674,GO:0003824,GO:0005215,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005887,GO:0006810,GO:0008104,GO:0008144,GO:0008150,GO:0008320,GO:0008565,GO:0015031,GO:0015399,GO:0015405,GO:0015440,GO:0015450,GO:0015462,GO:0015833,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0022804,GO:0022857,GO:0022884,GO:0030554,GO:0031224,GO:0031226,GO:0031522,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0033036,GO:0033220,GO:0035639,GO:0036094,GO:0042623,GO:0042626,GO:0042886,GO:0042887,GO:0043167,GO:0043168,GO:0043492,GO:0043952,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0045184,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071806,GO:0071944,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:1904680	-	ko:K03070	ko02024,ko03060,ko03070,map02024,map03060,map03070	M00335	-	-	ko00000,ko00001,ko00002,ko02044	3.A.5.1,3.A.5.10,3.A.5.2,3.A.5.4	-	-	Helicase_C,SEC-C,SecA_DEAD,SecA_PP_bind,SecA_SW
DYD3_k127_858279_10	862908.BMS_1493	3.201e-135	439.0	COG0739@1|root,COG0739@2|Bacteria,1MVTF@1224|Proteobacteria,42P5W@68525|delta/epsilon subdivisions,2MT13@213481|Bdellovibrionales,2WMA6@28221|Deltaproteobacteria	213481|Bdellovibrionales	M	PFAM peptidase	-	-	-	-	-	-	-	-	-	-	-	-	Peptidase_M23
DYD3_k127_858279_18	862908.BMS_1499	3.404e-88	297.0	COG0631@1|root,COG0631@2|Bacteria,1R7UF@1224|Proteobacteria,42QUA@68525|delta/epsilon subdivisions,2MT03@213481|Bdellovibrionales,2WP2A@28221|Deltaproteobacteria	213481|Bdellovibrionales	T	protein phosphatase 2C domain protein	-	-	3.1.3.16	ko:K01090,ko:K20074	-	-	-	-	ko00000,ko01000,ko01009	-	-	-	PP2C,PP2C_2
DYD3_k127_858279_1	1201288.M900_1039	0.0	1147.0	COG2766@1|root,COG2766@2|Bacteria,1MVW7@1224|Proteobacteria,42NBQ@68525|delta/epsilon subdivisions,2MSVA@213481|Bdellovibrionales,2WKR5@28221|Deltaproteobacteria	213481|Bdellovibrionales	T	Serine protein kinase	prkA	-	-	ko:K07180	-	-	-	-	ko00000	-	-	-	AAA_PrkA,PrkA
DYD3_k127_858279_5	1353529.M899_1925	5.253e-194	609.0	COG2718@1|root,COG2718@2|Bacteria,1MWQM@1224|Proteobacteria,42PDK@68525|delta/epsilon subdivisions,2MSPM@213481|Bdellovibrionales,2WJKJ@28221|Deltaproteobacteria	213481|Bdellovibrionales	S	Belongs to the UPF0229 family	-	-	-	ko:K09786	-	-	-	-	ko00000	-	-	-	DUF444
DYD3_k127_858279_4	862908.BMS_1502	1.134e-221	696.0	COG2719@1|root,COG2719@2|Bacteria,1MW6U@1224|Proteobacteria,42MYY@68525|delta/epsilon subdivisions,2MSUJ@213481|Bdellovibrionales,2WJ6V@28221|Deltaproteobacteria	213481|Bdellovibrionales	S	PFAM SpoVR family protein	spoVR	-	-	ko:K06415	-	-	-	-	ko00000	-	-	-	SpoVR
DYD3_k127_858279_16	765869.BDW_04005	3.947e-90	316.0	COG0840@1|root,COG0840@2|Bacteria,1MU9B@1224|Proteobacteria,42M22@68525|delta/epsilon subdivisions,2WM8F@28221|Deltaproteobacteria	28221|Deltaproteobacteria	NT	Chemotaxis sensory transducer	mcp64H-1	-	-	ko:K03406	ko02020,ko02030,map02020,map02030	-	-	-	ko00000,ko00001,ko02035	-	-	-	4HB_MCP_1,HAMP,MCPsignal,PAS_4,dCache_1
DYD3_k127_858279_40	1121904.ARBP01000007_gene2981	2.641e-18	94.0	COG2267@1|root,COG2267@2|Bacteria	2|Bacteria	I	carboxylic ester hydrolase activity	-	-	3.1.1.1	ko:K03928	-	-	-	-	ko00000,ko01000	-	-	-	Abhydrolase_6,Hydrolase_4
DYD3_k127_858279_12	862908.BMS_1506	3.673e-115	381.0	COG0568@1|root,COG0568@2|Bacteria,1MVWR@1224|Proteobacteria,42NRM@68525|delta/epsilon subdivisions,2MSY1@213481|Bdellovibrionales,2WJ0S@28221|Deltaproteobacteria	213481|Bdellovibrionales	K	Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released	rpoH	-	-	ko:K03086,ko:K03089	-	-	-	-	ko00000,ko03021	-	-	-	Sigma70_r1_2,Sigma70_r2,Sigma70_r3,Sigma70_r4
DYD3_k127_858279_32	158189.SpiBuddy_1391	4.622e-26	109.0	COG0184@1|root,COG0184@2|Bacteria,2J91K@203691|Spirochaetes	203691|Spirochaetes	J	Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome	rpsO	-	-	ko:K02956	ko03010,map03010	M00178,M00179	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_S15
DYD3_k127_858279_2	1201288.M900_1047	2.551e-274	860.0	COG1185@1|root,COG1185@2|Bacteria,1MVB9@1224|Proteobacteria,42MTZ@68525|delta/epsilon subdivisions,2MSN5@213481|Bdellovibrionales,2WJCE@28221|Deltaproteobacteria	213481|Bdellovibrionales	J	Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction	pnp	GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003824,GO:0004654,GO:0005488,GO:0006139,GO:0006401,GO:0006402,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009892,GO:0009987,GO:0010468,GO:0010605,GO:0010629,GO:0016070,GO:0016071,GO:0016740,GO:0016772,GO:0016779,GO:0019222,GO:0019439,GO:0034641,GO:0034655,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0046483,GO:0046700,GO:0048519,GO:0050789,GO:0060255,GO:0065007,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901361,GO:1901363,GO:1901575	2.7.7.8	ko:K00962	ko00230,ko00240,ko03018,map00230,map00240,map03018	M00394	R00437,R00438,R00439,R00440	RC02795	ko00000,ko00001,ko00002,ko01000,ko03016,ko03019	-	-	-	KH_1,PNPase,RNase_PH,RNase_PH_C,S1
DYD3_k127_858279_23	1201290.M902_2938	9.016e-63	218.0	COG0756@1|root,COG0756@2|Bacteria,1RA7P@1224|Proteobacteria,42SJS@68525|delta/epsilon subdivisions,2MSZI@213481|Bdellovibrionales,2WP7N@28221|Deltaproteobacteria	213481|Bdellovibrionales	F	This enzyme is involved in nucleotide metabolism it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA	dut	GO:0000287,GO:0003674,GO:0003824,GO:0004170,GO:0005488,GO:0006139,GO:0006220,GO:0006221,GO:0006226,GO:0006244,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009129,GO:0009130,GO:0009141,GO:0009143,GO:0009147,GO:0009149,GO:0009157,GO:0009162,GO:0009165,GO:0009166,GO:0009176,GO:0009177,GO:0009200,GO:0009204,GO:0009211,GO:0009213,GO:0009219,GO:0009221,GO:0009223,GO:0009262,GO:0009263,GO:0009264,GO:0009265,GO:0009394,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0019692,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0046078,GO:0046080,GO:0046081,GO:0046385,GO:0046386,GO:0046434,GO:0046483,GO:0046700,GO:0046872,GO:0047429,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0072529,GO:0090407,GO:1901135,GO:1901136,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576	3.6.1.23	ko:K01520	ko00240,ko00983,ko01100,map00240,map00983,map01100	M00053	R02100,R11896	RC00002	ko00000,ko00001,ko00002,ko01000,ko03400	-	-	-	dUTPase
DYD3_k127_858279_31	862908.BMS_1511	5.326e-38	149.0	COG0633@1|root,COG0633@2|Bacteria,1NJZK@1224|Proteobacteria,42XW4@68525|delta/epsilon subdivisions,2MTFG@213481|Bdellovibrionales,2WT8P@28221|Deltaproteobacteria	213481|Bdellovibrionales	C	2Fe-2S iron-sulfur cluster binding domain	-	-	-	ko:K04755	-	-	-	-	ko00000	-	-	-	Fer2
DYD3_k127_858279_9	1254432.SCE1572_14985	2.915e-145	473.0	COG3104@1|root,COG3104@2|Bacteria,1MW6W@1224|Proteobacteria,42NNY@68525|delta/epsilon subdivisions,2WKK6@28221|Deltaproteobacteria,2YTTN@29|Myxococcales	28221|Deltaproteobacteria	E	POT family	-	-	-	ko:K03305	-	-	-	-	ko00000	2.A.17	-	-	PTR2
DYD3_k127_858279_36	1201288.M900_2613	3.689e-22	111.0	COG2931@1|root,COG2931@2|Bacteria,1MU7T@1224|Proteobacteria	1224|Proteobacteria	Q	COG2931, RTX toxins and related Ca2 -binding proteins	-	-	-	-	-	-	-	-	-	-	-	-	HemolysinCabind,Peptidase_M10_C
DYD3_k127_868442_0	1220534.B655_0273	0.0	1159.0	COG3119@1|root,arCOG02791@2157|Archaea,2Y8G8@28890|Euryarchaeota	28890|Euryarchaeota	P	Sulfatase	-	-	3.1.6.1	ko:K01130	ko00140,ko00600,map00140,map00600	-	R03980,R04856	RC00128,RC00231	ko00000,ko00001,ko01000	-	-	-	Sulfatase
DYD3_k127_868442_3	1532557.JL37_01315	1.104e-18	93.0	2E9FY@1|root,333P7@2|Bacteria,1N8S6@1224|Proteobacteria,2VWAN@28216|Betaproteobacteria,3T7BM@506|Alcaligenaceae	28216|Betaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_868442_1	765869.BDW_07780	3.211e-159	511.0	COG0075@1|root,COG0075@2|Bacteria,1MWHJ@1224|Proteobacteria,42MBH@68525|delta/epsilon subdivisions,2WK79@28221|Deltaproteobacteria	28221|Deltaproteobacteria	E	Aminotransferase	-	-	2.6.1.44,2.6.1.45,2.6.1.51	ko:K00830	ko00250,ko00260,ko00630,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko04146,map00250,map00260,map00630,map00680,map01100,map01110,map01120,map01130,map01200,map04146	M00346,M00532	R00369,R00372,R00585,R00588	RC00006,RC00008,RC00018	ko00000,ko00001,ko00002,ko01000,ko01007	-	-	-	Aminotran_5
DYD3_k127_868442_2	1242864.D187_000384	4.068e-29	121.0	COG3631@1|root,COG3631@2|Bacteria,1NGQ1@1224|Proteobacteria	1224|Proteobacteria	S	SnoaL-like polyketide cyclase	-	-	-	-	-	-	-	-	-	-	-	-	SnoaL,SnoaL_2
DYD3_k127_87687_2	1434325.AZQN01000004_gene1682	2.071e-07	58.0	2C8RN@1|root,32RMQ@2|Bacteria,4NSD0@976|Bacteroidetes,47RVK@768503|Cytophagia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_87687_1	765869.BDW_11210	2.67e-56	214.0	COG1538@1|root,COG1538@2|Bacteria,1PZ5P@1224|Proteobacteria,43EAD@68525|delta/epsilon subdivisions,2MTP2@213481|Bdellovibrionales,2X05F@28221|Deltaproteobacteria	213481|Bdellovibrionales	MU	Outer membrane efflux protein	-	-	-	-	-	-	-	-	-	-	-	-	OEP
DYD3_k127_87687_0	264462.Bd3058	3.408e-124	410.0	COG0841@1|root,COG0841@2|Bacteria,1MU48@1224|Proteobacteria,42MF6@68525|delta/epsilon subdivisions,2MTNI@213481|Bdellovibrionales,2WJ8D@28221|Deltaproteobacteria	213481|Bdellovibrionales	V	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family	-	-	-	ko:K03296	-	-	-	-	ko00000	2.A.6.2	-	-	ACR_tran
DYD3_k127_882366_4	867900.Celly_0551	1.33e-12	73.0	COG0584@1|root,COG0584@2|Bacteria,4NGI1@976|Bacteroidetes,1I0PI@117743|Flavobacteriia	976|Bacteroidetes	C	glycerophosphoryl diester phosphodiesterase	glpQ	-	3.1.4.46	ko:K01126	ko00564,map00564	-	R01030,R01470	RC00017,RC00425	ko00000,ko00001,ko01000	-	-	-	GDPD,Phytase-like
DYD3_k127_882366_5	1117647.M5M_01360	1.424e-07	58.0	28MWZ@1|root,2ZB46@2|Bacteria,1R7K6@1224|Proteobacteria,1SQ6M@1236|Gammaproteobacteria	1236|Gammaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_882366_1	264462.Bd0456	6.925e-34	134.0	COG0346@1|root,COG0346@2|Bacteria,1RD0N@1224|Proteobacteria,42ZH2@68525|delta/epsilon subdivisions,2WV36@28221|Deltaproteobacteria	28221|Deltaproteobacteria	E	Glyoxalase-like domain	-	-	4.4.1.5	ko:K01759	ko00620,map00620	-	R02530	RC00004,RC00740	ko00000,ko00001,ko01000	-	-	-	Glyoxalase
DYD3_k127_882366_2	1536775.H70737_15335	1.16e-31	134.0	COG0454@1|root,COG0456@2|Bacteria,1TYX1@1239|Firmicutes,4IRK4@91061|Bacilli,276U1@186822|Paenibacillaceae	91061|Bacilli	K	Acetyltransferase (GNAT) family	-	-	-	-	-	-	-	-	-	-	-	-	Acetyltransf_1
DYD3_k127_882366_3	109760.SPPG_03366T0	1.644e-30	135.0	2C5PI@1|root,2S2YG@2759|Eukaryota	2759|Eukaryota	S	Transglutaminase elicitor	-	-	-	-	-	-	-	-	-	-	-	-	TGase_elicitor
DYD3_k127_882366_0	1201290.M902_2420	1.395e-40	163.0	COG0642@1|root,COG2205@2|Bacteria,1NXJA@1224|Proteobacteria,430WA@68525|delta/epsilon subdivisions,2MU1V@213481|Bdellovibrionales,2WVT5@28221|Deltaproteobacteria	213481|Bdellovibrionales	T	Histidine kinase-like ATPases	-	-	-	-	-	-	-	-	-	-	-	-	HATPase_c
DYD3_k127_893096_5	862908.BMS_0545	2.867e-44	164.0	2E6J8@1|root,3316B@2|Bacteria,1N7GY@1224|Proteobacteria,42V6W@68525|delta/epsilon subdivisions,2MU5V@213481|Bdellovibrionales,2WRHG@28221|Deltaproteobacteria	213481|Bdellovibrionales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_893096_0	862908.BMS_0546	8.164e-210	669.0	COG0322@1|root,COG0322@2|Bacteria,1MV38@1224|Proteobacteria,42MB1@68525|delta/epsilon subdivisions,2MSRU@213481|Bdellovibrionales,2WJ76@28221|Deltaproteobacteria	213481|Bdellovibrionales	L	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision	uvrC	GO:0005575,GO:0005622,GO:0005623,GO:0006950,GO:0006974,GO:0008150,GO:0009380,GO:0009987,GO:0032991,GO:0033554,GO:0044424,GO:0044464,GO:0050896,GO:0051716,GO:1902494,GO:1905347,GO:1905348,GO:1990391	-	ko:K03703	ko03420,map03420	-	-	-	ko00000,ko00001,ko03400	-	-	-	GIY-YIG,HHH_2,HHH_5,UVR,UvrC_HhH_N
DYD3_k127_893096_7	1353529.M899_2999	7.288e-22	106.0	COG1573@1|root,COG1573@2|Bacteria	2|Bacteria	L	deaminated base DNA N-glycosylase activity	-	-	3.2.2.27	ko:K21929	ko03410,map03410	-	-	-	ko00000,ko00001,ko01000,ko03400	-	-	-	UDG
DYD3_k127_893096_2	862908.BMS_0549	5.576e-93	318.0	COG2385@1|root,COG2385@2|Bacteria,1RGJS@1224|Proteobacteria,42RZE@68525|delta/epsilon subdivisions,2WNH8@28221|Deltaproteobacteria	28221|Deltaproteobacteria	D	Stage II sporulation D domain protein	-	-	-	ko:K06381	-	-	-	-	ko00000	-	-	-	SpoIID
DYD3_k127_893096_3	1353529.M899_1673	4.151e-64	228.0	COG0860@1|root,COG0860@2|Bacteria,1MUQK@1224|Proteobacteria,42MPH@68525|delta/epsilon subdivisions,2MT8Y@213481|Bdellovibrionales,2WJHW@28221|Deltaproteobacteria	213481|Bdellovibrionales	M	PFAM cell wall hydrolase autolysin	-	-	3.5.1.28	ko:K01448	ko01503,map01503	M00727	R04112	RC00064,RC00141	ko00000,ko00001,ko00002,ko01000,ko01011,ko03036	-	-	-	Amidase_3
DYD3_k127_893096_1	862908.BMS_0553	1.381e-93	313.0	COG1651@1|root,COG1651@2|Bacteria,1NZPQ@1224|Proteobacteria,42U1T@68525|delta/epsilon subdivisions,2MSXR@213481|Bdellovibrionales,2WQH9@28221|Deltaproteobacteria	213481|Bdellovibrionales	O	PFAM DSBA oxidoreductase	-	-	-	-	-	-	-	-	-	-	-	-	Thioredoxin_4
DYD3_k127_894199_16	383372.Rcas_0812	6.722e-19	98.0	COG1449@1|root,COG1449@2|Bacteria,2G5XB@200795|Chloroflexi,3768X@32061|Chloroflexia	32061|Chloroflexia	G	Belongs to the glycosyl hydrolase 57 family	-	-	-	-	-	-	-	-	-	-	-	-	DUF3536,Glyco_hydro_57
DYD3_k127_894199_13	765869.BDW_09825	6.344e-49	188.0	COG3191@1|root,COG3191@2|Bacteria,1QY2H@1224|Proteobacteria,43C9T@68525|delta/epsilon subdivisions,2MUT9@213481|Bdellovibrionales,2X7KA@28221|Deltaproteobacteria	213481|Bdellovibrionales	EQ	EF hand	-	-	-	-	-	-	-	-	-	-	-	-	EF-hand_5
DYD3_k127_894199_19	4432.XP_010243732.1	1.65e-06	57.0	2AUR4@1|root,2RZUN@2759|Eukaryota,37UR6@33090|Viridiplantae,3GIQV@35493|Streptophyta	35493|Streptophyta	S	domain-containing protein	-	GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044464,GO:0097159,GO:1901363	-	-	-	-	-	-	-	-	-	-	FHA
DYD3_k127_894199_15	1353529.M899_2222	2.327e-36	143.0	COG1959@1|root,COG1959@2|Bacteria,1Q5R2@1224|Proteobacteria,43DPC@68525|delta/epsilon subdivisions,2MT8V@213481|Bdellovibrionales,2WTCS@28221|Deltaproteobacteria	213481|Bdellovibrionales	K	Transcriptional regulator	-	-	-	-	-	-	-	-	-	-	-	-	Rrf2
DYD3_k127_894199_0	1353529.M899_2223	3.955e-260	806.0	COG0719@1|root,COG0719@2|Bacteria,1MVKY@1224|Proteobacteria,42NJ3@68525|delta/epsilon subdivisions,2MSSW@213481|Bdellovibrionales,2WM3R@28221|Deltaproteobacteria	213481|Bdellovibrionales	O	Uncharacterized protein family (UPF0051)	sufB	-	-	ko:K09014	-	-	-	-	ko00000	-	-	-	UPF0051
DYD3_k127_894199_5	862908.BMS_1242	4.481e-122	395.0	COG0396@1|root,COG0396@2|Bacteria,1MUGK@1224|Proteobacteria,42PD0@68525|delta/epsilon subdivisions,2MSTR@213481|Bdellovibrionales,2WJV3@28221|Deltaproteobacteria	213481|Bdellovibrionales	O	FeS assembly ATPase SufC	sufC	-	-	ko:K09013	-	-	-	-	ko00000,ko02000	-	-	-	ABC_tran
DYD3_k127_894199_11	1353529.M899_2226	8.822e-61	225.0	COG0719@1|root,COG0719@2|Bacteria,1MVK0@1224|Proteobacteria,42QXC@68525|delta/epsilon subdivisions,2MT2F@213481|Bdellovibrionales,2WN3M@28221|Deltaproteobacteria	213481|Bdellovibrionales	O	FeS assembly protein SufD	sufD	-	-	ko:K09015	-	-	-	-	ko00000	-	-	-	UPF0051
DYD3_k127_894199_3	862908.BMS_1240	1.596e-152	492.0	COG0520@1|root,COG0520@2|Bacteria,1MUPD@1224|Proteobacteria,42PJT@68525|delta/epsilon subdivisions,2MSTW@213481|Bdellovibrionales,2WKPW@28221|Deltaproteobacteria	213481|Bdellovibrionales	E	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine	sufS	-	2.8.1.7,4.4.1.16	ko:K11717	ko00450,ko01100,map00450,map01100	-	R03599,R11528	RC00961,RC01789,RC02313	ko00000,ko00001,ko01000	-	-	-	Aminotran_5
DYD3_k127_894199_10	862908.BMS_1239	4.098e-75	256.0	COG0694@1|root,COG0694@2|Bacteria,1MVQ1@1224|Proteobacteria,437GR@68525|delta/epsilon subdivisions,2MT0B@213481|Bdellovibrionales,2WVF0@28221|Deltaproteobacteria	213481|Bdellovibrionales	O	Scaffold protein Nfu/NifU N terminal	-	-	-	-	-	-	-	-	-	-	-	-	Nfu_N,NifU
DYD3_k127_894199_18	1033744.CAEL01000004_gene800	9.462e-08	59.0	COG1716@1|root,COG1716@2|Bacteria,1VF0E@1239|Firmicutes,24PKU@186801|Clostridia	186801|Clostridia	T	FHA domain protein	-	-	-	-	-	-	-	-	-	-	-	-	FHA
DYD3_k127_894199_4	1201288.M900_1700	4.281e-133	430.0	COG0408@1|root,COG0408@2|Bacteria,1MWMF@1224|Proteobacteria,42Z0J@68525|delta/epsilon subdivisions,2X5CK@28221|Deltaproteobacteria	28221|Deltaproteobacteria	H	Coproporphyrinogen III oxidase	hemF	-	1.3.3.3	ko:K00228	ko00860,ko01100,ko01110,map00860,map01100,map01110	M00121	R03220	RC00884	ko00000,ko00001,ko00002,ko01000	-	-	-	Coprogen_oxidas
DYD3_k127_894199_2	862908.BMS_1225	2.532e-160	530.0	COG2114@1|root,COG4252@1|root,COG2114@2|Bacteria,COG4252@2|Bacteria,1MV1V@1224|Proteobacteria,42N5S@68525|delta/epsilon subdivisions,2MSM8@213481|Bdellovibrionales,2WIUS@28221|Deltaproteobacteria	213481|Bdellovibrionales	T	Adenylyl cyclase class-3 4 guanylyl cyclase	-	-	4.6.1.1	ko:K01768	ko00230,ko02025,ko04113,ko04213,map00230,map02025,map04113,map04213	M00695	R00089,R00434	RC00295	ko00000,ko00001,ko00002,ko01000	-	-	-	CHASE2,Guanylate_cyc
DYD3_k127_894199_9	272123.Anacy_4523	3.909e-89	316.0	COG3011@1|root,COG3011@2|Bacteria,1FZYP@1117|Cyanobacteria	1117|Cyanobacteria	S	HTTM domain protein	-	-	-	-	-	-	-	-	-	-	-	-	DUF393,VKG_Carbox
DYD3_k127_894199_1	862908.BMS_1430	1.159e-200	634.0	COG1233@1|root,COG1233@2|Bacteria,1MV2R@1224|Proteobacteria,42NXM@68525|delta/epsilon subdivisions,2WU8Z@28221|Deltaproteobacteria	28221|Deltaproteobacteria	Q	Flavin containing amine oxidoreductase	-	-	-	-	-	-	-	-	-	-	-	-	Amino_oxidase,FAD_binding_2
DYD3_k127_894199_7	1353529.M899_0294	7.844e-100	331.0	COG1028@1|root,COG1028@2|Bacteria,1MU6X@1224|Proteobacteria,42MB9@68525|delta/epsilon subdivisions,2MSYR@213481|Bdellovibrionales,2WJ64@28221|Deltaproteobacteria	213481|Bdellovibrionales	IQ	Short-chain dehydrogenase reductase SDR	-	-	1.1.1.100	ko:K00059	ko00061,ko00333,ko00780,ko01040,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01040,map01100,map01130,map01212	M00083,M00572	R04533,R04534,R04536,R04543,R04566,R04953,R04964,R07759,R07763,R10116,R10120,R11671	RC00029,RC00117	ko00000,ko00001,ko00002,ko01000,ko01004	-	-	-	adh_short_C2
DYD3_k127_894199_14	862908.BMS_1432	3.263e-42	158.0	COG0764@1|root,COG0764@2|Bacteria,1RH2T@1224|Proteobacteria,42SCN@68525|delta/epsilon subdivisions,2WP3E@28221|Deltaproteobacteria	28221|Deltaproteobacteria	I	Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs	fabZ	-	4.2.1.59	ko:K02372	ko00061,ko00780,ko01100,ko01212,map00061,map00780,map01100,map01212	M00083,M00572	R04428,R04535,R04537,R04544,R04568,R04954,R04965,R07764,R10117,R10121	RC00831,RC01095	ko00000,ko00001,ko00002,ko01000,ko01004	-	-	-	FabA
DYD3_k127_894199_8	1353529.M899_0292	9.372e-96	319.0	COG0623@1|root,COG0623@2|Bacteria,1NT6W@1224|Proteobacteria,42Z0N@68525|delta/epsilon subdivisions,2WTQ4@28221|Deltaproteobacteria	28221|Deltaproteobacteria	I	Enoyl-(Acyl carrier protein) reductase	-	-	1.3.1.10,1.3.1.9	ko:K00208	ko00061,ko00333,ko00780,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01100,map01130,map01212	M00083,M00572	R01404,R04429,R04430,R04724,R04725,R04955,R04956,R04958,R04959,R04961,R04962,R04966,R04967,R04969,R04970,R07765,R10118,R10122,R11671	RC00052,RC00076,RC00120	ko00000,ko00001,ko00002,ko01000,ko01004	-	-	-	adh_short_C2
DYD3_k127_894199_6	862908.BMS_1438	1.059e-100	338.0	COG0451@1|root,COG0451@2|Bacteria,1P603@1224|Proteobacteria,42NGH@68525|delta/epsilon subdivisions,2MT7W@213481|Bdellovibrionales,2WKS6@28221|Deltaproteobacteria	213481|Bdellovibrionales	M	3-Beta hydroxysteroid dehydrogenase isomerase	-	-	1.1.1.394,1.1.1.412	ko:K21271,ko:K22320	-	-	-	-	ko00000,ko01000	-	-	-	3Beta_HSD
DYD3_k127_894199_12	558884.JRGM01000145_gene2085	3.227e-49	189.0	COG2267@1|root,COG2267@2|Bacteria,1MWDA@1224|Proteobacteria,1RRJP@1236|Gammaproteobacteria,1Y4UG@135624|Aeromonadales	135624|Aeromonadales	I	Serine aminopeptidase, S33	-	-	3.1.1.5	ko:K01048	ko00564,map00564	-	-	-	ko00000,ko00001,ko01000	-	-	-	Hydrolase_4
DYD3_k127_901717_4	694427.Palpr_2665	1.633e-103	344.0	COG2216@1|root,COG2216@2|Bacteria,4NFBI@976|Bacteroidetes,2FND6@200643|Bacteroidia,22VUY@171551|Porphyromonadaceae	976|Bacteroidetes	P	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system	kdpB	-	3.6.3.12	ko:K01547	ko02020,map02020	-	-	-	ko00000,ko00001,ko01000	3.A.3.7	-	-	E1-E2_ATPase,Hydrolase
DYD3_k127_901717_1	742767.HMPREF9456_02767	1.228e-199	636.0	COG2060@1|root,COG2060@2|Bacteria,4NF2G@976|Bacteroidetes,2FP4S@200643|Bacteroidia,22WF2@171551|Porphyromonadaceae	976|Bacteroidetes	P	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds and transports the potassium across the cytoplasmic membrane	kdpA	GO:0003674,GO:0003824,GO:0005215,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006811,GO:0006812,GO:0006813,GO:0008150,GO:0008324,GO:0008556,GO:0009987,GO:0015075,GO:0015077,GO:0015079,GO:0015318,GO:0015399,GO:0015405,GO:0015662,GO:0015672,GO:0016020,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0030001,GO:0030955,GO:0031420,GO:0034220,GO:0042623,GO:0042625,GO:0042626,GO:0043167,GO:0043169,GO:0043492,GO:0044464,GO:0046872,GO:0046873,GO:0051179,GO:0051234,GO:0055085,GO:0071804,GO:0071805,GO:0071944,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0099131,GO:0099132	3.6.3.12	ko:K01546	ko02020,map02020	-	-	-	ko00000,ko00001,ko01000	3.A.3.7	-	-	KdpA
DYD3_k127_901717_6	1184267.A11Q_654	2.722e-76	268.0	2CB8G@1|root,2Z88H@2|Bacteria,1NTXY@1224|Proteobacteria	1224|Proteobacteria	S	Putative beta-barrel porin-2, OmpL-like. bbp2	-	-	-	-	-	-	-	-	-	-	-	-	BBP2
DYD3_k127_901717_19	1173263.Syn7502_02868	5.819e-15	81.0	COG2062@1|root,COG2062@2|Bacteria,1G6QD@1117|Cyanobacteria,1H1C1@1129|Synechococcus	1117|Cyanobacteria	T	Phosphohistidine phosphatase, SixA	sixA	-	-	ko:K08296	-	-	-	-	ko00000,ko01000	-	-	-	His_Phos_1
DYD3_k127_901717_10	5346.XP_001833036.1	4.079e-58	214.0	COG0010@1|root,KOG2965@2759|Eukaryota,38CCH@33154|Opisthokonta,3NU9J@4751|Fungi,3UZ31@5204|Basidiomycota,2271H@155619|Agaricomycetes,3W4RB@5338|Agaricales	4751|Fungi	E	Belongs to the arginase family	CAR1	GO:0000050,GO:0003674,GO:0003824,GO:0004053,GO:0004857,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005829,GO:0005937,GO:0006082,GO:0006520,GO:0006521,GO:0006525,GO:0006527,GO:0006560,GO:0006591,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0009056,GO:0009058,GO:0009063,GO:0009064,GO:0009065,GO:0009987,GO:0010121,GO:0010565,GO:0016054,GO:0016787,GO:0016810,GO:0016813,GO:0019222,GO:0019493,GO:0019547,GO:0019627,GO:0019752,GO:0030145,GO:0030234,GO:0030427,GO:0031323,GO:0033238,GO:0034641,GO:0042995,GO:0043086,GO:0043167,GO:0043169,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043332,GO:0043436,GO:0043603,GO:0043604,GO:0044092,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044271,GO:0044281,GO:0044282,GO:0044424,GO:0044444,GO:0044463,GO:0044464,GO:0046395,GO:0046483,GO:0046872,GO:0046914,GO:0050789,GO:0050790,GO:0050794,GO:0051171,GO:0051286,GO:0062012,GO:0065007,GO:0065009,GO:0071704,GO:0071941,GO:0080090,GO:0090368,GO:0090369,GO:0098772,GO:0120025,GO:0120038,GO:1901360,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576,GO:1901605,GO:1901606	3.5.3.1	ko:K01476	ko00220,ko00330,ko01100,ko01110,ko01130,ko01230,ko05146,map00220,map00330,map01100,map01110,map01130,map01230,map05146	M00029,M00134	R00551	RC00024,RC00329	ko00000,ko00001,ko00002,ko01000	-	-	iMM904.YPL111W,iND750.YPL111W	Arginase
DYD3_k127_901717_17	522772.Dacet_2969	1.143e-30	130.0	COG0204@1|root,COG0204@2|Bacteria,2GGEH@200930|Deferribacteres	200930|Deferribacteres	I	Phosphate acyltransferases	-	-	2.3.1.51	ko:K00655	ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110	M00089	R02241,R09381	RC00004,RC00037,RC00039	ko00000,ko00001,ko00002,ko01000,ko01004	-	-	-	Acyltransferase
DYD3_k127_901717_13	264462.Bd0347	4.474e-42	165.0	COG3176@1|root,COG3176@2|Bacteria,1MWIM@1224|Proteobacteria,42Y26@68525|delta/epsilon subdivisions,2MT11@213481|Bdellovibrionales,2WTF6@28221|Deltaproteobacteria	213481|Bdellovibrionales	I	Acetyltransferase (GNAT) domain	-	-	-	-	-	-	-	-	-	-	-	-	Acetyltransf_5
DYD3_k127_901717_8	264462.Bd2170	1.316e-66	240.0	COG1253@1|root,COG1253@2|Bacteria,1MV3P@1224|Proteobacteria,42N97@68525|delta/epsilon subdivisions,2MTTG@213481|Bdellovibrionales,2WKVE@28221|Deltaproteobacteria	213481|Bdellovibrionales	S	CBS domain containing protein	-	-	-	ko:K03699	-	-	-	-	ko00000,ko02042	-	-	-	CBS,CorC_HlyC,DUF21
DYD3_k127_901717_14	236097.ADG881_1307	1.886e-36	148.0	COG1409@1|root,COG1409@2|Bacteria,1NXRI@1224|Proteobacteria,1S1N6@1236|Gammaproteobacteria	1236|Gammaproteobacteria	N	Acid phosphatase	-	-	3.1.3.2	ko:K14379	ko00740,ko01100,ko04142,ko04380,ko05323,map00740,map01100,map04142,map04380,map05323	-	R00548	RC00017	ko00000,ko00001,ko01000	-	-	-	Metallophos
DYD3_k127_901717_2	1159870.KB907784_gene2728	3.507e-131	426.0	COG0604@1|root,COG0604@2|Bacteria,1MWBD@1224|Proteobacteria,2VH3Z@28216|Betaproteobacteria,3T1H4@506|Alcaligenaceae	28216|Betaproteobacteria	C	NADPH quinone reductase and related Zn-dependent oxidoreductases	qor	-	1.6.5.5	ko:K00344	-	-	-	-	ko00000,ko01000	-	-	-	ADH_N,ADH_zinc_N
DYD3_k127_901717_5	583345.Mmol_0415	1.104e-96	323.0	COG3384@1|root,COG3384@2|Bacteria,1MXJZ@1224|Proteobacteria,2VKHF@28216|Betaproteobacteria,2KP6B@206350|Nitrosomonadales	206350|Nitrosomonadales	S	Catalytic LigB subunit of aromatic ring-opening dioxygenase	-	-	-	-	-	-	-	-	-	-	-	-	LigB
DYD3_k127_901717_15	1424334.W822_05620	1.053e-34	142.0	29FE7@1|root,302BX@2|Bacteria,1NXED@1224|Proteobacteria,2W8VK@28216|Betaproteobacteria,3T7DI@506|Alcaligenaceae	28216|Betaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_901717_21	1206744.BAGL01000127_gene7133	4.619e-07	61.0	COG1403@1|root,COG2310@1|root,COG1403@2|Bacteria,COG2310@2|Bacteria,2GV0W@201174|Actinobacteria,4FX36@85025|Nocardiaceae	201174|Actinobacteria	TV	Protein of unknown function (DUF2510)	-	-	-	-	-	-	-	-	-	-	-	-	DUF2510,HNH,HNH_5,TerD
DYD3_k127_901717_16	264462.Bd3471	6.636e-31	127.0	COG0835@1|root,COG0835@2|Bacteria,1RAH1@1224|Proteobacteria,42TN2@68525|delta/epsilon subdivisions,2MUNU@213481|Bdellovibrionales,2WR0G@28221|Deltaproteobacteria	213481|Bdellovibrionales	NT	Two component signalling adaptor domain	-	-	-	ko:K03408	ko02020,ko02030,map02020,map02030	-	-	-	ko00000,ko00001,ko02035	-	-	-	CheW
DYD3_k127_901717_3	765869.BDW_04005	7.593e-112	380.0	COG0840@1|root,COG0840@2|Bacteria,1MU9B@1224|Proteobacteria,42M22@68525|delta/epsilon subdivisions,2WM8F@28221|Deltaproteobacteria	28221|Deltaproteobacteria	NT	Chemotaxis sensory transducer	mcp64H-1	-	-	ko:K03406	ko02020,ko02030,map02020,map02030	-	-	-	ko00000,ko00001,ko02035	-	-	-	4HB_MCP_1,HAMP,MCPsignal,PAS_4,dCache_1
DYD3_k127_901717_18	1316927.ATKI01000087_gene2024	3.389e-27	115.0	COG2050@1|root,COG2050@2|Bacteria,1RGVP@1224|Proteobacteria,1S5WY@1236|Gammaproteobacteria,1YMAI@136843|Pseudomonas fluorescens group	1236|Gammaproteobacteria	Q	esterase	menI	GO:0003674,GO:0003824,GO:0006732,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009233,GO:0009234,GO:0009987,GO:0016289,GO:0016787,GO:0016788,GO:0016790,GO:0042180,GO:0042181,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0051186,GO:0051188,GO:0061522,GO:0071704,GO:1901576,GO:1901661,GO:1901663	3.1.2.28	ko:K19222	ko00130,ko01100,ko01110,map00130,map01100,map01110	M00116	R07262	RC00004,RC00174	ko00000,ko00001,ko00002,ko01000	-	-	-	4HBT
DYD3_k127_901717_7	1120999.JONM01000004_gene3482	8.187e-71	244.0	COG1881@1|root,COG1881@2|Bacteria,1N0Y4@1224|Proteobacteria,2VQJB@28216|Betaproteobacteria,2KR68@206351|Neisseriales	206351|Neisseriales	S	Phosphatidylethanolamine-binding protein	-	-	-	ko:K06910	-	-	-	-	ko00000	-	-	-	PBP
DYD3_k127_901717_22	381666.H16_A3669	8.518e-06	51.0	COG2608@1|root,COG2608@2|Bacteria,1NGBD@1224|Proteobacteria,2VXTQ@28216|Betaproteobacteria,1KA8C@119060|Burkholderiaceae	28216|Betaproteobacteria	P	heavy metal	copZ	-	-	ko:K07213	ko04978,map04978	-	-	-	ko00000,ko00001	-	-	-	HMA
DYD3_k127_901717_0	375286.mma_3525	2.537e-250	792.0	COG2217@1|root,COG2217@2|Bacteria,1MU08@1224|Proteobacteria,2VH8J@28216|Betaproteobacteria,472ZK@75682|Oxalobacteraceae	28216|Betaproteobacteria	P	heavy metal translocating P-type ATPase	copA	-	3.6.3.54	ko:K17686	ko01524,ko04016,map01524,map04016	-	R00086	RC00002	ko00000,ko00001,ko01000	3.A.3.5	-	-	E1-E2_ATPase,HMA,Hydrolase
DYD3_k127_901717_12	376733.IT41_15915	1.214e-43	162.0	COG0789@1|root,COG0789@2|Bacteria,1RGX6@1224|Proteobacteria,2U98F@28211|Alphaproteobacteria,2PXB9@265|Paracoccus	28211|Alphaproteobacteria	K	helix_turn_helix, mercury resistance	hmrR	-	-	ko:K19591	-	M00769	-	-	ko00000,ko00002,ko01504,ko03000	-	-	-	MerR,MerR-DNA-bind,MerR_1
DYD3_k127_901717_9	1184267.A11Q_1871	3.962e-64	231.0	COG1309@1|root,COG1309@2|Bacteria,1MUJ5@1224|Proteobacteria	1224|Proteobacteria	K	Represses the transcription of fabB, involved in unsaturated fatty acid (UFA) biosynthesis. By controlling UFA production, FabR directly influences the physical properties of the membrane bilayer	-	-	-	ko:K22105	-	-	-	-	ko00000,ko03000	-	-	-	TetR_N
DYD3_k127_901717_20	556269.ACDQ01000002_gene1108	1.06e-08	61.0	COG0783@1|root,COG0783@2|Bacteria,1RAC5@1224|Proteobacteria,2VM4X@28216|Betaproteobacteria,47492@75682|Oxalobacteraceae	28216|Betaproteobacteria	P	Belongs to the Dps family	dps	-	-	ko:K04047	-	-	-	-	ko00000,ko03036	-	-	-	Ferritin
DYD3_k127_901717_11	1232410.KI421426_gene1398	1.119e-47	174.0	COG1574@1|root,COG1574@2|Bacteria,1MWP2@1224|Proteobacteria,42SMD@68525|delta/epsilon subdivisions,2WPCI@28221|Deltaproteobacteria,43U6S@69541|Desulfuromonadales	28221|Deltaproteobacteria	S	Amidohydrolase family	-	-	-	-	-	-	-	-	-	-	-	-	Amidohydro_3
DYD3_k127_943050_9	1123278.KB893427_gene1237	4.217e-23	99.0	COG1670@1|root,COG1670@2|Bacteria,4P2PE@976|Bacteroidetes,47UMS@768503|Cytophagia	976|Bacteroidetes	J	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_943050_8	1237149.C900_03339	2.086e-38	150.0	COG0671@1|root,COG0671@2|Bacteria,4NNVQ@976|Bacteroidetes,47RBP@768503|Cytophagia	976|Bacteroidetes	I	PFAM PAP2 superfamily	ybjG	GO:0003674,GO:0003824,GO:0005975,GO:0006629,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009605,GO:0009607,GO:0009987,GO:0016051,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0019637,GO:0042578,GO:0043207,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044403,GO:0044413,GO:0044415,GO:0044419,GO:0046467,GO:0046493,GO:0050896,GO:0051701,GO:0051704,GO:0051707,GO:0051832,GO:0051834,GO:0052173,GO:0052200,GO:0071704,GO:0075136,GO:0090407,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509	3.6.1.27	ko:K19302	ko00550,map00550	-	R05627	RC00002	ko00000,ko00001,ko01000,ko01011	-	-	-	PAP2
DYD3_k127_943050_5	1313301.AUGC01000005_gene323	1.297e-66	233.0	COG0259@1|root,COG0259@2|Bacteria,4NFH7@976|Bacteroidetes	976|Bacteroidetes	H	Catalyzes the oxidation of either pyridoxine 5'- phosphate (PNP) or pyridoxamine 5'-phosphate (PMP) into pyridoxal 5'-phosphate (PLP)	pdxH	-	1.4.3.5	ko:K00275	ko00750,ko01100,ko01120,map00750,map01100,map01120	M00124	R00277,R00278,R01710,R01711	RC00048,RC00116	ko00000,ko00001,ko00002,ko01000	-	-	-	PNP_phzG_C,Putative_PNPOx
DYD3_k127_943050_10	1184267.A11Q_369	3.202e-15	77.0	2BQD7@1|root,32J8F@2|Bacteria,1Q26Q@1224|Proteobacteria,437TQ@68525|delta/epsilon subdivisions,2MUMU@213481|Bdellovibrionales,2X330@28221|Deltaproteobacteria	213481|Bdellovibrionales	S	Protein of unknown function (DUF1328)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1328
DYD3_k127_943050_4	1121456.ATVA01000017_gene252	2.822e-110	374.0	COG2204@1|root,COG2204@2|Bacteria,1MU0N@1224|Proteobacteria,42M03@68525|delta/epsilon subdivisions,2WIT0@28221|Deltaproteobacteria,2M8CJ@213115|Desulfovibrionales	28221|Deltaproteobacteria	T	Two component, sigma54 specific, transcriptional regulator, Fis family	-	-	-	ko:K02481	-	-	-	-	ko00000,ko02022	-	-	-	HTH_8,Response_reg,Sigma54_activat
DYD3_k127_943050_14	1304888.ATWF01000001_gene1255	1.274e-05	51.0	COG5002@1|root,COG5002@2|Bacteria	2|Bacteria	T	protein histidine kinase activity	-	-	-	-	-	-	-	-	-	-	-	-	AAA_16,CHASE,GAF,HAMP,HATPase_c,HisKA,Hpt,MASE1,PAS,PAS_3,PAS_4,PAS_8,PAS_9,Pkinase,Response_reg,dCache_1
DYD3_k127_943050_3	1071679.BG57_26280	4.978e-129	417.0	COG2518@1|root,COG2518@2|Bacteria,1NMMQ@1224|Proteobacteria,2VH3B@28216|Betaproteobacteria,1K3T9@119060|Burkholderiaceae	28216|Betaproteobacteria	O	Methyltransferase domain	-	-	-	-	-	-	-	-	-	-	-	-	Methyltransf_32
DYD3_k127_943050_12	264462.Bd1438	3.92e-11	66.0	2BQD7@1|root,32J8F@2|Bacteria,1Q26Q@1224|Proteobacteria,437TQ@68525|delta/epsilon subdivisions,2MUMU@213481|Bdellovibrionales,2X330@28221|Deltaproteobacteria	213481|Bdellovibrionales	S	Protein of unknown function (DUF1328)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1328
DYD3_k127_943050_11	377629.TERTU_4274	1.125e-11	73.0	COG3237@1|root,COG3237@2|Bacteria,1N6X4@1224|Proteobacteria,1SDHP@1236|Gammaproteobacteria,2PP18@256005|Alteromonadales genera incertae sedis	1236|Gammaproteobacteria	S	CsbD-like	yjbJ_1	-	-	-	-	-	-	-	-	-	-	-	CsbD
DYD3_k127_943050_0	1184267.A11Q_1230	1.826e-180	591.0	COG2352@1|root,COG2352@2|Bacteria,1MUD5@1224|Proteobacteria,42NS6@68525|delta/epsilon subdivisions,2MST4@213481|Bdellovibrionales,2WKYJ@28221|Deltaproteobacteria	213481|Bdellovibrionales	H	Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle	ppc	-	4.1.1.31	ko:K01595	ko00620,ko00680,ko00710,ko00720,ko01100,ko01120,ko01200,map00620,map00680,map00710,map00720,map01100,map01120,map01200	M00168,M00170,M00171,M00172,M00173,M00346,M00374	R00345	RC02741	ko00000,ko00001,ko00002,ko01000	-	-	-	PEPcase
DYD3_k127_943050_13	388399.SSE37_05937	6.12e-06	57.0	COG3409@1|root,COG3591@1|root,COG3409@2|Bacteria,COG3591@2|Bacteria,1NJBI@1224|Proteobacteria,2UKS7@28211|Alphaproteobacteria	28211|Alphaproteobacteria	E	COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain	-	-	-	-	-	-	-	-	-	-	-	-	Trypsin_2
DYD3_k127_943050_7	187303.BN69_3528	7.762e-47	174.0	COG3258@1|root,COG3258@2|Bacteria,1N1U2@1224|Proteobacteria,2U82E@28211|Alphaproteobacteria,3707W@31993|Methylocystaceae	28211|Alphaproteobacteria	C	Cytochrome c	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_943050_1	857087.Metme_0969	6.753e-171	542.0	COG1409@1|root,COG1409@2|Bacteria,1MUQJ@1224|Proteobacteria,1S12Q@1236|Gammaproteobacteria,1XEF7@135618|Methylococcales	135618|Methylococcales	S	Calcineurin-like phosphoesterase superfamily domain	-	-	-	-	-	-	-	-	-	-	-	-	Metallophos
DYD3_k127_943050_2	622637.KE124774_gene1140	1.695e-132	434.0	COG1858@1|root,COG1858@2|Bacteria,1MV70@1224|Proteobacteria,2TRTJ@28211|Alphaproteobacteria,36ZH1@31993|Methylocystaceae	28211|Alphaproteobacteria	P	Di-haem cytochrome c peroxidase	-	-	1.11.1.5	ko:K00428	-	-	-	-	ko00000,ko01000	-	-	-	CCP_MauG,Cytochrom_C
DYD3_k127_943050_6	765869.BDW_13275	3.953e-53	202.0	COG1287@1|root,COG1287@2|Bacteria,1P4UD@1224|Proteobacteria	1224|Proteobacteria	S	Dolichyl-phosphate-mannose-protein mannosyltransferase	-	-	-	-	-	-	-	-	-	-	-	-	PMT_2
DYD3_k127_943050_15	1227497.C491_08433	2.54e-05	55.0	COG0508@1|root,arCOG02700@1|root,arCOG01706@2157|Archaea,arCOG02700@2157|Archaea,2XTSS@28890|Euryarchaeota,23RYB@183963|Halobacteria	183963|Halobacteria	C	COG0508 Pyruvate 2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes	-	-	2.3.1.12	ko:K00627	ko00010,ko00020,ko00620,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00020,map00620,map01100,map01110,map01120,map01130,map01200	M00307	R00209,R02569	RC00004,RC02742,RC02857	br01601,ko00000,ko00001,ko00002,ko01000	-	-	-	2-oxoacid_dh,Biotin_lipoyl,E3_binding
DYD3_k127_952726_10	1250006.JHZZ01000001_gene3042	3.029e-09	62.0	COG1409@1|root,COG1409@2|Bacteria,4NGXX@976|Bacteroidetes,1II3B@117743|Flavobacteriia,3VWZV@52959|Polaribacter	976|Bacteroidetes	S	Calcineurin-like phosphoesterase superfamily domain	-	-	-	-	-	-	-	-	-	-	-	-	Metallophos
DYD3_k127_952726_0	1201288.M900_1016	3.98e-320	988.0	COG1032@1|root,COG1032@2|Bacteria,1MUG3@1224|Proteobacteria,42N0P@68525|delta/epsilon subdivisions,2WJCQ@28221|Deltaproteobacteria	28221|Deltaproteobacteria	C	SMART Elongator protein 3 MiaB NifB	-	-	-	-	-	-	-	-	-	-	-	-	DUF3362,Radical_SAM,Radical_SAM_N
DYD3_k127_952726_7	1201288.M900_1289	1.117e-22	112.0	COG2206@1|root,COG2206@2|Bacteria	2|Bacteria	T	PFAM metal-dependent phosphohydrolase, HD sub domain	cnpD3	-	3.6.1.11,3.6.1.40	ko:K01524,ko:K07016	ko00230,map00230	-	R03409	RC00002	ko00000,ko00001,ko01000,ko02048	-	-	-	HD,HD_5
DYD3_k127_952726_3	1123499.KB908025_gene1529	5.221e-46	173.0	COG0204@1|root,COG0204@2|Bacteria,1RJMS@1224|Proteobacteria,2VPJM@28216|Betaproteobacteria,2KRKJ@206351|Neisseriales	206351|Neisseriales	I	Phosphate acyltransferases	-	-	-	-	-	-	-	-	-	-	-	-	Acyltransferase
DYD3_k127_952726_8	1121374.KB891588_gene3340	7.139e-18	90.0	COG2827@1|root,COG2827@2|Bacteria,1N6PA@1224|Proteobacteria,1SCBH@1236|Gammaproteobacteria	1236|Gammaproteobacteria	L	endonuclease containing a URI domain	yhbQ	GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004520,GO:0004527,GO:0004529,GO:0004536,GO:0006139,GO:0006259,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008296,GO:0008408,GO:0009987,GO:0016787,GO:0016788,GO:0016796,GO:0016895,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0071704,GO:0090304,GO:0090305,GO:0140097,GO:1901360	-	ko:K07461	-	-	-	-	ko00000	-	-	-	GIY-YIG
DYD3_k127_952726_5	1201288.M900_0985	3.373e-31	130.0	COG1186@1|root,COG1186@2|Bacteria,1RH75@1224|Proteobacteria,42VTR@68525|delta/epsilon subdivisions,2X5PP@28221|Deltaproteobacteria	28221|Deltaproteobacteria	J	PFAM Class I peptide chain release factor	-	-	-	ko:K15034	-	-	-	-	ko00000,ko03012	-	-	-	RF-1
DYD3_k127_952726_1	641107.CDLVIII_5934	7.389e-104	354.0	COG2317@1|root,COG2317@2|Bacteria,1TPS6@1239|Firmicutes,249NK@186801|Clostridia,36F32@31979|Clostridiaceae	186801|Clostridia	E	Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues	-	-	3.4.17.19	ko:K01299	-	-	-	-	ko00000,ko01000,ko01002	-	-	-	Peptidase_M32
DYD3_k127_952726_4	1230343.CANP01000028_gene2119	5.337e-40	151.0	COG1393@1|root,COG1393@2|Bacteria,1QBJH@1224|Proteobacteria,1T754@1236|Gammaproteobacteria,1JEWB@118969|Legionellales	118969|Legionellales	P	ArsC family	-	-	-	-	-	-	-	-	-	-	-	-	ArsC
DYD3_k127_952726_6	1128421.JAGA01000003_gene3728	9.103e-28	117.0	COG0745@1|root,COG0745@2|Bacteria	1128421.JAGA01000003_gene3728|-	T	phosphorelay signal transduction system	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_952726_9	1137281.D778_02505	4.718e-11	70.0	COG3663@1|root,COG3663@2|Bacteria,4NEZ4@976|Bacteroidetes,1HY0W@117743|Flavobacteriia	976|Bacteroidetes	L	G T U mismatch-specific DNA glycosylase	-	-	-	-	-	-	-	-	-	-	-	-	-
DYD3_k127_952726_2	378806.STAUR_7606	4.352e-71	271.0	COG0642@1|root,COG2203@1|root,COG3829@1|root,COG2203@2|Bacteria,COG2205@2|Bacteria,COG3829@2|Bacteria,1NRP8@1224|Proteobacteria,430R6@68525|delta/epsilon subdivisions,2WVZ1@28221|Deltaproteobacteria	28221|Deltaproteobacteria	T	Domain present in phytochromes and cGMP-specific phosphodiesterases.	-	-	-	-	-	-	-	-	-	-	-	-	GAF,GAF_2,HATPase_c,HisKA,PAS_4
DYD3_k127_99187_4	411154.GFO_3149	7.826e-61	213.0	COG1053@1|root,COG1053@2|Bacteria,4NFDU@976|Bacteroidetes,1HWUS@117743|Flavobacteriia	976|Bacteroidetes	C	SdhA B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC D which are the membrane components and form cytochrome b556	sdhA	-	1.3.5.1,1.3.5.4	ko:K00239	ko00020,ko00190,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko05134,map00020,map00190,map00650,map00720,map01100,map01110,map01120,map01130,map01200,map05134	M00009,M00011,M00149,M00173,M00374,M00376	R02164	RC00045	ko00000,ko00001,ko00002,ko01000	-	-	-	FAD_binding_2,Succ_DH_flav_C
DYD3_k127_99187_0	862908.BMS_2198	2.109e-112	368.0	COG0479@1|root,COG0479@2|Bacteria,1MVHS@1224|Proteobacteria,42M2J@68525|delta/epsilon subdivisions,2MSSP@213481|Bdellovibrionales,2WK9D@28221|Deltaproteobacteria	213481|Bdellovibrionales	C	TIGRFAM succinate dehydrogenase and fumarate reductase iron-sulfur protein	frdB	-	1.3.5.1,1.3.5.4	ko:K00240,ko:K00245	ko00020,ko00190,ko00620,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko02020,map00020,map00190,map00620,map00650,map00720,map01100,map01110,map01120,map01130,map01200,map02020	M00009,M00011,M00149,M00150,M00173,M00374,M00376	R02164	RC00045	ko00000,ko00001,ko00002,ko01000	-	-	iAF987.Gmet_2395	Fer2_3,Fer4_7,Fer4_8
DYD3_k127_99187_1	765869.BDW_01540	6.151e-85	289.0	COG5006@1|root,COG5006@2|Bacteria,1MXR7@1224|Proteobacteria,437J8@68525|delta/epsilon subdivisions,2MTWF@213481|Bdellovibrionales,2X2T8@28221|Deltaproteobacteria	213481|Bdellovibrionales	S	EamA-like transporter family	-	-	-	ko:K11939	-	-	-	-	ko00000,ko02000	2.A.7.3.6	-	-	EamA
DYD3_k127_99187_3	1250278.JQNQ01000001_gene536	4.613e-63	229.0	COG3540@1|root,COG3540@2|Bacteria,4NDUS@976|Bacteroidetes,1HYTM@117743|Flavobacteriia	976|Bacteroidetes	P	COG3540 Phosphodiesterase alkaline phosphatase D	phoD	-	3.1.3.1	ko:K01113	ko00790,ko01100,ko02020,map00790,map01100,map02020	M00126	R04620	RC00017	ko00000,ko00001,ko00002,ko01000	-	-	-	PhoD
DYD3_k127_99187_2	1158345.JNLL01000001_gene1098	1.991e-80	282.0	COG3746@1|root,COG3746@2|Bacteria	2|Bacteria	-	-	-	-	-	ko:K07221	-	-	-	-	ko00000,ko02000	1.B.5.1	-	-	Porin_O_P
## 3382 queries scanned
## Total time (seconds): 8.453383684158325
## Rate: 400.08 q/s